RPSBLAST alignment of GI: 254780254 and protein with PDBid: 1ffk

>1ffk_F Ribosomal protein L10E; ribosome assembly, RNA-RNA, protein-RNA, protein-protein; 2.40A {Haloarcula marismortui} SCOP: d.41.4.1 PDB: 1jj2_H 1k73_J* 1k8a_J* 1k9m_J* 1kc8_J* 1kd1_J* 1kqs_H* 1m1k_J* 1m90_J* 1n8r_J* 1nji_J* 1q7y_J* 1q81_J* 1q82_J* 1q86_J* 1qvf_H 1qvg_H 1w2b_H 3cxc_H* 1giy_P ... Length = 157

 Score =  103 bits (258), Expect = 2e-23
 Identities = 25/149 (16%), Positives = 45/149 (30%), Gaps = 15/149 (10%)

Query: 1   MLRQPKNTKYPK-QFKGRIKGVA----KGGSRICFGNF----ALKAQEANRIGSSEIEAA 51
             R      Y + ++   I G      K G+      +        ++  +I  + +EAA
Sbjct: 5   HFRNSIKPAYTRREYISGIPGKGIAQFKMGNNGAGPTYPAQVENVVEKPVQIRHNALEAA 64

Query: 52  RRAISRGMKRAG-----RVWICVFPDVPVTAKPTEVRMGKGKGNVEKWVCRVKPGRILFE 106
           R A +R ++ +G     +  I  FP   V  +     M    G       R       F 
Sbjct: 65  RNAANRFVQNSGAAANYKFRIRKFPF-HVIREQDGDGMRAPFGKSVGTAARSHGANHDFI 123

Query: 107 IDGVSEEVARRAFRLGAAKLSVVTKFIQR 135
                +     A+R    K++        
Sbjct: 124 AWVNPDPAVEFAWRRAYMKVTPTVNIDSS 152