HHSEARCH alignment of GI: 254780252 and SCOP domain: d2gy9q1

Alignment

Probab=99.97  E-value=1.2e-30  Score=186.55  Aligned_cols=75  Identities=49%  Similarity=0.776  Sum_probs=72.9

Q ss_pred             EEEEEEEEEECCCCEEEEEEEEEEECCCCCEEECCCEEEEECCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEE
Q ss_conf             479999996089861999997188786413087351038986886604068789999637754320399997640
Q gi|254780252|r    4 RVLQGMVVSDKSEKTIIVLVERRFSHPRFQKTIRRSKRYAVHDENNKYKVGDFVSIEESAPISKKKSWLVIDSEG   78 (79)
Q Consensus         4 k~l~G~Vvs~km~KTv~V~v~r~~~~~ky~K~~~~~kk~~vHD~~~~~~~GD~V~i~e~rPiSK~K~~~vve~~~   78 (79)
                      ++|.|+|+|++|+||++|+++|+++||+|+|+++++++|+||||+|+|++||.|.|+|||||||+|+|.|+|+..
T Consensus         1 r~l~G~Vvs~km~KTv~V~v~r~~~h~ky~K~~~~~kky~aHDe~~~~~~GD~V~I~e~rPlSK~K~~~v~~iv~   75 (78)
T d2gy9q1           1 RTLQGRVVSDKMEKSIVVAIERFVKHPIYGKFIKRTTKLHVHDENNECGIGDVVEIRECRPLSKTKSWTLVRVVE   75 (78)
T ss_dssp             CEEEEEEEECCSSSEEEEEEEEEEECSSSCCEEEEEEEEEEECTTCCCCTTCEEEEEECSCSSSSCCEEEEEEEE
T ss_pred             CEEEEEEEECCCCCCEEEEEEEEEECCCCCEEEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEE
T ss_conf             979999996689971999999999758667898853799999989777646499999867689928799999991

SCOP domain information

class: All beta proteins
fold: OB-fold
superfamily: Nucleic acid-binding proteins
family: Cold shock DNA-binding domain-like
domain: Ribosomal protein S17
species: Escherichia coli [TaxId: 562]