BLAST/PSIBLAST alignment of GI: 254780255 and GI: 325293330 at iteration 1
>gi|325293330|ref|YP_004279194.1| 30S ribosomal protein S3 [Agrobacterium sp. H13-3] Length = 243
>gi|325061183|gb|ADY64874.1| 30S ribosomal protein S3 [Agrobacterium sp. H13-3] Length = 243
 Score =  319 bits (817), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 156/227 (68%), Positives = 186/227 (81%), Gaps = 3/227 (1%)

Query: 1   MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
           MGQKINPI FRLG+N TW+SRW+A  +EYG LLHEDLKIR YL   LKQAG+AK++IER 
Sbjct: 1   MGQKINPIGFRLGINRTWDSRWYADTAEYGKLLHEDLKIRAYLIKELKQAGIAKVVIERP 60

Query: 61  HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
           HK CR+ ++SARPGLIIGKKG DIEK+RKKLS MTNSE HL++ EV KPEI+ATL+AQSI
Sbjct: 61  HKKCRVTIHSARPGLIIGKKGADIEKLRKKLSEMTNSETHLNIVEVRKPEIDATLVAQSI 120

Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
           AQQLERRV FRRAMKR+VQSAMR GA+G+K+   GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRSVQSAMRLGAEGIKITCGGRLGGAEIARTEWYREGRVPLHTLRA 180

Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
            IDYGTA AETA+G CGIKV++  + E+ + D    A+E R +E D+
Sbjct: 181 DIDYGTAEAETAFGICGIKVWI-FKGEILEHDPM--ASERRGLEGDA 224