HHsearch alignment for GI: 254780255 and conserved domain: pfam00417

>pfam00417 Ribosomal_S3_N Ribosomal protein S3, N-terminal domain. This family contains a central domain pfam00013, hence the amino and carboxyl-terminal domains are stored separately.

Probab=99.93  E-value=2.7e-26  Score=171.82  Aligned_cols=62  Identities=55%  Similarity=1.004  Sum_probs=60.5

Q ss_pred             CCCCCCCCEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
Q ss_conf             98645785266503206215670273125799998999999999877422642215532588
Q gi|254780255|r    1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHK   62 (227)
Q Consensus         1 MGQKvnP~g~RLg~~k~w~S~Wfa~~k~Y~~~L~eD~~IR~fi~k~l~~agis~i~I~Rt~~   62 (227)
T Consensus         1 MGQKvnP~gfRLgi~k~w~S~Wfa~~~~Y~~~l~eD~~IR~~i~~~~~~a~is~i~IeR~~~   62 (62)
T pfam00417         1 MGQKVNPIGFRLGITRNWDSKWFANKKNYAKLLNEDLKIRNYINKNLKPAGISRIEIERKID   62 (62)
T ss_pred             CCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCC
T ss_conf             98876975032275579968864765566899999999999999861657677799986589