BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780255|ref|YP_003064668.1| 30S ribosomal protein S3
[Candidatus Liberibacter asiaticus str. psy62]
(227 letters)
Database: nr
13,984,884 sequences; 4,792,584,752 total letters
Searching..................................................done
>gi|86357311|ref|YP_469203.1| 30S ribosomal protein S3 [Rhizobium etli CFN 42]
gi|190891361|ref|YP_001977903.1| 30S ribosomal protein S3 [Rhizobium etli CIAT 652]
gi|123765804|sp|Q2K9L0|RS3_RHIEC RecName: Full=30S ribosomal protein S3
gi|226697748|sp|B3PWS7|RS3_RHIE6 RecName: Full=30S ribosomal protein S3
gi|86281413|gb|ABC90476.1| 30S ribosomal protein S3 [Rhizobium etli CFN 42]
gi|190696640|gb|ACE90725.1| 30S ribosomal protein S3 [Rhizobium etli CIAT 652]
gi|327191391|gb|EGE58417.1| ribosomal protein S3 [Rhizobium etli CNPAF512]
Length = 244
Score = 292 bits (748), Expect = 2e-77, Method: Composition-based stats.
Identities = 151/227 (66%), Positives = 189/227 (83%), Gaps = 3/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI FRLG+N TW+SRWFA +EYG LLHEDLK+R+++ LKQAG++K++IER
Sbjct: 1 MGQKINPIGFRLGINRTWDSRWFADNAEYGQLLHEDLKMRKFVMSELKQAGISKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ ++SARPGLIIG+KG DI+K+RKKLS+MTNSE HL++ EV KPE++ATL+AQSI
Sbjct: 61 HKKCRVTIHSARPGLIIGRKGADIDKLRKKLSDMTNSETHLNIVEVRKPEVDATLVAQSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+K+ +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIKITCAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYGTA AETA+G CGIKV++ + E+ + D A+E R +E D+
Sbjct: 181 DIDYGTAEAETAFGICGIKVWIF-KGEILEHDPM--ASERRALEGDA 224
>gi|209548941|ref|YP_002280858.1| 30S ribosomal protein S3 [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|226697749|sp|B5ZYU1|RS3_RHILW RecName: Full=30S ribosomal protein S3
gi|209534697|gb|ACI54632.1| ribosomal protein S3 [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 243
Score = 292 bits (747), Expect = 3e-77, Method: Composition-based stats.
Identities = 151/227 (66%), Positives = 189/227 (83%), Gaps = 3/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI FRLG+N TW+SRWFA +EYG LLHEDLK+R+++ LKQAG++K++IER
Sbjct: 1 MGQKINPIGFRLGINRTWDSRWFADNAEYGQLLHEDLKMRKFVMSELKQAGISKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ ++SARPGLIIG+KG DI+K+RKKLS+MTNSE HL++ EV KPE++ATL+AQSI
Sbjct: 61 HKKCRVTIHSARPGLIIGRKGADIDKLRKKLSDMTNSETHLNIVEVRKPEVDATLVAQSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+K+ +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIKITCAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYGTA AETA+G CGIKV++ + E+ + D A+E R +E D+
Sbjct: 181 DIDYGTAEAETAFGICGIKVWIF-KGEILEHDPM--ASERRAMEGDA 224
>gi|227821762|ref|YP_002825732.1| 30S ribosomal protein S3 [Sinorhizobium fredii NGR234]
gi|254764541|sp|C3MAY6|RS3_RHISN RecName: Full=30S ribosomal protein S3
gi|227340761|gb|ACP24979.1| 30S ribosomal protein S3 [Sinorhizobium fredii NGR234]
Length = 237
Score = 292 bits (747), Expect = 3e-77, Method: Composition-based stats.
Identities = 155/227 (68%), Positives = 185/227 (81%), Gaps = 3/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI FRLG+N TW+SRWFA +EYG LLHEDLKIR YL LK AG+AK++IER
Sbjct: 1 MGQKINPIGFRLGINRTWDSRWFADNAEYGQLLHEDLKIRAYLMEELKAAGIAKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ ++SARPGLIIGKKG DIEK+RKKLS MTNSE HL++ EV KPE++ATL+AQSI
Sbjct: 61 HKKCRVTIHSARPGLIIGKKGADIEKLRKKLSEMTNSETHLNIVEVRKPEVDATLVAQSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+K+ +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIKITCAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYGTA AETA+G CG+KV++ + E+ + D A+E R E D+
Sbjct: 181 DIDYGTAEAETAFGICGVKVWIF-KGEILEHDPM--ASERRATESDN 224
>gi|150396213|ref|YP_001326680.1| 30S ribosomal protein S3 [Sinorhizobium medicae WSM419]
gi|189045338|sp|A6U865|RS3_SINMW RecName: Full=30S ribosomal protein S3
gi|150027728|gb|ABR59845.1| ribosomal protein S3 [Sinorhizobium medicae WSM419]
Length = 237
Score = 291 bits (746), Expect = 3e-77, Method: Composition-based stats.
Identities = 155/227 (68%), Positives = 185/227 (81%), Gaps = 3/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI FRLG+N TW+SRWFA +EYG LLHEDLKIR YL LK AG+AK++IER
Sbjct: 1 MGQKINPIGFRLGINRTWDSRWFADNAEYGQLLHEDLKIRAYLMEELKAAGIAKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ ++SARPGLIIGKKG DIEK+RKKLS MTNSE HL++ EV KPE++ATL+AQSI
Sbjct: 61 HKKCRVTIHSARPGLIIGKKGADIEKLRKKLSEMTNSETHLNIVEVRKPEVDATLVAQSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+K+ +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIKITCAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYGTA AETA+G CG+KV++ + E+ + D A+E R E D+
Sbjct: 181 DIDYGTAEAETAFGICGVKVWIF-KGEILEHDPM--ASERRATESDN 224
>gi|15965115|ref|NP_385468.1| 30S ribosomal protein S3 [Sinorhizobium meliloti 1021]
gi|307314365|ref|ZP_07593971.1| ribosomal protein S3 [Sinorhizobium meliloti BL225C]
gi|307322077|ref|ZP_07601453.1| ribosomal protein S3 [Sinorhizobium meliloti AK83]
gi|27734523|sp|Q92QG4|RS3_RHIME RecName: Full=30S ribosomal protein S3
gi|15074295|emb|CAC45941.1| Probable 30S ribosomal protein S3 [Sinorhizobium meliloti 1021]
gi|306892259|gb|EFN23069.1| ribosomal protein S3 [Sinorhizobium meliloti AK83]
gi|306899063|gb|EFN29705.1| ribosomal protein S3 [Sinorhizobium meliloti BL225C]
Length = 237
Score = 291 bits (745), Expect = 5e-77, Method: Composition-based stats.
Identities = 155/227 (68%), Positives = 185/227 (81%), Gaps = 3/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI FRLG+N TW+SRWFA +EYG LLHEDLKIR YL LK AG+AK++IER
Sbjct: 1 MGQKINPIGFRLGINRTWDSRWFADNAEYGQLLHEDLKIRAYLMEELKSAGIAKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ ++SARPGLIIGKKG DIEK+RKKLS MTNSE HL++ EV KPE++ATL+AQSI
Sbjct: 61 HKKCRVTIHSARPGLIIGKKGADIEKLRKKLSEMTNSETHLNIVEVRKPEVDATLVAQSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+K+ +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIKITCAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYGTA AETA+G CG+KV++ + E+ + D A+E R E D+
Sbjct: 181 DIDYGTAEAETAFGICGVKVWIF-KGEILEHDPM--ASERRATESDN 224
>gi|116251546|ref|YP_767384.1| 30S ribosomal protein S3 [Rhizobium leguminosarum bv. viciae 3841]
gi|241204171|ref|YP_002975267.1| 30S ribosomal protein S3 [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|123261672|sp|Q1MID5|RS3_RHIL3 RecName: Full=30S ribosomal protein S3
gi|115256194|emb|CAK07275.1| putative 30S ribosomal protein S3 [Rhizobium leguminosarum bv.
viciae 3841]
gi|240858061|gb|ACS55728.1| ribosomal protein S3 [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 243
Score = 291 bits (745), Expect = 5e-77, Method: Composition-based stats.
Identities = 151/227 (66%), Positives = 188/227 (82%), Gaps = 3/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI FRLG+N TW+SRWFA +EYG LLHEDLK+R+++ LKQAG++K++IER
Sbjct: 1 MGQKINPIGFRLGINRTWDSRWFADNAEYGQLLHEDLKMRKFVMSELKQAGISKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ ++SARPGLIIG+KG DI+K+RKKLS MTNSE HL++ EV KPE++ATL+AQSI
Sbjct: 61 HKKCRVTIHSARPGLIIGRKGADIDKLRKKLSEMTNSETHLNIVEVRKPEVDATLVAQSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+K+ +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIKITCAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYGTA AETA+G CGIKV++ + E+ + D A+E R +E D+
Sbjct: 181 DIDYGTAEAETAFGICGIKVWIF-KGEILEHDPM--ASERRAMEGDA 224
>gi|222085681|ref|YP_002544211.1| ribosomal protein S3 [Agrobacterium radiobacter K84]
gi|254764507|sp|B9JDT4|RS3_AGRRK RecName: Full=30S ribosomal protein S3
gi|221723129|gb|ACM26285.1| ribosomal protein S3 [Agrobacterium radiobacter K84]
Length = 241
Score = 291 bits (745), Expect = 5e-77, Method: Composition-based stats.
Identities = 152/227 (66%), Positives = 187/227 (82%), Gaps = 3/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI FRLG+N TW+SRWFA +EYG LLHEDLK+R+++ LKQAG++K++IER
Sbjct: 1 MGQKINPIGFRLGINRTWDSRWFADNAEYGQLLHEDLKMRKFVMDELKQAGISKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ ++SARPGLIIGKKG DI+K+RKKLS+MTNSE HL++ EV KPEI+A L+AQSI
Sbjct: 61 HKKCRVTIHSARPGLIIGKKGADIDKLRKKLSDMTNSETHLNIVEVRKPEIDAVLVAQSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+K+ GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIKITCGGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYGTA AETA+G CGIKV++ + E+ + D A+E R +E D+
Sbjct: 181 DIDYGTAEAETAFGICGIKVWIF-KGEILEHDPM--ASERRALEGDA 224
>gi|15889236|ref|NP_354917.1| 30S ribosomal protein S3 [Agrobacterium tumefaciens str. C58]
gi|27734508|sp|Q8UE24|RS3_AGRT5 RecName: Full=30S ribosomal protein S3
gi|15157063|gb|AAK87702.1| 30S ribosomal protein S3 [Agrobacterium tumefaciens str. C58]
Length = 243
Score = 289 bits (740), Expect = 2e-76, Method: Composition-based stats.
Identities = 157/227 (69%), Positives = 186/227 (81%), Gaps = 3/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI FRLG+N TW+SRW+A +EYG LLHEDLKIR YL LKQAG+AK++IER
Sbjct: 1 MGQKINPIGFRLGINRTWDSRWYADTAEYGKLLHEDLKIRAYLIKELKQAGIAKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ ++SARPGLIIGKKG DIEK+RKKLS MTNSE HL++ EV KPEI+ATL+AQSI
Sbjct: 61 HKKCRVTIHSARPGLIIGKKGADIEKLRKKLSEMTNSETHLNIVEVRKPEIDATLVAQSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+K+ GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIKITCGGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYGTA AETA+G CGIKV++ + E+ + D A+E R +E D+
Sbjct: 181 DIDYGTAEAETAFGICGIKVWIF-KGEILEHDPM--ASERRGLEGDA 224
>gi|119383517|ref|YP_914573.1| 30S ribosomal protein S3 [Paracoccus denitrificans PD1222]
gi|152060888|sp|A1B033|RS3_PARDP RecName: Full=30S ribosomal protein S3
gi|119373284|gb|ABL68877.1| SSU ribosomal protein S3P [Paracoccus denitrificans PD1222]
Length = 240
Score = 289 bits (739), Expect = 2e-76, Method: Composition-based stats.
Identities = 134/225 (59%), Positives = 172/225 (76%), Gaps = 4/225 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RL VN TW+SRW+A +YG LL EDLKIR++++ KQAGV++++IER
Sbjct: 1 MGQKVNPIGMRLQVNRTWDSRWYADDKDYGNLLLEDLKIRDFIKKEAKQAGVSRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +Y+ARPG+IIGKKG DIE +RKKL+N T SE+HL++ EV KPE++A L+A+SI
Sbjct: 61 HKKCRVTIYAARPGVIIGKKGADIETLRKKLANFTGSELHLNIVEVRKPELDAQLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQ+AMR GA G++V SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVSFRRAMKRAVQNAMRMGALGIRVNVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY + A T YG G+KV++ + E+ + D P A R +
Sbjct: 181 DIDYALSEASTPYGIIGVKVWIF-KGEIMEHD---PQARDRRATE 221
>gi|163760805|ref|ZP_02167884.1| 30S ribosomal protein S3 [Hoeflea phototrophica DFL-43]
gi|162281849|gb|EDQ32141.1| 30S ribosomal protein S3 [Hoeflea phototrophica DFL-43]
Length = 234
Score = 288 bits (737), Expect = 4e-76, Method: Composition-based stats.
Identities = 149/227 (65%), Positives = 184/227 (81%), Gaps = 3/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI FRLG+N TW+SRWFA +EYG LLHEDLKIR+YL LKQAG++K++IER
Sbjct: 1 MGQKINPIGFRLGINRTWDSRWFADNAEYGKLLHEDLKIRKYLLAELKQAGISKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +++ARPGLIIGKKG DIEK+R+KL MT SE HL++ EV KPE++ATL+AQSI
Sbjct: 61 HKKCRVTIHAARPGLIIGKKGADIEKLRRKLGEMTQSETHLNIVEVRKPEVDATLVAQSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERR+ FRRAMKR+VQSAMR GA+G+K+ GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRIAFRRAMKRSVQSAMRLGAEGIKITCGGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYGTA A+TAYG CG+KV++ + E+ + D A+E R E D+
Sbjct: 181 DIDYGTAEAKTAYGICGVKVWIF-KGEILEHDPM--ASERRATEGDA 224
>gi|254470501|ref|ZP_05083905.1| ribosomal protein S3 [Pseudovibrio sp. JE062]
gi|211960812|gb|EEA96008.1| ribosomal protein S3 [Pseudovibrio sp. JE062]
Length = 238
Score = 288 bits (737), Expect = 4e-76, Method: Composition-based stats.
Identities = 143/226 (63%), Positives = 175/226 (77%), Gaps = 4/226 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RLG+N TW+SRWFA +EYG LLHED +IREYL LKQA V+K++IER
Sbjct: 1 MGQKINPIGLRLGINRTWDSRWFASKNEYGDLLHEDFRIREYLLKELKQAAVSKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ ++S RPG++IGKKG DIE++RKKLS MTNSE+HL++ EV KPE +A L+A SI
Sbjct: 61 HKKCRVTIHSGRPGVVIGKKGADIERLRKKLSAMTNSEVHLNIVEVRKPETDAALVAASI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA G+++ GRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAQGIRINCGGRLGGAEIARIEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDYGTA A TAYG+CG+KV++ + E+ + D P A R +
Sbjct: 181 DIDYGTATAHTAYGACGVKVWIF-KGEILEHD---PMASERRATEG 222
>gi|325293330|ref|YP_004279194.1| 30S ribosomal protein S3 [Agrobacterium sp. H13-3]
gi|325061183|gb|ADY64874.1| 30S ribosomal protein S3 [Agrobacterium sp. H13-3]
Length = 243
Score = 288 bits (736), Expect = 5e-76, Method: Composition-based stats.
Identities = 156/227 (68%), Positives = 186/227 (81%), Gaps = 3/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI FRLG+N TW+SRW+A +EYG LLHEDLKIR YL LKQAG+AK++IER
Sbjct: 1 MGQKINPIGFRLGINRTWDSRWYADTAEYGKLLHEDLKIRAYLIKELKQAGIAKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ ++SARPGLIIGKKG DIEK+RKKLS MTNSE HL++ EV KPEI+ATL+AQSI
Sbjct: 61 HKKCRVTIHSARPGLIIGKKGADIEKLRKKLSEMTNSETHLNIVEVRKPEIDATLVAQSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKR+VQSAMR GA+G+K+ GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRSVQSAMRLGAEGIKITCGGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYGTA AETA+G CGIKV++ + E+ + D A+E R +E D+
Sbjct: 181 DIDYGTAEAETAFGICGIKVWIF-KGEILEHDPM--ASERRGLEGDA 224
>gi|319783326|ref|YP_004142802.1| ribosomal protein S3 [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317169214|gb|ADV12752.1| ribosomal protein S3 [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 241
Score = 287 bits (734), Expect = 9e-76, Method: Composition-based stats.
Identities = 146/227 (64%), Positives = 181/227 (79%), Gaps = 3/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N TW+SRWFA EYG LLHED+KIR+YL+ LKQA ++K++IER
Sbjct: 1 MGQKVNPIGLRLGINRTWDSRWFANTGEYGKLLHEDIKIRKYLEKELKQAAISKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +++ARPGLIIGKKG DIEK+RKKL MT SE HL++ EV KPEI+ATL+AQSI
Sbjct: 61 HKKCRVTIHAARPGLIIGKKGADIEKLRKKLMEMTKSETHLNIVEVRKPEIDATLVAQSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERR+ FRRAMKRAVQSAMR GA+G+++ +GRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRIAFRRAMKRAVQSAMRLGAEGIRINCAGRLGGAEIARMEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
+DYGTA A TAYG CG+KV+V + E+ + D A+E R E D+
Sbjct: 181 DVDYGTAEAHTAYGICGVKVWVF-KGEILEHDPM--ASERRASESDA 224
>gi|298291444|ref|YP_003693383.1| ribosomal protein S3 [Starkeya novella DSM 506]
gi|296927955|gb|ADH88764.1| ribosomal protein S3 [Starkeya novella DSM 506]
Length = 235
Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats.
Identities = 138/226 (61%), Positives = 178/226 (78%), Gaps = 3/226 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ RLG+N TW+SRWFA EYG LLHED+KIRE L LKQA V+KI+IER
Sbjct: 1 MGQKVNPVGLRLGINRTWDSRWFAGKGEYGQLLHEDIKIREMLLKLLKQAAVSKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ ++SARPG++IGKKG DI+K+RKK++ MTNSE+ +++ E+ KPEI+A L+A+SI
Sbjct: 61 HKKCRVTIHSARPGVVIGKKGADIDKLRKKVAEMTNSEVFINIVEIRKPEIDARLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARLEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
+DYGTA A T YG+CG+KV++ + E+ + D A + R E +
Sbjct: 181 DVDYGTATAFTTYGTCGVKVWIF-KGEILEHDPM--AQDKRQAEGE 223
>gi|154245629|ref|YP_001416587.1| ribosomal protein S3 [Xanthobacter autotrophicus Py2]
gi|226697776|sp|A7IFY7|RS3_XANP2 RecName: Full=30S ribosomal protein S3
gi|154159714|gb|ABS66930.1| ribosomal protein S3 [Xanthobacter autotrophicus Py2]
Length = 252
Score = 286 bits (732), Expect = 1e-75, Method: Composition-based stats.
Identities = 138/227 (60%), Positives = 179/227 (78%), Gaps = 3/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ RLG+N TW+SRWFA EYG LLHED+KIRE L LKQA V+K++IER
Sbjct: 1 MGQKVNPVGLRLGINRTWDSRWFANKGEYGKLLHEDIKIREMLFKQLKQAAVSKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +YS RPG++IGKKG DI+K+RKK+S MT+SE+ +++ E+ KPEI+A L+A+SI
Sbjct: 61 HKKCRVTIYSGRPGVVIGKKGADIDKLRKKVSEMTSSEVFINIVEIRKPEIDARLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARLEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
+DYGTA A T YG+CG+KV+V + E+ + D A + R E+++
Sbjct: 181 DVDYGTATAFTTYGTCGVKVWVF-KGEILEHDPM--AQDKRQAEQEA 224
>gi|304321446|ref|YP_003855089.1| 30S ribosomal protein S3 [Parvularcula bermudensis HTCC2503]
gi|303300348|gb|ADM09947.1| 30S ribosomal protein S3 [Parvularcula bermudensis HTCC2503]
Length = 241
Score = 286 bits (732), Expect = 2e-75, Method: Composition-based stats.
Identities = 135/227 (59%), Positives = 176/227 (77%), Gaps = 3/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI RLG+N TW+SRWFA YG LLHEDL+IR +LQ LK AGV++I+IER
Sbjct: 1 MGQKVSPIGLRLGINRTWDSRWFASKGNYGDLLHEDLRIRNFLQKRLKNAGVSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +Y+ARPG++IGKKG DIEK+R++L M++SE L++ E+ KPE++ATL+A++I
Sbjct: 61 HKKCRVTIYTARPGVVIGKKGADIEKLRQELQKMSSSETVLNIVEIRKPEVDATLVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERR FRRAMKRA+Q+AMR GA G++V SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRASFRRAMKRAMQTAMRMGALGIRVNCSGRLGGAEIARMEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYG A A T YG+ GIKV++ + E+ D D A+E R+VE +
Sbjct: 181 DIDYGIATARTTYGAIGIKVWIF-KGEILDHDPM--ASERRLVESQT 224
>gi|144900890|emb|CAM77754.1| 30S ribosomal protein S3 [Magnetospirillum gryphiswaldense MSR-1]
Length = 228
Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 134/227 (59%), Positives = 173/227 (76%), Gaps = 5/227 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N TW+SRWFA G +Y +LHEDLK+R+YL+ L QAGV++++IER
Sbjct: 1 MGQKVNPIGLRLGINRTWDSRWFADG-DYAKMLHEDLKLRDYLRKKLAQAGVSRVIIERP 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K RI +++ARPG++IGKKG DIE +RK LS MT E+HL++ E+ KPE++A L+A+SI
Sbjct: 60 AKKARITIHTARPGVVIGKKGADIEVLRKTLSKMTGGEVHLNIVEIRKPELDAQLVAESI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 120 AQQLERRVSFRRAMKRAVQSAMRLGAQGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYG A+T YG+CGIKV+V + E+ D P A+ + +S
Sbjct: 180 DIDYGIGTAKTTYGTCGIKVWVF-KGEILAHD---PMAQDKRAAGES 222
>gi|254780255|ref|YP_003064668.1| 30S ribosomal protein S3 [Candidatus Liberibacter asiaticus str.
psy62]
gi|254039932|gb|ACT56728.1| 30S ribosomal protein S3 [Candidatus Liberibacter asiaticus str.
psy62]
Length = 227
Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 227/227 (100%), Positives = 227/227 (100%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT
Sbjct: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI
Sbjct: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA
Sbjct: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS
Sbjct: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
>gi|39936307|ref|NP_948583.1| 30S ribosomal protein S3 [Rhodopseudomonas palustris CGA009]
gi|316933533|ref|YP_004108515.1| 30S ribosomal protein S3 [Rhodopseudomonas palustris DX-1]
gi|61215590|sp|Q6N4U0|RS3_RHOPA RecName: Full=30S ribosomal protein S3; AltName: Full=RRP-S3
gi|39650162|emb|CAE28685.1| 30S ribosomal protein S3 [Rhodopseudomonas palustris CGA009]
gi|315601247|gb|ADU43782.1| ribosomal protein S3 [Rhodopseudomonas palustris DX-1]
Length = 235
Score = 286 bits (731), Expect = 2e-75, Method: Composition-based stats.
Identities = 135/226 (59%), Positives = 181/226 (80%), Gaps = 4/226 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RLG+N TW+SRWFA +EYG LLHED+KIRE L LKQA VA+I+IER
Sbjct: 1 MGQKINPIGLRLGINRTWDSRWFAGKNEYGKLLHEDVKIREILHKELKQAAVARIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ ++SARPG++IGKKG DI+K+RKK++++T+S++ +++ E+ KPE++ATL+A+SI
Sbjct: 61 HKKCRVTIHSARPGVVIGKKGADIDKLRKKVADITSSDVVINIVEIRKPELDATLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDYG A A T +G+CG+KV++ + E+ + D P A+ + + +
Sbjct: 181 DIDYGVATAFTTFGTCGVKVWIF-KGEILEHD---PMAQDKRMAEG 222
>gi|192292031|ref|YP_001992636.1| 30S ribosomal protein S3 [Rhodopseudomonas palustris TIE-1]
gi|226697751|sp|B3QBX4|RS3_RHOPT RecName: Full=30S ribosomal protein S3
gi|192285780|gb|ACF02161.1| ribosomal protein S3 [Rhodopseudomonas palustris TIE-1]
Length = 235
Score = 285 bits (730), Expect = 3e-75, Method: Composition-based stats.
Identities = 135/226 (59%), Positives = 181/226 (80%), Gaps = 4/226 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RLG+N TW+SRWFA +EYG LLHED+KIRE L LKQA VA+I+IER
Sbjct: 1 MGQKINPIGLRLGINRTWDSRWFAGKNEYGKLLHEDVKIREILHKELKQAAVARIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ ++SARPG++IGKKG DI+K+RKK++++T+S++ +++ E+ KPE++ATL+A+SI
Sbjct: 61 HKKCRVTIHSARPGVVIGKKGADIDKLRKKVADITSSDVVINIVEIRKPELDATLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDYG A A T +G+CG+KV++ + E+ + D P A+ + + +
Sbjct: 181 DIDYGVATAFTTFGTCGVKVWIF-KGEILEHD---PMAQDKRMAES 222
>gi|23502104|ref|NP_698231.1| 30S ribosomal protein S3 [Brucella suis 1330]
gi|62290138|ref|YP_221931.1| 30S ribosomal protein S3 [Brucella abortus bv. 1 str. 9-941]
gi|82700061|ref|YP_414635.1| 30S ribosomal protein S3 [Brucella melitensis biovar Abortus 2308]
gi|148559744|ref|YP_001259147.1| 30S ribosomal protein S3 [Brucella ovis ATCC 25840]
gi|189024376|ref|YP_001935144.1| Ribosomal protein S3 [Brucella abortus S19]
gi|225627697|ref|ZP_03785734.1| ribosomal protein S3 [Brucella ceti str. Cudo]
gi|237815646|ref|ZP_04594643.1| ribosomal protein S3 [Brucella abortus str. 2308 A]
gi|254689447|ref|ZP_05152701.1| 30S ribosomal protein S3 [Brucella abortus bv. 6 str. 870]
gi|254693932|ref|ZP_05155760.1| 30S ribosomal protein S3 [Brucella abortus bv. 3 str. Tulya]
gi|254697582|ref|ZP_05159410.1| 30S ribosomal protein S3 [Brucella abortus bv. 2 str. 86/8/59]
gi|254701968|ref|ZP_05163796.1| 30S ribosomal protein S3 [Brucella suis bv. 5 str. 513]
gi|254710298|ref|ZP_05172109.1| 30S ribosomal protein S3 [Brucella pinnipedialis B2/94]
gi|254714295|ref|ZP_05176106.1| 30S ribosomal protein S3 [Brucella ceti M644/93/1]
gi|254717732|ref|ZP_05179543.1| 30S ribosomal protein S3 [Brucella ceti M13/05/1]
gi|254719285|ref|ZP_05181096.1| 30S ribosomal protein S3 [Brucella sp. 83/13]
gi|254730476|ref|ZP_05189054.1| 30S ribosomal protein S3 [Brucella abortus bv. 4 str. 292]
gi|256031792|ref|ZP_05445406.1| 30S ribosomal protein S3 [Brucella pinnipedialis M292/94/1]
gi|256061307|ref|ZP_05451457.1| 30S ribosomal protein S3 [Brucella neotomae 5K33]
gi|256159962|ref|ZP_05457680.1| 30S ribosomal protein S3 [Brucella ceti M490/95/1]
gi|256255193|ref|ZP_05460729.1| 30S ribosomal protein S3 [Brucella ceti B1/94]
gi|256257693|ref|ZP_05463229.1| 30S ribosomal protein S3 [Brucella abortus bv. 9 str. C68]
gi|256369651|ref|YP_003107161.1| 30S ribosomal protein S3 [Brucella microti CCM 4915]
gi|260168926|ref|ZP_05755737.1| 30S ribosomal protein S3 [Brucella sp. F5/99]
gi|260546686|ref|ZP_05822425.1| ribosomal protein S3 [Brucella abortus NCTC 8038]
gi|260754970|ref|ZP_05867318.1| 30S ribosomal protein S3 [Brucella abortus bv. 6 str. 870]
gi|260758186|ref|ZP_05870534.1| 30S ribosomal protein S3 [Brucella abortus bv. 4 str. 292]
gi|260762012|ref|ZP_05874355.1| 30S ribosomal protein S3 [Brucella abortus bv. 2 str. 86/8/59]
gi|260883979|ref|ZP_05895593.1| 30S ribosomal protein S3 [Brucella abortus bv. 9 str. C68]
gi|261214224|ref|ZP_05928505.1| 30S ribosomal protein S3 [Brucella abortus bv. 3 str. Tulya]
gi|261219575|ref|ZP_05933856.1| 30S ribosomal protein S3 [Brucella ceti M13/05/1]
gi|261222389|ref|ZP_05936670.1| 30S ribosomal protein S3 [Brucella ceti B1/94]
gi|261317861|ref|ZP_05957058.1| 30S ribosomal protein S3 [Brucella pinnipedialis B2/94]
gi|261322070|ref|ZP_05961267.1| 30S ribosomal protein S3 [Brucella ceti M644/93/1]
gi|261325314|ref|ZP_05964511.1| 30S ribosomal protein S3 [Brucella neotomae 5K33]
gi|261752536|ref|ZP_05996245.1| 30S ribosomal protein S3 [Brucella suis bv. 5 str. 513]
gi|261758419|ref|ZP_06002128.1| ribosomal protein S3 [Brucella sp. F5/99]
gi|265984285|ref|ZP_06097020.1| 30S ribosomal protein S3 [Brucella sp. 83/13]
gi|265988890|ref|ZP_06101447.1| 30S ribosomal protein S3 [Brucella pinnipedialis M292/94/1]
gi|265998354|ref|ZP_06110911.1| 30S ribosomal protein S3 [Brucella ceti M490/95/1]
gi|297248533|ref|ZP_06932251.1| 30S ribosomal protein S3 [Brucella abortus bv. 5 str. B3196]
gi|306838037|ref|ZP_07470895.1| ribosomal protein S3 [Brucella sp. NF 2653]
gi|306840307|ref|ZP_07473079.1| ribosomal protein S3 [Brucella sp. BO2]
gi|306844131|ref|ZP_07476725.1| ribosomal protein S3 [Brucella sp. BO1]
gi|27734491|sp|P59180|RS3_BRUSU RecName: Full=30S ribosomal protein S3
gi|75505262|sp|Q57CR4|RS3_BRUAB RecName: Full=30S ribosomal protein S3
gi|91207642|sp|Q2YRA1|RS3_BRUA2 RecName: Full=30S ribosomal protein S3
gi|189044955|sp|A5VR00|RS3_BRUO2 RecName: Full=30S ribosomal protein S3
gi|226697671|sp|B2S673|RS3_BRUA1 RecName: Full=30S ribosomal protein S3
gi|23348064|gb|AAN30146.1| ribosomal protein S3 [Brucella suis 1330]
gi|62196270|gb|AAX74570.1| RpsC, ribosomal protein S3 [Brucella abortus bv. 1 str. 9-941]
gi|82616162|emb|CAJ11205.1| Ribosomal protein S3:Type 2 KH domain:KH domain:Bacterial ribosomal
protein S3 [Brucella melitensis biovar Abortus 2308]
gi|148371001|gb|ABQ60980.1| ribosomal protein S3 [Brucella ovis ATCC 25840]
gi|189019948|gb|ACD72670.1| Ribosomal protein S3 [Brucella abortus S19]
gi|225617702|gb|EEH14747.1| ribosomal protein S3 [Brucella ceti str. Cudo]
gi|237788944|gb|EEP63155.1| ribosomal protein S3 [Brucella abortus str. 2308 A]
gi|255999813|gb|ACU48212.1| 30S ribosomal protein S3 [Brucella microti CCM 4915]
gi|260095736|gb|EEW79613.1| ribosomal protein S3 [Brucella abortus NCTC 8038]
gi|260668504|gb|EEX55444.1| 30S ribosomal protein S3 [Brucella abortus bv. 4 str. 292]
gi|260672444|gb|EEX59265.1| 30S ribosomal protein S3 [Brucella abortus bv. 2 str. 86/8/59]
gi|260675078|gb|EEX61899.1| 30S ribosomal protein S3 [Brucella abortus bv. 6 str. 870]
gi|260873507|gb|EEX80576.1| 30S ribosomal protein S3 [Brucella abortus bv. 9 str. C68]
gi|260915831|gb|EEX82692.1| 30S ribosomal protein S3 [Brucella abortus bv. 3 str. Tulya]
gi|260920973|gb|EEX87626.1| 30S ribosomal protein S3 [Brucella ceti B1/94]
gi|260924664|gb|EEX91232.1| 30S ribosomal protein S3 [Brucella ceti M13/05/1]
gi|261294760|gb|EEX98256.1| 30S ribosomal protein S3 [Brucella ceti M644/93/1]
gi|261297084|gb|EEY00581.1| 30S ribosomal protein S3 [Brucella pinnipedialis B2/94]
gi|261301294|gb|EEY04791.1| 30S ribosomal protein S3 [Brucella neotomae 5K33]
gi|261738403|gb|EEY26399.1| ribosomal protein S3 [Brucella sp. F5/99]
gi|261742289|gb|EEY30215.1| 30S ribosomal protein S3 [Brucella suis bv. 5 str. 513]
gi|262552822|gb|EEZ08812.1| 30S ribosomal protein S3 [Brucella ceti M490/95/1]
gi|264661087|gb|EEZ31348.1| 30S ribosomal protein S3 [Brucella pinnipedialis M292/94/1]
gi|264662877|gb|EEZ33138.1| 30S ribosomal protein S3 [Brucella sp. 83/13]
gi|297175702|gb|EFH35049.1| 30S ribosomal protein S3 [Brucella abortus bv. 5 str. B3196]
gi|306275574|gb|EFM57306.1| ribosomal protein S3 [Brucella sp. BO1]
gi|306289706|gb|EFM60895.1| ribosomal protein S3 [Brucella sp. BO2]
gi|306406961|gb|EFM63182.1| ribosomal protein S3 [Brucella sp. NF 2653]
Length = 236
Score = 285 bits (729), Expect = 3e-75, Method: Composition-based stats.
Identities = 150/227 (66%), Positives = 183/227 (80%), Gaps = 3/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RLG+N TW+SRW+A EYG LLHED+KIRE+L LKQA ++KI+IER
Sbjct: 1 MGQKINPIGLRLGINRTWDSRWYANTGEYGKLLHEDVKIREFLTEELKQAAISKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ ++SARPG+IIGKKG DIEK+RKKLS MTN++ L++ EV KPE++ATLIAQSI
Sbjct: 61 HKKCRVTIHSARPGIIIGKKGADIEKLRKKLSEMTNADTSLNIVEVRKPEVDATLIAQSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYGTA A+TAYG CG+KV+V + E+ + D A+E R VE D+
Sbjct: 181 DIDYGTAEAKTAYGICGVKVWVF-KGEILEHDPM--ASERRAVEGDN 224
>gi|158424172|ref|YP_001525464.1| ribosomal protein S3 [Azorhizobium caulinodans ORS 571]
gi|189044949|sp|A8IAR2|RS3_AZOC5 RecName: Full=30S ribosomal protein S3
gi|158331061|dbj|BAF88546.1| ribosomal protein S3 [Azorhizobium caulinodans ORS 571]
Length = 248
Score = 285 bits (729), Expect = 3e-75, Method: Composition-based stats.
Identities = 134/226 (59%), Positives = 178/226 (78%), Gaps = 3/226 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ RLG+N TW+SRWFA +YG LLHED+KIR+ L LKQA V+K++IER
Sbjct: 1 MGQKVNPVGLRLGINRTWDSRWFANKGDYGTLLHEDIKIRQMLLKQLKQAAVSKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +YSARPG++IGKKG DI+K+RKK+++MT SE+ +++ E+ KPEI+A L+A+SI
Sbjct: 61 HKKCRVTIYSARPGVVIGKKGADIDKLRKKVADMTKSEVFINIVEIRKPEIDARLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARLEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
+DYGTA A T YG+CG+KV++ + E+ + D A + R+ +
Sbjct: 181 DVDYGTATAFTTYGTCGVKVWIF-KGEILEHDPM--AVDKRMTAES 223
>gi|17987046|ref|NP_539680.1| 30S ribosomal protein S3 [Brucella melitensis bv. 1 str. 16M]
gi|225852724|ref|YP_002732957.1| 30S ribosomal protein S3 [Brucella melitensis ATCC 23457]
gi|256044877|ref|ZP_05447781.1| 30S ribosomal protein S3 [Brucella melitensis bv. 1 str. Rev.1]
gi|256113781|ref|ZP_05454585.1| 30S ribosomal protein S3 [Brucella melitensis bv. 3 str. Ether]
gi|256263786|ref|ZP_05466318.1| 30S ribosomal protein S3 [Brucella melitensis bv. 2 str. 63/9]
gi|260565521|ref|ZP_05836005.1| 30S ribosomal protein S3 [Brucella melitensis bv. 1 str. 16M]
gi|265991304|ref|ZP_06103861.1| 30S ribosomal protein S3 [Brucella melitensis bv. 1 str. Rev.1]
gi|265995141|ref|ZP_06107698.1| 30S ribosomal protein S3 [Brucella melitensis bv. 3 str. Ether]
gi|27734517|sp|Q8YHN4|RS3_BRUME RecName: Full=30S ribosomal protein S3
gi|254764516|sp|C0RJJ5|RS3_BRUMB RecName: Full=30S ribosomal protein S3
gi|17982702|gb|AAL51944.1| ssu ribosomal protein s3p [Brucella melitensis bv. 1 str. 16M]
gi|225641089|gb|ACO01003.1| ribosomal protein S3 [Brucella melitensis ATCC 23457]
gi|260151589|gb|EEW86683.1| 30S ribosomal protein S3 [Brucella melitensis bv. 1 str. 16M]
gi|262766254|gb|EEZ12043.1| 30S ribosomal protein S3 [Brucella melitensis bv. 3 str. Ether]
gi|263002088|gb|EEZ14663.1| 30S ribosomal protein S3 [Brucella melitensis bv. 1 str. Rev.1]
gi|263093914|gb|EEZ17848.1| 30S ribosomal protein S3 [Brucella melitensis bv. 2 str. 63/9]
gi|326409249|gb|ADZ66314.1| 30S ribosomal protein S3 [Brucella melitensis M28]
gi|326538957|gb|ADZ87172.1| ribosomal protein S3 [Brucella melitensis M5-90]
Length = 236
Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 151/227 (66%), Positives = 183/227 (80%), Gaps = 3/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RLGVN TW+SRW+A EYG LLHED+KIRE+L LKQA ++KI+IER
Sbjct: 1 MGQKINPIGLRLGVNRTWDSRWYANTGEYGKLLHEDVKIREFLTEELKQAAISKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ ++SARPG+IIGKKG DIEK+RKKLS MTN++ L++ EV KPE++ATLIAQSI
Sbjct: 61 HKKCRVTIHSARPGIIIGKKGADIEKLRKKLSEMTNADTSLNIVEVRKPEVDATLIAQSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYGTA A+TAYG CG+KV+V + E+ + D A+E R VE D+
Sbjct: 181 DIDYGTAEAKTAYGICGVKVWVF-KGEILEHDPM--ASERRAVEGDN 224
>gi|110634024|ref|YP_674232.1| 30S ribosomal protein S3 [Mesorhizobium sp. BNC1]
gi|123162296|sp|Q11HQ8|RS3_MESSB RecName: Full=30S ribosomal protein S3
gi|110285008|gb|ABG63067.1| SSU ribosomal protein S3P [Chelativorans sp. BNC1]
Length = 235
Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 147/224 (65%), Positives = 182/224 (81%), Gaps = 3/224 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N TW+SRWFA +EYG LLHEDLKIR Y++ LKQA ++K++IER
Sbjct: 1 MGQKVNPIGLRLGINRTWDSRWFANTNEYGQLLHEDLKIRTYIENELKQAAISKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ ++SARPGLIIGKKG DIEK+R+K++ MTN+E HL++ EV KPEI+A LIAQSI
Sbjct: 61 HKKCRVTIHSARPGLIIGKKGADIEKLRRKITQMTNAETHLNIVEVRKPEIDARLIAQSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+++ +GRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCTGRLGGAEIARIEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
IDYGTA A+TAYG CG+KV+V + E+ + D A+E R VE
Sbjct: 181 DIDYGTAEAKTAYGVCGVKVWVF-KGEILEHDPM--ASERRAVE 221
>gi|153009292|ref|YP_001370507.1| 30S ribosomal protein S3 [Ochrobactrum anthropi ATCC 49188]
gi|239832116|ref|ZP_04680445.1| ribosomal protein S3 [Ochrobactrum intermedium LMG 3301]
gi|189045024|sp|A6X0C4|RS3_OCHA4 RecName: Full=30S ribosomal protein S3
gi|151561180|gb|ABS14678.1| ribosomal protein S3 [Ochrobactrum anthropi ATCC 49188]
gi|239824383|gb|EEQ95951.1| ribosomal protein S3 [Ochrobactrum intermedium LMG 3301]
Length = 236
Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 151/227 (66%), Positives = 183/227 (80%), Gaps = 3/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RLG+N TW+SRW+A EYG LLHED+KIRE+L LKQA ++KI+IER
Sbjct: 1 MGQKINPIGLRLGINRTWDSRWYANTGEYGKLLHEDVKIREFLTEELKQAAISKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ ++SARPG+IIGKKG DIEK+RKKLS MTN++ L++ EV KPEI+ATLIAQSI
Sbjct: 61 HKKCRVTIHSARPGIIIGKKGADIEKLRKKLSEMTNADTSLNIVEVRKPEIDATLIAQSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYGTA A+TAYG CG+KV+V + E+ + D A+E R VE D+
Sbjct: 181 DIDYGTAEAKTAYGICGVKVWVF-KGEILEHDPM--ASERRAVEGDN 224
>gi|146340063|ref|YP_001205111.1| 30S ribosomal protein S3 [Bradyrhizobium sp. ORS278]
gi|152060849|sp|A4YSJ8|RS3_BRASO RecName: Full=30S ribosomal protein S3
gi|146192869|emb|CAL76874.1| 30S ribosomal subunit protein S3 [Bradyrhizobium sp. ORS278]
Length = 236
Score = 285 bits (729), Expect = 4e-75, Method: Composition-based stats.
Identities = 134/226 (59%), Positives = 181/226 (80%), Gaps = 4/226 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RLG+N TW+SRWFA +EYG LLHED+KIRE L LKQA VA+I+IER
Sbjct: 1 MGQKINPIGLRLGINRTWDSRWFAGKAEYGKLLHEDVKIREILHKELKQAAVARIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ ++SARPG++IGKKG DI+K+RK+++++T+S++ +++ E+ KPE++ATL+A+SI
Sbjct: 61 HKKCRVTIHSARPGVVIGKKGADIDKLRKRVADITSSDVVINIVEIRKPELDATLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDYG A A T +G+CG+KV++ + E+ + D P A+ + + +
Sbjct: 181 DIDYGVATAFTTFGTCGVKVWIF-KGEILEHD---PMAQDKRMNEG 222
>gi|258542033|ref|YP_003187466.1| 30S ribosomal protein S3 [Acetobacter pasteurianus IFO 3283-01]
gi|329114212|ref|ZP_08242974.1| 30S ribosomal protein S3 [Acetobacter pomorum DM001]
gi|256633111|dbj|BAH99086.1| SSU ribosomal protein S3P [Acetobacter pasteurianus IFO 3283-01]
gi|256636168|dbj|BAI02137.1| SSU ribosomal protein S3P [Acetobacter pasteurianus IFO 3283-03]
gi|256639223|dbj|BAI05185.1| SSU ribosomal protein S3P [Acetobacter pasteurianus IFO 3283-07]
gi|256642277|dbj|BAI08232.1| SSU ribosomal protein S3P [Acetobacter pasteurianus IFO 3283-22]
gi|256645332|dbj|BAI11280.1| SSU ribosomal protein S3P [Acetobacter pasteurianus IFO 3283-26]
gi|256648387|dbj|BAI14328.1| SSU ribosomal protein S3P [Acetobacter pasteurianus IFO 3283-32]
gi|256651440|dbj|BAI17374.1| SSU ribosomal protein S3P [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256654431|dbj|BAI20358.1| SSU ribosomal protein S3P [Acetobacter pasteurianus IFO 3283-12]
gi|326696288|gb|EGE47967.1| 30S ribosomal protein S3 [Acetobacter pomorum DM001]
Length = 225
Score = 284 bits (728), Expect = 4e-75, Method: Composition-based stats.
Identities = 127/227 (55%), Positives = 172/227 (75%), Gaps = 5/227 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+NPI RLG+N TW+SRW+A +Y LLHEDLK+R +L+ L AGV++++IER
Sbjct: 1 MGHKVNPIGLRLGINRTWDSRWYADS-DYSKLLHEDLKLRAFLRRKLVGAGVSRVVIERP 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ +Y+ARPG++IGKKG DI+ +RK+L+ M +E+ L++ E+ KPEI+ATL+A++I
Sbjct: 60 AKKPRVTIYAARPGVVIGKKGQDIDALRKELTRMAGTEVALNIVEIRKPEIDATLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 120 AQQLERRVAFRRAMKRAVQSAMRLGAQGIRINCSGRLGGAEIARIEWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYGTA A+T YG+CG+KV++ + E+ D P A+ R + +
Sbjct: 180 DIDYGTATAKTTYGTCGVKVWIF-KGEILAHD---PMAQDRRAAEQA 222
>gi|84685423|ref|ZP_01013321.1| 30S ribosomal protein S3 [Maritimibacter alkaliphilus HTCC2654]
gi|84666580|gb|EAQ13052.1| 30S ribosomal protein S3 [Rhodobacterales bacterium HTCC2654]
Length = 235
Score = 284 bits (727), Expect = 6e-75, Method: Composition-based stats.
Identities = 133/225 (59%), Positives = 175/225 (77%), Gaps = 4/225 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RL VN TW+SRW+A +EYG LL EDLKIRE+++ KQAGV++++IER
Sbjct: 1 MGQKVNPIGMRLQVNRTWDSRWYADTNEYGDLLLEDLKIREFIKEECKQAGVSRVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +++ARPG+IIGKKG DIE +RKKL+ MT+SE+HL++ EV KPE++A L+A+SI
Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIEVLRKKLAKMTDSELHLNIVEVRKPELDAQLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRA Q++MR GA G++V +GRL GAE++RTE EGRVPL TLRA
Sbjct: 121 AQQLERRVSFRRAMKRAAQNSMRMGALGIRVNCAGRLGGAEIARTEWLREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY A A+T YG GIKV++ + E+ + D P+A R ++
Sbjct: 181 DIDYALAEAKTPYGIIGIKVWIF-KGEIMEHD---PSARDRKQQE 221
>gi|294852564|ref|ZP_06793237.1| 30S ribosomal protein S3 [Brucella sp. NVSL 07-0026]
gi|294821153|gb|EFG38152.1| 30S ribosomal protein S3 [Brucella sp. NVSL 07-0026]
Length = 236
Score = 284 bits (727), Expect = 6e-75, Method: Composition-based stats.
Identities = 151/227 (66%), Positives = 184/227 (81%), Gaps = 3/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RLG+N TW+SRW+A EYG LLHED+KIRE+L LKQA ++KI+IER
Sbjct: 1 MGQKINPIGLRLGINRTWDSRWYANTGEYGKLLHEDVKIREFLTEELKQAAISKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ ++SARPG+IIGKKG DIEK+RKKLS MTN++ L++ EV KPE++ATLIAQSI
Sbjct: 61 HKKCRVTIHSARPGIIIGKKGADIEKLRKKLSEMTNADTSLNIVEVRKPEVDATLIAQSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYGTA A+TAYG CG+KV+V + E+ + DS A+E R VE D+
Sbjct: 181 DIDYGTAEAKTAYGICGVKVWVF-KGEILEHDSM--ASERRAVEGDN 224
>gi|148256386|ref|YP_001240971.1| 30S ribosomal protein S3 [Bradyrhizobium sp. BTAi1]
gi|189044953|sp|A5ELM1|RS3_BRASB RecName: Full=30S ribosomal protein S3
gi|146408559|gb|ABQ37065.1| SSU ribosomal protein S3P [Bradyrhizobium sp. BTAi1]
Length = 236
Score = 284 bits (727), Expect = 6e-75, Method: Composition-based stats.
Identities = 134/226 (59%), Positives = 181/226 (80%), Gaps = 4/226 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RLG+N TW+SRWFA +EYG LLHED+KIRE L LKQA VA+I+IER
Sbjct: 1 MGQKINPIGLRLGINRTWDSRWFAGKAEYGKLLHEDVKIREILHKELKQAAVARIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ ++SARPG++IGKKG DI+K+RK+++++T+S++ +++ E+ KPE++ATL+A+SI
Sbjct: 61 HKKCRVTIHSARPGVVIGKKGADIDKLRKRVADITSSDVVINIVEIRKPELDATLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDYG A A T +G+CG+KV++ + E+ + D P A+ + + +
Sbjct: 181 DIDYGVATAFTTFGTCGVKVWIF-KGEILEHD---PMAQDKRMNEG 222
>gi|254706592|ref|ZP_05168420.1| 30S ribosomal protein S3 [Brucella pinnipedialis M163/99/10]
gi|261314051|ref|ZP_05953248.1| 30S ribosomal protein S3 [Brucella pinnipedialis M163/99/10]
gi|261303077|gb|EEY06574.1| 30S ribosomal protein S3 [Brucella pinnipedialis M163/99/10]
Length = 236
Score = 284 bits (727), Expect = 6e-75, Method: Composition-based stats.
Identities = 149/227 (65%), Positives = 182/227 (80%), Gaps = 3/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RLG+N TW+SRW+A EYG LLHED+KIRE+L LKQA ++KI+IER
Sbjct: 1 MGQKINPIGLRLGINRTWDSRWYANTGEYGKLLHEDVKIREFLTEELKQAAISKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ ++SARPG+IIGKKG DIEK+RKKLS MTN++ L++ EV KPE++ATLIAQSI
Sbjct: 61 HKKCRVTIHSARPGIIIGKKGADIEKLRKKLSEMTNADTSLNIVEVRKPEVDATLIAQSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL G E++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGTEIARMEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYGTA A+TAYG CG+KV+V + E+ + D A+E R VE D+
Sbjct: 181 DIDYGTAEAKTAYGICGVKVWVF-KGEILEHDPM--ASERRAVEGDN 224
>gi|56695401|ref|YP_165749.1| 30S ribosomal protein S3 [Ruegeria pomeroyi DSS-3]
gi|62287190|sp|Q5LW56|RS3_SILPO RecName: Full=30S ribosomal protein S3
gi|56677138|gb|AAV93804.1| ribosomal protein S3 [Ruegeria pomeroyi DSS-3]
Length = 235
Score = 284 bits (726), Expect = 7e-75, Method: Composition-based stats.
Identities = 134/225 (59%), Positives = 173/225 (76%), Gaps = 4/225 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+NPI RL VN TW+SRW+A +YG LL EDL IRE+++ KQAGVA+++IER
Sbjct: 1 MGHKVNPIGMRLQVNRTWDSRWYADTKDYGNLLLEDLAIREFIKEECKQAGVARVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +++ARPG+IIGKKG DIE +RKKL+NMT+SE+HL++ EV KPE++A L+A+SI
Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIETLRKKLANMTDSELHLNIVEVRKPEMDAQLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQ++MR GA G++V +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVSFRRAMKRAVQNSMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY A A T YG GIKV++ + E+ + D P A R ++
Sbjct: 181 DIDYALAEASTPYGIIGIKVWIF-KGEILEHD---PQARDRKAQE 221
>gi|23014082|ref|ZP_00053919.1| COG0092: Ribosomal protein S3 [Magnetospirillum magnetotacticum
MS-1]
Length = 227
Score = 284 bits (726), Expect = 7e-75, Method: Composition-based stats.
Identities = 130/227 (57%), Positives = 171/227 (75%), Gaps = 5/227 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI R+G+N TW+SRWFA Y LLH+DLK+R+YL+ L QAGV++++IER
Sbjct: 1 MGQKVNPIGLRVGINRTWDSRWFAD-ENYAKLLHQDLKLRKYLRDKLAQAGVSRVVIERP 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K RI +++ARPG++IGKKG DIE +RK+LS MT E+HL++ E+ KPE++A L+A+SI
Sbjct: 60 AKKARITIHTARPGVVIGKKGADIEVLRKELSKMTGGEVHLNIVEIRKPELDAQLVAESI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 120 AQQLERRVAFRRAMKRAVQSAMRLGAQGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
+DYG A T YGSCG+KV+V + E+ D P A+ + ++
Sbjct: 180 DVDYGVGTAHTTYGSCGVKVWVF-KGEILAHD---PMAQDKRAAGET 222
>gi|86749421|ref|YP_485917.1| 30S ribosomal protein S3 [Rhodopseudomonas palustris HaA2]
gi|123408226|sp|Q2IXQ4|RS3_RHOP2 RecName: Full=30S ribosomal protein S3
gi|86572449|gb|ABD07006.1| SSU ribosomal protein S3P [Rhodopseudomonas palustris HaA2]
Length = 232
Score = 284 bits (726), Expect = 8e-75, Method: Composition-based stats.
Identities = 137/227 (60%), Positives = 181/227 (79%), Gaps = 3/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RLG+N TW+SRWFA +EYG LLHED+KIRE L LKQA VA+I+IER
Sbjct: 1 MGQKINPIGLRLGINRTWDSRWFAGKNEYGKLLHEDVKIREILHKELKQAAVARIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ ++SARPG++IGKKG DI+K+RKK++++T S++ +++ E+ KPE++ATL+A+SI
Sbjct: 61 HKKCRVTIHSARPGVVIGKKGADIDKLRKKVADITASDVVINIVEIRKPELDATLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYG A A T +G+CG+KV++ + E+ + D A + R+ E D+
Sbjct: 181 DIDYGVATAFTTFGTCGVKVWIF-KGEILEHDPM--AQDKRMAEGDN 224
>gi|163843493|ref|YP_001627897.1| 30S ribosomal protein S3 [Brucella suis ATCC 23445]
gi|189044956|sp|B0CH26|RS3_BRUSI RecName: Full=30S ribosomal protein S3
gi|163674216|gb|ABY38327.1| ribosomal protein S3 [Brucella suis ATCC 23445]
Length = 236
Score = 284 bits (726), Expect = 8e-75, Method: Composition-based stats.
Identities = 149/227 (65%), Positives = 183/227 (80%), Gaps = 3/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RLG+N TW+SRW+A EYG LLHED+KIRE+L LKQA ++KI+IER
Sbjct: 1 MGQKINPIGLRLGINRTWDSRWYANTGEYGKLLHEDVKIREFLTEELKQAAISKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ ++SARPG+IIGKKG DIEK+RKKLS MTN++ L++ EV KPE++ATLIAQ+I
Sbjct: 61 HKKCRVTIHSARPGIIIGKKGADIEKLRKKLSEMTNADTSLNIVEVRKPEVDATLIAQTI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYGTA A+TAYG CG+KV+V + E+ + D A+E R VE D+
Sbjct: 181 DIDYGTAEAKTAYGICGVKVWVF-KGEILEHDPM--ASERRAVEGDN 224
>gi|114704490|ref|ZP_01437398.1| 30S ribosomal protein S3 [Fulvimarina pelagi HTCC2506]
gi|114539275|gb|EAU42395.1| 30S ribosomal protein S3 [Fulvimarina pelagi HTCC2506]
Length = 235
Score = 284 bits (726), Expect = 8e-75, Method: Composition-based stats.
Identities = 148/223 (66%), Positives = 180/223 (80%), Gaps = 3/223 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG+N TW+SRWFA G EYG+LLHEDLKIR +L LKQA V+KI+IER
Sbjct: 1 MGQKINPTGFRLGINRTWDSRWFADGREYGSLLHEDLKIRNFLLDELKQAAVSKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CRI ++SARPG++IGKKG DIEK+RKKLS MT++E H+++ EV KPE +A L+AQSI
Sbjct: 61 HKKCRISIHSARPGIVIGKKGADIEKLRKKLSTMTDAETHINIVEVRKPETDAALVAQSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+++ GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCGGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223
+DYGTA AETAYG CG+KV++ + E+ + D A+E R V
Sbjct: 181 DVDYGTAEAETAYGICGVKVWIF-KGEILEHDPM--ASERRQV 220
>gi|161619183|ref|YP_001593070.1| 30S ribosomal protein S3 [Brucella canis ATCC 23365]
gi|254704512|ref|ZP_05166340.1| 30S ribosomal protein S3 [Brucella suis bv. 3 str. 686]
gi|260566244|ref|ZP_05836714.1| ribosomal protein S3 [Brucella suis bv. 4 str. 40]
gi|261755195|ref|ZP_05998904.1| 30S ribosomal protein S3 [Brucella suis bv. 3 str. 686]
gi|189044954|sp|A9M5P4|RS3_BRUC2 RecName: Full=30S ribosomal protein S3
gi|161335994|gb|ABX62299.1| ribosomal protein S3 [Brucella canis ATCC 23365]
gi|260155762|gb|EEW90842.1| ribosomal protein S3 [Brucella suis bv. 4 str. 40]
gi|261744948|gb|EEY32874.1| 30S ribosomal protein S3 [Brucella suis bv. 3 str. 686]
Length = 236
Score = 283 bits (725), Expect = 9e-75, Method: Composition-based stats.
Identities = 149/227 (65%), Positives = 182/227 (80%), Gaps = 3/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RLG+N TW+SRW+A EYG LLHED+KIRE+L LKQA ++KI+IER
Sbjct: 1 MGQKINPIGLRLGINRTWDSRWYANTGEYGKLLHEDVKIREFLTEELKQAAISKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ ++SARPG+IIGKKG DIEK+RKKLS MTN++ L++ EV KPE++ATLIAQ I
Sbjct: 61 HKKCRVTIHSARPGIIIGKKGADIEKLRKKLSEMTNADTSLNIVEVRKPEVDATLIAQLI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYGTA A+TAYG CG+KV+V + E+ + D A+E R VE D+
Sbjct: 181 DIDYGTAEAKTAYGICGVKVWVF-KGEILEHDPM--ASERRAVEGDN 224
>gi|85715125|ref|ZP_01046109.1| 30S ribosomal protein S3 [Nitrobacter sp. Nb-311A]
gi|85698040|gb|EAQ35913.1| 30S ribosomal protein S3 [Nitrobacter sp. Nb-311A]
Length = 231
Score = 283 bits (725), Expect = 9e-75, Method: Composition-based stats.
Identities = 135/226 (59%), Positives = 181/226 (80%), Gaps = 4/226 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RLG+N TW+SRW+A SEYG LLHED+KIRE L LKQA VA+I+IER
Sbjct: 1 MGQKINPIGLRLGINRTWDSRWYAGKSEYGRLLHEDVKIRELLHKELKQAAVARIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ ++SARPG++IGKKG DI+K+RK+++++T+S++ L++ E+ KPE++ATL+A+SI
Sbjct: 61 HKKCRVTIHSARPGVVIGKKGADIDKLRKRVADITSSDVVLNIVEIRKPELDATLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
+DYG A A T +G+CG+KV++ + E+ + D P A+ + + D
Sbjct: 181 DVDYGVATAFTTFGTCGVKVWIF-KGEILEHD---PMAQDKRLAGD 222
>gi|90424931|ref|YP_533301.1| 30S ribosomal protein S3 [Rhodopseudomonas palustris BisB18]
gi|123275055|sp|Q211F4|RS3_RHOPB RecName: Full=30S ribosomal protein S3
gi|90106945|gb|ABD88982.1| SSU ribosomal protein S3P [Rhodopseudomonas palustris BisB18]
Length = 232
Score = 283 bits (725), Expect = 1e-74, Method: Composition-based stats.
Identities = 136/227 (59%), Positives = 181/227 (79%), Gaps = 3/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RLG+N TW+SRW+A +EYG LLHED+KIRE L LKQA VA+I+IER
Sbjct: 1 MGQKINPIGLRLGINRTWDSRWYAGKNEYGKLLHEDVKIREILHKELKQAAVARIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ ++SARPG++IGKKG DI+K+RKK++++T S++ +++ E+ KPE++ATL+A+SI
Sbjct: 61 HKKCRVTIHSARPGVVIGKKGADIDKLRKKVADITASDVVINIVEIRKPELDATLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYG A A T +G+CG+KV++ + E+ + D A + R+ E D+
Sbjct: 181 DIDYGVATAFTTFGTCGVKVWIF-KGEILEHDPM--AQDKRMAEGDN 224
>gi|27380505|ref|NP_772034.1| 30S ribosomal protein S3 [Bradyrhizobium japonicum USDA 110]
gi|34098364|sp|Q89J90|RS3_BRAJA RecName: Full=30S ribosomal protein S3
gi|27353669|dbj|BAC50659.1| 30S ribosomal protein S3 [Bradyrhizobium japonicum USDA 110]
Length = 241
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 134/226 (59%), Positives = 180/226 (79%), Gaps = 4/226 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RLG+N TW+SRWFA EYG LLHED+KIRE L LKQA VA+I+IER
Sbjct: 1 MGQKINPIGLRLGINRTWDSRWFAGKQEYGKLLHEDVKIREILHKELKQAAVARIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ ++SARPG++IGKKG DI+K+RK+++++T+S++ +++ E+ KPE++ATL+A+SI
Sbjct: 61 HKKCRVTIHSARPGVVIGKKGADIDKLRKRVADITSSDVVINIVEIRKPELDATLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDYG A A T +G+CG+KV++ + E+ + D P A+ + + +
Sbjct: 181 DIDYGVATAFTTFGTCGVKVWIF-KGEILEHD---PMAQDKRMAEG 222
>gi|13470557|ref|NP_102126.1| 30S ribosomal protein S3 [Mesorhizobium loti MAFF303099]
gi|27734527|sp|Q98N51|RS3_RHILO RecName: Full=30S ribosomal protein S3
gi|14021299|dbj|BAB47912.1| 30S ribosomal protein S3 [Mesorhizobium loti MAFF303099]
Length = 241
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 146/224 (65%), Positives = 179/224 (79%), Gaps = 3/224 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N TW+SRWFA EYG LLHED+KIR+YL+ LKQA ++K++IER
Sbjct: 1 MGQKVNPIGLRLGINRTWDSRWFANTGEYGKLLHEDIKIRKYLEKELKQAAISKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +++ARPGLIIGKKG DIEK+RKKL MT SE HL++ EV KPEI+ATL+AQSI
Sbjct: 61 HKKCRVTIHAARPGLIIGKKGADIEKLRKKLMEMTKSETHLNIVEVRKPEIDATLVAQSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERR+ FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRIAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
+DYGTA A TAYG CG+KV+V + E+ + D A+E R E
Sbjct: 181 DVDYGTAEANTAYGICGVKVWVF-KGEILEHDPM--ASERRATE 221
>gi|328543364|ref|YP_004303473.1| 30S ribosomal protein S3 [Polymorphum gilvum SL003B-26A1]
gi|326413109|gb|ADZ70172.1| 30S ribosomal protein S3 [Polymorphum gilvum SL003B-26A1]
Length = 242
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 138/227 (60%), Positives = 173/227 (76%), Gaps = 4/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+NPI RLG+N TW+SRW+A EYG LLHED +IREYL LKQA V+KI+IER
Sbjct: 1 MGHKVNPIGMRLGINRTWDSRWYANKGEYGTLLHEDFRIREYLMNELKQAAVSKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ ++S RPG++IGKKG DIE++RKKL +T+SE+H+++ EV KPEI+A L+A SI
Sbjct: 61 HKKCRVTIHSGRPGVVIGKKGADIERLRKKLGQITSSEVHINIVEVRKPEIDANLVAASI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA G+++ GRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAQGIRINCGGRLGGAEIARVEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYG A A TAYG+CG+KV++ + E+ + D P A R + S
Sbjct: 181 DIDYGIATAHTAYGACGVKVWIF-KGEILEHD---PMASERRASEGS 223
>gi|254785085|ref|YP_003072513.1| 30S ribosomal protein S3 [Teredinibacter turnerae T7901]
gi|237684180|gb|ACR11444.1| ribosomal protein S3 [Teredinibacter turnerae T7901]
Length = 224
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 109/224 (48%), Positives = 155/224 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ S W+A +Y L+EDLK+R Y+Q L A V+++ IER
Sbjct: 1 MGQKVHPTGIRLGIVKKHTSTWYASKGDYADKLNEDLKVRAYIQKVLSHASVSRVDIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IGKKG D+EK+R ++S +H+++ E+ KP+++ L+AQS+
Sbjct: 61 ANTARVTIHTARPGIVIGKKGEDVEKLRAEISKQMGVPVHINIEEIRKPDLDGVLVAQSV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV+FRRAMKRAVQ+AMR GA+GVK+ SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRQGAEGVKIQVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
IDY TA A T YG G+KV++ + + + A + + +
Sbjct: 181 DIDYATAEASTTYGIIGVKVWIFKGEIIGGLEEAESAPKKKGAK 224
>gi|237653990|ref|YP_002890304.1| 30S ribosomal protein S3 [Thauera sp. MZ1T]
gi|237625237|gb|ACR01927.1| ribosomal protein S3 [Thauera sp. MZ1T]
Length = 256
Score = 283 bits (724), Expect = 1e-74, Method: Composition-based stats.
Identities = 122/230 (53%), Positives = 169/230 (73%), Gaps = 3/230 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V W SRWFA +Y +LHEDLK+R+YL+ L A V +++IER
Sbjct: 1 MGQKIHPTGFRLAVTRDWGSRWFANSKDYAGMLHEDLKVRDYLKKRLAHASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN R+ +YSARPG++IGKKG DIE +++ L + +H+++ EV KPE++A LIA SI
Sbjct: 61 AKNARVTLYSARPGVVIGKKGEDIEALKRDLQKIVGVPVHVNIEEVRKPELDAKLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNGAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI---PAAEHRVVEKDS 227
+IDYG + A+T YG GIKV+V + + ++ + P A++R + +
Sbjct: 181 NIDYGVSEAKTTYGVIGIKVWVFKGEMLGRNEQPVAAEPEADNRRGRRGA 230
>gi|90417759|ref|ZP_01225671.1| ribosomal protein S3 [Aurantimonas manganoxydans SI85-9A1]
gi|90337431|gb|EAS51082.1| ribosomal protein S3 [Aurantimonas manganoxydans SI85-9A1]
Length = 235
Score = 283 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 148/223 (66%), Positives = 179/223 (80%), Gaps = 3/223 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG+N TW+SRW+A EYG LLHEDLKIR YL LKQA V+KI+IER
Sbjct: 1 MGQKINPTGFRLGINRTWDSRWYANTGEYGHLLHEDLKIRAYLLNELKQAAVSKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CRI ++SARPG++IGKKG DIEK+RKKL+ MTN+E H+++ EV KPE +ATL+AQSI
Sbjct: 61 HKKCRITIHSARPGIVIGKKGADIEKLRKKLAAMTNAETHINIVEVRKPETDATLVAQSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+++ GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCGGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223
IDYGTA A+TAYG CG+KV++ + E+ + D A+E R V
Sbjct: 181 DIDYGTAEAKTAYGICGVKVWIF-KGEILEHDPM--ASERRQV 220
>gi|323136092|ref|ZP_08071175.1| ribosomal protein S3 [Methylocystis sp. ATCC 49242]
gi|322399183|gb|EFY01702.1| ribosomal protein S3 [Methylocystis sp. ATCC 49242]
Length = 251
Score = 283 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 135/227 (59%), Positives = 171/227 (75%), Gaps = 4/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLGVN TW+SRWFA EY LLHED+ IRE + LKQA V+KI+IER
Sbjct: 1 MGQKVNPIGLRLGVNRTWDSRWFASKGEYAKLLHEDMAIREAVMKLLKQAAVSKIIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ ++SARPG++IGKKG DI+KIRK + +T SE+ +++ EV KPE A L+A SI
Sbjct: 61 HKKCRVTIHSARPGVVIGKKGADIDKIRKLVGKLTGSEVVINIVEVRKPETEAALVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSA+R GA G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAIRLGAQGIRINCSGRLGGAEIARLEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
+DYGTA A TAYG+CGIKV++ + E+ + D P A+ + + +
Sbjct: 181 DVDYGTATAHTAYGACGIKVWIF-KGEILEHD---PMAQDKRAAEQA 223
>gi|91977646|ref|YP_570305.1| 30S ribosomal protein S3 [Rhodopseudomonas palustris BisB5]
gi|115525579|ref|YP_782490.1| 30S ribosomal protein S3 [Rhodopseudomonas palustris BisA53]
gi|122295414|sp|Q07KM4|RS3_RHOP5 RecName: Full=30S ribosomal protein S3
gi|123735289|sp|Q134T5|RS3_RHOPS RecName: Full=30S ribosomal protein S3
gi|91684102|gb|ABE40404.1| SSU ribosomal protein S3P [Rhodopseudomonas palustris BisB5]
gi|115519526|gb|ABJ07510.1| SSU ribosomal protein S3P [Rhodopseudomonas palustris BisA53]
Length = 232
Score = 283 bits (723), Expect = 2e-74, Method: Composition-based stats.
Identities = 136/227 (59%), Positives = 180/227 (79%), Gaps = 3/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RLG+N TW+SRWFA +EYG LLHED+KIR L LKQA VA+I+IER
Sbjct: 1 MGQKINPIGLRLGINRTWDSRWFAGKNEYGKLLHEDVKIRAILHKELKQAAVARIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ ++SARPG++IGKKG DI+K+RKK++++T S++ +++ E+ KPE++ATL+A+SI
Sbjct: 61 HKKCRVTIHSARPGVVIGKKGADIDKLRKKVADITASDVVINIVEIRKPELDATLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYG A A T +G+CG+KV++ + E+ + D A + R+ E D+
Sbjct: 181 DIDYGVATAFTTFGTCGVKVWIF-KGEILEHDPM--AQDKRMAEGDN 224
>gi|75675562|ref|YP_317983.1| 30S ribosomal protein S3 [Nitrobacter winogradskyi Nb-255]
gi|91207824|sp|Q3SSW0|RS3_NITWN RecName: Full=30S ribosomal protein S3
gi|74420432|gb|ABA04631.1| SSU ribosomal protein S3P [Nitrobacter winogradskyi Nb-255]
Length = 231
Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats.
Identities = 135/227 (59%), Positives = 180/227 (79%), Gaps = 3/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RLG+N TW+SRW+A +EYG LLHED+KIRE L LKQA VA+I+IER
Sbjct: 1 MGQKINPIGLRLGINRTWDSRWYAGKAEYGRLLHEDVKIRELLHKELKQAAVARIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ ++SARPG++IGKKG DI+K+RK+++++T+S++ L++ E+ KPE++ATL+A+SI
Sbjct: 61 HKKCRVTIHSARPGVVIGKKGADIDKLRKRVADITSSDVVLNIVEIRKPELDATLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
+DYG A A T +G+CG+KV++ + E+ + D A + R DS
Sbjct: 181 DVDYGVATAFTTFGTCGVKVWIF-KGEILEHDPM--AQDKRQAGDDS 224
>gi|329889135|ref|ZP_08267478.1| ribosomal protein S3 [Brevundimonas diminuta ATCC 11568]
gi|328844436|gb|EGF94000.1| ribosomal protein S3 [Brevundimonas diminuta ATCC 11568]
Length = 248
Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats.
Identities = 133/227 (58%), Positives = 173/227 (76%), Gaps = 4/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RLGVN TW+SRWFA G++Y LLH+DLK+R +L+ L AGV++I+IER
Sbjct: 1 MGQKINPIGLRLGVNRTWDSRWFAGGADYAKLLHQDLKLRTWLKERLSAAGVSRIIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +Y+ARPG++IGKKG DIEK+RK +S T E+HL++ EV KPE +A LIA++I
Sbjct: 61 HKKCRVTIYAARPGVVIGKKGADIEKLRKDISARTEGEVHLNIVEVRKPETDAQLIAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERR+ FRRAMKR++QSAMR GA GV++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRIAFRRAMKRSMQSAMRLGAKGVRINVSGRLGGAEIARMEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYG A+T YG G+KV+V + EV + D P A+ + +++
Sbjct: 181 DIDYGFYEAKTTYGIIGVKVWVF-KGEVLEHD---PMAQDKRWAQEA 223
>gi|260468548|ref|ZP_05813715.1| ribosomal protein S3 [Mesorhizobium opportunistum WSM2075]
gi|259028704|gb|EEW30013.1| ribosomal protein S3 [Mesorhizobium opportunistum WSM2075]
Length = 241
Score = 282 bits (722), Expect = 2e-74, Method: Composition-based stats.
Identities = 145/224 (64%), Positives = 179/224 (79%), Gaps = 3/224 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N TW+SRWFA EYG LLHED+KIR+YL+ LKQA ++K++IER
Sbjct: 1 MGQKVNPIGLRLGINRTWDSRWFANTGEYGKLLHEDIKIRKYLEKELKQAAISKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +++ARPGLIIGKKG DIEK+RKKL MT SE HL++ EV KPEI+ATL+AQSI
Sbjct: 61 HKKCRVTIHAARPGLIIGKKGADIEKLRKKLMEMTKSETHLNIVEVRKPEIDATLVAQSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERR+ FRRAMKRAVQSAMR GA+G+++ +GRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRIAFRRAMKRAVQSAMRLGAEGIRINCAGRLGGAEIARMEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
+DYGTA A TAYG CG+KV+V + E+ + D A+E R E
Sbjct: 181 DVDYGTAEANTAYGICGVKVWVF-KGEILEHDPM--ASERRATE 221
>gi|118591178|ref|ZP_01548577.1| 30S ribosomal protein S3 [Stappia aggregata IAM 12614]
gi|118436254|gb|EAV42896.1| 30S ribosomal protein S3 [Stappia aggregata IAM 12614]
Length = 242
Score = 282 bits (721), Expect = 3e-74, Method: Composition-based stats.
Identities = 135/227 (59%), Positives = 172/227 (75%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K NPI RLG+N TW+SRW+A +EYG LLHED +IRE L LKQA V+K++IER
Sbjct: 1 MGHKTNPIGMRLGINRTWDSRWYANKNEYGDLLHEDFRIRELLLKELKQAAVSKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ ++S RPG++IGKKG DIE++RKK++++TNSE+HL++ EV KPEI+ATL+AQSI
Sbjct: 61 HKKCRVSIHSGRPGVVIGKKGADIERLRKKIADITNSEVHLNIVEVRKPEIDATLVAQSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA G+++ GRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAQGIRINCGGRLGGAEIARIEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYG A A TAYG CG+KV++ + E+ + D + +
Sbjct: 181 DIDYGVASAHTAYGVCGVKVWIF-KGEILEHDPMASERRATAASEGN 226
>gi|182678343|ref|YP_001832489.1| ribosomal protein S3 [Beijerinckia indica subsp. indica ATCC 9039]
gi|226697664|sp|B2IK68|RS3_BEII9 RecName: Full=30S ribosomal protein S3
gi|182634226|gb|ACB95000.1| ribosomal protein S3 [Beijerinckia indica subsp. indica ATCC 9039]
Length = 241
Score = 282 bits (721), Expect = 3e-74, Method: Composition-based stats.
Identities = 138/225 (61%), Positives = 178/225 (79%), Gaps = 4/225 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N TW+SRWFA EY LLHED++IRE L +LKQA V+KI+IER
Sbjct: 1 MGQKVNPIGLRLGINRTWDSRWFANKGEYSKLLHEDMRIREVLMKNLKQAAVSKIIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ ++SARPG++IGKKG DI+KIRK +S +T+SE+ +++ EV KPEI+ATL+A SI
Sbjct: 61 HKKCRVTIHSARPGVVIGKKGADIDKIRKLVSKLTDSEVVINIVEVRKPEIDATLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSA+R GA+G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAIRLGAEGIRINCSGRLGGAEIARLEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
+DYG A A TAYG+CGIKV++ + E+ + D P A+ R + +
Sbjct: 181 DVDYGVATAHTAYGTCGIKVWIF-KGEILEHD---PMAQDRKMAE 221
>gi|83312223|ref|YP_422487.1| 30S ribosomal protein S3 [Magnetospirillum magneticum AMB-1]
gi|123726906|sp|Q2W2J7|RS3_MAGMM RecName: Full=30S ribosomal protein S3
gi|82947064|dbj|BAE51928.1| Ribosomal protein S3 [Magnetospirillum magneticum AMB-1]
Length = 227
Score = 282 bits (721), Expect = 3e-74, Method: Composition-based stats.
Identities = 131/227 (57%), Positives = 172/227 (75%), Gaps = 5/227 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI R+G+N TW+SRWFA Y LLH+DLK+R+YL+ L QAGV++++IER
Sbjct: 1 MGQKVNPIGLRVGINRTWDSRWFAD-ETYAKLLHQDLKLRKYLREKLAQAGVSRVVIERP 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K RI +++ARPG++IGKKG DIE +RK+LS MT SE+HL++ E+ KPE++A L+A+SI
Sbjct: 60 AKKARITIHTARPGVVIGKKGADIEVLRKELSKMTGSEVHLNIVEIRKPELDAQLVAESI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 120 AQQLERRVAFRRAMKRAVQSAMRLGAQGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
+DYG A T YGSCG+KV+V + E+ D P A+ + ++
Sbjct: 180 DVDYGVGTAHTTYGSCGVKVWVF-KGEILAHD---PMAQDKRAAGET 222
>gi|197104702|ref|YP_002130079.1| 30S ribosomal protein S3 [Phenylobacterium zucineum HLK1]
gi|226697742|sp|B4R8M3|RS3_PHEZH RecName: Full=30S ribosomal protein S3
gi|196478122|gb|ACG77650.1| 30S ribosomal protein S3 [Phenylobacterium zucineum HLK1]
Length = 253
Score = 282 bits (721), Expect = 3e-74, Method: Composition-based stats.
