HHsearch alignment of GI: 254780255 and MMDB domain: 2vqe_C_110-239
>2vqe_C (C:110-239) 30S ribosomal protein S3; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} PDB: 1gix_F* 1hnw_C* 1hnx_C* 1hnz_C* 1hr0_C 1ibk_C* 1ibl_C* 1ibm_C 1j5e_C 1jgo_F* 1jgp_F* 1jgq_F* 1ml5_F* 1n32_C* 1n33_C* 1n34_C 1n36_C 1xmo_C* 1xmq_C* 1xnq_C* ...
Probab=100.00 E-value=1.7e-39 Score=247.68 Aligned_cols=109 Identities=50% Similarity=0.770 Sum_probs=104.2
Q ss_pred CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCEEEECEEEEEEE
Q ss_conf 53377879999999875963689999999985323885599997036786422215787525532452000030568999
Q gi|254780255|r 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189 (227)
Q Consensus 110 ~~~A~~iA~~Ia~~Lekr~~fRr~~k~~i~~~~k~g~kGikI~isGRl~G~e~Ar~e~~~~G~vpl~t~~a~idy~~~~a 189 (227)
++||+++|++||.+||++++||++++++++++|++|++||+|+|||||+|++|||++++.+|.+||||++++|||++.+|
T Consensus 1 el~a~~iA~~Ia~~Le~~~~frr~~~~~i~~~m~~g~~GikI~isGRl~g~~~Ar~~~~~~G~ipl~~~~~~Idya~~~a 80 (130)
T 2vqe_C 1 NLSAPLVAQRVAEQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSGRIGGAEQARTEWAAQGRVPLHTLRANIDYGFALA 80 (130)
T ss_dssp TSCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHSSCSEEEEEECSCTTTCSSCCCBCCEEECCCTTCGGGCEEEEEECC
T ss_pred CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHCCEEEEEECCCCCCCCCCCEEEEEEEEE
T ss_conf 42137999999999972420689999999875325830899997257750211157887637555666543178899999
Q ss_pred EECCCEEEEEEEEEECCCCCCCCCCCCCC
Q ss_conf 95382667999973288537721134332
Q gi|254780255|r 190 ETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218 (227)
Q Consensus 190 ~T~~G~~GvKVwi~~~~~~~~~~~~~~~~ 218 (227)
+|+||+|||||||++++..+++.......
T Consensus 81 ~tk~GviGIKVwI~~~~~~~~~~~~~~~~ 109 (130)
T 2vqe_C 81 RTTYGVLGVKAYIFLGEVIGGQKPKARPE 109 (130)
T ss_dssp BCSSCBCCEEEEEECCCC-----------
T ss_pred ECCCEEEEEEEEEECCCCCCCCCCCCCCC
T ss_conf 86867089999998787178877555765