HHSEARCH alignment of GI: 254780254 and SCOP domain: d2pa2a1

Alignment
>d2pa2a1 d.41.4.1 (A:40-176) Ribosomal protein L10e {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.7e-36  Score=226.65  Aligned_cols=102  Identities=21%  Similarity=0.197  Sum_probs=95.2

Q ss_pred             CCEEECCCEEECHHHHHHHHHHHHHHC-----CCCCEEEEEECCCCEEEEECCCCCCC---------CCCCCCCEEEEEE
Q ss_conf             032740531325999999999999742-----67846898754986078621544001---------4478811069983
Q gi|254780254|r   33 FALKAQEANRIGSSEIEAARRAISRGM-----KRAGRVWICVFPDVPVTAKPTEVRMG---------KGKGNVEKWVCRV   98 (138)
Q Consensus        33 yGL~a~e~g~it~~qiEaaR~~i~R~l-----kk~gkiwirv~P~~pvTkKp~e~RMG---------kGKG~~~~wv~~V   98 (138)
                      ..|+++|+++|+++||||||++|+|+|     ++++++|||+|||+|+|.||.++|||         +|||++++|||+|
T Consensus        11 ~~L~~~e~~~i~~~~iEAaR~ai~r~l~k~~gk~~~~~~irvfP~~~l~~k~~~~~~Gadr~~~gMrkgkG~p~~waArV   90 (137)
T d2pa2a1          11 GHMVSDEYEQLSSEALEAARICANKYMVKSCGKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARV   90 (137)
T ss_dssp             EEEEECSCEEEEHHHHHHHHHHHHHHHHHHHCTTSEEEEECCSCC-----------------------------CCEEEE
T ss_pred             EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEECCHHCCCCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf             99998676321688999999999998887526577479999768830660601202565421223446768855899995


Q ss_pred             CCCEEEEEECCC--CHHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf             215089997497--999999999998543895179999
Q gi|254780254|r   99 KPGRILFEIDGV--SEEVARRAFRLGAAKLSVVTKFIQ  134 (138)
Q Consensus        99 k~G~ilfEi~gi--~~~~a~~al~~a~~KLP~k~k~i~  134 (138)
                      ++|+||||+++.  +.+.|++||++|++|||++|+|+-
T Consensus        91 k~G~ilfEi~g~~~~~~~Ak~ALr~Aa~KLP~~tkIvv  128 (137)
T d2pa2a1          91 HIGQVIMSIRTKLQNKEHVIEALRRAKFKFPGRQKIHI  128 (137)
T ss_dssp             CTTBEEEEEEECGGGHHHHHHHHHHHGGGSSSCEEEEE
T ss_pred             CCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEE
T ss_conf             38968999850255899999999987312899679999


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: alpha/beta-Hammerhead
superfamily: Ribosomal protein L16p/L10e
family: Ribosomal protein L10e
domain: Ribosomal protein L10e
species: Human (Homo sapiens) [TaxId: 9606]