Identities = 136/227 (59%), Positives = 174/227 (76%), Gaps = 4/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP+ RLG+N TW+SRWFA G EYG LLHED+K+R L+ L QAGV++I+IER
Sbjct: 1 MGQKINPVGLRLGINRTWDSRWFADGPEYGRLLHEDIKVRRALKKRLYQAGVSRIIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CRI +Y+ARPG+IIGKKG DIEK+RK ++ MT+ E+HL++ E+ KPE +A LIA++I
Sbjct: 61 HKKCRITIYAARPGVIIGKKGADIEKLRKDVAAMTDGEVHLNIVEIRKPETDAQLIAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKR++QSAMR GA GV++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRSMQSAMRLGAKGVRINVSGRLGGAEIARMEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
+DYG A+T YG G+KV+V + EV + D P A + + +S
Sbjct: 181 DVDYGFTEAKTTYGVIGVKVWVF-KGEVLEHD---PMALDKRLAGES 223
>gi|254512172|ref|ZP_05124239.1| ribosomal protein S3 [Rhodobacteraceae bacterium KLH11]
gi|221535883|gb|EEE38871.1| ribosomal protein S3 [Rhodobacteraceae bacterium KLH11]
Length = 236
Score = 282 bits (721), Expect = 3e-74, Method: Composition-based stats.
Identities = 134/225 (59%), Positives = 172/225 (76%), Gaps = 4/225 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+NPI RL VN TW+SRW+A +YG LL EDLKIRE++ KQAGVA+++IER
Sbjct: 1 MGHKVNPIGMRLQVNRTWDSRWYADTKDYGDLLLEDLKIREFINKECKQAGVARVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +++ARPG+IIGKKG DIE +RKKL+ MT+SE+HL++ EV KPE++A L+A+SI
Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIEVLRKKLARMTDSELHLNIVEVRKPELDAQLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKR+VQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVSFRRAMKRSVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY A A T YG GIKV++ + E+ + D P A R ++
Sbjct: 181 DIDYAHAEAMTPYGIIGIKVWIF-KGEIMEHD---PQARDRKAQE 221
>gi|260432436|ref|ZP_05786407.1| ribosomal protein S3 [Silicibacter lacuscaerulensis ITI-1157]
gi|260416264|gb|EEX09523.1| ribosomal protein S3 [Silicibacter lacuscaerulensis ITI-1157]
Length = 236
Score = 282 bits (721), Expect = 3e-74, Method: Composition-based stats.
Identities = 134/225 (59%), Positives = 173/225 (76%), Gaps = 4/225 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+NPI RL VN TW+SRW+A +YG LL EDLKIRE+++ KQAGVA+++IER
Sbjct: 1 MGHKVNPIGMRLQVNRTWDSRWYADTKDYGDLLLEDLKIREFIKKECKQAGVARVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +++ARPG+IIGKKG DIE +RKKL+ MT+SE+HL++ EV KPE++A L+A+SI
Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIEVLRKKLAAMTDSELHLNIVEVRKPELDAQLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKR+VQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVSFRRAMKRSVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY A A T YG GIKV++ + E+ + D P A R ++
Sbjct: 181 DIDYAHAEAMTPYGIIGIKVWIF-KGEIMEHD---PQARDRKAQE 221
>gi|296447536|ref|ZP_06889458.1| ribosomal protein S3 [Methylosinus trichosporium OB3b]
gi|296254924|gb|EFH02029.1| ribosomal protein S3 [Methylosinus trichosporium OB3b]
Length = 247
Score = 281 bits (720), Expect = 4e-74, Method: Composition-based stats.
Identities = 135/227 (59%), Positives = 173/227 (76%), Gaps = 4/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLGVN TW+SRWFA EY LLHEDL IR + HLKQA V++I+IER
Sbjct: 1 MGQKVNPIGLRLGVNRTWDSRWFASKGEYAKLLHEDLAIRAAVAKHLKQAAVSRIIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ ++SARPG++IGKKG DI+KIRK + +T SE+ +++ EV KPE+ ATL+A SI
Sbjct: 61 HKKCRVTIHSARPGVVIGKKGADIDKIRKLVGRLTGSEVVINIVEVRKPEVEATLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSA+R GA G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAIRLGAQGIRINCSGRLGGAEIARLEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
+DYG A A TAYG+CGIKV++ + E+ + D P A+ + + + +
Sbjct: 181 DVDYGVATAHTAYGACGIKVWIF-KGEILEHD---PMAQDKRLAEAA 223
>gi|92117104|ref|YP_576833.1| 30S ribosomal protein S3 [Nitrobacter hamburgensis X14]
gi|122990230|sp|Q1QN24|RS3_NITHX RecName: Full=30S ribosomal protein S3
gi|91799998|gb|ABE62373.1| SSU ribosomal protein S3P [Nitrobacter hamburgensis X14]
Length = 231
Score = 281 bits (720), Expect = 4e-74, Method: Composition-based stats.
Identities = 132/226 (58%), Positives = 181/226 (80%), Gaps = 4/226 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RLG+N TW+SRW+A +EYG LLHED++IRE L LKQA VA+I+IER
Sbjct: 1 MGQKINPIGLRLGINRTWDSRWYAGKNEYGRLLHEDVRIRELLHKELKQAAVARIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ ++SARPG++IGKKG DI+K+RK+++++T+S++ +++ E+ KPE++ATL+A+SI
Sbjct: 61 HKKCRVTIHSARPGVVIGKKGADIDKLRKRVADITSSDVVINIVEIRKPELDATLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
+DYG A A T +G+CG+KV++ + E+ + D P A+ + + D
Sbjct: 181 DVDYGVATAFTTFGTCGVKVWIF-KGEILEHD---PMAQDKRLAGD 222
>gi|15599453|ref|NP_252947.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa PAO1]
gi|107103770|ref|ZP_01367688.1| hypothetical protein PaerPA_01004841 [Pseudomonas aeruginosa PACS2]
gi|116052292|ref|YP_788862.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa UCBPP-PA14]
gi|152987607|ref|YP_001346229.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa PA7]
gi|218889415|ref|YP_002438279.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa LESB58]
gi|296387186|ref|ZP_06876685.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa PAb1]
gi|313111411|ref|ZP_07797216.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa 39016]
gi|27734535|sp|Q9HWE1|RS3_PSEAE RecName: Full=30S ribosomal protein S3
gi|122261441|sp|Q02T74|RS3_PSEAB RecName: Full=30S ribosomal protein S3
gi|171460872|sp|A6UZJ4|RS3_PSEA7 RecName: Full=30S ribosomal protein S3
gi|9950474|gb|AAG07645.1|AE004841_23 30S ribosomal protein S3 [Pseudomonas aeruginosa PAO1]
gi|115587513|gb|ABJ13528.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa UCBPP-PA14]
gi|150962765|gb|ABR84790.1| ribosomal protein S3 [Pseudomonas aeruginosa PA7]
gi|218769638|emb|CAW25398.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa LESB58]
gi|310883718|gb|EFQ42312.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa 39016]
Length = 228
Score = 281 bits (719), Expect = 4e-74, Method: Composition-based stats.
Identities = 112/227 (49%), Positives = 152/227 (66%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ S W+A Y L DLK+REYLQ LK A V++I I R
Sbjct: 1 MGQKVHPNGIRLGIVKEHTSVWYADRKNYADYLFADLKVREYLQDKLKSASVSRIDIHRP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ RI +++ARPG++IGKKG D+EK+R+ L+ +H+++ E+ KPE++A L+AQS+
Sbjct: 61 AQTARITIHTARPGIVIGKKGEDVEKLRQDLTKQMGVPVHINIEEIRKPELDAMLVAQSV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV+FRRAMKRAVQ+AMR GA G+K+ SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDY T A T YG G+KV++ + + + +K +
Sbjct: 181 DIDYATYEAHTTYGVIGVKVWIFKGEVIGGRQEELKPVAPAPRKKAA 227
>gi|99080096|ref|YP_612250.1| 30S ribosomal protein S3 [Ruegeria sp. TM1040]
gi|259416631|ref|ZP_05740551.1| ribosomal protein S3 [Silicibacter sp. TrichCH4B]
gi|122984457|sp|Q1GK28|RS3_SILST RecName: Full=30S ribosomal protein S3
gi|99036376|gb|ABF62988.1| SSU ribosomal protein S3P [Ruegeria sp. TM1040]
gi|259348070|gb|EEW59847.1| ribosomal protein S3 [Silicibacter sp. TrichCH4B]
Length = 239
Score = 281 bits (719), Expect = 5e-74, Method: Composition-based stats.
Identities = 129/225 (57%), Positives = 173/225 (76%), Gaps = 4/225 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+NP+ RL +N TW+SRW+A +YG LL ED+KIRE+++ KQAGVA+++IER
Sbjct: 1 MGHKVNPVGMRLQINRTWDSRWYADTKDYGDLLLEDIKIREFIKEECKQAGVARVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +++ARPG+IIGKKG DIE +RKK+++MT+SE+HL++ EV KPE++A L+ +SI
Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIEVLRKKIASMTDSELHLNIVEVRKPELDAQLVGESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVSFRRAMKRAVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY + A T YG GIKV++ + E+ + D P A R ++
Sbjct: 181 DIDYAHSEASTPYGIIGIKVWIF-KGEIMEHD---PQARDRKAQE 221
>gi|315497979|ref|YP_004086783.1| ribosomal protein s3 [Asticcacaulis excentricus CB 48]
gi|315415991|gb|ADU12632.1| ribosomal protein S3 [Asticcacaulis excentricus CB 48]
Length = 251
Score = 281 bits (719), Expect = 5e-74, Method: Composition-based stats.
Identities = 130/227 (57%), Positives = 172/227 (75%), Gaps = 4/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLGVN TW+SRWFA EY LLH+DLKIR+ L+ L AGV++I+IER
Sbjct: 1 MGQKVNPIGLRLGVNRTWDSRWFAARQEYAKLLHQDLKIRKELKEKLNAAGVSRIIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CRI +Y+ARPG++IGKKG DI+K+RK +S +T E+ L++ EV KPE+++ L+A+SI
Sbjct: 61 HKKCRITIYAARPGVVIGKKGADIDKLRKDISALTEGEVFLNLVEVRKPEVDSQLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKR++QSAMR GA G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRSIQSAMRLGAKGIRMNLSGRLGGAEIARMEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
ID+G A A T YG G+KV++ + EV + D P A+ + +++
Sbjct: 181 DIDFGFAEALTTYGIIGVKVWIF-KGEVLEHD---PMAQDKRWSQEA 223
>gi|254467163|ref|ZP_05080574.1| ribosomal protein S3 [Rhodobacterales bacterium Y4I]
gi|206688071|gb|EDZ48553.1| ribosomal protein S3 [Rhodobacterales bacterium Y4I]
Length = 236
Score = 281 bits (718), Expect = 6e-74, Method: Composition-based stats.
Identities = 132/225 (58%), Positives = 174/225 (77%), Gaps = 4/225 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RL VN TW+SRW+A +YG LL ED+KIRE+++ KQAG+A+++IER
Sbjct: 1 MGQKVNPIGMRLQVNRTWDSRWYADTKDYGDLLLEDIKIREFIKEECKQAGIARVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +++ARPG+IIGKKG DIE +RKKL+ MT+SE+HL++ EV KPE++A L+ +SI
Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIEVLRKKLAKMTDSELHLNIVEVRKPELDAQLVGESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVSFRRAMKRAVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY + A T YG GIKV++ + E+ + D P+A R ++
Sbjct: 181 DIDYAHSEAMTPYGIIGIKVWIF-KGEIMEHD---PSARDRKAQE 221
>gi|288957428|ref|YP_003447769.1| small subunit ribosomal protein S3 [Azospirillum sp. B510]
gi|288909736|dbj|BAI71225.1| small subunit ribosomal protein S3 [Azospirillum sp. B510]
Length = 249
Score = 281 bits (718), Expect = 6e-74, Method: Composition-based stats.
Identities = 131/223 (58%), Positives = 169/223 (75%), Gaps = 5/223 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RLG+N TW+SRWFA +Y LLH+DLK+R YLQ L+QAG ++++IER
Sbjct: 1 MGQKINPIGLRLGINRTWDSRWFA-KRDYANLLHQDLKLRGYLQGRLQQAGCSRVVIERP 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K RI ++SARPG++IGKKG DIEK+R +LS MT SE+ L++ E+ KPEI+A LIA++I
Sbjct: 60 AKKARITIHSARPGVVIGKKGADIEKLRLELSKMTGSEVSLNIVEIRKPEIDARLIAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV FRRAMKRAVQSAMR GA G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 120 ASQLERRVAFRRAMKRAVQSAMRLGAQGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223
IDYG A+T YG+CG+KV+V + ++ P A+ + +
Sbjct: 180 DIDYGVGTAKTTYGTCGVKVWVFKGEVMAHD----PMAQDKRM 218
>gi|83594014|ref|YP_427766.1| 30S ribosomal protein S3 [Rhodospirillum rubrum ATCC 11170]
gi|91207836|sp|Q2RQW6|RS3_RHORT RecName: Full=30S ribosomal protein S3
gi|83576928|gb|ABC23479.1| SSU ribosomal protein S3P [Rhodospirillum rubrum ATCC 11170]
Length = 223
Score = 281 bits (718), Expect = 6e-74, Method: Composition-based stats.
Identities = 132/226 (58%), Positives = 174/226 (76%), Gaps = 5/226 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N TW+SRWFA G +Y +LLH+DL I++YL+ L QAGV++I+IER
Sbjct: 1 MGQKVNPIGLRLGINRTWDSRWFA-GRDYASLLHQDLAIKKYLKSKLAQAGVSRIVIERP 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K RI +++ARPG++IGKKG DIE +RKKL MT +E+HL++ E+ KPE++A L+A++I
Sbjct: 60 AKKARITIHTARPGVVIGKKGQDIENLRKKLQVMTGNEVHLNIVEIRKPELDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA G+++ GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 120 AQQLERRVAFRRAMKRAVQSAMRLGALGIRINCGGRLGGAEIARTEWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
+DYGTA A T YG CG+KV+V + E+ + D P A+ + +
Sbjct: 180 DVDYGTAAAHTTYGVCGVKVWVF-KGEIMEHD---PMAQDKRSQDQ 221
>gi|226942784|ref|YP_002797857.1| 30S ribosomal protein S3 [Azotobacter vinelandii DJ]
gi|226717711|gb|ACO76882.1| 30S ribosomal protein S3 [Azotobacter vinelandii DJ]
Length = 228
Score = 281 bits (718), Expect = 7e-74, Method: Composition-based stats.
Identities = 112/228 (49%), Positives = 154/228 (67%), Gaps = 4/228 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ RLG+ S W+A Y L+ DLK+REYLQ LK A V++I I R
Sbjct: 1 MGQKVHPVGIRLGIVKEHTSVWYADRKNYADYLYADLKVREYLQDKLKSASVSRIDIARP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ RI +++ARPG++IGKKG D+EK+R+ L+ +H+++ E+ KPE+++ L+AQS+
Sbjct: 61 AQTARITIHTARPGIVIGKKGEDVEKLRQDLTKQMGVPVHINIEEIRKPELDSMLVAQSV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV+FRRAMKRAVQ+AMR GA G+K+ SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS----DSTIPAAEHRVVE 224
IDY T A T YG G+KV++ + + PA + +
Sbjct: 181 DIDYATYEAHTTYGVIGVKVWIFKGEVIGGQHEELKPQAPAPRKKAAK 228
>gi|70732876|ref|YP_262644.1| 30S ribosomal protein S3 [Pseudomonas fluorescens Pf-5]
gi|91207831|sp|Q4K539|RS3_PSEF5 RecName: Full=30S ribosomal protein S3
gi|68347175|gb|AAY94781.1| ribosomal protein S3 [Pseudomonas fluorescens Pf-5]
Length = 228
Score = 281 bits (718), Expect = 7e-74, Method: Composition-based stats.
Identities = 113/228 (49%), Positives = 152/228 (66%), Gaps = 4/228 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI RLG+ S W+A G Y L DL +REYLQ LK A V++I I R
Sbjct: 1 MGQKVHPIGIRLGIVKEHTSVWYADGRTYADYLLADLNVREYLQDKLKSASVSRIDIHRP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ RI +++ARPG++IGKKG D+EK+R+ L+ +H+++ E+ KPE++ L+AQS+
Sbjct: 61 AQTARITIHTARPGIVIGKKGEDVEKLRQDLTKQMGVPVHINIEEIRKPELDGMLVAQSV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV+FRRAMKRAVQ+AMR GA G+K+ SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS----DSTIPAAEHRVVE 224
IDY T A T YG G+KV++ + + PA + +
Sbjct: 181 DIDYATYEAHTTYGVIGVKVWIFKGEVIGGRQEELKPQAPAPRKKAAK 228
>gi|254475420|ref|ZP_05088806.1| ribosomal protein S3 [Ruegeria sp. R11]
gi|214029663|gb|EEB70498.1| ribosomal protein S3 [Ruegeria sp. R11]
Length = 235
Score = 281 bits (718), Expect = 7e-74, Method: Composition-based stats.
Identities = 128/225 (56%), Positives = 173/225 (76%), Gaps = 4/225 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+NP+ RL VN TW+SRW+A +YG LL EDL+IR++++ KQAG+A+++IER
Sbjct: 1 MGHKVNPVGMRLQVNRTWDSRWYADTKDYGDLLLEDLRIRDFIKEECKQAGIARVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +++ARPG+IIGKKG DIE +RKK+++MT+SE+HL++ EV KPE++A L+ +SI
Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIEVLRKKIASMTDSELHLNIVEVRKPELDAQLVGESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVSFRRAMKRAVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY + A T YG GIKV++ + E+ + D P A R ++
Sbjct: 181 DIDYAHSEASTPYGIIGIKVWIF-KGEIMEHD---PQARDRKAQE 221
>gi|217976761|ref|YP_002360908.1| ribosomal protein S3 [Methylocella silvestris BL2]
gi|254764535|sp|B8ELF7|RS3_METSB RecName: Full=30S ribosomal protein S3
gi|217502137|gb|ACK49546.1| ribosomal protein S3 [Methylocella silvestris BL2]
Length = 239
Score = 280 bits (717), Expect = 8e-74, Method: Composition-based stats.
Identities = 140/226 (61%), Positives = 179/226 (79%), Gaps = 3/226 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N TW+SRWFA +EYG LLHED+ IR L LKQA V+KI+IER
Sbjct: 1 MGQKVNPIGLRLGINRTWDSRWFAGKNEYGKLLHEDMAIRAALMKTLKQAAVSKIIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ ++SARPG++IGKKG DI+KIRK ++ MT+SE+ +++ EV KPEI+ATL+A SI
Sbjct: 61 HKKCRVTIHSARPGVVIGKKGADIDKIRKLVAKMTDSEVLINIVEVRKPEIDATLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARLEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
+DYGTA A TAYG+CGIKV++ + E+ + D A + ++ E+D
Sbjct: 181 DVDYGTATAHTAYGACGIKVWIF-KGEILEHDPM--AQDKKMAEQD 223
>gi|146308917|ref|YP_001189382.1| 30S ribosomal protein S3 [Pseudomonas mendocina ymp]
gi|330505201|ref|YP_004382070.1| 30S ribosomal protein S3 [Pseudomonas mendocina NK-01]
gi|172046042|sp|A4XZ84|RS3_PSEMY RecName: Full=30S ribosomal protein S3
gi|145577118|gb|ABP86650.1| SSU ribosomal protein S3P [Pseudomonas mendocina ymp]
gi|328919487|gb|AEB60318.1| 30S ribosomal protein S3 [Pseudomonas mendocina NK-01]
Length = 228
Score = 280 bits (717), Expect = 8e-74, Method: Composition-based stats.
Identities = 112/228 (49%), Positives = 154/228 (67%), Gaps = 3/228 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ RLG+ S W+A G Y L+ DLK+R YLQ LK A V++I I R
Sbjct: 1 MGQKVHPVGIRLGIVKDHTSVWYADGRNYADYLNADLKVRAYLQDKLKSASVSRIDIARP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ RI +++ARPG++IGKKG D+EK+R+ L+ +H+++ E+ KPE++ L+AQS+
Sbjct: 61 AQTARITIHTARPGIVIGKKGEDVEKLRQDLTKQMGVPVHINIEEIRKPELDGMLVAQSV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV+FRRAMKRAVQ+AMR GA G+K+ SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP---AAEHRVVEK 225
IDY T A T YG G+KV++ + + + A + +K
Sbjct: 181 DIDYATYEAHTTYGVIGVKVWIFKGEVIGGRTEELKPQAPAPRKAAKK 228
>gi|121602435|ref|YP_989003.1| 30S ribosomal protein S3 [Bartonella bacilliformis KC583]
gi|121602523|ref|YP_988973.1| 30S ribosomal protein S3 [Bartonella bacilliformis KC583]
gi|152060847|sp|A1USM0|RS3_BARBK RecName: Full=30S ribosomal protein S3
gi|120614612|gb|ABM45213.1| ribosomal protein S3 [Bartonella bacilliformis KC583]
gi|120614700|gb|ABM45301.1| ribosomal protein S3 [Bartonella bacilliformis KC583]
Length = 236
Score = 280 bits (717), Expect = 9e-74, Method: Composition-based stats.
Identities = 145/227 (63%), Positives = 178/227 (78%), Gaps = 3/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RLGVN TW+SRW+A EYG LLHEDLKIR Y+ LKQA ++K++IER
Sbjct: 1 MGQKINPIGLRLGVNQTWSSRWYADSGEYGRLLHEDLKIRSYVMEELKQAAISKVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ ++SARPGLIIGKKG DIEK+R +LS MTN+E L++ E+ KPEI+AT+IAQS+
Sbjct: 61 HKKCRVTIHSARPGLIIGKKGADIEKLRHQLSEMTNAETSLNIVEIRKPEIDATIIAQSV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
+DY TA A TAYG CG+KV+V + E+ + D A+EHR D+
Sbjct: 181 DVDYSTAEARTAYGVCGVKVWVF-KGEILEHDPM--ASEHRATRNDN 224
>gi|319407420|emb|CBI81071.1| 30S ribosomal protein S3 [Bartonella sp. 1-1C]
Length = 236
Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 147/226 (65%), Positives = 181/226 (80%), Gaps = 3/226 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RLG+N TW+SRW+A EYG LLHED+KIR Y+ LKQA V+K++IER
Sbjct: 1 MGQKINPIGLRLGINRTWDSRWYADSGEYGRLLHEDVKIRLYVVEELKQAAVSKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CRI ++SARPGLIIGK+G DIEK+R+KLS MTN+E L++ E+ KPEI++T+IAQSI
Sbjct: 61 HKKCRITIHSARPGLIIGKRGADIEKLRRKLSEMTNAETSLNIVEIRKPEIDSTIIAQSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
+DYGTA A+TAYG CG+KV+V + E+ + D A+E R VE D
Sbjct: 181 DVDYGTAEAKTAYGICGVKVWVF-KGEILEHDPM--ASERRAVEGD 223
>gi|84503636|ref|ZP_01001674.1| 30S ribosomal protein S3 [Oceanicola batsensis HTCC2597]
gi|84387933|gb|EAQ00985.1| 30S ribosomal protein S3 [Oceanicola batsensis HTCC2597]
Length = 240
Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 132/225 (58%), Positives = 173/225 (76%), Gaps = 4/225 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RL VN TW+SRW+A +YG LL ED+++RE+++ KQAGVA+I+IER
Sbjct: 1 MGQKVNPIGMRLQVNRTWDSRWYADTKDYGDLLLEDVRMREFIKEECKQAGVARIIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +++ARPG+IIGKKG DIE +RKKL+ MT+SE+HL++ EV KPE++A L+ +SI
Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIEVLRKKLAKMTDSELHLNIVEVRKPELDAALVGESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVSFRRAMKRAVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY + A T YG GIKV++ + E+ + D P A R ++
Sbjct: 181 DIDYAHSEASTPYGIIGIKVWIF-KGEILEHD---PQARDRRAQE 221
>gi|209964046|ref|YP_002296961.1| 30S ribosomal protein S3 [Rhodospirillum centenum SW]
gi|226697750|sp|B6IRR2|RS3_RHOCS RecName: Full=30S ribosomal protein S3
gi|209957512|gb|ACI98148.1| ribosomal protein S3 [Rhodospirillum centenum SW]
Length = 225
Score = 280 bits (716), Expect = 1e-73, Method: Composition-based stats.
Identities = 127/227 (55%), Positives = 170/227 (74%), Gaps = 5/227 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ RLG+N TW+SRWFA +Y LLH+DLK+R++LQ L+ AGV++I+IER
Sbjct: 1 MGQKVNPVGLRLGINRTWDSRWFA-ARDYAVLLHQDLKLRKFLQGKLQAAGVSRIVIERP 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ +++ARPG++IGKKG DIEK+R L M E+ L++ E+ KPE++A LIA++I
Sbjct: 60 AKKARVTIHTARPGVVIGKKGADIEKLRGTLGTMAGGEVSLNIVEIRKPELDARLIAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV FRRAMKRAVQSAMR GA G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 120 ASQLERRVAFRRAMKRAVQSAMRLGAQGIRINCSGRLGGAEIARLEWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYGTA A+T YG+CG+KV+V + E+ D P A+ + + +
Sbjct: 180 DIDYGTATAKTTYGTCGVKVWVF-KGEILAHD---PMAQDKRAMEQA 222
>gi|288942066|ref|YP_003444306.1| 30S ribosomal protein S3 [Allochromatium vinosum DSM 180]
gi|288897438|gb|ADC63274.1| ribosomal protein S3 [Allochromatium vinosum DSM 180]
Length = 225
Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats.
Identities = 109/219 (49%), Positives = 159/219 (72%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ W S+W+A +Y LL+ DL++R++L+ L +A V++I I+R
Sbjct: 1 MGQKVHPNGIRLGIVKDWTSKWYANSKDYADLLNTDLQVRDFLRKELAKASVSRIQIDRP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN I +++ARPG++IGKKG DI+K+R K+S M +H+++ E+ KPE++A L+A+ I
Sbjct: 61 AKNAHITIHTARPGVVIGKKGEDIDKLRAKVSEMMGIPVHIAIEEIRKPELDAQLVAEGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERR++FRRAMKR++Q+ MR GA+G+KV +GRLNGAE++R+E EGRVPL TLRA
Sbjct: 121 AQQLERRIMFRRAMKRSIQNTMRLGAEGIKVSVAGRLNGAEIARSEWAREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDYG A A+T YG G+KV++ + D PA +
Sbjct: 181 DIDYGFAEAKTTYGVLGVKVWIFKGEVFGDQLPEEPAPK 219
>gi|209884819|ref|YP_002288676.1| ribosomal protein S3 [Oligotropha carboxidovorans OM5]
gi|226697738|sp|B6JET9|RS3_OLICO RecName: Full=30S ribosomal protein S3
gi|209873015|gb|ACI92811.1| ribosomal protein S3 [Oligotropha carboxidovorans OM5]
Length = 233
Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats.
Identities = 132/226 (58%), Positives = 176/226 (77%), Gaps = 4/226 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RLG+N TW+SRWFA +Y LLHED++IRE L LKQA VA+I+IER
Sbjct: 1 MGQKINPIGLRLGINRTWDSRWFAGKGDYAKLLHEDVRIREVLMKELKQAAVARIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ VYSARPG++IGKKG DI+K++KK++ +T S++ +++ E+ KPE++ATL+A+SI
Sbjct: 61 HKKCRVSVYSARPGVVIGKKGADIDKLKKKVAEITESDVVINIVEIRKPELDATLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAQGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
+DYG A A T +G+CG+KV++ + E+ + D P A+ + + +
Sbjct: 181 DVDYGVATAFTTFGTCGVKVWLF-KGEILEHD---PMAQDKRLNEG 222
>gi|119899700|ref|YP_934913.1| 30S ribosomal protein S3 [Azoarcus sp. BH72]
gi|152060845|sp|A1KB21|RS3_AZOSB RecName: Full=30S ribosomal protein S3
gi|119672113|emb|CAL96027.1| 30S ribosomal protein S3 [Azoarcus sp. BH72]
Length = 260
Score = 279 bits (715), Expect = 1e-73, Method: Composition-based stats.
Identities = 121/230 (52%), Positives = 169/230 (73%), Gaps = 3/230 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V W SRWFA ++ +LHEDLK+R+YL+ L A V +++IER
Sbjct: 1 MGQKIHPTGFRLAVTRDWGSRWFASSRDFSKMLHEDLKVRDYLKKRLAHASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN R+ ++SARPG++IGKKG DIE +++ L + +H+++ EV KPEI+A LIA SI
Sbjct: 61 AKNARVTLFSARPGVVIGKKGEDIEALKRDLQKIVGVPVHVNIEEVRKPEIDAKLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNGAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI---PAAEHRVVEKDS 227
+IDYG + A+T YG GIKV+V + + ++ + P A++R + +
Sbjct: 181 NIDYGVSEAQTTYGVIGIKVWVFKGEMLGRNEQPVVAEPEADNRRGRRGA 230
>gi|296116726|ref|ZP_06835336.1| 30S ribosomal protein S3 [Gluconacetobacter hansenii ATCC 23769]
gi|295976938|gb|EFG83706.1| 30S ribosomal protein S3 [Gluconacetobacter hansenii ATCC 23769]
Length = 225
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 125/227 (55%), Positives = 170/227 (74%), Gaps = 5/227 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+NPI RLG+N TW+SRW+A ++Y LLH+DLK+R YL+ L AGV++++IER
Sbjct: 1 MGHKVNPIGLRLGINRTWDSRWYAD-ADYARLLHDDLKLRSYLRRKLSGAGVSRVVIERP 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ +Y+ARPG++IGKKG DI+ +RK L+ M +++ L++ E+ KPEI+ATL+A +I
Sbjct: 60 AKKPRVTIYAARPGVVIGKKGQDIDVLRKDLTRMAKTDVALNIVEIRKPEIDATLVADNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 120 AQQLERRVAFRRAMKRAVQSAMRLGAQGIRINCSGRLGGAEIARVEWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYG A A+T YG+CG+KV++ + E+ D P A+ R + +
Sbjct: 180 DIDYGVATAKTTYGTCGVKVWIF-KGEILAHD---PLAQDRRAAEQA 222
>gi|330993852|ref|ZP_08317784.1| 30S ribosomal protein S3 [Gluconacetobacter sp. SXCC-1]
gi|329759120|gb|EGG75632.1| 30S ribosomal protein S3 [Gluconacetobacter sp. SXCC-1]
Length = 225
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 125/227 (55%), Positives = 171/227 (75%), Gaps = 5/227 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+NPI RLG+N TW+SRW+A ++Y LLH+DLK+R YL+ L AGV++++IER
Sbjct: 1 MGHKVNPIGLRLGINRTWDSRWYAD-ADYARLLHDDLKLRAYLRRKLSGAGVSRVVIERP 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ +Y+ARPG++IGKKG DI+ +RK L+ M +++ L++ E+ KPEI+ATL+A++I
Sbjct: 60 AKKPRVTIYAARPGVVIGKKGQDIDVLRKDLARMAKTDVALNIVEIRKPEIDATLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 120 AQQLERRVAFRRAMKRAVQSAMRLGAQGIRINCSGRLGGAEIARIEWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYG A A+T YG+CG+KV++ + E+ D P A+ R + +
Sbjct: 180 DIDYGVATAKTTYGTCGVKVWIF-KGEILAHD---PLAQDRRAAEQA 222
>gi|167645584|ref|YP_001683247.1| 30S ribosomal protein S3 [Caulobacter sp. K31]
gi|189044963|sp|B0T2C8|RS3_CAUSK RecName: Full=30S ribosomal protein S3
gi|167348014|gb|ABZ70749.1| ribosomal protein S3 [Caulobacter sp. K31]
Length = 249
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 129/226 (57%), Positives = 171/226 (75%), Gaps = 3/226 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ RLG+N TW+SRWFA G +YG LLH+DL +R L+ L QAGV++I+IER
Sbjct: 1 MGQKVNPVGLRLGINRTWDSRWFADGEQYGKLLHQDLAVRAMLKKRLYQAGVSRIIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +Y+ARPG+IIGKKG DI+K+RK LS MT E+HL++ E+ KPE +A L+A+SI
Sbjct: 61 HKKCRVTIYAARPGVIIGKKGADIDKLRKDLSVMTEGEVHLNIVEIRKPETDAQLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERR+ FRRAMKR++QSA+R GA G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRIAFRRAMKRSIQSAVRLGAKGIRINVSGRLGGAEIARMEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDYG A A+T YG G+K ++ + EV + D A + R+ +
Sbjct: 181 DIDYGFAEAKTTYGIIGVKTWIF-KGEVLEHDPM--ALDKRLATES 223
>gi|330953191|gb|EGH53451.1| 30S ribosomal protein S3 [Pseudomonas syringae Cit 7]
Length = 228
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 113/228 (49%), Positives = 152/228 (66%), Gaps = 4/228 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI RLG+ S W+A G Y L DLK+REYLQ LK A V++I I R
Sbjct: 1 MGQKVHPIGIRLGIVKEHTSVWYADGRTYADYLFADLKVREYLQNKLKSASVSRIDIHRP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ RI +++ARPG++IGKKG D+EK+R+ L+ +H+++ E+ KPE++ L+AQS+
Sbjct: 61 AQTARITIHTARPGIVIGKKGEDVEKLRQDLTKQMGVPVHINIEEIRKPELDGMLVAQSV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV+FRRAMKRAVQ+AMR GA G+K+ SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS----DSTIPAAEHRVVE 224
IDY A T YG G+KV++ + + PA + +
Sbjct: 181 DIDYANYEAHTTYGVIGVKVWIFKGEVIGGRQEELKPQAPAPRKKAAK 228
>gi|28867860|ref|NP_790479.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. tomato str.
DC3000]
gi|66047769|ref|YP_237610.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. syringae B728a]
gi|71736756|ref|YP_276700.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. phaseolicola
1448A]
gi|77461294|ref|YP_350801.1| 30S ribosomal protein S3 [Pseudomonas fluorescens Pf0-1]
gi|213969220|ref|ZP_03397358.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. tomato T1]
gi|229592897|ref|YP_002875016.1| 30S ribosomal protein S3 [Pseudomonas fluorescens SBW25]
gi|237797438|ref|ZP_04585899.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. oryzae str. 1_6]
gi|257483191|ref|ZP_05637232.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|289623843|ref|ZP_06456797.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289648936|ref|ZP_06480279.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. aesculi str.
2250]
gi|289675494|ref|ZP_06496384.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. syringae FF5]
gi|301381727|ref|ZP_07230145.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. tomato Max13]
gi|302061073|ref|ZP_07252614.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. tomato K40]
gi|302130786|ref|ZP_07256776.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|302189283|ref|ZP_07265956.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. syringae 642]
gi|312963362|ref|ZP_07777845.1| ribosomal protein S3 [Pseudomonas fluorescens WH6]
gi|330812069|ref|YP_004356531.1| 30S ribosomal protein S3 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|34098361|sp|Q889W5|RS3_PSESM RecName: Full=30S ribosomal protein S3
gi|81307864|sp|Q4ZMQ0|RS3_PSEU2 RecName: Full=30S ribosomal protein S3
gi|91207830|sp|Q48D42|RS3_PSE14 RecName: Full=30S ribosomal protein S3
gi|91207833|sp|Q3K5Z4|RS3_PSEPF RecName: Full=30S ribosomal protein S3
gi|28851096|gb|AAO54174.1| ribosomal protein S3 [Pseudomonas syringae pv. tomato str. DC3000]
gi|63258476|gb|AAY39572.1| ribosomal protein S3 [Pseudomonas syringae pv. syringae B728a]
gi|71557309|gb|AAZ36520.1| ribosomal protein S3 [Pseudomonas syringae pv. phaseolicola 1448A]
gi|77385297|gb|ABA76810.1| 30S ribosomal protein S3 [Pseudomonas fluorescens Pf0-1]
gi|213925898|gb|EEB59455.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. tomato T1]
gi|229364763|emb|CAY52756.1| 30S ribosomal protein S3 [Pseudomonas fluorescens SBW25]
gi|311282442|gb|EFQ61040.1| ribosomal protein S3 [Pseudomonas fluorescens WH6]
gi|320322316|gb|EFW78410.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. glycinea str.
B076]
gi|320331974|gb|EFW87910.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. glycinea str.
race 4]
gi|327380177|gb|AEA71527.1| 30S ribosomal protein S3 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|330869425|gb|EGH04134.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|330879375|gb|EGH13524.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. glycinea str.
race 4]
gi|330879436|gb|EGH13585.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. morsprunorum
str. M302280PT]
gi|330891925|gb|EGH24586.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. mori str.
301020]
gi|330899731|gb|EGH31150.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. japonica str.
M301072PT]
gi|330944849|gb|EGH46717.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. pisi str. 1704B]
gi|330962519|gb|EGH62779.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. maculicola str.
ES4326]
gi|330966905|gb|EGH67165.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. actinidiae str.
M302091]
gi|330969815|gb|EGH69881.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. aceris str.
M302273PT]
gi|330976646|gb|EGH76690.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. aptata str. DSM
50252]
gi|330988276|gb|EGH86379.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|331012419|gb|EGH92475.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|331018166|gb|EGH98222.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. lachrymans str.
M302278PT]
gi|331020288|gb|EGI00345.1| 30S ribosomal protein S3 [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 228
Score = 279 bits (714), Expect = 2e-73, Method: Composition-based stats.
Identities = 113/228 (49%), Positives = 152/228 (66%), Gaps = 4/228 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI RLG+ S W+A G Y L DLK+REYLQ LK A V++I I R
Sbjct: 1 MGQKVHPIGIRLGIVKEHTSVWYADGRTYADYLFADLKVREYLQDKLKSASVSRIDIHRP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ RI +++ARPG++IGKKG D+EK+R+ L+ +H+++ E+ KPE++ L+AQS+
Sbjct: 61 AQTARITIHTARPGIVIGKKGEDVEKLRQDLTKQMGVPVHINIEEIRKPELDGMLVAQSV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV+FRRAMKRAVQ+AMR GA G+K+ SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS----DSTIPAAEHRVVE 224
IDY A T YG G+KV++ + + PA + +
Sbjct: 181 DIDYANYEAHTTYGVIGVKVWIFKGEVIGGRQEELKPQAPAPRKKAAK 228
>gi|294675862|ref|YP_003576477.1| 30S ribosomal protein S3 [Rhodobacter capsulatus SB 1003]
gi|294474682|gb|ADE84070.1| 30S ribosomal protein S3 [Rhodobacter capsulatus SB 1003]
Length = 238
Score = 279 bits (713), Expect = 2e-73, Method: Composition-based stats.
Identities = 131/225 (58%), Positives = 169/225 (75%), Gaps = 4/225 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RL VN TW+SRWFA +YG LL EDL++RE++ KQAG+A+++IER
Sbjct: 1 MGQKVNPIGMRLQVNRTWDSRWFAESKDYGNLLLEDLRMREFIHEEAKQAGIARVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +++ARPG+IIGKKG DIE +RKKL+N T SE+HL++ EV KPE+++ L+A+SI
Sbjct: 61 HKKCRVTIHAARPGVIIGKKGADIETLRKKLANFTASELHLNIVEVRKPELDSQLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLERRV FRRAMKRAVQ+AMR GA G++V SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 CQQLERRVSFRRAMKRAVQNAMRMGALGIRVNVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY A T YG G+KV++ + E+ + D P A R +
Sbjct: 181 DIDYALDEAMTPYGIIGVKVWIF-KGEIMEHD---PQARDRKAAE 221
>gi|83858560|ref|ZP_00952082.1| 30S ribosomal protein S3 [Oceanicaulis alexandrii HTCC2633]
gi|83853383|gb|EAP91235.1| 30S ribosomal protein S3 [Oceanicaulis alexandrii HTCC2633]
Length = 234
Score = 279 bits (713), Expect = 2e-73, Method: Composition-based stats.
Identities = 132/223 (59%), Positives = 172/223 (77%), Gaps = 4/223 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI R+G+N TW SRWFA+G EY LLHEDL+IREYL+ LK A V++I+IER
Sbjct: 1 MGQKVNPIGLRVGINRTWESRWFAKGEEYADLLHEDLRIREYLKKELKNASVSRIIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CRI +++ARPG++IGKKG DIEK+R+K+S M E+ L++ EV KPE++ATL+A+S+
Sbjct: 61 HKKCRITIHTARPGVVIGKKGADIEKLRRKVSKMVEGEVFLNLVEVRKPEVDATLVAESV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKR++Q+AMR GA G K++ GRL GAE++R E Y EG VPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRSLQTAMRMGALGCKIMCGGRLGGAEIARVEKYSEGSVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223
IDYG A A+TA G GIKV++ + E+ + D P A+ R +
Sbjct: 181 DIDYGFAEAKTAMGIIGIKVWIY-KGEIMEHD---PMAQERRM 219
>gi|163868644|ref|YP_001609853.1| 30S ribosomal protein S3 [Bartonella tribocorum CIP 105476]
gi|189044952|sp|A9IW20|RS3_BART1 RecName: Full=30S ribosomal protein S3
gi|161018300|emb|CAK01858.1| 30S ribosomal protein S3 [Bartonella tribocorum CIP 105476]
Length = 236
Score = 279 bits (713), Expect = 2e-73, Method: Composition-based stats.
Identities = 146/226 (64%), Positives = 180/226 (79%), Gaps = 3/226 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RLGVN TW+SRW+A EYG LLHEDL+IR Y+ L+QA ++K++IER
Sbjct: 1 MGQKINPIGLRLGVNRTWDSRWYADSGEYGRLLHEDLRIRSYVLEELRQAAISKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ ++SARPGLIIGKKG DIEK+R+KLS MTN+E L++ E+ KPEI+AT+IAQSI
Sbjct: 61 HKKCRVTIHSARPGLIIGKKGADIEKLRRKLSEMTNAETSLNIVEIRKPEIDATIIAQSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLR+
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRS 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
+DYGTA A+TAYG CGIKV+V + E+ + D A+E R E D
Sbjct: 181 DVDYGTAEAKTAYGICGIKVWVF-KGEILEHDPM--ASERRATEAD 223
>gi|149915850|ref|ZP_01904374.1| 30S ribosomal protein S3 [Roseobacter sp. AzwK-3b]
gi|149810173|gb|EDM70019.1| 30S ribosomal protein S3 [Roseobacter sp. AzwK-3b]
Length = 235
Score = 279 bits (713), Expect = 2e-73, Method: Composition-based stats.
Identities = 129/225 (57%), Positives = 173/225 (76%), Gaps = 4/225 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+NPI RL VN TW+SRW+A +YG LL EDLKIR++++ KQAG+++++IER
Sbjct: 1 MGNKVNPIGMRLQVNRTWDSRWYADTKDYGNLLLEDLKIRDFIEKECKQAGISRVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +++ARPG+IIGKKG DIE +RKKL+ MT+SE+HL++ EV KPE++A L+A+SI
Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIEGLRKKLARMTDSELHLNIVEVRKPELDAALVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKR+VQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVSFRRAMKRSVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY A T YG G+KV++ + E+ + D P+A R ++
Sbjct: 181 DIDYAHKEAVTPYGIIGVKVWIF-KGEIMEHD---PSARDRKAQE 221
>gi|58038849|ref|YP_190813.1| 30S ribosomal protein S3 [Gluconobacter oxydans 621H]
gi|62287182|sp|Q5FTY9|RS3_GLUOX RecName: Full=30S ribosomal protein S3
gi|58001263|gb|AAW60157.1| SSU ribosomal protein S3P [Gluconobacter oxydans 621H]
Length = 225
Score = 279 bits (713), Expect = 2e-73, Method: Composition-based stats.
Identities = 127/227 (55%), Positives = 172/227 (75%), Gaps = 5/227 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+NPI RLGVN TW+SRW+A G +Y LLHEDLK+R +L+ L AGV++++IER
Sbjct: 1 MGHKVNPIGLRLGVNRTWDSRWYA-GQDYARLLHEDLKLRAFLRRKLSGAGVSRVVIERP 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ +Y+ARPG++IGKKG DI+ +RK+LS M +++ L++ E+ KPEI+ATL+A++I
Sbjct: 60 AKKPRVTIYAARPGVVIGKKGQDIDALRKELSRMAKTDVALNIVEIRKPEIDATLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRA+QSAMR GA G+++ GRL GAE++R E Y EGRVPL TLRA
Sbjct: 120 AQQLERRVAFRRAMKRAIQSAMRLGAQGIRITCGGRLGGAEIARAEKYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYGTA A+T YG+CG+KV++ + E+ D P A+ R + +
Sbjct: 180 DIDYGTATAKTTYGTCGVKVWIF-KGEILAHD---PLAQDRRAAEQA 222
>gi|319899093|ref|YP_004159186.1| 30S ribosomal protein S3 [Bartonella clarridgeiae 73]
gi|319403057|emb|CBI76612.1| 30S ribosomal protein S3 [Bartonella clarridgeiae 73]
Length = 236
Score = 279 bits (713), Expect = 2e-73, Method: Composition-based stats.
Identities = 148/226 (65%), Positives = 180/226 (79%), Gaps = 3/226 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RLGVN TW+SRW+A EYG LLHEDLKIR Y+ LKQA ++K++IER
Sbjct: 1 MGQKINPIGLRLGVNRTWDSRWYADSDEYGRLLHEDLKIRLYVIEELKQAAISKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CRI ++SARPGLIIGKKG DIEK+R+KLS MTN+E L++ E+ KPEI++T+IAQSI
Sbjct: 61 HKKCRITIHSARPGLIIGKKGADIEKLRRKLSEMTNAETSLNIIEIRKPEIDSTIIAQSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
+DYGTA A+TAYG CG+KV+V + E+ + D A+E R E D
Sbjct: 181 DVDYGTAEAKTAYGICGVKVWVF-KGEILEHDPM--ASERRATEGD 223
>gi|146281176|ref|YP_001171329.1| 30S ribosomal protein S3 [Pseudomonas stutzeri A1501]
gi|152060896|sp|A4VHN6|RS3_PSEU5 RecName: Full=30S ribosomal protein S3
gi|145569381|gb|ABP78487.1| ribosomal protein S3 [Pseudomonas stutzeri A1501]
gi|327479329|gb|AEA82639.1| 30S ribosomal protein S3 [Pseudomonas stutzeri DSM 4166]
Length = 228
Score = 279 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 113/228 (49%), Positives = 152/228 (66%), Gaps = 4/228 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ S W+A G Y L DL +REYLQ LK A V++I I R
Sbjct: 1 MGQKVHPTGIRLGIVKEHTSVWYADGRTYADYLLADLNVREYLQDKLKSASVSRIDIHRP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ RI +++ARPG++IGKKG D+EK+R+ L+ +H+++ E+ KPE++A L+AQS+
Sbjct: 61 AQTARITIHTARPGIVIGKKGEDVEKLRQDLTKQMGVPVHINIEEIRKPELDAMLVAQSV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV+FRRAMKRAVQ+AMR GA G+K+ SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS----DSTIPAAEHRVVE 224
IDY T A T YG G+KV++ + + PA + +
Sbjct: 181 DIDYNTYEAHTTYGVIGVKVWIFKGEVIGGRHEELKPQAPAPRKKAAK 228
>gi|254421013|ref|ZP_05034737.1| ribosomal protein S3 [Brevundimonas sp. BAL3]
gi|196187190|gb|EDX82166.1| ribosomal protein S3 [Brevundimonas sp. BAL3]
Length = 251
Score = 279 bits (713), Expect = 3e-73, Method: Composition-based stats.
Identities = 135/227 (59%), Positives = 174/227 (76%), Gaps = 4/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RLGVN TW+SRWFA G++Y LLH+DLK+RE+L+ L AGV++I+IER
Sbjct: 1 MGQKINPIGLRLGVNRTWDSRWFAAGADYSRLLHQDLKLREWLRERLAAAGVSRIIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CRI +Y+ARPG++IGKKG DIEK+RK +S T E+HL++ EV KPE +A LIA++I
Sbjct: 61 HKKCRITIYAARPGVVIGKKGADIEKLRKDISAQTEGEVHLNIIEVRKPETDAQLIAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKR++QSAMR GA G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRSMQSAMRLGAKGIRMNVSGRLGGAEIARMEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYG A+T YG G+KV+V + EV + D P A+ + +++
Sbjct: 181 DIDYGFYEAKTTYGIIGVKVWVF-KGEVLEHD---PMAQDKRWAQEA 223
>gi|312115693|ref|YP_004013289.1| ribosomal protein S3 [Rhodomicrobium vannielii ATCC 17100]
gi|311220822|gb|ADP72190.1| ribosomal protein S3 [Rhodomicrobium vannielii ATCC 17100]
Length = 254
Score = 278 bits (712), Expect = 3e-73, Method: Composition-based stats.
Identities = 129/226 (57%), Positives = 172/226 (76%), Gaps = 1/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N TW+SRW+A EYG LLHED +IRE++ +QAG++K++IER
Sbjct: 1 MGQKVNPIGLRLGINRTWDSRWYADKGEYGRLLHEDFRIREFIMKQRRQAGISKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
H+ CR+ V++ARPG++IGKKG DIEK+R +L+ T SE++L++ EV KPE++ATL A+ I
Sbjct: 61 HRKCRVTVHTARPGILIGKKGADIEKLRGQLAKFTTSEVYLNIVEVRKPELDATLAAEGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRA QSA+R GA GV++ +GRL GAE++R E YL+GRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRATQSALRLGAQGVRIYVAGRLGGAEIARMEWYLDGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDYGTAVAETAYG G+KV++ + E+ + D ++
Sbjct: 181 DIDYGTAVAETAYGVIGVKVWIF-KGEILEHDPMAQERRSLESQES 225
>gi|154253183|ref|YP_001414007.1| 30S ribosomal protein S3 [Parvibaculum lavamentivorans DS-1]
gi|171769631|sp|A7HWR7|RS3_PARL1 RecName: Full=30S ribosomal protein S3
gi|154157133|gb|ABS64350.1| ribosomal protein S3 [Parvibaculum lavamentivorans DS-1]
Length = 236
Score = 278 bits (712), Expect = 4e-73, Method: Composition-based stats.
Identities = 139/224 (62%), Positives = 181/224 (80%), Gaps = 3/224 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+NPI RLG+N TW+SRWFA EYG LLHED+KIRE L+ LKQAG++KI+IER
Sbjct: 1 MGHKVNPIGLRLGINRTWDSRWFAGRHEYGKLLHEDIKIREVLEKQLKQAGISKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +++ARPG++IGKKG DIEK+R+++ +T SE+HL++ EV KPEI+ATL+A++I
Sbjct: 61 HKKCRVAIHTARPGVVIGKKGADIEKLRREIGKITASEVHLNIVEVRKPEIDATLVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA G+++ +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAGGIRINCAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
IDYG A A+TAYG+CG+KV++ + E+ + D A+E R +E
Sbjct: 181 DIDYGVATAKTAYGTCGVKVWIY-KGEILEHDPM--ASERRALE 221
>gi|89070551|ref|ZP_01157840.1| 30S ribosomal protein S3 [Oceanicola granulosus HTCC2516]
gi|89043858|gb|EAR50056.1| 30S ribosomal protein S3 [Oceanicola granulosus HTCC2516]
Length = 235
Score = 278 bits (711), Expect = 4e-73, Method: Composition-based stats.
Identities = 128/225 (56%), Positives = 172/225 (76%), Gaps = 4/225 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+NPI RL VN TW+SRW+A +YG LL ED+KIRE+++ KQAG+++++IER
Sbjct: 1 MGNKVNPIGMRLQVNRTWDSRWYADTKDYGDLLLEDIKIREFIKEECKQAGISRVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
H+ CR+ +++ARPG+IIGKKG DIE +RKKL+ MT+SE+HL++ EV KPE++A L+ +SI
Sbjct: 61 HRKCRVTIHTARPGVIIGKKGADIETLRKKLAKMTDSELHLNIVEVRKPELDAALVGESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKR+VQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVSFRRAMKRSVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY + A T YG GIKV++ + E+ + D P A R ++
Sbjct: 181 DIDYAHSEAVTPYGIIGIKVWIF-KGEIMEHD---PQARDRKAQE 221
>gi|257095034|ref|YP_003168675.1| 30S ribosomal protein S3 [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257047558|gb|ACV36746.1| ribosomal protein S3 [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
Length = 282
Score = 278 bits (711), Expect = 4e-73, Method: Composition-based stats.
Identities = 116/225 (51%), Positives = 161/225 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V W+SRW+A + +L+ED+K+REYL+ LK A V +ILIER
Sbjct: 1 MGQKIHPAGFRLAVTRDWSSRWYANKKNFAGMLNEDIKVREYLKKKLKHASVGRILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN R+ ++SARPG++IGKKG +I+ +R L + +H+S+ E+ KPE++A LIA SI
Sbjct: 61 AKNARVTIFSARPGVVIGKKGEEIDHLRVALQKIMGVPVHVSIEEIRKPELDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNGAE++R E Y EGRVPL TLRA
Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGAEIARREWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY T+ A T YG G+KV+V + ++ + + E E+
Sbjct: 181 DIDYATSEALTTYGLIGVKVWVFKGEILNRQEQAALSPEAAADER 225
>gi|319404419|emb|CBI78022.1| 30S ribosomal protein S3 [Bartonella rochalimae ATCC BAA-1498]
Length = 236
Score = 278 bits (710), Expect = 5e-73, Method: Composition-based stats.
Identities = 146/226 (64%), Positives = 181/226 (80%), Gaps = 3/226 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RLGVN TW+SRW+A EYG LLHED+KIR Y+ LKQA ++K++IER
Sbjct: 1 MGQKINPIGLRLGVNRTWDSRWYADSGEYGRLLHEDVKIRLYVIEELKQAAISKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CRI ++SARPGLIIGK+G DIEK+R+KLS MT++E L++ E+ KPEI++T+IAQSI
Sbjct: 61 HKKCRITIHSARPGLIIGKRGADIEKLRRKLSEMTDAETSLNIVEIRKPEIDSTIIAQSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
+DYGTA A+TAYG CG+KV+V + E+ + D A+E R VE D
Sbjct: 181 DVDYGTAEAKTAYGICGVKVWVF-KGEILEHDPM--ASERRAVEGD 223
>gi|24981839|gb|AAN66090.1|AE016238_8 ribosomal protein S3 [Pseudomonas putida KT2440]
Length = 237
Score = 278 bits (710), Expect = 5e-73, Method: Composition-based stats.
Identities = 114/228 (50%), Positives = 154/228 (67%), Gaps = 4/228 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ S W+A G+ Y L +DLK REYLQ LK A V++I I R
Sbjct: 10 MGQKVHPTGIRLGIVKEHTSVWYADGATYADYLLKDLKTREYLQDKLKSASVSRIDIHRP 69
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ RI +++ARPG++IGKKG D+EK+R+ L+ +H+++ E+ KPE++A L+AQS+
Sbjct: 70 AQTARITIHTARPGIVIGKKGEDVEKLRQDLTKQMGVPVHINIEEIRKPELDAMLVAQSV 129
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV+FRRAMKRAVQ+AMR GA G+K+ SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 130 AQQLERRVMFRRAMKRAVQNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRVPLHTLRA 189
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS----DSTIPAAEHRVVE 224
IDY T A T YG G+KV++ + + PA + +
Sbjct: 190 DIDYNTYEAHTTYGVIGVKVWIFKGEVIGGRQEELKPQAPAPRKKAAK 237
>gi|299135251|ref|ZP_07028442.1| ribosomal protein S3 [Afipia sp. 1NLS2]
gi|298590228|gb|EFI50432.1| ribosomal protein S3 [Afipia sp. 1NLS2]
Length = 234
Score = 278 bits (710), Expect = 5e-73, Method: Composition-based stats.
Identities = 135/227 (59%), Positives = 176/227 (77%), Gaps = 4/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RLG+N TW+SRWFA EY LLHED++IRE L LKQA VA+I+IER
Sbjct: 1 MGQKINPIGLRLGINRTWDSRWFAGKGEYAKLLHEDVRIREVLMKELKQAAVARIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ VYSARPG++IGKKG DI+K++KK++ +T S++ +++ E+ KPE++ATL+A+SI
Sbjct: 61 HKKCRVSVYSARPGVVIGKKGADIDKLKKKVAEITQSDVVINIVEIRKPELDATLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAQGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYG A A T +G+CG+KV++ + E+ + D P A+ + + S
Sbjct: 181 DIDYGVATAFTTFGTCGVKVWLF-KGEILEHD---PMAQDKRLNDTS 223
>gi|240850829|ref|YP_002972229.1| 30S ribosomal protein S3 [Bartonella grahamii as4aup]
gi|240267952|gb|ACS51540.1| 30S ribosomal protein S3 [Bartonella grahamii as4aup]
Length = 236
Score = 278 bits (710), Expect = 5e-73, Method: Composition-based stats.
Identities = 148/226 (65%), Positives = 180/226 (79%), Gaps = 3/226 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RLGVN TW+SRW+A EYG LLHEDLKIR Y+ LKQA ++K++IER
Sbjct: 1 MGQKINPIGLRLGVNRTWDSRWYADSGEYGRLLHEDLKIRSYVLEELKQAAISKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CRI ++SARPGLIIGKKG DIEK+R+KLS MT++E L++ E+ KPEI+AT+IAQSI
Sbjct: 61 HKKCRITIHSARPGLIIGKKGADIEKLRRKLSEMTDAETSLNIVEIRKPEIDATIIAQSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLR+
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRS 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
+DYGTA A+TAYG CGIKV+V + E+ + D A+E R E D
Sbjct: 181 DVDYGTAEAKTAYGICGIKVWVF-KGEILEHDPM--ASERRATEVD 223
>gi|329850213|ref|ZP_08265058.1| ribosomal protein S3 [Asticcacaulis biprosthecum C19]
gi|328840528|gb|EGF90099.1| ribosomal protein S3 [Asticcacaulis biprosthecum C19]
Length = 253
Score = 278 bits (710), Expect = 6e-73, Method: Composition-based stats.
Identities = 129/227 (56%), Positives = 172/227 (75%), Gaps = 4/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+N TW+SRWFA+ EY LLH+DL IR+ L+ L AGV++I+IER
Sbjct: 1 MGQKANPIGLRLGINRTWDSRWFAQRQEYAKLLHQDLLIRKVLKEKLNAAGVSRIIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CRI +Y+ARPG++IGKKG DI+K+RK +S +T+ E+ L++ EV KPE++A L+A+SI
Sbjct: 61 HKKCRITIYAARPGVVIGKKGADIDKLRKDVSVITDGEVFLNLVEVRKPEVDAQLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKR++QSAMR GA G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRSIQSAMRLGAKGIRMNLSGRLGGAEIARMEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
ID G A A T YG G+KV++ + EV + D P+A+ + +++
Sbjct: 181 DIDMGFAEALTTYGIIGVKVWIF-KGEVLEHD---PSAQDKRWAQEA 223
>gi|302382624|ref|YP_003818447.1| ribosomal protein S3 [Brevundimonas subvibrioides ATCC 15264]
gi|302193252|gb|ADL00824.1| ribosomal protein S3 [Brevundimonas subvibrioides ATCC 15264]
Length = 250
Score = 278 bits (710), Expect = 6e-73, Method: Composition-based stats.
Identities = 133/227 (58%), Positives = 170/227 (74%), Gaps = 4/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI FRLGVN TW+SRWFA G Y LLH+DL +R +L+ L AGV++I+IER
Sbjct: 1 MGQKINPIGFRLGVNRTWDSRWFADGPSYARLLHQDLALRTWLKERLNAAGVSRIIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +Y+ARPG++IGKKG DIEK+RK +S T E+HL++ EV KPE +A LIA++I
Sbjct: 61 HKKCRVTIYAARPGVVIGKKGADIEKLRKDISARTEGEVHLNIVEVRKPETDAQLIAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERR+ FRRAMKR++QSAMR GA GV++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRIAFRRAMKRSMQSAMRLGAKGVRINVSGRLGGAEIARMEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYG A+T YG G+KV+V + EV + D P A+ + ++
Sbjct: 181 DIDYGFIEAKTTYGIIGVKVWVF-KGEVLEHD---PMAQDKRWALEA 223
>gi|307946292|ref|ZP_07661627.1| ribosomal protein S3 [Roseibium sp. TrichSKD4]
gi|307769956|gb|EFO29182.1| ribosomal protein S3 [Roseibium sp. TrichSKD4]
Length = 242
Score = 277 bits (709), Expect = 7e-73, Method: Composition-based stats.
Identities = 136/227 (59%), Positives = 173/227 (76%), Gaps = 4/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+NPI RLG+N TW+SRWFA EYG LLHED +IRE+L LKQA V+KI+IER
Sbjct: 1 MGHKVNPIGMRLGINRTWDSRWFAPKGEYGGLLHEDFRIREFLMNELKQAAVSKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK R+ ++S RPG++IGKKG DIE++RKK++++T SE+H+++ EV KPE++ATL+A SI
Sbjct: 61 HKKARVTIHSGRPGVVIGKKGADIERLRKKIADITKSEVHINIVEVRKPEVDATLVAASI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKR+VQSAMR GA G+K+ GRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRSVQSAMRLGAQGIKITCGGRLGGAEIARIEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYG A A TAYG CG+KV++ + E+ + D P A R + S
Sbjct: 181 DIDYGVASAHTAYGVCGVKVWIF-KGEILEHD---PMASERRATQGS 223
>gi|170738697|ref|YP_001767352.1| ribosomal protein S3 [Methylobacterium sp. 4-46]
gi|168192971|gb|ACA14918.1| ribosomal protein S3 [Methylobacterium sp. 4-46]
Length = 252
Score = 277 bits (709), Expect = 7e-73, Method: Composition-based stats.
Identities = 132/226 (58%), Positives = 174/226 (76%), Gaps = 4/226 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N TW+SRW+A EY L+HED+ IR+ L LKQA V+KI+IER
Sbjct: 1 MGQKVNPIGLRLGINRTWDSRWYANKGEYARLMHEDVAIRQALMKQLKQAAVSKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
H+ CR+ ++S RPG++IGKKG DIEK+RK + MT +++ +++ EV KPEI+ATL+A SI
Sbjct: 61 HRKCRVTIHSGRPGVVIGKKGADIEKLRKLVGTMTKADVTINIIEVRKPEIDATLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARLEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
+DYGTA A T YG+CGIKV+V + E+ + D P A+ + +++
Sbjct: 181 DVDYGTATAFTTYGTCGIKVWVF-KGEILEHD---PMAQDKRAQEE 222
>gi|148545745|ref|YP_001265847.1| 30S ribosomal protein S3 [Pseudomonas putida F1]
gi|161378146|ref|NP_742626.2| 30S ribosomal protein S3 [Pseudomonas putida KT2440]
gi|167031506|ref|YP_001666737.1| 30S ribosomal protein S3 [Pseudomonas putida GB-1]
gi|170723900|ref|YP_001751588.1| 30S ribosomal protein S3 [Pseudomonas putida W619]
gi|325272013|ref|ZP_08138457.1| 30S ribosomal protein S3 [Pseudomonas sp. TJI-51]
gi|34098362|sp|Q88QM9|RS3_PSEPK RecName: Full=30S ribosomal protein S3
gi|172048429|sp|A5VXQ3|RS3_PSEP1 RecName: Full=30S ribosomal protein S3
gi|148509803|gb|ABQ76663.1| SSU ribosomal protein S3P [Pseudomonas putida F1]
gi|166857994|gb|ABY96401.1| ribosomal protein S3 [Pseudomonas putida GB-1]
gi|169761903|gb|ACA75219.1| ribosomal protein S3 [Pseudomonas putida W619]
gi|313496825|gb|ADR58191.1| RpsC [Pseudomonas putida BIRD-1]
gi|324102844|gb|EGC00247.1| 30S ribosomal protein S3 [Pseudomonas sp. TJI-51]
Length = 228
Score = 277 bits (709), Expect = 7e-73, Method: Composition-based stats.
Identities = 114/228 (50%), Positives = 154/228 (67%), Gaps = 4/228 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ S W+A G+ Y L +DLK REYLQ LK A V++I I R
Sbjct: 1 MGQKVHPTGIRLGIVKEHTSVWYADGATYADYLLKDLKTREYLQDKLKSASVSRIDIHRP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ RI +++ARPG++IGKKG D+EK+R+ L+ +H+++ E+ KPE++A L+AQS+
Sbjct: 61 AQTARITIHTARPGIVIGKKGEDVEKLRQDLTKQMGVPVHINIEEIRKPELDAMLVAQSV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV+FRRAMKRAVQ+AMR GA G+K+ SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS----DSTIPAAEHRVVE 224
IDY T A T YG G+KV++ + + PA + +
Sbjct: 181 DIDYNTYEAHTTYGVIGVKVWIFKGEVIGGRQEELKPQAPAPRKKAAK 228
>gi|302344350|ref|YP_003808879.1| ribosomal protein S3 [Desulfarculus baarsii DSM 2075]
gi|301640963|gb|ADK86285.1| ribosomal protein S3 [Desulfarculus baarsii DSM 2075]
Length = 219
Score = 277 bits (709), Expect = 7e-73, Method: Composition-based stats.
Identities = 114/218 (52%), Positives = 155/218 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI FRLGV TW+SRWFA +Y L+ ED +IR++L+ L AGV+ I IER
Sbjct: 1 MGQKVNPIGFRLGVIRTWDSRWFANKRDYAGLVFEDHQIRKFLKKKLFHAGVSHIEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I +++ARPG++IGKKG++IE ++K L + E+ L ++EV KPE++A L+A+S+
Sbjct: 61 ANKAKIRIHTARPGIVIGKKGSEIESVKKALEQLIKREVMLDIHEVRKPEVDAQLVAESV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR+ FRRAMKRAV +A++ GA G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 ASQLERRIAFRRAMKRAVTTALKLGAQGIRIQCSGRLGGAEMARREWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
IDYG A A T YG G+KV + + + D D T A
Sbjct: 181 DIDYGFAEARTTYGVIGVKVLIFKGEVLDDRDKTQAQA 218
>gi|319405892|emb|CBI79524.1| 30S ribosomal protein S3 [Bartonella sp. AR 15-3]
Length = 236
Score = 277 bits (709), Expect = 8e-73, Method: Composition-based stats.
Identities = 147/226 (65%), Positives = 180/226 (79%), Gaps = 3/226 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RLG+N TW+SRW+A EYG LLHED+KIR Y+ LKQA V+K++IER
Sbjct: 1 MGQKINPIGLRLGINRTWDSRWYADSGEYGRLLHEDVKIRLYIIEELKQAAVSKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CRI V+SARPGLIIGK+G DIEK+R+KLS MT++E L++ E+ KPEI+AT+IAQSI
Sbjct: 61 HKKCRITVHSARPGLIIGKRGADIEKLRRKLSEMTDAETSLNIVEIRKPEIDATIIAQSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
+DYGTA A+TAYG CG+KV+V + E+ + D A+E R E D
Sbjct: 181 DVDYGTAEAKTAYGICGVKVWVF-KGEILEHDPM--ASERRATEGD 223
>gi|163739444|ref|ZP_02146854.1| 30S ribosomal protein S3 [Phaeobacter gallaeciensis BS107]
gi|163740238|ref|ZP_02147632.1| 30S ribosomal protein S3 [Phaeobacter gallaeciensis 2.10]
gi|161386096|gb|EDQ10471.1| 30S ribosomal protein S3 [Phaeobacter gallaeciensis 2.10]
gi|161387197|gb|EDQ11556.1| 30S ribosomal protein S3 [Phaeobacter gallaeciensis BS107]
Length = 235
Score = 277 bits (709), Expect = 8e-73, Method: Composition-based stats.
Identities = 128/225 (56%), Positives = 172/225 (76%), Gaps = 4/225 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+NP+ RL VN TW+SRW+A +YG LL EDL+IR++++ KQAG+A+++IER
Sbjct: 1 MGHKVNPVGMRLQVNRTWDSRWYADTKDYGDLLLEDLRIRDFIKEECKQAGIARVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +++ARPG+IIGKKG DIE +RKKL++MT+SE+HL++ EV KPE++A L+ +SI
Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIEVLRKKLASMTDSELHLNIVEVRKPELDAQLVGESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVSFRRAMKRAVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY + A T YG GIK ++ + E+ + D P A R ++
Sbjct: 181 DIDYAHSEAMTPYGIIGIKTWIF-KGEIMEHD---PQARDRKAQE 221
>gi|260577175|ref|ZP_05845152.1| ribosomal protein S3 [Rhodobacter sp. SW2]
gi|259020649|gb|EEW23968.1| ribosomal protein S3 [Rhodobacter sp. SW2]
Length = 236
Score = 277 bits (709), Expect = 8e-73, Method: Composition-based stats.
Identities = 130/227 (57%), Positives = 168/227 (74%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RL VN TW+SRWFA +YG LL EDLK+R ++ KQAGV+K++IER
Sbjct: 1 MGQKVNPIGMRLQVNRTWDSRWFAESKDYGNLLLEDLKMRAFIHEECKQAGVSKVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +++ARPG+IIGKKG DIE +RKKL+ T SE+HL++ EV KPE++A L+A+SI
Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIETLRKKLTVFTKSELHLNIVEVRKPELDAQLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLERRV FRRAMKRAVQ+AMR GA G++V SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 TQQLERRVSFRRAMKRAVQNAMRIGALGIRVNVSGRLGGAEIARVEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDY + A TAYG G+KV++ + E+ + D H ++ +
Sbjct: 181 DIDYALSEAMTAYGIIGVKVWIF-KGEILEHDPQAHDRRHAEAQEGA 226
>gi|114327224|ref|YP_744381.1| 30S ribosomal protein S3 [Granulibacter bethesdensis CGDNIH1]
gi|122327797|sp|Q0BUP4|RS3_GRABC RecName: Full=30S ribosomal protein S3
gi|114315398|gb|ABI61458.1| SSU ribosomal protein S3P [Granulibacter bethesdensis CGDNIH1]
Length = 225
Score = 277 bits (709), Expect = 8e-73, Method: Composition-based stats.
Identities = 124/227 (54%), Positives = 170/227 (74%), Gaps = 5/227 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+NPI RLG+N TW+SRW+A G +Y LLH+DLK+R +L+ L AGV++++IER
Sbjct: 1 MGHKVNPIGLRLGINRTWDSRWYAGG-DYSRLLHDDLKLRGHLRKKLSGAGVSRVVIERP 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ +Y+ARPG++IGKKG DIE +RK L+ M +++ L++ E+ KPEI+ATL+A++I
Sbjct: 60 AKKPRVTIYAARPGVVIGKKGQDIEALRKGLTGMAGTDVALNIVEIRKPEIDATLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 120 AQQLERRVAFRRAMKRAVQSAMRLGAQGIRINCSGRLGGAEIARIEWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYG A A+T YG+CG+KV++ + ++ P A+ R + +
Sbjct: 180 DIDYGVATAKTTYGTCGVKVWIFKGEILAQD----PMAQDRRAAEQA 222
>gi|114771263|ref|ZP_01448683.1| 30S ribosomal protein S3 [alpha proteobacterium HTCC2255]
gi|114548188|gb|EAU51075.1| 30S ribosomal protein S3 [alpha proteobacterium HTCC2255]
Length = 239
Score = 277 bits (708), Expect = 9e-73, Method: Composition-based stats.
Identities = 136/225 (60%), Positives = 177/225 (78%), Gaps = 4/225 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI FRL VN TW+SRW+A G +YG+LL ED+KIRE+++ QAGVA++++ER
Sbjct: 1 MGQKINPIGFRLQVNRTWDSRWYAEGDKYGSLLLEDIKIREFVKKECVQAGVARVIVERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ ++SARPG+IIGKKG DIE +RKKL+ T+SE+HL++ EV KPE++A L+A+S+
Sbjct: 61 HKKCRVTIHSARPGVIIGKKGADIETLRKKLAAFTDSELHLNIVEVRKPEMDAQLVAESV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQ+AMR GA G+++ +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVSFRRAMKRAVQNAMRMGALGIRINVAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY A TAYG GIKV++ + E+ + D PAA R +E+
Sbjct: 181 DIDYARAEGMTAYGIIGIKVWIF-KGEIMEHD---PAARDRRIEE 221
>gi|167629473|ref|YP_001679972.1| 30S ribosomal protein s3 [Heliobacterium modesticaldum Ice1]
gi|167592213|gb|ABZ83961.1| 30S ribosomal protein s3 [Heliobacterium modesticaldum Ice1]
Length = 251
Score = 277 bits (708), Expect = 9e-73, Method: Composition-based stats.
Identities = 101/220 (45%), Positives = 154/220 (70%), Gaps = 1/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+G+ W++RWFA G Y LLHEDLKIR++++ L AG+ +I IER
Sbjct: 1 MGQKVNPKGLRIGIIKDWDARWFA-GKNYAELLHEDLKIRKFVKSKLYAAGIPRIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ +++A+PG++IG+ G ++E +RK+L MT +++++ EV KPE++A L+A+++
Sbjct: 60 ANRVKVTIHTAKPGIVIGRGGAEVENLRKELEKMTGRAVNINIAEVKKPELDAQLVAENV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+R FRRAMK++V MR GA+G+K++ SGRL GAE++RTE Y EG+VPL TLRA
Sbjct: 120 AAQLEKRTSFRRAMKQSVGRTMRLGAEGIKIMVSGRLGGAEIARTEWYNEGKVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
IDYG A A T YG G+KV++ + + + + +
Sbjct: 180 DIDYGFAEARTTYGIIGVKVWIYKGEILPGAKNRTGESRE 219
>gi|16125503|ref|NP_420067.1| 30S ribosomal protein S3 [Caulobacter crescentus CB15]
gi|221234249|ref|YP_002516685.1| 30S ribosomal protein S3 [Caulobacter crescentus NA1000]
gi|27734530|sp|Q9A8U7|RS3_CAUCR RecName: Full=30S ribosomal protein S3
gi|254764520|sp|B8H4E0|RS3_CAUCN RecName: Full=30S ribosomal protein S3
gi|13422585|gb|AAK23235.1| ribosomal protein S3 [Caulobacter crescentus CB15]
gi|220963421|gb|ACL94777.1| SSU ribosomal protein S3P [Caulobacter crescentus NA1000]
Length = 250
Score = 277 bits (708), Expect = 9e-73, Method: Composition-based stats.
Identities = 128/226 (56%), Positives = 172/226 (76%), Gaps = 3/226 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ RLG+N TW+SRWFA G++YG LLH+DL +R L+ L QAGV++I+IER
Sbjct: 1 MGQKVNPVGLRLGINRTWDSRWFADGNQYGKLLHQDLAVRAALKKRLYQAGVSRIIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +Y+ARPG+IIGKKG DI+K+RK LS MT E+HL++ E+ KPE +A L+A+SI
Sbjct: 61 HKKCRVTIYAARPGVIIGKKGADIDKLRKDLSIMTEGEVHLNIVEIRKPETDAQLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERR+ FRRAMKR++QSA+R GA G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRIAFRRAMKRSIQSAVRLGAKGIRINVSGRLGGAEIARMEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
ID+G A A+T YG G+K ++ + EV + D A + R+ +
Sbjct: 181 DIDFGFAEAKTTYGIIGVKTWIF-KGEVLEHDPM--ALDKRLATES 223
>gi|94498482|ref|ZP_01305038.1| 30S ribosomal protein S3 [Sphingomonas sp. SKA58]
gi|94422025|gb|EAT07070.1| 30S ribosomal protein S3 [Sphingomonas sp. SKA58]
Length = 231
Score = 277 bits (708), Expect = 1e-72, Method: Composition-based stats.
