HHsearch alignment for GI: 254780255 and conserved domain: PRK04191
>PRK04191 rps3p 30S ribosomal protein S3P; Reviewed.
Probab=100.00 E-value=0 Score=411.51 Aligned_cols=195 Identities=32% Similarity=0.498 Sum_probs=187.1
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCC-CEEEEEE
Q ss_conf 731257999989999999998774226422155325885189999737410013565348998987640358-7057879
Q gi|254780255|r 25 RGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSV 103 (227)
Q Consensus 25 ~~k~Y~~~L~eD~~IR~fi~k~l~~agis~i~I~Rt~~~i~I~I~~~kP~~iiGkkg~~i~~l~~~L~~~~~-~~v~i~v 103 (227)
T Consensus 3 i~k~fi~~~~~~~~Ireyl~k~l~~Agis~IeIeRt~~~~~I~I~tarPG~vIGr~G~~i~~L~~~L~k~~~~~~~~I~V 82 (225)
T PRK04191 3 IEKKFVQEGVKKTLIDEYLAKELERAGYGGMEIKKTPLGTRITIYAERPGMVIGRGGKTIRELTETLEKKFGLENPQIDV 82 (225)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECCCCEEECCCHHHHHHHHHHHHHHHCCCCCEEEE
T ss_conf 56899983028999999999877767854599998689469999948985155578377999999999983999744999
Q ss_pred EEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEEEECCCCC--CCEEEE
Q ss_conf 981375533778799999998759636899999999853238855999970367864222157875255324--520000
Q gi|254780255|r 104 NEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPL--QTLRAH 181 (227)
Q Consensus 104 ~ei~~p~~~A~~iA~~Ia~~Lekr~~fRr~~k~~i~~~~k~g~kGikI~isGRl~G~e~Ar~e~~~~G~vpl--~t~~a~ 181 (227)
T Consensus 83 ~EV~~P~l~A~lvAe~IA~qLErr~~fRRa~k~ai~~~m~aGAkGikI~iSGRL~G-E~ARtE~~~eG~vplsG~~~~~~ 161 (225)
T PRK04191 83 KEVENPELNARVVAFRIANALERGWHFRRAAHSAIRRIMEAGAKGVEIIISGKLTG-ERARFEKFMEGYIKKSGEPAEEL 161 (225)
T ss_pred EEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCH-HHHHHHHHHCCEEECCCCCCHHH
T ss_conf 99518774889999999999862428999999999999974897689998056348-88776687377646689830652
Q ss_pred CEEEEEEEEECCCEEEEEEEEEECCCCCCCCCCCCCCHH
Q ss_conf 305689999538266799997328853772113433202
Q gi|254780255|r 182 IDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220 (227)
Q Consensus 182 idy~~~~a~T~~G~~GvKVwi~~~~~~~~~~~~~~~~~~ 220 (227)
T Consensus 162 IDya~~~A~tk~GviGVKVwI~k~~~~~pd~~~i~~~~~ 200 (225)
T PRK04191 162 VDRGFAIAKLKLGIIGVTVRIMPPDVKLPDEIEIKEPEE 200 (225)
T ss_pred EEEEEEEEECCCEEEEEEEEEECCCCCCCCEEEEECCCC
T ss_conf 135899995587048899999899977998799848775