HHsearch results for GI: 254780252 and protein with PDBid: 2vqe_Q
>2vqe_Q 30S ribosomal protein S17; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: b.40.4.5 PDB: 1gix_T* 1hnw_Q* 1hnx_Q* 1hnz_Q* 1hr0_Q 1ibk_Q* 1ibl_Q* 1ibm_Q 1jgo_T* 1jgp_T* 1jgq_T* 1ml5_T* 1xmo_Q* 1xmq_Q* 1xnq_Q* 1xnr_Q* 1yl4_T 2b64_Q* 2b9m_Q* 2b9o_Q* ...
Probab=100.00 E-value=3.6e-33 Score=201.64 Aligned_cols=77 Identities=57% Similarity=0.896 Sum_probs=76.0
Q ss_pred CCCEEEEEEEEEECCCCEEEEEEEEEEECCCCCEEECCCEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEE
Q ss_conf 97347999999608986199999718878641308735103898688660406878999963775432039999764
Q gi|254780252|r 1 MPKRVLQGMVVSDKSEKTIIVLVERRFSHPRFQKTIRRSKRYAVHDENNKYKVGDFVSIEESAPISKKKSWLVIDSE 77 (79)
Q Consensus 1 m~~k~l~G~Vvs~km~KTv~V~v~r~~~~~ky~K~~~~~kk~~vHD~~~~~~~GD~V~i~e~rPiSK~K~~~vve~~ 77 (79)
||+|+|.|+|+|++|+||++|.++|+++||+|+|+++++++|+||||+|+|++||+|+|.|||||||+|+|+|+|+.
T Consensus 1 M~kk~l~G~Vvs~km~KTv~V~V~r~~~h~ky~K~~kr~kk~~aHDe~~~~~~GD~V~I~e~rPlSK~K~~~v~~I~ 77 (105)
T 2vqe_Q 1 MPKKVLTGVVVSDKMQKTVTVLVERQFPHPLYGKVIKRSKKYLAHDPEEKYKLGDVVEIIESRPISKRKRFRVLRLV 77 (105)
T ss_dssp -CCCEEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEEEEEECTTCCCCTTCEEEEEEEEEEETTEEEEEEEEE
T ss_pred CCCEEEEEEEEEECCCCCEEEEEEEEEECCCCCEEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCEEEEEEEEE
T ss_conf 99608999999407997299999999973876779885559999998998999989999988778896879999998