Identities = 127/215 (59%), Positives = 164/215 (76%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K NPI RL +N TW+SRWFA G +YG LL EDLKIR+Y+ L QA ++K++IER
Sbjct: 1 MGHKSNPIGLRLQINRTWDSRWFAEGQDYGRLLLEDLKIRQYIMKTLPQAAISKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K CR+ +Y+ARPG+IIGKKG DIEK+RKKL N+T+S++ L++ E+ KPE+++ L+AQ I
Sbjct: 61 AKLCRVSIYAARPGVIIGKKGADIEKLRKKLGNLTSSDVSLNIVEIRKPEVDSKLVAQGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV FRRAMKRAVQSA+R GA+G+K+ GRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 ADQLERRVAFRRAMKRAVQSALRLGAEGIKITCGGRLGGAEIARVEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
++DY A A TAYG CGIKV++ + E+ D
Sbjct: 181 NVDYAEATAHTAYGVCGIKVWIF-KGEILGHDPMA 214
>gi|163733819|ref|ZP_02141261.1| 30S ribosomal protein S3 [Roseobacter litoralis Och 149]
gi|161392930|gb|EDQ17257.1| 30S ribosomal protein S3 [Roseobacter litoralis Och 149]
Length = 235
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 129/225 (57%), Positives = 170/225 (75%), Gaps = 4/225 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+NPI RL VN TW+SRW+A +YG LL EDL IR++++ QAGVA+++IER
Sbjct: 1 MGNKVNPIGMRLQVNRTWDSRWYADTKDYGDLLLEDLAIRDFIKKECHQAGVARVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +++ARPG+IIGKKG DIE +R+K++ MT SE+HL++ EV KPE++A L+ +SI
Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIEGLRQKIAKMTASELHLNIVEVRKPELDAALVGESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVSFRRAMKRAVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY A+TAYG GIK ++ + E+ + D PAA R ++
Sbjct: 181 DIDYAHVEAKTAYGIIGIKTWIF-KGEIMEHD---PAARDRKAQE 221
>gi|304391459|ref|ZP_07373401.1| ribosomal protein S3 [Ahrensia sp. R2A130]
gi|303295688|gb|EFL90046.1| ribosomal protein S3 [Ahrensia sp. R2A130]
Length = 236
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 127/225 (56%), Positives = 173/225 (76%), Gaps = 1/225 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI FRLG+N TW+SRWFA +Y ++L ED+ IR Y++ LK A ++K++IER
Sbjct: 1 MGQKINPIGFRLGINRTWDSRWFATKGDYASMLDEDINIRNYIEKELKAASISKVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +++ RPGLIIGKKG DIEK+++K+ MT++E+ +++ E+ KPE++AT++AQSI
Sbjct: 61 HKKCRVTIHAGRPGLIIGKKGADIEKLKRKVQTMTSAEVSVNIVEIRKPELDATIVAQSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKR+VQSA+R GA G+++ GRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRSVQSAIRLGAQGIRINCGGRLGGAEIARVEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDYGTA AETAYG CG+KV++ + E+ + D H ++
Sbjct: 181 DIDYGTAEAETAYGICGVKVWIF-KGEILEHDPMAHERRHTEAQE 224
>gi|110678727|ref|YP_681734.1| 30S ribosomal protein S3 [Roseobacter denitrificans OCh 114]
gi|123065752|sp|Q16AE5|RS3_ROSDO RecName: Full=30S ribosomal protein S3
gi|109454843|gb|ABG31048.1| ribosomal protein S3 [Roseobacter denitrificans OCh 114]
Length = 235
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 129/225 (57%), Positives = 169/225 (75%), Gaps = 4/225 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+NPI RL VN TW+SRW+A +YG LL EDL IR++++ QAGVA+++IER
Sbjct: 1 MGNKVNPIGMRLQVNRTWDSRWYADTKDYGDLLLEDLAIRDFIKKECHQAGVARVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +++ARPG+IIGKKG DIE +R+K++ MT SE+HL++ EV KPE++A L+ +SI
Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIEGLRQKIAKMTASELHLNIVEVRKPELDAALVGESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVSFRRAMKRAVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY A TAYG GIK ++ + E+ + D PAA R ++
Sbjct: 181 DIDYAHVEAATAYGIIGIKTWIF-KGEIMEHD---PAARDRKAQE 221
>gi|308047997|ref|YP_003911563.1| 30S ribosomal protein S3P [Ferrimonas balearica DSM 9799]
gi|307630187|gb|ADN74489.1| SSU ribosomal protein S3P [Ferrimonas balearica DSM 9799]
Length = 229
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 107/226 (47%), Positives = 153/226 (67%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ W+S W+A +Y L D ++R++L+ LK A V++I IER
Sbjct: 1 MGQKVHPNGIRLGITKPWSSTWYAEKKDYADNLFSDHEVRQFLKQELKNASVSRITIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R K++ + ++++EV KPE++A L+ S+
Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRLKVAKLAGVPAQINISEVRKPELDAQLVGDSV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+K+ SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKIEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDY T+ A T YG GIKV++ + + + + K
Sbjct: 181 DIDYATSEAHTTYGVIGIKVWIFKGEVLGGMPVVAEEPKAQPKRKG 226
>gi|39997943|ref|NP_953894.1| 30S ribosomal protein S3 [Geobacter sulfurreducens PCA]
gi|61215646|sp|Q748Z4|RS3_GEOSL RecName: Full=30S ribosomal protein S3
gi|39984888|gb|AAR36244.1| ribosomal protein S3 [Geobacter sulfurreducens PCA]
gi|298506882|gb|ADI85605.1| ribosomal protein S3 [Geobacter sulfurreducens KN400]
Length = 211
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 116/212 (54%), Positives = 161/212 (75%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ FRLGV TW+SRW+A ++Y LLHEDLK+R +L+ L +GV+KI IER
Sbjct: 1 MGQKVNPVGFRLGVIRTWDSRWYAE-ADYSKLLHEDLKLRNFLKKRLYNSGVSKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I +Y+ARPGLIIGKKG ++E ++K+L+ +T+ EI+L++ EV KPE++A L+A+++
Sbjct: 60 ANKAKINIYTARPGLIIGKKGAEVETLKKELAKLTDKEIYLNIQEVRKPELDAQLVAENV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV FRRAMK++V S+++FGA G+++ SGRL GAE+SRTE Y EGRVPL TLRA
Sbjct: 120 ALQLERRVAFRRAMKKSVTSSLKFGAKGIRITCSGRLGGAEMSRTEWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
IDYG A A+T YG G+KV + + +
Sbjct: 180 DIDYGFAEAKTTYGIIGVKVLIFKGEVLPGQK 211
>gi|104779761|ref|YP_606259.1| 30S ribosomal protein S3 [Pseudomonas entomophila L48]
gi|123381068|sp|Q1IFW0|RS3_PSEE4 RecName: Full=30S ribosomal protein S3
gi|95108748|emb|CAK13442.1| 30S ribosomal subunit protein S3 [Pseudomonas entomophila L48]
Length = 228
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 113/228 (49%), Positives = 154/228 (67%), Gaps = 4/228 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ S W+A G+ Y L +DL+ REYLQ LK A V++I I R
Sbjct: 1 MGQKVHPTGIRLGIVKEHTSVWYADGATYADYLLKDLQTREYLQDKLKSASVSRIDIHRP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ RI +++ARPG++IGKKG D+EK+R+ L+ +H+++ E+ KPE++A L+AQS+
Sbjct: 61 AQTARITIHTARPGIVIGKKGEDVEKLRQDLTKQMGVPVHINIEEIRKPELDAMLVAQSV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV+FRRAMKRAVQ+AMR GA G+K+ SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS----DSTIPAAEHRVVE 224
IDY T A T YG G+KV++ + + PA + +
Sbjct: 181 DIDYNTYEAHTTYGVIGVKVWIFKGEVIGGRQEELKPQAPAPRKKAAK 228
>gi|319408759|emb|CBI82416.1| 30S ribosomal protein S3 [Bartonella schoenbuchensis R1]
Length = 236
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 149/226 (65%), Positives = 182/226 (80%), Gaps = 3/226 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RLGVN TW+SRW+A EYG LLHEDLKIR Y+ LKQA ++K++IER
Sbjct: 1 MGQKINPIGLRLGVNRTWDSRWYADSGEYGRLLHEDLKIRLYVIEELKQAAISKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CRII++SARPGLIIGKKG DIEK+R KLS MTN+E L++ E+ KPEI+AT+IAQSI
Sbjct: 61 HKKCRIIIHSARPGLIIGKKGADIEKLRCKLSEMTNAETSLNIVEIRKPEIDATIIAQSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
+DYGTA A+TAYG CG+KV+V + E+ + + A+E+R +E D
Sbjct: 181 DVDYGTAEAKTAYGICGVKVWVF-KGEILEHNPM--ASENRAMESD 223
>gi|114570339|ref|YP_757019.1| 30S ribosomal protein S3P [Maricaulis maris MCS10]
gi|122315789|sp|Q0ANQ6|RS3_MARMM RecName: Full=30S ribosomal protein S3
gi|114340801|gb|ABI66081.1| SSU ribosomal protein S3P [Maricaulis maris MCS10]
Length = 234
Score = 276 bits (707), Expect = 1e-72, Method: Composition-based stats.
Identities = 135/226 (59%), Positives = 173/226 (76%), Gaps = 4/226 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLGVN TW SRW+A EY LLHED+KIR+ L+ LK A V+KI+IER
Sbjct: 1 MGQKVNPIGLRLGVNRTWESRWYAGAGEYAKLLHEDIKIRKMLKERLKNASVSKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ V++ARPG++IGKKG+DIE +RK+LS M + E+HL++ EV KPEI+A L+A+SI
Sbjct: 61 HKKCRVTVHTARPGVVIGKKGSDIETLRKELSKMIDGEVHLNLVEVRKPEIDAALVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKR++QSAMR GA G K++ GRL GAE++RTE Y EG VPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRSMQSAMRMGAKGCKIVCGGRLGGAEIARTEQYNEGSVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDYGT A+TA G GIKV++ + E+ + D P A+ R +++
Sbjct: 181 DIDYGTCEAKTAMGIIGIKVWIY-KGEIMEHD---PNAQERRLQES 222
>gi|115376080|ref|ZP_01463325.1| ribosomal protein S3 [Stigmatella aurantiaca DW4/3-1]
gi|310821000|ref|YP_003953358.1| 30S ribosomal protein S3 [Stigmatella aurantiaca DW4/3-1]
gi|115366895|gb|EAU65885.1| ribosomal protein S3 [Stigmatella aurantiaca DW4/3-1]
gi|309394072|gb|ADO71531.1| 30S ribosomal protein S3 [Stigmatella aurantiaca DW4/3-1]
Length = 220
Score = 276 bits (706), Expect = 1e-72, Method: Composition-based stats.
Identities = 111/221 (50%), Positives = 154/221 (69%), Gaps = 1/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI FRLGV TW+S+WF Y LHED++IRE+++ L AGV+K+ IER
Sbjct: 1 MGQKVHPIGFRLGVIKTWDSKWF-EHKNYAQWLHEDIRIREFVKKSLNHAGVSKVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ V++ARPG++IGK+G IE ++K L T +E+ L++ EV K E +A L+A++I
Sbjct: 60 ANKVKVNVHTARPGIVIGKRGAGIETVKKDLQQFTKNEVFLNIVEVRKAETDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR+ FRRAMK+A+Q+AM+FGA G++V SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 120 ATQLERRIAFRRAMKKALQTAMKFGAKGIRVACSGRLGGAEMARYEWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
IDYG A A+T YG G KV++ + + P +R
Sbjct: 180 DIDYGFAEAKTTYGKIGCKVWICRGEVLPGKGGQAPLPSNR 220
>gi|258512664|ref|YP_003186098.1| 30S ribosomal protein S3 [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257479390|gb|ACV59709.1| ribosomal protein S3 [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 226
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 105/226 (46%), Positives = 153/226 (67%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI R+G+ W ++W+A +Y LLHEDLKIR Y+ LK A + + IER
Sbjct: 1 MGQKVNPIGLRIGIIRDWEAKWYANKKDYQELLHEDLKIRNYVMQRLKDAAIGSVEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G +++ +R +L+ +T +H+S++E+ +P++ A L+A+SI
Sbjct: 61 ANRINVTIHTAKPGMVIGKGGQEVDALRNELNKLTGKRVHISISEIKQPDLCAKLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMK+A+Q +MR GA GV+V SGRL GAE++RTE Y+EG VPLQTLRA
Sbjct: 121 AQQLERRVAFRRAMKQAIQRSMRAGAKGVRVQVSGRLGGAEIARTEGYVEGTVPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDY A A T YG G+KV++ + + + A V+
Sbjct: 181 DIDYALAEAHTTYGRIGVKVWIYRGEVLPKRKNAQAEAASEAVQGG 226
>gi|83949789|ref|ZP_00958522.1| 30S ribosomal protein S3 [Roseovarius nubinhibens ISM]
gi|83837688|gb|EAP76984.1| 30S ribosomal protein S3 [Roseovarius nubinhibens ISM]
Length = 235
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 129/225 (57%), Positives = 171/225 (76%), Gaps = 4/225 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+NPI RL VN TW+SRW+A +YG LL ED+ IRE+++ KQAG+++++IER
Sbjct: 1 MGNKVNPIGMRLQVNRTWDSRWYANTKDYGNLLLEDIAIREFIEKECKQAGISRVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +++ARPG+IIGKKG DIE +RKKL+ MT+SE+HL++ EV KPE++A L+ SI
Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIETLRKKLAAMTDSELHLNIVEVRKPELDAALVGDSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVSFRRAMKRAVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY + A T YG GIKV++ + E+ + D P+A R ++
Sbjct: 181 DIDYAHSEAMTPYGIIGIKVWIF-KGEIMEHD---PSARDRKAQE 221
>gi|331005020|ref|ZP_08328427.1| SSU ribosomal protein S3p (S3e) [gamma proteobacterium IMCC1989]
gi|330421186|gb|EGG95445.1| SSU ribosomal protein S3p (S3e) [gamma proteobacterium IMCC1989]
Length = 228
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 105/224 (46%), Positives = 155/224 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ S W+A +EY LH DL +R+Y++ L A V+++ IER
Sbjct: 1 MGQKVHPTGIRLGIVKKHTSTWYANSNEYADKLHADLSVRKYIETKLASASVSRVDIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ +++ARPG++IGKKG D+EK+R ++S + +H+++ E+ KP+++A L+A+S+
Sbjct: 61 ANTAKVTIHTARPGIVIGKKGEDVEKLRNEVSKIMGVPVHINIEEIRKPDLDAKLVAESV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+K+ GRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRQGAQGIKIQVGGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
IDY TA A T YG G+KV++ + + D PA + + +
Sbjct: 181 DIDYSTAEAATTYGIIGVKVWIFKGEVIGDVVDAEPAPKKKNSK 224
>gi|49475788|ref|YP_033829.1| 30S ribosomal protein S3 [Bartonella henselae str. Houston-1]
gi|61215538|sp|Q6G2X1|RS3_BARHE RecName: Full=30S ribosomal protein S3
gi|49238595|emb|CAF27836.1| 30S ribosomal protein s3 [Bartonella henselae str. Houston-1]
Length = 236
Score = 276 bits (706), Expect = 2e-72, Method: Composition-based stats.
Identities = 145/225 (64%), Positives = 175/225 (77%), Gaps = 4/225 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RLGVN TW+SRW+A EYG LLHEDLKIR Y+ LKQA V+KI+IER
Sbjct: 1 MGQKINPIGLRLGVNRTWDSRWYADSGEYGRLLHEDLKIRLYVLEELKQAAVSKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +YSARPGLIIGKKG DIEK+R+KLS MTN+E L++ E+ KPEI+AT+IAQSI
Sbjct: 61 HKKCRVTIYSARPGLIIGKKGADIEKLRRKLSEMTNAETSLNIVEIHKPEIDATIIAQSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSA+R GA+G+++ SGRL GAE++R E Y EGRVPL TLR+
Sbjct: 121 AQQLERRVAFRRAMKRAVQSALRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRS 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
+DYGTA A+TAYG CG+KV+V + + P A R +
Sbjct: 181 DVDYGTAEAKTAYGICGVKVWVFKGEIL----EYDPMASERRAAE 221
>gi|188581381|ref|YP_001924826.1| ribosomal protein S3 [Methylobacterium populi BJ001]
gi|179344879|gb|ACB80291.1| ribosomal protein S3 [Methylobacterium populi BJ001]
Length = 248
Score = 276 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 133/224 (59%), Positives = 173/224 (77%), Gaps = 4/224 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RLG+N TW+SRWFA EY L+HED+ IR L LKQA V+KI+IER
Sbjct: 1 MGQKINPIGLRLGINRTWDSRWFAEKGEYAKLMHEDVAIRAALMKQLKQAAVSKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
H+ CR+ ++S RPG++IGKKG DIEK+RK + MT +++ +++ EV KPE++ATL+A+SI
Sbjct: 61 HRKCRVTIHSGRPGVVIGKKGADIEKLRKLVGTMTKADVTINIVEVRKPEVDATLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+++ +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
+DYGTA A T YG+CGIKV+V + E+ + D P A+ + +
Sbjct: 181 DVDYGTATAFTTYGTCGIKVWVF-KGEILEHD---PMAQDKKAQ 220
>gi|163745546|ref|ZP_02152906.1| 30S ribosomal protein S3 [Oceanibulbus indolifex HEL-45]
gi|161382364|gb|EDQ06773.1| 30S ribosomal protein S3 [Oceanibulbus indolifex HEL-45]
Length = 235
Score = 276 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 128/225 (56%), Positives = 169/225 (75%), Gaps = 4/225 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+NPI RL VN TW+SRW+A +YG LL EDL IR++++ QAGVA+++IER
Sbjct: 1 MGNKVNPIGMRLQVNRTWDSRWYADTKDYGDLLLEDLAIRDFIKKECHQAGVARVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +++ARPG+IIGKKG DIE +R+K++ MT SE+HL++ E+ KPE++A L+ +SI
Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIETLRQKIAKMTKSELHLNIVEIRKPELDAHLVGESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVSFRRAMKRAVQNAMRMGALGIRVNLAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY A TAYG GIK ++ + E+ + D PAA R ++
Sbjct: 181 DIDYAHVEAMTAYGIIGIKTWIF-KGEIMEHD---PAARDRKAQE 221
>gi|83854971|ref|ZP_00948501.1| 30S ribosomal protein S3 [Sulfitobacter sp. NAS-14.1]
gi|83941493|ref|ZP_00953955.1| 30S ribosomal protein S3 [Sulfitobacter sp. EE-36]
gi|83842814|gb|EAP81981.1| 30S ribosomal protein S3 [Sulfitobacter sp. NAS-14.1]
gi|83847313|gb|EAP85188.1| 30S ribosomal protein S3 [Sulfitobacter sp. EE-36]
Length = 235
Score = 276 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 126/225 (56%), Positives = 169/225 (75%), Gaps = 4/225 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+NPI RL VN TW+SRW+A +YG LL EDL IR++++ QAG+A+++IER
Sbjct: 1 MGNKVNPIGMRLQVNRTWDSRWYADTKDYGDLLLEDLAIRDFIKKECAQAGIARVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +++ARPG+IIGKKG DIE +R+K++ +T S++HL++ EV KPE++A L+ +SI
Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIEGLRQKIAKITKSDLHLNIVEVRKPELDAALVGESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVSFRRAMKRAVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY A TAYG GIK ++ + E+ + D PAA R ++
Sbjct: 181 DIDYAHVEASTAYGIIGIKTWIF-KGEIMEHD---PAARDRKAQE 221
>gi|103488289|ref|YP_617850.1| 30S ribosomal protein S3 [Sphingopyxis alaskensis RB2256]
gi|123379480|sp|Q1GPA5|RS3_SPHAL RecName: Full=30S ribosomal protein S3
gi|98978366|gb|ABF54517.1| SSU ribosomal protein S3P [Sphingopyxis alaskensis RB2256]
Length = 235
Score = 276 bits (705), Expect = 2e-72, Method: Composition-based stats.
Identities = 130/215 (60%), Positives = 165/215 (76%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RL VN TW+SRWFA G +YG +L EDLKIR+Y+ L QA ++K++IER
Sbjct: 1 MGQKSNPIGLRLQVNRTWDSRWFAEGEDYGRMLVEDLKIRQYVFKALPQAAISKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K CR+ +Y+ARPG+IIGKKG DIEK+RKKL MT S++ L++ E+ KPE++A L+AQ I
Sbjct: 61 AKLCRVSIYAARPGVIIGKKGADIEKLRKKLGEMTGSDVSLNIVEIRKPEVDAKLVAQGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV FRRAMKRAVQSAMR GA+G+++ +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 ADQLERRVAFRRAMKRAVQSAMRLGAEGIRINCAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
++DY A A TAYG CGIKV++ + E+ D
Sbjct: 181 NVDYAEAEAHTAYGVCGIKVWIF-KGEILGHDPMA 214
>gi|300309462|ref|YP_003773554.1| 30S ribosomal protein S3 [Herbaspirillum seropedicae SmR1]
gi|300072247|gb|ADJ61646.1| 30S ribosomal subunit S3 protein [Herbaspirillum seropedicae SmR1]
Length = 272
Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats.
Identities = 118/225 (52%), Positives = 162/225 (72%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V W SRW+A + + +L+EDLK+R YL+ LK A V +++IER
Sbjct: 1 MGQKIHPTGFRLAVTRNWGSRWYAGNNNFADMLNEDLKVRAYLKKKLKNASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI +YS+RPG++IGKKG DIE ++ L+ + +H+++ E+ KPE +A LIA SI
Sbjct: 61 AKNARITIYSSRPGVVIGKKGEDIEVLKSALAKLMGVPVHVNIEEIRKPEADAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 CQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDYG AET YG G+KV+V D +++ +S + E +K
Sbjct: 181 DIDYGFGEAETTYGIIGVKVWVYKGDRLANGESPVLVGEPEDDKK 225
>gi|296533993|ref|ZP_06896509.1| 30S ribosomal protein S3 [Roseomonas cervicalis ATCC 49957]
gi|296265659|gb|EFH11768.1| 30S ribosomal protein S3 [Roseomonas cervicalis ATCC 49957]
Length = 225
Score = 275 bits (704), Expect = 2e-72, Method: Composition-based stats.
Identities = 126/227 (55%), Positives = 169/227 (74%), Gaps = 5/227 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+NPI RLG+N TW+SRWFA +Y LLH+DLK+R+ L+ LK AGV+K++IER
Sbjct: 1 MGHKVNPIGLRLGINRTWDSRWFAGD-DYARLLHDDLKLRKTLKDRLKGAGVSKVIIERP 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ +++ARPG++IGKKG DIE +RK L+ + +E+ L++ E+ KPEI A L+A+SI
Sbjct: 60 AKKPRVTIHAARPGVVIGKKGADIEVLRKDLAKLAGAEVALNIVEIRKPEIEAQLVAESI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA G+++ GRL GAE++R E Y EGRVPL TLRA
Sbjct: 120 AQQLERRVAFRRAMKRAVQSAMRLGAGGIRINCGGRLGGAEIARMEWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYGTA A+T YG+CG+KV++ + E+ D P A+ + + +
Sbjct: 180 DIDYGTATAKTTYGTCGVKVWIF-KGEIMAHD---PLAQDKRAAEQA 222
>gi|153210013|ref|ZP_01947564.1| ribosomal protein S3 [Coxiella burnetii 'MSU Goat Q177']
gi|154706269|ref|YP_001425176.1| SSU ribosomal protein S3P [Coxiella burnetii Dugway 5J108-111]
gi|161830479|ref|YP_001596191.1| ribosomal protein S3 [Coxiella burnetii RSA 331]
gi|165924132|ref|ZP_02219964.1| ribosomal protein S3 [Coxiella burnetii RSA 334]
gi|212213244|ref|YP_002304180.1| SSU ribosomal protein S3P [Coxiella burnetii CbuG_Q212]
gi|212218080|ref|YP_002304867.1| SSU ribosomal protein S3P [Coxiella burnetii CbuK_Q154]
gi|189044972|sp|A9KD25|RS3_COXBN RecName: Full=30S ribosomal protein S3
gi|189044973|sp|A9NAN0|RS3_COXBR RecName: Full=30S ribosomal protein S3
gi|226697691|sp|B6J5D8|RS3_COXB1 RecName: Full=30S ribosomal protein S3
gi|226697692|sp|B6J257|RS3_COXB2 RecName: Full=30S ribosomal protein S3
gi|120575196|gb|EAX31820.1| ribosomal protein S3 [Coxiella burnetii 'MSU Goat Q177']
gi|154355555|gb|ABS77017.1| SSU ribosomal protein S3P [Coxiella burnetii Dugway 5J108-111]
gi|161762346|gb|ABX77988.1| ribosomal protein S3 [Coxiella burnetii RSA 331]
gi|165916414|gb|EDR35018.1| ribosomal protein S3 [Coxiella burnetii RSA 334]
gi|212011654|gb|ACJ19035.1| SSU ribosomal protein S3P [Coxiella burnetii CbuG_Q212]
gi|212012342|gb|ACJ19722.1| SSU ribosomal protein S3P [Coxiella burnetii CbuK_Q154]
Length = 227
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 114/225 (50%), Positives = 158/225 (70%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ R+G+ W S W+A ++ L+EDL +R+ LQ LK A V++I IER
Sbjct: 1 MGQKVNPVGMRIGITRDWTSNWYADKKDFADRLNEDLNVRQLLQKRLKGAAVSRIQIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+N +II++SARPG+IIGKKG +IE +R ++S + +H+++ EV KPE++A L+A++I
Sbjct: 61 ARNAKIIIHSARPGVIIGKKGGEIEALRDEISKVMKVPVHITIEEVRKPELDAKLVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV+FRRAMKRAVQ+ +R GA GVK+ SGRL GAE++RTE Y EGRVPL T RA
Sbjct: 121 AQQLERRVMFRRAMKRAVQNTLRQGALGVKISVSGRLGGAEIARTEWYREGRVPLHTFRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY TA A+T YG G+KV++ + + AA E+
Sbjct: 181 DIDYATASAKTTYGIIGVKVWIFKGEVHAPKPQAEEAAPQETEEE 225
>gi|29653596|ref|NP_819288.1| SSU ribosomal protein S3P [Coxiella burnetii RSA 493]
gi|30581016|sp|O85388|RS3_COXBU RecName: Full=30S ribosomal protein S3
gi|29540858|gb|AAO89802.1| SSU ribosomal protein S3P [Coxiella burnetii RSA 493]
Length = 227
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 113/225 (50%), Positives = 157/225 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ R+G+ W S W+A ++ L+EDL +R+ LQ LK A V++I IER
Sbjct: 1 MGQKVNPVGMRIGITRDWTSNWYADKKDFADRLNEDLNVRQLLQKRLKGAAVSRIQIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+N +II++SARPG+IIGKKG +IE +R ++ + +H+++ EV KPE++A L+A++I
Sbjct: 61 ARNAKIIIHSARPGVIIGKKGGEIEALRDEIFKVMKVPVHITIEEVRKPELDAKLVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV+FRRAMKRAVQ+ +R GA GVK+ SGRL GAE++RTE Y EGRVPL T RA
Sbjct: 121 AQQLERRVMFRRAMKRAVQNTLRQGALGVKISVSGRLGGAEIARTEWYREGRVPLHTFRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY TA A+T YG G+KV++ + + AA E+
Sbjct: 181 DIDYATASAKTTYGIIGVKVWIFKGEVHAPKPQAEEAAPQETEEE 225
>gi|162149168|ref|YP_001603629.1| 30S ribosomal protein S3 [Gluconacetobacter diazotrophicus PAl 5]
gi|209545088|ref|YP_002277317.1| 30S ribosomal protein S3 [Gluconacetobacter diazotrophicus PAl 5]
gi|189045011|sp|A9H3P5|RS3_GLUDA RecName: Full=30S ribosomal protein S3
gi|161787745|emb|CAP57341.1| 30S ribosomal protein S3 [Gluconacetobacter diazotrophicus PAl 5]
gi|209532765|gb|ACI52702.1| ribosomal protein S3 [Gluconacetobacter diazotrophicus PAl 5]
Length = 225
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 124/227 (54%), Positives = 171/227 (75%), Gaps = 5/227 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+NPI RLG+N TW+SRW+A G++Y LLH+DLK+R +L+ L AGV++++IER
Sbjct: 1 MGHKVNPIGLRLGINRTWDSRWYA-GADYSRLLHDDLKLRAHLRRKLSGAGVSRVVIERP 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ +Y+ARPG++IGKKG DI+ +RK L+ M +++ L++ E+ KPEI+ATL+A++I
Sbjct: 60 AKKPRVTIYAARPGVVIGKKGQDIDVLRKDLTRMAKTDVALNIVEIRKPEIDATLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA G+++ GRL GAE++R E Y EGRVPL TLRA
Sbjct: 120 AQQLERRVAFRRAMKRAVQSAMRLGAQGIRINCGGRLGGAEIARVEWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYG A A+T YG+CG+KV++ + E+ D P A+ R + +
Sbjct: 180 DIDYGVATAKTTYGTCGVKVWIF-KGEILAHD---PLAQDRRAAEQA 222
>gi|163851591|ref|YP_001639634.1| ribosomal protein S3 [Methylobacterium extorquens PA1]
gi|218530400|ref|YP_002421216.1| ribosomal protein S3 [Methylobacterium chloromethanicum CM4]
gi|240138759|ref|YP_002963231.1| 30S ribosomal subunit protein S3 [Methylobacterium extorquens AM1]
gi|254561359|ref|YP_003068454.1| 30S ribosomal subunit protein S3 [Methylobacterium extorquens DM4]
gi|163663196|gb|ABY30563.1| ribosomal protein S3 [Methylobacterium extorquens PA1]
gi|218522703|gb|ACK83288.1| ribosomal protein S3 [Methylobacterium chloromethanicum CM4]
gi|240008728|gb|ACS39954.1| 30S ribosomal subunit protein S3 [Methylobacterium extorquens AM1]
gi|254268637|emb|CAX24596.1| 30S ribosomal subunit protein S3 [Methylobacterium extorquens DM4]
Length = 248
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 134/224 (59%), Positives = 173/224 (77%), Gaps = 4/224 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RLG+N TW+SRWFA EY L+HED+ IR L LKQA V+KI+IER
Sbjct: 1 MGQKINPIGLRLGINRTWDSRWFAEKGEYAKLMHEDVAIRAALMKQLKQAAVSKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
H+ CR+ ++S RPG++IGKKG DIEK+RK + MT +++ +++ EV KPEI+ATL+A+SI
Sbjct: 61 HRKCRVTIHSGRPGVVIGKKGADIEKLRKLVGTMTKADVTINIVEVRKPEIDATLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+++ +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
+DYGTA A T YG+CGIKV+V + E+ + D P A+ + +
Sbjct: 181 DVDYGTATAFTTYGTCGIKVWVF-KGEILEHD---PMAQDKKAQ 220
>gi|254282595|ref|ZP_04957563.1| ribosomal protein S3 [gamma proteobacterium NOR51-B]
gi|219678798|gb|EED35147.1| ribosomal protein S3 [gamma proteobacterium NOR51-B]
Length = 224
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 108/224 (48%), Positives = 150/224 (66%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLGV NS W+A Y L DL++REY+ L A V++++IER
Sbjct: 1 MGQKVHPTGIRLGVVKDHNSVWYADSKNYAKNLISDLQVREYILKKLDAASVSRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
RI +++ARPG++IGKKG D+E +RK+LS +H+++ E+ KP+++A L+AQ++
Sbjct: 61 AATARITIHTARPGIVIGKKGEDVEALRKELSAKMGVPVHINIEEIRKPDLDARLVAQNV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV+FRRAMKR VQ+AMR GA+G+KV GRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVMFRRAMKRVVQNAMRQGAEGIKVQVGGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
IDY T AET YG G+KV++ + + D +
Sbjct: 181 DIDYSTYEAETTYGIIGVKVWIFKGEVIGGDDDAPDTSRRTAAN 224
>gi|56477600|ref|YP_159189.1| 30S ribosomal protein S3 [Aromatoleum aromaticum EbN1]
gi|81677438|sp|Q5P326|RS3_AZOSE RecName: Full=30S ribosomal protein S3
gi|56313643|emb|CAI08288.1| 30S ribosomal protein S3 [Aromatoleum aromaticum EbN1]
Length = 278
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 118/226 (52%), Positives = 163/226 (72%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V WNSRWFA +Y +LHEDLK+R++L+ L A V +++IER
Sbjct: 1 MGQKIHPTGFRLAVTRDWNSRWFASSGDYSRMLHEDLKVRDFLKKRLAHASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI ++SARPG++IGKKG DIE ++++L + +H+++ EV KPE++A LIA SI
Sbjct: 61 AKNARITLFSARPGVVIGKKGEDIELLKRELQKIMGVPVHVNIEEVRKPEVDAKLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+R++FRRAMKRA+Q+AMR GA G+K++++GRLNGAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDYG + A+T YG GIKV+V + + ++ +
Sbjct: 181 DIDYGVSEAKTTYGIIGIKVWVYKGEMLGRNERPAVVENENEARRG 226
>gi|163796913|ref|ZP_02190870.1| 30S ribosomal protein S3 [alpha proteobacterium BAL199]
gi|159177902|gb|EDP62451.1| 30S ribosomal protein S3 [alpha proteobacterium BAL199]
Length = 227
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 133/226 (58%), Positives = 173/226 (76%), Gaps = 5/226 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+NPI RLG+N TW+SRWFA Y ALLHEDL +R++LQ L+QAGV++I+IER
Sbjct: 1 MGHKVNPIGLRLGINRTWDSRWFA-SKGYAALLHEDLVLRKFLQKRLRQAGVSRIVIERP 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K RI +Y+ARPG+IIGKKG DIEK+R++LS MT +++ L++ E+ KPEI+A L+A++I
Sbjct: 60 AKRARITIYTARPGVIIGKKGADIEKLRQELSQMTRTDVALNIVEIRKPEIDAKLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA G+++ GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 120 AQQLERRVAFRRAMKRAVQSAMRLGAQGIRITCGGRLGGAEIARTEWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDYG A A T YG+CG+KV+V + E+ D P A+ + + +
Sbjct: 180 DIDYGDATAFTTYGTCGVKVWVF-KGEIMAHD---PMAQDKRLAEQ 221
>gi|108762029|ref|YP_631504.1| 30S ribosomal protein S3 [Myxococcus xanthus DK 1622]
gi|122981077|sp|Q1D769|RS3_MYXXD RecName: Full=30S ribosomal protein S3
gi|108465909|gb|ABF91094.1| ribosomal protein S3 [Myxococcus xanthus DK 1622]
Length = 220
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 112/221 (50%), Positives = 154/221 (69%), Gaps = 1/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI FRLGV TW+S+WF Y LHED++IRE+++ L AGV+K+ IER
Sbjct: 1 MGQKVHPIGFRLGVIKTWDSKWF-EHKNYAQWLHEDIRIREFVKKSLNHAGVSKVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ V++ARPG++IGK+G IE ++K L T +E+ L++ EV K E +A L+A++I
Sbjct: 60 ANKVKVNVHTARPGIVIGKRGAGIETVKKDLQQFTKNEVFLNIVEVRKAETDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR+ FRRAMK+A+Q+AM+FGA G++V SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 120 ATQLERRIAFRRAMKKALQTAMKFGAKGIRVACSGRLGGAEMARYEWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
IDYG A A+T YG G KV+V + + P +R
Sbjct: 180 DIDYGFAEAKTTYGKIGCKVWVCKGEVLPGKGGQAPMPSNR 220
>gi|126666807|ref|ZP_01737784.1| 30S ribosomal protein S3 [Marinobacter sp. ELB17]
gi|126628852|gb|EAZ99472.1| 30S ribosomal protein S3 [Marinobacter sp. ELB17]
Length = 227
Score = 275 bits (704), Expect = 3e-72, Method: Composition-based stats.
Identities = 109/213 (51%), Positives = 156/213 (73%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+NPI FRLGV NS W+A +Y L D+++RE+L L +A V+KI+IER
Sbjct: 1 MGHKVNPIGFRLGVIKEHNSVWYADKKDYAKNLLNDIQVREFLDKRLVKASVSKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+N RI +++ARPG++IGKKG D++++R+++S+M +H+++ EV KP+++A L+AQ++
Sbjct: 61 AQNARITIHTARPGIVIGKKGEDVDRLRREVSDMMGVPVHINIEEVRKPDLDARLVAQNV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+K+ GRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 AGQLERRVMFRRAMKRAVQNAMRQGAKGIKIQVGGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
IDYGT A T YG G+KV++ + + +
Sbjct: 181 DIDYGTYEAHTTYGVIGVKVWIFKGEILGGMEQ 213
>gi|307294980|ref|ZP_07574822.1| ribosomal protein S3 [Sphingobium chlorophenolicum L-1]
gi|306879454|gb|EFN10672.1| ribosomal protein S3 [Sphingobium chlorophenolicum L-1]
Length = 231
Score = 275 bits (703), Expect = 3e-72, Method: Composition-based stats.
Identities = 126/215 (58%), Positives = 166/215 (77%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K NPI RL +N TW+SRWFA G++YG LL EDLKIR+Y+ +L QA ++K++IER
Sbjct: 1 MGHKSNPIGLRLQINRTWDSRWFAEGADYGRLLLEDLKIRQYIMKNLPQAAISKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K CR+ +Y+ARPG+IIGKKG DIEK+RKKL ++T+S++ L++ E+ KPE+++ L+AQ I
Sbjct: 61 AKLCRVSIYAARPGVIIGKKGADIEKLRKKLGSLTSSDVSLNIVEIRKPEVDSKLVAQGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV FRRAMKRAVQSA+R GA+G+K+ GRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 ADQLERRVAFRRAMKRAVQSALRLGAEGIKITCGGRLGGAEIARVEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
++DY A A TAYG CGIKV++ + E+ D
Sbjct: 181 NVDYAEAEAHTAYGVCGIKVWIF-KGEILGHDPMA 214
>gi|170748642|ref|YP_001754902.1| ribosomal protein S3 [Methylobacterium radiotolerans JCM 2831]
gi|170655164|gb|ACB24219.1| ribosomal protein S3 [Methylobacterium radiotolerans JCM 2831]
Length = 248
Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 132/224 (58%), Positives = 171/224 (76%), Gaps = 4/224 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N TW+SRWFA +Y L+HED+ IR L LKQA V+KI+IER
Sbjct: 1 MGQKVNPIGLRLGINRTWDSRWFANKGDYAKLMHEDVAIRAALMKQLKQAAVSKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
H+ CR+ ++S RPG++IGKKG DIEK+RK + MT +++ +++ EV KPEI+ATL+A SI
Sbjct: 61 HRKCRVTIHSGRPGVVIGKKGADIEKLRKLVGTMTKADVTINIVEVRKPEIDATLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARQEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
+DYGTA A T YG+CGIKV+V + E+ + D P A+ + +
Sbjct: 181 DVDYGTATAFTTYGTCGIKVWVF-KGEILEHD---PMAQDKKAQ 220
>gi|56461018|ref|YP_156299.1| ribosomal protein S3 [Idiomarina loihiensis L2TR]
gi|61215389|sp|Q5QXY3|RS3_IDILO RecName: Full=30S ribosomal protein S3
gi|56180028|gb|AAV82750.1| Ribosomal protein S3 [Idiomarina loihiensis L2TR]
Length = 226
Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 108/226 (47%), Positives = 161/226 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG++ WN+ W+A +E+ LH D ++R++L L+ A V++I+I+R
Sbjct: 1 MGQKVHPNGIRLGISRPWNATWYANTNEFADNLHSDFQVRKFLNKELRNASVSRIVIDRP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK++S +T + ++++EV KPE+++ L+A +I
Sbjct: 61 AKSVRVTIHTARPGVVIGKKGEDVEKLRKQVSKLTGAPAQINISEVRKPELDSQLVADNI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+A+R GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AGQLERRVMFRRAMKRAVQNAIRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + + + A R +
Sbjct: 181 DIDYSTSEANTTYGIIGVKVWIFRGEVLGGLPTEEKPAPKRGKNRK 226
>gi|148260933|ref|YP_001235060.1| 30S ribosomal protein S3 [Acidiphilium cryptum JF-5]
gi|326404331|ref|YP_004284413.1| 30S ribosomal protein S3 [Acidiphilium multivorum AIU301]
gi|189044987|sp|A5FZV9|RS3_ACICJ RecName: Full=30S ribosomal protein S3
gi|146402614|gb|ABQ31141.1| SSU ribosomal protein S3P [Acidiphilium cryptum JF-5]
gi|325051193|dbj|BAJ81531.1| 30S ribosomal protein S3 [Acidiphilium multivorum AIU301]
Length = 225
Score = 275 bits (703), Expect = 4e-72, Method: Composition-based stats.
Identities = 128/227 (56%), Positives = 174/227 (76%), Gaps = 5/227 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+NP+ RLG+N TW+SRWFA G++Y +LLH+DLK+RE+L L AGV+K+LIER
Sbjct: 1 MGHKVNPVGLRLGINRTWDSRWFA-GADYASLLHDDLKLREHLLGRLSGAGVSKVLIERP 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ +Y+ARPG++IGKKG DIE ++K+LS+M +++ L++ E+ KPEI+A L+AQ+I
Sbjct: 60 AKKPRVTIYAARPGVVIGKKGQDIEVLKKELSSMAKADVSLNIVEIRKPEIDAALVAQNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 120 AQQLERRVAFRRAMKRAVQSAMRLGAQGIRINCSGRLGGAEIARMEWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
ID+G A A+T YG+CG+KV++ + E+ D P A+ R + +
Sbjct: 180 DIDFGVATAKTTYGTCGVKVWIF-KGEIMAHD---PMAQDRRAAEQA 222
>gi|53803417|ref|YP_114782.1| 30S ribosomal protein S3 [Methylococcus capsulatus str. Bath]
gi|61215439|sp|Q605B8|RS3_METCA RecName: Full=30S ribosomal protein S3
gi|53757178|gb|AAU91469.1| ribosomal protein S3 [Methylococcus capsulatus str. Bath]
Length = 223
Score = 274 bits (702), Expect = 4e-72, Method: Composition-based stats.
Identities = 106/210 (50%), Positives = 148/210 (70%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP RLG W+SRWFA Y L+ DLK+RE+L+ LK A V++I I R
Sbjct: 1 MGQKVNPTGIRLGYIKDWSSRWFADSKSYPVFLNNDLKVREFLKQKLKHASVSRIQINRL 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
N +I +++ARPG++IGK+G DI+ +R+ +S + +SV E+ KPE++A L+A+ +
Sbjct: 61 ANNAQITIHTARPGIVIGKRGEDIDALRRDVSRFMGVPVQVSVEEIRKPELDAQLVAEGV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+R++FRRAMKRAVQ+ +R GA+G+K+ +GRLNGAE++RTE Y EGRVPL T RA
Sbjct: 121 AQQLEKRIMFRRAMKRAVQNTLRVGAEGIKISVAGRLNGAEIARTEWYREGRVPLHTFRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210
IDYG A A T YG G+KV++ +
Sbjct: 181 DIDYGFAEAVTTYGVIGVKVWIFKGEVFEP 210
>gi|192362436|ref|YP_001981214.1| 30S ribosomal protein S3 [Cellvibrio japonicus Ueda107]
gi|190688601|gb|ACE86279.1| ribosomal protein S3 [Cellvibrio japonicus Ueda107]
Length = 226
Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats.
Identities = 107/210 (50%), Positives = 152/210 (72%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ S W+A G++Y L+ DLK+R Y+Q L A V+++ IER
Sbjct: 1 MGQKVHPNGIRLGIIKKHTSVWYADGTDYADKLNIDLKVRSYIQEKLASASVSRVDIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
RI +++ARPG++IGKKG D++K+R ++S +H+++ E+ KP+++A L+AQS+
Sbjct: 61 ANTARITIHTARPGIVIGKKGEDVDKLRAEISKQMGVPVHINIEEIRKPDLDAALVAQSV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV+FRRAMKRAVQ+AMR GA+G+K+ GRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRQGAEGIKIQVGGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210
IDY TA A T YG G+KV++ + + D
Sbjct: 181 DIDYATAEASTTYGIIGVKVWIFKGEVIGD 210
>gi|294010619|ref|YP_003544079.1| ribosomal protein S3 [Sphingobium japonicum UT26S]
gi|292673949|dbj|BAI95467.1| ribosomal protein S3 [Sphingobium japonicum UT26S]
Length = 231
Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats.
Identities = 126/215 (58%), Positives = 165/215 (76%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K NPI RL +N TW+SRWFA G++YG LL EDLKIR+++ +L QA ++K++IER
Sbjct: 1 MGHKSNPIGLRLQINRTWDSRWFAEGADYGRLLLEDLKIRQFIMKNLPQAAISKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K CR+ +Y+ARPG+IIGKKG DIEK+RKKL +T+S++ L++ E+ KPEI++ L+AQ I
Sbjct: 61 AKLCRVSIYAARPGVIIGKKGADIEKLRKKLGGLTSSDVSLNIVEIRKPEIDSKLVAQGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV FRRAMKRAVQSA+R GA+G+K+ GRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 ADQLERRVAFRRAMKRAVQSALRLGAEGIKITCGGRLGGAEIARVEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
++DY A A TAYG CGIKV++ + E+ D
Sbjct: 181 NVDYAEAEAHTAYGVCGIKVWIF-KGEILGHDPMA 214
>gi|71905967|ref|YP_283554.1| 30S ribosomal protein S3 [Dechloromonas aromatica RCB]
gi|91207650|sp|Q47J97|RS3_DECAR RecName: Full=30S ribosomal protein S3
gi|71845588|gb|AAZ45084.1| SSU ribosomal protein S3P [Dechloromonas aromatica RCB]
Length = 261
Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats.
Identities = 123/224 (54%), Positives = 163/224 (72%), Gaps = 2/224 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V W+SRW+A ++ +L+ED+K+REYL+ L A V ++LIER
Sbjct: 1 MGQKIHPTGFRLAVTKNWSSRWYANSKDFPGMLNEDIKVREYLKRKLAHASVGRVLIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN R+ VYSARPG++IGKKG DIE++R L + +H+S+ E+ KPEI+A LIA SI
Sbjct: 61 AKNARVTVYSARPGVVIGKKGEDIEQLRTDLQRIMGVPVHVSIEEIRKPEIDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+R++FRRAMKRA+Q+AMR GA G+KV+++GRLNGAE++R+E Y EGRVPL TLRA
Sbjct: 121 AQQLEKRIMFRRAMKRAMQNAMRLGAQGIKVMSAGRLNGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
IDY T+ A T YG GIKV+V D + + P AE +
Sbjct: 181 DIDYATSEALTTYGIIGIKVWVYKGDML--DRNEQPVAEEPAAD 222
>gi|90417575|ref|ZP_01225493.1| 30S ribosomal protein S3 [marine gamma proteobacterium HTCC2207]
gi|90330596|gb|EAS45892.1| 30S ribosomal protein S3 [marine gamma proteobacterium HTCC2207]
Length = 229
Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats.
Identities = 103/224 (45%), Positives = 152/224 (67%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ S W+A +Y LH+DL +RE+++ L A V+++ IER
Sbjct: 1 MGQKVHPTGIRLGIVKKHTSTWYAGNKDYADKLHQDLTVREFIRKRLAHASVSRVDIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ RI +++ARPG++IGKKG D+EK+R ++ N + +++ E+ KP+++A L+AQ++
Sbjct: 61 SDSARITIHTARPGIVIGKKGEDVEKLRNEIGNKMGCPVTINIEEIRKPDLDANLVAQNV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV+FRRAMKRAVQ+AMR GA GVK+ GRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRGGALGVKIQVGGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
IDY A T YG G+KV++ + + ++ A+ +
Sbjct: 181 DIDYAAAEGNTTYGIIGVKVWIFKGEVLGGEEAEKAPAKKQDTR 224
>gi|77462265|ref|YP_351769.1| 30S ribosomal protein S3 [Rhodobacter sphaeroides 2.4.1]
gi|126461141|ref|YP_001042255.1| 30S ribosomal protein S3 [Rhodobacter sphaeroides ATCC 17029]
gi|221638119|ref|YP_002524381.1| 30S ribosomal protein S3 [Rhodobacter sphaeroides KD131]
gi|91207837|sp|Q3J5R6|RS3_RHOS4 RecName: Full=30S ribosomal protein S3
gi|152060900|sp|A3PGL7|RS3_RHOS1 RecName: Full=30S ribosomal protein S3
gi|254764543|sp|B9KL97|RS3_RHOSK RecName: Full=30S ribosomal protein S3
gi|77386683|gb|ABA77868.1| SSU ribosomal protein S3P [Rhodobacter sphaeroides 2.4.1]
gi|126102805|gb|ABN75483.1| SSU ribosomal protein S3P [Rhodobacter sphaeroides ATCC 17029]
gi|221158900|gb|ACL99879.1| 30S ribosomal protein S3 [Rhodobacter sphaeroides KD131]
Length = 238
Score = 274 bits (702), Expect = 5e-72, Method: Composition-based stats.
Identities = 130/226 (57%), Positives = 170/226 (75%), Gaps = 1/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RL VN TW+SRWFA +YG LL EDLK+RE++ + KQAGV+K++IER
Sbjct: 1 MGQKVNPIGMRLQVNRTWDSRWFAESKDYGNLLLEDLKMREFIHDYAKQAGVSKVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
H+ CR+ +++ARPG+IIGKKG DIE +RKKLS T SE+HL++ E+ KPE++A L+A+SI
Sbjct: 61 HRKCRVTIHTARPGVIIGKKGADIETLRKKLSAFTKSELHLNIVEIRKPELDAQLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQ+ERRV FRRAMKR VQ+AMR GA G++V SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQMERRVSFRRAMKRGVQNAMRIGALGIRVNVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + E+ + D H ++
Sbjct: 181 DIDYATSEATTPYGIIGVKVWIF-KGEILEHDPQAHDRRHSEAQEG 225
>gi|240167709|ref|ZP_04746368.1| 30S ribosomal protein S3 [Mycobacterium kansasii ATCC 12478]
Length = 277
Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats.
Identities = 105/229 (45%), Positives = 148/229 (64%), Gaps = 5/229 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG+ W SRW+A +Y + ED+ IR L L++AG+A + IERT
Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYAEYVKEDVAIRRLLSSGLERAGIADVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++GT+ ++IR L +T ++ L++ EV PE A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTGKQVQLNILEVKNPESQAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR
Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST---IPAAEHRVVEK 225
A IDYG A+T +G G+KV++ D V +PA R +
Sbjct: 180 ADIDYGLYEAKTTFGRIGVKVWIYKGDIVGGKRELAAAVPAGPERPRRE 228
>gi|332187763|ref|ZP_08389497.1| ribosomal protein S3 [Sphingomonas sp. S17]
gi|332012113|gb|EGI54184.1| ribosomal protein S3 [Sphingomonas sp. S17]
Length = 236
Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats.
Identities = 130/225 (57%), Positives = 173/225 (76%), Gaps = 4/225 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RL +N TW+SRWFA G +YG LL EDLKIR+Y+ L QA ++K++IER
Sbjct: 1 MGQKSNPIGLRLQINRTWDSRWFAEGHDYGRLLLEDLKIRQYIMKTLPQAAISKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K CRI +++ARPG+IIGKKG DIEK+RKKL +MT+S++ L++ E+ KPEI+A L+AQ +
Sbjct: 61 AKLCRISIFAARPGVIIGKKGADIEKLRKKLGSMTSSDVSLNIVEIRKPEIDAKLVAQGV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR+ FRRAMKRAVQSA+R GA+G+++ GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 ADQLERRIAFRRAMKRAVQSALRLGAEGIRITCGGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
++DY A A TAYG CG+KV++ + E+ D P A+ R++ +
Sbjct: 181 NVDYAEAQAHTAYGVCGVKVWIF-KGEILGHD---PMAQDRLMME 221
>gi|147676661|ref|YP_001210876.1| 30S ribosomal protein S3 [Pelotomaculum thermopropionicum SI]
gi|189045026|sp|A5D5G1|RS3_PELTS RecName: Full=30S ribosomal protein S3
gi|146272758|dbj|BAF58507.1| ribosomal protein S3 [Pelotomaculum thermopropionicum SI]
Length = 231
Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats.
Identities = 96/220 (43%), Positives = 152/220 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+G+ W +W+A Y ALLHED+KIR++++ L AG+++I IER
Sbjct: 1 MGQKVNPKGLRIGIIRDWEGKWYADKRNYAALLHEDIKIRKFIKEKLFAAGISRIQIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ +++A+PG++IG+ G ++E +RK+L N+T ++ +++ E+ PE++A L+A+++
Sbjct: 61 ANRVKVSIHTAKPGIVIGRGGAEVENLRKQLENLTGKQVSVNIVEIKVPELDAQLVAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+R+ FRRAMK+ V +M+ GA G+KV GRL GAE++RTE Y EG+VPL TLRA
Sbjct: 121 AAQLEKRIAFRRAMKQVVSRSMKMGAKGIKVACGGRLAGAEIARTEWYSEGKVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
IDYG A A T YG G+KV++ + + ++ + A
Sbjct: 181 DIDYGFAEANTTYGKIGVKVWIYRGEVLPEAKTPAKTAAR 220
>gi|313903145|ref|ZP_07836539.1| SSU ribosomal protein S3P [Thermaerobacter subterraneus DSM 13965]
gi|313466647|gb|EFR62167.1| SSU ribosomal protein S3P [Thermaerobacter subterraneus DSM 13965]
Length = 226
Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats.
Identities = 104/220 (47%), Positives = 152/220 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +P FRLG+ W+SRW+AR E+ LL ED +IR Y++ L AG++++ IER
Sbjct: 1 MGQKTHPKGFRLGIIRDWDSRWYARRQEFVDLLLEDQRIRRYIKKRLYDAGISRVEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ +PG++IGK GT +E +R++L MT ++ ++V EV +PE++A L+A+SI
Sbjct: 61 ANRIRLTIHAGKPGMVIGKGGTGVESLRQELERMTGRQVAINVVEVKEPELDAQLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A Q++RRV +RRAMK+A+Q MR GA G K+ SGRL GAE+SR+E EG VPL TLRA
Sbjct: 121 AAQIQRRVAWRRAMKQALQRTMRAGAKGCKIRVSGRLGGAEISRSEWTAEGSVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
IDYG A A T YG G+KV+++ + + ++ AAE
Sbjct: 181 DIDYGQAEAFTTYGQIGVKVWINRGEVLPEAKRPAEAAEQ 220
>gi|117927521|ref|YP_872072.1| 30S ribosomal protein S3 [Acidothermus cellulolyticus 11B]
gi|152060838|sp|A0LRM6|RS3_ACIC1 RecName: Full=30S ribosomal protein S3
gi|117647984|gb|ABK52086.1| SSU ribosomal protein S3P [Acidothermus cellulolyticus 11B]
Length = 341
Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats.
Identities = 103/225 (45%), Positives = 154/225 (68%), Gaps = 1/225 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FRLG+ ++SRW+A Y + ED+ IR + +++AG++++ IERT
Sbjct: 1 MGQKVNPHGFRLGITTEFSSRWYAD-RMYRDYVKEDVAIRRMMTRGMERAGISRVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR L +TN ++ L++ EV PEI+A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRADLEKLTNKQVQLNILEVKNPEIDAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL +RV FRRAM++A+QSA++ GA GV+V +GRL GAE+SRTE Y EGRVPL TLRA
Sbjct: 120 AEQLSQRVSFRRAMRKALQSALKAGAKGVRVQVAGRLGGAEMSRTEFYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDYG A T +G G+KV++ D V+ D RV ++
Sbjct: 180 DIDYGFYEARTTFGRIGVKVWIYKGDVVAGRDHEAARVAARVQQR 224
>gi|220921905|ref|YP_002497206.1| ribosomal protein S3 [Methylobacterium nodulans ORS 2060]
gi|219946511|gb|ACL56903.1| ribosomal protein S3 [Methylobacterium nodulans ORS 2060]
Length = 251
Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats.
Identities = 132/223 (59%), Positives = 171/223 (76%), Gaps = 4/223 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N TW+SRW+A EY L+HED+ IR+ L LKQA V+KI+IER
Sbjct: 1 MGQKVNPIGLRLGINRTWDSRWYANKGEYARLMHEDVAIRQALMKQLKQAAVSKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
H+ CR+ ++S RPG++IGKKG DIEK+RK + MT +++ +++ EV KPEI+ATL+A SI
Sbjct: 61 HRKCRVTIHSGRPGVVIGKKGADIEKLRKLVGTMTKADVTINIVEVRKPEIDATLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARLEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223
+DYGTA A T YG+CGIKV+V + E+ + D P A+ +
Sbjct: 181 DVDYGTATAFTTYGTCGIKVWVF-KGEILEHD---PMAQDKRA 219
>gi|261211145|ref|ZP_05925434.1| SSU ribosomal protein S3p (S3e) [Vibrio sp. RC341]
gi|262401877|ref|ZP_06078442.1| SSU ribosomal protein S3p (S3e) [Vibrio sp. RC586]
gi|260839646|gb|EEX66257.1| SSU ribosomal protein S3p (S3e) [Vibrio sp. RC341]
gi|262351849|gb|EEZ00980.1| SSU ribosomal protein S3p (S3e) [Vibrio sp. RC586]
Length = 234
Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats.
Identities = 108/224 (48%), Positives = 153/224 (68%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WN+ WFA ++ L D K+R+YL L A +++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNATWFANTKDFADNLDGDFKVRQYLSKELANASLSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++ L+A SI
Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDGQLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
IDY T+ A T YG G+KV++ + + + AAE + +
Sbjct: 181 DIDYATSSAHTTYGVIGVKVWIFKGEILGGMPAATEAAEPKADK 224
>gi|146278562|ref|YP_001168721.1| 30S ribosomal protein S3 [Rhodobacter sphaeroides ATCC 17025]
gi|189045323|sp|A4WVK2|RS3_RHOS5 RecName: Full=30S ribosomal protein S3
gi|145556803|gb|ABP71416.1| SSU ribosomal protein S3P [Rhodobacter sphaeroides ATCC 17025]
Length = 238
Score = 274 bits (701), Expect = 6e-72, Method: Composition-based stats.
Identities = 128/226 (56%), Positives = 170/226 (75%), Gaps = 1/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RL VN TW+SRWFA +YG LL EDLK+RE++ + KQAGV+K++IER
Sbjct: 1 MGQKVNPIGMRLQVNRTWDSRWFAESKDYGNLLLEDLKMREFIHDYAKQAGVSKVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
H+ CR+ +++ARPG+IIGKKG DIE +RKKL+ T SE+HL++ E+ KPE++A L+A+SI
Sbjct: 61 HRKCRVTIHTARPGVIIGKKGADIETLRKKLAAFTKSELHLNIVEIRKPELDAQLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQ+ERRV FRRAMKR VQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQMERRVSFRRAMKRGVQNAMRIGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + E+ + D H ++
Sbjct: 181 DIDYATSEASTPYGIIGVKVWIF-KGEILEHDPQAHDRRHSEAQEG 225
>gi|218290000|ref|ZP_03494177.1| ribosomal protein S3 [Alicyclobacillus acidocaldarius LAA1]
gi|218239985|gb|EED07172.1| ribosomal protein S3 [Alicyclobacillus acidocaldarius LAA1]
Length = 226
Score = 274 bits (701), Expect = 7e-72, Method: Composition-based stats.
Identities = 105/226 (46%), Positives = 153/226 (67%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI R+G+ W ++W+A +Y LLHEDLKIR Y+ LK A + + IER
Sbjct: 1 MGQKVNPIGLRIGIIRDWEAKWYANKKDYQVLLHEDLKIRNYVMQRLKDAAIGSVEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G +++ +R +L+ +T +H+S++E+ +P++ A L+A+SI
Sbjct: 61 ANRINVTIHTAKPGMVIGKGGQEVDALRNELNKLTGKRVHISISEIKQPDLCAKLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMK+A+Q +MR GA GV+V SGRL GAE++RTE Y+EG VPLQTLRA
Sbjct: 121 AQQLERRVAFRRAMKQAIQRSMRAGAKGVRVQVSGRLGGAEIARTEGYVEGTVPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDY A A T YG G+KV++ + + + A V+
Sbjct: 181 DIDYALAEAHTTYGRIGVKVWIYRGEVLPKRKNVQAEAASEAVQGG 226
>gi|319944789|ref|ZP_08019053.1| 30S ribosomal protein S3 [Lautropia mirabilis ATCC 51599]
gi|319742038|gb|EFV94461.1| 30S ribosomal protein S3 [Lautropia mirabilis ATCC 51599]
Length = 282
Score = 274 bits (701), Expect = 7e-72, Method: Composition-based stats.
Identities = 116/225 (51%), Positives = 164/225 (72%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V+ W SRW+A ++ L EDL++RE+L+ LK A V ++LIER
Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYAGNKDFAGKLAEDLQVREFLKKRLKNASVGRVLIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI +YSARPG++IGKKG DIE+++ +L+ M +H+++ E+ KPE++A LIA SI
Sbjct: 61 AKNARITIYSARPGVVIGKKGEDIERLKVELTKMLGVPVHVNIEEIRKPEVDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLE+R++FRRAMKRA+Q+AMR GA G+K++++GRLNGAE++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
+DYGT+ A+T YG G+KV+V D + ++ + +
Sbjct: 181 DVDYGTSEAQTTYGIIGVKVWVYKGDTLGRGEAPETTEKEAAGNE 225
>gi|260427444|ref|ZP_05781423.1| ribosomal protein S3 [Citreicella sp. SE45]
gi|260421936|gb|EEX15187.1| ribosomal protein S3 [Citreicella sp. SE45]
Length = 236
Score = 274 bits (700), Expect = 7e-72, Method: Composition-based stats.
Identities = 131/225 (58%), Positives = 169/225 (75%), Gaps = 4/225 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K NPI RL VN TW+SRW+A +YG LL ED+ IR+++ KQAGVA+++IER
Sbjct: 1 MGNKTNPIGMRLQVNRTWDSRWYADTKDYGDLLLEDIAIRDFIHEECKQAGVARVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ ++SARPG+IIGKKG DIE +RKKL+ MT+SE+HL++ EV KPE++A L+ +SI
Sbjct: 61 HKKCRVTIHSARPGVIIGKKGADIEVLRKKLAKMTDSELHLNIVEVRKPELDARLVGESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVSFRRAMKRAVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY A T YG GIKV++ + E+ + D P+A R ++
Sbjct: 181 DIDYANVEATTPYGIIGIKVWIF-KGEIMEHD---PSARERKSQE 221
>gi|85713141|ref|ZP_01044173.1| Ribosomal protein S3 [Idiomarina baltica OS145]
gi|85693011|gb|EAQ30977.1| Ribosomal protein S3 [Idiomarina baltica OS145]
Length = 226
Score = 274 bits (700), Expect = 8e-72, Method: Composition-based stats.
Identities = 107/226 (47%), Positives = 160/226 (70%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG++ WN+ W+A +E+ LH D ++R++L L+ A V++I+IER
Sbjct: 1 MGQKVHPNGIRLGISRPWNATWYANTNEFADNLHSDHQVRKFLTKELRNASVSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R+++ +T + ++++EV KPE++A L+A +I
Sbjct: 61 AKSVRVTIHTARPGVVIGKKGEDVEKLRQQVQKLTGAPSQINISEVRKPELDAQLVADNI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
+ QLERRV+FRRAMKRAVQ+A+R GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 SGQLERRVMFRRAMKRAVQNAIRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + + + A R +
Sbjct: 181 DIDYATSEANTTYGIIGVKVWIFRGEVLGGLPTEEKPAPKRGKNRK 226
>gi|118579125|ref|YP_900375.1| 30S ribosomal protein S3 [Pelobacter propionicus DSM 2379]
gi|152060889|sp|A1ALU7|RS3_PELPD RecName: Full=30S ribosomal protein S3
gi|118501835|gb|ABK98317.1| SSU ribosomal protein S3P [Pelobacter propionicus DSM 2379]
Length = 210
Score = 274 bits (700), Expect = 8e-72, Method: Composition-based stats.
Identities = 118/211 (55%), Positives = 162/211 (76%), Gaps = 1/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI FRLGV +W+S+W+A ++Y LLHEDLKIR +L+ L +G++KI IER
Sbjct: 1 MGQKVNPIGFRLGVIKSWDSKWYAE-ADYAKLLHEDLKIRAFLKKRLYSSGISKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I +Y+ARPGLIIGKKG+++E I+K+LSN+T+ EI +++ EV KPE++A L+A+++
Sbjct: 60 ANKTKINIYTARPGLIIGKKGSEVETIKKELSNLTSKEIFINIIEVRKPELDAQLVAENV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR+ FRRAMK++V SA++FGA G+++ SGRL GAE+SRTE Y EGRVPL TLRA
Sbjct: 120 ALQLERRIAFRRAMKKSVTSALKFGAKGIRITCSGRLGGAEMSRTEWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYG A A+T YG GIKV + + +
Sbjct: 180 DIDYGCAEAKTTYGLIGIKVLIFKGEVLPGH 210
>gi|295688912|ref|YP_003592605.1| 30S ribosomal protein S3 [Caulobacter segnis ATCC 21756]
gi|295430815|gb|ADG09987.1| ribosomal protein S3 [Caulobacter segnis ATCC 21756]
Length = 250
Score = 274 bits (700), Expect = 9e-72, Method: Composition-based stats.
Identities = 128/226 (56%), Positives = 171/226 (75%), Gaps = 3/226 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ RLGVN TW+SRWFA G++YG +LH+DL +R L+ L QAGV++I+IER
Sbjct: 1 MGQKVNPVGLRLGVNRTWDSRWFADGAQYGKMLHQDLAVRAALKKRLYQAGVSRIIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CRI +Y+ARPG+IIGKKG DI+K+RK LS T E+HL++ E+ KPE +A L+A+SI
Sbjct: 61 HKKCRITIYAARPGVIIGKKGADIDKLRKDLSVQTEGEVHLNIVEIRKPETDAQLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERR+ FRRAMKR++QSA+R GA G+++ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRIAFRRAMKRSIQSAVRLGAKGIRINVSGRLGGAEIARMEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
ID+G A A+T YG G+K ++ + EV + D A + R+ +
Sbjct: 181 DIDFGFAEAKTTYGIIGVKTWIF-KGEVLEHDPM--ALDKRLATES 223
>gi|255263196|ref|ZP_05342538.1| ribosomal protein S3 [Thalassiobium sp. R2A62]
gi|255105531|gb|EET48205.1| ribosomal protein S3 [Thalassiobium sp. R2A62]
Length = 235
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 131/225 (58%), Positives = 171/225 (76%), Gaps = 4/225 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+NPI RL VN TW+SRW+A +YG LL EDL++RE+++ QAGV++++IER
Sbjct: 1 MGNKVNPIGMRLQVNRTWDSRWYADTKDYGDLLLEDLRMREFIKKECHQAGVSRVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ V++ARPG+IIGKKG DIE +RKKL+ MT+SE+HL++ EV KPE++A L+ +SI
Sbjct: 61 HKKCRVTVHTARPGVIIGKKGADIETLRKKLAAMTDSELHLNIVEVRKPELDAALVGESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVSFRRAMKRAVQNAMRMGALGIRVNLAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY A TAYG GIK ++ + E+ + D PAA R ++
Sbjct: 181 DIDYAHVEALTAYGIIGIKTWIF-KGEIMEHD---PAARDRRQQE 221
>gi|319796211|ref|YP_004157851.1| ribosomal protein s3 [Variovorax paradoxus EPS]
gi|315598674|gb|ADU39740.1| ribosomal protein S3 [Variovorax paradoxus EPS]
Length = 304
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 120/219 (54%), Positives = 163/219 (74%), Gaps = 2/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V W+SRW+A ++ +L ED+K+REYL+ LK A V++++IER
Sbjct: 1 MGQKIHPTGFRLAVTRNWSSRWYASDRDFAGMLAEDIKVREYLKKKLKNASVSRVMIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI +YSARPG++IGKKG DIE ++++L + +++ EV KPEI+A LIA SI
Sbjct: 61 AKNARITIYSARPGVVIGKKGEDIENLKRELGKQLGVPVAVNIEEVRKPEIDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++R E Y EGRVPL TLRA
Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRLGALGIKIMSSGRLNGIEIARCEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDYGT+ A+T YG G+KV+V D + +D +PA E
Sbjct: 181 DIDYGTSEAKTTYGVIGVKVWVYKGDTLGRND--LPAVE 217
>gi|15642585|ref|NP_232218.1| 30S ribosomal protein S3 [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121730407|ref|ZP_01682752.1| ribosomal protein S3 [Vibrio cholerae V52]
gi|147673134|ref|YP_001218084.1| 30S ribosomal protein S3 [Vibrio cholerae O395]
gi|153217580|ref|ZP_01951261.1| ribosomal protein S3 [Vibrio cholerae 1587]
gi|153827402|ref|ZP_01980069.1| ribosomal protein S3 [Vibrio cholerae MZO-2]
gi|227082707|ref|YP_002811258.1| ribosomal protein S3 [Vibrio cholerae M66-2]
gi|229507358|ref|ZP_04396863.1| SSU ribosomal protein S3p (S3e) [Vibrio cholerae BX 330286]
gi|229509719|ref|ZP_04399200.1| SSU ribosomal protein S3p (S3e) [Vibrio cholerae B33]
gi|229513513|ref|ZP_04402977.1| SSU ribosomal protein S3p (S3e) [Vibrio cholerae TMA 21]
gi|229516843|ref|ZP_04406289.1| SSU ribosomal protein S3p (S3e) [Vibrio cholerae RC9]
gi|229521656|ref|ZP_04411074.1| SSU ribosomal protein S3p (S3e) [Vibrio cholerae TM 11079-80]
gi|229524571|ref|ZP_04413976.1| SSU ribosomal protein S3p (S3e) [Vibrio cholerae bv. albensis
VL426]
gi|229527480|ref|ZP_04416872.1| SSU ribosomal protein S3p (S3e) [Vibrio cholerae 12129(1)]
gi|229606864|ref|YP_002877512.1| 30S ribosomal protein S3 [Vibrio cholerae MJ-1236]
gi|254292184|ref|ZP_04962954.1| ribosomal protein S3 [Vibrio cholerae AM-19226]
gi|254851130|ref|ZP_05240480.1| 30S ribosomal protein S3 [Vibrio cholerae MO10]
gi|255744441|ref|ZP_05418393.1| SSU ribosomal protein S3p (S3e) [Vibrio cholera CIRS 101]
gi|258622721|ref|ZP_05717739.1| 30S ribosomal protein S3 [Vibrio mimicus VM573]
gi|258625746|ref|ZP_05720625.1| 30S ribosomal protein S3 [Vibrio mimicus VM603]
gi|262166611|ref|ZP_06034348.1| SSU ribosomal protein S3p (S3e) [Vibrio mimicus VM223]
gi|262170473|ref|ZP_06038151.1| SSU ribosomal protein S3p (S3e) [Vibrio mimicus MB-451]
gi|297581432|ref|ZP_06943355.1| ribosomal protein S3 [Vibrio cholerae RC385]
gi|27734537|sp|Q9KNZ0|RS3_VIBCH RecName: Full=30S ribosomal protein S3
gi|189045346|sp|A5F543|RS3_VIBC3 RecName: Full=30S ribosomal protein S3
gi|254764556|sp|C3LRQ2|RS3_VIBCM RecName: Full=30S ribosomal protein S3
gi|9657177|gb|AAF95731.1| ribosomal protein S3 [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121627841|gb|EAX60437.1| ribosomal protein S3 [Vibrio cholerae V52]
gi|124113468|gb|EAY32288.1| ribosomal protein S3 [Vibrio cholerae 1587]
gi|146315017|gb|ABQ19556.1| ribosomal protein S3 [Vibrio cholerae O395]
gi|149738675|gb|EDM53017.1| ribosomal protein S3 [Vibrio cholerae MZO-2]
gi|150421913|gb|EDN13890.1| ribosomal protein S3 [Vibrio cholerae AM-19226]
gi|227010595|gb|ACP06807.1| ribosomal protein S3 [Vibrio cholerae M66-2]
gi|227014479|gb|ACP10689.1| ribosomal protein S3 [Vibrio cholerae O395]
gi|229335112|gb|EEO00597.1| SSU ribosomal protein S3p (S3e) [Vibrio cholerae 12129(1)]
gi|229338152|gb|EEO03169.1| SSU ribosomal protein S3p (S3e) [Vibrio cholerae bv. albensis
VL426]
gi|229341250|gb|EEO06254.1| SSU ribosomal protein S3p (S3e) [Vibrio cholerae TM 11079-80]
gi|229345906|gb|EEO10878.1| SSU ribosomal protein S3p (S3e) [Vibrio cholerae RC9]
gi|229349390|gb|EEO14346.1| SSU ribosomal protein S3p (S3e) [Vibrio cholerae TMA 21]
gi|229353193|gb|EEO18132.1| SSU ribosomal protein S3p (S3e) [Vibrio cholerae B33]
gi|229354863|gb|EEO19784.1| SSU ribosomal protein S3p (S3e) [Vibrio cholerae BX 330286]
gi|229369519|gb|ACQ59942.1| SSU ribosomal protein S3p (S3e) [Vibrio cholerae MJ-1236]
gi|254846835|gb|EET25249.1| 30S ribosomal protein S3 [Vibrio cholerae MO10]
gi|255737966|gb|EET93359.1| SSU ribosomal protein S3p (S3e) [Vibrio cholera CIRS 101]
gi|258581984|gb|EEW06854.1| 30S ribosomal protein S3 [Vibrio mimicus VM603]
gi|258584909|gb|EEW09640.1| 30S ribosomal protein S3 [Vibrio mimicus VM573]
gi|261891549|gb|EEY37535.1| SSU ribosomal protein S3p (S3e) [Vibrio mimicus MB-451]
gi|262026327|gb|EEY44995.1| SSU ribosomal protein S3p (S3e) [Vibrio mimicus VM223]
gi|297534270|gb|EFH73108.1| ribosomal protein S3 [Vibrio cholerae RC385]
gi|327485072|gb|AEA79479.1| SSU ribosomal protein S3p (S3e) [Vibrio cholerae LMA3894-4]
Length = 233
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 108/224 (48%), Positives = 153/224 (68%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WN+ WFA ++ L D K+R+YL L A +++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNATWFANTKDFADNLDGDFKVRQYLSKELANASLSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++ L+A SI
Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDGQLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
IDY T+ A T YG G+KV++ + + + AAE + +
Sbjct: 181 DIDYATSSAHTTYGVIGVKVWIFKGEILGGMPAATEAAEPKADK 224
>gi|56551418|ref|YP_162257.1| 30S ribosomal protein S3 [Zymomonas mobilis subsp. mobilis ZM4]
gi|241761066|ref|ZP_04759155.1| ribosomal protein S3 [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|260752968|ref|YP_003225861.1| 30S ribosomal protein S3 [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|61215381|sp|Q5NQ59|RS3_ZYMMO RecName: Full=30S ribosomal protein S3
gi|56542992|gb|AAV89146.1| ribosomal protein S3 [Zymomonas mobilis subsp. mobilis ZM4]
gi|241374685|gb|EER64146.1| ribosomal protein S3 [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|258552331|gb|ACV75277.1| ribosomal protein S3 [Zymomonas mobilis subsp. mobilis NCIMB 11163]
Length = 231
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 129/218 (59%), Positives = 163/218 (74%), Gaps = 1/218 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K NPI RL +N TW+SRWFA+G +YG LL ED+KIR+++ L QA ++K++IER
Sbjct: 1 MGHKSNPIGMRLQINRTWDSRWFAQGGDYGQLLLEDIKIRKFIMKTLPQAAISKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K CRI +Y+ARPG+IIGKKG DIEK+RKKL +MT S + L++ E+ KPEI+A L+AQ I
Sbjct: 61 AKLCRISIYAARPGVIIGKKGADIEKLRKKLDSMTESGVSLNIVEIRKPEIDAQLVAQGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV FRRAMKRAVQSA+R GA GV++ GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 ADQLERRVAFRRAMKRAVQSALRLGAQGVRITCGGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
++DY A A TAYG CGIKV++ + E+ D
Sbjct: 181 NVDYAEAEAHTAYGVCGIKVWIF-KGEIMAHDPLAQDR 217
>gi|317123091|ref|YP_004103094.1| 30S ribosomal protein S3P [Thermaerobacter marianensis DSM 12885]
gi|315593071|gb|ADU52367.1| SSU ribosomal protein S3P [Thermaerobacter marianensis DSM 12885]
Length = 226
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 104/220 (47%), Positives = 151/220 (68%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +P FRLG+ W+SRW+AR E+ LL ED +IR +++ L AG++++ IER
Sbjct: 1 MGQKTHPKGFRLGIIRDWDSRWYARRQEFVDLLLEDQRIRRHIKKRLYDAGISRVEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
RI +++ +PG++IGK GT +E +R+ L MT ++ ++V EV +PE++A L+A+SI
Sbjct: 61 ANRVRITIHAGKPGMVIGKGGTGVEALRQDLERMTGRQVAINVVEVKEPELDAQLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A Q+ERR+ +RRAMK+A+Q AMR GA G K+ SGRL GAE+SR+E EG VPL TLRA
Sbjct: 121 AAQIERRISWRRAMKQALQRAMRAGAKGCKIRVSGRLGGAEISRSEWTAEGSVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
IDYG A A T YG G+KV+++ + + ++ AE
Sbjct: 181 DIDYGQAEAFTTYGQIGVKVWINRGEVLPEAKREAAPAEQ 220
>gi|78221852|ref|YP_383599.1| 30S ribosomal protein S3 [Geobacter metallireducens GS-15]
gi|91207656|sp|Q39Y00|RS3_GEOMG RecName: Full=30S ribosomal protein S3
gi|78193107|gb|ABB30874.1| SSU ribosomal protein S3P [Geobacter metallireducens GS-15]
Length = 211
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 115/212 (54%), Positives = 161/212 (75%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI FRLGV TW+SRW+A ++Y LLHED+K+R +L+ L +GV+KI IER
Sbjct: 1 MGQKVNPIGFRLGVIRTWDSRWYAE-ADYAKLLHEDIKLRNFLKKRLFNSGVSKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I +++ARPGLIIGKKG ++E ++K+L+ +T+ EI+L++ EV KPE++A L+++++
Sbjct: 60 ASKAKINIFTARPGLIIGKKGAEVETLKKELAKLTDKEIYLNIQEVRKPELDAQLVSENV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV FRRAMK++V SA++FGA G+++ SGRL GAE+SRTE Y EGRVPL TLRA
Sbjct: 120 ALQLERRVAFRRAMKKSVTSALKFGAKGIRITCSGRLGGAEMSRTEWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
IDYG A A+T YG G+KV + + +
Sbjct: 180 DIDYGFAEAKTTYGIIGVKVLIFKGEVLPGQK 211
>gi|329898716|ref|ZP_08272450.1| SSU ribosomal protein S3p (S3e) [gamma proteobacterium IMCC3088]
gi|328920771|gb|EGG28227.1| SSU ribosomal protein S3p (S3e) [gamma proteobacterium IMCC3088]
Length = 224
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 107/224 (47%), Positives = 152/224 (67%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ NS W+A Y L DL++R+Y++ L A V++ILIER
Sbjct: 1 MGQKVHPTGIRLGIVKDHNSVWYADSKNYARQLITDLEVRQYIEKVLDNASVSRILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ RI + +ARPG++IGKKG D++K+RK LS +++++ E+ KP+++A L+AQ++
Sbjct: 61 AQTARITISTARPGIVIGKKGEDVDKLRKDLSARMGVPVNINIEEIRKPDLDAKLVAQNV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV+FRRAMKRAVQ+A+R GA+GVK+ SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVMFRRAMKRAVQNALRQGAEGVKIQVSGRLGGAEIARAEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
IDY T A T YG G+KV++ + + +S +
Sbjct: 181 DIDYATYEASTTYGIIGVKVWIFKGEVIGGQESAQDGGKKPAAN 224
>gi|126739684|ref|ZP_01755376.1| 30S ribosomal protein S3 [Roseobacter sp. SK209-2-6]
gi|126719330|gb|EBA16040.1| 30S ribosomal protein S3 [Roseobacter sp. SK209-2-6]
Length = 236
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 127/225 (56%), Positives = 171/225 (76%), Gaps = 4/225 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+NP+ RL VN TW+SRW+A ++G LL ED++IR++++ KQAGVA+++IER
Sbjct: 1 MGHKVNPVGMRLQVNRTWDSRWYADTKDFGDLLLEDIRIRDFIKTECKQAGVARVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +++ARPG+IIGKKG DIE +RKKL+ MT+SE+HL++ EV KPE++A L+ +SI
Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIEVLRKKLAAMTDSELHLNIVEVRKPELDAQLVGESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVSFRRAMKRAVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY + A T YG GIK ++ + E+ + D P A R ++
Sbjct: 181 DIDYAHSEAMTPYGIIGIKTWIF-KGEIMEHD---PQARDRKAQE 221
>gi|118616577|ref|YP_904909.1| 30S ribosomal protein S3 [Mycobacterium ulcerans Agy99]
gi|183981059|ref|YP_001849350.1| 30S ribosomal protein S3, RpsC [Mycobacterium marinum M]
gi|152060883|sp|A0PM69|RS3_MYCUA RecName: Full=30S ribosomal protein S3
gi|226697734|sp|B2HSN7|RS3_MYCMM RecName: Full=30S ribosomal protein S3
gi|118568687|gb|ABL03438.1| 30S ribosomal protein S3, RpsC [Mycobacterium ulcerans Agy99]
gi|183174385|gb|ACC39495.1| 30S ribosomal protein S3, RpsC [Mycobacterium marinum M]
Length = 275
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 105/229 (45%), Positives = 148/229 (64%), Gaps = 5/229 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG+ W SRW+A +Y + ED+ IR L L++AG+A + IERT
Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYADYVKEDVAIRRLLSSGLERAGIADVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++GT+ ++IR L +T ++ L++ EV PE A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTGKQVQLNILEVKNPESQAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR
Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST---IPAAEHRVVEK 225
A IDYG A+T +G G+KV++ D V +PA R +
Sbjct: 180 ADIDYGLYEAKTTFGRIGVKVWIYKGDIVGGKRELAAAVPAGADRPRRE 228
>gi|239817867|ref|YP_002946777.1| 30S ribosomal protein S3 [Variovorax paradoxus S110]
gi|239804444|gb|ACS21511.1| ribosomal protein S3 [Variovorax paradoxus S110]
Length = 308
Score = 273 bits (699), Expect = 1e-71, Method: Composition-based stats.
