HHsearch alignment for GI: 254780254 and conserved domain: CHL00044

Probab=100.00  E-value=0  Score=375.99  Aligned_cols=135  Identities=52%  Similarity=0.934  Sum_probs=134.0

Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCEEECCCEEECHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCC
Q ss_conf             98887755106789897234778753121310327405313259999999999997426784689875498607862154
Q gi|254780254|r    2 LRQPKNTKYPKQFKGRIKGVAKGGSRICFGNFALKAQEANRIGSSEIEAARRAISRGMKRAGRVWICVFPDVPVTAKPTE   81 (138)
Q Consensus         2 ml~Pk~~KyrK~~kgr~~g~~~~~~~l~fG~yGL~a~e~g~it~~qiEaaR~~i~R~lkk~gkiwirv~P~~pvTkKp~e   81 (138)
T Consensus         1 mL~Pkr~K~rK~~kgr~~G~~~~g~~l~fG~yGLkale~g~it~~qiEa~R~~i~R~ikr~gk~wirvfP~~pvT~Kp~e   80 (136)
T CHL00044          1 MLSPKRTKFRKQHRGRMKGISYRGNRICFGRYALQALEPAWITSRQIEAGRRAMTRYARRGGKIWIRIFPDKPVTVRPAE   80 (136)
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCEECHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEECCCC
T ss_conf             98888674245467888875778888864015678860880469999999999999864276299996899651306622


Q ss_pred             CCCCCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEE
Q ss_conf             4001447881106998321508999749799999999999854389517999986
Q gi|254780254|r   82 VRMGKGKGNVEKWVCRVKPGRILFEIDGVSEEVARRAFRLGAAKLSVVTKFIQRV  136 (138)
Q Consensus        82 ~RMGkGKG~~~~wv~~Vk~G~ilfEi~gi~~~~a~~al~~a~~KLP~k~k~i~k~  136 (138)
T Consensus        81 ~RMGkGKG~~~~wv~~Vk~G~IlFEi~gv~~~~a~~al~~aa~KLP~k~k~I~k~  135 (136)
T CHL00044         81 TRMGSGKGSPEYWVAVVKPGRILYEMGGVSENIARAAIKIAAYKMPIKTQFIISE  135 (136)
T ss_pred             CCCCCCCCCHHHEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECC
T ss_conf             5477887885367999679969999689999999999999975289607998637