RPSBLAST alignment of GI: 254780254 and protein with PDBid: 3ofq
>3ofq_M 50S ribosomal protein L16; protein biosynthesis, ribosomes, RNA, tRNA, transfer, antibi EXIT, peptidyl, ribosomal subunit, large; 3.10A {Escherichia coli} PDB: 1p85_K 1p86_K 1vs8_M 1vs6_M 2aw4_M 2awb_M 1vt2_M 2i2v_M 2j28_M 2i2t_M* 2qao_M* 2qba_M* 2qbc_M* 2qbe_M 2qbg_M 2qbi_M* 2qbk_M* 2qov_M 2qox_M 2qoz_M* ... Length = 136
Score = 181 bits (460), Expect = 6e-47
Identities = 76/137 (55%), Positives = 103/137 (75%), Gaps = 2/137 (1%)
Query: 1 MLRQPKNTKYPKQFKGRIKGVAKGGSRICFGNFALKAQEANRIGSSEIEAARRAISRGMK 60
ML QPK TK+ K KGR +G+A+G + + FG+F LKA R+ + +IEAARRA++R +K
Sbjct: 1 ML-QPKRTKFRKMHKGRNRGLAQG-TDVSFGSFGLKAVGRGRLTARQIEAARRAMTRAVK 58
Query: 61 RAGRVWICVFPDVPVTAKPTEVRMGKGKGNVEKWVCRVKPGRILFEIDGVSEEVARRAFR 120
R G++WI VFPD P+T KP VRMGKGKGNVE WV ++PG++L+E+DGV EE+AR AF+
Sbjct: 59 RQGKIWIRVFPDKPITEKPLAVRMGKGKGNVEYWVALIQPGKVLYEMDGVPEELAREAFK 118
Query: 121 LGAAKLSVVTKFIQRVV 137
L AAKL + T F+ + V
Sbjct: 119 LAAAKLPIKTTFVTKTV 135