Identities = 120/226 (53%), Positives = 166/226 (73%), Gaps = 2/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V W+SRW+A ++ +L ED+K+REYL+ LK A V++++IER
Sbjct: 1 MGQKIHPTGFRLAVTRNWSSRWYASDRDFAGMLAEDIKVREYLKKKLKNASVSRVMIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI +YSARPG++IGKKG DIE ++++L + +++ EV KPEI+A LIA SI
Sbjct: 61 AKNARITIYSARPGVVIGKKGEDIENLKRELGKQLGVPVAVNIEEVRKPEIDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLE+R++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDYGT+ A+T YG G+KV+V D + +D +PA E + +
Sbjct: 181 DIDYGTSEAKTTYGVIGVKVWVYKGDTLGRND--LPAVETPRPDDE 224
>gi|171060663|ref|YP_001793012.1| 30S ribosomal protein S3 [Leptothrix cholodnii SP-6]
gi|226697726|sp|B1Y8I1|RS3_LEPCP RecName: Full=30S ribosomal protein S3
gi|170778108|gb|ACB36247.1| ribosomal protein S3 [Leptothrix cholodnii SP-6]
Length = 285
Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats.
Identities = 116/215 (53%), Positives = 163/215 (75%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V W+SRW+A + +L ED+++RE+L+ LK A V+++ IER
Sbjct: 1 MGQKIHPTGFRLPVTRNWSSRWYANNRNFAGMLAEDIEVREFLKKKLKNAAVSRVTIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI +YSARPG++IGKKG DIE ++ +L+ M + +++ EV KPE++A LIA+SI
Sbjct: 61 AKNARITIYSARPGVVIGKKGEDIENLKLELAKMLKVPVAVNIEEVRKPEVDAQLIAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLE+R++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDYGTA A+T YG G+KV+V D +++ D+ +
Sbjct: 181 DIDYGTAEAKTTYGVIGVKVWVYRGDRLANGDAPV 215
>gi|114766893|ref|ZP_01445815.1| 30S ribosomal protein S3 [Pelagibaca bermudensis HTCC2601]
gi|114540939|gb|EAU43999.1| 30S ribosomal protein S3 [Roseovarius sp. HTCC2601]
Length = 236
Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats.
Identities = 133/225 (59%), Positives = 170/225 (75%), Gaps = 4/225 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K NPI RL VN TW+SRW+A +YG LL ED+ IRE++ KQAGVA+++IER
Sbjct: 1 MGNKTNPIGMRLQVNRTWDSRWYADTKDYGDLLLEDIAIREFIHEECKQAGVARVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ V++ARPG+IIGKKG DIE +RKKL++MT+SE+HL++ EV KPE++A L+ +SI
Sbjct: 61 HKKCRVTVHTARPGVIIGKKGADIEVLRKKLASMTDSELHLNIVEVRKPELDARLVGESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVSFRRAMKRAVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY A T YG GIKV++ + E+ + D PAA R ++
Sbjct: 181 DIDYANVEATTPYGIIGIKVWIF-KGEIMEHD---PAARDRKSQE 221
>gi|91786173|ref|YP_547125.1| 30S ribosomal protein S3 [Polaromonas sp. JS666]
gi|123165524|sp|Q12GW5|RS3_POLSJ RecName: Full=30S ribosomal protein S3
gi|91695398|gb|ABE42227.1| SSU ribosomal protein S3P [Polaromonas sp. JS666]
Length = 301
Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats.
Identities = 120/226 (53%), Positives = 164/226 (72%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRL V+ W SRW+A ++ +L ED+K+REYL+ LK A V+++LIER
Sbjct: 1 MGQKINPTGFRLAVSRNWASRWYASNRDFAGMLAEDIKVREYLKAKLKNAAVSRVLIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI ++SARPG++IGKKG DIE ++K+LS + +++ EV KPEI+A LIA SI
Sbjct: 61 AKNARITIFSARPGVVIGKKGEDIENLKKELSRQLGVPVAVNIEEVRKPEIDAKLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++R E Y EGRVPL TLRA
Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRLGALGIKIMSSGRLNGIEIARCEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDYGT+ A+T YG G+KV+V D + +S + +++
Sbjct: 181 DIDYGTSEAKTTYGVIGVKVWVYKGDTLGRGESPGAKLDAAPSDEE 226
>gi|90020613|ref|YP_526440.1| 30S ribosomal protein S3 [Saccharophagus degradans 2-40]
gi|123396486|sp|Q21M51|RS3_SACD2 RecName: Full=30S ribosomal protein S3
gi|89950213|gb|ABD80228.1| SSU ribosomal protein S3P [Saccharophagus degradans 2-40]
Length = 224
Score = 273 bits (698), Expect = 1e-71, Method: Composition-based stats.
Identities = 107/224 (47%), Positives = 154/224 (68%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ S W+A +EY L++DL++R+Y+Q L A V++I IER
Sbjct: 1 MGQKVHPTGIRLGIVKKHTSTWYAGKAEYADKLNQDLQVRKYIQNALAHASVSRIDIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IGKKG D+EK+R +L+ +H+++ E+ KP+++A L AQS+
Sbjct: 61 ANTARVTIHTARPGIVIGKKGEDVEKLRTELTKQMGVPVHINIEEIRKPDLDAALAAQSV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV+FRRAMKR VQ+AMR GA+GVKV GRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVMFRRAMKRTVQNAMRQGAEGVKVQVGGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
IDY TA A T YG G+KV++ + + + + + +
Sbjct: 181 DIDYATAEASTTYGIIGVKVWIFKGEIIGGIEEVEANQKKKGSK 224
>gi|300114730|ref|YP_003761305.1| 30S ribosomal protein S3 [Nitrosococcus watsonii C-113]
gi|299540667|gb|ADJ28984.1| ribosomal protein S3 [Nitrosococcus watsonii C-113]
Length = 223
Score = 273 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 108/216 (50%), Positives = 154/216 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI RLG+ WNS+W+A ++ LL+ DL +R YL L A V+ I I+R
Sbjct: 1 MGQKVHPIGIRLGIVKDWNSKWYADSGQFSELLNNDLAVRSYLTKKLSHALVSNIQIDRP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+N RI +++ARPG++IGKKG DI +R+++S M +H+++ E+ KPE++ATL+A ++
Sbjct: 61 ARNARITIHTARPGIVIGKKGEDINNLRQEVSGMMGIPVHINIQEIRKPELDATLVAVNV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERR++FRRAMKRAV +AMR GA G+++ SGRLNGAE++R+E Y EGRVPL TLRA
Sbjct: 121 AQQLERRIMFRRAMKRAVTNAMRVGAQGIRIKVSGRLNGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
IDYG A A T YG G+KV++ + + +
Sbjct: 181 DIDYGFAEARTTYGILGVKVWIFKGEVFEQPEPQVA 216
>gi|77165781|ref|YP_344306.1| 30S ribosomal protein S3 [Nitrosococcus oceani ATCC 19707]
gi|254433894|ref|ZP_05047402.1| ribosomal protein S3 [Nitrosococcus oceani AFC27]
gi|91207823|sp|Q3J8S0|RS3_NITOC RecName: Full=30S ribosomal protein S3
gi|76884095|gb|ABA58776.1| SSU ribosomal protein S3P [Nitrosococcus oceani ATCC 19707]
gi|207090227|gb|EDZ67498.1| ribosomal protein S3 [Nitrosococcus oceani AFC27]
Length = 223
Score = 273 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 108/217 (49%), Positives = 154/217 (70%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS+W+A ++ LL+ DL +R YL L A V+ I I+R
Sbjct: 1 MGQKVHPTGIRLGIVKDWNSKWYADSGQFSELLNNDLAVRSYLAKKLSHALVSNIQIDRP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+N RI +++ARPG++IGKKG DI +R+++S M +H+++ E+ KPE++ATL+A ++
Sbjct: 61 ARNARITIHTARPGIVIGKKGEDINNLRQEVSRMMGIPVHINIQEIRKPELDATLVAANV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERR++FRRAMKRAV +AMR GA G+++ SGRLNGAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRIMFRRAMKRAVTNAMRVGAQGIRIKVSGRLNGAEIARNEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
IDYG A A+T YG G+KV++ + + + A
Sbjct: 181 DIDYGFAEAKTTYGILGVKVWIFKGEVFEQPEPQVAA 217
>gi|295401914|ref|ZP_06811877.1| ribosomal protein S3 [Geobacillus thermoglucosidasius C56-YS93]
gi|312109267|ref|YP_003987583.1| ribosomal protein S3 [Geobacillus sp. Y4.1MC1]
gi|294976044|gb|EFG51659.1| ribosomal protein S3 [Geobacillus thermoglucosidasius C56-YS93]
gi|311214368|gb|ADP72972.1| ribosomal protein S3 [Geobacillus sp. Y4.1MC1]
Length = 218
Score = 273 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 104/209 (49%), Positives = 152/209 (72%), Gaps = 1/209 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI R+G+ W+SRW+A +Y LLHEDLKIREY+ L+ A V++I IER
Sbjct: 1 MGQKVNPIGLRIGIIRDWDSRWYAE-KDYADLLHEDLKIREYINKRLQDAAVSRIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK G+++E +RK L+ +T +H+++ E+ KP+++A L+A++I
Sbjct: 60 ANRVNITIHTAKPGMVIGKGGSEVEALRKALTQLTGKRVHINIVEIKKPDLDAKLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRA K+A+Q AMR GA G+K + SGRL GA+++R+E Y EG VPL TLRA
Sbjct: 120 ARQLENRVSFRRAQKQAIQRAMRAGAKGIKTMVSGRLGGADIARSEHYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVS 209
IDY TA A+T YG G+KV++ + +
Sbjct: 180 DIDYATAEADTTYGKIGVKVWIYRGEVLP 208
>gi|189424416|ref|YP_001951593.1| 30S ribosomal protein S3 [Geobacter lovleyi SZ]
gi|226697717|sp|B3E7U1|RS3_GEOLS RecName: Full=30S ribosomal protein S3
gi|189420675|gb|ACD95073.1| ribosomal protein S3 [Geobacter lovleyi SZ]
Length = 210
Score = 273 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 112/211 (53%), Positives = 160/211 (75%), Gaps = 1/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI FRLGV TW+S+W+A +++ LHEDLKIR++L+ L AG++KI IER
Sbjct: 1 MGQKVNPIGFRLGVIKTWDSKWYAE-ADFAKNLHEDLKIRQFLKKRLYSAGISKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I +++ARPGLIIGKKG ++E ++K L+ +T+ E+ +++NEV KPE++A L+A+++
Sbjct: 60 ANKTKINIHAARPGLIIGKKGAEVELLKKDLAAITSKEVFININEVRKPELDAQLVAENV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR+ FRRAMK++V S+++FGA G+++ SGRL GAE+SRTE Y EGRVPL TLRA
Sbjct: 120 ALQLERRIAFRRAMKKSVTSSLKFGAKGIRITCSGRLGGAEMSRTEWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYG A A+T YG G+KV + + +
Sbjct: 180 DIDYGFAEAKTTYGIIGVKVLIFKGEVLPGQ 210
>gi|88812751|ref|ZP_01127997.1| ribosomal protein S3 [Nitrococcus mobilis Nb-231]
gi|88789989|gb|EAR21110.1| ribosomal protein S3 [Nitrococcus mobilis Nb-231]
Length = 224
Score = 273 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 109/224 (48%), Positives = 158/224 (70%), Gaps = 2/224 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K++P FRLG+ W S W+A + +G L+ DLK+R +++ L A ++KI IER
Sbjct: 1 MGHKVHPTGFRLGITEEWRSMWYADSANFGDYLNTDLKVRNFIKHKLAHASISKIKIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN I +Y+ARPG++IGKKG DIE +R +L+ M + +H+++ E+ KPE++A L+A+++
Sbjct: 61 AKNALITIYTARPGIVIGKKGADIEALRVRLARMMDIPVHVNIEEIRKPELDAQLVAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERR++FRRAMKRAV +AMR G G+++ SGRLNGAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRIMFRRAMKRAVGNAMRLGGQGIRIQVSGRLNGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
IDYG A A+T YG G+KV++ + + ++P + R
Sbjct: 181 DIDYGLAHAKTTYGVIGVKVWIFKGEIL--DTDSVPGSTARKAR 222
>gi|121608249|ref|YP_996056.1| 30S ribosomal protein S3 [Verminephrobacter eiseniae EF01-2]
gi|152060914|sp|A1WHD1|RS3_VEREI RecName: Full=30S ribosomal protein S3
gi|121552889|gb|ABM57038.1| SSU ribosomal protein S3P [Verminephrobacter eiseniae EF01-2]
Length = 294
Score = 273 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 123/226 (54%), Positives = 167/226 (73%), Gaps = 2/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V+ W SRW+A ++ +L ED+K+REYL+ LK A V++ILIER
Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYADNRDFAGMLAEDIKVREYLKTKLKNAAVSRILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI +YSARPG++IGKKG DIE ++K+L+ + +++ EV KPEI+A LIA SI
Sbjct: 61 AKNARITIYSARPGVVIGKKGEDIESLKKELAVRLGVPVAVNIEEVRKPEIDAKLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++R E Y EGRVPL TLRA
Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARCEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDYGT+ A+T YG G+KV+V D + +D +PA E +++
Sbjct: 181 DIDYGTSEAKTTYGVIGVKVWVYKGDTLGRND--LPAVETPRPDEE 224
>gi|88704370|ref|ZP_01102084.1| 30S ribosomal protein S3 [Congregibacter litoralis KT71]
gi|88701421|gb|EAQ98526.1| 30S ribosomal protein S3 [Congregibacter litoralis KT71]
Length = 222
Score = 273 bits (697), Expect = 2e-71, Method: Composition-based stats.
Identities = 103/213 (48%), Positives = 150/213 (70%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ S W+A Y L DL++R ++ L A V++++IER
Sbjct: 1 MGQKVHPTGIRLGIVKDHTSVWYADRKNYAKQLVTDLQVRSLIEKKLDNASVSRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ RI +++ARPG++IGKKG D++K+RK+L+ +H+++ E+ KP+++A L+AQ++
Sbjct: 61 AQTARITIHTARPGIVIGKKGEDVDKLRKQLTKEMGVPVHINIEEIRKPDLDARLVAQNV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV+FRRAMKR VQ+AMR GA+G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVMFRRAMKRVVQNAMRQGAEGIKVQVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
IDY T A T YG G+KV++ + + ++
Sbjct: 181 DIDYATYEAATTYGILGVKVWIFKGEVLGADEA 213
>gi|126728170|ref|ZP_01743986.1| 30S ribosomal protein S3 [Sagittula stellata E-37]
gi|126711135|gb|EBA10185.1| 30S ribosomal protein S3 [Sagittula stellata E-37]
Length = 240
Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats.
Identities = 130/225 (57%), Positives = 171/225 (76%), Gaps = 4/225 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K NPI RL +N TW+SRW+A +YG LL EDL+IR+++ KQAG+A+++IER
Sbjct: 1 MGNKTNPIGMRLQINRTWDSRWYADTKDYGDLLLEDLRIRDFIHTECKQAGIARVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +++ARPG+IIGKKG DIE +RKK++NMT+SE+HL++ EV KPE++ATL+ +SI
Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIEVLRKKIANMTDSELHLNIVEVRKPELDATLVGESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVSFRRAMKRAVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY A T YG GIKV++ + E+ + D P A R ++
Sbjct: 181 DIDYANIEATTPYGIIGIKVWIF-KGEIMEHD---PQARDRKSQE 221
>gi|134298099|ref|YP_001111595.1| 30S ribosomal protein S3 [Desulfotomaculum reducens MI-1]
gi|189044975|sp|A4J117|RS3_DESRM RecName: Full=30S ribosomal protein S3
gi|134050799|gb|ABO48770.1| SSU ribosomal protein S3P [Desulfotomaculum reducens MI-1]
Length = 221
Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats.
Identities = 101/216 (46%), Positives = 151/216 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+G+ W +WFA Y LL ED+KIREY++ L QAG+++I IER
Sbjct: 1 MGQKVNPKGLRVGIIKDWEGKWFADKRNYSNLLIEDVKIREYIKRKLYQAGISRIQIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ +++A+PG++IG+ G ++E +RK+L MT ++H+++ EV PE++A L+A++I
Sbjct: 61 ANRVKVSIHTAKPGIVIGRGGAEVEALRKELEKMTAKQVHVNIVEVKTPEVDAQLVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+R+ FRRAMK+ VQ ++R GA G+K+ SGRL GAE++RTE Y EG+VPL TLRA
Sbjct: 121 ASQLEKRIAFRRAMKQTVQRSLRMGAKGIKIACSGRLAGAEIARTEWYSEGKVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
IDYG A A T YG G+KV++ + + ++
Sbjct: 181 DIDYGFAEANTTYGKIGVKVWIYKGEVLPEAKKPAA 216
>gi|148554268|ref|YP_001261850.1| 30S ribosomal protein S3 [Sphingomonas wittichii RW1]
gi|189045373|sp|A5V5Z6|RS3_SPHWW RecName: Full=30S ribosomal protein S3
gi|148499458|gb|ABQ67712.1| SSU ribosomal protein S3P [Sphingomonas wittichii RW1]
Length = 231
Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats.
Identities = 124/218 (56%), Positives = 166/218 (76%), Gaps = 1/218 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RL +N TW+SRW+A G++YG LL EDLKIR+++ + QA ++K++IER
Sbjct: 1 MGQKSNPIGMRLQINRTWDSRWYADGADYGRLLLEDLKIRKHIMKAIPQAAISKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K CRI VY+ARPG+IIGKKG DIEK+R+ L MT+S++ L++ E+ KPEI++ L+AQ +
Sbjct: 61 AKLCRISVYAARPGVIIGKKGADIEKLRRALGKMTSSDVSLNIVEIRKPEIDSKLVAQGV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR+ FRRAMKRAVQSA+R GA+G+++ +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 ADQLERRIAFRRAMKRAVQSALRLGAEGIRITCAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
++DY A A TAYG CGIKV++ + E+ D
Sbjct: 181 NVDYAEAEAHTAYGVCGIKVWIF-KGEILGHDPLAQDR 217
>gi|124268621|ref|YP_001022625.1| 30S ribosomal protein S3 [Methylibium petroleiphilum PM1]
gi|152060875|sp|A2SLF1|RS3_METPP RecName: Full=30S ribosomal protein S3
gi|124261396|gb|ABM96390.1| SSU ribosomal protein S3P [Methylibium petroleiphilum PM1]
Length = 299
Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats.
Identities = 118/215 (54%), Positives = 162/215 (75%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P+ FRL V W+SRW+A + +L EDLK+REYL+ LK A V++ILIER
Sbjct: 1 MGQKIHPVGFRLPVTRNWSSRWYASNRNFATMLAEDLKVREYLKAKLKSAAVSRILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI +YSARPG++IGKKG DIE ++ +L+ + +++ EV KPEI+A LIA SI
Sbjct: 61 AKNARITIYSARPGVVIGKKGEDIENLKAELTRRLGVPVAVNIEEVRKPEIDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLE+R++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDYG + A+T YG G+KV+V D +++ ++ +
Sbjct: 181 DIDYGFSEAKTTYGIIGVKVWVYRGDRLANGEAPV 215
>gi|34499635|ref|NP_903850.1| 30S ribosomal protein S3 [Chromobacterium violaceum ATCC 12472]
gi|61215684|sp|Q7NQF8|RS3_CHRVO RecName: Full=30S ribosomal protein S3
gi|34105485|gb|AAQ61840.1| 30S ribosomal protein S3 [Chromobacterium violaceum ATCC 12472]
Length = 233
Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats.
Identities = 111/227 (48%), Positives = 161/227 (70%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL VN W+S+WFA + +L +D+++RE+L+ L A V ++ IER
Sbjct: 1 MGQKIHPTGFRLAVNKNWSSKWFASSQNFPEMLKQDIEVREFLKKRLGHASVGRVTIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ RI ++SARPG++IGKKG DIE ++++L +H+++ EV KPE++A +IA I
Sbjct: 61 AKSARITIHSARPGVVIGKKGEDIEVLKQELQKRLGVPVHVNIEEVRKPELDAQIIADGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV+FRRAMKRA+Q+AMR GA+G+K+++SGRLNG +++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLEKRVMFRRAMKRAMQNAMRLGAEGIKIMSSGRLNGIDIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
+DY T+ A+T YG GIKV+V + PAA + + K +
Sbjct: 181 DVDYATSEAKTTYGIIGIKVWVYKGELKPGQVQATPAAPEKKMRKGA 227
>gi|323703542|ref|ZP_08115188.1| ribosomal protein S3 [Desulfotomaculum nigrificans DSM 574]
gi|323531533|gb|EGB21426.1| ribosomal protein S3 [Desulfotomaculum nigrificans DSM 574]
Length = 221
Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats.
Identities = 102/216 (47%), Positives = 151/216 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+G+ W +WFA Y LL ED+KIRE+++ L QAG+AKI IER
Sbjct: 1 MGQKVNPKGLRIGIIKDWEGKWFADKRNYSNLLIEDVKIREFIKKKLYQAGIAKIQIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ +++A+PG++IG+ G ++E +RK+L MT ++++++ EV PEI+A L+A+++
Sbjct: 61 ANRVKVSIHTAKPGIVIGRGGAEVEALRKQLEKMTGKQVNVNIVEVKTPEIDAQLVAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+R+ FRRAMK+ VQ A+R GA G+K+ SGRL GAE++RTE Y EG+VPL TLRA
Sbjct: 121 AAQLEKRIAFRRAMKQTVQRALRLGAKGIKIACSGRLAGAEIARTEWYSEGKVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
IDYG A A T YG G+KV++ + + ++
Sbjct: 181 DIDYGFAEANTTYGKIGVKVWIYKGEVLPEAKKPAA 216
>gi|152978147|ref|YP_001343776.1| 30S ribosomal protein S3 [Actinobacillus succinogenes 130Z]
gi|189044986|sp|A6VLJ4|RS3_ACTSZ RecName: Full=30S ribosomal protein S3
gi|150839870|gb|ABR73841.1| ribosomal protein S3 [Actinobacillus succinogenes 130Z]
Length = 235
Score = 272 bits (696), Expect = 2e-71, Method: Composition-based stats.
Identities = 110/230 (47%), Positives = 151/230 (65%), Gaps = 6/230 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ W+S WFA ++ L D K+R++L L A V++I IER
Sbjct: 1 MGQKVHPHGIRLGIVKPWSSTWFANTQDFADNLDGDFKVRKFLNKELMNASVSRITIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRTAVAKIAGVPAQINIAEVKKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD------SDSTIPAAEHRVVE 224
IDY TA A T YG G+KV++ + + PAA +
Sbjct: 181 DIDYNTAEAHTTYGVIGVKVWIFKGEILGGMAAIAQQPEQQPAAPKKAPR 230
>gi|307823448|ref|ZP_07653677.1| ribosomal protein S3 [Methylobacter tundripaludum SV96]
gi|307735433|gb|EFO06281.1| ribosomal protein S3 [Methylobacter tundripaludum SV96]
Length = 223
Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats.
Identities = 106/223 (47%), Positives = 154/223 (69%), Gaps = 2/223 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNSRW+A +Y LH+DL +R+Y++ L A V++I I R
Sbjct: 1 MGQKVHPTGIRLGIVKDWNSRWYASSQDYSVFLHQDLTVRDYIKKKLAHASVSRIQINRP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
N I +++ARPG++IGKKG DIE +R+ +S + + L+V E+ KPE++A L+A+ +
Sbjct: 61 PNNAHITIHTARPGIVIGKKGEDIEALRQAVSKIMGIPVQLNVEEIRKPELDAQLVAEGV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+R+++RRAMKRAV + MR GA+G+K+ GRLNGAE++R+E Y EGRVPL TLRA
Sbjct: 121 AQQLEKRIMYRRAMKRAVTNTMRLGAEGIKINVGGRLNGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE--VSDSDSTIPAAEHR 221
IDY TA A T YG GIKV++ + + ++I + +
Sbjct: 181 DIDYATAEAHTTYGIIGIKVWIFKGEVFDMDAHIASINSESKK 223
>gi|68249379|ref|YP_248491.1| 30S ribosomal protein S3 [Haemophilus influenzae 86-028NP]
gi|145628326|ref|ZP_01784127.1| 30S ribosomal protein S3 [Haemophilus influenzae 22.1-21]
gi|145630528|ref|ZP_01786308.1| 30S ribosomal protein S3 [Haemophilus influenzae R3021]
gi|145632137|ref|ZP_01787872.1| 30S ribosomal protein S3 [Haemophilus influenzae 3655]
gi|145634806|ref|ZP_01790514.1| 30S ribosomal protein S3 [Haemophilus influenzae PittAA]
gi|145636660|ref|ZP_01792327.1| 30S ribosomal protein S3 [Haemophilus influenzae PittHH]
gi|145638417|ref|ZP_01794027.1| 30S ribosomal protein S3 [Haemophilus influenzae PittII]
gi|145640878|ref|ZP_01796460.1| 30S ribosomal protein S3 [Haemophilus influenzae R3021]
gi|148826572|ref|YP_001291325.1| 30S ribosomal protein S3 [Haemophilus influenzae PittEE]
gi|148827972|ref|YP_001292725.1| 30S ribosomal protein S3 [Haemophilus influenzae PittGG]
gi|229844650|ref|ZP_04464789.1| 30S ribosomal protein S3 [Haemophilus influenzae 6P18H1]
gi|229845833|ref|ZP_04465945.1| 30S ribosomal protein S3 [Haemophilus influenzae 7P49H1]
gi|319897723|ref|YP_004135920.1| 30S ribosomal subunit protein s3 [Haemophilus influenzae F3031]
gi|329122789|ref|ZP_08251361.1| 30S ribosomal protein S3 [Haemophilus aegyptius ATCC 11116]
gi|81336194|sp|Q4QMB6|RS3_HAEI8 RecName: Full=30S ribosomal protein S3
gi|172048052|sp|A5UDU1|RS3_HAEIE RecName: Full=30S ribosomal protein S3
gi|172048056|sp|A5UHT6|RS3_HAEIG RecName: Full=30S ribosomal protein S3
gi|68057578|gb|AAX87831.1| 30S ribosomal protein S3 [Haemophilus influenzae 86-028NP]
gi|144980101|gb|EDJ89760.1| 30S ribosomal protein S3 [Haemophilus influenzae 22.1-21]
gi|144983918|gb|EDJ91360.1| 30S ribosomal protein S3 [Haemophilus influenzae R3021]
gi|144987044|gb|EDJ93574.1| 30S ribosomal protein S3 [Haemophilus influenzae 3655]
gi|145267972|gb|EDK07968.1| 30S ribosomal protein S3 [Haemophilus influenzae PittAA]
gi|145270186|gb|EDK10122.1| 30S ribosomal protein S3 [Haemophilus influenzae PittHH]
gi|145272746|gb|EDK12653.1| 30S ribosomal protein S3 [Haemophilus influenzae PittII]
gi|145274392|gb|EDK14256.1| 30S ribosomal protein S3 [Haemophilus influenzae 22.4-21]
gi|148716732|gb|ABQ98942.1| 30S ribosomal protein S3 [Haemophilus influenzae PittEE]
gi|148719214|gb|ABR00342.1| 30S ribosomal protein S3 [Haemophilus influenzae PittGG]
gi|229810837|gb|EEP46554.1| 30S ribosomal protein S3 [Haemophilus influenzae 7P49H1]
gi|229812364|gb|EEP48054.1| 30S ribosomal protein S3 [Haemophilus influenzae 6P18H1]
gi|301169500|emb|CBW29101.1| 30S ribosomal subunit protein S3 [Haemophilus influenzae 10810]
gi|309751556|gb|ADO81540.1| 30S ribosomal protein S3 [Haemophilus influenzae R2866]
gi|309973726|gb|ADO96927.1| 30S ribosomal protein S3 [Haemophilus influenzae R2846]
gi|317433229|emb|CBY81604.1| 30S ribosomal subunit protein S3 [Haemophilus influenzae F3031]
gi|327472053|gb|EGF17491.1| 30S ribosomal protein S3 [Haemophilus aegyptius ATCC 11116]
Length = 235
Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats.
Identities = 112/225 (49%), Positives = 155/225 (68%), Gaps = 1/225 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ W+S WFA ++ L D K+R++L L A V++I IER
Sbjct: 1 MGQKVHPHGIRLGIVKPWSSTWFANTQDFADNLEGDFKVRKFLNKELANASVSRITIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R +S + +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVSKIAGVPAQINIAEVKKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQSAMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQSAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY TA A T YG G+KV++ + E+ + + +E + +K
Sbjct: 181 DIDYNTAEAHTTYGVIGVKVWIF-KGEILGGMAAVAQSEQQPADK 224
>gi|293391701|ref|ZP_06636035.1| ribosomal protein S3 [Aggregatibacter actinomycetemcomitans D7S-1]
gi|290952235|gb|EFE02354.1| ribosomal protein S3 [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 235
Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats.
Identities = 108/231 (46%), Positives = 152/231 (65%), Gaps = 5/231 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ W+S WFA ++ L D K+R++L L A V++I IER
Sbjct: 1 MGQKVHPHGIRLGIVKPWSSTWFANTQDFADNLEGDFKVRKFLNKELANASVSRITIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVAKIAGVPAQINIAEVKKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMK+AVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKKAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-----SDSTIPAAEHRVVEKD 226
IDY TA A T YG G+KV++ + + PA + + +
Sbjct: 181 DIDYNTAEAHTTYGVIGVKVWIFKGEILGGMAALTQPEQQPADKPKKAPRG 231
>gi|254362068|ref|ZP_04978193.1| ribosomal protein S3 [Mannheimia haemolytica PHL213]
gi|261493003|ref|ZP_05989545.1| ribosomal protein S3 [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261495177|ref|ZP_05991640.1| ribosomal protein S3 [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|153093624|gb|EDN74589.1| ribosomal protein S3 [Mannheimia haemolytica PHL213]
gi|261309153|gb|EEY10393.1| ribosomal protein S3 [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261311347|gb|EEY12508.1| ribosomal protein S3 [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 235
Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats.
Identities = 109/231 (47%), Positives = 153/231 (66%), Gaps = 5/231 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS WFA ++ L D K+R++L L A V++I IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTQDFADNLDGDFKVRKFLNKELANASVSRITIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVAKIAGVPAQINIAEVKKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMK+AVQ+AM+ GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKKAVQNAMKLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-----SDSTIPAAEHRVVEKD 226
IDY TA A T YG G+KV++ + + PAA+ + +
Sbjct: 181 DIDYSTAEAHTTYGVIGVKVWIFKGEILGGMAAVIESEKEPAAQPKKAPRG 231
>gi|315633461|ref|ZP_07888751.1| 30S ribosomal protein S3 [Aggregatibacter segnis ATCC 33393]
gi|315477503|gb|EFU68245.1| 30S ribosomal protein S3 [Aggregatibacter segnis ATCC 33393]
Length = 235
Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats.
Identities = 109/225 (48%), Positives = 154/225 (68%), Gaps = 1/225 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ W+S WFA ++ L D K+R++L L A V++I IER
Sbjct: 1 MGQKVHPHGIRLGIVKPWSSTWFANTQDFADNLEGDFKVRQFLNKELANASVSRITIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVAKIAGVPAQINIAEVKKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMK+AVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKKAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY TA A T YG G+KV++ + E+ + + E + +K
Sbjct: 181 DIDYNTAEAHTTYGVIGVKVWIF-KGEILGGMAALAQPEQQPADK 224
>gi|254463292|ref|ZP_05076708.1| ribosomal protein S3 [Rhodobacterales bacterium HTCC2083]
gi|206679881|gb|EDZ44368.1| ribosomal protein S3 [Rhodobacteraceae bacterium HTCC2083]
Length = 235
Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats.
Identities = 129/225 (57%), Positives = 169/225 (75%), Gaps = 4/225 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K NPI RL VN TW+SRW+A +YG LL EDL IR+++ KQAG+A+++IER
Sbjct: 1 MGNKTNPIGMRLQVNRTWDSRWYADSKDYGNLLLEDLAIRDFVNKECKQAGIARVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +++ARPG+IIGKKG DIE +RKKL+ +T+SE+HL++ EV KPE++A L+ +SI
Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIETLRKKLAKITDSELHLNIVEVRKPELDAQLVGESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
+QQLERRV FRRAMKRAVQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 SQQLERRVSFRRAMKRAVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY AETAYG GIK ++ + E+ + D P A R ++
Sbjct: 181 DIDYAHVEAETAYGIIGIKTWIF-KGEIMEHD---PQARDRKAQE 221
>gi|148263146|ref|YP_001229852.1| 30S ribosomal protein S3 [Geobacter uraniireducens Rf4]
gi|189045010|sp|A5GAX1|RS3_GEOUR RecName: Full=30S ribosomal protein S3
gi|146396646|gb|ABQ25279.1| SSU ribosomal protein S3P [Geobacter uraniireducens Rf4]
Length = 210
Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats.
Identities = 116/211 (54%), Positives = 162/211 (76%), Gaps = 1/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI FRLGV TW+S+W+A +Y LLHEDLK+R +L+ L +GV+KI IER
Sbjct: 1 MGQKVNPIGFRLGVIKTWDSKWYAE-KDYAKLLHEDLKLRSFLKKRLYHSGVSKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I +++ARPGLIIGKKG+++E ++K+L+ +T+ E++L++ EV KPE++A L+A++I
Sbjct: 60 AGKAKINIFTARPGLIIGKKGSEVETLKKELAKLTDKEVYLNIQEVRKPELDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV FRRAMK++V S+++FGA G+++ SGRL GAE+SRTE Y EGRVPL TLRA
Sbjct: 120 ALQLERRVAFRRAMKKSVTSSLKFGAKGIRITCSGRLGGAEMSRTEWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYG A A+T YG G+KV + + +S
Sbjct: 180 DIDYGFAEAKTTYGIIGVKVLLFKGEVLSGK 210
>gi|223041823|ref|ZP_03612013.1| 30S ribosomal protein S3 [Actinobacillus minor 202]
gi|240947878|ref|ZP_04752318.1| 30S ribosomal protein S3 [Actinobacillus minor NM305]
gi|223017392|gb|EEF15813.1| 30S ribosomal protein S3 [Actinobacillus minor 202]
gi|240297840|gb|EER48276.1| 30S ribosomal protein S3 [Actinobacillus minor NM305]
Length = 235
Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats.
Identities = 110/231 (47%), Positives = 153/231 (66%), Gaps = 5/231 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS WFA ++ L D K+R++L L A V++I IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTQDFADNLDGDFKVRKFLNKELANASVSRITIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVAKIAGVPAQINIAEVKKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AM+ GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMKLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-----SDSTIPAAEHRVVEKD 226
IDY TA A T YG G+KV++ + + PAA+ + +
Sbjct: 181 DIDYNTAEAHTTYGVIGVKVWIFKGEILGGMAAVIESEKEPAAQPKKAPRG 231
>gi|16272724|ref|NP_438942.1| 30S ribosomal protein S3 [Haemophilus influenzae Rd KW20]
gi|260579874|ref|ZP_05847704.1| ribosomal protein S3 [Haemophilus influenzae RdAW]
gi|1173250|sp|P44372|RS3_HAEIN RecName: Full=30S ribosomal protein S3
gi|1573793|gb|AAC22442.1| ribosomal protein S3 (rpS3) [Haemophilus influenzae Rd KW20]
gi|260093158|gb|EEW77091.1| ribosomal protein S3 [Haemophilus influenzae RdAW]
Length = 235
Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats.
Identities = 112/225 (49%), Positives = 155/225 (68%), Gaps = 1/225 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ W+S WFA ++ L D K+R++L L A V++I IER
Sbjct: 1 MGQKVHPHGIRLGIVKPWSSTWFANTQDFADNLEGDFKVRKFLNKELASASVSRITIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R +S + +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVSKIAGVPAQINIAEVKKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQSAMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQSAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY TA A T YG G+KV++ + E+ + + +E + +K
Sbjct: 181 DIDYNTAEAHTTYGVIGVKVWIF-KGEILGGMAAVAQSEQQPADK 224
>gi|56418647|ref|YP_145965.1| 30S ribosomal protein S3 [Geobacillus kaustophilus HTA426]
gi|261417613|ref|YP_003251295.1| 30S ribosomal protein S3 [Geobacillus sp. Y412MC61]
gi|297528488|ref|YP_003669763.1| ribosomal protein S3 [Geobacillus sp. C56-T3]
gi|319765271|ref|YP_004130772.1| ribosomal protein S3 [Geobacillus sp. Y412MC52]
gi|61215363|sp|Q5L417|RS3_GEOKA RecName: Full=30S ribosomal protein S3
gi|56378489|dbj|BAD74397.1| 30S ribosomal protein S3 (BS2) [Geobacillus kaustophilus HTA426]
gi|261374070|gb|ACX76813.1| ribosomal protein S3 [Geobacillus sp. Y412MC61]
gi|297251740|gb|ADI25186.1| ribosomal protein S3 [Geobacillus sp. C56-T3]
gi|317110137|gb|ADU92629.1| ribosomal protein S3 [Geobacillus sp. Y412MC52]
Length = 218
Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats.
Identities = 103/219 (47%), Positives = 153/219 (69%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI R+G+ W SRW+A +Y LLHEDLKIREY+ L+ A V+++ IER
Sbjct: 1 MGQKVNPIGLRIGIIRDWESRWYAE-KDYADLLHEDLKIREYISKRLQDAAVSRVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G+++E +RK L+ +T +H+++ E+ KP+++A L+A++I
Sbjct: 60 ANRVNVTIHTAKPGMVIGKGGSEVEALRKALAQLTGKRVHINIVEIKKPDLDARLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRA K+A+Q AMR GA G+K + SGRL GA+++R+E Y EG VPL TLRA
Sbjct: 120 ARQLENRVSFRRAQKQAIQRAMRAGAKGIKTMVSGRLGGADIARSEHYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDYGTA A+T YG G+KV++ + + +
Sbjct: 180 DIDYGTAEADTTYGKIGVKVWIYRGEVLPTKKKAEEGGK 218
>gi|319761144|ref|YP_004125081.1| ribosomal protein s3 [Alicycliphilus denitrificans BC]
gi|330823002|ref|YP_004386305.1| 30S ribosomal protein S3 [Alicycliphilus denitrificans K601]
gi|317115705|gb|ADU98193.1| ribosomal protein S3 [Alicycliphilus denitrificans BC]
gi|329308374|gb|AEB82789.1| ribosomal protein S3 [Alicycliphilus denitrificans K601]
Length = 290
Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats.
Identities = 121/224 (54%), Positives = 161/224 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V+ W SRW+A ++ +L ED+K+RE+L+ LK A V++ILIER
Sbjct: 1 MGQKIHPTGFRLSVSRNWASRWYASNRDFAGMLAEDIKVREFLKAKLKNAAVSRILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI +YSARPG++IGKKG DIE ++K+L+ + +++ EV KPEI+A LIA SI
Sbjct: 61 AKNARITIYSARPGVVIGKKGEDIENLKKELATRLGVPVAVNIEEVRKPEIDAKLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLE+R+ FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLEKRIQFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
IDYGT+ A+T YG G+KV+V D + D + E
Sbjct: 181 DIDYGTSEAKTTYGVIGVKVWVYKGDTLGRGDLPVAETPRPDDE 224
>gi|221069444|ref|ZP_03545549.1| ribosomal protein S3 [Comamonas testosteroni KF-1]
gi|264676448|ref|YP_003276354.1| ribosomal protein S3 [Comamonas testosteroni CNB-2]
gi|299531230|ref|ZP_07044641.1| 30S ribosomal protein S3 [Comamonas testosteroni S44]
gi|220714467|gb|EED69835.1| ribosomal protein S3 [Comamonas testosteroni KF-1]
gi|262206960|gb|ACY31058.1| ribosomal protein S3 [Comamonas testosteroni CNB-2]
gi|298720813|gb|EFI61759.1| 30S ribosomal protein S3 [Comamonas testosteroni S44]
Length = 289
Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats.
Identities = 123/226 (54%), Positives = 166/226 (73%), Gaps = 2/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V+ W SRW+A ++ +L ED+K+REYL+ LK A VA++LIER
Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYASNRDFAGMLAEDIKVREYLKAKLKNAAVARVLIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI ++SARPG++IGKKG DIE ++K+L+ + +++ EV KPEI+A LIA SI
Sbjct: 61 AKNARITIFSARPGVVIGKKGEDIEALKKELAARLGVPVAVNIEEVRKPEIDAKLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 CQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDYG + A+T YG G+KV+V D + +D +PA E E +
Sbjct: 181 DIDYGFSEAKTTYGIIGVKVWVYKGDTLGRND--LPAVETPRPEDE 224
>gi|85703995|ref|ZP_01035098.1| 30S ribosomal protein S3 [Roseovarius sp. 217]
gi|149203518|ref|ZP_01880488.1| 30S ribosomal protein S3 [Roseovarius sp. TM1035]
gi|85671315|gb|EAQ26173.1| 30S ribosomal protein S3 [Roseovarius sp. 217]
gi|149143351|gb|EDM31390.1| 30S ribosomal protein S3 [Roseovarius sp. TM1035]
Length = 235
Score = 272 bits (695), Expect = 3e-71, Method: Composition-based stats.
Identities = 130/225 (57%), Positives = 169/225 (75%), Gaps = 4/225 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+NPI RL VN TW+SRW+A +YG LL EDL +R+++ KQAG+++++IER
Sbjct: 1 MGNKVNPIGMRLQVNRTWDSRWYADTKDYGNLLLEDLAMRKFIGEECKQAGISRVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +++ARPG+IIGKKG DIE +RKKL+ MT SE+HL++ EV KPE++A L+ +SI
Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIEGLRKKLAAMTASELHLNIVEVRKPELDAALVGESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQ+AMR GA G++V SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVSFRRAMKRAVQNAMRMGALGIRVNVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY A TAYG GIKV++ + E+ + D P A R ++
Sbjct: 181 DIDYAPVEATTAYGIIGIKVWIF-KGEIMEHD---PGARDRKAQE 221
>gi|169630894|ref|YP_001704543.1| 30S ribosomal protein S3 [Mycobacterium abscessus ATCC 19977]
gi|226697732|sp|B1MGE4|RS3_MYCA9 RecName: Full=30S ribosomal protein S3
gi|169242861|emb|CAM63889.1| 30S ribosomal protein S3 [Mycobacterium abscessus]
Length = 277
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 104/218 (47%), Positives = 145/218 (66%), Gaps = 2/218 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG+ W SRW+A +Y + ED+ IR L L++AG+AK+ IERT
Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYADYVKEDVAIRRLLATGLERAGIAKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++GT+ ++IR L +T ++ L++ EV PE A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTGKQVQLNILEVKNPEAEAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR
Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
A IDYG A+T +G G+KV++ D V A
Sbjct: 180 ADIDYGLYEAKTTFGRIGVKVWIYKGDIVGGKRELAAA 217
>gi|126724869|ref|ZP_01740712.1| 30S ribosomal protein S3 [Rhodobacterales bacterium HTCC2150]
gi|126706033|gb|EBA05123.1| 30S ribosomal protein S3 [Rhodobacterales bacterium HTCC2150]
Length = 235
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 128/225 (56%), Positives = 172/225 (76%), Gaps = 4/225 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+NPI RL VN TW+SRW+A ++ LL EDL +R+++ KQAG+++++IER
Sbjct: 1 MGNKVNPIGMRLQVNRTWDSRWYADSKDFSTLLLEDLAMRKFIGEECKQAGISRVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +++ARPG+IIGKKG DIE +RKKL++MT+SE+HL++ EV KPE++A L+A++I
Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIEGLRKKLADMTDSELHLNIVEVRKPEMDAPLVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVSFRRAMKRAVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY A TAYG GIKV++ + E+ + D PAA R ++
Sbjct: 181 DIDYSHKEALTAYGIIGIKVWIF-KGEIMEHD---PAARDRRQQE 221
>gi|260581601|ref|ZP_05849398.1| ribosomal protein S3 [Haemophilus influenzae NT127]
gi|260095194|gb|EEW79085.1| ribosomal protein S3 [Haemophilus influenzae NT127]
Length = 235
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 112/225 (49%), Positives = 155/225 (68%), Gaps = 1/225 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ W+S WFA ++ L D K+R++L L A V++I IER
Sbjct: 1 MGQKVHPHGIRLGIVKPWSSTWFANTQDFADNLEGDFKVRKFLNKELANASVSRITIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R +S + +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNTVSKIAGVPAQINIAEVKKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQSAMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQSAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY TA A T YG G+KV++ + E+ + + +E + +K
Sbjct: 181 DIDYNTAEAHTTYGVIGVKVWIF-KGEILGGMAAVAQSEQQPTDK 224
>gi|120553658|ref|YP_958009.1| 30S ribosomal protein S3 [Marinobacter aquaeolei VT8]
gi|152060872|sp|A1TYK3|RS3_MARAV RecName: Full=30S ribosomal protein S3
gi|120323507|gb|ABM17822.1| SSU ribosomal protein S3P [Marinobacter aquaeolei VT8]
Length = 227
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 106/213 (49%), Positives = 153/213 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+NP RLGV NS W+A +Y L D+++RE+L L +A V+KI+IER
Sbjct: 1 MGHKVNPTGIRLGVIKEHNSVWYADKKDYAKNLLNDIQVREFLDKRLVKASVSKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+N RI +++ARPG++IGKKG D++++R+++S+M +H+++ EV KP+++A L+AQ++
Sbjct: 61 AQNARITIHTARPGIVIGKKGEDVDRLRREVSDMMGVPVHINIEEVRKPDLDARLVAQNV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+K+ GRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 AGQLERRVMFRRAMKRAVQNAMRQGAKGIKIQVGGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
IDY T A T YG G+KV++ + + +
Sbjct: 181 DIDYATYEAHTTYGVIGVKVWIFKGEILGGMEQ 213
>gi|114797822|ref|YP_761523.1| 30S ribosomal protein S3 [Hyphomonas neptunium ATCC 15444]
gi|122942159|sp|Q0BYC0|RS3_HYPNA RecName: Full=30S ribosomal protein S3
gi|114737996|gb|ABI76121.1| ribosomal protein S3 [Hyphomonas neptunium ATCC 15444]
Length = 245
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 131/224 (58%), Positives = 174/224 (77%), Gaps = 4/224 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N T +SRW+A +++G LLHED+ IR+ ++ LKQAG++KI+IER
Sbjct: 1 MGQKVNPIGLRLGINRTADSRWYADSADFGRLLHEDISIRKAIREKLKQAGISKIIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK C I +++ARPGL+IGKKG DIE +RK+L+ MT+ E+ +++ E+ KPEI+ATLIA I
Sbjct: 61 HKKCLITIHTARPGLVIGKKGGDIEVLRKELAKMTSDEVRVNLVEIRKPEIDATLIADDI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLERR FRRAMKR++QSAMR GA+GVKV+ SGRL GAE++RTE Y EG VPL TLRA
Sbjct: 121 ARQLERRASFRRAMKRSIQSAMRLGAEGVKVVVSGRLGGAEIARTEKYAEGSVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
IDYGTA A T YG G+KV+V + E+ + D P A+ + +E
Sbjct: 181 DIDYGTAEATTTYGIIGVKVWVY-KGEILEHD---PMAQDKRLE 220
>gi|32035719|ref|ZP_00135600.1| COG0092: Ribosomal protein S3 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|126209230|ref|YP_001054455.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae L20]
gi|165977202|ref|YP_001652795.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
gi|303250018|ref|ZP_07336220.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|303253192|ref|ZP_07339341.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 2
str. 4226]
gi|307246695|ref|ZP_07528765.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 1
str. 4074]
gi|307248837|ref|ZP_07530850.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 2
str. S1536]
gi|307251064|ref|ZP_07532988.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 4
str. M62]
gi|307253450|ref|ZP_07535321.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|307255680|ref|ZP_07537484.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 9
str. CVJ13261]
gi|307257863|ref|ZP_07539620.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|307260132|ref|ZP_07541842.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|307262261|ref|ZP_07543910.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|307264470|ref|ZP_07546055.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|152060840|sp|A3N364|RS3_ACTP2 RecName: Full=30S ribosomal protein S3
gi|126098022|gb|ABN74850.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar
5b str. L20]
gi|165877303|gb|ABY70351.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
gi|302647874|gb|EFL78081.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 2
str. 4226]
gi|302651081|gb|EFL81235.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|306852395|gb|EFM84630.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 1
str. 4074]
gi|306854764|gb|EFM86954.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 2
str. S1536]
gi|306856894|gb|EFM89026.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 4
str. M62]
gi|306859129|gb|EFM91171.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|306861357|gb|EFM93347.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 9
str. CVJ13261]
gi|306863769|gb|EFM95695.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|306865778|gb|EFM97656.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|306868024|gb|EFM99851.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|306870167|gb|EFN01926.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
Length = 235
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 112/231 (48%), Positives = 153/231 (66%), Gaps = 5/231 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS WFA ++ L D K+R++L L A V++I IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTQDFADNLDGDFKVRKFLNKELANASVSRITIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R +S + +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVSQIAGVPAQINIAEVKKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-----SDSTIPAAEHRVVEKD 226
IDY TA A T YG G+KV++ + + PAA+ + +
Sbjct: 181 DIDYNTAEAHTTYGVIGVKVWIFKGEILGGMAAVIESEKEPAAQPKKAPRG 231
>gi|86135769|ref|ZP_01054348.1| 30S ribosomal protein S3 [Roseobacter sp. MED193]
gi|85826643|gb|EAQ46839.1| 30S ribosomal protein S3 [Roseobacter sp. MED193]
Length = 236
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 126/225 (56%), Positives = 171/225 (76%), Gaps = 4/225 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+NP+ RL +N TW+SRW+A ++G LL ED+K+R++++ KQAG+A+++IER
Sbjct: 1 MGHKVNPVGMRLQINRTWDSRWYADTKDFGDLLLEDIKLRDFIKDECKQAGIARVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +++ARPG+IIGKKG DIE +RKKL++MT+SE+HL++ EV KPE++A L+ +SI
Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIEVLRKKLASMTDSELHLNIVEVRKPELDAQLVGESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVSFRRAMKRAVQSAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY A T YG GIK ++ + E+ + D P A R ++
Sbjct: 181 DIDYAHNEAMTPYGIIGIKTWIF-KGEIMEHD---PQARDRKAQE 221
>gi|294085964|ref|YP_003552724.1| 30S ribosomal protein S3 [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292665539|gb|ADE40640.1| ribosomal protein S3 [Candidatus Puniceispirillum marinum IMCC1322]
Length = 231
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 131/227 (57%), Positives = 168/227 (74%), Gaps = 4/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+ PI R+G+N TW+SRW+A G YG LLHED+K+REYL LKQA +++++IER
Sbjct: 1 MGQKVKPIGLRVGINRTWDSRWYA-GRNYGTLLHEDIKLREYLMERLKQAAISRVVIERP 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ RPGLIIGKKG DIEK+R LS E+ L++ EV KPEI+A L+A++I
Sbjct: 60 AGRARVTIHAGRPGLIIGKKGQDIEKLRLDLSKRIGGEVSLNIVEVRKPEIDAKLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA GV++ +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 120 AQQLERRVGFRRAMKRAVQSAMRLGALGVRINCAGRLGGAEIARTEWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
+DYG A A T YG+CGIKV+V + EV D A + R+ E+ +
Sbjct: 180 EVDYGEATAFTTYGACGIKVWVF-KGEVMAHDPM--AQDKRLAEQQA 223
>gi|217967375|ref|YP_002352881.1| ribosomal protein S3 [Dictyoglomus turgidum DSM 6724]
gi|226697701|sp|B8E1D9|RS3_DICTD RecName: Full=30S ribosomal protein S3
gi|217336474|gb|ACK42267.1| ribosomal protein S3 [Dictyoglomus turgidum DSM 6724]
Length = 245
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 106/227 (46%), Positives = 151/227 (66%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +P FRLG+ W S W+A S+Y +LLHED IR Y++ + QAG++ I IER
Sbjct: 1 MGQKTHPYGFRLGITKDWKSHWYAERSDYSSLLHEDWAIRNYIKKNYYQAGISLIEIERK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
I +++ARPG++IG+ G++IE IRK L +TN + ++V EV PE++A L+A++
Sbjct: 61 AANRVDITIHTARPGMLIGRGGSEIENIRKNLVKLTNKSVFVNVQEVKNPELDAQLVAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA Q+E+R+ ++RAMK+A+ A+R GA GVKV+ SGRLNGAE++R+E + EGR+PLQTL
Sbjct: 121 IATQIEKRINYKRAMKQAINRALRAGAKGVKVMCSGRLNGAEIARSEWFREGRIPLQTLT 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
A IDYG A A T G G+KV++ D I + V K
Sbjct: 181 ADIDYGFAEAFTISGVIGVKVWIYKGDVPELHKEPIQELPEKAVPKK 227
>gi|221133620|ref|ZP_03559925.1| 30S ribosomal protein S3 [Glaciecola sp. HTCC2999]
Length = 234
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 106/226 (46%), Positives = 152/226 (67%), Gaps = 5/226 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG++ W S W+A ++Y L D ++R+YL LK A ++KI+IER
Sbjct: 1 MGQKVHPTGIRLGISKPWTSTWYANTADYADNLFNDHQVRQYLTKQLKSASLSKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ ++ +++ARPG++IGKKG D+EK+R +S + +++ EV KPE++ L+A SI
Sbjct: 61 AKSIKVTIHTARPGVVIGKKGEDVEKLRNHVSKLAGVPAQINIAEVRKPELDGQLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
+ QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL T RA
Sbjct: 121 SSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTFRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-----SDSTIPAAEHR 221
IDY T+ A T YG G+KV++ + + PA + +
Sbjct: 181 DIDYATSEANTTYGIIGVKVWIFKGEVLGGLPLTQEQPAAPAPKKK 226
>gi|109896804|ref|YP_660059.1| 30S ribosomal protein S3 [Pseudoalteromonas atlantica T6c]
gi|122972344|sp|Q15YN3|RS3_PSEA6 RecName: Full=30S ribosomal protein S3
gi|109699085|gb|ABG39005.1| SSU ribosomal protein S3P [Pseudoalteromonas atlantica T6c]
gi|332172255|gb|AEE21509.1| ribosomal protein S3 [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 232
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 109/226 (48%), Positives = 151/226 (66%), Gaps = 2/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG++ W S W+A ++Y L D ++R+YL LK A ++KI+IER
Sbjct: 1 MGQKVHPTGIRLGISKPWTSTWYANTADYADNLFNDHQVRQYLTKALKTASLSKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK +S + +++ EV KPE++ L+A SI
Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRKHVSKLAGVPAQINIAEVRKPELDGQLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R E Y EGRVPL T RA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRIGAKGIKVQVSGRLGGAEIARAEWYREGRVPLHTFRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV--SDSDSTIPAAEHRVVE 224
IDY T+ A T YG G+KV++ + + PA +
Sbjct: 181 DIDYATSEANTTYGIIGVKVWIFKGEVLGGLPLTQEQPAQPKKKGR 226
>gi|239825699|ref|YP_002948323.1| 30S ribosomal protein S3 [Geobacillus sp. WCH70]
gi|259495250|sp|C5D3S3|RS3_GEOSW RecName: Full=30S ribosomal protein S3
gi|239805992|gb|ACS23057.1| ribosomal protein S3 [Geobacillus sp. WCH70]
Length = 218
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 104/219 (47%), Positives = 154/219 (70%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ R+G+ W+SRW+A +Y LLHEDLKIREY+ L+ A V++I IER
Sbjct: 1 MGQKVNPVGLRIGIIRDWDSRWYAE-KDYADLLHEDLKIREYINKRLQDAAVSRIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK G+++E +RK L+ +T +H+++ E+ KP+++A L+A++I
Sbjct: 60 ANRVNITIHTAKPGMVIGKGGSEVEALRKALTQLTGKRVHINIVEIKKPDLDAKLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRA K+A+Q AMR GA G+K + SGRL GA+++R+E Y EG VPL TLRA
Sbjct: 120 ARQLENRVSFRRAQKQAIQRAMRAGAKGIKTMVSGRLGGADIARSEHYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDY TA A+T YG G+KV++ + + T +
Sbjct: 180 DIDYATAEADTTYGKLGVKVWIYRGEVLPTKKKTEEGGK 218
>gi|49474398|ref|YP_032440.1| 30S ribosomal protein S3 [Bartonella quintana str. Toulouse]
gi|61215534|sp|Q6FZC8|RS3_BARQU RecName: Full=30S ribosomal protein S3
gi|49239902|emb|CAF26300.1| 30s ribosomal protein s3 [Bartonella quintana str. Toulouse]
Length = 236
Score = 271 bits (694), Expect = 4e-71, Method: Composition-based stats.
Identities = 145/224 (64%), Positives = 176/224 (78%), Gaps = 3/224 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RLGVN TW+SRW+A EYG LLHEDL IR Y+ LKQA ++K++IER
Sbjct: 1 MGQKINPIGLRLGVNRTWDSRWYADSGEYGRLLHEDLSIRLYVLEELKQAAISKVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +YSARPGLIIGKKG DIEK+R+KLS MTN+E L++ E+ KPEI+AT+IAQSI
Sbjct: 61 HKKCRVTIYSARPGLIIGKKGADIEKLRRKLSEMTNAETSLNIVEIHKPEIDATIIAQSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSAMR GA+G+++ SGRL GAE++R E Y EGRVPL TLR+
Sbjct: 121 AQQLERRVAFRRAMKRAVQSAMRLGAEGIRINCSGRLGGAEIARMEWYREGRVPLHTLRS 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
+DYGTA A+TAYG CG+KV+V + + A+E R VE
Sbjct: 181 DVDYGTAEAKTAYGICGVKVWVFKGEILEYDPI---ASERRSVE 221
>gi|119502930|ref|ZP_01625015.1| 30S ribosomal protein S3 [marine gamma proteobacterium HTCC2080]
gi|119461276|gb|EAW42366.1| 30S ribosomal protein S3 [marine gamma proteobacterium HTCC2080]
Length = 223
Score = 271 bits (693), Expect = 5e-71, Method: Composition-based stats.
Identities = 104/213 (48%), Positives = 148/213 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ NS W+A Y L DL++R+Y+ L A V++++IER
Sbjct: 1 MGQKVHPTGIRLGIVKDHNSVWYADSKAYAKNLISDLEVRDYVLKKLDAASVSRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ R+ +++ARPG++IGKKG D+EK+R+ LS +H+++ E+ KP+++A L+AQ++
Sbjct: 61 AQTARLTIHTARPGIVIGKKGEDVEKLRRDLSAKMGVPVHINIEEIRKPDLDARLVAQNV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV+FRRAMKR VQ+AMR GA G+KV GRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVMFRRAMKRVVQNAMRQGAQGIKVQVGGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
IDY T A T YG G+KV++ + + D
Sbjct: 181 DIDYATYEAHTTYGVIGVKVWIFKGEVIGSEDE 213
>gi|261866789|ref|YP_003254711.1| 30S ribosomal protein S3 [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|2500396|sp|P55827|RS3_ACTAC RecName: Full=30S ribosomal protein S3
gi|1841328|dbj|BAA10953.1| ribosomal protein S3 [Actinobacillus actinomycetemcomitans]
gi|261412121|gb|ACX81492.1| ribosomal protein S3 [Aggregatibacter actinomycetemcomitans D11S-1]
Length = 235
Score = 271 bits (693), Expect = 5e-71, Method: Composition-based stats.
Identities = 109/225 (48%), Positives = 154/225 (68%), Gaps = 1/225 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ W+S WFA ++ L D K+R++L L A V++I IER
Sbjct: 1 MGQKVHPHGIRLGIVKPWSSTWFANTQDFADNLEGDFKVRQFLNKELANASVSRITIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVAKIAGVPAQINIAEVKKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMK+AVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKKAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY TA A T YG G+KV++ + E+ + + E + +K
Sbjct: 181 DIDYNTAEAHTTYGVIGVKVWIF-KGEILGGMAALAQPEQQPTDK 224
>gi|262273373|ref|ZP_06051187.1| SSU ribosomal protein S3p (S3e) [Grimontia hollisae CIP 101886]
gi|262222351|gb|EEY73662.1| SSU ribosomal protein S3p (S3e) [Grimontia hollisae CIP 101886]
Length = 229
Score = 271 bits (693), Expect = 5e-71, Method: Composition-based stats.
Identities = 111/226 (49%), Positives = 154/226 (68%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS WFA ++ L D K+R++L L +A V++I+IER
Sbjct: 1 MGQKVHPNGIRLGICKPWNSTWFANSQDFADNLDGDFKVRQFLTKELSKASVSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R +++ + +++ EV KPE++A L+ SI
Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRARVAQLAGVPAQINIAEVRKPELDAQLVGDSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDY T+ A T YG GIKV++ + + P AE ++
Sbjct: 181 DIDYATSSAHTTYGVIGIKVWIFKGEVLGGMPVAEPQAEKPKKQRK 226
>gi|319775283|ref|YP_004137771.1| 30S ribosomal subunit protein S3 [Haemophilus influenzae F3047]
gi|317449874|emb|CBY86085.1| 30S ribosomal subunit protein S3 [Haemophilus influenzae F3047]
Length = 235
Score = 271 bits (693), Expect = 5e-71, Method: Composition-based stats.
Identities = 112/225 (49%), Positives = 156/225 (69%), Gaps = 1/225 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ W+S WFA ++ L D K+R++L L A V++I IER
Sbjct: 1 MGQKVHPHGIRLGIVKPWSSTWFANTQDFADNLEGDFKVRKFLNKELANASVSRITIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R +S + + +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVSKIASVPAQINIAEVKKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQSAMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQSAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY TA A T YG G+KV++ + E+ + + +E + +K
Sbjct: 181 DIDYNTAEAHTTYGVIGVKVWIF-KGEILGGMAAVAQSEQQPADK 224
>gi|281602679|gb|ADA75663.1| 30S ribosomal protein S3 [Shigella flexneri 2002017]
Length = 224
Score = 271 bits (693), Expect = 5e-71, Method: Composition-based stats.
Identities = 112/220 (50%), Positives = 154/220 (70%), Gaps = 1/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS WFA E+ L D K+R+YL L +A V++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
IDY T+ A T YG G+KV++ + E+ + + E
Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIF-KGEILGGMAAVEQPEK 219
>gi|309703726|emb|CBJ03067.1| 30S ribosomal subunit protein S3 [Escherichia coli ETEC H10407]
Length = 232
Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats.
Identities = 114/230 (49%), Positives = 156/230 (67%), Gaps = 4/230 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS WFA E+ L D K+R+YL L +A V++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + + PAA+ + K
Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQRKG 230
>gi|186477582|ref|YP_001859052.1| 30S ribosomal protein S3 [Burkholderia phymatum STM815]
gi|226697676|sp|B2JI60|RS3_BURP8 RecName: Full=30S ribosomal protein S3
gi|184194041|gb|ACC72006.1| ribosomal protein S3 [Burkholderia phymatum STM815]
Length = 264
Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats.
Identities = 116/229 (50%), Positives = 165/229 (72%), Gaps = 2/229 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V+ W SRW+A + + A+L ED+ +REYL+ LK A V +++IER
Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNNNFAAMLQEDIGVREYLKKKLKNASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI ++S+RPG++IGKKG DIE ++ +L +H+++ E+ KPE +A LIA SI
Sbjct: 61 AKNARITIFSSRPGVVIGKKGEDIELLKSELQKRMGVPVHVNIEEIRKPETDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLERR++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI--PAAEHRVVEKDS 227
IDY T+ A+T YG G+KV+V D + +D+ + AE + +++
Sbjct: 181 DIDYATSEAKTTYGIIGVKVWVYKGDTLGRNDAPVVEEVAEEKRPRRNA 229
>gi|254516917|ref|ZP_05128975.1| ribosomal protein S3 [gamma proteobacterium NOR5-3]
gi|219674422|gb|EED30790.1| ribosomal protein S3 [gamma proteobacterium NOR5-3]
Length = 222
Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats.
Identities = 105/213 (49%), Positives = 151/213 (70%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ S W+A + Y L DL++R +++ L A V++I+IER
Sbjct: 1 MGQKVHPTGIRLGIVKDHTSVWYADRNNYAKQLVNDLQVRSFIEKKLDNASVSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ RI +++ARPG++IGKKG D++K+RK L+ +H+++ E+ KP+++A L+AQ++
Sbjct: 61 AQTARITIHTARPGIVIGKKGEDVDKLRKVLAEKMGVPVHINIEEIRKPDLDARLVAQNV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV+FRRAMKR VQ+AMR GA+G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVMFRRAMKRVVQNAMRQGAEGIKVQVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
IDY T A T YG G+KV++ + + +S
Sbjct: 181 DIDYATYEAATTYGILGVKVWIFKGEVLGADES 213
>gi|331699170|ref|YP_004335409.1| 30S ribosomal protein S3 [Pseudonocardia dioxanivorans CB1190]
gi|326953859|gb|AEA27556.1| ribosomal protein S3 [Pseudonocardia dioxanivorans CB1190]
Length = 271
Score = 271 bits (693), Expect = 6e-71, Method: Composition-based stats.
Identities = 103/221 (46%), Positives = 147/221 (66%), Gaps = 2/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG+ W SRW+A +Y + ED++IR L +++AG++K+ IERT
Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYAEYVKEDVEIRRMLSKGMERAGISKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV E +A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGALEKLTKKQVQLNILEVKNAESDAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMR-FGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAMR G++V SGRL GAE+SR+E Y EGRVPL TLR
Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRSPQVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
A IDYG A T +G G+KV++ D V +PAA
Sbjct: 180 ADIDYGLFEARTTFGRIGVKVWIYKGDVVGGRREGVPAAAE 220
>gi|303256456|ref|ZP_07342470.1| ribosomal protein S3 [Burkholderiales bacterium 1_1_47]
gi|331000650|ref|ZP_08324303.1| ribosomal protein S3 [Parasutterella excrementihominis YIT 11859]
gi|302859947|gb|EFL83024.1| ribosomal protein S3 [Burkholderiales bacterium 1_1_47]
gi|329570862|gb|EGG52573.1| ribosomal protein S3 [Parasutterella excrementihominis YIT 11859]
Length = 264
Score = 271 bits (692), Expect = 6e-71, Method: Composition-based stats.
Identities = 120/225 (53%), Positives = 160/225 (71%), Gaps = 1/225 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRL V W SRW+A G ++ L EDLK+R+YL LK A V +ILIER
Sbjct: 1 MGQKINPTGFRLPVTHDWTSRWYATGRDFARTLAEDLKVRDYLGKKLKNASVGRILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI ++SARPG++IGKKG DIE ++ +L + +H+++ E+ +P+++A LIA SI
Sbjct: 61 AKNARITIFSARPGVVIGKKGEDIEVLKAELQKLMGVPVHVNIEEIRRPDLDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNGAE++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRQGALGIKIMSSGRLNGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDYG + A+T YG G+KV+V D + D A R +
Sbjct: 181 DIDYGFSEAQTTYGIIGVKVWVYKGDN-TGKDVAAEAPAEREDRR 224
>gi|190151120|ref|YP_001969645.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|189916251|gb|ACE62503.1| 30S ribosomal protein S3 [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
Length = 235
Score = 271 bits (692), Expect = 6e-71, Method: Composition-based stats.
Identities = 112/231 (48%), Positives = 153/231 (66%), Gaps = 5/231 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS WFA ++ L D K+R++L L A V++I IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTQDFADNLDGDFKVRKFLNKELANASVSRITIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R +S + +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVSQIAGVPAQINIAEVKKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEISGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-----SDSTIPAAEHRVVEKD 226
IDY TA A T YG G+KV++ + + PAA+ + +
Sbjct: 181 DIDYNTAEAHTTYGVIGVKVWIFKGEILGGMAAVIESEKEPAAQPKKAPRG 231
>gi|85060250|ref|YP_455952.1| 30S ribosomal protein S3 [Sodalis glossinidius str. 'morsitans']
gi|123766382|sp|Q2NQM8|RS3_SODGM RecName: Full=30S ribosomal protein S3
gi|84780770|dbj|BAE75547.1| 30S ribosomal protein S3 [Sodalis glossinidius str. 'morsitans']
Length = 232
Score = 271 bits (692), Expect = 6e-71, Method: Composition-based stats.
Identities = 110/229 (48%), Positives = 159/229 (69%), Gaps = 3/229 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS W+A E+ L D K+R++L L +A V++++IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWYANTKEFADNLDSDFKVRQFLTKELSKASVSRLVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
+ QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 SSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS---DSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + + + PAA+ + ++
Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEPAAQPKKQQRK 229
>gi|187476545|ref|YP_784569.1| 30S ribosomal protein S3 [Bordetella avium 197N]
gi|123766202|sp|Q2L2C0|RS3_BORA1 RecName: Full=30S ribosomal protein S3
gi|115421131|emb|CAJ47615.1| 30S ribosomal protein S3 [Bordetella avium 197N]
Length = 264
Score = 271 bits (692), Expect = 6e-71, Method: Composition-based stats.
Identities = 116/216 (53%), Positives = 162/216 (75%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V W+SRW+A ++G +L ED+++REYL+ LK A V +++IER
Sbjct: 1 MGQKIHPTGFRLAVTRNWSSRWYADDKDFGGMLAEDIRVREYLKKKLKSASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI VYSARPG++IGK+G DIE ++ L + +H+++ E+ KPE +A LIA SI
Sbjct: 61 AKNARITVYSARPGVVIGKRGEDIESLKADLQRLMGVPVHVNIEEIRKPETDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
+QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TL+A
Sbjct: 121 SQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLKA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
+IDYGT+ A T YG GIKV+V D +++ + +
Sbjct: 181 NIDYGTSEAHTTYGVIGIKVWVYKGDMLANGELPVE 216
>gi|295694843|ref|YP_003588081.1| ribosomal protein S3 [Bacillus tusciae DSM 2912]
gi|295410445|gb|ADG04937.1| ribosomal protein S3 [Bacillus tusciae DSM 2912]
Length = 226
Score = 271 bits (692), Expect = 7e-71, Method: Composition-based stats.
Identities = 110/227 (48%), Positives = 152/227 (66%), Gaps = 7/227 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ R+G+ W S+W+A EYG LL ED+KIR+Y+ LK A V+ + IER
Sbjct: 1 MGQKVSPVGLRIGIIRDWESKWYAGKKEYGKLLLEDVKIRDYIFKRLKDAAVSAVEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I V++A+PG++IGK GT++E +R L++MT +H+++ EV PE++A L+A+++
Sbjct: 61 ANRVNITVHTAKPGMVIGKGGTEVEALRAALAHMTGKRVHINIAEVKNPELSAKLVAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV FRRAMK+A+Q MR GA GVK+ SGRL GAE++RTE Y EG VPL TLRA
Sbjct: 121 ASQLERRVAFRRAMKQAIQRTMRAGAKGVKIQVSGRLAGAEIARTEGYSEGTVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDY A A T YG G+KV++ + + P R EK S
Sbjct: 181 DIDYALAEAHTTYGRIGVKVWIYRGEIL-------PVKGDRNAEKSS 220
>gi|83648846|ref|YP_437281.1| 30S ribosomal protein S3 [Hahella chejuensis KCTC 2396]
gi|123753505|sp|Q2S918|RS3_HAHCH RecName: Full=30S ribosomal protein S3
gi|83636889|gb|ABC32856.1| ribosomal protein S3 [Hahella chejuensis KCTC 2396]
Length = 227
Score = 271 bits (692), Expect = 7e-71, Method: Composition-based stats.
Identities = 102/217 (47%), Positives = 151/217 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ RLG+ NS W+A Y L D+K+RE+L L++A V+K++IER
Sbjct: 1 MGQKVNPVGIRLGIVKDHNSVWYADKKNYSDHLLTDIKVREFLMKKLEKASVSKVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+N +I +++ARPG++IGKKG D++++R+++ + +H+++ E+ KP+++A L+A +
Sbjct: 61 PQNAKITIHTARPGIVIGKKGEDVDRLRQEVGELMKVPVHINIEEIRKPDLDAKLVASGV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+K+ GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AGQLERRVMFRRAMKRAVQNAMRQGAKGIKIQVGGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
IDY T A T YG G+KV++ + + +
Sbjct: 181 DIDYATHEAHTTYGVIGVKVWIFKGEILGGIEQVRAE 217
>gi|251793833|ref|YP_003008565.1| 30S ribosomal protein S3 [Aggregatibacter aphrophilus NJ8700]
gi|247535232|gb|ACS98478.1| ribosomal protein S3 [Aggregatibacter aphrophilus NJ8700]
Length = 235
Score = 271 bits (692), Expect = 7e-71, Method: Composition-based stats.
Identities = 109/225 (48%), Positives = 154/225 (68%), Gaps = 1/225 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ W+S WFA ++ L D K+R++L L A V++I IER
Sbjct: 1 MGQKVHPHGIRLGIVKPWSSTWFANTQDFANNLEGDFKVRQFLNKELANASVSRITIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVAKIAGVPAQINIAEVKKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMK+AVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKKAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY TA A T YG G+KV++ + E+ + + E + +K
Sbjct: 181 DIDYNTAEAHTTYGVIGVKVWIF-KGEILGGMAALAQPEQQPADK 224
>gi|242237865|ref|YP_002986046.1| 30S ribosomal protein S3 [Dickeya dadantii Ech703]
gi|242129922|gb|ACS84224.1| ribosomal protein S3 [Dickeya dadantii Ech703]
Length = 233
Score = 271 bits (692), Expect = 7e-71, Method: Composition-based stats.
Identities = 113/230 (49%), Positives = 160/230 (69%), Gaps = 4/230 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ TWNS W+A E+ L D K+R+YL L++A V++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKTWNSTWYANTKEFADNLDSDFKVRQYLNKELEKASVSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKGVADIAGVPAQINIAEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
+ QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 SSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + + PAA+ + ++
Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRK 230
>gi|260914674|ref|ZP_05921140.1| 30S ribosomal protein S3 [Pasteurella dagmatis ATCC 43325]
gi|260631273|gb|EEX49458.1| 30S ribosomal protein S3 [Pasteurella dagmatis ATCC 43325]
Length = 235
Score = 271 bits (692), Expect = 7e-71, Method: Composition-based stats.
Identities = 113/225 (50%), Positives = 154/225 (68%), Gaps = 1/225 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ W+S WFA ++ L D K+R++L L A V++I IER
Sbjct: 1 MGQKVHPHGIRLGIVKPWSSTWFANTQDFADNLDGDFKVRKFLNKELANASVSRITIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVAAIAGVPAQINIAEVKKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY TA A T YG GIKV++ + E+ + I E + EK
Sbjct: 181 DIDYNTAEAHTTYGVIGIKVWIF-KGEILGGMAAIAQPEQQPAEK 224
>gi|169830442|ref|YP_001716424.1| ribosomal protein S3 [Candidatus Desulforudis audaxviator MP104C]
gi|226697697|sp|B1I1J4|RS3_DESAP RecName: Full=30S ribosomal protein S3
gi|169637286|gb|ACA58792.1| ribosomal protein S3 [Candidatus Desulforudis audaxviator MP104C]
Length = 218
Score = 271 bits (692), Expect = 7e-71, Method: Composition-based stats.
Identities = 97/211 (45%), Positives = 154/211 (72%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ W+++W+A ++ LL ED+KIR+Y++ L AG+++I IERT
Sbjct: 1 MGQKVDPRGLRLGIVRDWDAKWYAGKKDFSNLLLEDVKIRDYIKSKLLAAGISRIHIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
RI +++A+PG++IG+ GT++E +RK+L +T +I +++ E+ PE++A L+A+++
Sbjct: 61 ANRVRIAIHTAKPGVVIGRGGTEVEVLRKELEKLTGRQISINIVEIKTPELDAQLVAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+RRV FRRAMK+AV AM+ GA G+++ +GRL GAE++RTE Y EG+VPL TLRA
Sbjct: 121 AAQLQRRVAFRRAMKQAVGRAMKLGAKGIRISVAGRLAGAEIARTEWYSEGKVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYG + A+T YG G+KV++ + + +
Sbjct: 181 DIDYGFSEAKTTYGKIGVKVWIYRGEILPER 211
>gi|219871736|ref|YP_002476111.1| 30S ribosomal protein S3 [Haemophilus parasuis SH0165]
gi|219691940|gb|ACL33163.1| 30S ribosomal protein S3 [Haemophilus parasuis SH0165]
Length = 234
Score = 271 bits (692), Expect = 7e-71, Method: Composition-based stats.
