HHsearch alignment for GI: 254780255 and conserved domain: PRK00310
>PRK00310 rpsC 30S ribosomal protein S3; Reviewed.
Probab=100.00 E-value=0 Score=577.45 Aligned_cols=213 Identities=57% Similarity=0.952 Sum_probs=207.9
Q ss_pred CCCCCCCCEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCCCCCCC
Q ss_conf 98645785266503206215670273125799998999999999877422642215532588518999973741001356
Q gi|254780255|r 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKK 80 (227)
Q Consensus 1 MGQKvnP~g~RLg~~k~w~S~Wfa~~k~Y~~~L~eD~~IR~fi~k~l~~agis~i~I~Rt~~~i~I~I~~~kP~~iiGkk 80 (227)
T Consensus 1 MGQKvnP~GfRLGi~k~w~S~Wfa~~k~Y~~~L~eD~kIR~yi~k~~~~agIs~I~IeR~~~~i~V~I~tarPgiiIGkk 80 (233)
T PRK00310 1 MGQKVNPIGFRLGITKDWDSRWYADKKDYADLLHEDLKIRKFLKKKLKKAGVSRIVIERPAKKVRVTIHTARPGIVIGKK 80 (233)
T ss_pred CCCCCCCCCEEECCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHCHHCCEEEEEEEECCCEEEEEEEECCCCCHHCCC
T ss_conf 98988983353145679977187882454799999999999997501015724899997388799999967886312156
Q ss_pred CHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCC
Q ss_conf 53489989876403587057879981375533778799999998759636899999999853238855999970367864
Q gi|254780255|r 81 GTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGA 160 (227)
Q Consensus 81 g~~i~~l~~~L~~~~~~~v~i~v~ei~~p~~~A~~iA~~Ia~~Lekr~~fRr~~k~~i~~~~k~g~kGikI~isGRl~G~ 160 (227)
T Consensus 81 G~~Ie~L~~~L~k~~~~~v~InI~EVk~Pe~~A~lvA~~IA~qLE~Rv~FRra~K~ai~~~~k~gakGIKI~isGRL~Ga 160 (233)
T PRK00310 81 GEDIEKLRKELQKLTGKPVQINIVEVKKPELDAQLVAESIAQQLERRVSFRRAMKRAIQRAMRAGAKGIKIQVSGRLGGA 160 (233)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCEEHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCC
T ss_conf 63689999999997489538999996054403050399999858603289999999999999759984699982475773
Q ss_pred CCCEEEEEEECCCCCCCEEEECEEEEEEEEECCCEEEEEEEEEECCCCCCCCC
Q ss_conf 22215787525532452000030568999953826679999732885377211
Q gi|254780255|r 161 ELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213 (227)
Q Consensus 161 e~Ar~e~~~~G~vpl~t~~a~idy~~~~a~T~~G~~GvKVwi~~~~~~~~~~~ 213 (227)
T Consensus 161 EiAR~E~~~eGrvPL~Tlra~IDY~~~~A~T~yGiiGVKVWi~~ge~~~~~~~ 213 (233)
T PRK00310 161 EIARTEWYREGRVPLHTLRADIDYATAEAHTTYGVIGVKVWIFKGEVLGGPRA 213 (233)
T ss_pred CHHHEEEEEECEEECHHEEECCCEEEEEEECCCCCEEEEEEEECCCCCCCCCC
T ss_conf 01005658723463230143363899899868621799999987750698641