HHsearch alignment for GI: 254780255 and conserved domain: PRK04191

>PRK04191 rps3p 30S ribosomal protein S3P; Reviewed.
Probab=100.00  E-value=0  Score=411.51  Aligned_cols=195  Identities=32%  Similarity=0.498  Sum_probs=187.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCC-CEEEEEE
Q ss_conf             731257999989999999998774226422155325885189999737410013565348998987640358-7057879
Q gi|254780255|r   25 RGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSV  103 (227)
Q Consensus        25 ~~k~Y~~~L~eD~~IR~fi~k~l~~agis~i~I~Rt~~~i~I~I~~~kP~~iiGkkg~~i~~l~~~L~~~~~-~~v~i~v  103 (227)
T Consensus         3 i~k~fi~~~~~~~~Ireyl~k~l~~Agis~IeIeRt~~~~~I~I~tarPG~vIGr~G~~i~~L~~~L~k~~~~~~~~I~V   82 (225)
T PRK04191          3 IEKKFVQEGVKKTLIDEYLAKELERAGYGGMEIKKTPLGTRITIYAERPGMVIGRGGKTIRELTETLEKKFGLENPQIDV   82 (225)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECCCCEEECCCHHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf             56899983028999999999877767854599998689469999948985155578377999999999983999744999


Q ss_pred             EEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEEEECCCCC--CCEEEE
Q ss_conf             981375533778799999998759636899999999853238855999970367864222157875255324--520000
Q gi|254780255|r  104 NEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPL--QTLRAH  181 (227)
Q Consensus       104 ~ei~~p~~~A~~iA~~Ia~~Lekr~~fRr~~k~~i~~~~k~g~kGikI~isGRl~G~e~Ar~e~~~~G~vpl--~t~~a~  181 (227)
T Consensus        83 ~EV~~P~l~A~lvAe~IA~qLErr~~fRRa~k~ai~~~m~aGAkGikI~iSGRL~G-E~ARtE~~~eG~vplsG~~~~~~  161 (225)
T PRK04191         83 KEVENPELNARVVAFRIANALERGWHFRRAAHSAIRRIMEAGAKGVEIIISGKLTG-ERARFEKFMEGYIKKSGEPAEEL  161 (225)
T ss_pred             EEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCH-HHHHHHHHHCCEEECCCCCCHHH
T ss_conf             99518774889999999999862428999999999999974897689998056348-88776687377646689830652


Q ss_pred             CEEEEEEEEECCCEEEEEEEEEECCCCCCCCCCCCCCHH
Q ss_conf             305689999538266799997328853772113433202
Q gi|254780255|r  182 IDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH  220 (227)
Q Consensus       182 idy~~~~a~T~~G~~GvKVwi~~~~~~~~~~~~~~~~~~  220 (227)
T Consensus       162 IDya~~~A~tk~GviGVKVwI~k~~~~~pd~~~i~~~~~  200 (225)
T PRK04191        162 VDRGFAIAKLKLGIIGVTVRIMPPDVKLPDEIEIKEPEE  200 (225)
T ss_pred             EEEEEEEEECCCEEEEEEEEEECCCCCCCCEEEEECCCC
T ss_conf             135899995587048899999899977998799848775