Identities = 112/232 (48%), Positives = 154/232 (66%), Gaps = 6/232 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ W+S WFA ++ L D K+R++L L A V++I IER
Sbjct: 1 MGQKVHPHGIRLGIVKPWSSTWFANTQDFADNLEGDFKVRQFLNKELANASVSRITIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R +S + ++++EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVSKIAGVPAQINISEVKKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 AAQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE------VSDSDSTIPAAEHRVVEKD 226
IDY TA A T YG G+KV++ + V +S+ A + K
Sbjct: 181 DIDYNTAEAHTTYGVIGVKVWIFKGEILGGMAAVIESEKEPAAQPKKPARKG 232
>gi|160895846|ref|YP_001561428.1| 30S ribosomal protein S3 [Delftia acidovorans SPH-1]
gi|160361430|gb|ABX33043.1| ribosomal protein S3 [Delftia acidovorans SPH-1]
Length = 290
Score = 271 bits (692), Expect = 7e-71, Method: Composition-based stats.
Identities = 117/219 (53%), Positives = 159/219 (72%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V+ W SRW+A ++ +L ED+K+RE+L+ LK A V++ILIER
Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYASNRDFAGMLAEDIKVREFLKAKLKNAAVSRILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI ++SARPG++IGKKG DIE ++K+L+ + +++ EV KPEI+A LIA SI
Sbjct: 61 AKNARITIFSARPGVVIGKKGEDIENLKKELATRLGVPVAVNIEEVRKPEIDAKLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++R E Y EGRVPL TLRA
Sbjct: 121 CQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARCEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDYG + A+T YG G+KV+V D + +D
Sbjct: 181 DIDYGFSEAKTTYGVIGVKVWVYKGDTLGRNDLPAAETP 219
>gi|114319625|ref|YP_741308.1| 30S ribosomal protein S3 [Alkalilimnicola ehrlichii MLHE-1]
gi|122312451|sp|Q0ABG9|RS3_ALHEH RecName: Full=30S ribosomal protein S3
gi|114226019|gb|ABI55818.1| SSU ribosomal protein S3P [Alkalilimnicola ehrlichii MLHE-1]
Length = 226
Score = 271 bits (692), Expect = 7e-71, Method: Composition-based stats.
Identities = 108/219 (49%), Positives = 155/219 (70%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K++P FRLGV W S W+A S +G L+ DL++R +++ L A V++I IER
Sbjct: 1 MGHKVHPTGFRLGVTEDWRSMWYAGSSNFGEYLNTDLQVRNFIRKKLAHASVSRIRIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN + +++ARPG++IGKKG DI+++R +++ + +H+++ E+ KPE++A L+A+S+
Sbjct: 61 AKNALVTIHTARPGIVIGKKGEDIDRLRGEVARLMGVPVHINIEEIRKPELDAKLVAESV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERR++FRRAMKRAV +AMR GA G+KV SGRLNGAE++R+E Y EGRVPL TLRA
Sbjct: 121 AQQLERRIMFRRAMKRAVGNAMRLGAQGIKVHVSGRLNGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
+IDYG A A T YG G+KV+V + + E
Sbjct: 181 NIDYGVAEAHTTYGVIGVKVWVFKGEIIDSDAQPAAGGE 219
>gi|319942179|ref|ZP_08016495.1| 30S ribosomal protein S3 [Sutterella wadsworthensis 3_1_45B]
gi|319804232|gb|EFW01124.1| 30S ribosomal protein S3 [Sutterella wadsworthensis 3_1_45B]
Length = 260
Score = 271 bits (692), Expect = 8e-71, Method: Composition-based stats.
Identities = 114/213 (53%), Positives = 153/213 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRL V W SRW+A G +Y L EDLK+R +L L+ A VA++LIER
Sbjct: 1 MGQKINPTGFRLPVTRNWTSRWYANGRDYPNTLQEDLKVRSFLLKKLRNASVARVLIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
N RI ++++RPG++IGK+G DIE ++ ++ M +H+++ EV +PE++A LIA I
Sbjct: 61 ANNARITIFTSRPGIVIGKQGADIEALKTEVQKMMGVPVHVNIEEVRRPELDAQLIADGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLE+RV+FRRAMKRA+Q+AMR GA G+KV +SGRLNGA+++R E Y EGRVPLQTLRA
Sbjct: 121 TQQLEKRVMFRRAMKRAMQNAMRLGALGIKVQSSGRLNGADIARDEWYREGRVPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
+IDY T+ A T YG G+KV+V D +
Sbjct: 181 NIDYATSEAHTTYGVVGVKVWVYKGDNFGAEEP 213
>gi|159042844|ref|YP_001531638.1| 30S ribosomal protein S3 [Dinoroseobacter shibae DFL 12]
gi|189044976|sp|A8LM60|RS3_DINSH RecName: Full=30S ribosomal protein S3
gi|157910604|gb|ABV92037.1| ribosomal protein S3 RpsC [Dinoroseobacter shibae DFL 12]
Length = 240
Score = 271 bits (692), Expect = 8e-71, Method: Composition-based stats.
Identities = 126/225 (56%), Positives = 171/225 (76%), Gaps = 1/225 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+NPI RL VN TW+SRW+A +YG LL EDLKIRE+++ KQAG+++++IER
Sbjct: 1 MGNKVNPIGMRLQVNRTWDSRWYADTKDYGDLLLEDLKIREFIKEECKQAGISRVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +++ARPG+IIGKKG DIE +R+K++ MT+SE+HL++ EV KPE++A L+ +SI
Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIEGLRRKIAAMTDSELHLNIVEVRKPELDAALVGESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQ+A+R GA G++V +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVSFRRAMKRAVQNAVRMGAQGIRVNLAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
ID+ A TAYG GIKV++ + E+ + D H +++
Sbjct: 181 DIDFANVEATTAYGIIGIKVWIF-KGEIMEHDPQARDRRHAELQE 224
>gi|322515629|ref|ZP_08068607.1| 30S ribosomal protein S3 [Actinobacillus ureae ATCC 25976]
gi|322118280|gb|EFX90563.1| 30S ribosomal protein S3 [Actinobacillus ureae ATCC 25976]
Length = 234
Score = 270 bits (691), Expect = 8e-71, Method: Composition-based stats.
Identities = 111/224 (49%), Positives = 153/224 (68%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS WFA ++ L D K+R++L L A V++I IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTQDFADNLEGDFKVRKFLNKELANASVSRITIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R +S + +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVSQIAGVPAQINIAEVKKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
IDY TA A T YG G+KV++ + + + I + + V+
Sbjct: 181 DIDYNTAEAHTTYGVIGVKVWIFKGEILGGMAAVIESEQQPAVQ 224
>gi|197117329|ref|YP_002137756.1| 30S ribosomal protein S3 [Geobacter bemidjiensis Bem]
gi|322418370|ref|YP_004197593.1| 30S ribosomal protein S3 [Geobacter sp. M18]
gi|226697716|sp|B5EFQ6|RS3_GEOBB RecName: Full=30S ribosomal protein S3
gi|197086689|gb|ACH37960.1| ribosomal protein S3 [Geobacter bemidjiensis Bem]
gi|320124757|gb|ADW12317.1| ribosomal protein S3 [Geobacter sp. M18]
Length = 211
Score = 270 bits (691), Expect = 8e-71, Method: Composition-based stats.
Identities = 114/212 (53%), Positives = 161/212 (75%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI FRLGV TW+S+W+A +Y LLHEDLK+R +L+ L +GV+KI IER
Sbjct: 1 MGQKVNPIGFRLGVIKTWDSKWYAE-KDYAKLLHEDLKLRNFLKKRLYHSGVSKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I +++ARPGLIIGKKG+++E ++K+L+ +T+ E++L++ EV KPE++A L+A+++
Sbjct: 60 AGKAKINIFTARPGLIIGKKGSEVETLKKELAKLTDKEVYLNIQEVRKPELDAQLVAENV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR+ FRRAMK++V S ++FGA G+++ SGRL GAE+SRTE Y EGRVPL TLRA
Sbjct: 120 AMQLERRIAFRRAMKKSVTSTLKFGAKGIRITCSGRLGGAEMSRTEWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
IDYG A A+T YG G+KV + + +S
Sbjct: 180 DIDYGFAEAKTTYGIIGVKVLLFKGEVLSAKK 211
>gi|325577133|ref|ZP_08147617.1| 30S ribosomal protein S3 [Haemophilus parainfluenzae ATCC 33392]
gi|301155336|emb|CBW14802.1| 30S ribosomal subunit protein S3 [Haemophilus parainfluenzae T3T1]
gi|325160715|gb|EGC72836.1| 30S ribosomal protein S3 [Haemophilus parainfluenzae ATCC 33392]
Length = 235
Score = 270 bits (691), Expect = 8e-71, Method: Composition-based stats.
Identities = 114/225 (50%), Positives = 155/225 (68%), Gaps = 1/225 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP RLG+ WNS WFA ++ L D K+R++L L A V++I IER
Sbjct: 1 MGQKVNPNGIRLGIVKPWNSTWFANTQDFADNLDGDFKVRKFLTKELANASVSRITIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R +S + +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVSQIAGVPAQINIAEVKKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQSAMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQSAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY TA A T YG G+KV++ + E+ + + +E + +K
Sbjct: 181 DIDYNTAEAHTTYGVIGVKVWIF-KGEILGGMAAVAQSEQQPADK 224
>gi|296131842|ref|YP_003639089.1| ribosomal protein S3 [Thermincola sp. JR]
gi|296030420|gb|ADG81188.1| ribosomal protein S3 [Thermincola potens JR]
Length = 220
Score = 270 bits (691), Expect = 8e-71, Method: Composition-based stats.
Identities = 97/218 (44%), Positives = 153/218 (70%), Gaps = 1/218 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+G+ W+++W+A +Y L ED+K+REY++ L AG+++I IER
Sbjct: 1 MGQKVHPKGLRIGIIKDWDAKWYAE-KDYADFLLEDIKVREYVKKKLYAAGISRIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ +++A+PG++IG+ G+++E +RK L MT ++ +++ EV PE++A L+A++I
Sbjct: 60 ANRLKLTIHTAKPGIVIGRGGSEVEALRKSLEKMTGKQVSVNIVEVKVPELDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV FRRAMK+AV MR GA G+K+ SGRL GAE++RTE Y EG+VPL TLRA
Sbjct: 120 AAQLERRVSFRRAMKQAVSRTMRMGAQGIKIACSGRLAGAEMARTEWYSEGKVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
IDYG A A+T YG G+K ++ + + + +++ +
Sbjct: 180 DIDYGFAEADTTYGKIGVKAWIYRGEVLPEVKTSVASE 217
>gi|254438563|ref|ZP_05052057.1| ribosomal protein S3 [Octadecabacter antarcticus 307]
gi|254451173|ref|ZP_05064610.1| ribosomal protein S3 [Octadecabacter antarcticus 238]
gi|198254009|gb|EDY78323.1| ribosomal protein S3 [Octadecabacter antarcticus 307]
gi|198265579|gb|EDY89849.1| ribosomal protein S3 [Octadecabacter antarcticus 238]
Length = 238
Score = 270 bits (691), Expect = 8e-71, Method: Composition-based stats.
Identities = 126/225 (56%), Positives = 171/225 (76%), Gaps = 4/225 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+NPI RL VN TW+SRW+A +YG LL EDLKI+ +++ QAG+++++IER
Sbjct: 1 MGNKVNPIGMRLQVNRTWDSRWYADTKDYGNLLLEDLKIKAFIKKECAQAGISRVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +++ARPG+IIGKKG DIE +RKKL+ +T SE+HL++ EV KPE++A L+ +SI
Sbjct: 61 HKKCRVTIHTARPGVIIGKKGADIETLRKKLAALTASELHLNILEVRKPELDAQLVGESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
+QQLERRV FRRAMKRAVQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 SQQLERRVSFRRAMKRAVQNAMRMGALGIRVNLAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY A+TAYG GIK ++ + E+ + D P+A R +++
Sbjct: 181 DIDYAHVEAQTAYGIIGIKTWIF-KGEIMEHD---PSAHDRKLQE 221
>gi|311693277|gb|ADP96150.1| 30S ribosomal protein S3 [marine bacterium HP15]
Length = 227
Score = 270 bits (691), Expect = 9e-71, Method: Composition-based stats.
Identities = 107/213 (50%), Positives = 153/213 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+NP RLGV NS W+A EY L D+++RE+L L +A V+KI+IER
Sbjct: 1 MGHKVNPTGIRLGVIKEHNSVWYADKKEYSKNLLNDIQVREFLDKRLVKASVSKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+N RI +++ARPG++IGKKG D++++R+++S+M +H+++ EV KP+++A L+AQ++
Sbjct: 61 AQNARITIHTARPGIVIGKKGEDVDRLRREVSDMMGVPVHINIEEVRKPDLDARLVAQNV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+K+ GRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 AGQLERRVMFRRAMKRAVQNAMRQGAKGIKIQVGGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
IDY T A T YG G+KV++ + + +
Sbjct: 181 DIDYATYEAHTTYGVIGVKVWIFKGEILGGMEQ 213
>gi|317049834|ref|YP_004117482.1| 30S ribosomal protein S3 [Pantoea sp. At-9b]
gi|316951451|gb|ADU70926.1| ribosomal protein S3 [Pantoea sp. At-9b]
Length = 232
Score = 270 bits (691), Expect = 9e-71, Method: Composition-based stats.
Identities = 112/229 (48%), Positives = 157/229 (68%), Gaps = 3/229 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS WFA E+ L D K+R++L L +A V++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQFLTKELAKASVSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++N+ +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRTVVANIAGVPAQINIAEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS---DSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + + + PAA+ + ++
Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEPAAQPKKQQRK 229
>gi|251787977|ref|YP_003002698.1| 30S ribosomal protein S3 [Dickeya zeae Ech1591]
gi|271502240|ref|YP_003335266.1| 30S ribosomal protein S3 [Dickeya dadantii Ech586]
gi|307132833|ref|YP_003884849.1| 30S ribosomal subunit protein S3 [Dickeya dadantii 3937]
gi|247536598|gb|ACT05219.1| ribosomal protein S3 [Dickeya zeae Ech1591]
gi|270345795|gb|ACZ78560.1| ribosomal protein S3 [Dickeya dadantii Ech586]
gi|306530362|gb|ADN00293.1| 30S ribosomal subunit protein S3 [Dickeya dadantii 3937]
Length = 233
Score = 270 bits (691), Expect = 9e-71, Method: Composition-based stats.
Identities = 113/230 (49%), Positives = 159/230 (69%), Gaps = 4/230 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ TWNS W+A E+ L D K+R+YL L++A V++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKTWNSTWYANTKEFADNLDSDFKVRQYLNKELEKASVSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKGVADIAGVPAQINIAEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + + PAA+ + ++
Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRK 230
>gi|15603274|ref|NP_246348.1| 30S ribosomal protein S3 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|27734533|sp|Q9CL37|RS3_PASMU RecName: Full=30S ribosomal protein S3
gi|12721784|gb|AAK03493.1| RpS3 [Pasteurella multocida subsp. multocida str. Pm70]
Length = 235
Score = 270 bits (691), Expect = 9e-71, Method: Composition-based stats.
Identities = 112/225 (49%), Positives = 154/225 (68%), Gaps = 1/225 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ W+S WFA ++ L D K+R++L L A V++I IER
Sbjct: 1 MGQKVHPHGIRLGIVKPWSSTWFANTQDFADNLDGDFKVRKFLNKELANASVSRITIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVAAIAGVPAQINIAEVKKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY TA A T YG GIKV++ + E+ + I E + +K
Sbjct: 181 DIDYNTAEAHTTYGVIGIKVWIF-KGEILGGMAAIAQPEQQPADK 224
>gi|300718699|ref|YP_003743502.1| 30S ribosomal protein S3 [Erwinia billingiae Eb661]
gi|299064535|emb|CAX61655.1| 30S ribosomal protein S3 [Erwinia billingiae Eb661]
Length = 232
Score = 270 bits (691), Expect = 9e-71, Method: Composition-based stats.
Identities = 113/230 (49%), Positives = 159/230 (69%), Gaps = 3/230 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS WFA E+ L D K+R++L L +A V++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKAWNSTWFANTKEFADNLDSDFKVRQFLTKELAKASVSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS---DSTIPAAEHRVVEKDS 227
IDY T+ A T YG G+KV++ + + + PAA+ + ++ S
Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEPAAQPKKQQRKS 230
>gi|311277731|ref|YP_003939962.1| ribosomal protein S3 [Enterobacter cloacae SCF1]
gi|308746926|gb|ADO46678.1| ribosomal protein S3 [Enterobacter cloacae SCF1]
Length = 232
Score = 270 bits (691), Expect = 9e-71, Method: Composition-based stats.
Identities = 113/229 (49%), Positives = 158/229 (68%), Gaps = 3/229 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS WFA E+ L D K+R+YL L +A V++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS---DSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + + + PAA+ + ++
Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEPAAQPKKQQRK 229
>gi|291619169|ref|YP_003521911.1| RpsC [Pantoea ananatis LMG 20103]
gi|291154199|gb|ADD78783.1| RpsC [Pantoea ananatis LMG 20103]
gi|327395499|dbj|BAK12921.1| 30S ribosomal protein S3 RpsC [Pantoea ananatis AJ13355]
Length = 232
Score = 270 bits (691), Expect = 9e-71, Method: Composition-based stats.
Identities = 112/229 (48%), Positives = 156/229 (68%), Gaps = 3/229 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS WFA E+ L D K+R+YL L +A V++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRTVVAKIAGVPAQINIAEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS---DSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + + + PAA+ + ++
Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEPAAQPKKQQRK 229
>gi|33594485|ref|NP_882129.1| 30S ribosomal protein S3 [Bordetella pertussis Tohama I]
gi|33594757|ref|NP_882400.1| 30S ribosomal protein S3 [Bordetella parapertussis 12822]
gi|33599028|ref|NP_886588.1| 30S ribosomal protein S3 [Bordetella bronchiseptica RB50]
gi|61215724|sp|Q7VTC7|RS3_BORPE RecName: Full=30S ribosomal protein S3
gi|61215729|sp|Q7W2F0|RS3_BORPA RecName: Full=30S ribosomal protein S3
gi|61215738|sp|Q7WRB9|RS3_BORBR RecName: Full=30S ribosomal protein S3
gi|33564561|emb|CAE43877.1| 30S ribosomal protein S3 [Bordetella pertussis Tohama I]
gi|33564833|emb|CAE39776.1| 30S ribosomal protein S3 [Bordetella parapertussis]
gi|33575074|emb|CAE30537.1| 30S ribosomal protein S3 [Bordetella bronchiseptica RB50]
Length = 263
Score = 270 bits (691), Expect = 9e-71, Method: Composition-based stats.
Identities = 119/218 (54%), Positives = 161/218 (73%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V W SRWFA +G +L ED+++REYL+ LK A V +++IER
Sbjct: 1 MGQKIHPTGFRLAVTRNWTSRWFADDKAFGTMLAEDIRVREYLKKKLKSASVGRVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI VYSARPG++IGK+G DIE ++ L + +H+++ E+ KPE +A LIA SI
Sbjct: 61 AKNARITVYSARPGVVIGKRGEDIENLKADLQRLMGVPVHVNIEEIRKPETDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
+QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TL+A
Sbjct: 121 SQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLKA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
+IDYGT+ A T YG GIKV+V D +++ + AA
Sbjct: 181 NIDYGTSEAHTTYGVIGIKVWVYKGDMLANGELPPEAA 218
>gi|87199276|ref|YP_496533.1| 30S ribosomal protein S3 [Novosphingobium aromaticivorans DSM
12444]
gi|123749869|sp|Q2G8X4|RS3_NOVAD RecName: Full=30S ribosomal protein S3
gi|87134957|gb|ABD25699.1| SSU ribosomal protein S3P [Novosphingobium aromaticivorans DSM
12444]
Length = 231
Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats.
Identities = 125/225 (55%), Positives = 166/225 (73%), Gaps = 4/225 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K NPI RL +N TW+SRW+A G Y +L EDLKIR+Y+ +L QA ++K++IER
Sbjct: 1 MGHKSNPIGLRLQINRTWDSRWYAEGRNYAQMLEEDLKIRKYIVENLPQAAISKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K CR+ +Y+ARPG+IIGKKG DIEK+R KL+ MT S++ L++ E+ KPEI++ L+AQ +
Sbjct: 61 AKLCRVSIYAARPGVIIGKKGADIEKLRSKLATMTGSDVKLNIVEIRKPEIDSKLVAQGV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL RRV FRRAMKRAVQSA+R GA+G+K+ GRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 ADQLVRRVAFRRAMKRAVQSALRLGAEGIKITCGGRLGGAEIARVEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
+IDY A A TAYG GIKV++ + E+ D P A+ R++ +
Sbjct: 181 NIDYAEAEAHTAYGVIGIKVWIF-KGEILGHD---PMAQDRLMME 221
>gi|156932240|ref|YP_001436156.1| 30S ribosomal protein S3 [Cronobacter sakazakii ATCC BAA-894]
gi|260599633|ref|YP_003212204.1| 30S ribosomal protein S3 [Cronobacter turicensis z3032]
gi|189044981|sp|A7MPI5|RS3_ENTS8 RecName: Full=30S ribosomal protein S3
gi|156530494|gb|ABU75320.1| hypothetical protein ESA_00011 [Cronobacter sakazakii ATCC BAA-894]
gi|260218810|emb|CBA34161.1| 30S ribosomal protein S3 [Cronobacter turicensis z3032]
Length = 233
Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats.
Identities = 113/230 (49%), Positives = 157/230 (68%), Gaps = 4/230 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS WFA E+ L D K+R+YL L +A V++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLNKELAKASVSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKGVADIAGVPAQINIAEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + + PAA+ + ++
Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRK 230
>gi|138893791|ref|YP_001124244.1| 30S ribosomal protein S3 [Geobacillus thermodenitrificans NG80-2]
gi|196251018|ref|ZP_03149700.1| ribosomal protein S3 [Geobacillus sp. G11MC16]
gi|152060863|sp|A4IJJ5|RS3_GEOTN RecName: Full=30S ribosomal protein S3
gi|134265304|gb|ABO65499.1| Ribosomal protein S3 [Geobacillus thermodenitrificans NG80-2]
gi|196209490|gb|EDY04267.1| ribosomal protein S3 [Geobacillus sp. G11MC16]
Length = 218
Score = 270 bits (691), Expect = 1e-70, Method: Composition-based stats.
Identities = 101/219 (46%), Positives = 152/219 (69%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI R+G+ W SRW+A +Y LLHEDLK+REY+ L+ A V+++ IER
Sbjct: 1 MGQKVNPIGLRIGIIRDWESRWYAE-KDYADLLHEDLKVREYINKRLQDAAVSRVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G+++E +RK L+ +T +H+++ E+ KP+++A L+A++I
Sbjct: 60 ANRVNVTIHTAKPGMVIGKGGSEVEALRKALAQLTGKRVHINIVEIKKPDLDAKLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRA K+A+Q AMR GA G+K + SGRL GA+++R+E Y EG VPL TLRA
Sbjct: 120 ARQLENRVSFRRAQKQAIQRAMRAGAKGIKTMVSGRLGGADIARSEHYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDY TA A+T YG G+KV++ + + +
Sbjct: 180 DIDYATAEADTTYGKIGVKVWIYRGEVLPTKKKAEEGGK 218
>gi|254483419|ref|ZP_05096648.1| ribosomal protein S3 [marine gamma proteobacterium HTCC2148]
gi|214036293|gb|EEB76971.1| ribosomal protein S3 [marine gamma proteobacterium HTCC2148]
Length = 223
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 104/219 (47%), Positives = 152/219 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI RLG+ NS W+A Y L DL++REY++ L+ A V++I+IER
Sbjct: 1 MGQKVHPIGIRLGIVKEHNSIWYADSKNYAKQLINDLQVREYIEKALEHASVSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ RI +++ARPG++IGKKG D++ +RK L+ +H+++ E+ KP+++A L+AQ++
Sbjct: 61 AQTARITIHTARPGIVIGKKGEDVDALRKILTEKMGVPVHINIEEIRKPDLDAKLVAQNV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV+FRRAMKR VQ+AMR GA G+K+ GRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVMFRRAMKRVVQNAMRQGAQGIKIQVGGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDY T A T YG G+KV++ + + ++ +
Sbjct: 181 DIDYATYEAATTYGIIGVKVWIFKGEVIGADEAAEAPKK 219
>gi|322831078|ref|YP_004211105.1| ribosomal protein S3 [Rahnella sp. Y9602]
gi|321166279|gb|ADW71978.1| ribosomal protein S3 [Rahnella sp. Y9602]
Length = 232
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 110/229 (48%), Positives = 158/229 (68%), Gaps = 3/229 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS W+A ++ L D K+R++L L +A V++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWYANTKDFADNLDGDFKVRQFLTKELAKASVSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS---DSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + + + PAA+ + ++
Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEPAAQPKKQQRK 229
>gi|152972221|ref|YP_001337367.1| 30S ribosomal protein S3 [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|188535272|ref|YP_001909069.1| 30S ribosomal protein S3 [Erwinia tasmaniensis Et1/99]
gi|206580744|ref|YP_002236287.1| ribosomal protein S3 [Klebsiella pneumoniae 342]
gi|238896810|ref|YP_002921555.1| 30S ribosomal protein S3 [Klebsiella pneumoniae NTUH-K2044]
gi|259909993|ref|YP_002650349.1| 30S ribosomal protein S3 [Erwinia pyrifoliae Ep1/96]
gi|262045171|ref|ZP_06018198.1| 30S ribosomal protein S3 [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|288933272|ref|YP_003437331.1| ribosomal protein S3 [Klebsiella variicola At-22]
gi|290512075|ref|ZP_06551443.1| 30S ribosomal protein S3 [Klebsiella sp. 1_1_55]
gi|292489843|ref|YP_003532733.1| 30S ribosomal protein S3 [Erwinia amylovora CFBP1430]
gi|292900885|ref|YP_003540254.1| 30S ribosomal protein S3 [Erwinia amylovora ATCC 49946]
gi|330002288|ref|ZP_08304282.1| ribosomal protein S3 [Klebsiella sp. MS 92-3]
gi|189045015|sp|A6TEW6|RS3_KLEP7 RecName: Full=30S ribosomal protein S3
gi|226697710|sp|B2VK58|RS3_ERWT9 RecName: Full=30S ribosomal protein S3
gi|226697722|sp|B5XNA0|RS3_KLEP3 RecName: Full=30S ribosomal protein S3
gi|150957070|gb|ABR79100.1| 30S ribosomal protein S3 [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|188030314|emb|CAO98203.1| 30S ribosomal protein S3 [Erwinia tasmaniensis Et1/99]
gi|206569802|gb|ACI11578.1| ribosomal protein S3 [Klebsiella pneumoniae 342]
gi|224965615|emb|CAX57147.1| 30S ribosomal protein S3 [Erwinia pyrifoliae Ep1/96]
gi|238549137|dbj|BAH65488.1| 30S ribosomal protein S3 [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|259037491|gb|EEW38735.1| 30S ribosomal protein S3 [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|283480090|emb|CAY76006.1| 30S ribosomal protein S3 [Erwinia pyrifoliae DSM 12163]
gi|288888001|gb|ADC56319.1| ribosomal protein S3 [Klebsiella variicola At-22]
gi|289775865|gb|EFD83865.1| 30S ribosomal protein S3 [Klebsiella sp. 1_1_55]
gi|291200733|emb|CBJ47866.1| 30S ribosomal protein S3 [Erwinia amylovora ATCC 49946]
gi|291555280|emb|CBA23577.1| 30S ribosomal protein S3 [Erwinia amylovora CFBP1430]
gi|310765592|gb|ADP10542.1| 30S ribosomal protein S3 [Erwinia sp. Ejp617]
gi|312174025|emb|CBX82278.1| 30S ribosomal protein S3 [Erwinia amylovora ATCC BAA-2158]
gi|328537361|gb|EGF63611.1| ribosomal protein S3 [Klebsiella sp. MS 92-3]
Length = 232
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 112/229 (48%), Positives = 158/229 (68%), Gaps = 3/229 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS WFA E+ L D K+R++L L +A V++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQFLTKELAKASVSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS---DSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + + + PAA+ + ++
Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEPAAQPKKQQRK 229
>gi|167854927|ref|ZP_02477703.1| 30S ribosomal protein S3 [Haemophilus parasuis 29755]
gi|167853994|gb|EDS25232.1| 30S ribosomal protein S3 [Haemophilus parasuis 29755]
Length = 234
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 112/232 (48%), Positives = 154/232 (66%), Gaps = 6/232 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ W+S WFA ++ L D K+R++L L A V++I IER
Sbjct: 1 MGQKVHPHGIRLGIVKPWSSTWFANTQDFADNLGGDFKVRQFLNKELANASVSRITIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R +S + ++++EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVSKIAGVPAQINISEVKKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 AAQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE------VSDSDSTIPAAEHRVVEKD 226
IDY TA A T YG G+KV++ + V +S+ A + K
Sbjct: 181 DIDYNTAEAHTTYGVIGVKVWIFKGEILGGMAAVIESEKEPAAQPKKPARKG 232
>gi|227115266|ref|ZP_03828922.1| 30S ribosomal protein S3 [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
gi|227328943|ref|ZP_03832967.1| 30S ribosomal protein S3 [Pectobacterium carotovorum subsp.
carotovorum WPP14]
gi|253690177|ref|YP_003019367.1| ribosomal protein S3 [Pectobacterium carotovorum subsp. carotovorum
PC1]
gi|261823226|ref|YP_003261332.1| 30S ribosomal protein S3 [Pectobacterium wasabiae WPP163]
gi|259495254|sp|C6DG68|RS3_PECCP RecName: Full=30S ribosomal protein S3
gi|251756755|gb|ACT14831.1| ribosomal protein S3 [Pectobacterium carotovorum subsp. carotovorum
PC1]
gi|261607239|gb|ACX89725.1| ribosomal protein S3 [Pectobacterium wasabiae WPP163]
Length = 233
Score = 270 bits (690), Expect = 1e-70, Method: Composition-based stats.
Identities = 112/230 (48%), Positives = 158/230 (68%), Gaps = 4/230 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS W+A E+ L D K+R+YL L++A V++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWYANTKEFADNLDSDFKVRKYLTKELEKASVSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + + PAA+ + ++
Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRK 230
>gi|293393305|ref|ZP_06637619.1| 30S ribosomal protein S3 [Serratia odorifera DSM 4582]
gi|291424215|gb|EFE97430.1| 30S ribosomal protein S3 [Serratia odorifera DSM 4582]
Length = 232
Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats.
Identities = 111/229 (48%), Positives = 158/229 (68%), Gaps = 3/229 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS W+A E+ L D K+R++L L +A V++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWYANTKEFADNLDSDFKVRQFLTKELAKASVSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS---DSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + + + PAA+ + ++
Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEPAAQPKKQQRK 229
>gi|82701906|ref|YP_411472.1| 30S ribosomal protein S3 [Nitrosospira multiformis ATCC 25196]
gi|91207822|sp|Q2YAZ1|RS3_NITMU RecName: Full=30S ribosomal protein S3
gi|82409971|gb|ABB74080.1| SSU ribosomal protein S3P [Nitrosospira multiformis ATCC 25196]
Length = 286
Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats.
Identities = 114/214 (53%), Positives = 158/214 (73%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V W+S+W+A G + +L+ED+K+REYL+ L A V +++IER
Sbjct: 1 MGQKIHPTGFRLSVLKNWSSKWYANGKSFPGMLNEDIKVREYLKKKLAHASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI +YS+RPG++IGKKG DIE +R L + +H+++ E+ KPEI+A LIA +I
Sbjct: 61 SKNARITIYSSRPGVVIGKKGEDIEVLRGALQKLMGVPVHVNIEEIRKPEIDAQLIADNI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
+DYG + A+T YG GIKV+V + + +
Sbjct: 181 DLDYGVSEAKTTYGVIGIKVWVFKGEVIGRGEQA 214
>gi|15833433|ref|NP_312206.1| 30S ribosomal protein S3 [Escherichia coli O157:H7 str. Sakai]
gi|16131193|ref|NP_417773.1| 30S ribosomal subunit protein S3 [Escherichia coli str. K-12
substr. MG1655]
gi|16762849|ref|NP_458466.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|16766723|ref|NP_462338.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|26249904|ref|NP_755944.1| 30S ribosomal protein S3 [Escherichia coli CFT073]
gi|29144336|ref|NP_807678.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|30065385|ref|NP_839556.1| 30S ribosomal protein S3 [Shigella flexneri 2a str. 2457T]
gi|56415353|ref|YP_152428.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|62181938|ref|YP_218355.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|74313833|ref|YP_312252.1| 30S ribosomal protein S3 [Shigella sonnei Ss046]
gi|82545677|ref|YP_409624.1| 30S ribosomal protein S3 [Shigella boydii Sb227]
gi|82778610|ref|YP_404959.1| 30S ribosomal protein S3 [Shigella dysenteriae Sd197]
gi|89110696|ref|AP_004476.1| 30S ribosomal subunit protein S3 [Escherichia coli str. K-12
substr. W3110]
gi|91212747|ref|YP_542733.1| 30S ribosomal protein S3 [Escherichia coli UTI89]
gi|110643553|ref|YP_671283.1| 30S ribosomal protein S3 [Escherichia coli 536]
gi|110807162|ref|YP_690682.1| 30S ribosomal protein S3 [Shigella flexneri 5 str. 8401]
gi|117625593|ref|YP_858916.1| 30S ribosomal protein S3 [Escherichia coli APEC O1]
gi|146313379|ref|YP_001178453.1| 30S ribosomal protein S3 [Enterobacter sp. 638]
gi|157148891|ref|YP_001456209.1| 30S ribosomal protein S3 [Citrobacter koseri ATCC BAA-895]
gi|157157923|ref|YP_001464782.1| 30S ribosomal protein S3 [Escherichia coli E24377A]
gi|157162788|ref|YP_001460106.1| 30S ribosomal protein S3 [Escherichia coli HS]
gi|161506014|ref|YP_001573126.1| 30S ribosomal protein S3 [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|161616460|ref|YP_001590425.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|168468007|ref|ZP_02701844.1| ribosomal protein S3 [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|168753080|ref|ZP_02778087.1| ribosomal protein S3 [Escherichia coli O157:H7 str. EC4401]
gi|168769178|ref|ZP_02794185.1| ribosomal protein S3 [Escherichia coli O157:H7 str. EC4486]
gi|168784357|ref|ZP_02809364.1| ribosomal protein S3 [Escherichia coli O157:H7 str. EC4076]
gi|170018450|ref|YP_001723404.1| 30S ribosomal protein S3 [Escherichia coli ATCC 8739]
gi|170683377|ref|YP_001745576.1| 30S ribosomal protein S3 [Escherichia coli SMS-3-5]
gi|170769550|ref|ZP_02904003.1| ribosomal protein S3 [Escherichia albertii TW07627]
gi|187732278|ref|YP_001881998.1| 30S ribosomal protein S3 [Shigella boydii CDC 3083-94]
gi|188492004|ref|ZP_02999274.1| ribosomal protein S3 [Escherichia coli 53638]
gi|191174669|ref|ZP_03036144.1| ribosomal protein S3 [Escherichia coli F11]
gi|194445051|ref|YP_002042684.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194451812|ref|YP_002047457.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194737846|ref|YP_002116376.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195939863|ref|ZP_03085245.1| 30S ribosomal protein S3 [Escherichia coli O157:H7 str. EC4024]
gi|197249433|ref|YP_002148353.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197264520|ref|ZP_03164594.1| ribosomal protein S3 [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197364283|ref|YP_002143920.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|198242497|ref|YP_002217396.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200388649|ref|ZP_03215261.1| ribosomal protein S3 [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|205354938|ref|YP_002228739.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207858676|ref|YP_002245327.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|208806555|ref|ZP_03248892.1| ribosomal protein S3 [Escherichia coli O157:H7 str. EC4206]
gi|208811995|ref|ZP_03253324.1| ribosomal protein S3 [Escherichia coli O157:H7 str. EC4045]
gi|208821473|ref|ZP_03261793.1| ribosomal protein S3 [Escherichia coli O157:H7 str. EC4042]
gi|209400495|ref|YP_002272770.1| ribosomal protein S3 [Escherichia coli O157:H7 str. EC4115]
gi|209920780|ref|YP_002294864.1| 30S ribosomal protein S3 [Escherichia coli SE11]
gi|213161928|ref|ZP_03347638.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213417257|ref|ZP_03350401.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
gi|213425756|ref|ZP_03358506.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213581214|ref|ZP_03363040.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
gi|213612415|ref|ZP_03370241.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
gi|213646530|ref|ZP_03376583.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|215488614|ref|YP_002331045.1| 30S ribosomal protein S3 [Escherichia coli O127:H6 str. E2348/69]
gi|217324648|ref|ZP_03440732.1| ribosomal protein S3 [Escherichia coli O157:H7 str. TW14588]
gi|218550589|ref|YP_002384380.1| 30S ribosomal protein S3 [Escherichia fergusonii ATCC 35469]
gi|218555871|ref|YP_002388784.1| 30S ribosomal protein S3 [Escherichia coli IAI1]
gi|218560375|ref|YP_002393288.1| 30S ribosomal protein S3 [Escherichia coli S88]
gi|218691600|ref|YP_002399812.1| 30S ribosomal protein S3 [Escherichia coli ED1a]
gi|218697006|ref|YP_002404673.1| 30S ribosomal protein S3 [Escherichia coli 55989]
gi|218702076|ref|YP_002409705.1| 30S ribosomal protein S3 [Escherichia coli IAI39]
gi|218706921|ref|YP_002414440.1| 30S ribosomal protein S3 [Escherichia coli UMN026]
gi|224585229|ref|YP_002639028.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|227883445|ref|ZP_04001250.1| 30S ribosomal protein S3 [Escherichia coli 83972]
gi|237703044|ref|ZP_04533525.1| 30S ribosomal subunit protein S3 [Escherichia sp. 3_2_53FAA]
gi|237728649|ref|ZP_04559130.1| 30S ribosomal protein S3 [Citrobacter sp. 30_2]
gi|238902405|ref|YP_002928201.1| 30S ribosomal subunit protein S3 [Escherichia coli BW2952]
gi|238913851|ref|ZP_04657688.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|253771862|ref|YP_003034693.1| 30S ribosomal protein S3 [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254038475|ref|ZP_04872531.1| 30S ribosomal subunit protein S3 [Escherichia sp. 1_1_43]
gi|254163242|ref|YP_003046350.1| 30S ribosomal protein S3 [Escherichia coli B str. REL606]
gi|254795251|ref|YP_003080088.1| 30S ribosomal protein S3 [Escherichia coli O157:H7 str. TW14359]
gi|256020673|ref|ZP_05434538.1| 30S ribosomal protein S3 [Shigella sp. D9]
gi|256025958|ref|ZP_05439823.1| 30S ribosomal protein S3 [Escherichia sp. 4_1_40B]
gi|260846112|ref|YP_003223890.1| 30S ribosomal subunit protein S3 [Escherichia coli O103:H2 str.
12009]
gi|260857435|ref|YP_003231326.1| 30S ribosomal subunit protein S3 [Escherichia coli O26:H11 str.
11368]
gi|260870057|ref|YP_003236459.1| 30S ribosomal subunit protein S3 [Escherichia coli O111:H- str.
11128]
gi|261224619|ref|ZP_05938900.1| 30S ribosomal subunit protein S3 [Escherichia coli O157:H7 str.
FRIK2000]
gi|261254487|ref|ZP_05947020.1| 30S ribosomal subunit protein S3 [Escherichia coli O157:H7 str.
FRIK966]
gi|261342784|ref|ZP_05970642.1| ribosomal protein S3 [Enterobacter cancerogenus ATCC 35316]
gi|283788050|ref|YP_003367915.1| 30S ribosomal subunit protein S3 [Citrobacter rodentium ICC168]
gi|283835731|ref|ZP_06355472.1| hypothetical protein CIT292_10123 [Citrobacter youngae ATCC 29220]
gi|291284672|ref|YP_003501490.1| 30S ribosomal protein S3 [Escherichia coli O55:H7 str. CB9615]
gi|293406911|ref|ZP_06650835.1| 30S ribosomal protein S3 [Escherichia coli FVEC1412]
gi|293412733|ref|ZP_06655401.1| 30S ribosomal protein S3 [Escherichia coli B354]
gi|293416731|ref|ZP_06659368.1| 30S ribosomal protein S3 [Escherichia coli B185]
gi|293453632|ref|ZP_06664051.1| 30S ribosomal protein S3 [Escherichia coli B088]
gi|296105022|ref|YP_003615168.1| 30S ribosomal protein S3 [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|297516602|ref|ZP_06934988.1| 30S ribosomal protein S3 [Escherichia coli OP50]
gi|298382651|ref|ZP_06992246.1| 30S ribosomal protein S3 [Escherichia coli FVEC1302]
gi|300815476|ref|ZP_07095701.1| ribosomal protein S3 [Escherichia coli MS 107-1]
gi|300822883|ref|ZP_07103019.1| ribosomal protein S3 [Escherichia coli MS 119-7]
gi|300896662|ref|ZP_07115178.1| ribosomal protein S3 [Escherichia coli MS 198-1]
gi|300903562|ref|ZP_07121484.1| ribosomal protein S3 [Escherichia coli MS 84-1]
gi|300918287|ref|ZP_07134891.1| ribosomal protein S3 [Escherichia coli MS 115-1]
gi|300921877|ref|ZP_07138033.1| ribosomal protein S3 [Escherichia coli MS 182-1]
gi|300932207|ref|ZP_07147486.1| ribosomal protein S3 [Escherichia coli MS 187-1]
gi|300935312|ref|ZP_07150322.1| ribosomal protein S3 [Escherichia coli MS 21-1]
gi|300946536|ref|ZP_07160801.1| ribosomal protein S3 [Escherichia coli MS 116-1]
gi|300954811|ref|ZP_07167238.1| ribosomal protein S3 [Escherichia coli MS 175-1]
gi|300973993|ref|ZP_07172400.1| ribosomal protein S3 [Escherichia coli MS 200-1]
gi|300979885|ref|ZP_07174761.1| ribosomal protein S3 [Escherichia coli MS 45-1]
gi|301018822|ref|ZP_07183066.1| ribosomal protein S3 [Escherichia coli MS 69-1]
gi|301021136|ref|ZP_07185176.1| ribosomal protein S3 [Escherichia coli MS 196-1]
gi|301046085|ref|ZP_07193263.1| ribosomal protein S3 [Escherichia coli MS 185-1]
gi|301305523|ref|ZP_07211615.1| ribosomal protein S3 [Escherichia coli MS 124-1]
gi|301325119|ref|ZP_07218653.1| ribosomal protein S3 [Escherichia coli MS 78-1]
gi|301643866|ref|ZP_07243897.1| ribosomal protein S3 [Escherichia coli MS 146-1]
gi|306816343|ref|ZP_07450481.1| 30S ribosomal protein S3 [Escherichia coli NC101]
gi|307139997|ref|ZP_07499353.1| 30S ribosomal protein S3 [Escherichia coli H736]
gi|307315107|ref|ZP_07594690.1| ribosomal protein S3 [Escherichia coli W]
gi|309785636|ref|ZP_07680267.1| ribosomal protein S3 [Shigella dysenteriae 1617]
gi|309794589|ref|ZP_07689011.1| ribosomal protein S3 [Escherichia coli MS 145-7]
gi|312968361|ref|ZP_07782571.1| ribosomal protein S3 [Escherichia coli 2362-75]
gi|312972425|ref|ZP_07786599.1| ribosomal protein S3 [Escherichia coli 1827-70]
gi|331644010|ref|ZP_08345139.1| ribosomal protein S3 [Escherichia coli H736]
gi|331649111|ref|ZP_08350197.1| ribosomal protein S3 [Escherichia coli M605]
gi|331654907|ref|ZP_08355906.1| ribosomal protein S3 [Escherichia coli M718]
gi|331659604|ref|ZP_08360542.1| ribosomal protein S3 [Escherichia coli TA206]
gi|331664927|ref|ZP_08365828.1| ribosomal protein S3 [Escherichia coli TA143]
gi|331670143|ref|ZP_08370982.1| ribosomal protein S3 [Escherichia coli TA271]
gi|331674817|ref|ZP_08375574.1| ribosomal protein S3 [Escherichia coli TA280]
gi|331679383|ref|ZP_08380053.1| ribosomal protein S3 [Escherichia coli H591]
gi|331684956|ref|ZP_08385542.1| ribosomal protein S3 [Escherichia coli H299]
gi|62287194|sp|Q5PIV8|RS3_SALPA RecName: Full=30S ribosomal protein S3
gi|62288973|sp|P0A7V3|RS3_ECOLI RecName: Full=30S ribosomal protein S3
gi|62288974|sp|P0A7V4|RS3_ECOL6 RecName: Full=30S ribosomal protein S3
gi|62288975|sp|P0A7V5|RS3_ECO57 RecName: Full=30S ribosomal protein S3
gi|62288976|sp|P0A7V6|RS3_SALTY RecName: Full=30S ribosomal protein S3
gi|62288977|sp|P0A7V7|RS3_SALTI RecName: Full=30S ribosomal protein S3
gi|75505516|sp|Q57J38|RS3_SALCH RecName: Full=30S ribosomal protein S3
gi|91207838|sp|Q31VW2|RS3_SHIBS RecName: Full=30S ribosomal protein S3
gi|91207839|sp|Q32B37|RS3_SHIDS RecName: Full=30S ribosomal protein S3
gi|91207840|sp|Q3YWU5|RS3_SHISS RecName: Full=30S ribosomal protein S3
gi|122366320|sp|Q0SZY8|RS3_SHIF8 RecName: Full=30S ribosomal protein S3
gi|122957942|sp|Q0TCE7|RS3_ECOL5 RecName: Full=30S ribosomal protein S3
gi|122990715|sp|Q1R612|RS3_ECOUT RecName: Full=30S ribosomal protein S3
gi|152060860|sp|A1AGK2|RS3_ECOK1 RecName: Full=30S ribosomal protein S3
gi|189044965|sp|A8AQL0|RS3_CITK8 RecName: Full=30S ribosomal protein S3
gi|189044977|sp|A7ZSK3|RS3_ECO24 RecName: Full=30S ribosomal protein S3
gi|189044978|sp|A8A5B9|RS3_ECOHS RecName: Full=30S ribosomal protein S3
gi|189044979|sp|B1IPY5|RS3_ECOLC RecName: Full=30S ribosomal protein S3
gi|189044980|sp|A4WFC2|RS3_ENT38 RecName: Full=30S ribosomal protein S3
gi|189045331|sp|A9MN54|RS3_SALAR RecName: Full=30S ribosomal protein S3
gi|189045332|sp|A9MSZ2|RS3_SALPB RecName: Full=30S ribosomal protein S3
gi|226697702|sp|B7MCS9|RS3_ECO45 RecName: Full=30S ribosomal protein S3
gi|226697703|sp|B5YTN5|RS3_ECO5E RecName: Full=30S ribosomal protein S3
gi|226697704|sp|B7NLN3|RS3_ECO7I RecName: Full=30S ribosomal protein S3
gi|226697705|sp|B7M1M8|RS3_ECO8A RecName: Full=30S ribosomal protein S3
gi|226697706|sp|B7NDT5|RS3_ECOLU RecName: Full=30S ribosomal protein S3
gi|226697707|sp|B6I228|RS3_ECOSE RecName: Full=30S ribosomal protein S3
gi|226697708|sp|B1LHC8|RS3_ECOSM RecName: Full=30S ribosomal protein S3
gi|226697711|sp|B7LRT0|RS3_ESCF3 RecName: Full=30S ribosomal protein S3
gi|226697752|sp|B5F7T9|RS3_SALA4 RecName: Full=30S ribosomal protein S3
gi|226697753|sp|B5FJK8|RS3_SALDC RecName: Full=30S ribosomal protein S3
gi|226697754|sp|B5R285|RS3_SALEP RecName: Full=30S ribosomal protein S3
gi|226697755|sp|B5RH21|RS3_SALG2 RecName: Full=30S ribosomal protein S3
gi|226697756|sp|B4TKK9|RS3_SALHS RecName: Full=30S ribosomal protein S3
gi|226697757|sp|B4SUT4|RS3_SALNS RecName: Full=30S ribosomal protein S3
gi|226697758|sp|B5BGY0|RS3_SALPK RecName: Full=30S ribosomal protein S3
gi|226697759|sp|B4TXD6|RS3_SALSV RecName: Full=30S ribosomal protein S3
gi|226697760|sp|B2U2T2|RS3_SHIB3 RecName: Full=30S ribosomal protein S3
gi|254764529|sp|B7UK38|RS3_ECO27 RecName: Full=30S ribosomal protein S3
gi|254764530|sp|B7L4K3|RS3_ECO55 RecName: Full=30S ribosomal protein S3
gi|254764531|sp|B7N198|RS3_ECO81 RecName: Full=30S ribosomal protein S3
gi|254764544|sp|C0Q0B0|RS3_SALPC RecName: Full=30S ribosomal protein S3
gi|259495244|sp|C4ZUG9|RS3_ECOBW RecName: Full=30S ribosomal protein S3
gi|25294476|pir||AG1006 30S ribosomal chain protein S3 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|116666550|pdb|1VS5|C Chain C, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With The Antibiotic
Kasugamyin At 3.5a Resolution. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
gi|116666602|pdb|1VS7|C Chain C, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With The Antibiotic
Kasugamyin At 3.5a Resolution. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
gi|256032364|pdb|3E1A|O Chain O, Structure Of The 30s Subunit And The Trnas Of E. Coli
Ribosome In Pre-Accommodation State
gi|256032421|pdb|3E1C|O Chain O, Structure Of The 30s Subunit And The Trnas Of E. Coli
Ribosome In Post-Accommodation State
gi|257097324|pdb|3I1M|C Chain C, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
gi|257097376|pdb|3I1O|C Chain C, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
gi|257097428|pdb|3I1Q|C Chain C, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
gi|257097482|pdb|3I1S|C Chain C, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
gi|257097536|pdb|3I1Z|C Chain C, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
gi|257097591|pdb|3I21|C Chain C, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
gi|290560309|pdb|3KC4|C Chain C, Ribosome-Secy Complex. This Entry 3kc4 Contains 30s
Ribosomal Subnit. The 50s Ribosomal Subunit Can Be Found
In Pdb Entry 3kcr
gi|308198689|pdb|3OR9|C Chain C, Crystal Structure Of The E. Coli Ribosome Bound To
Cem-101. This File Contains The 30s Subunit Of The First
70s Ribosome.
gi|308198710|pdb|3ORA|C Chain C, Crystal Structure Of The E. Coli Ribosome Bound To
Cem-101. This File Contains The 30s Subunit Of The
Second 70s Ribosome.
gi|326634281|pdb|3IZV|G Chain G, Structural Insights Into Cognate Vs. Near-Cognate
Discrimination During Decoding. This Entry Contains The
Small Subunit Of A Ribosome Programmed With A
Near-Cognate Codon, AT-Site Trna, P-Site Trna, Mrna And
Ef-Tu
gi|326634306|pdb|3IZW|G Chain G, Structural Insights Into Cognate Vs. Near-Cognate
Discrimination During Decoding.This Entry Contains The
Small Subunit Of A Ribosome Programmed With A Cognate
Codon, AT-Site Trna, P-Site Trna, Mrna And Ef-Tu
gi|26110332|gb|AAN82518.1|AE016767_278 30S ribosomal protein S3 [Escherichia coli CFT073]
gi|42832|emb|CAA26466.1| unnamed protein product [Escherichia coli]
gi|606248|gb|AAA58111.1| 30S ribosomal subunit protein S3 [Escherichia coli str. K-12
substr. MG1655]
gi|1789710|gb|AAC76339.1| 30S ribosomal subunit protein S3 [Escherichia coli str. K-12
substr. MG1655]
gi|13363652|dbj|BAB37602.1| 30S ribosomal subunit protein S3 [Escherichia coli O157:H7 str.
Sakai]
gi|16421991|gb|AAL22297.1| 30S ribosomal subunit protein S3 [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|16505155|emb|CAD08179.1| 30S ribosomal subunit protein S3 [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29139974|gb|AAO71538.1| 30S ribosomal subunit protein S3 [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|30043647|gb|AAP19367.1| 30S ribosomal subunit protein S3 [Shigella flexneri 2a str. 2457T]
gi|56129610|gb|AAV79116.1| 30S ribosomal subunit protein S3 [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|62129571|gb|AAX67274.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|73857310|gb|AAZ90017.1| 30S ribosomal subunit protein S3 [Shigella sonnei Ss046]
gi|81242758|gb|ABB63468.1| 30S ribosomal subunit protein S3 [Shigella dysenteriae Sd197]
gi|81247088|gb|ABB67796.1| 30S ribosomal subunit protein S3 [Shigella boydii Sb227]
gi|85676727|dbj|BAE77977.1| 30S ribosomal subunit protein S3 [Escherichia coli str. K12 substr.
W3110]
gi|91074321|gb|ABE09202.1| 30S ribosomal subunit protein S3 [Escherichia coli UTI89]
gi|110345145|gb|ABG71382.1| 30S ribosomal protein S3 [Escherichia coli 536]
gi|110616710|gb|ABF05377.1| 30S ribosomal subunit protein S3 [Shigella flexneri 5 str. 8401]
gi|115514717|gb|ABJ02792.1| 30S ribosomal subunit protein S3 [Escherichia coli APEC O1]
gi|145320255|gb|ABP62402.1| SSU ribosomal protein S3P [Enterobacter sp. 638]
gi|157068468|gb|ABV07723.1| ribosomal protein S3 [Escherichia coli HS]
gi|157079953|gb|ABV19661.1| ribosomal protein S3 [Escherichia coli E24377A]
gi|157086096|gb|ABV15774.1| hypothetical protein CKO_04729 [Citrobacter koseri ATCC BAA-895]
gi|160867361|gb|ABX23984.1| hypothetical protein SARI_04195 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
gi|161365824|gb|ABX69592.1| hypothetical protein SPAB_04275 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|169753378|gb|ACA76077.1| ribosomal protein S3 [Escherichia coli ATCC 8739]
gi|170121607|gb|EDS90538.1| ribosomal protein S3 [Escherichia albertii TW07627]
gi|170521095|gb|ACB19273.1| ribosomal protein S3 [Escherichia coli SMS-3-5]
gi|187429270|gb|ACD08544.1| ribosomal protein S3 [Shigella boydii CDC 3083-94]
gi|188487203|gb|EDU62306.1| ribosomal protein S3 [Escherichia coli 53638]
gi|188998459|gb|EDU67457.1| ribosomal protein S3 [Escherichia coli O157:H7 str. EC4076]
gi|189358885|gb|EDU77304.1| ribosomal protein S3 [Escherichia coli O157:H7 str. EC4401]
gi|189361723|gb|EDU80142.1| ribosomal protein S3 [Escherichia coli O157:H7 str. EC4486]
gi|190905052|gb|EDV64716.1| ribosomal protein S3 [Escherichia coli F11]
gi|194403714|gb|ACF63936.1| ribosomal protein S3 [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|194410116|gb|ACF70335.1| ribosomal protein S3 [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194713348|gb|ACF92569.1| ribosomal protein S3 [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|195628911|gb|EDX48321.1| ribosomal protein S3 [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|197095760|emb|CAR61330.1| 30S ribosomal subunit protein S3 [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|197213136|gb|ACH50533.1| ribosomal protein S3 [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197242775|gb|EDY25395.1| ribosomal protein S3 [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197937013|gb|ACH74346.1| ribosomal protein S3 [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|199605747|gb|EDZ04292.1| ribosomal protein S3 [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|205274719|emb|CAR39775.1| 30S ribosomal subunit protein S3 [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|206710479|emb|CAR34837.1| 30S ribosomal subunit protein S3 [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|208726356|gb|EDZ75957.1| ribosomal protein S3 [Escherichia coli O157:H7 str. EC4206]
gi|208733272|gb|EDZ81959.1| ribosomal protein S3 [Escherichia coli O157:H7 str. EC4045]
gi|208741596|gb|EDZ89278.1| ribosomal protein S3 [Escherichia coli O157:H7 str. EC4042]
gi|209161895|gb|ACI39328.1| ribosomal protein S3 [Escherichia coli O157:H7 str. EC4115]
gi|209757098|gb|ACI76861.1| 30S ribosomal subunit protein S3 [Escherichia coli]
gi|209757100|gb|ACI76862.1| 30S ribosomal subunit protein S3 [Escherichia coli]
gi|209757102|gb|ACI76863.1| 30S ribosomal subunit protein S3 [Escherichia coli]
gi|209757104|gb|ACI76864.1| 30S ribosomal subunit protein S3 [Escherichia coli]
gi|209757106|gb|ACI76865.1| 30S ribosomal subunit protein S3 [Escherichia coli]
gi|209914039|dbj|BAG79113.1| 30S ribosomal protein S3 [Escherichia coli SE11]
gi|215266686|emb|CAS11125.1| 30S ribosomal subunit protein S3 [Escherichia coli O127:H6 str.
E2348/69]
gi|217320869|gb|EEC29293.1| ribosomal protein S3 [Escherichia coli O157:H7 str. TW14588]
gi|218353738|emb|CAV00027.1| 30S ribosomal subunit protein S3 [Escherichia coli 55989]
gi|218358130|emb|CAQ90777.1| 30S ribosomal subunit protein S3 [Escherichia fergusonii ATCC
35469]
gi|218362639|emb|CAR00265.1| 30S ribosomal subunit protein S3 [Escherichia coli IAI1]
gi|218367144|emb|CAR04918.1| 30S ribosomal subunit protein S3 [Escherichia coli S88]
gi|218372062|emb|CAR19922.1| 30S ribosomal subunit protein S3 [Escherichia coli IAI39]
gi|218429164|emb|CAR10116.2| 30S ribosomal subunit protein S3 [Escherichia coli ED1a]
gi|218434018|emb|CAR14935.1| 30S ribosomal subunit protein S3 [Escherichia coli UMN026]
gi|222035023|emb|CAP77766.1| 30S ribosomal protein S3 [Escherichia coli LF82]
gi|224469757|gb|ACN47587.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|226838981|gb|EEH71004.1| 30S ribosomal subunit protein S3 [Escherichia sp. 1_1_43]
gi|226902308|gb|EEH88567.1| 30S ribosomal subunit protein S3 [Escherichia sp. 3_2_53FAA]
gi|226909271|gb|EEH95189.1| 30S ribosomal protein S3 [Citrobacter sp. 30_2]
gi|227839589|gb|EEJ50055.1| 30S ribosomal protein S3 [Escherichia coli 83972]
gi|238859798|gb|ACR61796.1| 30S ribosomal subunit protein S3 [Escherichia coli BW2952]
gi|242378841|emb|CAQ33633.1| 30S ribosomal subunit protein S3, subunit of 30S ribosomal subunit
and ribosome [Escherichia coli BL21(DE3)]
gi|253322906|gb|ACT27508.1| ribosomal protein S3 [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253975143|gb|ACT40814.1| 30S ribosomal protein S3 [Escherichia coli B str. REL606]
gi|253979299|gb|ACT44969.1| 30S ribosomal protein S3 [Escherichia coli BL21(DE3)]
gi|254594651|gb|ACT74012.1| 30S ribosomal subunit protein S3 [Escherichia coli O157:H7 str.
TW14359]
gi|257756084|dbj|BAI27586.1| 30S ribosomal subunit protein S3 [Escherichia coli O26:H11 str.
11368]
gi|257761259|dbj|BAI32756.1| 30S ribosomal subunit protein S3 [Escherichia coli O103:H2 str.
12009]
gi|257766413|dbj|BAI37908.1| 30S ribosomal subunit protein S3 [Escherichia coli O111:H- str.
11128]
gi|260447667|gb|ACX38089.1| ribosomal protein S3 [Escherichia coli DH1]
gi|261248590|emb|CBG26428.1| 30S ribosomal subunit protein S3 [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|267995643|gb|ACY90528.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|281180349|dbj|BAI56679.1| 30S ribosomal protein S3 [Escherichia coli SE15]
gi|282951504|emb|CBG91203.1| 30S ribosomal subunit protein S3 [Citrobacter rodentium ICC168]
gi|284923320|emb|CBG36414.1| 30S ribosomal subunit protein S3 [Escherichia coli 042]
gi|288314962|gb|EFC53900.1| ribosomal protein S3 [Enterobacter cancerogenus ATCC 35316]
gi|290764545|gb|ADD58506.1| 30S ribosomal protein S3 [Escherichia coli O55:H7 str. CB9615]
gi|291068410|gb|EFE06519.1| ribosomal protein S3 [Citrobacter youngae ATCC 29220]
gi|291321758|gb|EFE61189.1| 30S ribosomal protein S3 [Escherichia coli B088]
gi|291425722|gb|EFE98756.1| 30S ribosomal protein S3 [Escherichia coli FVEC1412]
gi|291431307|gb|EFF04292.1| 30S ribosomal protein S3 [Escherichia coli B185]
gi|291468380|gb|EFF10873.1| 30S ribosomal protein S3 [Escherichia coli B354]
gi|294489965|gb|ADE88721.1| ribosomal protein S3 [Escherichia coli IHE3034]
gi|295059481|gb|ADF64219.1| 30S ribosomal protein S3 [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295096955|emb|CBK86045.1| SSU ribosomal protein S3P [Enterobacter cloacae subsp. cloacae NCTC
9394]
gi|298276487|gb|EFI18005.1| 30S ribosomal protein S3 [Escherichia coli FVEC1302]
gi|299881666|gb|EFI89877.1| ribosomal protein S3 [Escherichia coli MS 196-1]
gi|300301911|gb|EFJ58296.1| ribosomal protein S3 [Escherichia coli MS 185-1]
gi|300309003|gb|EFJ63523.1| ribosomal protein S3 [Escherichia coli MS 200-1]
gi|300318240|gb|EFJ68024.1| ribosomal protein S3 [Escherichia coli MS 175-1]
gi|300359493|gb|EFJ75363.1| ribosomal protein S3 [Escherichia coli MS 198-1]
gi|300399532|gb|EFJ83070.1| ribosomal protein S3 [Escherichia coli MS 69-1]
gi|300404435|gb|EFJ87973.1| ribosomal protein S3 [Escherichia coli MS 84-1]
gi|300409396|gb|EFJ92934.1| ribosomal protein S3 [Escherichia coli MS 45-1]
gi|300414548|gb|EFJ97858.1| ribosomal protein S3 [Escherichia coli MS 115-1]
gi|300421725|gb|EFK05036.1| ribosomal protein S3 [Escherichia coli MS 182-1]
gi|300453782|gb|EFK17402.1| ribosomal protein S3 [Escherichia coli MS 116-1]
gi|300459468|gb|EFK22961.1| ribosomal protein S3 [Escherichia coli MS 21-1]
gi|300460031|gb|EFK23524.1| ribosomal protein S3 [Escherichia coli MS 187-1]
gi|300524649|gb|EFK45718.1| ribosomal protein S3 [Escherichia coli MS 119-7]
gi|300532368|gb|EFK53430.1| ribosomal protein S3 [Escherichia coli MS 107-1]
gi|300839218|gb|EFK66978.1| ribosomal protein S3 [Escherichia coli MS 124-1]
gi|300847998|gb|EFK75758.1| ribosomal protein S3 [Escherichia coli MS 78-1]
gi|301077769|gb|EFK92575.1| ribosomal protein S3 [Escherichia coli MS 146-1]
gi|301159977|emb|CBW19496.1| 30S ribosomal subunit protein S3 [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|305850739|gb|EFM51196.1| 30S ribosomal protein S3 [Escherichia coli NC101]
gi|306905456|gb|EFN35991.1| ribosomal protein S3 [Escherichia coli W]
gi|307555402|gb|ADN48177.1| 30S ribosomal protein S3 [Escherichia coli ABU 83972]
gi|307628349|gb|ADN72653.1| 30S ribosomal protein S3 [Escherichia coli UM146]
gi|308121639|gb|EFO58901.1| ribosomal protein S3 [Escherichia coli MS 145-7]
gi|308926756|gb|EFP72232.1| ribosomal protein S3 [Shigella dysenteriae 1617]
gi|310334802|gb|EFQ01007.1| ribosomal protein S3 [Escherichia coli 1827-70]
gi|312287186|gb|EFR15096.1| ribosomal protein S3 [Escherichia coli 2362-75]
gi|312914457|dbj|BAJ38431.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|312947865|gb|ADR28692.1| 30S ribosomal protein S3 [Escherichia coli O83:H1 str. NRG 857C]
gi|313647376|gb|EFS11828.1| ribosomal protein S3 [Shigella flexneri 2a str. 2457T]
gi|315062606|gb|ADT76933.1| 30S ribosomal subunit protein S3 [Escherichia coli W]
gi|315137889|dbj|BAJ45048.1| 30S ribosomal protein S3 [Escherichia coli DH1]
gi|315255897|gb|EFU35865.1| ribosomal protein S3 [Escherichia coli MS 85-1]
gi|315284611|gb|EFU44056.1| ribosomal protein S3 [Escherichia coli MS 110-3]
gi|315292369|gb|EFU51721.1| ribosomal protein S3 [Escherichia coli MS 153-1]
gi|315298612|gb|EFU57867.1| ribosomal protein S3 [Escherichia coli MS 16-3]
gi|315616991|gb|EFU97603.1| ribosomal protein S3 [Escherichia coli 3431]
gi|320087879|emb|CBY97642.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|320180148|gb|EFW55087.1| SSU ribosomal protein S3p (S3e) [Shigella boydii ATCC 9905]
gi|320187032|gb|EFW61744.1| SSU ribosomal protein S3p (S3e) [Shigella flexneri CDC 796-83]
gi|320191655|gb|EFW66305.1| SSU ribosomal protein S3p (S3e) [Escherichia coli O157:H7 str.
EC1212]
gi|320199498|gb|EFW74088.1| SSU ribosomal protein S3p (S3e) [Escherichia coli EC4100B]
gi|320639619|gb|EFX09213.1| 30S ribosomal protein S3 [Escherichia coli O157:H7 str. G5101]
gi|320645117|gb|EFX14133.1| 30S ribosomal protein S3 [Escherichia coli O157:H- str. 493-89]
gi|320650428|gb|EFX18894.1| 30S ribosomal protein S3 [Escherichia coli O157:H- str. H 2687]
gi|320655953|gb|EFX23873.1| 30S ribosomal protein S3 [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320661405|gb|EFX28820.1| 30S ribosomal protein S3 [Escherichia coli O55:H7 str. USDA 5905]
gi|320666427|gb|EFX33410.1| 30S ribosomal protein S3 [Escherichia coli O157:H7 str. LSU-61]
gi|321226481|gb|EFX51531.1| SSU ribosomal protein S3p (S3e) [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|322615025|gb|EFY11949.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322617312|gb|EFY14213.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322625534|gb|EFY22359.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322626376|gb|EFY23185.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322632112|gb|EFY28865.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322635009|gb|EFY31732.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322643290|gb|EFY39857.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322646626|gb|EFY43133.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322649972|gb|EFY46391.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322652689|gb|EFY49029.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322659554|gb|EFY55798.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322665504|gb|EFY61691.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322670398|gb|EFY66537.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322670471|gb|EFY66605.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322675047|gb|EFY71130.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322681584|gb|EFY77613.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322685928|gb|EFY81917.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|322716425|gb|EFZ07996.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
gi|323131792|gb|ADX19222.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|323154152|gb|EFZ40355.1| ribosomal protein S3 [Escherichia coli EPECa14]
gi|323162993|gb|EFZ48828.1| ribosomal protein S3 [Escherichia coli E128010]
gi|323164878|gb|EFZ50669.1| ribosomal protein S3 [Shigella sonnei 53G]
gi|323173950|gb|EFZ59578.1| ribosomal protein S3 [Escherichia coli LT-68]
gi|323179150|gb|EFZ64724.1| ribosomal protein S3 [Escherichia coli 1180]
gi|323182792|gb|EFZ68193.1| ribosomal protein S3 [Escherichia coli 1357]
gi|323189081|gb|EFZ74365.1| ribosomal protein S3 [Escherichia coli RN587/1]
gi|323194036|gb|EFZ79236.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323196446|gb|EFZ81597.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323202315|gb|EFZ87360.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323207336|gb|EFZ92286.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323211228|gb|EFZ96073.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323216063|gb|EGA00794.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323223446|gb|EGA07774.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323226824|gb|EGA11014.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323231814|gb|EGA15924.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323233233|gb|EGA17328.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323237300|gb|EGA21365.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323245535|gb|EGA29534.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323249041|gb|EGA32963.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323250664|gb|EGA34545.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323256893|gb|EGA40607.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323263042|gb|EGA46589.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323266042|gb|EGA49537.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323272799|gb|EGA56202.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|323376807|gb|ADX49075.1| ribosomal protein S3 [Escherichia coli KO11]
gi|323934488|gb|EGB30896.1| ribosomal protein S3 [Escherichia coli E1520]
gi|323939264|gb|EGB35476.1| ribosomal protein S3 [Escherichia coli E482]
gi|323944265|gb|EGB40341.1| ribosomal protein S3 [Escherichia coli H120]
gi|323950228|gb|EGB46110.1| ribosomal protein S3 [Escherichia coli H252]
gi|323954563|gb|EGB50346.1| ribosomal protein S3 [Escherichia coli H263]
gi|323959535|gb|EGB55188.1| ribosomal protein S3 [Escherichia coli H489]
gi|323966276|gb|EGB61711.1| ribosomal protein S3 [Escherichia coli M863]
gi|323970118|gb|EGB65392.1| ribosomal protein S3 [Escherichia coli TA007]
gi|323974733|gb|EGB69846.1| ribosomal protein S3 [Escherichia coli TW10509]
gi|324009005|gb|EGB78224.1| ribosomal protein S3 [Escherichia coli MS 57-2]
gi|324014930|gb|EGB84149.1| ribosomal protein S3 [Escherichia coli MS 60-1]
gi|324017868|gb|EGB87087.1| ribosomal protein S3 [Escherichia coli MS 117-3]
gi|324111993|gb|EGC05972.1| ribosomal protein S3 [Escherichia fergusonii B253]
gi|324116296|gb|EGC10216.1| ribosomal protein S3 [Escherichia coli E1167]
gi|325498880|gb|EGC96739.1| 30S ribosomal protein S3 [Escherichia fergusonii ECD227]
gi|326342559|gb|EGD66333.1| SSU ribosomal protein S3p (S3e) [Escherichia coli O157:H7 str.
1044]
gi|326344546|gb|EGD68295.1| SSU ribosomal protein S3p (S3e) [Escherichia coli O157:H7 str.
1125]
gi|326625177|gb|EGE31522.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
gi|326630087|gb|EGE36430.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
gi|327250962|gb|EGE62655.1| ribosomal protein S3 [Escherichia coli STEC_7v]
gi|330909356|gb|EGH37870.1| SSU ribosomal protein S3p (S3e) [Escherichia coli AA86]
gi|331036304|gb|EGI08530.1| ribosomal protein S3 [Escherichia coli H736]
gi|331041609|gb|EGI13753.1| ribosomal protein S3 [Escherichia coli M605]
gi|331046922|gb|EGI19000.1| ribosomal protein S3 [Escherichia coli M718]
gi|331052819|gb|EGI24852.1| ribosomal protein S3 [Escherichia coli TA206]
gi|331057437|gb|EGI29423.1| ribosomal protein S3 [Escherichia coli TA143]
gi|331062205|gb|EGI34125.1| ribosomal protein S3 [Escherichia coli TA271]
gi|331067726|gb|EGI39124.1| ribosomal protein S3 [Escherichia coli TA280]
gi|331072555|gb|EGI43880.1| ribosomal protein S3 [Escherichia coli H591]
gi|331077327|gb|EGI48539.1| ribosomal protein S3 [Escherichia coli H299]
gi|332085465|gb|EGI90631.1| ribosomal protein S3 [Shigella boydii 5216-82]
gi|332086053|gb|EGI91217.1| ribosomal protein S3 [Shigella dysenteriae 155-74]
gi|332090373|gb|EGI95471.1| ribosomal protein S3 [Shigella boydii 3594-74]
gi|332104221|gb|EGJ07567.1| 30S ribosomal protein S3 [Shigella sp. D9]
Length = 233
Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats.
Identities = 113/230 (49%), Positives = 157/230 (68%), Gaps = 4/230 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS WFA E+ L D K+R+YL L +A V++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + + PAA+ + ++
Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRK 230
>gi|220930971|ref|YP_002507879.1| ribosomal protein S3 [Halothermothrix orenii H 168]
gi|254764533|sp|B8D0D0|RS3_HALOH RecName: Full=30S ribosomal protein S3
gi|219992281|gb|ACL68884.1| ribosomal protein S3 [Halothermothrix orenii H 168]
Length = 214
Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats.
Identities = 101/214 (47%), Positives = 153/214 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+GV W+++W+A + Y LL EDLKIR +++ + AG+++I+IER
Sbjct: 1 MGQKVHPHGLRVGVIKDWDAKWYADKNNYADLLQEDLKIRNHVKNKMYDAGISRIVIERV 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ VY+ARPG++IG+ G++++ +RK + MT + ++V EV PE++A L+A++I
Sbjct: 61 ANRLKLDVYTARPGMVIGRGGSEVDALRKDIEQMTGKNVQINVVEVEDPELDAQLVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR+ FRRAMK+A+ AMR GA+G KV +SGRL GAE++RTE Y +GRVPL TLRA
Sbjct: 121 AAQLERRISFRRAMKQAMNRAMRMGAEGFKVQSSGRLGGAEMARTEGYSDGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
IDYG A A T YG G+KV+++ + + + +
Sbjct: 181 DIDYGFAEAYTTYGKIGVKVWINKGEVLPEVEDK 214
>gi|326315230|ref|YP_004232902.1| 30S ribosomal protein S3 [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323372066|gb|ADX44335.1| ribosomal protein S3 [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 293
Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats.
Identities = 120/218 (55%), Positives = 163/218 (74%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V+ W SRW+A ++ +L ED+K+REYL+ LK A V++ILIER
Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYASNRDFAGMLAEDIKVREYLKAKLKNAAVSRILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI +YSARPG++IGKKG DIE ++K+L++ + +++ EV KPEI+A LIA SI
Sbjct: 61 AKNARITIYSARPGVVIGKKGEDIENLKKELASRLGVPVAVNIEEVRKPEIDAKLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLE+R++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
IDYGT+ A+T YG G+KV+V D + +D +
Sbjct: 181 DIDYGTSEAKTTYGVIGVKVWVYKGDTLGRNDLPVAET 218
>gi|238754181|ref|ZP_04615539.1| 30S ribosomal protein S3 [Yersinia ruckeri ATCC 29473]
gi|238707677|gb|EEQ00037.1| 30S ribosomal protein S3 [Yersinia ruckeri ATCC 29473]
Length = 232
Score = 269 bits (689), Expect = 1e-70, Method: Composition-based stats.
