HHsearch alignment of GI: 254780255 and MMDB domain: 3gku_A_61-140
>3gku_A (A:61-140) Probable RNA-binding protein; APC21302, structural genomics, PSI-2, protein structure initiative; 2.95A {Clostridium symbiosum atcc 14940}
Probab=95.43 E-value=0.01 Score=35.27 Aligned_cols=59 Identities=25% Similarity=0.435 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHCCCC-CEEEEE--CCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCC
Q ss_conf 9999999877422642-215532--5885189999737410013565348998987640358
Q gi|254780255|r 38 KIREYLQCHLKQAGVA-KILIER--THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN 96 (227)
Q Consensus 38 ~IR~fi~k~l~~agis-~i~I~R--t~~~i~I~I~~~kP~~iiGkkg~~i~~l~~~L~~~~~ 96 (227)
.+++|++..+...|+. .+.|.- ..+.+.+.|....++++|||+|+.++.|+..++...+
T Consensus 5 ~~~~~L~~il~~mg~~~~v~i~~~~~~~~i~i~i~g~~~g~LIGk~G~tL~ALQ~L~~~~~~ 66 (80)
T 3gku_A 5 KAIEFLEQVFDAXNXAVDISVEYNETEKEXNVNLKGDDXGILIGKRGQTLDSLQYLVSLVVN 66 (80)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEEEETTTTEEEEEEECHHHHHCSTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEEEEECCCEEEEEEECCCHHHHHCCCCCHHHHHHHHHHHHHHH
T ss_conf 66899999999769964899999548538999943750543226970678999999999998