HHsearch alignment of GI: 254780255 and MMDB domain: 2vqe_C_1-109
>2vqe_C (C:1-109) 30S ribosomal protein S3; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} PDB: 1gix_F* 1hnw_C* 1hnx_C* 1hnz_C* 1hr0_C 1ibk_C* 1ibl_C* 1ibm_C 1j5e_C 1jgo_F* 1jgp_F* 1jgq_F* 1ml5_F* 1n32_C* 1n33_C* 1n34_C 1n36_C 1xmo_C* 1xmq_C* 1xnq_C* ...
Probab=100.00 E-value=1.2e-39 Score=248.66 Aligned_cols=109 Identities=43% Similarity=0.786 Sum_probs=108.4
Q ss_pred CCCCCCCCEEEEEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCCCCCCC
Q ss_conf 98645785266503206215670273125799998999999999877422642215532588518999973741001356
Q gi|254780255|r 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKK 80 (227)
Q Consensus 1 MGQKvnP~g~RLg~~k~w~S~Wfa~~k~Y~~~L~eD~~IR~fi~k~l~~agis~i~I~Rt~~~i~I~I~~~kP~~iiGkk 80 (227)
|||||||+|||||++++|+|.|||++++|+++|+||++||+||.+++..+|+++|+|+|+++.+.|+||+++|+++||++
T Consensus 1 MGQKvnP~g~Rlgi~~~~~S~Wfa~~k~y~~~l~eD~~IR~~l~k~~~~a~is~I~I~R~~~~~~I~I~~~rpg~iIG~~ 80 (109)
T 2vqe_C 1 MGNKIHPIGFRLGITRDWESRWYAGKKQYRHLLLEDQRIRGLLEKELYSAGLARVDIERAADNVAVTVHVAKPGVVIGRG 80 (109)
T ss_dssp -CCCCCTTTTTTTSSCCCSBCCCCCTTTHHHHHHHHHHHHHHHHTTTTTTCEEEECBCBSSSCBCCEEEESCGGGTSCSS
T ss_pred CCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECCCCEEECCC
T ss_conf 97988980621254689852484880466799999999999999752341335058872267459999946876232035
Q ss_pred CHHHHHHHHHHHCCCCCEEEEEEEEECCC
Q ss_conf 53489989876403587057879981375
Q gi|254780255|r 81 GTDIEKIRKKLSNMTNSEIHLSVNEVPKP 109 (227)
Q Consensus 81 g~~i~~l~~~L~~~~~~~v~i~v~ei~~p 109 (227)
|+++++|++.|+++++++++|+|.||++|
T Consensus 81 g~~i~~l~~~L~k~~~k~~~i~v~ev~~P 109 (109)
T 2vqe_C 81 GERIRVLREELAKLTGKNVALNVQEVQNP 109 (109)
T ss_dssp SSHHHHHHHHHHHHSTTCCCCEEEECSCT
T ss_pred CHHHHHHHHHHHHHHCCCEEEEEEEEECC
T ss_conf 42578899898887099749999997154