Identities = 111/229 (48%), Positives = 158/229 (68%), Gaps = 3/229 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS W+A E+ L D K+R++L L +A V++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWYANTKEFADNLDSDFKVRQFLTKELVKASVSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS---DSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + + + PAA+ + ++
Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEPAAQPKKQQRK 229
>gi|253701916|ref|YP_003023105.1| 30S ribosomal protein S3 [Geobacter sp. M21]
gi|259495249|sp|C6E4Q1|RS3_GEOSM RecName: Full=30S ribosomal protein S3
gi|251776766|gb|ACT19347.1| ribosomal protein S3 [Geobacter sp. M21]
Length = 211
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 114/212 (53%), Positives = 160/212 (75%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI FRLGV TW+S+W+A +Y LLHEDLK+R +L+ L +GV+KI IER
Sbjct: 1 MGQKVNPIGFRLGVIKTWDSKWYAE-KDYAKLLHEDLKLRNFLKKRLYHSGVSKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I +++ARPGLIIGKKG+++E ++K+L+ +T E++L++ EV KPE++A L+A+++
Sbjct: 60 AGKAKINIFTARPGLIIGKKGSEVETLKKELAKLTEKEVYLNIQEVRKPELDAQLVAENV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR+ FRRAMK++V S ++FGA G+++ SGRL GAE+SRTE Y EGRVPL TLRA
Sbjct: 120 AMQLERRIAFRRAMKKSVTSTLKFGAKGIRITCSGRLGGAEMSRTEWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
IDYG A A+T YG G+KV + + +S
Sbjct: 180 DIDYGFAEAKTTYGIIGVKVLLFKGEVLSAKK 211
>gi|161510956|ref|YP_089234.2| 30S ribosomal protein S3 [Mannheimia succiniciproducens MBEL55E]
gi|61215475|sp|Q65QW1|RS3_MANSM RecName: Full=30S ribosomal protein S3
Length = 235
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 110/230 (47%), Positives = 152/230 (66%), Gaps = 6/230 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP RLG+ W+S WFA ++ + L D K+R++L L A V++I IER
Sbjct: 1 MGQKVNPHGIRLGIVKPWSSTWFANTQDFASNLDGDFKVRKFLNKELANASVSRITIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVAKIAGVPAQINIAEVKKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD------SDSTIPAAEHRVVE 224
IDY T+ A T YG G+KV++ + + PAA +
Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAIAQQPEQQPAAPKKAPR 230
>gi|213861394|ref|ZP_03385864.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
Length = 220
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 112/220 (50%), Positives = 154/220 (70%), Gaps = 1/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS WFA E+ L D K+R+YL L +A V++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
IDY T+ A T YG G+KV++ + E+ + + E
Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIF-KGEILGGMAAVEQPEK 219
>gi|310817003|ref|YP_003964967.1| 30S ribosomal protein S3 [Ketogulonicigenium vulgare Y25]
gi|308755738|gb|ADO43667.1| 30S ribosomal protein S3 [Ketogulonicigenium vulgare Y25]
Length = 238
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 129/225 (57%), Positives = 173/225 (76%), Gaps = 4/225 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+NP+ RL VN TW+SRW+A +YG LL EDLKI+++++ KQAG++ ++IER
Sbjct: 1 MGNKVNPVGMRLQVNRTWDSRWYADTKDYGNLLLEDLKIKDFVRKEAKQAGISHVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +++ARPG+IIGKKG DIE +RKKLS +T+SE+HL++ EV KPE++A L+ +SI
Sbjct: 61 HKKCRVTIHAARPGVIIGKKGADIETLRKKLSALTDSELHLNIVEVRKPELDAALVGESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVSFRRAMKRAVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY + A+TAYG GIKV++ + E+ + D P A R + +
Sbjct: 181 DIDYALSEAQTAYGIIGIKVWIF-KGEILEHD---PQAHDRRITE 221
>gi|92112560|ref|YP_572488.1| 30S ribosomal protein S3 [Chromohalobacter salexigens DSM 3043]
gi|122990610|sp|Q1R0G9|RS3_CHRSD RecName: Full=30S ribosomal protein S3
gi|91795650|gb|ABE57789.1| SSU ribosomal protein S3P [Chromohalobacter salexigens DSM 3043]
Length = 232
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 108/224 (48%), Positives = 149/224 (66%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP RLG+ S W+A Y L+ DL++R +L+ LK A V+ I IER
Sbjct: 1 MGQKVNPTGIRLGIVKDHRSVWYAERGAYADKLNNDLEVRRFLEQRLKNASVSDITIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
N RI +++ARPG++IGKKG D++++R+ +S M +H+++ EV KPE++A L+AQ++
Sbjct: 61 ANNARITIHTARPGIVIGKKGEDVDRLRRDVSEMMGVPVHVNIEEVRKPELDAQLVAQNV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV+FRRAMKRAVQ+AMR GA G+K+ SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 CGQLERRVMFRRAMKRAVQNAMRLGAGGIKIQLSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
IDY T A T YG G+KV+V + + + +
Sbjct: 181 DIDYATYEAHTTYGVIGVKVWVFKGEILGGIEEVRAKQKQAQAP 224
>gi|206901441|ref|YP_002250707.1| ribosomal protein S3 [Dictyoglomus thermophilum H-6-12]
gi|226697700|sp|B5YDU9|RS3_DICT6 RecName: Full=30S ribosomal protein S3
gi|206740544|gb|ACI19602.1| ribosomal protein S3 [Dictyoglomus thermophilum H-6-12]
Length = 245
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 106/227 (46%), Positives = 151/227 (66%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +P FRLG+ W S W+A S+Y +LLHED IR YL+ + QAG++ I IER
Sbjct: 1 MGQKTHPYGFRLGITKDWKSHWYAERSDYSSLLHEDWAIRNYLKKNYYQAGISLIEIERK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
I +++ARPG++IG+ G++IE IRK L +TN + ++V EV PE++A L+A++
Sbjct: 61 AANRVDITIHTARPGMLIGRGGSEIENIRKNLIKLTNKNVFVNVQEVKNPELDAQLVAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA Q+E+R+ ++RAMK+A+ A+R GA G+KV+ SGRLNGAE++R+E + EGR+PLQTL
Sbjct: 121 IAMQIEKRINYKRAMKQAINRALRAGAKGIKVMCSGRLNGAEIARSEWFREGRIPLQTLT 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
A IDYG A A T G G+KV++ D I + V K
Sbjct: 181 ADIDYGFAEAFTISGVIGVKVWIYKGDVPELHKEAIQELPEKAVPKK 227
>gi|157372770|ref|YP_001480759.1| 30S ribosomal protein S3 [Serratia proteamaculans 568]
gi|172047789|sp|A8GKJ1|RS3_SERP5 RecName: Full=30S ribosomal protein S3
gi|157324534|gb|ABV43631.1| ribosomal protein S3 [Serratia proteamaculans 568]
Length = 232
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 112/229 (48%), Positives = 158/229 (68%), Gaps = 3/229 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS W+A E+ L D K+R++L L +A V++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWYANTKEFADNLDSDFKVRQFLIKELAKASVSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK ++N+ +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVANIAGVPAQINIAEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS---DSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + + + PAA+ + ++
Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEPAAQPKKQQRK 229
>gi|78064930|ref|YP_367699.1| 30S ribosomal protein S3 [Burkholderia sp. 383]
gi|107024297|ref|YP_622624.1| 30S ribosomal protein S3 [Burkholderia cenocepacia AU 1054]
gi|115350328|ref|YP_772167.1| 30S ribosomal protein S3 [Burkholderia ambifaria AMMD]
gi|116688378|ref|YP_834001.1| 30S ribosomal protein S3 [Burkholderia cenocepacia HI2424]
gi|134294449|ref|YP_001118184.1| 30S ribosomal protein S3 [Burkholderia vietnamiensis G4]
gi|170700700|ref|ZP_02891695.1| ribosomal protein S3 [Burkholderia ambifaria IOP40-10]
gi|170731688|ref|YP_001763635.1| 30S ribosomal protein S3 [Burkholderia cenocepacia MC0-3]
gi|171318354|ref|ZP_02907512.1| ribosomal protein S3 [Burkholderia ambifaria MEX-5]
gi|172059347|ref|YP_001806999.1| 30S ribosomal protein S3 [Burkholderia ambifaria MC40-6]
gi|206558647|ref|YP_002229407.1| 30S ribosomal protein S3 [Burkholderia cenocepacia J2315]
gi|91207644|sp|Q39KG1|RS3_BURS3 RecName: Full=30S ribosomal protein S3
gi|122324260|sp|Q0BJ40|RS3_BURCM RecName: Full=30S ribosomal protein S3
gi|123071807|sp|Q1BRV4|RS3_BURCA RecName: Full=30S ribosomal protein S3
gi|152060850|sp|A0K3N1|RS3_BURCH RecName: Full=30S ribosomal protein S3
gi|189044961|sp|A4JAP6|RS3_BURVG RecName: Full=30S ribosomal protein S3
gi|226697672|sp|B1YRD6|RS3_BURA4 RecName: Full=30S ribosomal protein S3
gi|226697673|sp|B1JU28|RS3_BURCC RecName: Full=30S ribosomal protein S3
gi|226697674|sp|B4E5C6|RS3_BURCJ RecName: Full=30S ribosomal protein S3
gi|77965675|gb|ABB07055.1| SSU ribosomal protein S3P [Burkholderia sp. 383]
gi|105894486|gb|ABF77651.1| SSU ribosomal protein S3P [Burkholderia cenocepacia AU 1054]
gi|115280316|gb|ABI85833.1| SSU ribosomal protein S3P [Burkholderia ambifaria AMMD]
gi|116646467|gb|ABK07108.1| SSU ribosomal protein S3P [Burkholderia cenocepacia HI2424]
gi|134137606|gb|ABO53349.1| SSU ribosomal protein S3P [Burkholderia vietnamiensis G4]
gi|169814930|gb|ACA89513.1| ribosomal protein S3 [Burkholderia cenocepacia MC0-3]
gi|170134370|gb|EDT02703.1| ribosomal protein S3 [Burkholderia ambifaria IOP40-10]
gi|171096432|gb|EDT41331.1| ribosomal protein S3 [Burkholderia ambifaria MEX-5]
gi|171991864|gb|ACB62783.1| ribosomal protein S3 [Burkholderia ambifaria MC40-6]
gi|198034684|emb|CAR50551.1| 30S ribosomal protein S3 [Burkholderia cenocepacia J2315]
Length = 266
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 117/229 (51%), Positives = 166/229 (72%), Gaps = 2/229 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V+ W SRW+A + + A+L ED+ +REYL+ LK A V +++IER
Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNNNFAAMLQEDIGVREYLKKKLKNASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI +YS+RPG++IGKKG DIE+++ +L +H+++ E+ KPE +A LIA SI
Sbjct: 61 AKNARITIYSSRPGVVIGKKGEDIEQLKTELQRRMGVPVHVNIEEIRKPETDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLERR++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI--PAAEHRVVEKDS 227
IDY T+ A+T YG G+KV+V D + +D+ + AE + +++
Sbjct: 181 DIDYATSEAKTTYGIIGVKVWVYKGDTLGRNDAPVVEEVAEDKRPRRNA 229
>gi|330430095|gb|AEC21429.1| 30S ribosomal protein S3 [Pusillimonas sp. T7-7]
Length = 267
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 121/218 (55%), Positives = 163/218 (74%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+PI FRL VN W+SRW+A +G +L ED+++REYL+ LK A V +++IER
Sbjct: 1 MGQKIHPIGFRLAVNRNWSSRWYADDKAFGGMLAEDIRVREYLKKKLKSASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI VYSARPG++IGK+G DIE ++ L + +H+++ E+ KPE +A LIA SI
Sbjct: 61 AKNARITVYSARPGVVIGKRGEDIENLKADLQRLMGVPVHVNIEEIRKPETDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
+IDYGT+ A+T YG GIKV+V D + + + A
Sbjct: 181 NIDYGTSEAQTTYGIIGIKVWVYKGDMLPNGELPPETA 218
>gi|317494336|ref|ZP_07952750.1| ribosomal protein S3 [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316917586|gb|EFV38931.1| ribosomal protein S3 [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 233
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 112/230 (48%), Positives = 157/230 (68%), Gaps = 4/230 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS WFA E+ L D K+R++L L +A V++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQFLTKELAKASVSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + + PAA+ + ++
Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRK 230
>gi|83591270|ref|YP_431279.1| 30S ribosomal protein S3 [Moorella thermoacetica ATCC 39073]
gi|123766691|sp|Q2RFQ3|RS3_MOOTA RecName: Full=30S ribosomal protein S3
gi|83574184|gb|ABC20736.1| SSU ribosomal protein S3P [Moorella thermoacetica ATCC 39073]
Length = 219
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 107/211 (50%), Positives = 153/211 (72%), Gaps = 1/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ W+SRW+A G EY LLHEDLKIRE+++ L QAG+A + IER
Sbjct: 1 MGQKVHPKGLRLGIIRDWDSRWYA-GKEYKTLLHEDLKIREFIKKRLYQAGIASVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++IV +A+PG++IG+ G ++E +RK L +T +++L++ E+ KPE+NA L+A+++
Sbjct: 60 ANRIKVIVNTAKPGIVIGRGGAEVEALRKDLERLTGKQVNLNIAEIKKPELNAQLVAENV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+R+ FRRAMK+AV AMR GA G+K+ GRL GAE++RTE Y EG+VPL TLRA
Sbjct: 120 AAQLEKRIAFRRAMKQAVGRAMRLGAQGIKIACGGRLAGAEIARTEWYSEGKVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYG A A T YG G+KV++ + + +
Sbjct: 180 DIDYGFAEANTTYGKIGVKVWIYKGEVLPER 210
>gi|257791918|ref|YP_003182524.1| 30S ribosomal protein S3 [Eggerthella lenta DSM 2243]
gi|317489924|ref|ZP_07948416.1| ribosomal protein S3 [Eggerthella sp. 1_3_56FAA]
gi|325829995|ref|ZP_08163453.1| ribosomal protein S3 [Eggerthella sp. HGA1]
gi|257475815|gb|ACV56135.1| ribosomal protein S3 [Eggerthella lenta DSM 2243]
gi|316910922|gb|EFV32539.1| ribosomal protein S3 [Eggerthella sp. 1_3_56FAA]
gi|325488162|gb|EGC90599.1| ribosomal protein S3 [Eggerthella sp. HGA1]
Length = 237
Score = 269 bits (689), Expect = 2e-70, Method: Composition-based stats.
Identities = 113/219 (51%), Positives = 150/219 (68%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG+ W SRW+A +Y L DL IR++L L +A V+KI IER
Sbjct: 1 MGQKVSPTGFRLGITEEWRSRWYAD-KDYAKNLANDLAIRKFLDKQLARAAVSKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+IIV +ARPG++IGKKG +I+ +RKKL + N + + V EV +PE++A LIAQS+
Sbjct: 60 GDKIKIIVTTARPGVVIGKKGAEIDSLRKKLEKVANGPVSIEVVEVKRPELDAALIAQSV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRAM++AVQSA + GA G+++ SGRL GAE+SR E Y EGRVPL TLRA
Sbjct: 120 AEQLEGRVAFRRAMRKAVQSARKSGAKGIRIQCSGRLGGAEMSRREWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDYG A A T GS G++V+V + + + PA E
Sbjct: 180 KIDYGFATAATTMGSIGVQVWVYHGEVLPGQKAPQPALE 218
>gi|330447031|ref|ZP_08310681.1| ribosomal protein S3 [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328491222|dbj|GAA05178.1| ribosomal protein S3 [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 229
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 110/227 (48%), Positives = 154/227 (67%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WN+ WFA E+ L D K+R++L L +A +++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNTTWFANSQEFADNLDGDFKVRQFLTKELAKASLSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++ L+A SI
Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDGQLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDY T+ A T YG G+KV++ + + P AE ++ S
Sbjct: 181 DIDYATSSAHTQYGVIGVKVWIFKGEVLGGMPVEEPKAEKPKKQRKS 227
>gi|332107872|gb|EGJ09096.1| 30S ribosomal protein S3 [Rubrivivax benzoatilyticus JA2]
Length = 289
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 115/220 (52%), Positives = 160/220 (72%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V W SRWFA + +L EDL++R+YL+ LK A V++ILIER
Sbjct: 1 MGQKIHPTGFRLSVTRAWGSRWFASNRNFAGMLAEDLQVRDYLKTKLKNAAVSRILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI ++SARPG++IGKKG DIE ++ +L+ + +++ EV KPE++A LIA SI
Sbjct: 61 AKNARITIFSARPGVVIGKKGEDIENLKAELTKRLGVPVAVNIEEVRKPEVDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLE+R++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TL+A
Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLKA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
IDYG + A+T YG G+KV+V D +++ ++ A
Sbjct: 181 DIDYGFSEAKTTYGVIGVKVWVYRGDRLANGEAPQLAKTE 220
>gi|89902549|ref|YP_525020.1| 30S ribosomal protein S3 [Rhodoferax ferrireducens T118]
gi|122996738|sp|Q21RW4|RS3_RHOFD RecName: Full=30S ribosomal protein S3
gi|89347286|gb|ABD71489.1| SSU ribosomal protein S3P [Rhodoferax ferrireducens T118]
Length = 298
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 120/224 (53%), Positives = 165/224 (73%), Gaps = 2/224 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL ++ W SRW+A ++ +L ED+K+REYL+ LK A V+++LIER
Sbjct: 1 MGQKIHPTGFRLSISRNWASRWYANDRDFAGMLAEDIKVREYLKAKLKNASVSRVLIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI ++SARPG++IGKKG DIE ++++LS + +++ EV KPEI+A LIA SI
Sbjct: 61 AKNARITIFSARPGVVIGKKGEDIENLKRELSRQLGVPVAVNIEEVRKPEIDAKLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++R E Y EGRVPL TLRA
Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRLGALGIKIMSSGRLNGIEIARCEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
IDYGT+ A+T YG G+KV+V D + +D +PAA +
Sbjct: 181 DIDYGTSEAQTTYGIIGVKVWVYKGDTLGRND--LPAAVEARTD 222
>gi|226329487|ref|ZP_03805005.1| hypothetical protein PROPEN_03396 [Proteus penneri ATCC 35198]
gi|225202673|gb|EEG85027.1| hypothetical protein PROPEN_03396 [Proteus penneri ATCC 35198]
Length = 224
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 112/220 (50%), Positives = 157/220 (71%), Gaps = 1/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS W+A +E+ L D K+R+YL L +A V++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWYAGTNEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKNVADIAGVPAQINIAEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
IDY T+ A+T YG G+KV++ + E+ + + AE
Sbjct: 181 DIDYNTSEAQTTYGVLGVKVWIF-KGEILGGMAAVEQAEK 219
>gi|326385093|ref|ZP_08206763.1| 30S ribosomal protein S3 [Gordonia neofelifaecis NRRL B-59395]
gi|326196178|gb|EGD53382.1| 30S ribosomal protein S3 [Gordonia neofelifaecis NRRL B-59395]
Length = 267
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 105/222 (47%), Positives = 147/222 (66%), Gaps = 2/222 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG+ WNSRW+A +Y + ED+ IR+ L L++AG++K+ IERT
Sbjct: 1 MGQKINPHGFRLGITTDWNSRWYAD-KQYAEYVKEDVAIRKLLSTGLERAGISKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PE +A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPEADAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAM + G G++V SGRL GAE+SR E Y EGRVPL TLR
Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPGVKGIRVQCSGRLGGAEMSRKEFYREGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
A IDYG A T +G G+KV++ D V AA
Sbjct: 180 ADIDYGLYEARTTFGRIGVKVWIYKGDIVGGRRELAAAAPAE 221
>gi|319787919|ref|YP_004147394.1| ribosomal protein S3 [Pseudoxanthomonas suwonensis 11-1]
gi|317466431|gb|ADV28163.1| ribosomal protein S3 [Pseudoxanthomonas suwonensis 11-1]
Length = 242
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 118/226 (52%), Positives = 158/226 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K++P RLG+ WNS+W+A EY L DLK+R+ L+ L QAG+++ILIER
Sbjct: 1 MGHKVHPTGIRLGIAKDWNSKWYAGKGEYADYLAADLKVRKMLRKKLAQAGISRILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ +++ARPG++IGK+G DIEK+RK++S M H++V+EV KPE++A L+A+SI
Sbjct: 61 AKTARVTIHTARPGVVIGKRGEDIEKLRKEVSEMMGVPAHINVSEVRKPELDAQLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERR++FRRAMKRAV +AMR GA G+KV +GRLNGAE++R+E Y EGRVPL TLRA
Sbjct: 121 AQQLERRIMFRRAMKRAVGNAMRLGALGIKVNVAGRLNGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDYG A A T YG GIKV+V + + E +
Sbjct: 181 DIDYGFAEAHTTYGVIGIKVWVYKGEIFDFAQVGQEKQEEASSPRG 226
>gi|326793564|ref|YP_004311384.1| ribosomal protein S3 [Marinomonas mediterranea MMB-1]
gi|326544328|gb|ADZ89548.1| ribosomal protein S3 [Marinomonas mediterranea MMB-1]
Length = 226
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 112/227 (49%), Positives = 154/227 (67%), Gaps = 2/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ S W+A Y LL DL++R+YL+ L QA V++I I+R
Sbjct: 1 MGQKVHPTGIRLGIVKDHTSTWYANNQNYSKLLLNDLQVRKYLEEKLVQASVSRIEIQRP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ RI +++ARPG++IGKKG D+EK+R +S M +H+++ E+ KPE+++ L+AQ+I
Sbjct: 61 AQTARITIHTARPGIVIGKKGEDVEKLRNAVSKMMGVPVHINIEEIRKPELDSKLVAQNI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AGQLERRVMFRRAMKRAVQNAMRAGAKGIKVQVSGRLGGAEIARAEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDY T A T YG G+KV++ + + + AE +K S
Sbjct: 181 DIDYATYEASTTYGIIGVKVWIFKGEILGGIEQV--RAEKGAQKKKS 225
>gi|304399285|ref|ZP_07381151.1| ribosomal protein S3 [Pantoea sp. aB]
gi|308188351|ref|YP_003932482.1| 30S ribosomal protein S3 [Pantoea vagans C9-1]
gi|304353211|gb|EFM17592.1| ribosomal protein S3 [Pantoea sp. aB]
gi|308058861|gb|ADO11033.1| 30S ribosomal protein S3 [Pantoea vagans C9-1]
Length = 232
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 111/229 (48%), Positives = 157/229 (68%), Gaps = 3/229 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS WFA +E+ L D K+R++L L +A V++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTNEFADNLDSDFKVRQFLTKELAKASVSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRTVVAKIAGVPAQINIAEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS---DSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + + + PAA+ + ++
Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEPAAQPKKQQRK 229
>gi|183600747|ref|ZP_02962240.1| hypothetical protein PROSTU_04341 [Providencia stuartii ATCC 25827]
gi|188019725|gb|EDU57765.1| hypothetical protein PROSTU_04341 [Providencia stuartii ATCC 25827]
Length = 233
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 112/230 (48%), Positives = 160/230 (69%), Gaps = 4/230 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS W+A +E+ L D K+R+YL L +A +++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWYANTNEFADNLDSDYKVRQYLNKELAKASISRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKTVADIAGVPAQINIAEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + + + PAA+ + ++
Sbjct: 181 DIDYNTSEAHTTYGVLGVKVWIFKGEILGGMAAVEQAEKPAAQPKKQQRK 230
>gi|121997643|ref|YP_001002430.1| 30S ribosomal protein S3 [Halorhodospira halophila SL1]
gi|152060865|sp|A1WVB6|RS3_HALHL RecName: Full=30S ribosomal protein S3
gi|121589048|gb|ABM61628.1| SSU ribosomal protein S3P [Halorhodospira halophila SL1]
Length = 228
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 108/223 (48%), Positives = 155/223 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K +P FRLGV W S W+A S +G L+ DL++RE+++ LK A V++I IER
Sbjct: 1 MGNKTHPTGFRLGVTEDWRSMWYADSSNFGKYLNTDLEVREFIRERLKNASVSRIQIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN + +++ARPG++IGKKG DI+++R +++ +H+++ E+ KPE ++ L+A+SI
Sbjct: 61 AKNALVTIHTARPGIVIGKKGEDIDRLRGEVAARMGVPVHINIEEIRKPEADSKLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRA+KRAV +A R GA G+KV SGRLNG+E++RTE Y EGRVPL TLRA
Sbjct: 121 AGQLERRVMFRRALKRAVGNAQRVGAQGIKVQVSGRLNGSEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223
IDYG A A+T YG G+KV++ + + + PA +
Sbjct: 181 DIDYGFAEAKTTYGVIGVKVWIFKGEIIDTENEGAPAERVKRA 223
>gi|163859267|ref|YP_001633565.1| 30S ribosomal protein S3 [Bordetella petrii DSM 12804]
gi|226697669|sp|A9IIZ1|RS3_BORPD RecName: Full=30S ribosomal protein S3
gi|163262995|emb|CAP45298.1| 30S ribosomal protein S3 [Bordetella petrii]
Length = 263
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 119/218 (54%), Positives = 163/218 (74%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V W+SRWFA +G++L ED+++REYL+ LK A V +++IER
Sbjct: 1 MGQKIHPTGFRLAVTRNWSSRWFADDKAFGSMLAEDIRVREYLKKKLKSASVGRVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI VYSARPG++IGK+G DIE ++ L + +H+++ E+ KPE +A LIA SI
Sbjct: 61 AKNARITVYSARPGVVIGKRGEDIESLKADLQRLMGVPVHVNIEEIRKPETDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
+QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TL+A
Sbjct: 121 SQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLKA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
+IDYGT+ A T YG GIKV+V D +++ + AA
Sbjct: 181 NIDYGTSEAHTTYGVIGIKVWVYKGDMLANGELPPEAA 218
>gi|320540603|ref|ZP_08040253.1| 30S ribosomal subunit protein S3 [Serratia symbiotica str. Tucson]
gi|320029534|gb|EFW11563.1| 30S ribosomal subunit protein S3 [Serratia symbiotica str. Tucson]
Length = 232
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 111/229 (48%), Positives = 158/229 (68%), Gaps = 3/229 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS W+A E+ L D K+R++L L +A V++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWYANTKEFADNLDSDFKVRQFLAKELAKASVSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVDVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS---DSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + + + PAA+ + ++
Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEPAAQPKKQQRK 229
>gi|86158363|ref|YP_465148.1| SSU ribosomal protein S3P [Anaeromyxobacter dehalogenans 2CP-C]
gi|123723040|sp|Q2IJ82|RS3_ANADE RecName: Full=30S ribosomal protein S3
gi|85774874|gb|ABC81711.1| SSU ribosomal protein S3P [Anaeromyxobacter dehalogenans 2CP-C]
Length = 224
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 108/209 (51%), Positives = 155/209 (74%), Gaps = 1/209 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI FRLGV +W+S+W+ Y LHED+K+RE+++ L QAG+++I IER
Sbjct: 1 MGQKVHPIGFRLGVIRSWDSKWY-EEKNYAKWLHEDIKLREFVKEKLGQAGISRIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I V++ARPG++IGK+G IE I+K L +T++E++L+V EV K E +A L+A++I
Sbjct: 60 ANKVKINVHTARPGIVIGKRGAGIETIKKDLQGLTDNEVYLNVVEVRKAETDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR+ FRRAMK++VQ+A++FGA G++V SGRL G+E++R E Y EGRVPL TLRA
Sbjct: 120 ATQLERRIAFRRAMKKSVQTALKFGAKGIRVACSGRLGGSEMARYEWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVS 209
IDYG A A+T YG G KV++ + +
Sbjct: 180 DIDYGFAEAKTTYGKIGCKVWIMRGEVLP 208
>gi|253998020|ref|YP_003050083.1| 30S ribosomal protein S3 [Methylovorus sp. SIP3-4]
gi|313200087|ref|YP_004038745.1| 30S ribosomal protein S3 [Methylovorus sp. MP688]
gi|253984699|gb|ACT49556.1| ribosomal protein S3 [Methylovorus sp. SIP3-4]
gi|312439403|gb|ADQ83509.1| ribosomal protein S3 [Methylovorus sp. MP688]
Length = 237
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 125/229 (54%), Positives = 166/229 (72%), Gaps = 3/229 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V W+SRW+A + A+L+ D+K+R++L+ L A V+KI+IER
Sbjct: 1 MGQKIHPFGFRLSVQKNWSSRWYANSKNFPAMLNSDIKVRDFLKKKLSHAAVSKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN +I +YSARPG++IGKKG DIE +R L + +HL++ EV KPEI+ATLIA+SI
Sbjct: 61 AKNAKITIYSARPGVVIGKKGEDIESLRSSLQGLMGVPVHLNIEEVRKPEIDATLIAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+RV+FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLEKRVMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVS---DSDSTIPAAEHRVVEKD 226
IDYG A A+T YG GIKV+V + + + +PA + V K
Sbjct: 181 DIDYGVAEAKTTYGIIGIKVWVFKGEVFGTHAEQQAAVPAEPEKKVRKS 229
>gi|197122345|ref|YP_002134296.1| ribosomal protein S3 [Anaeromyxobacter sp. K]
gi|220917127|ref|YP_002492431.1| ribosomal protein S3 [Anaeromyxobacter dehalogenans 2CP-1]
gi|226697661|sp|B4UBA5|RS3_ANASK RecName: Full=30S ribosomal protein S3
gi|254764508|sp|B8J866|RS3_ANAD2 RecName: Full=30S ribosomal protein S3
gi|196172194|gb|ACG73167.1| ribosomal protein S3 [Anaeromyxobacter sp. K]
gi|219954981|gb|ACL65365.1| ribosomal protein S3 [Anaeromyxobacter dehalogenans 2CP-1]
Length = 224
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 108/209 (51%), Positives = 155/209 (74%), Gaps = 1/209 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI FRLGV +W+S+W+ Y LHED+K+RE+++ L QAG+++I IER
Sbjct: 1 MGQKVHPIGFRLGVIRSWDSKWY-EEKNYAKWLHEDIKLREFVKEKLGQAGISRIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I V++ARPG++IGK+G IE I+K L +T++E++L+V EV K E +A L+A++I
Sbjct: 60 ANKVKINVHTARPGIVIGKRGAGIETIKKDLQGLTDNEVYLNVVEVRKAETDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR+ FRRAMK++VQ+A++FGA G++V SGRL G+E++R E Y EGRVPL TLRA
Sbjct: 120 ATQLERRIAFRRAMKKSVQTALKFGAKGIRVACSGRLGGSEMARYEWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVS 209
IDYG A A+T YG G KV++ + +
Sbjct: 180 DIDYGFAEAKTTYGKIGCKVWIMRGEVLP 208
>gi|330432118|gb|AEC17177.1| 30S ribosomal protein S3 [Gallibacterium anatis UMN179]
Length = 235
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 107/225 (47%), Positives = 155/225 (68%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ W+S W+A ++ L D K+R++L L A V++I IER
Sbjct: 1 MGQKVHPHGIRLGIVKPWSSTWYANTQDFADNLDGDFKVRKFLTKELANASVSRITIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+A+SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVAAIAGVPAQINIAEVKKPELDAKLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY TA A T YG G+KV++ + + + + + + + +K
Sbjct: 181 DIDYNTAEANTTYGVIGVKVWIFKGEILGGMAAVMQSEQQQPADK 225
>gi|54022706|ref|YP_116948.1| 30S ribosomal protein S3 [Nocardia farcinica IFM 10152]
gi|61215424|sp|Q5Z1V7|RS3_NOCFA RecName: Full=30S ribosomal protein S3
gi|54014214|dbj|BAD55584.1| putative ribosomal protein S3 [Nocardia farcinica IFM 10152]
Length = 267
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 102/219 (46%), Positives = 148/219 (67%), Gaps = 2/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG+ W SRW+A +Y + ED+ IR+ L +++AG++K+ IERT
Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYADYVKEDVAIRKLLATGMERAGISKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV PE +A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRAELEKLTGKQVQLNILEVKNPESDAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMR-FGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAMR G++V SGRL GAE+SR+E Y EGRVPL TLR
Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRSPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
A IDYG A+T +G G+KV++ D V A+
Sbjct: 180 ADIDYGLYEAKTTFGRIGVKVWIYKGDIVGGKRELTAAS 218
>gi|50122945|ref|YP_052112.1| 30S ribosomal protein S3 [Pectobacterium atrosepticum SCRI1043]
gi|61215521|sp|Q6CZX6|RS3_ERWCT RecName: Full=30S ribosomal protein S3
gi|49613471|emb|CAG76922.1| 30S ribosomal subunit protein S3 [Pectobacterium atrosepticum
SCRI1043]
Length = 233
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 111/230 (48%), Positives = 158/230 (68%), Gaps = 4/230 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS W+A E+ L D K+R+YL L++A V++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWYANTKEFADNLDSDFKVRKYLTKELEKASVSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + + P+A+ + ++
Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPSAQPKKQQRK 230
>gi|329298527|ref|ZP_08255863.1| 30S ribosomal protein S3 [Plautia stali symbiont]
Length = 232
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 111/229 (48%), Positives = 156/229 (68%), Gaps = 3/229 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS WFA E+ L D K+R++L L +A V++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTEEFADNLDSDFKVRQFLNKELAKASVSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARP ++IGKKG D+EK+R ++N+ +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPAIVIGKKGEDVEKLRTVVANIAGVPAQINIAEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS---DSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + + + PAA+ + ++
Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEPAAQPKKQQRK 229
>gi|126736606|ref|ZP_01752346.1| ribosomal protein S3 [Roseobacter sp. CCS2]
gi|126713919|gb|EBA10790.1| ribosomal protein S3 [Roseobacter sp. CCS2]
Length = 233
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 123/227 (54%), Positives = 172/227 (75%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+NPI RL VN TW+SRW+A +YG LL EDL+I+++++ Q+GV++++IER
Sbjct: 1 MGNKVNPIGMRLQVNRTWDSRWYADTKDYGDLLLEDLRIKDFIKKECAQSGVSRVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +++ARPG+IIGKKG DIE +RKKL+ +T+SE+HL++ EV KPE++A L+A+SI
Sbjct: 61 HKKCRVTIHAARPGVIIGKKGADIEGLRKKLAALTDSELHLNIVEVRKPELDAALVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLERRV FRRAMKR+VQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 GQQLERRVSFRRAMKRSVQNAMRMGALGIRVNLAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDY A T YG GIKV++ + E+ + D + +H +++ +
Sbjct: 181 DIDYALYEAMTPYGIIGIKVFIY-KGEIMEHDPSAHDRKHAELQEGA 226
>gi|94500987|ref|ZP_01307512.1| ribosomal protein S3 [Oceanobacter sp. RED65]
gi|94426927|gb|EAT11910.1| ribosomal protein S3 [Oceanobacter sp. RED65]
Length = 230
Score = 269 bits (688), Expect = 2e-70, Method: Composition-based stats.
Identities = 104/226 (46%), Positives = 154/226 (68%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ NS W+A Y L D+++R ++ L++A V+K+ IER
Sbjct: 1 MGQKVHPTGIRLGITKDHNSVWYAGKDTYADQLLTDIQVRSMIEKRLEKASVSKVTIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +I +++ARPG++IGKKG D++ +RK +++M +HL++ E+ KP+++A L+AQS+
Sbjct: 61 AQTAKITIHTARPGIVIGKKGEDVDALRKDVADMMGIPVHLNIEEIRKPDLDAKLVAQSV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA+G+K+ GRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ANQLERRVMFRRAMKRAVQNAMRGGAEGIKIQVGGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDY T A T YG G+KV++ + + D A+ +K
Sbjct: 181 DIDYATYEAHTTYGVIGVKVWIFKGEILGGIDEVRARAKSGGAKKQ 226
>gi|52308149|gb|AAU38649.1| RpsC protein [Mannheimia succiniciproducens MBEL55E]
Length = 246
Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats.
Identities = 110/230 (47%), Positives = 152/230 (66%), Gaps = 6/230 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP RLG+ W+S WFA ++ + L D K+R++L L A V++I IER
Sbjct: 12 MGQKVNPHGIRLGIVKPWSSTWFANTQDFASNLDGDFKVRKFLNKELANASVSRITIERP 71
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+A SI
Sbjct: 72 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVAKIAGVPAQINIAEVKKPELDAKLVADSI 131
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 132 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 191
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD------SDSTIPAAEHRVVE 224
IDY T+ A T YG G+KV++ + + PAA +
Sbjct: 192 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAIAQQPEQQPAAPKKAPR 241
>gi|292492427|ref|YP_003527866.1| ribosomal protein S3 [Nitrosococcus halophilus Nc4]
gi|291581022|gb|ADE15479.1| ribosomal protein S3 [Nitrosococcus halophilus Nc4]
Length = 223
Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats.
Identities = 109/217 (50%), Positives = 156/217 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS+W+A S++ LL+ DL +R +L L A V+ I I+R
Sbjct: 1 MGQKVHPTGIRLGIVKDWNSKWYADSSQFSDLLNNDLGVRSHLTKKLSHALVSNIQIDRP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+N RI +++ARPG++IGKKG DI +R+++S M +H+++ E+ KPE++ATL+A ++
Sbjct: 61 ARNARITIHTARPGIVIGKKGEDINNLRQEVSEMMGIPVHINIQEIRKPELDATLVAANV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERR++FRRAMKRAV +AMR GA G+++ SGRLNGAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRIMFRRAMKRAVTNAMRVGAQGIRIKVSGRLNGAEIARNEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
+IDYG A A+T YG G+KV++ + D + A
Sbjct: 181 NIDYGFAEAKTTYGVLGVKVWIFKGEVFEQPDQQVTA 217
>gi|258543827|ref|ZP_05704061.1| 30S ribosomal protein S3 [Cardiobacterium hominis ATCC 15826]
gi|258520916|gb|EEV89775.1| 30S ribosomal protein S3 [Cardiobacterium hominis ATCC 15826]
Length = 245
Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats.
Identities = 107/227 (47%), Positives = 157/227 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI FRLGV+ W S+W+A G +Y L +D ++RE+++ L A V++I IER
Sbjct: 6 MGQKVHPIGFRLGVSKDWVSKWYAEGKDYANFLEKDFEVREFIRKKLAHASVSQIQIERP 65
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I +++ARPG++IG+KG DIE +++++S++ +++ E+ +PE++A L+A I
Sbjct: 66 RNGAQITIFTARPGIVIGRKGEDIEVLKQEISSIMGVPTSVNIEEIRRPELDAYLVADGI 125
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLERRV+FRRAMKR+V S MR GA G+KV +GRLNGAE++RTE Y EGRVPL TLRA
Sbjct: 126 AKQLERRVMFRRAMKRSVASTMRLGAAGIKVSIAGRLNGAEIARTEWYREGRVPLHTLRA 185
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYG A A T YG G+KV++ + + D+ EK +
Sbjct: 186 DIDYGFAEAHTTYGVIGVKVWIFKGENLEGLDANGNVVGEVPEEKRA 232
>gi|167564411|ref|ZP_02357327.1| 30S ribosomal protein S3 [Burkholderia oklahomensis EO147]
gi|167571557|ref|ZP_02364431.1| 30S ribosomal protein S3 [Burkholderia oklahomensis C6786]
Length = 266
Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats.
Identities = 116/229 (50%), Positives = 165/229 (72%), Gaps = 2/229 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V+ W SRW+A + + A+L ED+ +REYL+ LK A V +++IER
Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNNNFAAMLQEDIGVREYLKKKLKNASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI ++S+RPG++IGKKG DIE ++ +L +H+++ E+ KPE +A LIA SI
Sbjct: 61 AKNARITIFSSRPGVVIGKKGEDIELLKTELQRRMGVPVHVNIEEIRKPETDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLERR++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI--PAAEHRVVEKDS 227
IDY T+ A+T YG G+KV+V D + +D+ + AE + +++
Sbjct: 181 DIDYATSEAKTTYGVIGVKVWVYKGDTLGRNDAPVVEEVAEDKRPRRNA 229
>gi|27364209|ref|NP_759737.1| 30S ribosomal protein S3 [Vibrio vulnificus CMCP6]
gi|37678565|ref|NP_933174.1| 30S ribosomal protein S3 [Vibrio vulnificus YJ016]
gi|320157595|ref|YP_004189974.1| 30S ribosomal protein S3p (S3e) [Vibrio vulnificus MO6-24/O]
gi|29427440|sp|Q8DE45|RS3_VIBVU RecName: Full=30S ribosomal protein S3
gi|61215668|sp|Q7MPI2|RS3_VIBVY RecName: Full=30S ribosomal protein S3
gi|27360327|gb|AAO09264.1| ribosomal protein S3 [Vibrio vulnificus CMCP6]
gi|37197305|dbj|BAC93145.1| ribosomal protein S3 [Vibrio vulnificus YJ016]
gi|319932907|gb|ADV87771.1| SSU ribosomal protein S3p (S3e) [Vibrio vulnificus MO6-24/O]
Length = 233
Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats.
Identities = 108/224 (48%), Positives = 154/224 (68%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WN+ WFA ++ L D K+R++L L +A +++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNATWFANTKDFADNLDGDFKVRQFLTKELSKASLSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+ SI
Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRTAVAKIAGVPAQINIAEVRKPELDAQLVGDSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
IDY T+ A T YG GIKV++ + + + AAE + +
Sbjct: 181 DIDYATSSAHTTYGVIGIKVWIFKGEILGGMPAATEAAEPKADK 224
>gi|270264367|ref|ZP_06192633.1| 30S ribosomal protein S3 [Serratia odorifera 4Rx13]
gi|270041503|gb|EFA14601.1| 30S ribosomal protein S3 [Serratia odorifera 4Rx13]
Length = 232
Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats.
Identities = 111/229 (48%), Positives = 158/229 (68%), Gaps = 3/229 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS W+A E+ L D K+R++L L +A V++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWYANTKEFADNLDSDFKVRQFLIKELAKASVSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS---DSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + + + PAA+ + ++
Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEPAAQPKKQQRK 229
>gi|33152952|ref|NP_874305.1| 30S ribosomal protein S3 [Haemophilus ducreyi 35000HP]
gi|61215714|sp|Q7VKD7|RS3_HAEDU RecName: Full=30S ribosomal protein S3
gi|33149177|gb|AAP96694.1| 30S ribosomal protein S3 [Haemophilus ducreyi 35000HP]
Length = 234
Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats.
Identities = 113/232 (48%), Positives = 154/232 (66%), Gaps = 6/232 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS WFA ++ L D K+R++L L A V++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTQDFADNLDGDFKVRKFLNKELANASVSRIIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R +S + +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVSQIAGVPAQINIAEVKKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE------VSDSDSTIPAAEHRVVEKD 226
IDY TA A T YG G+KV++ + V +S+ A + K
Sbjct: 181 DIDYNTAEAHTTYGVIGVKVWIFKGEILGGMAAVIESEQQPAAQPKKQARKG 232
>gi|121603126|ref|YP_980455.1| 30S ribosomal protein S3 [Polaromonas naphthalenivorans CJ2]
gi|152060890|sp|A1VIQ6|RS3_POLNA RecName: Full=30S ribosomal protein S3
gi|120592095|gb|ABM35534.1| SSU ribosomal protein S3P [Polaromonas naphthalenivorans CJ2]
Length = 295
Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats.
Identities = 121/225 (53%), Positives = 164/225 (72%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRL ++ W+SRW+A ++ +L ED+K+REYL+ LK A V+++LIER
Sbjct: 1 MGQKINPTGFRLSISRNWSSRWYANNRDFAGMLAEDIKVREYLKKKLKNAAVSRVLIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI ++SARPG++IGKKG DIE ++K+LS + +++ EV KPEI+A LIA SI
Sbjct: 61 AKNARITIFSARPGVVIGKKGEDIEALKKELSRQLGVPVAVNIEEVRKPEIDAKLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++R E Y EGRVPL TLRA
Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRLGALGIKIMSSGRLNGIEIARCEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDYGT+ A+T YG G+KV+V D + +D T E+
Sbjct: 181 DIDYGTSEAQTTYGIIGVKVWVYKGDTLGRNDGTGAKMIEVADEE 225
>gi|317401543|gb|EFV82172.1| 30S ribosomal protein S3 [Achromobacter xylosoxidans C54]
Length = 263
Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats.
Identities = 117/212 (55%), Positives = 161/212 (75%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V W+SRWFA +G++L ED+++REYL+ LK A V +++IER
Sbjct: 1 MGQKIHPTGFRLAVTRNWSSRWFADDKAFGSMLAEDIRVREYLKKKLKSASVGRVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI VYSARPG++IGK+G DIE ++ L + +H+++ E+ KPE +A LIA SI
Sbjct: 61 AKNARITVYSARPGVVIGKRGEDIESLKADLQRLMGVPVHVNIEEIRKPETDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
+QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TL+A
Sbjct: 121 SQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLKA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
+IDYGT+ A T YG GIKV+V D +++ +
Sbjct: 181 NIDYGTSEAHTTYGVIGIKVWVYKGDMLANGE 212
>gi|89893223|ref|YP_516710.1| 30S ribosomal protein S3 [Desulfitobacterium hafniense Y51]
gi|123091860|sp|Q250M6|RS3_DESHY RecName: Full=30S ribosomal protein S3
gi|89332671|dbj|BAE82266.1| 30S ribosomal protein S3 [Desulfitobacterium hafniense Y51]
Length = 219
Score = 269 bits (687), Expect = 2e-70, Method: Composition-based stats.
Identities = 105/212 (49%), Positives = 150/212 (70%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+G+ W RWFA Y LLHEDLK+R++++ L+QAGV K+ IER
Sbjct: 1 MGQKVNPKGLRVGIIRDWEGRWFAD-KNYLELLHEDLKVRKFVKTKLQQAGVPKVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ +++A+PG++IG+ GT++E +RK+L MT ++ +++ EV KPE++A L+A+S+
Sbjct: 60 ANRVKVSIHAAKPGIVIGRGGTEVENLRKQLEAMTGKQVAVNIVEVKKPELDAQLVAESV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+RV FRRAMK+ VQ MR G G+K+ SGRL GAE++RTE Y EG+VPL TLRA
Sbjct: 120 AQQLEKRVSFRRAMKQTVQRTMRQGGQGIKISCSGRLGGAEIARTEWYSEGKVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
IDYG A A T YG G+KV++ + +
Sbjct: 180 DIDYGFAEANTTYGKIGVKVWIYKGEVLPAKK 211
>gi|238921436|ref|YP_002934951.1| 30S ribosomal protein S3 [Edwardsiella ictaluri 93-146]
gi|294638046|ref|ZP_06716306.1| ribosomal protein S3 [Edwardsiella tarda ATCC 23685]
gi|259495245|sp|C5BGL9|RS3_EDWI9 RecName: Full=30S ribosomal protein S3
gi|238871005|gb|ACR70716.1| 30S ribosomal protein S3, putative [Edwardsiella ictaluri 93-146]
gi|291088838|gb|EFE21399.1| ribosomal protein S3 [Edwardsiella tarda ATCC 23685]
Length = 233
Score = 269 bits (687), Expect = 3e-70, Method: Composition-based stats.
Identities = 111/230 (48%), Positives = 157/230 (68%), Gaps = 4/230 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS W+A E+ L D K+R++L L++A V++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWYANTKEFADNLDSDFKVRQFLNKELEKASVSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK ++ + +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKGVAEIAGVPAQINIAEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + + PAA+ + ++
Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRK 230
>gi|22127865|ref|NP_671288.1| 30S ribosomal protein S3 [Yersinia pestis KIM 10]
gi|45440073|ref|NP_991612.1| 30S ribosomal protein S3 [Yersinia pestis biovar Microtus str.
91001]
gi|51597982|ref|YP_072173.1| 30S ribosomal protein S3 [Yersinia pseudotuberculosis IP 32953]
gi|108814013|ref|YP_649780.1| 30S ribosomal protein S3 [Yersinia pestis Nepal516]
gi|123444092|ref|YP_001008062.1| 30S ribosomal protein S3 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|145597458|ref|YP_001161533.1| 30S ribosomal protein S3 [Yersinia pestis Pestoides F]
gi|150260737|ref|ZP_01917465.1| 30S ribosomal protein S3 [Yersinia pestis CA88-4125]
gi|153949533|ref|YP_001402857.1| 30S ribosomal protein S3 [Yersinia pseudotuberculosis IP 31758]
gi|162419812|ref|YP_001605181.1| 30S ribosomal protein S3 [Yersinia pestis Angola]
gi|165927901|ref|ZP_02223733.1| ribosomal protein S3 [Yersinia pestis biovar Orientalis str.
F1991016]
gi|166010543|ref|ZP_02231441.1| ribosomal protein S3 [Yersinia pestis biovar Antiqua str. E1979001]
gi|166213311|ref|ZP_02239346.1| ribosomal protein S3 [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167419228|ref|ZP_02310981.1| ribosomal protein S3 [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167425626|ref|ZP_02317379.1| ribosomal protein S3 [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|170022550|ref|YP_001719055.1| 30S ribosomal protein S3 [Yersinia pseudotuberculosis YPIII]
gi|186897178|ref|YP_001874290.1| 30S ribosomal protein S3 [Yersinia pseudotuberculosis PB1/+]
gi|218927421|ref|YP_002345296.1| 30S ribosomal protein S3 [Yersinia pestis CO92]
gi|229836303|ref|ZP_04456470.1| 30S ribosomal subunit protein S3 [Yersinia pestis Pestoides A]
gi|229840073|ref|ZP_04460232.1| 30S ribosomal subunit protein S3 [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229842155|ref|ZP_04462310.1| 30S ribosomal subunit protein S3 [Yersinia pestis biovar Orientalis
str. India 195]
gi|229904545|ref|ZP_04519656.1| 30S ribosomal subunit protein S3 [Yersinia pestis Nepal516]
gi|238752681|ref|ZP_04614152.1| 30S ribosomal protein S3 [Yersinia rohdei ATCC 43380]
gi|238758770|ref|ZP_04619944.1| 30S ribosomal protein S3 [Yersinia aldovae ATCC 35236]
gi|238763724|ref|ZP_04624683.1| 30S ribosomal protein S3 [Yersinia kristensenii ATCC 33638]
gi|238783175|ref|ZP_04627201.1| 30S ribosomal protein S3 [Yersinia bercovieri ATCC 43970]
gi|238788904|ref|ZP_04632694.1| 30S ribosomal protein S3 [Yersinia frederiksenii ATCC 33641]
gi|238792944|ref|ZP_04636574.1| 30S ribosomal protein S3 [Yersinia intermedia ATCC 29909]
gi|238797232|ref|ZP_04640733.1| 30S ribosomal protein S3 [Yersinia mollaretii ATCC 43969]
gi|270488238|ref|ZP_06205312.1| ribosomal protein S3 [Yersinia pestis KIM D27]
gi|294502294|ref|YP_003566356.1| 30S ribosomal protein S3 [Yersinia pestis Z176003]
gi|332163253|ref|YP_004299830.1| 30S ribosomal protein S3 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|27734519|sp|Q8ZJA6|RS3_YERPE RecName: Full=30S ribosomal protein S3
gi|61215489|sp|Q664S7|RS3_YERPS RecName: Full=30S ribosomal protein S3
gi|123073065|sp|Q1CCV0|RS3_YERPN RecName: Full=30S ribosomal protein S3
gi|152060915|sp|A1JS29|RS3_YERE8 RecName: Full=30S ribosomal protein S3
gi|152060916|sp|A4TGZ8|RS3_YERPP RecName: Full=30S ribosomal protein S3
gi|189045347|sp|A7FNM9|RS3_YERP3 RecName: Full=30S ribosomal protein S3
gi|226697779|sp|B2K5M4|RS3_YERPB RecName: Full=30S ribosomal protein S3
gi|226697780|sp|A9R902|RS3_YERPG RecName: Full=30S ribosomal protein S3
gi|226697781|sp|B1JIW7|RS3_YERPY RecName: Full=30S ribosomal protein S3
gi|21961000|gb|AAM87539.1|AE014002_12 30S ribosomal subunit protein S3 [Yersinia pestis KIM 10]
gi|45434928|gb|AAS60489.1| 30S ribosomal protein S3 [Yersinia pestis biovar Microtus str.
91001]
gi|51591264|emb|CAH22930.1| 30S ribosomal protein S3 [Yersinia pseudotuberculosis IP 32953]
gi|108777661|gb|ABG20180.1| SSU ribosomal protein S3P [Yersinia pestis Nepal516]
gi|115346032|emb|CAL18898.1| 30S ribosomal protein S3 [Yersinia pestis CO92]
gi|122091053|emb|CAL13936.1| 30S ribosomal protein S3 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|145209154|gb|ABP38561.1| SSU ribosomal protein S3P [Yersinia pestis Pestoides F]
gi|149290145|gb|EDM40222.1| 30S ribosomal protein S3 [Yersinia pestis CA88-4125]
gi|152961028|gb|ABS48489.1| ribosomal protein S3 [Yersinia pseudotuberculosis IP 31758]
gi|162352627|gb|ABX86575.1| ribosomal protein S3 [Yersinia pestis Angola]
gi|165920177|gb|EDR37478.1| ribosomal protein S3 [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165990633|gb|EDR42934.1| ribosomal protein S3 [Yersinia pestis biovar Antiqua str. E1979001]
gi|166205609|gb|EDR50089.1| ribosomal protein S3 [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166963222|gb|EDR59243.1| ribosomal protein S3 [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167055316|gb|EDR65110.1| ribosomal protein S3 [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|169749084|gb|ACA66602.1| ribosomal protein S3 [Yersinia pseudotuberculosis YPIII]
gi|186700204|gb|ACC90833.1| ribosomal protein S3 [Yersinia pseudotuberculosis PB1/+]
gi|229678663|gb|EEO74768.1| 30S ribosomal subunit protein S3 [Yersinia pestis Nepal516]
gi|229690465|gb|EEO82519.1| 30S ribosomal subunit protein S3 [Yersinia pestis biovar Orientalis
str. India 195]
gi|229696439|gb|EEO86486.1| 30S ribosomal subunit protein S3 [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229706371|gb|EEO92378.1| 30S ribosomal subunit protein S3 [Yersinia pestis Pestoides A]
gi|238698026|gb|EEP90784.1| 30S ribosomal protein S3 [Yersinia kristensenii ATCC 33638]
gi|238703067|gb|EEP95610.1| 30S ribosomal protein S3 [Yersinia aldovae ATCC 35236]
gi|238709108|gb|EEQ01355.1| 30S ribosomal protein S3 [Yersinia rohdei ATCC 43380]
gi|238715971|gb|EEQ07957.1| 30S ribosomal protein S3 [Yersinia bercovieri ATCC 43970]
gi|238718869|gb|EEQ10684.1| 30S ribosomal protein S3 [Yersinia mollaretii ATCC 43969]
gi|238722931|gb|EEQ14581.1| 30S ribosomal protein S3 [Yersinia frederiksenii ATCC 33641]
gi|238727798|gb|EEQ19322.1| 30S ribosomal protein S3 [Yersinia intermedia ATCC 29909]
gi|262360374|gb|ACY57095.1| 30S ribosomal protein S3 [Yersinia pestis D106004]
gi|262364326|gb|ACY60883.1| 30S ribosomal protein S3 [Yersinia pestis D182038]
gi|270336742|gb|EFA47519.1| ribosomal protein S3 [Yersinia pestis KIM D27]
gi|294352753|gb|ADE63094.1| 30S ribosomal protein S3 [Yersinia pestis Z176003]
gi|318607738|emb|CBY29236.1| SSU ribosomal protein S3p (S3e) [Yersinia enterocolitica subsp.
palearctica Y11]
gi|320013348|gb|ADV96919.1| 30S ribosomal subunit protein S3 [Yersinia pestis biovar Medievalis
str. Harbin 35]
gi|325667483|gb|ADZ44127.1| 30S ribosomal protein S3 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330861849|emb|CBX72020.1| 30S ribosomal protein S3 [Yersinia enterocolitica W22703]
Length = 232
Score = 269 bits (687), Expect = 3e-70, Method: Composition-based stats.
Identities = 111/229 (48%), Positives = 158/229 (68%), Gaps = 3/229 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS W+A E+ L D K+R++L L +A V++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKAWNSTWYANTKEFADNLDSDFKVRQFLTKELAKASVSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS---DSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + + + PAA+ + ++
Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEPAAQPKKQQRK 229
>gi|325529684|gb|EGD06547.1| 30S ribosomal protein S3 [Burkholderia sp. TJI49]
Length = 266
Score = 269 bits (687), Expect = 3e-70, Method: Composition-based stats.
Identities = 116/229 (50%), Positives = 166/229 (72%), Gaps = 2/229 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V+ W SRW+A + + A+L ED+ +REYL+ LK A V +++IER
Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNNNFAAMLQEDIGVREYLKKKLKNASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI ++S+RPG++IGKKG DIE+++ +L +H+++ E+ KPE +A LIA SI
Sbjct: 61 AKNARITIFSSRPGVVIGKKGEDIEQLKTELQRRMGVPVHVNIEEIRKPETDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLERR++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI--PAAEHRVVEKDS 227
IDY T+ A+T YG G+KV+V D + +D+ + AE + +++
Sbjct: 181 DIDYATSEAKTTYGIIGVKVWVYKGDTLGRNDAPVVEEVAEDKRPRRNA 229
>gi|212708987|ref|ZP_03317115.1| hypothetical protein PROVALCAL_00019 [Providencia alcalifaciens DSM
30120]
gi|261346929|ref|ZP_05974573.1| ribosomal protein S3 [Providencia rustigianii DSM 4541]
gi|212688353|gb|EEB47881.1| hypothetical protein PROVALCAL_00019 [Providencia alcalifaciens DSM
30120]
gi|282564994|gb|EFB70529.1| ribosomal protein S3 [Providencia rustigianii DSM 4541]
Length = 233
Score = 269 bits (687), Expect = 3e-70, Method: Composition-based stats.
Identities = 111/230 (48%), Positives = 160/230 (69%), Gaps = 4/230 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS W+A +E+ L D K+R+YL L +A +++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWYANTNEFADNLDSDFKVRQYLNKELAKASISRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKTVADIAGVPAQINIAEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
+ QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 SSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + + + PAA+ + ++
Sbjct: 181 DIDYNTSEAHTTYGVLGVKVWIFKGEILGGMAAVEQAEKPAAQPKKQQRK 230
>gi|256821668|ref|YP_003145631.1| 30S ribosomal protein S3 [Kangiella koreensis DSM 16069]
gi|256795207|gb|ACV25863.1| ribosomal protein S3 [Kangiella koreensis DSM 16069]
Length = 233
Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats.
Identities = 107/226 (47%), Positives = 153/226 (67%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ + W+A ++ L D+ IR++L LK A ++++ IER
Sbjct: 1 MGQKVHPTGIRLGIVKKHTATWYAERGDFADYLESDINIRKWLFKELKNASISRVDIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ +++ARPG++IGKKG DIEK+R K++NM +SV +V KPE++A L+ ++
Sbjct: 61 AKAIRVTIHTARPGIVIGKKGEDIEKLRAKIANMAGVSAQVSVEQVRKPELDAQLVGDNV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV+FRRAMKRAVQ+AMR GA+G+K+ SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRLGAEGIKIEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDY T+ A T YG GIKV++ + + + P + + +
Sbjct: 181 DIDYATSEALTTYGIIGIKVWIFKGEVLPGQEKVEPKEDKKPRRRK 226
>gi|260772102|ref|ZP_05881019.1| SSU ribosomal protein S3p (S3e) [Vibrio metschnikovii CIP 69.14]
gi|260612969|gb|EEX38171.1| SSU ribosomal protein S3p (S3e) [Vibrio metschnikovii CIP 69.14]
Length = 232
Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats.
Identities = 108/224 (48%), Positives = 154/224 (68%), Gaps = 1/224 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WN+ WFA ++ L D K+R+YL L +A +++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNATWFANTKDFADNLDGDFKVRQYLTKELAKASLSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ + ++++EV KPE++ L+A SI
Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRAAVAKIAGVPAQINISEVRKPELDGQLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
IDY T+ A T YG G+KV++ + E+ A E + +
Sbjct: 181 DIDYATSSAHTTYGVIGVKVWIF-KGEILGGMPAANAVEPKADK 223
>gi|320173955|gb|EFW49131.1| SSU ribosomal protein S3p (S3e) [Shigella dysenteriae CDC 74-1112]
Length = 233
Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats.
Identities = 113/230 (49%), Positives = 157/230 (68%), Gaps = 4/230 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS WFA E+ L D K+R+YL L +A V++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + + PAA+ + ++
Sbjct: 181 DIDYNTSEAYTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRK 230
>gi|74316429|ref|YP_314169.1| 30S ribosomal protein S3 [Thiobacillus denitrificans ATCC 25259]
gi|91207848|sp|Q3SLP3|RS3_THIDA RecName: Full=30S ribosomal protein S3
gi|74055924|gb|AAZ96364.1| ribosomal protein S3 [Thiobacillus denitrificans ATCC 25259]
Length = 234
Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats.
Identities = 118/226 (52%), Positives = 163/226 (72%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+PI FRLGV W ++W+ + L ED+K+R+YL+ L A V+K+LIER
Sbjct: 1 MGQKIHPIGFRLGVQRIWTAKWYGSNRNFSDTLLEDIKVRDYLKKKLSHASVSKVLIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI ++S RPG++IGKKG DIE +R +L+ + + +H+++ EV KPE +A ++A I
Sbjct: 61 AKNARITIFSGRPGVVIGKKGEDIEVLRGELARLMSVPVHVNIEEVRKPETDAQIVADGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+RV+FRRAMKRA+Q+AMR GA G+K+++SGRLNGAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLEKRVMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDYG A A+T YG GIKV+V D ++ + A + + +K
Sbjct: 181 EIDYGFAEAKTTYGIIGIKVWVYKGDALTRGEQPAAAEQEKRGKKS 226
>gi|161523435|ref|YP_001578447.1| 30S ribosomal protein S3 [Burkholderia multivorans ATCC 17616]
gi|189351792|ref|YP_001947420.1| 30S ribosomal protein S3 [Burkholderia multivorans ATCC 17616]
gi|221201571|ref|ZP_03574609.1| 30S ribosomal protein S3 [Burkholderia multivorans CGD2M]
gi|221207354|ref|ZP_03580364.1| 30S ribosomal protein S3 [Burkholderia multivorans CGD2]
gi|221213492|ref|ZP_03586467.1| 30S ribosomal protein S3 [Burkholderia multivorans CGD1]
gi|254253511|ref|ZP_04946829.1| 30S ribosomal protein S3 [Burkholderia dolosa AUO158]
gi|226697675|sp|A9ADJ9|RS3_BURM1 RecName: Full=30S ribosomal protein S3
gi|124896120|gb|EAY70000.1| 30S ribosomal protein S3 [Burkholderia dolosa AUO158]
gi|160340864|gb|ABX13950.1| ribosomal protein S3 [Burkholderia multivorans ATCC 17616]
gi|189335814|dbj|BAG44884.1| small subunit ribosomal protein S3 [Burkholderia multivorans ATCC
17616]
gi|221166944|gb|EED99415.1| 30S ribosomal protein S3 [Burkholderia multivorans CGD1]
gi|221172942|gb|EEE05379.1| 30S ribosomal protein S3 [Burkholderia multivorans CGD2]
gi|221178387|gb|EEE10796.1| 30S ribosomal protein S3 [Burkholderia multivorans CGD2M]
Length = 266
Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats.
Identities = 116/229 (50%), Positives = 165/229 (72%), Gaps = 2/229 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V+ W SRW+A + + A+L ED+ +REYL+ LK A V +++IER
Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNNNFAAMLQEDIGVREYLKKKLKNASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI ++S+RPG++IGKKG DIE ++ +L +H+++ E+ KPE +A LIA SI
Sbjct: 61 AKNARITIFSSRPGVVIGKKGEDIELLKTELQRRMGVPVHVNIEEIRKPETDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLERR++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI--PAAEHRVVEKDS 227
IDY T+ A+T YG G+KV+V D + +D+ + AE + +++
Sbjct: 181 DIDYATSEAKTTYGIIGVKVWVYKGDTLGRNDAPVVEEVAEDKRPRRNA 229
>gi|253991682|ref|YP_003043038.1| 30S ribosomal protein S3 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253783132|emb|CAQ86297.1| 30S ribosomal protein S3 [Photorhabdus asymbiotica]
Length = 233
Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats.
Identities = 111/230 (48%), Positives = 158/230 (68%), Gaps = 4/230 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS W+A E+ L D K+R+YL L +A +++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWYANTKEFADNLDSDFKVRQYLNKELAKASISRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK ++ + ++++EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKTVAEIAGVPAQINISEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + + + PAA+ + ++
Sbjct: 181 DIDYNTSEAHTTYGVLGVKVWIFKGEILGGMAAVEQAEKPAAQPKKQQRK 230
>gi|120609047|ref|YP_968725.1| 30S ribosomal protein S3 [Acidovorax citrulli AAC00-1]
gi|152060836|sp|A1TJ13|RS3_ACIAC RecName: Full=30S ribosomal protein S3
gi|120587511|gb|ABM30951.1| SSU ribosomal protein S3P [Acidovorax citrulli AAC00-1]
Length = 293
Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats.
Identities = 124/219 (56%), Positives = 165/219 (75%), Gaps = 2/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V+ W SRW+A ++ +L ED+K+REYL+ LK A V++ILIER
Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNRDFAGMLAEDIKVREYLKAKLKNAAVSRILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI +YSARPG++IGKKG DIE ++K+L++ + +++ EV KPEI+A LIA SI
Sbjct: 61 AKNARITIYSARPGVVIGKKGEDIENLKKELASRLGVPVAVNIEEVRKPEIDAKLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDYGT+ A T YG G+KV+V D + +D +PA E
Sbjct: 181 DIDYGTSEAFTTYGVIGLKVWVYKGDTLGRND--LPAVE 217
>gi|117620103|ref|YP_854847.1| ribosomal protein S3 [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
gi|152060841|sp|A0KF27|RS3_AERHH RecName: Full=30S ribosomal protein S3
gi|117561510|gb|ABK38458.1| ribosomal protein S3 [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
Length = 237
Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats.
Identities = 107/210 (50%), Positives = 149/210 (70%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS WFA ++ L+ D ++R++L LK A ++KI IER
Sbjct: 1 MGQKVHPNGIRLGITKPWNSTWFANTKDFADNLYSDFQVRQFLTKELKNASLSKITIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK ++ + ++++EV KPE++ L+A SI
Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRKAVAAIAGVPAQINISEVRKPELDGKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210
IDY T+ A T YG G+KV++ + +
Sbjct: 181 DIDYATSEAHTTYGVIGVKVWIFKGEVLGG 210
>gi|89076318|ref|ZP_01162659.1| 30S ribosomal protein S3 [Photobacterium sp. SKA34]
gi|90581684|ref|ZP_01237472.1| 30S ribosomal protein S3 [Vibrio angustum S14]
gi|89048022|gb|EAR53611.1| 30S ribosomal protein S3 [Photobacterium sp. SKA34]
gi|90437099|gb|EAS62302.1| 30S ribosomal protein S3 [Vibrio angustum S14]
Length = 229
Score = 268 bits (686), Expect = 3e-70, Method: Composition-based stats.
Identities = 109/227 (48%), Positives = 154/227 (67%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WN+ WFA E+ L D K+R++L L +A +++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNTTWFANSQEFADNLDGDFKVRQFLTKELAKASLSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++ L+A SI
Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDGQLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
+ QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 SSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDY T+ A T YG G+KV++ + + P AE ++ S
Sbjct: 181 DIDYATSSAHTQYGVIGVKVWIFKGEVLGGMPVEEPKAEKPKKQRKS 227
>gi|260770919|ref|ZP_05879848.1| SSU ribosomal protein S3p (S3e) [Vibrio furnissii CIP 102972]
gi|260614156|gb|EEX39346.1| SSU ribosomal protein S3p (S3e) [Vibrio furnissii CIP 102972]
gi|315178965|gb|ADT85879.1| 30S ribosomal protein S3 [Vibrio furnissii NCTC 11218]
Length = 233
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 107/224 (47%), Positives = 153/224 (68%), Gaps = 1/224 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WN+ WFA ++ L D K+R++L L +A +++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNATWFANTKDFADNLDGDFKVRQFLTKELSKASLSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++ L+A SI
Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRTAVAKIAGVPAQINIAEVRKPELDGQLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
IDY T+ A T YG G+KV++ + E+ A E + +
Sbjct: 181 DIDYATSSAHTTYGVIGVKVWIF-KGEILGGMPAANAVEPKADK 223
>gi|257065027|ref|YP_003144699.1| SSU ribosomal protein S3P [Slackia heliotrinireducens DSM 20476]
gi|256792680|gb|ACV23350.1| SSU ribosomal protein S3P [Slackia heliotrinireducens DSM 20476]
Length = 244
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 108/219 (49%), Positives = 151/219 (68%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+ P FRLG+ W SRW+A +Y L DL IR++L+ L++A V+KI IER
Sbjct: 1 MGQKVMPTGFRLGITEDWRSRWYAD-KDYAKNLENDLAIRKFLEKQLEKAAVSKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+II+ +ARPG++IGKKG +IE +RK ++ + N +++ V EV +PE++A L+A+S+
Sbjct: 60 GDKIKIIITTARPGVVIGKKGAEIENLRKDVAKVANGAVNIEVIEVKRPELDAVLVAKSV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRAM++AVQSA + GA G+++ SGRL GAE+SR E Y EGRVPL TLRA
Sbjct: 120 AEQLEGRVAFRRAMRKAVQSARKSGAQGIRIQCSGRLGGAEMSRREWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDYG A A T G+ G+KV++ + + PA E
Sbjct: 180 KIDYGFATARTTMGAIGVKVWIYHGEVLPGGKVPQPALE 218
>gi|301630258|ref|XP_002944239.1| PREDICTED: 30S ribosomal protein S3-like [Xenopus (Silurana)
tropicalis]
Length = 291
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 124/219 (56%), Positives = 166/219 (75%), Gaps = 2/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V+ W SRW+A ++ +L ED+K+RE+L+ LK A V++ILIER
Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYASNRDFAGMLAEDIKVREFLKAKLKNAAVSRILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI +YSARPG++IGKKG DIE ++K+L+ + +++ EV KPEI+A LIA SI
Sbjct: 61 AKNARITIYSARPGVVIGKKGEDIENLKKELATRLGVPVAVNIEEVRKPEIDAKLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDYGT+ A+T YG G+KV+V D + +D +PAAE
Sbjct: 181 DIDYGTSEAKTTYGVIGVKVWVYKGDTLGRND--LPAAE 217
>gi|290477186|ref|YP_003470101.1| 30S ribosomal subunit protein S3 [Xenorhabdus bovienii SS-2004]
gi|289176534|emb|CBJ83343.1| 30S ribosomal subunit protein S3 [Xenorhabdus bovienii SS-2004]
Length = 233
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 111/230 (48%), Positives = 158/230 (68%), Gaps = 4/230 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS W+A E+ L D K+R+YL L +A +++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWYANTKEFADNLDSDFKVRQYLNKELVKASISRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK ++ + +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKTVAEIAGVPAQINIAEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
+ QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 SSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + + + PAA+ + ++
Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQAEKPAAQPKKQQRK 230
>gi|219666496|ref|YP_002456931.1| 30S ribosomal protein S3 [Desulfitobacterium hafniense DCB-2]
gi|254764528|sp|B8G1X2|RS3_DESHD RecName: Full=30S ribosomal protein S3
gi|219536756|gb|ACL18495.1| ribosomal protein S3 [Desulfitobacterium hafniense DCB-2]
Length = 219
Score = 268 bits (686), Expect = 4e-70, Method: Composition-based stats.
Identities = 106/212 (50%), Positives = 150/212 (70%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+G+ W RWFA Y LLHEDLK+R++++ L+QAGV K+ IER
Sbjct: 1 MGQKVNPKGLRVGIIRDWEGRWFAD-KNYLELLHEDLKVRKFVKTKLQQAGVPKVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ +Y+A+PG++IG+ GT++E +RK+L MT ++ +++ EV KPE++A L+A+S+
Sbjct: 60 ANRVKVSIYAAKPGIVIGRGGTEVENLRKQLEAMTGKQVAVNIVEVKKPELDAQLVAESV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+RV FRRAMK+ VQ MR G G+K+ SGRL GAE++RTE Y EG+VPL TLRA
Sbjct: 120 AQQLEKRVSFRRAMKQTVQRTMRQGGQGIKISCSGRLGGAEIARTEWYSEGKVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
IDYG A A T YG G+KV++ + +
Sbjct: 180 DIDYGFAEANTTYGKIGVKVWIYKGEVLPAKK 211
>gi|330827889|ref|YP_004390841.1| 30S ribosomal protein S3 [Aeromonas veronii B565]
gi|328803025|gb|AEB48224.1| 30S ribosomal protein S3 [Aeromonas veronii B565]
Length = 237
Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats.
Identities = 107/210 (50%), Positives = 149/210 (70%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS WFA ++ L+ D ++R++L LK A ++KI IER
Sbjct: 1 MGQKVHPNGIRLGITKPWNSTWFANTKDFADNLYSDFQVRQFLTKELKNASLSKITIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK ++ + ++++EV KPE++ L+A SI
Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRKAVATIAGVPAQINISEVRKPELDGKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210
IDY T+ A T YG G+KV++ + +
Sbjct: 181 DIDYATSEAHTTYGVIGVKVWIFKGEVLGG 210
>gi|268593547|ref|ZP_06127768.1| ribosomal protein S3 [Providencia rettgeri DSM 1131]
gi|291310825|gb|EFE51278.1| ribosomal protein S3 [Providencia rettgeri DSM 1131]
Length = 233
Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats.
Identities = 111/230 (48%), Positives = 160/230 (69%), Gaps = 4/230 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS W+A +E+ L D K+R+YL L +A +++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWYANTNEFADNLDSDYKVRQYLNKELAKASISRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKTVADIAGVPAQINIAEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
+ QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 SSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + + + PAA+ + ++
Sbjct: 181 DIDYNTSEAHTTYGVLGVKVWIFKGEILGGMAAVEQAEKPAAQPKKQQRK 230
>gi|15803841|ref|NP_289875.1| 30S ribosomal protein S3 [Escherichia coli O157:H7 EDL933]
gi|25294470|pir||G85996 30S ribosomal subunit protein S3 [imported] - Escherichia coli
(strain O157:H7, substrain EDL933)
gi|12517946|gb|AAG58435.1|AE005557_4 30S ribosomal subunit protein S3 [Escherichia coli O157:H7 str.
EDL933]
Length = 233
Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats.
Identities = 112/230 (48%), Positives = 156/230 (67%), Gaps = 4/230 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS WFA E+ L D K+R+YL L +A V++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y E RVPL TLRA
Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREXRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + + PAA+ + ++
Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRK 230
>gi|319778737|ref|YP_004129650.1| SSU ribosomal protein S3p (S3e) [Taylorella equigenitalis MCE9]
gi|317108761|gb|ADU91507.1| SSU ribosomal protein S3p (S3e) [Taylorella equigenitalis MCE9]
Length = 296
Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats.
Identities = 119/216 (55%), Positives = 160/216 (74%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRL V WNSRWFA ++G +L +DL++REYL+ LKQA V ++LIER
Sbjct: 1 MGQKVHPTGFRLAVTRNWNSRWFAEDKDFGTMLAQDLRVREYLKRKLKQASVGRVLIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI V++ARPG+IIGK G DI+ ++ L + +H+++ E+ KPE++A LIA SI
Sbjct: 61 EKNARITVFTARPGVIIGKGGDDIDALKSDLQRIMGVPVHINIEEIRKPEVDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+R++FRRAMKRA+Q+AMR GA G+KV ASGRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLEKRIMFRRAMKRAIQNAMRAGAQGIKVAASGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
+DY T+ A T YG GIKV+V D + + ++ +
Sbjct: 181 MVDYATSEALTTYGLLGIKVWVYKGDLLPNGEAPVE 216
>gi|224827023|ref|ZP_03700120.1| ribosomal protein S3 [Lutiella nitroferrum 2002]
gi|224600689|gb|EEG06875.1| ribosomal protein S3 [Lutiella nitroferrum 2002]
Length = 233
Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats.
Identities = 113/226 (50%), Positives = 155/226 (68%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL VN W+S+WFA ++ +L +D+ +R +L+ L A V ++ IER
Sbjct: 1 MGQKIHPTGFRLAVNKNWSSKWFANSHDFADMLKQDIDVRAFLKKRLANASVGRVTIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ RI ++SARPG++IGKKG DIE ++K+L +H+++ EV KPEI+A +IA I
Sbjct: 61 AKSARITIHSARPGVVIGKKGEDIEVLKKELQKRLGVPVHVNIEEVRKPEIDAQIIADGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV+FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 ASQLEKRVMFRRAMKRAMQNAMRMGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
+DY T+ A T YG GIKV+V + P A + K
Sbjct: 181 DVDYATSEANTTYGIIGIKVWVYKGELKPGQVQAAPVATEKKTRKG 226
>gi|58583200|ref|YP_202216.1| 30S ribosomal protein S3 [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84625038|ref|YP_452410.1| 30S ribosomal protein S3 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|166710837|ref|ZP_02242044.1| 30S ribosomal protein S3 [Xanthomonas oryzae pv. oryzicola BLS256]
gi|188575496|ref|YP_001912425.1| 30S ribosomal protein S3 [Xanthomonas oryzae pv. oryzae PXO99A]
gi|289665143|ref|ZP_06486724.1| 30S ribosomal protein S3 [Xanthomonas campestris pv. vasculorum
NCPPB702]
gi|325916493|ref|ZP_08178762.1| SSU ribosomal protein S3P [Xanthomonas vesicatoria ATCC 35937]
gi|75508102|sp|Q5GWU0|RS3_XANOR RecName: Full=30S ribosomal protein S3
gi|123752714|sp|Q2NZZ1|RS3_XANOM RecName: Full=30S ribosomal protein S3
gi|58427794|gb|AAW76831.1| 30S ribosomal protein S3 [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84368978|dbj|BAE70136.1| 30S ribosomal protein S3 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188519948|gb|ACD57893.1| ribosomal protein S3 [Xanthomonas oryzae pv. oryzae PXO99A]
gi|325537282|gb|EGD09009.1| SSU ribosomal protein S3P [Xanthomonas vesicatoria ATCC 35937]
Length = 244
Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats.
Identities = 116/208 (55%), Positives = 156/208 (75%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K++P RLG++ WNS+W+A ++ A L DLK+RE L+ L QAGV+KILIER
Sbjct: 1 MGHKVHPTGIRLGISKDWNSKWYANKGDFAAYLAADLKVREMLRKKLAQAGVSKILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ +++ARPG++IGK+G DIEK+RK++S + H++V EV KPE++A L+A+SI
Sbjct: 61 AKTARVTIHTARPGVVIGKRGEDIEKLRKEVSELMGVPAHINVTEVRKPELDAQLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERR++FRRAMKR+V +AMR GA G+KV +GRLNGAE++R+E Y EGRVPL TLRA
Sbjct: 121 AQQLERRIMFRRAMKRSVGNAMRLGALGIKVNVAGRLNGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
IDYG A A T YG GIKV++ +
Sbjct: 181 DIDYGFAEASTTYGIIGIKVWIYKGEVF 208
>gi|293602629|ref|ZP_06685072.1| 30S ribosomal protein S3 [Achromobacter piechaudii ATCC 43553]
gi|311109606|ref|YP_003982459.1| 30S ribosomal protein S3 [Achromobacter xylosoxidans A8]
gi|292819001|gb|EFF78039.1| 30S ribosomal protein S3 [Achromobacter piechaudii ATCC 43553]
gi|310764295|gb|ADP19744.1| ribosomal protein S3 [Achromobacter xylosoxidans A8]
Length = 264
Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats.
Identities = 117/212 (55%), Positives = 160/212 (75%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V W+SRWFA +G +L ED+++REYL+ LK A V +++IER
Sbjct: 1 MGQKIHPTGFRLAVTRNWSSRWFADDKAFGTMLAEDIRVREYLKKKLKSASVGRVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI VYSARPG++IGK+G DIE ++ L + +H+++ E+ KPE +A LIA SI
Sbjct: 61 AKNARITVYSARPGVVIGKRGEDIESLKADLQRLMGVPVHVNIEEIRKPETDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
+QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TL+A
Sbjct: 121 SQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLKA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
+IDYGT+ A T YG GIKV+V D +++ +
Sbjct: 181 NIDYGTSEAHTTYGVIGIKVWVYKGDMLANGE 212
>gi|89095531|ref|ZP_01168436.1| 30S ribosomal protein S3 [Oceanospirillum sp. MED92]
gi|89080206|gb|EAR59473.1| 30S ribosomal protein S3 [Oceanospirillum sp. MED92]
Length = 226
Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats.
