PSIBLAST alignment of GI: 254780255 and protein with PDB id: 3bbn
gi|188036204|pdb|3BBN|C Chain C, Homology Model For The Spinach Chloroplast 30s Subunit Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome. Length = 218
Score = 227 bits (580), Expect = 7e-58, Method: Composition-based stats.
Identities = 75/218 (34%), Positives = 129/218 (59%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + S WF++ Y L ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHYSLWFSQPKNYAEGLQEDQKIRDCIKNYVQKNTKTSSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK---IRKKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I++ P L+I + +E +K N N ++++++ + KP
Sbjct: 61 ARIEIQKRIDLIQVIIHMGFPKLLIENRPQGVEDLKINVQKELNCVNRKLNIAITRIAKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ ++A+ IA QL+ RV FR+AMK+A++ + G+++ +GR++G E++R E
Sbjct: 121 YGDPNILAEFIAGQLKSRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARIEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY T YG GIK+++ + +E
Sbjct: 181 EGRVPLQTIRAKIDYCAYTVRTIYGVLGIKIWIFMGEE 218