PSIBLAST alignment of GI: 254780255 and protein with PDB id: 3jyv
>gi|281500809|pdb|3JYV|C Chain C, Structure Of The 40s Rrna And Proteins And PE TRNA FOR EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome At 8.9a Resolution Length = 188
Score = 98.5 bits (244), Expect = 7e-19, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 75/186 (40%), Gaps = 13/186 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ L + G + + + T +I+ + R ++G+ G
Sbjct: 8 ADGVFYAEL-------NEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLGENGRR 60
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K I L V ++A A+S+ +L + RRA V+
Sbjct: 61 INELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVRY 120
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A ++ + +G + Q + ID T G GI
Sbjct: 121 VMESGAKGCEVVVSGKLRAA-RAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQGVLGI 179
Query: 199 KVYVSL 204
KV +
Sbjct: 180 KVKIMR 185