Identities = 111/226 (49%), Positives = 157/226 (69%), Gaps = 1/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ S W+A SEY + L DL++REYL L++A V++I IER
Sbjct: 1 MGQKVHPTGIRLGIVKDHTSVWYADKSEYASKLQNDLQVREYLDKQLEKASVSRIEIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+N +I +++ARPG++IGKKG D+EK+R +S M +H+++ E+ KPE++A L+AQ +
Sbjct: 61 AQNAKITIHTARPGIVIGKKGEDVEKLRNTVSEMMGVPVHINIEEIRKPELDARLVAQGV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+K+ GRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKIQLGGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDY T A T YG G+KV++ + E+ + A ++ +K
Sbjct: 181 DIDYATYEAHTTYGVIGVKVWIF-KGEILGGIEQVRAEKNAPKKKG 225
>gi|238061115|ref|ZP_04605824.1| 30S ribosomal protein S3 [Micromonospora sp. ATCC 39149]
gi|237882926|gb|EEP71754.1| 30S ribosomal protein S3 [Micromonospora sp. ATCC 39149]
Length = 288
Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats.
Identities = 103/227 (45%), Positives = 151/227 (66%), Gaps = 2/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG++ W SRWFA Y + ED+KIR + L++AG++K+ IERT
Sbjct: 1 MGQKVHPTGFRLGISTDWKSRWFAD-KLYKDYIGEDVKIRRMMSKGLERAGISKVDIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG+KG + ++IR +L +T ++ L++ EV PE +A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRKGAEADRIRGELEKLTGKQVQLNIIEVKNPESDAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFG-ADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAM+ G++V SGRL GAE+SRTE Y EGRVPL TLR
Sbjct: 120 AEQLSSRVSFRRAMRKAMQSAMKNPVCKGIRVQVSGRLGGAEMSRTEFYREGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
A+I+YG A T +G G+KV++ D V ++ A E+
Sbjct: 180 ANIEYGFFEARTTFGRIGVKVWIYKGDAVPGRETPAEAPSRPRRERG 226
>gi|320529802|ref|ZP_08030879.1| ribosomal protein S3 [Selenomonas artemidis F0399]
gi|320137820|gb|EFW29725.1| ribosomal protein S3 [Selenomonas artemidis F0399]
Length = 223
Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats.
Identities = 102/222 (45%), Positives = 155/222 (69%), Gaps = 1/222 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP RLG+ W++RW+A ++ LHED+KIR+YL+ L+ AGV ++ ER+
Sbjct: 1 MGQKVNPHGIRLGIVKDWDARWYAD-KDFAQNLHEDIKIRDYLKKSLQTAGVPRVETERS 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ +++A+PG++IG+ G+ IE+I++ L +T+ + +++ E+ +P+++ATL+A++I
Sbjct: 60 KNRLKLTIHTAKPGMVIGRGGSGIEQIKEGLKGLTDKRVDINIAEIKQPDLDATLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR+ FRRAMK+AV MR GA G+K+ SGRL GAE++R E Y EG +PL TLRA
Sbjct: 120 AAQLERRIAFRRAMKQAVGRTMRLGAKGIKIAVSGRLGGAEIARRESYREGSIPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
IDYGTA A T YG GIKV++ + + D AA+ R
Sbjct: 180 DIDYGTAEAHTTYGRIGIKVWIFKGEVLPDKKQQPKAAKERS 221
>gi|289811445|ref|ZP_06542074.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 212
Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats.
Identities = 110/210 (52%), Positives = 150/210 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS WFA E+ L D K+R+YL L +A V++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210
IDY T+ A T YG G+KV++ + +
Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGG 210
>gi|119773360|ref|YP_926100.1| 30S ribosomal protein S3 [Shewanella amazonensis SB2B]
gi|152060903|sp|A1S224|RS3_SHEAM RecName: Full=30S ribosomal protein S3
gi|119765860|gb|ABL98430.1| SSU ribosomal protein S3P [Shewanella amazonensis SB2B]
Length = 230
Score = 268 bits (685), Expect = 4e-70, Method: Composition-based stats.
Identities = 109/226 (48%), Positives = 159/226 (70%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ W S W+A S+Y LH D ++R++L+ L+ A V+KI+IER
Sbjct: 1 MGQKVHPNGIRLGITKPWISTWYADKSDYANNLHSDWEVRKFLEKKLEAASVSKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+E +R +++ ++ + +++ E+ KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEVLRAEVAKISGTPAQINIAEIRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRIGAQGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDY T+ + T YG GIKV+V + + + + + ++
Sbjct: 181 DIDYATSESHTTYGVIGIKVWVFKGEVLDGMLPQVEEPKQQQPKRK 226
>gi|197287074|ref|YP_002152946.1| 30S ribosomal protein S3 [Proteus mirabilis HI4320]
gi|227354928|ref|ZP_03839342.1| 30S ribosomal protein S3 [Proteus mirabilis ATCC 29906]
gi|194684561|emb|CAR46389.1| 30S ribosomal protein S3 [Proteus mirabilis HI4320]
gi|227165010|gb|EEI49849.1| 30S ribosomal protein S3 [Proteus mirabilis ATCC 29906]
Length = 233
Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats.
Identities = 112/230 (48%), Positives = 159/230 (69%), Gaps = 4/230 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS W+A +E+ L D K+R+YL L +A V++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWYAGTNEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKNVADIAGVPAQINIAEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + + + PAA+ + ++
Sbjct: 181 DIDYNTSEAHTTYGVLGVKVWIFKGEILGGMAAVEQAEKPAAQPKKQQRK 230
>gi|113460214|ref|YP_718271.1| 30S ribosomal protein S3 [Haemophilus somnus 129PT]
gi|170718252|ref|YP_001785272.1| 30S ribosomal protein S3 [Haemophilus somnus 2336]
gi|123131900|sp|Q0I157|RS3_HAES1 RecName: Full=30S ribosomal protein S3
gi|112822257|gb|ABI24346.1| SSU ribosomal protein S3P [Haemophilus somnus 129PT]
gi|168826381|gb|ACA31752.1| ribosomal protein S3 [Haemophilus somnus 2336]
Length = 235
Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats.
Identities = 107/223 (47%), Positives = 150/223 (67%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS WFA ++ L D K+R++L L A V++I IER
Sbjct: 1 MGQKVHPHGIRLGIVKPWNSTWFANTQDFADNLDGDFKVRQFLNKELANASVSRITIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRNAVAAIAGVPAQINIAEVKKPELDAKLVAGSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMK+AVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKKAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223
IDY T+ A T YG G+KV++ + + + E +
Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAIAQQPEQQPA 223
>gi|108809248|ref|YP_653164.1| 30S ribosomal protein S3 [Yersinia pestis Antiqua]
gi|167398347|ref|ZP_02303871.1| ribosomal protein S3 [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|123372094|sp|Q1C2V3|RS3_YERPA RecName: Full=30S ribosomal protein S3
gi|108781161|gb|ABG15219.1| SSU ribosomal protein S3P [Yersinia pestis Antiqua]
gi|167050851|gb|EDR62259.1| ribosomal protein S3 [Yersinia pestis biovar Antiqua str.
UG05-0454]
Length = 232
Score = 268 bits (685), Expect = 5e-70, Method: Composition-based stats.
Identities = 111/229 (48%), Positives = 158/229 (68%), Gaps = 3/229 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS W+A E+ L D K+R++L L +A V++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKAWNSTWYANTKEFADNLDSDFKVRQFLTKELAKASVSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 ISQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS---DSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + + + PAA+ + ++
Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEPAAQPKKQQRK 229
>gi|237806881|ref|YP_002891321.1| 30S ribosomal protein S3 [Tolumonas auensis DSM 9187]
gi|237499142|gb|ACQ91735.1| ribosomal protein S3 [Tolumonas auensis DSM 9187]
Length = 238
Score = 268 bits (684), Expect = 5e-70, Method: Composition-based stats.
Identities = 107/210 (50%), Positives = 153/210 (72%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ +NS W+A E+ LH D ++R+YL LK A +++I+IER
Sbjct: 1 MGQKVHPNGIRLGITKPFNSTWYANTKEFADNLHGDFQVRQYLTKELKAASLSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK+++++ +++ EV KPE+++ L+A SI
Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRKQIASIAGVPAQINIAEVRKPELDSQLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
+ QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 SSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210
IDY T+ A T YG G+KV++ + +
Sbjct: 181 DIDYATSEAHTTYGVIGVKVWIFKGEVLGG 210
>gi|84515640|ref|ZP_01003001.1| 30S ribosomal protein S3 [Loktanella vestfoldensis SKA53]
gi|84510082|gb|EAQ06538.1| 30S ribosomal protein S3 [Loktanella vestfoldensis SKA53]
Length = 238
Score = 268 bits (684), Expect = 5e-70, Method: Composition-based stats.
Identities = 127/227 (55%), Positives = 170/227 (74%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+NPI RL VN TW+SRWFA EYG LL EDLKI+ +++ Q+GV++++IER
Sbjct: 1 MGNKVNPIGMRLQVNRTWDSRWFANTREYGDLLLEDLKIKAFIRKECAQSGVSRVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ +++ARPG+IIGKKG DIE +R+KL+N+T SE+HL++ EV KPE++A L+A+SI
Sbjct: 61 HKKCRVTIHAARPGVIIGKKGADIEGLRQKLANLTKSELHLNIVEVRKPELDAALVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLERRV FRRAMKRAVQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 GQQLERRVSFRRAMKRAVQNAMRMGALGIRVNLAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDY A T YG GIKV++ + E+ + D +H +++ +
Sbjct: 181 DIDYALFEAMTPYGIIGIKVFIY-KGEIMEHDPQGHDRKHAELQEGA 226
>gi|124514437|gb|EAY55950.1| ribosomal protein S3 [Leptospirillum rubarum]
Length = 226
Score = 268 bits (684), Expect = 5e-70, Method: Composition-based stats.
Identities = 115/227 (50%), Positives = 162/227 (71%), Gaps = 3/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI FRLG TW+SRW+A+ + LLHEDLKIR+ ++ L AG+AKI IERT
Sbjct: 1 MGQKVHPIGFRLGYIKTWSSRWYAQ-KGFADLLHEDLKIRKMVKKKLFHAGIAKIEIERT 59
Query: 61 HKNC--RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118
K+ RI +++ARPGLIIGKKG +IEK++ +L T S + +++ E+ KPE+ A LIA+
Sbjct: 60 GKDALARISIHTARPGLIIGKKGLEIEKLKSELEETTKSHVSINIKEIKKPELEAQLIAE 119
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
S+A QLE+R+ +RRAMK++V SA+RFGA GVK+ +GRL G+E++RTE Y EGRVPL TL
Sbjct: 120 SVASQLEKRISYRRAMKKSVSSALRFGALGVKICCAGRLGGSEIARTEWYREGRVPLHTL 179
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
RA ID+G A A T +G G+KV+V + + + + + R +
Sbjct: 180 RADIDFGFAEASTTFGKIGVKVWVYRGEILPGQEEVLSKPKERRGRQ 226
>gi|222056699|ref|YP_002539061.1| ribosomal protein S3 [Geobacter sp. FRC-32]
gi|254764532|sp|B9M6H2|RS3_GEOSF RecName: Full=30S ribosomal protein S3
gi|221565988|gb|ACM21960.1| ribosomal protein S3 [Geobacter sp. FRC-32]
Length = 210
Score = 268 bits (684), Expect = 6e-70, Method: Composition-based stats.
Identities = 114/211 (54%), Positives = 162/211 (76%), Gaps = 1/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI FRLGV TW+S+W+A ++ LLHEDLK++ +L+ L +GV+KI IER
Sbjct: 1 MGQKVNPIGFRLGVIKTWDSKWYAE-KDFAKLLHEDLKLKSFLKKRLYHSGVSKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I +Y+ARPGLIIGKKG+++E ++K+L+ +T+ E++L++ EV KPE++A L++++I
Sbjct: 60 AGKAKINIYTARPGLIIGKKGSEVETLKKELAKLTDKEVYLNIQEVRKPELDAQLVSENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV FRRAMK++V S+++FGA G+++ SGRL GAE+SRTE Y EGRVPL TLRA
Sbjct: 120 ALQLERRVAFRRAMKKSVTSSLKFGAKGIRITCSGRLGGAEMSRTEWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYG A A+T YG G+KV + + +S
Sbjct: 180 DIDYGFAEAKTTYGIIGVKVLIFKGEVLSGK 210
>gi|222109499|ref|YP_002551763.1| 30S ribosomal protein s3 [Acidovorax ebreus TPSY]
gi|221728943|gb|ACM31763.1| ribosomal protein S3 [Acidovorax ebreus TPSY]
Length = 288
Score = 268 bits (684), Expect = 6e-70, Method: Composition-based stats.
Identities = 124/219 (56%), Positives = 166/219 (75%), Gaps = 2/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V+ W SRW+A ++ +L ED+K+REYL+ LK A V++ILIER
Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYASNRDFAGMLAEDIKVREYLKAKLKNAAVSRILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI ++SARPG++IGKKG DIE ++K+L+ + +++ EV KPEI+A LIA SI
Sbjct: 61 AKNARITIFSARPGVVIGKKGEDIENLKKELATRLGVPVAVNIEEVRKPEIDAKLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDYGT+ A+T YG G+KV+V D + +D +PAAE
Sbjct: 181 DIDYGTSEAKTTYGVIGVKVWVYKGDTLGRND--LPAAE 217
>gi|241765223|ref|ZP_04763206.1| ribosomal protein S3 [Acidovorax delafieldii 2AN]
gi|241365103|gb|EER59982.1| ribosomal protein S3 [Acidovorax delafieldii 2AN]
Length = 293
Score = 268 bits (684), Expect = 6e-70, Method: Composition-based stats.
Identities = 124/219 (56%), Positives = 166/219 (75%), Gaps = 2/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V+ W SRW+A ++ +L ED+K+REYL+ LK A V++ILIER
Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYASNRDFAGMLAEDIKVREYLKAKLKNAAVSRILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI +YSARPG++IGKKG DIE ++K+L++ + +++ EV KPEI+A LIA SI
Sbjct: 61 AKNARITIYSARPGVVIGKKGEDIENLKKELASRLGVPVAVNIEEVRKPEIDAKLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDYGT+ A+T YG G+KV+V D + +D +PA E
Sbjct: 181 DIDYGTSEAKTTYGVIGVKVWVYKGDTLGRND--LPAVE 217
>gi|332041529|gb|EGI77889.1| 30S ribosomal protein S3 [Hylemonella gracilis ATCC 19624]
Length = 296
Score = 267 bits (683), Expect = 7e-70, Method: Composition-based stats.
Identities = 118/220 (53%), Positives = 159/220 (72%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRL V+ W SRW+A ++ +L ED+K+REYL+ LK A V+++LIER
Sbjct: 1 MGQKINPTGFRLAVSRNWASRWYASNRDFAGMLAEDIKVREYLKTKLKNASVSRVLIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI ++SARPG++IGKKG DIE +++ L + +++ EV KPEI+A LIA SI
Sbjct: 61 AKNARITIFSARPGVVIGKKGEDIENLKRDLGKQLGVPVAVNIEEVRKPEIDAKLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
IDYGT+ A+T YG G+KV+V D + ++
Sbjct: 181 DIDYGTSEAKTTYGVIGVKVWVYKGDNLGRNEQPATTEPR 220
>gi|114778818|ref|ZP_01453625.1| 30S ribosomal protein S3 [Mariprofundus ferrooxydans PV-1]
gi|114550949|gb|EAU53513.1| 30S ribosomal protein S3 [Mariprofundus ferrooxydans PV-1]
Length = 216
Score = 267 bits (683), Expect = 7e-70, Method: Composition-based stats.
Identities = 108/210 (51%), Positives = 151/210 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI FR+GV W S W+A +GA L ED+K+R +++ LK AGV++I+IER
Sbjct: 1 MGQKVNPIGFRVGVIRNWESVWYASDKNFGAQLREDIKLRRHVKERLKHAGVSRIIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ V+++RPG++IGKKG++I+ +R +L E+ + + EV +PE A L+A+++
Sbjct: 61 ADKIKVTVHTSRPGVVIGKKGSEIDAVRNELVREFGQEVQVFIVEVRRPEAEAQLVAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A Q+ERRV FRRAMKRAVQSAMR GA GV++ +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AFQMERRVAFRRAMKRAVQSAMRMGAKGVRINCAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210
+DYG A A T YG G+KV+V ++ D
Sbjct: 181 DVDYGFAEAHTTYGVIGVKVWVFNGIKLGD 210
>gi|121592718|ref|YP_984614.1| 30S ribosomal protein S3 [Acidovorax sp. JS42]
gi|152060839|sp|A1W2R3|RS3_ACISJ RecName: Full=30S ribosomal protein S3
gi|120604798|gb|ABM40538.1| SSU ribosomal protein S3P [Acidovorax sp. JS42]
Length = 288
Score = 267 bits (683), Expect = 7e-70, Method: Composition-based stats.
Identities = 124/219 (56%), Positives = 166/219 (75%), Gaps = 2/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V+ W SRW+A ++ +L ED+K+REYL+ LK A V++ILIER
Sbjct: 1 MGQKIHPTGFRLSVSRNWASRWYASNRDFAGMLAEDIKVREYLKAKLKNAAVSRILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI ++SARPG++IGKKG DIE ++K+L+ + +++ EV KPEI+A LIA SI
Sbjct: 61 AKNARITIFSARPGVVIGKKGEDIENLKKELATRLGVPVAVNIEEVRKPEIDAKLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDYGT+ A+T YG G+KV+V D + +D +PAAE
Sbjct: 181 DIDYGTSEAKTTYGVIGVKVWVYKGDTLGRND--LPAAE 217
>gi|206602681|gb|EDZ39162.1| Ribosomal protein S3 [Leptospirillum sp. Group II '5-way CG']
Length = 226
Score = 267 bits (683), Expect = 7e-70, Method: Composition-based stats.
Identities = 115/227 (50%), Positives = 161/227 (70%), Gaps = 3/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI FRLG TW+SRW+A+ + LLHEDLKIR+ ++ L AG+AKI IERT
Sbjct: 1 MGQKVHPIGFRLGYIKTWSSRWYAQ-KGFADLLHEDLKIRKMVKKKLFHAGIAKIEIERT 59
Query: 61 HKNC--RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118
K+ RI +++ARPGLIIGKKG +IEK++ +L T S + +++ E+ KPE+ A LIA+
Sbjct: 60 GKDALARISIHTARPGLIIGKKGLEIEKLKSELEETTKSHVSINIKEIKKPELEAQLIAE 119
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
S+A QLE+R+ +RRAMK++V SA+RFGA GVK+ +GRL G+E++RTE Y EGRVPL TL
Sbjct: 120 SVASQLEKRISYRRAMKKSVSSALRFGALGVKICCAGRLGGSEIARTEWYREGRVPLHTL 179
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
RA ID+G A A T +G G+KV+V + + + + R +
Sbjct: 180 RADIDFGFAEASTTFGKIGVKVWVYRGEILPGQEEVASKPKERRGRQ 226
>gi|134096315|ref|YP_001101390.1| 30S ribosomal protein S3 [Herminiimonas arsenicoxydans]
gi|189045012|sp|A4G9T2|RS3_HERAR RecName: Full=30S ribosomal protein S3
gi|133740218|emb|CAL63269.1| 30S ribosomal protein S3 [Herminiimonas arsenicoxydans]
Length = 283
Score = 267 bits (683), Expect = 7e-70, Method: Composition-based stats.
Identities = 118/225 (52%), Positives = 159/225 (70%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V W SRW+A S + +L+EDLK+R YL+ LK A V +++IER
Sbjct: 1 MGQKIHPTGFRLSVTRNWASRWYAGNSNFATMLNEDLKVRAYLKTKLKNASVGRVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI +YS+RPG++IGKKG DIE ++ L+ M +H+++ E+ KPE +A LIA SI
Sbjct: 61 AKNARITIYSSRPGVVIGKKGEDIEVLKSALTKMMGVPVHVNIEEIRKPETDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++R E Y EGRVPL TLRA
Sbjct: 121 AQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARKEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDYG AET YG GIKV+V D + + + + ++
Sbjct: 181 EIDYGFGEAETTYGIIGIKVWVYKGDRLPSGEPPVDLTKEDDTKR 225
>gi|209521379|ref|ZP_03270092.1| ribosomal protein S3 [Burkholderia sp. H160]
gi|209498199|gb|EDZ98341.1| ribosomal protein S3 [Burkholderia sp. H160]
Length = 268
Score = 267 bits (683), Expect = 7e-70, Method: Composition-based stats.
Identities = 116/229 (50%), Positives = 165/229 (72%), Gaps = 2/229 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V+ W SRW+A + + A+L ED+ +REYL+ LK A V +++IER
Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNNNFAAMLQEDIGVREYLKKKLKNASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI ++S+RPG++IGKKG DIE ++ +L +H+++ E+ KPE +A LIA SI
Sbjct: 61 AKNARITIFSSRPGVVIGKKGEDIELLKSELQKRMGVPVHVNIEEIRKPETDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLERR++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI--PAAEHRVVEKDS 227
IDY T+ A+T YG G+KV+V D + +D+ + AE + +++
Sbjct: 181 DIDYATSEAKTTYGIIGVKVWVYKGDTLGRNDAPVVEEVAEEKRPRRNA 229
>gi|167587766|ref|ZP_02380154.1| 30S ribosomal protein S3 [Burkholderia ubonensis Bu]
Length = 266
Score = 267 bits (683), Expect = 7e-70, Method: Composition-based stats.
Identities = 116/229 (50%), Positives = 165/229 (72%), Gaps = 2/229 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V+ W SRW+A + + A+L ED+ +REYL+ LK A V +++IER
Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNNNFAAMLKEDIGVREYLKKKLKNASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI ++S+RPG++IGKKG DIE ++ +L +H+++ E+ KPE +A LIA SI
Sbjct: 61 AKNARITIFSSRPGVVIGKKGEDIELLKTELQRRMGVPVHVNIEEIRKPETDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLERR++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI--PAAEHRVVEKDS 227
IDY T+ A+T YG G+KV+V D + +D+ + AE + +++
Sbjct: 181 DIDYATSEAKTTYGIIGVKVWVYKGDTLGRNDAPVVEEVAEDKRPRRNA 229
>gi|317050534|ref|YP_004111650.1| 30S ribosomal protein S3 [Desulfurispirillum indicum S5]
gi|316945618|gb|ADU65094.1| ribosomal protein S3 [Desulfurispirillum indicum S5]
Length = 230
Score = 267 bits (683), Expect = 7e-70, Method: Composition-based stats.
Identities = 109/227 (48%), Positives = 157/227 (69%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ TWNS+W+A +Y LHEDL+I ++L+ L AG++++ IER
Sbjct: 1 MGQKVHPTGLRLGIIKTWNSKWYAN-KDYADFLHEDLRIEKHLRKELYHAGISRVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++ARPG++IGKKG +IEK+RK LS+MT I ++V EV KPE++A L+A+++
Sbjct: 60 PGKVNITLHTARPGIVIGKKGAEIEKVRKSLSDMTKKNIFVNVKEVKKPELDAQLVAENV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV FRRAMK+AV M+ G +G+++ +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 120 AMQLERRVAFRRAMKKAVGMTMKMGGEGIRIACAGRLGGAEIARTEWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYG A A+T YG G+KV++S + + S +++
Sbjct: 180 DIDYGFAEAKTTYGIIGVKVWMSHGEILDTSKKAQKVEAAAGATREA 226
>gi|145300929|ref|YP_001143770.1| ribosomal protein S3 [Aeromonas salmonicida subsp. salmonicida
A449]
gi|152060842|sp|A4ST00|RS3_AERS4 RecName: Full=30S ribosomal protein S3
gi|142853701|gb|ABO92022.1| ribosomal protein S3 [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 236
Score = 267 bits (683), Expect = 7e-70, Method: Composition-based stats.
Identities = 108/210 (51%), Positives = 150/210 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS WFA ++ L+ D ++R++L LK A ++KI IER
Sbjct: 1 MGQKVHPNGIRLGITKPWNSTWFANTKDFADNLYSDFQVRQFLTKELKNASLSKITIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK ++ +T ++++EV KPE++ L+A SI
Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRKAVAVITGVPAQINISEVRKPELDGKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210
IDY T+ A T YG G+KV++ + +
Sbjct: 181 DIDYATSEAHTTYGVIGVKVWIFKGEVLGG 210
>gi|300721371|ref|YP_003710642.1| 30S ribosomal subunit protein S3 [Xenorhabdus nematophila ATCC
19061]
gi|297627859|emb|CBJ88405.1| 30S ribosomal subunit protein S3 [Xenorhabdus nematophila ATCC
19061]
Length = 224
Score = 267 bits (683), Expect = 7e-70, Method: Composition-based stats.
Identities = 109/220 (49%), Positives = 154/220 (70%), Gaps = 1/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS W+A E+ L D K+R+YL L +A +++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWYANTKEFADNLDSDFKVRQYLNKELVKASISRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKAVADIAGVPAQINIAEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
+ QLERRV+FRRAMKRAV +AMR GA G+K SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 SSQLERRVMFRRAMKRAVHNAMRLGAKGIKEEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
IDY T+ A T YG G+KV++ + E+ + + AE
Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIF-KGEILGGMAAVEQAEK 219
>gi|296163315|ref|ZP_06846076.1| ribosomal protein S3 [Burkholderia sp. Ch1-1]
gi|295886454|gb|EFG66311.1| ribosomal protein S3 [Burkholderia sp. Ch1-1]
Length = 268
Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats.
Identities = 116/229 (50%), Positives = 165/229 (72%), Gaps = 2/229 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V+ W SRW+A + + A+L ED+ +REYL+ LK A V +++IER
Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNNNFAAMLQEDIGVREYLKKKLKNASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI ++S+RPG++IGKKG DIE ++ +L +H+++ E+ KPE +A LIA SI
Sbjct: 61 AKNARITIFSSRPGVVIGKKGEDIELLKSELQKRMGVPVHVNIEEIRKPETDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLERR++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI--PAAEHRVVEKDS 227
IDY T+ A+T YG G+KV+V D + +D+ + AE + +++
Sbjct: 181 DIDYATSEAKTTYGIIGVKVWVYKGDTLGRNDAPVVEEVAEEKRPRRNA 229
>gi|187925610|ref|YP_001897252.1| 30S ribosomal protein S3 [Burkholderia phytofirmans PsJN]
gi|295677926|ref|YP_003606450.1| ribosomal protein S3 [Burkholderia sp. CCGE1002]
gi|307731249|ref|YP_003908473.1| 30S ribosomal protein S3 [Burkholderia sp. CCGE1003]
gi|323527596|ref|YP_004229749.1| 30S ribosomal protein S3 [Burkholderia sp. CCGE1001]
gi|226697677|sp|B2T745|RS3_BURPP RecName: Full=30S ribosomal protein S3
gi|187716804|gb|ACD18028.1| ribosomal protein S3 [Burkholderia phytofirmans PsJN]
gi|295437769|gb|ADG16939.1| ribosomal protein S3 [Burkholderia sp. CCGE1002]
gi|307585784|gb|ADN59182.1| ribosomal protein S3 [Burkholderia sp. CCGE1003]
gi|323384598|gb|ADX56689.1| ribosomal protein S3 [Burkholderia sp. CCGE1001]
Length = 268
Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats.
Identities = 116/229 (50%), Positives = 165/229 (72%), Gaps = 2/229 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V+ W SRW+A + + A+L ED+ +REYL+ LK A V +++IER
Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNNNFAAMLQEDIGVREYLKKKLKNASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI ++S+RPG++IGKKG DIE ++ +L +H+++ E+ KPE +A LIA SI
Sbjct: 61 AKNARITIFSSRPGVVIGKKGEDIELLKSELQKRMGVPVHVNIEEIRKPETDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLERR++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI--PAAEHRVVEKDS 227
IDY T+ A+T YG G+KV+V D + +D+ + AE + +++
Sbjct: 181 DIDYATSEAKTTYGIIGVKVWVYKGDTLGRNDAPVVEEVAEEKRPRRNA 229
>gi|153004779|ref|YP_001379104.1| ribosomal protein S3 [Anaeromyxobacter sp. Fw109-5]
gi|189044983|sp|A7HBM4|RS3_ANADF RecName: Full=30S ribosomal protein S3
gi|152028352|gb|ABS26120.1| ribosomal protein S3 [Anaeromyxobacter sp. Fw109-5]
Length = 224
Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats.
Identities = 111/218 (50%), Positives = 157/218 (72%), Gaps = 1/218 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI FRLGV +W+S+W+ Y LHED+ +REY++ L QAG+++I IER
Sbjct: 1 MGQKVHPIGFRLGVIRSWDSKWY-EEKNYAKWLHEDIHLREYVKEKLGQAGISRIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I V++ARPG++IGK+G IE I+K+L T++E++L+V EV K E +A L+A++I
Sbjct: 60 ANKVKINVHTARPGIVIGKRGAGIETIKKELQGKTDNEVYLNVVEVRKAETDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR+ FRRAMK++VQ+A++FGA G++V SGRL G+E++R E Y EGRVPL TLRA
Sbjct: 120 ATQLERRIAFRRAMKKSVQTALKFGAKGIRVACSGRLGGSEMARYEWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
IDYG A A+T YG G KV++ + + S S P
Sbjct: 180 DIDYGFAEAKTTYGKIGCKVWIMRGEVLPQSASARPPR 217
>gi|21241743|ref|NP_641325.1| 30S ribosomal protein S3 [Xanthomonas axonopodis pv. citri str.
306]
gi|294627847|ref|ZP_06706426.1| 30S ribosomal protein S3 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|294664000|ref|ZP_06729414.1| 30S ribosomal protein S3 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|27734501|sp|Q8PNR9|RS3_XANAC RecName: Full=30S ribosomal protein S3
gi|21107114|gb|AAM35861.1| 30S ribosomal protein S3 [Xanthomonas axonopodis pv. citri str.
306]
gi|292597761|gb|EFF41919.1| 30S ribosomal protein S3 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292606229|gb|EFF49466.1| 30S ribosomal protein S3 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
Length = 244
Score = 267 bits (683), Expect = 8e-70, Method: Composition-based stats.
Identities = 116/208 (55%), Positives = 156/208 (75%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K++P RLG+ WNS+W+A +E+ + L DLK+RE L+ L QAGV+KILIER
Sbjct: 1 MGHKVHPTGIRLGIAKDWNSKWYANKAEFASYLAADLKVREMLRKKLAQAGVSKILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ +++ARPG++IGK+G DIEK+RK++S + H++V EV KPE++A L+A+SI
Sbjct: 61 AKTARVTIHTARPGVVIGKRGEDIEKLRKEVSELMGVPAHINVTEVRKPELDAQLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERR++FRRAMKR+V +AMR GA G+KV +GRLNGAE++R+E Y EGRVPL TLRA
Sbjct: 121 AQQLERRIMFRRAMKRSVGNAMRLGALGIKVNVAGRLNGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
IDYG A A T YG GIKV++ +
Sbjct: 181 DIDYGFAEASTTYGIIGIKVWIYKGEVF 208
>gi|78046561|ref|YP_362736.1| 30S ribosomal protein S3 [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|325925381|ref|ZP_08186783.1| SSU ribosomal protein S3P [Xanthomonas perforans 91-118]
gi|91207850|sp|Q3BWX7|RS3_XANC5 RecName: Full=30S ribosomal protein S3
gi|78034991|emb|CAJ22636.1| 30S ribosomal protein S3 [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|325544259|gb|EGD15640.1| SSU ribosomal protein S3P [Xanthomonas perforans 91-118]
Length = 244
Score = 267 bits (682), Expect = 9e-70, Method: Composition-based stats.
Identities = 116/208 (55%), Positives = 156/208 (75%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K++P RLG+ WNS+W+A +E+ + L DLK+RE L+ L QAGV+KILIER
Sbjct: 1 MGHKVHPTGIRLGIAKDWNSKWYANKAEFASYLAADLKVREMLRKKLAQAGVSKILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ +++ARPG++IGK+G DIEK+RK++S + H++V EV KPE++A L+A+SI
Sbjct: 61 AKTARVTIHTARPGVVIGKRGEDIEKLRKEVSQLMGVPAHINVTEVRKPELDAQLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERR++FRRAMKR+V +AMR GA G+KV +GRLNGAE++R+E Y EGRVPL TLRA
Sbjct: 121 AQQLERRIMFRRAMKRSVGNAMRLGALGIKVNVAGRLNGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
IDYG A A T YG GIKV++ +
Sbjct: 181 DIDYGFAEASTTYGIIGIKVWIYKGEVF 208
>gi|297618378|ref|YP_003703537.1| ribosomal protein S3 [Syntrophothermus lipocalidus DSM 12680]
gi|297146215|gb|ADI02972.1| ribosomal protein S3 [Syntrophothermus lipocalidus DSM 12680]
Length = 222
Score = 267 bits (682), Expect = 9e-70, Method: Composition-based stats.
Identities = 99/221 (44%), Positives = 155/221 (70%), Gaps = 1/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+G+ W+S+W+A +Y LLHED IR+Y++ + AG++K+ IERT
Sbjct: 1 MGQKVHPKGLRIGIIRDWDSKWYAD-RDYTDLLHEDYHIRKYIKENFFAAGISKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++A+PG+IIG+ GT++E++R+ L +T +++++ E+ KPE++A ++A+++
Sbjct: 60 GNRVRVSIHTAKPGIIIGRGGTEVERLRQDLGKLTGKTVNINIVEIKKPELDAQIVAENV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A Q+ERRV +RRAMK+AVQ MR GA+G+K+ SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 120 AAQIERRVAYRRAMKQAVQRTMRAGAEGIKIAVSGRLAGAEIARTEWYAEGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
IDYG A A T YG GIK++++ + + +
Sbjct: 180 DIDYGFAEAMTTYGKIGIKIWINRGEVLPAAKQPAKKTGEE 220
>gi|118496858|ref|YP_897908.1| 30S ribosomal protein S3 [Francisella tularensis subsp. novicida
U112]
gi|152060861|sp|A0Q4I9|RS3_FRATN RecName: Full=30S ribosomal protein S3
gi|118422764|gb|ABK89154.1| 30S ribosomal protein S3 [Francisella novicida U112]
gi|328675413|gb|AEB28088.1| SSU ribosomal protein S3p (S3e) [Francisella cf. novicida 3523]
gi|328676327|gb|AEB27197.1| SSU ribosomal protein S3p (S3e) [Francisella cf. novicida Fx1]
Length = 223
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 108/227 (47%), Positives = 157/227 (69%), Gaps = 5/227 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP RLG W S W+A S Y L+ED+K+RE+L L A V+KI IER
Sbjct: 1 MGQKVNPNGIRLGYIRDWRSTWYADSSSYATKLNEDIKVREFLHKKLAAAAVSKIQIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+N +I +++ARPG++IGKKG D+EK+R ++ + + +++ EV KPEI+A L+A+S+
Sbjct: 61 AQNAKITIHTARPGIVIGKKGEDVEKLRAEVHKLMGIPVQINIEEVRKPEIDAKLVAESV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+RV+FRRAMK+A+Q+AM+ GA G+K++ SGRL GAE++R+E +GRVPLQT RA
Sbjct: 121 AQQLEKRVMFRRAMKKAMQAAMKSGAKGIKIMVSGRLGGAEIARSEWARDGRVPLQTFRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
+DY TA A T YG G+KV++ + + AE + +K +
Sbjct: 181 DVDYATAEALTTYGVIGVKVWIYKGEILPGQ-----IAEKKNNKKGA 222
>gi|300022547|ref|YP_003755158.1| ribosomal protein S3 [Hyphomicrobium denitrificans ATCC 51888]
gi|299524368|gb|ADJ22837.1| ribosomal protein S3 [Hyphomicrobium denitrificans ATCC 51888]
Length = 275
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 126/226 (55%), Positives = 170/226 (75%), Gaps = 1/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ R+G+N TW+SRWFA EYG LLHED IR ++ ++AG++K++IER
Sbjct: 1 MGQKVNPVGLRVGINRTWDSRWFAARGEYGKLLHEDRAIRNHIMKEQREAGISKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK CR+ V +ARPG++IGKKG IE++R L+ +T+SE+HL++ E+ KPEI+ATLIA+ I
Sbjct: 61 HKKCRVTVQTARPGILIGKKGEKIERLRADLAKLTSSEVHLNILEIRKPEIDATLIAEGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKRAVQSA+R GA G+++ +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRAVQSALRLGAIGIRINVAGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
ID+G VA TAYG GIKV+V + E+ + D + +++
Sbjct: 181 DIDFGYGVARTAYGIIGIKVWVF-KGEIIEHDPMAADKKLAEMQES 225
>gi|212637960|ref|YP_002314480.1| 30S ribosomal protein S3 [Anoxybacillus flavithermus WK1]
gi|226697662|sp|B7GJ73|RS3_ANOFW RecName: Full=30S ribosomal protein S3
gi|212559440|gb|ACJ32495.1| Ribosomal protein S3 [Anoxybacillus flavithermus WK1]
Length = 218
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 104/216 (48%), Positives = 149/216 (68%), Gaps = 1/216 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI R+G+ W SRW+A +Y LLHEDLKIREYL L A V++I IER
Sbjct: 1 MGQKVNPIGLRIGIIRDWESRWYAE-KDYADLLHEDLKIREYLTKRLSDAAVSRIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK G+++E +RK L+ +T +H+++ E+ KP++ A L+A++I
Sbjct: 60 ANRVNITIHTAKPGMVIGKGGSEVEALRKALNELTGKRVHINIVEIKKPDLEAKLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E RV FRRA K+A+Q MR GA G+K + SGRL GA+++R+E Y EG VPL TLRA
Sbjct: 120 ARQIENRVSFRRAQKQAIQRTMRAGAKGIKTMVSGRLGGADIARSEHYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
IDY TA A+T YG G+KV++ + + T
Sbjct: 180 DIDYATAEADTTYGKIGVKVWIYRGEVLPTKKKTEE 215
>gi|91785459|ref|YP_560665.1| 30S ribosomal protein S3 [Burkholderia xenovorans LB400]
gi|122970104|sp|Q13TH6|RS3_BURXL RecName: Full=30S ribosomal protein S3
gi|91689413|gb|ABE32613.1| SSU ribosomal protein S3P [Burkholderia xenovorans LB400]
Length = 268
Score = 267 bits (682), Expect = 1e-69, Method: Composition-based stats.
Identities = 117/229 (51%), Positives = 165/229 (72%), Gaps = 2/229 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V+ W SRW+A + + A+L ED+ +REYL+ LK A V +++IER
Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNNNFAAMLQEDIGVREYLKKKLKNASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI +YS+RPG++IGKKG DIE ++ +L +H+++ E+ KPE +A LIA SI
Sbjct: 61 AKNARITIYSSRPGVVIGKKGEDIELLKSELQRRMGVPVHVNIEEIRKPETDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLERR++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI--PAAEHRVVEKDS 227
IDY T+ A+T YG G+KV+V D + +D+ + AE + +++
Sbjct: 181 DIDYATSEAKTTYGIIGVKVWVYKGDTLGRNDAPVVEEVAEEKRPRRNA 229
>gi|325921487|ref|ZP_08183342.1| SSU ribosomal protein S3P [Xanthomonas gardneri ATCC 19865]
gi|325548034|gb|EGD19033.1| SSU ribosomal protein S3P [Xanthomonas gardneri ATCC 19865]
Length = 244
Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats.
Identities = 115/208 (55%), Positives = 155/208 (74%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K++P RLG+ WNS+W+A +++ L DLK+RE L+ L QAG++KILIER
Sbjct: 1 MGHKVHPTGIRLGIAKDWNSKWYANKADFAGYLAADLKVREMLRKKLAQAGISKILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ +++ARPG++IGK+G DIEK+RK++S M H++V EV KPE++A L+A+SI
Sbjct: 61 AKTARVTIHTARPGVVIGKRGEDIEKLRKEVSAMMGVPAHINVTEVRKPELDAQLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERR++FRRAMKR+V +AMR GA G+KV +GRLNGAE++R+E Y EGRVPL TLRA
Sbjct: 121 AQQLERRIMFRRAMKRSVGNAMRLGALGIKVNVAGRLNGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
IDYG A A T YG GIKV++ +
Sbjct: 181 DIDYGFAEASTTYGIIGIKVWIYKGEVF 208
>gi|313888812|ref|ZP_07822473.1| ribosomal protein S3 [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845181|gb|EFR32581.1| ribosomal protein S3 [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 251
Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats.
Identities = 94/214 (43%), Positives = 147/214 (68%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+S+W+A + LL ED IR+Y++ L AG+AKI IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYADKKNFADLLVEDNNIRKYVKKKLYAAGIAKIEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I +++A+PG++IG+ G +E++R ++ +T+ + ++V E+ P+++A ++A+ I
Sbjct: 61 ANRVKISIHTAKPGMVIGRGGAGVEELRTEIEKLTDKSVVINVEEIKNPDLDAQIVAEGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+ LERRV FRRAMK+A+Q MR GA G+K +GR+ GA+++RTE Y EG +PLQTLRA
Sbjct: 121 AEALERRVAFRRAMKQAIQRTMRQGALGIKTSVAGRVGGADMARTEGYSEGTIPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
IDYG A A+T YG G+KV++ + + + +
Sbjct: 181 DIDYGFAEADTTYGKLGVKVWLYKGEVLPEIEDE 214
>gi|77918321|ref|YP_356136.1| 30S ribosomal protein S3 [Pelobacter carbinolicus DSM 2380]
gi|91207825|sp|Q3A6P1|RS3_PELCD RecName: Full=30S ribosomal protein S3
gi|77544404|gb|ABA87966.1| SSU ribosomal protein S3P [Pelobacter carbinolicus DSM 2380]
Length = 210
Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats.
Identities = 120/211 (56%), Positives = 159/211 (75%), Gaps = 1/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI FRLGV TW+SRW+A G EY LLHED+K+R YL+ L AGVAKI +ER
Sbjct: 1 MGQKVHPIGFRLGVVKTWSSRWYAEG-EYSQLLHEDIKLRNYLKKRLYHAGVAKIELERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I VY+ARPG+IIGKKG ++E ++K L+ +T+ E+ +++ EV KPEI+A L+A+++
Sbjct: 60 ASKAKINVYAARPGIIIGKKGAEVEALKKDLARLTDKEVFINIQEVRKPEIDAQLVAENV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV FRRAMK++V A++FGA G+K+ SGRL GAE+SRTE Y EGRVPL TLRA
Sbjct: 120 ATQLERRVAFRRAMKKSVSMALKFGAQGIKITCSGRLGGAEMSRTEWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYG A A+T YG G+KV + + +S
Sbjct: 180 DIDYGFAEAKTTYGIIGVKVLIFKGEVLSQD 210
>gi|310659496|ref|YP_003937217.1| 30S ribosomal protein S3 [Clostridium sticklandii DSM 519]
gi|308826274|emb|CBH22312.1| 30S ribosomal subunit protein S3 [Clostridium sticklandii]
Length = 263
Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats.
Identities = 106/232 (45%), Positives = 156/232 (67%), Gaps = 7/232 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+G+N W+S+WFA ++ A L ED KIR+ L+ L +G+ KI IER+
Sbjct: 1 MGQKVNPHGLRVGINKDWDSKWFANKGDFAAFLQEDFKIRKVLKKKLYLSGIPKIEIERS 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ +++A+PG++IGK G IE+I+ ++ MT ++ +++ EV +PE+++ L+A++I
Sbjct: 61 GNKVKLNIFTAKPGMVIGKGGQGIEEIKSEVEKMTGKQVFVNILEVKRPEMDSQLVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A LERRV FRRAMK+A+Q AMR GA G+KV SGRL GAE++RTE Y EG VPL TLRA
Sbjct: 121 ALALERRVAFRRAMKQAMQRAMRSGAKGIKVSTSGRLGGAEMARTEGYSEGNVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS-------DSTIPAAEHRVVEK 225
IDYG A A+T YG G+KV++ + + DS +P E + +
Sbjct: 181 DIDYGFAEADTTYGKLGVKVWICKGEILPTRKGPKRELDSVMPKEEKKKPRR 232
>gi|190572950|ref|YP_001970795.1| 30S ribosomal protein S3 [Stenotrophomonas maltophilia K279a]
gi|194364540|ref|YP_002027150.1| 30S ribosomal protein S3 [Stenotrophomonas maltophilia R551-3]
gi|254521448|ref|ZP_05133503.1| ribosomal protein S3 [Stenotrophomonas sp. SKA14]
gi|190010872|emb|CAQ44481.1| putative 30S ribosomal protein S3 [Stenotrophomonas maltophilia
K279a]
gi|194347344|gb|ACF50467.1| ribosomal protein S3 [Stenotrophomonas maltophilia R551-3]
gi|219719039|gb|EED37564.1| ribosomal protein S3 [Stenotrophomonas sp. SKA14]
Length = 244
Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats.
Identities = 120/232 (51%), Positives = 162/232 (69%), Gaps = 6/232 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K++PI RLG++ WNS+W+A +E+ L DLK+RE L+ L QAG++KILIER
Sbjct: 1 MGHKVHPIGIRLGISKDWNSKWYANKAEFAGYLAADLKVREMLRKKLAQAGISKILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ +++ARPG++IGK+G DIEK+RK++S M H++V EV KPE++A L+A+SI
Sbjct: 61 AKTARVTIHTARPGVVIGKRGEDIEKLRKEVSEMMGVPAHINVTEVRKPELDAQLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERR++FRRAMKR+V +AMR GA G+KV GRLNGAE++R+E Y EGRVPL TLRA
Sbjct: 121 AQQLERRIMFRRAMKRSVGNAMRLGALGIKVNVGGRLNGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV------SDSDSTIPAAEHRVVEKD 226
IDYG A A+T YG GIKV++ + + P+ R D
Sbjct: 181 DIDYGFAEAKTTYGIIGIKVWIYKGEVFDFSQVGQEKQDDTPSRNDRHDRGD 232
>gi|187932137|ref|YP_001892122.1| 30S ribosomal protein S3 [Francisella tularensis subsp.
mediasiatica FSC147]
gi|226697715|sp|B2SDX9|RS3_FRATM RecName: Full=30S ribosomal protein S3
gi|187713046|gb|ACD31343.1| 30S ribosomal protein S3 [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 223
Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats.
Identities = 108/227 (47%), Positives = 157/227 (69%), Gaps = 5/227 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP RLG W S W+A S Y L+ED+K+RE+L L A V+KI IER
Sbjct: 1 MGQKVNPNGIRLGYIRDWRSTWYADSSRYATKLNEDIKVREFLHKKLAAAAVSKIQIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+N +I +++ARPG++IGKKG D+EK+R ++ + + +++ EV KPEI+A L+A+S+
Sbjct: 61 AQNAKITIHTARPGIVIGKKGDDVEKLRAEVHKLMGIPVQINIEEVRKPEIDAKLVAESV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+RV+FRRAMK+A+Q+AM+ GA G+K++ SGRL GAE++R+E +GRVPLQT RA
Sbjct: 121 AQQLEKRVMFRRAMKKAMQAAMKSGAKGIKIMVSGRLGGAEIARSEWARDGRVPLQTFRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
+DY TA A T YG G+KV++ + + AE + +K +
Sbjct: 181 DVDYATAEALTTYGVIGVKVWIYKGEILPGQ-----IAEKKNNKKGA 222
>gi|310644196|ref|YP_003948955.1| 30S ribosomal protein s3 [Paenibacillus polymyxa SC2]
gi|309249147|gb|ADO58714.1| 30S ribosomal protein S3 [Paenibacillus polymyxa SC2]
Length = 221
Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats.
Identities = 100/219 (45%), Positives = 154/219 (70%), Gaps = 2/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ R+G+ W S+W+A G ++G LL ED+KIRE+L+ LK + V+++ IER
Sbjct: 1 MGQKVNPVGLRIGIIRDWESKWYA-GKDFGDLLLEDVKIREHLKKRLKDSAVSRVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119
+ +++A+PG++IGK G+++E +R +++ + ++H++++E+ PE++A L+A+S
Sbjct: 60 ANRVNVTIHTAKPGMVIGKGGSEVENLRNEITKIAGGKKVHINISEIKNPELDAILVAES 119
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IAQQLERRV FRRA+K+A+Q MR GA G+K GRL GAE++R+E Y EG VPL TLR
Sbjct: 120 IAQQLERRVSFRRALKQAIQRTMRSGAKGIKTQVGGRLGGAEIARSEGYSEGTVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
A IDYGTA A T YG G+KV++ + + + P
Sbjct: 180 ADIDYGTAEAHTTYGRLGVKVWIYRGEVLPPAKKQAPQE 218
>gi|94266247|ref|ZP_01289954.1| ribosomal protein S3 [delta proteobacterium MLMS-1]
gi|93453173|gb|EAT03637.1| ribosomal protein S3 [delta proteobacterium MLMS-1]
Length = 219
Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats.
Identities = 106/227 (46%), Positives = 150/227 (66%), Gaps = 9/227 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RL + TW+S W+A +Y ED +R+YL+ L AGV++I I RT
Sbjct: 1 MGQKVNPIGLRLNIVRTWDSIWYAD-RDYARNFLEDQSLRKYLKKRLYHAGVSRIQIART 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IGKKG +I+ ++ L T L + EV +PE +A L+A+++
Sbjct: 60 GDKIRVRLHTARPGVVIGKKGAEIDVLKNDLERRTGRSCALDIQEVRRPEADAQLVAENV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERR+ FRRAMK+A+ A++FGA GV++ SGRL GAE+SR E Y EGRVPL TLRA
Sbjct: 120 AQQLERRIAFRRAMKKAINMALKFGAKGVRIACSGRLGGAEMSRREWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYG A A+T YG G+KV++ + +S+ E R E+ +
Sbjct: 180 DIDYGLAEAKTTYGVIGVKVWIFKGEVLSE--------EDRRPEEQA 218
>gi|89053082|ref|YP_508533.1| 30S ribosomal protein S3 [Jannaschia sp. CCS1]
gi|123401403|sp|Q28UV4|RS3_JANSC RecName: Full=30S ribosomal protein S3
gi|88862631|gb|ABD53508.1| SSU ribosomal protein S3P [Jannaschia sp. CCS1]
Length = 247
Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats.
Identities = 128/238 (53%), Positives = 172/238 (72%), Gaps = 13/238 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL------------K 48
MG K+NPI RL VN TW+SRW+A +YG LL ED+KIR+Y++
Sbjct: 1 MGHKVNPIGMRLQVNRTWDSRWYADTKDYGDLLLEDIKIRDYIKKGWWEHVAKRDKRPAG 60
Query: 49 QAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPK 108
AG++KI+IER HK CR+ ++SARPG+IIGKKG DIE +RKKL+ +T+SE+HL++ E+ K
Sbjct: 61 DAGISKIIIERPHKKCRVTIHSARPGVIIGKKGADIEGLRKKLAEITDSELHLNIVEIRK 120
Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168
PE++A L+A+SIAQQLERRV FRRAMKRAVQ+AMR G+ G++V +GRL GAE++RTE Y
Sbjct: 121 PELDARLVAESIAQQLERRVSFRRAMKRAVQNAMRMGSLGIRVNVAGRLGGAEIARTEWY 180
Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
EGRVPL TLRA IDY A AETAYG GIK ++ + E+ + D + + +++
Sbjct: 181 REGRVPLHTLRADIDYAHAEAETAYGIIGIKTWIF-KGEIMEHDPSAHDRRQQELQES 237
>gi|315501427|ref|YP_004080314.1| ribosomal protein s3 [Micromonospora sp. L5]
gi|315408046|gb|ADU06163.1| ribosomal protein S3 [Micromonospora sp. L5]
Length = 295
Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats.
Identities = 103/220 (46%), Positives = 150/220 (68%), Gaps = 2/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG++ W SRWFA Y + ED+KIR + L++AG++K+ IERT
Sbjct: 1 MGQKVHPTGFRLGISTDWKSRWFAD-KLYKDYIGEDVKIRRMMSKGLERAGISKVDIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG+KG + ++IR +L +T ++ L++ EV PE +A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRKGAEADRIRGELEKLTGKQVQLNIIEVKNPESDAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFG-ADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAM+ G++V SGRL GAE+SRTE Y EGRVPL TLR
Sbjct: 120 AEQLSSRVSFRRAMRKAMQSAMKNPACKGIRVQVSGRLGGAEMSRTEFYREGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
A+I+YG A T +G G+KV++ D V ++ AA
Sbjct: 180 ANIEYGFFEARTTFGRIGVKVWIYKGDAVPGREAPAEAAP 219
>gi|255659509|ref|ZP_05404918.1| ribosomal protein S3 [Mitsuokella multacida DSM 20544]
gi|260848061|gb|EEX68068.1| ribosomal protein S3 [Mitsuokella multacida DSM 20544]
Length = 222
Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats.
Identities = 104/219 (47%), Positives = 156/219 (71%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP RLG+ TW+++W+A ++ LHED+KIR+YL+ L+ AGV++I ER+
Sbjct: 1 MGQKVNPHGIRLGIVKTWDAKWYAD-KDFADNLHEDIKIRDYLKNSLQAAGVSRIETERS 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ +++A+PG++IG+ G+ IE+I++ L N T + +++ E+ +P+++ATL+A++I
Sbjct: 60 KNRLKLTIHTAKPGMVIGRGGSGIEQIKEGLKNYTTKRVDINIAEIKQPDMDATLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERR+ FRRAMK+AV MR GA G+K+ SGRL GAE++R E Y EG +PL TLRA
Sbjct: 120 AQQLERRIAFRRAMKQAVGRTMRLGAKGIKIACSGRLGGAEIARKESYREGSIPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDYGTA A T YG GIKV++ + + + AAE
Sbjct: 180 DIDYGTAEAHTTYGRIGIKVWIFKGEVLPERKQAKTAAE 218
>gi|118473160|ref|YP_885825.1| 30S ribosomal protein S3 [Mycobacterium smegmatis str. MC2 155]
gi|152060880|sp|A0QSD7|RS3_MYCS2 RecName: Full=30S ribosomal protein S3
gi|118174447|gb|ABK75343.1| ribosomal protein S3 [Mycobacterium smegmatis str. MC2 155]
Length = 275
Score = 266 bits (681), Expect = 1e-69, Method: Composition-based stats.
Identities = 105/228 (46%), Positives = 148/228 (64%), Gaps = 4/228 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG+ W SRW+A +Y + ED+ IR+ L L++AG+A + IERT
Sbjct: 1 MGQKINPHGFRLGITTEWKSRWYAD-KQYKDYVKEDVAIRKLLATGLERAGIADVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++GT+ ++IR L +T ++ L++ EV PE A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTGKQVQLNILEVKNPESQAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR
Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE--HRVVEK 225
A IDYG A+T +G G+KV++ D V AA R +
Sbjct: 180 ADIDYGLYEAKTTFGRIGVKVWIYKGDIVGGKRELAAAAPASDRPRRE 227
>gi|118465225|ref|YP_883600.1| 30S ribosomal protein S3 [Mycobacterium avium 104]
gi|152060876|sp|A0QL12|RS3_MYCA1 RecName: Full=30S ribosomal protein S3
gi|118166512|gb|ABK67409.1| ribosomal protein S3 [Mycobacterium avium 104]
Length = 280
Score = 266 bits (680), Expect = 1e-69, Method: Composition-based stats.
Identities = 102/215 (47%), Positives = 143/215 (66%), Gaps = 2/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG+ W SRW+A +Y + ED+ IR L L++AG+A + IERT
Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYADYVKEDVAIRRLLSTGLERAGIADVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++GT+ ++IR L +T ++ L++ EV PE A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTGKQVQLNILEVRNPESQAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR
Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
A IDYG A+T +G G+KV++ D V
Sbjct: 180 ADIDYGLYEAKTTFGRIGVKVWIYKGDVVGGKREL 214
>gi|145596428|ref|YP_001160725.1| ribosomal protein S3 [Salinispora tropica CNB-440]
gi|189045333|sp|A4XBP0|RS3_SALTO RecName: Full=30S ribosomal protein S3
gi|145305765|gb|ABP56347.1| SSU ribosomal protein S3P [Salinispora tropica CNB-440]
Length = 288
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 104/227 (45%), Positives = 151/227 (66%), Gaps = 2/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG++ W SRWFA Y + ED+KIR + L++AG++K+ IERT
Sbjct: 1 MGQKVHPHGFRLGISTDWKSRWFAD-KLYKDYVGEDVKIRRMMSKGLERAGISKVDIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG+KG + ++IR KL +T ++ L++ EV PE +A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRKGAEADRIRGKLEKLTGKQVQLNIIEVKSPESDAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFG-ADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAM+ G++V SGRL GAE+SRTE Y EGRVPL TLR
Sbjct: 120 AEQLSSRVSFRRAMRKAMQSAMKNPVCKGIRVQVSGRLGGAEMSRTEFYREGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
A+I+YG A T +G G+KV++ D V ++ A E+
Sbjct: 180 ANIEYGFFEARTTFGRIGVKVWIYKGDAVPGRETPAEAPSRPRRERG 226
>gi|238928149|ref|ZP_04659909.1| 30S ribosomal protein s3 [Selenomonas flueggei ATCC 43531]
gi|238884109|gb|EEQ47747.1| 30S ribosomal protein s3 [Selenomonas flueggei ATCC 43531]
Length = 223
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 101/222 (45%), Positives = 154/222 (69%), Gaps = 1/222 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP RLG+ W++RW+A + LHED+KIR+YL+ L+ AGV ++ ER+
Sbjct: 1 MGQKVNPHGIRLGIVKDWDARWYAD-KNFAQNLHEDIKIRDYLKKSLQTAGVPRVETERS 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ +++A+PG++IG+ G+ IE+I++ L N+T+ + +++ E+ +P+++ATL+A++I
Sbjct: 60 KNRLKLTIHTAKPGMVIGRGGSGIEQIKEGLKNLTDKRVDINIAEIKQPDLDATLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR+ FRRAMK+AV MR GA G+K+ SGRL GAE++R E Y EG +PL TLRA
Sbjct: 120 AAQLERRIAFRRAMKQAVGRTMRLGAKGIKIAVSGRLGGAEIARRESYREGSIPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
IDYGTA A T YG GIKV++ + + D + + R
Sbjct: 180 DIDYGTAEAHTTYGRIGIKVWIFKGEVLPDKKNQPKNGKERS 221
>gi|21230370|ref|NP_636287.1| 30S ribosomal protein S3 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66769636|ref|YP_244398.1| 30S ribosomal protein S3 [Xanthomonas campestris pv. campestris
str. 8004]
gi|188992848|ref|YP_001904858.1| 30S ribosomal protein S3 [Xanthomonas campestris pv. campestris
str. B100]
gi|27734500|sp|Q8PC44|RS3_XANCP RecName: Full=30S ribosomal protein S3
gi|81304409|sp|Q4URE5|RS3_XANC8 RecName: Full=30S ribosomal protein S3
gi|21111926|gb|AAM40211.1| 30S ribosomal protein S3 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66574968|gb|AAY50378.1| 30S ribosomal protein S3 [Xanthomonas campestris pv. campestris
str. 8004]
gi|167734608|emb|CAP52818.1| 30S ribosomal protein S3 [Xanthomonas campestris pv. campestris]
Length = 244
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 116/208 (55%), Positives = 156/208 (75%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K++P RLG+ WNS+W+A +++ A L DLK+RE L+ L QAG++KILIER
Sbjct: 1 MGHKVHPTGIRLGIAKDWNSKWYASKADFAAYLAADLKVREMLRKKLAQAGISKILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ +++ARPG++IGK+G DIEK+RK++S M H++V EV KPE++A L+A+SI
Sbjct: 61 AKTARVTIHTARPGVVIGKRGEDIEKLRKEVSEMMGVPAHINVTEVRKPELDAQLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERR++FRRAMKR+V +AMR GA G+KV +GRLNGAE++R+E Y EGRVPL TLRA
Sbjct: 121 AQQLERRIMFRRAMKRSVGNAMRLGALGIKVNVAGRLNGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
IDYG A A T YG GIKV++ +
Sbjct: 181 DIDYGFAEASTTYGIIGIKVWIYKGEVF 208
>gi|118595329|ref|ZP_01552676.1| 30S ribosomal protein S3 [Methylophilales bacterium HTCC2181]
gi|118441107|gb|EAV47734.1| 30S ribosomal protein S3 [Methylophilales bacterium HTCC2181]
Length = 292
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 122/226 (53%), Positives = 164/226 (72%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI FRLGV W+S+W++ + +LL D+K+RE+L L A V++I+IER
Sbjct: 1 MGQKINPIGFRLGVTKDWSSKWYSNSKNFASLLQNDIKVREFLNKKLANAAVSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN +I +YSARPG++IGKKG DIE +R L ++ + L++ E+ KPE++ATLIAQSI
Sbjct: 61 AKNAKITIYSARPGIVIGKKGEDIETLRSSLQSLMGIPVQLNIEEIRKPEVDATLIAQSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+RV+FRRAMKRA+Q+AMR GA GVK+++SGRLNG E++R+E Y EGRVPL TLRA
Sbjct: 121 AQQLEKRVMFRRAMKRAMQNAMRLGAQGVKIMSSGRLNGIEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDYG A A+T YG GIKV++ + + T+ V E+
Sbjct: 181 DIDYGVARAQTTYGIIGIKVWIFKGERFEEPAKTVNLDNKEVAEEK 226
>gi|302869966|ref|YP_003838603.1| 30S ribosomal protein S3 [Micromonospora aurantiaca ATCC 27029]
gi|302572825|gb|ADL49027.1| ribosomal protein S3 [Micromonospora aurantiaca ATCC 27029]
Length = 295
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 103/220 (46%), Positives = 150/220 (68%), Gaps = 2/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG++ W SRWFA Y + ED+KIR + L++AG++K+ IERT
Sbjct: 1 MGQKVHPTGFRLGISTDWKSRWFAD-KLYKDYIGEDVKIRRMMSKGLERAGISKVDIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG+KG + ++IR +L +T ++ L++ EV PE +A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRKGAEADRIRGELEKLTGKQVQLNIIEVKNPESDAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFG-ADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAM+ G++V SGRL GAE+SRTE Y EGRVPL TLR
Sbjct: 120 AEQLSSRVSFRRAMRKAMQSAMKNPACKGIRVQVSGRLGGAEMSRTEFYREGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
A+I+YG A T +G G+KV++ D V ++ AA
Sbjct: 180 ANIEYGFFEARTTFGRIGVKVWIYKGDAVPGREAPAEAAP 219
>gi|89255676|ref|YP_513037.1| 30S ribosomal protein S3 [Francisella tularensis subsp. holarctica
LVS]
gi|115314177|ref|YP_762900.1| 30S ribosomal protein S3 [Francisella tularensis subsp. holarctica
OSU18]
gi|134302579|ref|YP_001122550.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
WY96-3418]
gi|156501626|ref|YP_001427691.1| 30S ribosomal protein S3 [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|167009883|ref|ZP_02274814.1| ribosomal protein S3 [Francisella tularensis subsp. holarctica
FSC200]
gi|254368628|ref|ZP_04984643.1| hypothetical protein FTAG_01721 [Francisella tularensis subsp.
holarctica FSC022]
gi|290953206|ref|ZP_06557827.1| 30S ribosomal protein S3 [Francisella tularensis subsp. holarctica
URFT1]
gi|295313574|ref|ZP_06804163.1| 30S ribosomal protein S3 [Francisella tularensis subsp. holarctica
URFT1]
gi|122325782|sp|Q0BNS1|RS3_FRATO RecName: Full=30S ribosomal protein S3
gi|123094541|sp|Q2A5G4|RS3_FRATH RecName: Full=30S ribosomal protein S3
gi|152060862|sp|A4IZS8|RS3_FRATW RecName: Full=30S ribosomal protein S3
gi|189045009|sp|A7N9T2|RS3_FRATF RecName: Full=30S ribosomal protein S3
gi|89143507|emb|CAJ78683.1| 30S ribosomal protein S3 [Francisella tularensis subsp. holarctica
LVS]
gi|115129076|gb|ABI82263.1| ribosomal protein S3 [Francisella tularensis subsp. holarctica
OSU18]
gi|134050356|gb|ABO47427.1| ribosomal protein S3 [Francisella tularensis subsp. tularensis
WY96-3418]
gi|156252229|gb|ABU60735.1| ribosomal protein S3 [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|157121536|gb|EDO65721.1| hypothetical protein FTAG_01721 [Francisella tularensis subsp.
holarctica FSC022]
Length = 223
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 108/227 (47%), Positives = 157/227 (69%), Gaps = 5/227 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP RLG W S W+A S Y L+ED+K+RE+L L A V+KI IER
Sbjct: 1 MGQKVNPNGIRLGYIRDWRSTWYADSSRYATKLNEDIKVREFLHKKLAAAAVSKIQIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+N +I +++ARPG++IGKKG D+EK+R ++ + + +++ EV KPEI+A L+A+S+
Sbjct: 61 AQNAKITIHTARPGIVIGKKGEDVEKLRAEVHKLMGIPVQINIEEVRKPEIDAKLVAESV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+RV+FRRAMK+A+Q+AM+ GA G+K++ SGRL GAE++R+E +GRVPLQT RA
Sbjct: 121 AQQLEKRVMFRRAMKKAMQAAMKSGAKGIKIMVSGRLGGAEIARSEWARDGRVPLQTFRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
+DY TA A T YG G+KV++ + + AE + +K +
Sbjct: 181 DVDYATAEALTTYGVIGVKVWIYKGEILPGQ-----IAEKKNNKKGA 222
>gi|269140565|ref|YP_003297266.1| 30S ribosomal protein S3 [Edwardsiella tarda EIB202]
gi|267986226|gb|ACY86055.1| 30S ribosomal protein S3 [Edwardsiella tarda EIB202]
gi|304560353|gb|ADM43017.1| SSU ribosomal protein S3p (S3e) [Edwardsiella tarda FL6-60]
Length = 233
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 110/230 (47%), Positives = 156/230 (67%), Gaps = 4/230 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS W+A E+ L D K+R++L L++A V++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWYANTKEFADNLDSDFKVRQFLNKELEKASVSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK ++ + +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKGVAEIAGVPAQINIAEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QL RRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 TSQLVRRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + + PAA+ + ++
Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRK 230
>gi|313895402|ref|ZP_07828959.1| ribosomal protein S3 [Selenomonas sp. oral taxon 137 str. F0430]
gi|312976297|gb|EFR41755.1| ribosomal protein S3 [Selenomonas sp. oral taxon 137 str. F0430]
Length = 223
Score = 266 bits (680), Expect = 2e-69, Method: Composition-based stats.
Identities = 102/222 (45%), Positives = 155/222 (69%), Gaps = 1/222 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP RLG+ W++RW+A ++ LHED+KIR+YL+ L+ AGV ++ ER+
Sbjct: 1 MGQKVNPHGIRLGIVKDWDARWYAD-KDFAQNLHEDIKIRDYLKKSLQTAGVPRVETERS 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ +++A+PG++IG+ G+ IE+I++ L +T+ + +++ E+ +P+++ATL+A++I
Sbjct: 60 KNRLKLTIHTAKPGMVIGRGGSGIEQIKEGLKGLTDKRVDINIAEIKQPDLDATLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR+ FRRAMK+AV MR GA G+K+ SGRL GAE++R E Y EG +PL TLRA
Sbjct: 120 AAQLERRIAFRRAMKQAVGRTMRLGAKGIKIAVSGRLGGAEIARRESYREGSIPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
IDYGTA A T YG GIKV++ + + D AA+ R
Sbjct: 180 DIDYGTAEAHTTYGRIGIKVWIFKSEVLPDKKQQPKAAKERS 221
>gi|152993899|ref|YP_001359620.1| 30S ribosomal protein S3 [Sulfurovum sp. NBC37-1]
gi|189045340|sp|A6QCQ4|RS3_SULNB RecName: Full=30S ribosomal protein S3
gi|151425760|dbj|BAF73263.1| 30S ribosomal protein S3 [Sulfurovum sp. NBC37-1]
Length = 232
Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 112/227 (49%), Positives = 152/227 (66%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N W SRWF + ED KIR++L+ L AGV+ I+IERT
Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPAKERTADFIAEDYKIRKFLKKELFYAGVSNIIIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K RI + +ARPG+IIGKKG DIEK++ L M ++ +++ E +P+ + L A+++
Sbjct: 61 AKKLRINIITARPGIIIGKKGADIEKLKTTLVKMLGKDVAINIKEEKRPQASGQLAAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV FRRAMK+ +Q A++ GA G+K+ SGRL GAE++RTE YLEGRVPL TLRA
Sbjct: 121 ATQLERRVAFRRAMKKVIQGALKSGAKGIKISVSGRLGGAEMARTEWYLEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYG A A+T YG GIKV++ + ++ PA E + + S
Sbjct: 181 KIDYGFAEAQTTYGIIGIKVWIFKGEVLAKGIQPEPAEEKKGGRRPS 227
>gi|23097580|ref|NP_691046.1| 30S ribosomal protein S3 [Oceanobacillus iheyensis HTE831]
gi|27734493|sp|P59182|RS3_OCEIH RecName: Full=30S ribosomal protein S3
gi|22775803|dbj|BAC12081.1| 30S ribosomal protein S3 [Oceanobacillus iheyensis HTE831]
Length = 213
Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 105/211 (49%), Positives = 148/211 (70%), Gaps = 1/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP R+G+ W S+W+A G +Y LLHED+KIREYL+ L A V+ I IER
Sbjct: 1 MGQKINPTGLRVGIIKDWESKWYA-GKDYADLLHEDIKIREYLENRLSTAAVSSIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++ +PG++IGK G+++E +RK L+N+T +H+++ E+ K +++ATL+A SI
Sbjct: 60 ANRVNITIHTGKPGMVIGKGGSEVEALRKSLNNLTGKRVHINIVEIKKVDLDATLVADSI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRA K+A+Q AMR GA G+K SGRL GA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLENRISFRRAQKQAIQRAMRGGAKGIKTQVSGRLGGADIARAEHYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYGTA A+T YG G+KV++ + +
Sbjct: 180 DIDYGTAEADTTYGKLGVKVWIYRGEVLPTK 210
>gi|269104018|ref|ZP_06156715.1| SSU ribosomal protein S3p (S3e) [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268163916|gb|EEZ42412.1| SSU ribosomal protein S3p (S3e) [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 232
Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 109/230 (47%), Positives = 157/230 (68%), Gaps = 3/230 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WN+ WFA ++ L D K+R++L L +A +++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNTTWFANSQDFADNLDGDFKVRQFLTKELAKASLSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++ L+A SI
Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDGQLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV---SDSDSTIPAAEHRVVEKDS 227
IDY T+ A T YG GIKV++ + + +++ P A+ ++ S
Sbjct: 181 DIDYATSSAHTQYGVIGIKVWIFKGEVLGGMPAANAVEPKADKPKKQRKS 230
>gi|149376678|ref|ZP_01894437.1| 30S ribosomal protein S3 [Marinobacter algicola DG893]
gi|149359051|gb|EDM47516.1| 30S ribosomal protein S3 [Marinobacter algicola DG893]
Length = 227
Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 107/213 (50%), Positives = 155/213 (72%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+NP RLGV NS W+A +EY L D+++RE+L L +A V+KI+IER
Sbjct: 1 MGHKVNPTGMRLGVIKEHNSVWYAEKAEYANNLLNDIQVREFLDKRLVKASVSKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+N RI +++ARPG++IGKKG D++++R+++S+M +H+++ EV KP+++A L+AQ++
Sbjct: 61 AQNARITIHTARPGIVIGKKGEDVDRLRREVSDMMGVPVHINIEEVRKPDLDARLVAQNV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+K+ GRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 AGQLERRVMFRRAMKRAVQNAMRQGAKGIKIQVGGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
IDY T A+T YG G+KV++ + + +
Sbjct: 181 DIDYSTYEAKTTYGIIGVKVWIFKGEILGGMEQ 213
>gi|226939192|ref|YP_002794263.1| 30S ribosomal protein S3 [Laribacter hongkongensis HLHK9]
gi|254764534|sp|C1DAS3|RS3_LARHH RecName: Full=30S ribosomal protein S3
gi|226714116|gb|ACO73254.1| RpsC [Laribacter hongkongensis HLHK9]
Length = 233
Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 115/226 (50%), Positives = 157/226 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V W+S+WFA + +L ED+ +RE+L+ LK A V++I IER
Sbjct: 1 MGQKIDPRGFRLAVTRNWSSKWFANSQNFPGMLKEDIDVREFLKAKLKNASVSRITIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ RI +++ARPG++IGKKG DIE ++++L +H+++ EV KPEI+A +IA I
Sbjct: 61 AKSARITIHTARPGVVIGKKGEDIEVLKQELQKRMGVPVHVNIEEVRKPEIDAQIIADGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV+FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 ASQLEKRVMFRRAMKRAMQNAMRLGALGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
+DY T+ A T YG GIKV+V D S P + + K
Sbjct: 181 DVDYATSEAHTTYGVIGIKVWVYKGDMKPGQVSAEPTQPEKKMRKG 226
>gi|33357880|pdb|1P6G|C Chain C, Real Space Refined Coordinates Of The 30s Subunit Fitted
Into The Low Resolution Cryo-Em Map Of The Ef-G.Gtp
State Of E. Coli 70s Ribosome
gi|33357957|pdb|1P87|C Chain C, Real Space Refined Coordinates Of The 30s Subunit Fitted
Into The Low Resolution Cryo-Em Map Of The
Initiation-Like State Of E. Coli 70s Ribosome
gi|83754041|pdb|2AVY|C Chain C, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli At 3.5 A Resolution. This File Contains
The 30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
gi|83754097|pdb|2AW7|C Chain C, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli At 3.5 A Resolution. This File Contains
The 30s Subunit Of The Second 70s Ribosome. The Entire
Crystal Structure Contains Two 70s Ribosomes And Is
Described In Remark 400.
gi|118138055|pdb|2I2P|C Chain C, Crystal Structure Of Ribosome With Messenger Rna And The
Anticodon Stem-Loop Of P-Site Trna. This File Contains
The 30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
gi|118138126|pdb|2I2U|C Chain C, Crystal Structure Of Ribosome With Messenger Rna And The
Anticodon Stem-Loop Of P-Site Trna. This File Contains
The 30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
gi|157836025|pdb|2QOU|C Chain C, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Spectinomycin. This
File Contains The 30s Subunit Of The First 70s Ribosome,
With Spectinomycin Bound. The Entire Crystal Structure
Contains Two 70s Ribosomes.
gi|157836088|pdb|2QOW|C Chain C, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Spectinomycin. This
File Contains The 30s Subunit Of The Second 70s
Ribosome, With Spectinomycin Bound. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|157836129|pdb|2QOY|C Chain C, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Spectinomycin And
Neomycin. This File Contains The 30s Subunit Of The
First 70s Ribosome, With Spectinomycin And Neomycin
Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes.
gi|157836192|pdb|2QP0|C Chain C, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Spectinomycin And
Neomycin. This File Contains The 30s Subunit Of The
Second 70s Ribosome, With Spectinomycin And Neomycin
Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes.
gi|158429700|pdb|2QAL|C Chain C, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Neomycin. This File
Contains The 30s Subunit Of The First 70s Ribosome, With
Neomycin Bound. The Entire Crystal Structure Contains
Two 70s Ribosomes And Is Described In Remark 400.
gi|158429752|pdb|2QAN|C Chain C, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Neomycin. This File
Contains The 30s Subunit Of The Second 70s Ribosome,
With Neomycin Bound. The Entire Crystal Structure
Contains Two 70s Ribosomes And Is Described In Remark
400.
gi|158429810|pdb|2QB9|C Chain C, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Gentamicin. This File
Contains The 30s Subunit Of The First 70s Ribosome, With
Gentamicin Bound. The Entire Crystal Structure Contains
Two 70s Ribosomes And Is Described In Remark 400.
gi|158429862|pdb|2QBB|C Chain C, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Gentamicin. This File
Contains The 30s Subunit Of The Second 70s Ribosome,
With Gentamicin Bound. The Entire Crystal Structure
Contains Two 70s Ribosomes And Is Described In Remark
400.
gi|158429914|pdb|2QBD|C Chain C, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Ribosome Recycling
Factor (Rrf). This File Contains The 30s Subunit Of The
First 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes And Is Described In Remark
400.
gi|158429966|pdb|2QBF|C Chain C, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Ribosome Recycling
Factor (Rrf). This File Contains The 30s Subunit Of The
Second 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes And Is Described In Remark
400.
gi|158430020|pdb|2QBH|C Chain C, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Gentamicin And Ribosome
Recycling Factor (Rrf). This File Contains The 30s
Subunit Of The First 70s Ribosome, With Gentamicin
Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes And Is Described In Remark 400.
gi|158430073|pdb|2QBJ|C Chain C, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Gentamicin And Ribosome
Recycling Factor (Rrf). This File Contains The 30s
Subunit Of The Second 70s Ribosome, With Gentamicin
Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes And Is Described In Remark 400.
gi|158431373|pdb|2Z4K|C Chain C, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Paromomycin And
Ribosome Recycling Factor (Rrf). This File Contains The
30s Subunit Of The First 70s Ribosome, With Paromomycin
Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes And Is Described In Remark 400.
gi|158431426|pdb|2Z4M|C Chain C, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Paromomycin And
Ribosome Recycling Factor (Rrf). This File Contains The
30s Subunit Of The Second 70s Ribosome, With Paromomycin
Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes And Is Described In Remark 400.
gi|168988790|pdb|2VHO|C Chain C, Structure Of Pdf Binding Helix In Complex With The
Ribosome (Part 3 Of 4)
gi|168988811|pdb|2VHP|C Chain C, Structure Of Pdf Binding Helix In Complex With The
Ribosome (Part 4 Of 4)
gi|197107280|pdb|3DF1|C Chain C, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Hygromycin B. This File
Contains The 30s Subunit Of The First 70s Ribosome, With
Hygromycin B Bound. The Entire Crystal Structure
Contains Two 70s Ribosomes.
gi|197107332|pdb|3DF3|C Chain C, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Hygromycin B. This File
Contains The 30s Subunit Of The Second 70s Ribosome,
With Hygromycin B Bound. The Entire Crystal Structure
Contains Two 70s Ribosomes.
gi|329665994|pdb|3J00|C Chain C, Structure Of The Ribosome-Secye Complex In The Membrane
Environment
Length = 232
Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 112/229 (48%), Positives = 156/229 (68%), Gaps = 4/229 (1%)
Query: 2 GQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTH 61
GQK++P RLG+ WNS WFA E+ L D K+R+YL L +A V++I+IER
Sbjct: 1 GQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPA 60
Query: 62 KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIA 121
K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI
Sbjct: 61 KSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSIT 120
Query: 122 QQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH 181
QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 SQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD 180
Query: 182 IDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + + PAA+ + ++
Sbjct: 181 IDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRK 229
>gi|85709051|ref|ZP_01040117.1| 30S ribosomal protein S3 [Erythrobacter sp. NAP1]
gi|85690585|gb|EAQ30588.1| 30S ribosomal protein S3 [Erythrobacter sp. NAP1]
Length = 231
Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 127/225 (56%), Positives = 168/225 (74%), Gaps = 4/225 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RL +N TW+SRW+A G +Y LL ED+K+R+Y+ L QA ++K++IER
Sbjct: 1 MGQKSNPIGLRLQINRTWDSRWYAEGRDYAGLLAEDIKMRKYILESLPQAAISKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K CR+ +Y+ARPG+IIGKKG DIEK+R KLS MT+SE+ L++ E+ KPEI+A L+AQ +
Sbjct: 61 AKLCRVSIYAARPGVIIGKKGADIEKLRAKLSTMTSSEVKLNIVEIRKPEIDAKLVAQGV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL RRV FRRAMKRAVQSA+R GA+G+K++ GRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 ADQLVRRVAFRRAMKRAVQSALRLGAEGIKIVCGGRLGGAEIARVEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
+IDY A TAYG GIKV++ + E+ D P A+ R++ +
Sbjct: 181 NIDYAETEALTAYGIIGIKVWIF-KGEILAHD---PTAQDRLMME 221
>gi|108797992|ref|YP_638189.1| 30S ribosomal protein S3 [Mycobacterium sp. MCS]
gi|119867088|ref|YP_937040.1| 30S ribosomal protein S3 [Mycobacterium sp. KMS]
gi|126433654|ref|YP_001069345.1| 30S ribosomal protein S3 [Mycobacterium sp. JLS]
gi|123070587|sp|Q1BDA1|RS3_MYCSS RecName: Full=30S ribosomal protein S3
gi|152060881|sp|A3PVC7|RS3_MYCSJ RecName: Full=30S ribosomal protein S3
gi|152060882|sp|A1UBP2|RS3_MYCSK RecName: Full=30S ribosomal protein S3
gi|108768411|gb|ABG07133.1| SSU ribosomal protein S3P [Mycobacterium sp. MCS]
gi|119693177|gb|ABL90250.1| SSU ribosomal protein S3P [Mycobacterium sp. KMS]
gi|126233454|gb|ABN96854.1| SSU ribosomal protein S3P [Mycobacterium sp. JLS]
Length = 287
Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 105/229 (45%), Positives = 147/229 (64%), Gaps = 5/229 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG+ W SRW+A +Y + ED+ IR L L++AG+A + IERT
Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYKDYVKEDVAIRRLLATGLERAGIADVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++GT+ ++IR L +T ++ L++ EV PE A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTKKQVQLNILEVKNPESVAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR
Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS---TIPAAEHRVVEK 225
A IDYG A+T +G G+KV++ D V PA R +
Sbjct: 180 ADIDYGLYEAKTTFGRIGVKVWIYKGDIVGGKRELTAAAPAGADRPRRE 228
>gi|152964663|ref|YP_001360447.1| ribosomal protein S3 [Kineococcus radiotolerans SRS30216]
gi|189045014|sp|A6W5U4|RS3_KINRD RecName: Full=30S ribosomal protein S3
gi|151359180|gb|ABS02183.1| ribosomal protein S3 [Kineococcus radiotolerans SRS30216]
Length = 282
Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 101/229 (44%), Positives = 150/229 (65%), Gaps = 4/229 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQK+NP FRLG+ SRWFA G Y + ED+ IR + +++AG++K+
Sbjct: 1 MGQKVNPFGFRLGITTDHRSRWFADSTKTGQRYADYVKEDVAIRRLMSKGMERAGISKVE 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV PE++A L+
Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRIRTELEKLTGKQVQLNILEVKNPEVDAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ +A+QL RV FRRAM++ +Q+ MR GA G++V +GRL GAE+SR+E Y EGRVPL
Sbjct: 121 AQGVAEQLASRVSFRRAMRKGMQTTMRSGAKGIRVQCAGRLGGAEMSRSEFYREGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
TLRA+IDYG A T +G G+KV++ D S + AA R +
Sbjct: 181 TLRANIDYGFYEARTTFGRIGVKVWIYHGDITSRELAQSQAAAPRAPRR 229
>gi|146328784|ref|YP_001210145.1| 30S ribosomal protein S3 [Dichelobacter nodosus VCS1703A]
gi|172047328|sp|A5EX93|RS3_DICNV RecName: Full=30S ribosomal protein S3
gi|146232254|gb|ABQ13232.1| 30S ribosomal protein S3 [Dichelobacter nodosus VCS1703A]
Length = 239
Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 112/227 (49%), Positives = 157/227 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+PI FRLGV+ W S+W+A G++Y L +D ++RE+L+ L A V+KI IER
Sbjct: 1 MGQKIHPIGFRLGVSKDWTSKWYAEGTDYANYLEKDFEVREFLRKKLAHASVSKIQIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I +++ARPG++IGKKG DIE ++K++ + +++ E+ +PE+++ L+A +I
Sbjct: 61 RNGAQITIFTARPGIVIGKKGEDIEILKKEVGKILGVATSINIEEIRRPELDSYLVADNI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLERRV+FRRAMKRAV S MR GA GVKV SGRLNGAE++RTE Y EGRVPL TLRA
Sbjct: 121 AKQLERRVMFRRAMKRAVASTMRLGAVGVKVSISGRLNGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYG A A T YG G+KV++ + + ++ EK +
Sbjct: 181 DIDYGLAEAYTTYGVIGVKVWIFKGENLEGLEADTSNTNELSDEKRN 227
>gi|37528537|ref|NP_931882.1| 30S ribosomal protein S3 [Photorhabdus luminescens subsp. laumondii
TTO1]
gi|61215674|sp|Q7MYF7|RS3_PHOLL RecName: Full=30S ribosomal protein S3
gi|36787975|emb|CAE17092.1| 30S ribosomal protein S3 [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 233
Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 109/230 (47%), Positives = 158/230 (68%), Gaps = 4/230 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS W+A E+ L D K+R+YL+ L +A +++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWYANTKEFADNLDSDFKVRQYLKKELAKASISRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK ++ + ++++EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKTVAEIAGVPAQINISEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERR++FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 TSQLERRIMFRRAMKRAVQNAMRQGAKGIKVEVSGRLGGAEIARPEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + + + PAA+ + ++
Sbjct: 181 DIDYNTSEAHTTYGVLGVKVWIFKGEILGGMAAVEQAEKPAAQPKKQQRK 230
>gi|152998265|ref|YP_001343100.1| 30S ribosomal protein S3 [Marinomonas sp. MWYL1]
gi|150839189|gb|ABR73165.1| ribosomal protein S3 [Marinomonas sp. MWYL1]
Length = 226
Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 109/226 (48%), Positives = 152/226 (67%), Gaps = 2/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ S W+A Y LL DL++R +L+ L QA V++I I+R
Sbjct: 1 MGQKVHPTGIRLGIVKDHTSTWYANNQNYSKLLLNDLQVRAFLEKKLVQASVSRIEIQRP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ RI +++ARPG++IGKKG D+EK+R +S M +H+++ E+ KPE++A L+AQ+I
Sbjct: 61 AQTARITIHTARPGIVIGKKGEDVEKLRNAVSEMMGVPVHINIEEIRKPEMDAKLVAQNI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRAGAKGIKVQVSGRLGGAEIARAEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA--AEHRVVE 224
IDY T A T YG G+KV++ + + + A+ + +
Sbjct: 181 DIDYATYEAATTYGIIGVKVWIFKGEILGGIEQVRADKGAQKKKSK 226
>gi|260893366|ref|YP_003239463.1| ribosomal protein S3 [Ammonifex degensii KC4]
gi|260865507|gb|ACX52613.1| ribosomal protein S3 [Ammonifex degensii KC4]
Length = 220
Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 98/211 (46%), Positives = 146/211 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WN++W+A ++ L ED+KIR +++ AGV+ I+IER
Sbjct: 1 MGQKVDPRGLRLGIIRDWNAKWYAENKDFANFLLEDVKIRRHIKQKFYHAGVSNIVIERM 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG+ G ++E +R++L MT ++ +++ E+ PE++A L+A++I
Sbjct: 61 ANRIRVTIHTARPGMVIGRGGAEVENLRRELEEMTGKQVSINIVEIKVPELDAQLVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A Q+ERRV +RRAMK+A+ AMR GA G+KV SGRL GAE++RTE EGRVPL TLRA
Sbjct: 121 ASQIERRVAYRRAMKQAIARAMRMGAKGIKVEVSGRLAGAEIARTEWLREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYG A A T YG G+KV++ D +
Sbjct: 181 DIDYGFAEAITTYGKIGVKVWIYKGDVLPQR 211
>gi|157690906|ref|YP_001485368.1| 30S ribosomal protein S3 [Bacillus pumilus SAFR-032]
gi|194017609|ref|ZP_03056220.1| ribosomal protein S3 [Bacillus pumilus ATCC 7061]
gi|172045995|sp|A8F991|RS3_BACP2 RecName: Full=30S ribosomal protein S3
gi|157679664|gb|ABV60808.1| ribosomal protein S3 [Bacillus pumilus SAFR-032]
gi|194010881|gb|EDW20452.1| ribosomal protein S3 [Bacillus pumilus ATCC 7061]
Length = 218
Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 99/219 (45%), Positives = 151/219 (68%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ R+GV W S+WFA G +Y LHEDLKIRE++ L A V+K+ IER
Sbjct: 1 MGQKVNPVGLRIGVIRDWESKWFA-GKDYADFLHEDLKIREFISKRLSDASVSKVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK G+++E +RK L+++T +H+++ E+ + +++A L+A++I
Sbjct: 60 ANRVNITIHTAKPGMVIGKGGSEVEALRKALNSLTGKRVHINILEIKRADLDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRA K+ +Q MR GA G+K + SGRL GA+++R+E Y EG VPL TLRA
Sbjct: 120 ARQLENRISFRRAQKQTIQRTMRAGAQGIKTMVSGRLGGADIARSEYYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDY TA A+T YG G+KV++ + + +T +
Sbjct: 180 DIDYATAEADTTYGKLGVKVWIYRGEVLPTKKNTAEGGK 218
>gi|304310022|ref|YP_003809620.1| 30S ribosomal protein S3 [gamma proteobacterium HdN1]
gi|301795755|emb|CBL43954.1| 30S ribosomal protein S3 [gamma proteobacterium HdN1]
Length = 227
Score = 266 bits (679), Expect = 2e-69, Method: Composition-based stats.
