HHsearch alignment of GI: 254780253 and MMDB domain: 1vq8_V_
>1vq8_V (V:) 50S ribosomal protein L29P; ribosome 50S, protein-protein complex, RNA-RNA complex, protein-RNA complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui}
Probab=99.81 E-value=7.6e-20 Score=138.75 Aligned_cols=66 Identities=30% Similarity=0.405 Sum_probs=63.8
Q ss_pred CCCHHHHHHCCHHHHHHHHHHHHHHHHHHH-HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 988899972999999999999999999999-999537865469999999999999999999998532
Q gi|254780253|r 1 MLKFKDISVMSIDQLTEKLIQLKKDQMSLR-FQKASGQIEKPFRMREVSRDIARIKTMMNSRVFKNN 66 (67)
Q Consensus 1 mmk~~elr~~s~~eL~~~l~~l~~el~~lr-fq~~~gql~np~~ir~~Rk~IARi~Tvl~er~~~~~ 66 (67)
|||++|||++|++||.+.+.+++.+||+|| ||+++|+++|||+|+.+||+||||+||++|+..++.
T Consensus 3 ~mk~~elr~~s~eeL~~~l~elk~elf~LR~~q~a~g~l~n~~~i~~~Rr~IARi~Til~er~~~~~ 69 (71)
T 1vq8_V 3 VLHVQEIRDMTPAEREAELDDLKTELLNARAVQAAGGAPENPGRIKELRKAIARIKTIQGEEGDLQE 69 (71)
T ss_dssp CSCHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHTC---
T ss_pred CCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 5769999869999999999999999999999999718877708999999999999999999986052