HHsearch alignment of GI: 254780254 and MMDB domain: 3i1n_M_
>3i1n_M (M:) 50S ribosomal protein L16; ribosome structure, protein-RNA complex, acetylation, ribonucleoprotein, ribosomal protein, RNA-binding, rRNA- binding, methylation; 3.19A {Escherichia coli k-12} PDB: 1p85_K 1p86_K 1vs8_M 2aw4_M 2awb_M 1vs6_M 2i2v_M 2j28_M 2i2t_M* 2qao_M* 2qba_M* 2qbc_M* 2qbe_M 2qbg_M 2qbi_M* 2qbk_M* 2qov_M 2qox_M 2qoz_M* 2qp1_M* ...
Probab=100.00 E-value=0 Score=304.73 Aligned_cols=135 Identities=54% Similarity=0.968 Sum_probs=131.7
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCEEECCCEEECHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEECCC
Q ss_conf 98887755106789897234778753121310327405313259999999999997426784689875498607862154
Q gi|254780254|r 2 LRQPKNTKYPKQFKGRIKGVAKGGSRICFGNFALKAQEANRIGSSEIEAARRAISRGMKRAGRVWICVFPDVPVTAKPTE 81 (138)
Q Consensus 2 ml~Pk~~KyrK~~kgr~~g~~~~~~~l~fG~yGL~a~e~g~it~~qiEaaR~~i~R~lkk~gkiwirv~P~~pvTkKp~e 81 (138)
||+|++++|+|+|++++.+ .+.+|.|.||+|||+|+|+++|+++||||+|++|+|+|++.|++|++++||.|+|+||+|
T Consensus 1 ml~pk~~k~~k~~~~ki~~-~~~gn~l~~g~~gl~a~e~~~i~~~~lEa~R~~i~r~lk~~~~~~~~~~~~~~vt~k~~~ 79 (136)
T 3i1n_M 1 MLQPKRTKFRKMHKGRNRG-LAQGTDVSFGSFGLKAVGRGRLTARQIEAARRAMTRAVKRQGKIWIRVFPDKPITEKPLA 79 (136)
T ss_dssp CCCCSCCSCSCCCCCCCCS-CCSSCSCCSSSEEEECCSCEEECSHHHHHHHHHHHHHHCSCSCEEECCCCCBCCEECCSS
T ss_pred CCCCCCCCCCCCCCCCCCC-CCCCCCEECCEEEEEECCCCEECHHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEECCCC
T ss_conf 9888767313566899977-576871100036058885871679999999999997434486599985286889933145
Q ss_pred CCCCCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEEEEC
Q ss_conf 40014478811069983215089997497999999999998543895179999862
Q gi|254780254|r 82 VRMGKGKGNVEKWVCRVKPGRILFEIDGVSEEVARRAFRLGAAKLSVVTKFIQRVV 137 (138)
Q Consensus 82 ~RMGkGKG~~~~wv~~Vk~G~ilfEi~gi~~~~a~~al~~a~~KLP~k~k~i~k~~ 137 (138)
+|||+|||+++||||+|++|+||||++++++++|++||++|++|||++|+||.+++
T Consensus 80 ~rMG~GkG~~~~~~arV~~G~iifei~~~~~~~a~~al~~a~~KLP~~~~iv~~~~ 135 (136)
T 3i1n_M 80 VRMGKGKGNVEYWVALIQPGKVLYEMDGVPEELAREAFKLAAAKLPIKTTFVTKTV 135 (136)
T ss_dssp CCSCSSCCEECCCBEEECTTCEEEEECSSCHHHHHHHHHHHHHHCSSCCEEEECCC
T ss_pred CCCCCCCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEEEC
T ss_conf 60368978871689997589489996698999999999999871898779998625