Identities = 114/223 (51%), Positives = 156/223 (69%), Gaps = 2/223 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ +S W+A +G L +D+K+REYL LK A V++I IER
Sbjct: 1 MGQKVHPTGIRLGIVKKHSSTWYASPKNFGDYLLKDIKVREYLSEKLKAASVSRIEIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+N RI + +ARPG++IGKKG D+EK+RK+++++ +H+++ E+ KPE++A L+A+ I
Sbjct: 61 AENARITIKTARPGIVIGKKGEDVEKLRKEVASIMQVPVHINIEEIRKPELDAKLVAEGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ MR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQGTMRLGAKGIKVQVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD--STIPAAEHR 221
IDY TA AET YGS G+KV++ + + + A R
Sbjct: 181 DIDYATARAETTYGSIGVKVWIFKGEVLGGVEPVEDTKVAPKR 223
>gi|153869561|ref|ZP_01999135.1| 30S ribosomal protein S3 [Beggiatoa sp. PS]
gi|152073947|gb|EDN70859.1| 30S ribosomal protein S3 [Beggiatoa sp. PS]
Length = 211
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 109/209 (52%), Positives = 154/209 (73%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI RLG+ W+S+W+A +Y L+ DLK+R +++ L A V+++ IER
Sbjct: 1 MGQKVHPIGMRLGIIKDWSSKWYANSQDYPVYLNTDLKVRAFIKKKLAPASVSEVRIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+N RII+++ARPG++IGKKG DI+K+R +S M +H+SV E+ KPE++A L+A S+
Sbjct: 61 ARNARIIIHTARPGIVIGKKGEDIDKLRAIVSKMMGIPVHISVEEIRKPELDAYLVAVSV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR++FRRAMKR V +AMR GA G+++ SGRLNGAE++RTE Y EGRVPL TLRA
Sbjct: 121 ASQLERRIMFRRAMKRVVGNAMRLGAQGIRINVSGRLNGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVS 209
IDYG A A+T YG G+KV++ + +
Sbjct: 181 DIDYGFAEAQTTYGIIGVKVWIFKGEIIG 209
>gi|308070969|ref|YP_003872574.1| 30S ribosomal protein S3 [Paenibacillus polymyxa E681]
gi|305860248|gb|ADM72036.1| 30S ribosomal protein S3 [Paenibacillus polymyxa E681]
Length = 221
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 99/219 (45%), Positives = 154/219 (70%), Gaps = 2/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ R+G+ W S+W+A G ++G LL ED++IRE+L+ LK + V+++ IER
Sbjct: 1 MGQKVNPVGLRIGIIRDWESKWYA-GKDFGDLLLEDVRIREHLKKRLKDSAVSRVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119
+ +++A+PG++IGK G+++E +R +++ + ++H++++E+ PE++A L+A+S
Sbjct: 60 ANRVNVTIHTAKPGMVIGKGGSEVENLRNEITKIAGGKKVHINISEIKNPELDAILVAES 119
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IAQQLERRV FRRA+K+A+Q MR GA G+K GRL GAE++R+E Y EG VPL TLR
Sbjct: 120 IAQQLERRVSFRRALKQAIQRTMRSGAKGIKTQVGGRLGGAEIARSEGYSEGTVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
A IDYGTA A T YG G+KV++ + + + P
Sbjct: 180 ADIDYGTAEAHTTYGRLGVKVWIYRGEVLPPAKKQAPQE 218
>gi|317126867|ref|YP_004093149.1| ribosomal protein S3 [Bacillus cellulosilyticus DSM 2522]
gi|315471815|gb|ADU28418.1| ribosomal protein S3 [Bacillus cellulosilyticus DSM 2522]
Length = 219
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 100/211 (47%), Positives = 149/211 (70%), Gaps = 1/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+G+ W S+W+A +Y LLHED+KIREYL+ LK+A ++ + IER
Sbjct: 1 MGQKVNPTGLRVGIIKDWESKWYAD-KDYADLLHEDIKIREYLEKRLKEASLSTVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +Y+A+PG++IGK G+++E +RK L+ +T +H+++NEV P+++A L+A ++
Sbjct: 60 ANRVNVTIYTAKPGMVIGKGGSEVEALRKALNQLTGKRVHININEVKYPDMDARLVADNV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRAMK+ +Q MR GA G+K SGRL GA+++R+E Y EG VPL TLRA
Sbjct: 120 ARQLENRISFRRAMKQVIQRTMRSGAKGIKTEVSGRLGGADIARSESYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYGTA A+T YG G+KV++ + +
Sbjct: 180 DIDYGTAEADTTYGKLGVKVWIYRGEVLPTK 210
>gi|238025938|ref|YP_002910169.1| 30S ribosomal protein S3 [Burkholderia glumae BGR1]
gi|330815255|ref|YP_004358960.1| 30S ribosomal protein S3 [Burkholderia gladioli BSR3]
gi|237875132|gb|ACR27465.1| 30S ribosomal protein S3 [Burkholderia glumae BGR1]
gi|327367648|gb|AEA59004.1| 30S ribosomal protein S3 [Burkholderia gladioli BSR3]
Length = 266
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 116/229 (50%), Positives = 164/229 (71%), Gaps = 2/229 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V+ W SRW+A + + A+L ED+ +REYL+ LK A V +++IER
Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNNNFAAMLQEDIGVREYLKKKLKNASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI +YS+RPG++IGKKG DIE ++ +L +H+++ E+ KPE +A LIA SI
Sbjct: 61 AKNARITIYSSRPGVVIGKKGEDIELLKTELQRRMGVPVHVNIEEIRKPETDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLERR++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI--PAAEHRVVEKDS 227
IDY T+ A+T YG G+KV+V D + +D+ + E + +++
Sbjct: 181 DIDYATSEAKTTYGIIGVKVWVYKGDTLGRNDAPVVEEVTEDKRPRRNA 229
>gi|323141362|ref|ZP_08076253.1| ribosomal protein S3 [Phascolarctobacterium sp. YIT 12067]
gi|322414111|gb|EFY04939.1| ribosomal protein S3 [Phascolarctobacterium sp. YIT 12067]
Length = 222
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 103/223 (46%), Positives = 152/223 (68%), Gaps = 1/223 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+S+W+A G +Y L ED+KIRE+++ L +G++K+ IER
Sbjct: 1 MGQKVNPHGLRVGVIKGWDSKWYA-GKDYEKFLLEDIKIREFIKEKLFLSGISKVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
RI +++A+PG++IG++G++IE ++ L MT S I +++ EV P+++ATL+A++I
Sbjct: 60 SNKARISIHTAKPGMVIGRQGSNIELLKSDLKKMTESAIEINIVEVKTPDMDATLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR+ FRRAMK+ V MR GA G+K+ GRL GAE++R+E Y EG +PL TLRA
Sbjct: 120 AAQLERRIAFRRAMKQCVGRTMRMGAKGIKITCGGRLGGAEIARSESYREGSIPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223
IDYGTA A T YG GIKV++ + + +S A +
Sbjct: 180 DIDYGTAEAHTTYGRIGIKVWIYKGEVLPESKEAAKVAPAKEA 222
>gi|88801213|ref|ZP_01116754.1| ribosomal protein S3 [Reinekea sp. MED297]
gi|88776051|gb|EAR07285.1| ribosomal protein S3 [Reinekea sp. MED297]
Length = 228
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 107/226 (47%), Positives = 159/226 (70%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ NS W+A Y L D+++R YL+ L++A V+KI+IER
Sbjct: 1 MGQKVHPTGIRLGIVKDHNSVWYAGSDTYSEKLLNDIEVRAYLEKKLEKASVSKIIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+N +I +++ARPG++IGKKG D+E +R++L+ M +H+++ E+ KP+++ L+AQSI
Sbjct: 61 AQNAKITIHTARPGIVIGKKGEDVELLRQELTQMMGIPVHINIEEIRKPDLDGKLVAQSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRA+Q+AMR GA+G++V SGRL GAE++R+E YLEGRVPL TLRA
Sbjct: 121 AGQLERRVMFRRAMKRAMQNAMRGGAEGIRVQVSGRLGGAEIARSEWYLEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDY TA A T YG G+KV++ + + + ++ + +
Sbjct: 181 DIDYATAEANTTYGIIGVKVWIFKGEVLGGIEEVRAKSKAQPKKNS 226
>gi|167582617|ref|ZP_02375491.1| 30S ribosomal protein S3 [Burkholderia thailandensis TXDOH]
gi|167838206|ref|ZP_02465065.1| 30S ribosomal protein S3 [Burkholderia thailandensis MSMB43]
Length = 266
Score = 265 bits (678), Expect = 3e-69, Method: Composition-based stats.
Identities = 115/229 (50%), Positives = 164/229 (71%), Gaps = 2/229 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V+ W SRW+A + + A+L ED+ +REYL+ LK A V +++IER
Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNNNFAAMLQEDIGVREYLKKKLKNASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI ++S+RPG++IGKKG DIE ++ +L +H+++ E+ KPE +A LIA SI
Sbjct: 61 AKNARITIFSSRPGVVIGKKGEDIELLKTELQRRMGVPVHVNIEEIRKPETDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLERR++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI--PAAEHRVVEKDS 227
IDY T+ A+T YG G+KV+V D + +D+ + E + +++
Sbjct: 181 DIDYATSEAKTTYGVIGVKVWVYKGDTLGRNDAPVVEEVTEDKRPRRNA 229
>gi|119468274|ref|ZP_01611400.1| 30S ribosomal subunit protein S3 [Alteromonadales bacterium TW-7]
gi|119448267|gb|EAW29531.1| 30S ribosomal subunit protein S3 [Alteromonadales bacterium TW-7]
Length = 233
Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats.
Identities = 104/210 (49%), Positives = 149/210 (70%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG++ W S W+A ++ L D K+R +L LK A V+KI+IER
Sbjct: 1 MGQKVHPTGIRLGISKPWVSTWYASSKDFSDQLFGDHKVRAFLTKELKTASVSKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R+ ++ + ++++EV KPE++A L+A I
Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRQAVTKIAGVPAQINISEVRKPELDAQLVADGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKR+VQ+AMR G+ G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRSVQNAMRIGSKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210
IDY T+ A T YG G+KV++ + +
Sbjct: 181 DIDYATSEALTTYGIIGVKVWIFKGEVIGG 210
>gi|15827996|ref|NP_302259.1| 30S ribosomal protein S3 [Mycobacterium leprae TN]
gi|3122828|sp|O32987|RS3_MYCLE RecName: Full=30S ribosomal protein S3
gi|2344838|emb|CAB11440.1| ribosomal protein S3 [Mycobacterium leprae]
gi|13093549|emb|CAC30811.1| 30S ribosomal protein S3 [Mycobacterium leprae]
Length = 281
Score = 265 bits (677), Expect = 3e-69, Method: Composition-based stats.
Identities = 105/229 (45%), Positives = 147/229 (64%), Gaps = 5/229 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG+ W SRW+A +Y + ED+ IR L L++AG+A + IERT
Sbjct: 1 MGQKINPHGFRLGITTGWKSRWYAD-KQYAEYVKEDVAIRRLLSTGLERAGIADVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++GT+ ++IR L +T ++ L++ EV PE A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTCKQVQLNILEVKNPESQAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR
Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS---TIPAAEHRVVEK 225
A IDYG A+T +G G+KV++ D V PA R +
Sbjct: 180 ADIDYGLHEAKTTFGRIGVKVWIYKGDIVGGKREVTAVAPAGAERARRE 228
>gi|221230473|ref|YP_002503889.1| 30S ribosomal protein S3 [Mycobacterium leprae Br4923]
gi|254764537|sp|B8ZSB3|RS3_MYCLB RecName: Full=30S ribosomal protein S3
gi|219933580|emb|CAR71953.1| 30S ribosomal protein S3 [Mycobacterium leprae Br4923]
Length = 281
Score = 265 bits (677), Expect = 4e-69, Method: Composition-based stats.
Identities = 105/229 (45%), Positives = 147/229 (64%), Gaps = 5/229 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG+ W SRW+A +Y + ED+ IR L L++AG+A + IERT
Sbjct: 1 MGQKINPHGFRLGITTGWKSRWYAD-KQYAEYVKEDVAIRRLLSTGLERAGIADVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++GT+ ++IR L +T ++ L++ EV PE A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTCKQVQLNILEVKNPESQAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR
Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS---TIPAAEHRVVEK 225
A IDYG A+T +G G+KV++ D V PA R +
Sbjct: 180 ADIDYGLHEAKTTFGRIGVKVWIYKGDIVGGKREVTAVAPAGAERARRE 228
>gi|77359122|ref|YP_338697.1| 30S ribosomal protein S3 [Pseudoalteromonas haloplanktis TAC125]
gi|91207832|sp|Q3IF19|RS3_PSEHT RecName: Full=30S ribosomal protein S3
gi|76874033|emb|CAI85254.1| 30S ribosomal subunit protein S3 [Pseudoalteromonas haloplanktis
TAC125]
Length = 233
Score = 264 bits (676), Expect = 4e-69, Method: Composition-based stats.
Identities = 106/210 (50%), Positives = 150/210 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG++ W S W+A ++ A L D K+R +L LK A V+KI+IER
Sbjct: 1 MGQKVHPTGIRLGISKPWVSTWYASSKDFSAQLFGDHKVRTFLTKELKTASVSKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R+ ++ + ++++EV KPE++A L+A I
Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRQAVTKIAGVPAQINISEVRKPELDAQLVADGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKR+VQ+AMR G+ G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRSVQNAMRIGSKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210
IDY T+ A T YG G+KV++ + +
Sbjct: 181 DIDYATSEALTTYGIIGVKVWIFKGEVIGG 210
>gi|295106945|emb|CBL04488.1| SSU ribosomal protein S3P [Gordonibacter pamelaeae 7-10-1-b]
Length = 237
Score = 264 bits (676), Expect = 4e-69, Method: Composition-based stats.
Identities = 108/219 (49%), Positives = 150/219 (68%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG+ W SRW++ +Y L DL IR++L +L +A V+K+ IER
Sbjct: 1 MGQKVSPTGFRLGITEDWRSRWYSD-KDYAKNLENDLAIRKFLDKYLARAAVSKVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++IV +ARPG++IGKKG +I+ +RKKL + + + + V EV +PE++A LIAQS+
Sbjct: 60 GDKIKVIVTTARPGVVIGKKGAEIDSLRKKLEKVASGPVSIEVVEVKRPELDAALIAQSV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRAM++AVQSA + GA G+++ SGRL GAE+SR E Y EGRVPL TLRA
Sbjct: 120 AEQLEGRVAFRRAMRKAVQSARKSGAKGIRIQCSGRLGGAEMSRREWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDYG A T GS G++V+V + + + PA E
Sbjct: 180 KIDYGFCTAATTMGSIGVQVWVYHGEMLPGQKAPNPALE 218
>gi|294496991|ref|YP_003560691.1| 30S ribosomal protein S3 [Bacillus megaterium QM B1551]
gi|295702356|ref|YP_003595431.1| 30S ribosomal protein S3 [Bacillus megaterium DSM 319]
gi|294346928|gb|ADE67257.1| 30S ribosomal protein S3 [Bacillus megaterium QM B1551]
gi|294800015|gb|ADF37081.1| 30S ribosomal protein S3 [Bacillus megaterium DSM 319]
Length = 218
Score = 264 bits (676), Expect = 4e-69, Method: Composition-based stats.
Identities = 102/219 (46%), Positives = 151/219 (68%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ R+GV W SRWFA G +Y LLHEDLK+REY+ L A V+K+ IER
Sbjct: 1 MGQKVNPVGLRVGVIRDWESRWFA-GKDYADLLHEDLKVREYIAKRLNDAAVSKVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK GT++E +RK L+ +T +H+++ E+ + +++A L+A++I
Sbjct: 60 ANRLNVTIHTAKPGMVIGKGGTEVESLRKALNQLTGKRVHINILEIKRADLDAKLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRA K+A+Q +MR GA G+K + SGRL GA+++R+E Y EG VPL TLRA
Sbjct: 120 ARQLENRVSFRRAQKQAIQRSMRAGAQGIKTMVSGRLGGADIARSEYYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDY A A+T YG G+KV++ + + T +
Sbjct: 180 DIDYAHAEADTTYGKLGVKVWIYRGEVLPTKKKTEEGGK 218
>gi|90409296|ref|ZP_01217393.1| 30S ribosomal protein S3 [Psychromonas sp. CNPT3]
gi|90309590|gb|EAS37778.1| 30S ribosomal protein S3 [Psychromonas sp. CNPT3]
Length = 229
Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats.
Identities = 106/226 (46%), Positives = 149/226 (65%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ ++S W+A E+ L D IR++L LK A ++K+ IER
Sbjct: 1 MGQKVHPNGIRLGITKAFSSTWYAGKKEFADNLFSDHLIRKFLTEKLKNASLSKVTIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ M ++++EV KPE++A L+A SI
Sbjct: 61 AKSVRVTIHTARPGVVIGKKGEDVEKLRTAIAKMAGVPAQINISEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
+ QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 SSQLERRVMFRRAMKRAVQNAMRLGAKGIKVQVSGRLGGAEIARAEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + + + K
Sbjct: 181 DIDYSTSEALTVYGIIGVKVWIFKGEVLGGLPLQQEQQPSKPKRKG 226
>gi|56707484|ref|YP_169380.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
SCHU S4]
gi|110669955|ref|YP_666512.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
FSC198]
gi|61215376|sp|Q5NHW2|RS3_FRATT RecName: Full=30S ribosomal protein S3
gi|123063579|sp|Q14JB4|RS3_FRAT1 RecName: Full=30S ribosomal protein S3
gi|56603976|emb|CAG44964.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
SCHU S4]
gi|110320288|emb|CAL08347.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
FSC198]
gi|282158628|gb|ADA78019.1| 30S ribosomal protein S3 [Francisella tularensis subsp. tularensis
NE061598]
Length = 222
Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats.
Identities = 105/222 (47%), Positives = 153/222 (68%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP RLG W S W+A S Y L+ED+K+RE+L L A V+KI IER
Sbjct: 1 MGQKVNPNGIRLGYIRDWRSTWYADSSRYATKLNEDIKVREFLHKKLAAAAVSKIQIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+N +I +++AR G++IGKKG D+EK+R ++ + + +++ EV KPEI+A L+A+S+
Sbjct: 61 AQNAKITIHTARSGIVIGKKGEDVEKLRAEVHKLMGIPVQINIEEVRKPEIDAKLVAESV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+RV+FRRAMK+A+Q+AM+ GA G+K++ SGRL GAE++R+E +GRVPLQT RA
Sbjct: 121 AQQLEKRVMFRRAMKKAMQAAMKSGAKGIKIMVSGRLGGAEIARSEWARDGRVPLQTFRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
+DY TA A T YG G+KV++ + + + + R
Sbjct: 181 DVDYATAEALTTYGVIGVKVWIYKGEILPGQIAEKKNNKKRS 222
>gi|119718119|ref|YP_925084.1| 30S ribosomal protein S3 [Nocardioides sp. JS614]
gi|152060887|sp|A1SNL2|RS3_NOCSJ RecName: Full=30S ribosomal protein S3
gi|119538780|gb|ABL83397.1| SSU ribosomal protein S3P [Nocardioides sp. JS614]
Length = 278
Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats.
Identities = 100/207 (48%), Positives = 148/207 (71%), Gaps = 1/207 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG++ SRW+A Y + + ED+ IR+ L +++AG+AK+ IERT
Sbjct: 1 MGQKINPNGFRLGISTDHKSRWYAD-KLYKSYVGEDVAIRKLLSKGMERAGIAKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV PE++A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQVQLNILEVKNPEVDAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++A+Q++MR GA G+++ SGRLNGAE+SRTE Y EGRVPL TLRA
Sbjct: 120 AEQLSGRVQFRRAMRKAMQTSMRSGAKGIRIQCSGRLNGAEMSRTEFYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207
IDYG A T +G G+KV++ +
Sbjct: 180 DIDYGFYEARTTFGRIGVKVWIYKGEV 206
>gi|152980649|ref|YP_001355095.1| small subunit ribosomal protein S3 [Janthinobacterium sp.
Marseille]
gi|189045013|sp|A6T3J8|RS3_JANMA RecName: Full=30S ribosomal protein S3
gi|151280726|gb|ABR89136.1| small subunit ribosomal protein S3 [Janthinobacterium sp.
Marseille]
Length = 283
Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats.
Identities = 118/215 (54%), Positives = 160/215 (74%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V+ W SRW+A S + +L+EDLK+R YL+ LK A V +++IER
Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYAGNSNFATMLNEDLKVRAYLKTKLKNASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI +YS+RPG++IGKKG DIE ++ L+ M +H+++ E+ KPE +A LIA SI
Sbjct: 61 AKNARITIYSSRPGVVIGKKGEDIEVLKSALTKMMGVPVHVNIEEIRKPETDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++R E Y EGRVPL TLRA
Sbjct: 121 AQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARKEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDYG AET YG GIKV+V D +++ ++ +
Sbjct: 181 DIDYGFGEAETTYGIIGIKVWVYKGDRLANGEAPV 215
>gi|53720815|ref|YP_109801.1| 30S ribosomal protein S3 [Burkholderia pseudomallei K96243]
gi|53723848|ref|YP_104160.1| 30S ribosomal protein S3 [Burkholderia mallei ATCC 23344]
gi|76811070|ref|YP_335134.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 1710b]
gi|121601078|ref|YP_994450.1| 30S ribosomal protein S3 [Burkholderia mallei SAVP1]
gi|124383473|ref|YP_001027901.1| 30S ribosomal protein S3 [Burkholderia mallei NCTC 10229]
gi|126441331|ref|YP_001060744.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 668]
gi|126450100|ref|YP_001082996.1| 30S ribosomal protein S3 [Burkholderia mallei NCTC 10247]
gi|126452567|ref|YP_001068028.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 1106a]
gi|134283153|ref|ZP_01769854.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 305]
gi|167001693|ref|ZP_02267485.1| 30S ribosomal protein S3 [Burkholderia mallei PRL-20]
gi|167721571|ref|ZP_02404807.1| 30S ribosomal protein S3 [Burkholderia pseudomallei DM98]
gi|167740545|ref|ZP_02413319.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 14]
gi|167817750|ref|ZP_02449430.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 91]
gi|167826147|ref|ZP_02457618.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 9]
gi|167847659|ref|ZP_02473167.1| 30S ribosomal protein S3 [Burkholderia pseudomallei B7210]
gi|167896231|ref|ZP_02483633.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 7894]
gi|167904613|ref|ZP_02491818.1| 30S ribosomal protein S3 [Burkholderia pseudomallei NCTC 13177]
gi|167912878|ref|ZP_02499969.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 112]
gi|167920838|ref|ZP_02507929.1| 30S ribosomal protein S3 [Burkholderia pseudomallei BCC215]
gi|217424767|ref|ZP_03456264.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 576]
gi|226198160|ref|ZP_03793731.1| 30S ribosomal protein S3 [Burkholderia pseudomallei Pakistan 9]
gi|237814139|ref|YP_002898590.1| ribosomal protein S3 [Burkholderia pseudomallei MSHR346]
gi|242315858|ref|ZP_04814874.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 1106b]
gi|254174687|ref|ZP_04881348.1| 30S ribosomal protein S3 [Burkholderia mallei ATCC 10399]
gi|254180345|ref|ZP_04886943.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 1655]
gi|254190308|ref|ZP_04896816.1| 30S ribosomal protein S3 [Burkholderia pseudomallei Pasteur 52237]
gi|254198497|ref|ZP_04904918.1| 30S ribosomal protein S3 [Burkholderia pseudomallei S13]
gi|254201233|ref|ZP_04907597.1| 30S ribosomal protein S3 [Burkholderia mallei FMH]
gi|254206574|ref|ZP_04912925.1| 30S ribosomal protein S3 [Burkholderia mallei JHU]
gi|254259494|ref|ZP_04950548.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 1710a]
gi|254300582|ref|ZP_04968027.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 406e]
gi|254357112|ref|ZP_04973386.1| 30S ribosomal protein S3 [Burkholderia mallei 2002721280]
gi|61215449|sp|Q62GL1|RS3_BURMA RecName: Full=30S ribosomal protein S3
gi|61215462|sp|Q63Q17|RS3_BURPS RecName: Full=30S ribosomal protein S3
gi|91207643|sp|Q3JMR9|RS3_BURP1 RecName: Full=30S ribosomal protein S3
gi|152060851|sp|A3P0A7|RS3_BURP0 RecName: Full=30S ribosomal protein S3
gi|189044957|sp|A3MRW0|RS3_BURM7 RecName: Full=30S ribosomal protein S3
gi|189044958|sp|A2S7I2|RS3_BURM9 RecName: Full=30S ribosomal protein S3
gi|189044959|sp|A1V897|RS3_BURMS RecName: Full=30S ribosomal protein S3
gi|189044960|sp|A3NEH3|RS3_BURP6 RecName: Full=30S ribosomal protein S3
gi|52211229|emb|CAH37218.1| 30S ribosomal protein S3 [Burkholderia pseudomallei K96243]
gi|52427271|gb|AAU47864.1| ribosomal protein S3 [Burkholderia mallei ATCC 23344]
gi|76580523|gb|ABA49998.1| ribosomal protein S3 [Burkholderia pseudomallei 1710b]
gi|121229888|gb|ABM52406.1| 30S ribosomal protein S3 [Burkholderia mallei SAVP1]
gi|124291493|gb|ABN00762.1| 30S ribosomal protein S3 [Burkholderia mallei NCTC 10229]
gi|126220824|gb|ABN84330.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 668]
gi|126226209|gb|ABN89749.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 1106a]
gi|126242970|gb|ABO06063.1| 30S ribosomal protein S3 [Burkholderia mallei NCTC 10247]
gi|134245348|gb|EBA45441.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 305]
gi|147747127|gb|EDK54203.1| 30S ribosomal protein S3 [Burkholderia mallei FMH]
gi|147752116|gb|EDK59182.1| 30S ribosomal protein S3 [Burkholderia mallei JHU]
gi|148026176|gb|EDK84261.1| 30S ribosomal protein S3 [Burkholderia mallei 2002721280]
gi|157810491|gb|EDO87661.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 406e]
gi|157937984|gb|EDO93654.1| 30S ribosomal protein S3 [Burkholderia pseudomallei Pasteur 52237]
gi|160695732|gb|EDP85702.1| 30S ribosomal protein S3 [Burkholderia mallei ATCC 10399]
gi|169655237|gb|EDS87930.1| 30S ribosomal protein S3 [Burkholderia pseudomallei S13]
gi|184210884|gb|EDU07927.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 1655]
gi|217392223|gb|EEC32248.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 576]
gi|225929680|gb|EEH25696.1| 30S ribosomal protein S3 [Burkholderia pseudomallei Pakistan 9]
gi|237503075|gb|ACQ95393.1| ribosomal protein S3 [Burkholderia pseudomallei MSHR346]
gi|242139097|gb|EES25499.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 1106b]
gi|243062590|gb|EES44776.1| 30S ribosomal protein S3 [Burkholderia mallei PRL-20]
gi|254218183|gb|EET07567.1| 30S ribosomal protein S3 [Burkholderia pseudomallei 1710a]
Length = 266
Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats.
Identities = 115/229 (50%), Positives = 164/229 (71%), Gaps = 2/229 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V+ W SRW+A + + A+L ED+ +REYL+ LK A V +++IER
Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNNNFAAMLQEDIGVREYLKKKLKNASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI ++S+RPG++IGKKG DIE ++ +L +H+++ E+ KPE +A LIA SI
Sbjct: 61 AKNARITIFSSRPGVVIGKKGEDIELLKTELQRRMGVPVHVNIEEIRKPETDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLERR++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI--PAAEHRVVEKDS 227
IDY T+ A+T YG G+KV+V D + +D+ + E + +++
Sbjct: 181 DIDYATSEAKTTYGIIGVKVWVYKGDTLGRNDAPVVEEVTEDKRPRRNA 229
>gi|83719069|ref|YP_443566.1| 30S ribosomal protein S3 [Burkholderia thailandensis E264]
gi|167620731|ref|ZP_02389362.1| 30S ribosomal protein S3 [Burkholderia thailandensis Bt4]
gi|123726556|sp|Q2SU33|RS3_BURTA RecName: Full=30S ribosomal protein S3
gi|83652894|gb|ABC36957.1| ribosomal protein S3 [Burkholderia thailandensis E264]
Length = 266
Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats.
Identities = 115/229 (50%), Positives = 164/229 (71%), Gaps = 2/229 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V+ W SRW+A + + A+L ED+ +REYL+ LK A V +++IER
Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNNNFAAMLQEDIGVREYLKKKLKNASVGRVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI ++S+RPG++IGKKG DIE ++ +L +H+++ E+ KPE +A LIA SI
Sbjct: 61 AKNARITIFSSRPGVVIGKKGEDIELLKTELQRRMGVPVHVNIEEIRKPETDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLERR++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI--PAAEHRVVEKDS 227
IDY T+ A+T YG G+KV+V D + +D+ + E + +++
Sbjct: 181 DIDYATSEAKTTYGVIGVKVWVYKGDTLGRNDAPVVEEVTEDKRPRRNA 229
>gi|87122977|ref|ZP_01078838.1| 30S ribosomal protein S3 [Marinomonas sp. MED121]
gi|86161745|gb|EAQ63049.1| 30S ribosomal protein S3 [Marinomonas sp. MED121]
Length = 226
Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats.
Identities = 109/226 (48%), Positives = 154/226 (68%), Gaps = 2/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ S W+A Y LL DL++R+YL+ L QA V++I I+R
Sbjct: 1 MGQKVHPTGIRLGIVKDHTSTWYANNQNYSKLLLNDLQVRKYLEGKLVQASVSRIEIQRP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ RI +++ARPG++IGKKG D+EK+R +S+M +H+++ E+ KPE++A L+AQ+I
Sbjct: 61 AQSARITIHTARPGIVIGKKGEDVEKLRNAVSDMMGVPVHINIEEIRKPELDAKLVAQNI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AGQLERRVMFRRAMKRAVQNAMRAGAKGIKVQVSGRLGGAEIARAEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS--TIPAAEHRVVE 224
IDY T A T YG G+K ++ + + + A+ + +
Sbjct: 181 DIDYATYEANTTYGIIGVKTWIFKGEILGGIEQVRANKGAQKKKSK 226
>gi|313884389|ref|ZP_07818150.1| ribosomal protein S3 [Eremococcus coleocola ACS-139-V-Col8]
gi|312620173|gb|EFR31601.1| ribosomal protein S3 [Eremococcus coleocola ACS-139-V-Col8]
Length = 219
Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats.
Identities = 95/219 (43%), Positives = 145/219 (66%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+G+ W+++WFA Y LHEDL+IR Y+ L A V++I IER
Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWFANNKNYADFLHEDLRIRNYVYGKLTDASVSQIQIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G +++ +R LS +T ++H+++ E+ +P ++A L+A I
Sbjct: 61 ANRVIVSIHTAKPGMVIGKGGAEVDTLRNDLSKLTGKKVHINIVEIKEPSLDAKLVALDI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE RV FRRA K+A+Q MR GA G+K SGRLNGA+++RTE Y EG VPL TLR+
Sbjct: 121 AQQLENRVAFRRAQKQAIQRVMRAGAQGIKTQVSGRLNGADMARTEHYSEGTVPLHTLRS 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDY A+T YG G+KV++ + + +++ +
Sbjct: 181 DIDYAWEEADTTYGKIGVKVWICRGEILPGQENSGKGGK 219
>gi|297717886|gb|ADI50086.1| SSU ribosomal protein S3p [Candidatus Odyssella thessalonicensis
L13]
Length = 225
Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats.
Identities = 115/208 (55%), Positives = 162/208 (77%), Gaps = 1/208 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ RLG+N W+SRWF+ +Y LH+DL+IR +++ +L QAGVAK++IER
Sbjct: 1 MGQKVNPVGLRLGINKLWDSRWFS-KKDYAKNLHQDLEIRRFVEKNLAQAGVAKVVIERL 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ +++ARPG++IGKKG DI+K+RKKLS++ N+++ +++ EV KPEI+A LIA++I
Sbjct: 60 AKKARLTIHTARPGVLIGKKGADIDKLRKKLSDIANTDVTINLVEVRKPEIDAKLIAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQ+ERRV FRRAMKRA+QS++R GA G++V SGRL GAE++R E Y EGRVPL TLR+
Sbjct: 120 AQQIERRVSFRRAMKRAMQSSLRLGAQGIRVNCSGRLGGAEIARMEWYREGRVPLHTLRS 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
+DY A+T YG GIKV+V + +
Sbjct: 180 DVDYALGEAKTTYGIIGIKVWVYKGEIL 207
>gi|297537537|ref|YP_003673306.1| 30S ribosomal protein S3 [Methylotenera sp. 301]
gi|297256884|gb|ADI28729.1| ribosomal protein S3 [Methylotenera sp. 301]
Length = 241
Score = 264 bits (676), Expect = 5e-69, Method: Composition-based stats.
Identities = 124/211 (58%), Positives = 158/211 (74%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+PI FRL V W+SRW+A + A+L D+K+RE+L L A V++ILIER
Sbjct: 1 MGQKIHPIGFRLSVQKNWSSRWYANSKNFPAMLQGDIKVREFLNKKLASAAVSRILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN +I +YSARPG++IGKKG DIE +R L + +HL++ EV KPEI+ATLIAQSI
Sbjct: 61 AKNAKITIYSARPGVVIGKKGEDIESLRATLQGLMGVPVHLNIEEVRKPEIDATLIAQSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+RV+FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLEKRVMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYG A A T YG GIKV+V + + +
Sbjct: 181 DIDYGVAEASTTYGIIGIKVWVFKGEIFAGN 211
>gi|304438368|ref|ZP_07398309.1| 30S ribosomal protein S3 [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304368734|gb|EFM22418.1| 30S ribosomal protein S3 [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 223
Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats.
Identities = 100/222 (45%), Positives = 152/222 (68%), Gaps = 1/222 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP RLG+ W++RW+A ++ LHED+KIR+YL+ L+ AGV ++ ER+
Sbjct: 1 MGQKVNPHGIRLGIVKDWDARWYAD-KDFAQNLHEDIKIRDYLKKSLQTAGVPRVETERS 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ +++A+PG++IG+ G+ IE+I++ L +T + +++ E+ +P+++ATL+A++I
Sbjct: 60 KNRLKLTIHTAKPGMVIGRGGSGIEQIKEGLKGLTEKRVDINIAEIKQPDLDATLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR+ FRRAMK+AV MR GA G+K+ SGRL GAE++R E Y EG +PL TLRA
Sbjct: 120 AAQLERRIAFRRAMKQAVGRTMRLGAKGIKIAVSGRLGGAEIARRESYREGSIPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
IDYGTA A T YG GIKV++ + + D + R
Sbjct: 180 DIDYGTAEAHTTYGRIGIKVWIFKGEVLPDKKQAPKNNKERS 221
>gi|289579136|ref|YP_003477763.1| ribosomal protein S3 [Thermoanaerobacter italicus Ab9]
gi|289528849|gb|ADD03201.1| ribosomal protein S3 [Thermoanaerobacter italicus Ab9]
Length = 221
Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats.
Identities = 100/218 (45%), Positives = 151/218 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+GV W ++W+A + LL ED+KIR Y++ L AG++KI+IER
Sbjct: 1 MGQKVHPYGLRVGVTQDWLAKWYADDKNFSKLLIEDIKIRNYIKEKLYAAGISKIVIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I +++A+PG++IGK G I+K+R++L MTN + L++ EV PE++A L+A+++
Sbjct: 61 SNRIKIDIHAAKPGMVIGKGGAGIDKLREELEKMTNKTVILNIVEVKTPELSAQLVAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A Q+E+R+ +RRAMK+A+ AM+ GA G+K+ SGRL GAE++RTE Y EG VPLQTLRA
Sbjct: 121 AAQIEKRISYRRAMKQAIARAMKLGAKGIKIACSGRLAGAEIARTERYHEGVVPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
IDYG A A T YG G+KV+++ + + + A
Sbjct: 181 DIDYGFAEANTTYGKIGVKVWINKGEILPQPKKQVTAE 218
>gi|133924|sp|P23309|RS3_BACST RecName: Full=30S ribosomal protein S3; AltName: Full=BS2; AltName:
Full=BS3/BS4
gi|580921|emb|CAA38740.1| ribosomal protein S3 [Geobacillus stearothermophilus]
Length = 218
Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats.
Identities = 100/219 (45%), Positives = 148/219 (67%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI R+G+ W SRW+A +Y L+HEDLKIREY+ L+ A V+++ IER
Sbjct: 1 MGQKVNPIGLRIGIIRDWESRWYAE-KDYADLVHEDLKIREYINKRLQDAAVSRVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G+++E +RK L+ +T H+++ E+ KP+++A L+A++I
Sbjct: 60 ANRVNVTIHTAKPGMVIGKGGSEVEALRKALTQLTGKREHINIVEIKKPDLDAKLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRA K+A+Q AMR G GVK + RL GAE++R+E Y EG VPL TLRA
Sbjct: 120 ARQLENRVSFRRAQKQAIQRAMRPGRKGVKTMVVRRLGGAEIARSEHYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDY TA A+T YG G+KV++ + + +
Sbjct: 180 DIDYATAEADTTYGKIGVKVWIYRGEVLPTKKKAEEGGK 218
>gi|315125268|ref|YP_004067271.1| 30S ribosomal protein S3 [Pseudoalteromonas sp. SM9913]
gi|315013781|gb|ADT67119.1| 30S ribosomal protein S3 [Pseudoalteromonas sp. SM9913]
Length = 233
Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats.
Identities = 105/210 (50%), Positives = 150/210 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG++ W S W+A ++ A L D K+R +L LK A V+KI+IER
Sbjct: 1 MGQKVHPTGIRLGISKPWVSTWYANSKDFSAQLFGDHKVRTFLTKELKAASVSKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R+ ++ + ++++EV KPE++A L+A I
Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRQAVTKIAGVPAQINISEVRKPELDAQLVADGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKR+VQ+AMR G+ G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRSVQNAMRIGSKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210
IDY T+ A T YG G+KV++ + +
Sbjct: 181 DIDYATSEALTTYGIIGVKVWIFKGEVIGG 210
>gi|255020771|ref|ZP_05292829.1| SSU ribosomal protein S3p (S3e) [Acidithiobacillus caldus ATCC
51756]
gi|254969767|gb|EET27271.1| SSU ribosomal protein S3p (S3e) [Acidithiobacillus caldus ATCC
51756]
Length = 220
Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats.
Identities = 109/221 (49%), Positives = 163/221 (73%), Gaps = 1/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ WNSRW+++G ++ L ED+++RE+++ L A +++I+IER
Sbjct: 1 MGQKTNPIGLRLGIIKNWNSRWYSKG-DFKDKLVEDIRVREFIRKRLGGAAISQIVIERP 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ RI +++ARPG++IGKKG DIEK+R + +H++V E+ KPE++A L+A+S+
Sbjct: 60 ARSARITLHTARPGVVIGKKGEDIEKLRLDVQRQMGVPVHINVEEIRKPELDAQLVAESV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERR++FRRAMKRAV +AMRFGA G+++ +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 120 AQQLERRIMFRRAMKRAVTNAMRFGAKGMRINCAGRLGGAEIARTEWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
IDYG A A+T YG G+KV++ + + S + +++ +
Sbjct: 180 DIDYGFAEAKTTYGIIGVKVWIFKGEILEWSTAQGGSSQQK 220
>gi|15607847|ref|NP_215221.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis H37Rv]
gi|15840114|ref|NP_335151.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis CDC1551]
gi|31791892|ref|NP_854385.1| 30S ribosomal protein S3 [Mycobacterium bovis AF2122/97]
gi|121636629|ref|YP_976852.1| 30S ribosomal protein S3 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148660482|ref|YP_001282005.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis H37Ra]
gi|148821912|ref|YP_001286666.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis F11]
gi|215402491|ref|ZP_03414672.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis 02_1987]
gi|215425949|ref|ZP_03423868.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis T92]
gi|215429548|ref|ZP_03427467.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis EAS054]
gi|218752357|ref|ZP_03531153.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis GM 1503]
gi|219556556|ref|ZP_03535632.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis T17]
gi|224989101|ref|YP_002643788.1| 30S ribosomal protein S3 [Mycobacterium bovis BCG str. Tokyo 172]
gi|253797650|ref|YP_003030651.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis KZN 1435]
gi|254231027|ref|ZP_04924354.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis C]
gi|254549668|ref|ZP_05140115.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260185589|ref|ZP_05763063.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis CPHL_A]
gi|260199717|ref|ZP_05767208.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis T46]
gi|260203878|ref|ZP_05771369.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis K85]
gi|289442108|ref|ZP_06431852.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis T46]
gi|289446267|ref|ZP_06436011.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis CPHL_A]
gi|289552964|ref|ZP_06442174.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis KZN 605]
gi|289568651|ref|ZP_06448878.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis T17]
gi|289573315|ref|ZP_06453542.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis K85]
gi|289744431|ref|ZP_06503809.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis 02_1987]
gi|289749214|ref|ZP_06508592.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis T92]
gi|289752754|ref|ZP_06512132.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis EAS054]
gi|289760834|ref|ZP_06520212.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis GM 1503]
gi|294996202|ref|ZP_06801893.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis 210]
gi|297633206|ref|ZP_06950986.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis KZN 4207]
gi|297730186|ref|ZP_06959304.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis KZN R506]
gi|306774818|ref|ZP_07413155.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis SUMu001]
gi|306781449|ref|ZP_07419786.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis SUMu002]
gi|306783359|ref|ZP_07421681.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis SUMu003]
gi|306787729|ref|ZP_07426051.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis SUMu004]
gi|306794497|ref|ZP_07432799.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis SUMu005]
gi|306796462|ref|ZP_07434764.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis SUMu006]
gi|306806531|ref|ZP_07443199.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis SUMu007]
gi|306970920|ref|ZP_07483581.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis SUMu010]
gi|307078650|ref|ZP_07487820.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis SUMu011]
gi|307083214|ref|ZP_07492327.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis SUMu012]
gi|313657513|ref|ZP_07814393.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis KZN V2475]
gi|61236258|sp|P0A5X6|RS3_MYCTU RecName: Full=30S ribosomal protein S3
gi|61236268|sp|P0A5X7|RS3_MYCBO RecName: Full=30S ribosomal protein S3
gi|152060877|sp|A1KGI8|RS3_MYCBP RecName: Full=30S ribosomal protein S3
gi|189045021|sp|A5U093|RS3_MYCTA RecName: Full=30S ribosomal protein S3
gi|254764536|sp|C1AL41|RS3_MYCBT RecName: Full=30S ribosomal protein S3
gi|1806175|emb|CAB06470.1| PROBABLE 30S RIBOSOMAL PROTEIN S3 RPSC [Mycobacterium tuberculosis
H37Rv]
gi|13880264|gb|AAK44965.1| ribosomal protein S3 [Mycobacterium tuberculosis CDC1551]
gi|31617479|emb|CAD93589.1| PROBABLE 30S RIBOSOMAL PROTEIN S3 RPSC [Mycobacterium bovis
AF2122/97]
gi|121492276|emb|CAL70743.1| Probable 30S ribosomal protein S3 rpsC [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|124600086|gb|EAY59096.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis C]
gi|148504634|gb|ABQ72443.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis H37Ra]
gi|148720439|gb|ABR05064.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis F11]
gi|224772214|dbj|BAH25020.1| 30S ribosomal protein S3 [Mycobacterium bovis BCG str. Tokyo 172]
gi|253319153|gb|ACT23756.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis KZN 1435]
gi|289415027|gb|EFD12267.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis T46]
gi|289419225|gb|EFD16426.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis CPHL_A]
gi|289437596|gb|EFD20089.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis KZN 605]
gi|289537746|gb|EFD42324.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis K85]
gi|289542405|gb|EFD46053.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis T17]
gi|289684959|gb|EFD52447.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis 02_1987]
gi|289689801|gb|EFD57230.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis T92]
gi|289693341|gb|EFD60770.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis EAS054]
gi|289708340|gb|EFD72356.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis GM 1503]
gi|308216708|gb|EFO76107.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis SUMu001]
gi|308325750|gb|EFP14601.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis SUMu002]
gi|308331853|gb|EFP20704.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis SUMu003]
gi|308335640|gb|EFP24491.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis SUMu004]
gi|308337097|gb|EFP25948.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis SUMu005]
gi|308343121|gb|EFP31972.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis SUMu006]
gi|308347008|gb|EFP35859.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis SUMu007]
gi|308359541|gb|EFP48392.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis SUMu010]
gi|308363446|gb|EFP52297.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis SUMu011]
gi|308367084|gb|EFP55935.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis SUMu012]
gi|323720834|gb|EGB29901.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis CDC1551A]
gi|326905071|gb|EGE52004.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis W-148]
gi|328457431|gb|AEB02854.1| 30S ribosomal protein S3 rpsC [Mycobacterium tuberculosis KZN 4207]
Length = 274
Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats.
Identities = 102/215 (47%), Positives = 143/215 (66%), Gaps = 2/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG+ W SRW+A +Y + ED+ IR L L++AG+A + IERT
Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYAEYVKEDVAIRRLLSSGLERAGIADVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++GT+ ++IR L +T ++ L++ EV PE A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTGKQVQLNILEVKNPESQAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR
Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
A IDYG A+T +G G+KV++ D V
Sbjct: 180 ADIDYGLYEAKTTFGRIGVKVWIYKGDIVGGKREL 214
>gi|294341604|emb|CAZ90021.1| 30S ribosomal protein S3 [Thiomonas sp. 3As]
Length = 274
Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats.
Identities = 121/226 (53%), Positives = 159/226 (70%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V W SRW+A ++Y +L ED+ +REYL LK A V+++LIER
Sbjct: 1 MGQKIHPTGFRLAVTRGWASRWYAPSTQYAKMLSEDIMVREYLAKRLKNASVSRVLIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI +YSARPG++IGKKG DIE ++ +L+ + + + EV KPEI+A LIA SI
Sbjct: 61 AKNARITIYSARPGVVIGKKGEDIENLKAELAKRLGVPVAVDIEEVRKPEIDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLE+R+ FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++R E Y EGRVPLQTLRA
Sbjct: 121 TQQLEKRIQFRRAMKRAMQNAMRMGAQGIKIMSSGRLNGIEIARREWYREGRVPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
+IDY T+ A+T YG G+KV+V D + AE E+D
Sbjct: 181 NIDYATSEAKTTYGVIGVKVWVYKGDTPAKGAIVPAKAEPAAPEED 226
>gi|296137300|ref|YP_003644542.1| ribosomal protein S3 [Thiomonas intermedia K12]
gi|295797422|gb|ADG32212.1| ribosomal protein S3 [Thiomonas intermedia K12]
Length = 278
Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats.
Identities = 121/226 (53%), Positives = 159/226 (70%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V W SRW+A ++Y +L ED+ +REYL LK A V+++LIER
Sbjct: 1 MGQKIHPTGFRLAVTRGWASRWYAPSTQYAKMLSEDIMVREYLAKRLKNASVSRVLIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI +YSARPG++IGKKG DIE ++ +L+ + + + EV KPEI+A LIA SI
Sbjct: 61 AKNARITIYSARPGVVIGKKGEDIENLKAELAKRLGVPVAVDIEEVRKPEIDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLE+R+ FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++R E Y EGRVPLQTLRA
Sbjct: 121 TQQLEKRIQFRRAMKRAMQNAMRMGAQGIKIMSSGRLNGIEIARREWYREGRVPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
+IDY T+ A+T YG G+KV+V D + AE E+D
Sbjct: 181 NIDYATSEAKTTYGVIGVKVWVYKGDTPAKGAIVPAKAEPAAPEED 226
>gi|296141109|ref|YP_003648352.1| ribosomal protein S3 [Tsukamurella paurometabola DSM 20162]
gi|296029243|gb|ADG80013.1| ribosomal protein S3 [Tsukamurella paurometabola DSM 20162]
Length = 268
Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats.
Identities = 102/219 (46%), Positives = 146/219 (66%), Gaps = 2/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG+ W SRW+A +Y + ED+ IR+ L L++AG++KI IERT
Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYAEYVKEDVAIRKKLTDGLERAGISKIEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV E +A L+AQ I
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRSELEKLTGKQVQLNILEVKNSEADAQLVAQGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR
Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
A IDYG A+T +G G+KV++ D V +
Sbjct: 180 ADIDYGLHEAKTTFGRIGVKVWIYKGDVVGGRRELAAPS 218
>gi|91774641|ref|YP_544397.1| 30S ribosomal protein S3 [Methylobacillus flagellatus KT]
gi|123078974|sp|Q1H4N1|RS3_METFK RecName: Full=30S ribosomal protein S3
gi|91708628|gb|ABE48556.1| SSU ribosomal protein S3P [Methylobacillus flagellatus KT]
Length = 236
Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats.
Identities = 126/228 (55%), Positives = 164/228 (71%), Gaps = 2/228 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V W+SRW+A + + A+L D+K+RE+L+ L A V+KI+IER
Sbjct: 1 MGQKIHPFGFRLSVQKNWSSRWYANSNNFPAMLSSDIKVREFLKKKLAHAAVSKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN +I +YSARPG++IGKKG DIE +R L + +HL++ EV KPEI+ATLIA+SI
Sbjct: 61 AKNAKITIYSARPGIVIGKKGEDIESLRSGLQGLMGVPVHLNIEEVRKPEIDATLIAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+RV+FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLEKRVMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI--PAAEHRVVEKD 226
IDYG A A+T YG GIKV+V + + PA + V K
Sbjct: 181 DIDYGVAEAKTTYGIIGIKVWVFKGEVFGNKIEQAAQPAEPEKKVRKS 228
>gi|258651369|ref|YP_003200525.1| 30S ribosomal protein S3 [Nakamurella multipartita DSM 44233]
gi|258554594|gb|ACV77536.1| ribosomal protein S3 [Nakamurella multipartita DSM 44233]
Length = 279
Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats.
Identities = 98/210 (46%), Positives = 148/210 (70%), Gaps = 2/210 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG+ WNSRW+A Y + ED++IR+ + +++AG++K+ IERT
Sbjct: 1 MGQKINPHGFRLGITTDWNSRWYAD-KSYADYVAEDVQIRKLMSKGMERAGISKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV PE +A L+AQ++
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGQLEKLTGKQVQLNILEVRNPESDAQLVAQAV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMR-FGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++++QSA R G+++ SGRL GAE+SR+E Y EGRVPL TLR
Sbjct: 120 AEQLSNRVSFRRAMRKSMQSAQRSPQVKGIRIQCSGRLGGAEMSRSEFYREGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVS 209
A IDYG A+T +G G+KV++ D+V
Sbjct: 180 ADIDYGFFEAKTTFGRIGVKVWIYKGDKVG 209
>gi|299065421|emb|CBJ36590.1| 30S ribosomal subunit protein S3 [Ralstonia solanacearum CMR15]
Length = 265
Score = 264 bits (675), Expect = 6e-69, Method: Composition-based stats.
Identities = 116/225 (51%), Positives = 162/225 (72%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V+ W SRW+A +++ +L ED+++RE+L+ LK A V +++IER
Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNTQFAGMLKEDIEVREFLKKKLKNASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI +YS+RPG++IGKKG DIE ++ +L +H+++ E+ KPE++A LIA SI
Sbjct: 61 AKNARITIYSSRPGVVIGKKGEDIELLKAELQRRMGVPVHVNIEEIRKPEVDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLERR++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDYG + AET YG G+KV+V D + +D+ + K
Sbjct: 181 DIDYGFSEAETTYGIIGVKVWVYKGDHLGRNDAPVVEEPQEERRK 225
>gi|127511098|ref|YP_001092295.1| 30S ribosomal protein S3 [Shewanella loihica PV-4]
gi|152060904|sp|A3Q988|RS3_SHELP RecName: Full=30S ribosomal protein S3
gi|126636393|gb|ABO22036.1| SSU ribosomal protein S3P [Shewanella loihica PV-4]
Length = 229
Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats.
Identities = 110/225 (48%), Positives = 157/225 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ W S W+A S+Y L D ++R++L+ LKQA V+KI+IER
Sbjct: 1 MGQKVHPNGIRLGITKPWISTWYADKSDYANNLSSDWEVRKFLEKKLKQASVSKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R +++ +T +++ E+ KPE++A L+A+ I
Sbjct: 61 AKSVRVTIHTARPGVVIGKKGEDVEKLRNEVAKLTGIPAQINIAEIRKPELDAKLVAEGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY TA + T YG G+KV+V + + + + + K
Sbjct: 181 DIDYSTAESHTQYGVIGVKVWVFKGEVLDGVVPALEEPKQQPKRK 225
>gi|319654874|ref|ZP_08008949.1| 30S ribosomal protein S3 [Bacillus sp. 2_A_57_CT2]
gi|317393437|gb|EFV74200.1| 30S ribosomal protein S3 [Bacillus sp. 2_A_57_CT2]
Length = 218
Score = 264 bits (675), Expect = 7e-69, Method: Composition-based stats.
Identities = 103/214 (48%), Positives = 151/214 (70%), Gaps = 1/214 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ R+GV W S+W+A G +Y LLHEDLK+REY+ L A V+K+ IER
Sbjct: 1 MGQKVNPVGLRVGVIRDWESKWYA-GKDYADLLHEDLKVREYITKRLSDASVSKVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK GT++E +RK L+++T +H+++ E+ + +I+A L+A++I
Sbjct: 60 ANRLNITIHTAKPGMVIGKGGTEVEALRKSLNSLTGKRVHINILEIKRADIDAKLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRA K+ +Q AMR GA G+K + SGRL GA+++R+E Y EG VPL TLRA
Sbjct: 120 ARQLENRVSFRRAQKQTIQRAMRAGAKGIKTMVSGRLGGADIARSESYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
IDY TA A+T YG G+KV++ + + T
Sbjct: 180 DIDYATAEADTTYGKLGVKVWIYRGEVLPTKKKT 213
>gi|139438586|ref|ZP_01772102.1| Hypothetical protein COLAER_01100 [Collinsella aerofaciens ATCC
25986]
gi|133776125|gb|EBA39945.1| Hypothetical protein COLAER_01100 [Collinsella aerofaciens ATCC
25986]
Length = 236
Score = 264 bits (674), Expect = 7e-69, Method: Composition-based stats.
Identities = 109/222 (49%), Positives = 154/222 (69%), Gaps = 4/222 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+ P FRLG+ W SRWFA +Y L DL+IR+YL+ L +A V+++ IER
Sbjct: 1 MGQKVYPTGFRLGITENWRSRWFAE-KDYAKTLGNDLEIRKYLEKRLSRAAVSRVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPKPEINATLIA 117
++I+ +ARPG++IGKKG +I+ +R +L + + ++ + V E+ +PE++A L+A
Sbjct: 60 GDKVKVIILTARPGVVIGKKGAEIDTLRTELEKVAGVSKGQLSVDVVEIKRPELDANLVA 119
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
QSIA+QLE RV FRRAM++AVQSA + GA G+++ SGRL GAE+ R E Y EGRVPL T
Sbjct: 120 QSIAEQLEGRVAFRRAMRKAVQSARKAGAKGIRIQCSGRLGGAEMGRREWYREGRVPLHT 179
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
LRA IDYGTAVA T G+CG+KV++ L +++ PA E
Sbjct: 180 LRAKIDYGTAVASTTMGACGVKVWIYLGEKLPGQPVPNPALE 221
>gi|148652244|ref|YP_001279337.1| 30S ribosomal protein S3 [Psychrobacter sp. PRwf-1]
gi|189045300|sp|A5WCJ6|RS3_PSYWF RecName: Full=30S ribosomal protein S3
gi|148571328|gb|ABQ93387.1| SSU ribosomal protein S3P [Psychrobacter sp. PRwf-1]
Length = 247
Score = 264 bits (674), Expect = 7e-69, Method: Composition-based stats.
Identities = 110/222 (49%), Positives = 153/222 (68%), Gaps = 1/222 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI RLGV N+ W+A +Y L DL++R+YL+ L A ++ I+IER
Sbjct: 1 MGQKVHPIGIRLGVVKKHNANWYADPKQYSEYLLNDLQVRDYLRKKLDNAMISHIMIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I + +ARPG++IGKKG DIEK++K+L+ M +++ E+ P+++A L+A+ I
Sbjct: 61 TGAAKITISTARPGIVIGKKGEDIEKLQKELTKMMGVPAQVNIEEITSPDLDARLVAEGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ++MR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNSMRSGAQGIKVELSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST-IPAAEHR 221
IDY + AET YG+ G+KV+V + + DS P E +
Sbjct: 181 DIDYASVRAETTYGTIGVKVWVFRGEILDGMDSVYNPPKEDK 222
>gi|54778756|gb|AAV39590.1| ribosomal protein S3 [synthetic construct]
Length = 260
Score = 264 bits (674), Expect = 7e-69, Method: Composition-based stats.
Identities = 112/229 (48%), Positives = 156/229 (68%), Gaps = 4/229 (1%)
Query: 2 GQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTH 61
GQK++P RLG+ WNS WFA E+ L D K+R+YL L +A V++I+IER
Sbjct: 26 GQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPA 85
Query: 62 KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIA 121
K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI
Sbjct: 86 KSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSIT 145
Query: 122 QQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH 181
QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 146 SQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD 205
Query: 182 IDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + + PAA+ + ++
Sbjct: 206 IDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRK 254
>gi|120402322|ref|YP_952151.1| 30S ribosomal protein S3 [Mycobacterium vanbaalenii PYR-1]
gi|152060884|sp|A1T4P5|RS3_MYCVP RecName: Full=30S ribosomal protein S3
gi|119955140|gb|ABM12145.1| SSU ribosomal protein S3P [Mycobacterium vanbaalenii PYR-1]
Length = 280
Score = 264 bits (674), Expect = 8e-69, Method: Composition-based stats.
Identities = 102/216 (47%), Positives = 144/216 (66%), Gaps = 2/216 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG+ W SRW+A +Y + ED+ IR+ L L++AG+A + IERT
Sbjct: 1 MGQKINPHGFRLGITTEWKSRWYAD-KQYADYIKEDVAIRKLLATGLERAGIADVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++GT+ ++IR L +T ++ L++ EV PE A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTKKQVQLNILEVKNPESVAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR
Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
A IDYG A+T +G G+KV++ D V
Sbjct: 180 ADIDYGLYEAKTTFGRIGVKVWIYKGDIVGGKRELT 215
>gi|291482494|dbj|BAI83569.1| 30S ribosomal protein S3 [Bacillus subtilis subsp. natto BEST195]
Length = 218
Score = 264 bits (674), Expect = 8e-69, Method: Composition-based stats.
Identities = 99/209 (47%), Positives = 147/209 (70%), Gaps = 1/209 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ R+GV W S+W+A G +Y LHEDLKIREY+ L A V+K+ IER
Sbjct: 1 MGQKVNPVGLRIGVIRDWESKWYA-GKDYADFLHEDLKIREYISKRLSDASVSKVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK G+++E +RK L+++T +H+++ E+ + +++A L+A +I
Sbjct: 60 ANRVNITIHTAKPGMVIGKGGSEVEALRKALNSLTGKRVHINILEIKRADLDAQLVADNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRA K+ +Q MR GA GVK + SGRL GA+++R+E Y EG VPL TLRA
Sbjct: 120 ARQLENRVSFRRAQKQQIQRTMRAGAQGVKTMVSGRLGGADIARSEYYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVS 209
IDY T+ A+T YG G+KV++ + +
Sbjct: 180 DIDYATSEADTTYGKLGVKVWIYRGEVLP 208
>gi|148982468|ref|ZP_01816770.1| 30S ribosomal protein S3 [Vibrionales bacterium SWAT-3]
gi|145960459|gb|EDK25836.1| 30S ribosomal protein S3 [Vibrionales bacterium SWAT-3]
Length = 232
Score = 264 bits (674), Expect = 8e-69, Method: Composition-based stats.
Identities = 108/224 (48%), Positives = 154/224 (68%), Gaps = 1/224 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WN+ WFA ++ L D K+R++L L++A +++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNATWFANTKDFADNLDGDFKVRQFLTKELQKASLSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++ L+A SI
Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDGQLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
IDY T+ A T YG GIKV++ + E+ A E + +
Sbjct: 181 DIDYATSSAHTQYGVIGIKVWIF-KGEILGGMPAANAVEPKGDK 223
>gi|187930358|ref|YP_001900845.1| 30S ribosomal protein S3 [Ralstonia pickettii 12J]
gi|226697747|sp|B2UEL3|RS3_RALPJ RecName: Full=30S ribosomal protein S3
gi|187727248|gb|ACD28413.1| ribosomal protein S3 [Ralstonia pickettii 12J]
Length = 262
Score = 264 bits (674), Expect = 8e-69, Method: Composition-based stats.
Identities = 116/225 (51%), Positives = 162/225 (72%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V+ W SRW+A +++ +L ED+++RE+L+ LK A V +++IER
Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYASNTQFAGMLKEDIEVREFLKKKLKNASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI +YS+RPG++IGKKG DIE ++ +L +H+++ E+ KPE++A LIA SI
Sbjct: 61 AKNARITIYSSRPGVVIGKKGEDIELLKAELQRRMGVPVHVNIEEIRKPEVDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLERR++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDYG + AET YG G+KV+V D + +D+ + K
Sbjct: 181 DIDYGFSEAETTYGIIGVKVWVYKGDHLGRNDAPVVEEPQEERRK 225
>gi|119478126|ref|ZP_01618205.1| 30S ribosomal protein S3 [marine gamma proteobacterium HTCC2143]
gi|119448832|gb|EAW30075.1| 30S ribosomal protein S3 [marine gamma proteobacterium HTCC2143]
Length = 227
Score = 264 bits (674), Expect = 8e-69, Method: Composition-based stats.
Identities = 108/222 (48%), Positives = 153/222 (68%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI RLG+ S W+A G Y L DL++RE+L+ L A V++I+IER
Sbjct: 1 MGQKVHPIGIRLGITKQHTSIWYAEGGAYAEHLINDLEVREFLEKKLNSASVSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ RI +++ARPG+IIGKKG D++K+RK+LS +H+++ E+ KP+++A L+AQ++
Sbjct: 61 AQTARITIHTARPGIIIGKKGEDVDKLRKELSAKMGVPVHINIEEIRKPDLDAKLVAQNV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKR VQ+AMR GA G+KV SGR+ GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AGQLERRVMFRRAMKRVVQNAMRQGAQGIKVQVSGRVGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
IDY A T YG G+KV++ + + + A+ +
Sbjct: 181 DIDYSAYEAATTYGIIGVKVWIFKGEVIGGVEEVEVQAKGKK 222
>gi|261409515|ref|YP_003245756.1| 30S ribosomal protein S3 [Paenibacillus sp. Y412MC10]
gi|315649693|ref|ZP_07902777.1| ribosomal protein S3 [Paenibacillus vortex V453]
gi|329922023|ref|ZP_08277816.1| ribosomal protein S3 [Paenibacillus sp. HGF5]
gi|261285978|gb|ACX67949.1| ribosomal protein S3 [Paenibacillus sp. Y412MC10]
gi|315274881|gb|EFU38257.1| ribosomal protein S3 [Paenibacillus vortex V453]
gi|328942406|gb|EGG38670.1| ribosomal protein S3 [Paenibacillus sp. HGF5]
Length = 221
Score = 264 bits (674), Expect = 8e-69, Method: Composition-based stats.
Identities = 103/219 (47%), Positives = 154/219 (70%), Gaps = 2/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ R+G+ W S+W+A G ++G LL ED+KIREYL+ LK + V++I IER
Sbjct: 1 MGQKVNPVGLRIGIIRDWESKWYA-GKDFGDLLLEDVKIREYLKNKLKDSAVSRIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119
+ +++A+PG++IGK G+++E +R +++ + ++H++++E+ PE++A L+A+S
Sbjct: 60 ANRVNVTIHTAKPGMVIGKGGSEVEVLRGQVTKIAGGKKVHINISEIKNPELDAILVAES 119
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IAQQLERRV FRRA+K+A+Q MR GA G+K SGRL GAE++RTE Y EG VPL TLR
Sbjct: 120 IAQQLERRVSFRRALKQAIQRTMRSGAKGIKTSVSGRLGGAEIARTEGYSEGTVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
A IDYGTA A T YG G+KV++ + + +
Sbjct: 180 ADIDYGTAEAHTTYGRIGVKVWIYRGEVLPTAKKQAAQE 218
>gi|170729003|ref|YP_001763029.1| 30S ribosomal protein S3 [Shewanella woodyi ATCC 51908]
gi|169814350|gb|ACA88934.1| ribosomal protein S3 [Shewanella woodyi ATCC 51908]
Length = 229
Score = 264 bits (674), Expect = 9e-69, Method: Composition-based stats.
Identities = 109/226 (48%), Positives = 156/226 (69%), Gaps = 4/226 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ W S W+A S+Y L D ++R++L+ +LKQA V+KI+IER
Sbjct: 1 MGQKVHPNGIRLGITKPWISTWYADKSDYANNLTSDWEVRKFLEKNLKQASVSKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ +T +++ E+ KPE++A L+A+ I
Sbjct: 61 AKSVRVTIHTARPGVVIGKKGEDVEKLRNAVAKLTGIPAQINIAEIRKPELDAKLVAEGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRD----EVSDSDSTIPAAEHRV 222
IDY TA + T YG G+KV+V + + + + +
Sbjct: 181 DIDYSTAESHTQYGVIGVKVWVFKGEVLDGVLPAHEEPKQQPKRKP 226
>gi|254468886|ref|ZP_05082292.1| ribosomal protein S3 [beta proteobacterium KB13]
gi|207087696|gb|EDZ64979.1| ribosomal protein S3 [beta proteobacterium KB13]
Length = 282
Score = 264 bits (674), Expect = 9e-69, Method: Composition-based stats.
Identities = 122/226 (53%), Positives = 159/226 (70%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI FRLGV W+S+WF + L+ D+K+RE+L L A V+KI+IER
Sbjct: 1 MGQKINPIGFRLGVQKNWSSKWFTSTKNFPVFLNNDIKVREFLNKKLANAAVSKIIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN ++ + +ARPG++IGKKG DIE +R L + + L++ EV KPEI+ATLIAQSI
Sbjct: 61 AKNAKVTIMTARPGIVIGKKGEDIENLRSDLQGLMGIPVQLNIEEVRKPEIDATLIAQSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+RV FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++R+E Y EGRVPL TLRA
Sbjct: 121 AQQLEKRVQFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDYG A A+T YG GIKV++ + D P + V +K
Sbjct: 181 DIDYGVARAQTQYGIIGIKVWIYKGEVFQDDKVASPITKDVVGDKS 226
>gi|297582456|ref|YP_003698236.1| 30S ribosomal protein S3 [Bacillus selenitireducens MLS10]
gi|297140913|gb|ADH97670.1| ribosomal protein S3 [Bacillus selenitireducens MLS10]
Length = 219
Score = 264 bits (674), Expect = 9e-69, Method: Composition-based stats.
Identities = 101/211 (47%), Positives = 152/211 (72%), Gaps = 1/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP R+GV W S+W+A G +Y LLHED++IRE+L+ L +A V+ I IER
Sbjct: 1 MGQKINPNGLRVGVIKGWESKWYA-GKDYADLLHEDIRIREFLENRLTEASVSTIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G+++E +RK L++MT +H+++NE+ +P++++ L+A++I
Sbjct: 60 ANRVNVTIFTAKPGMVIGKGGSEVEALRKALNDMTGKRVHININEIKRPDLDSKLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRAMK+ +Q MR GA G++ SGRL GA+++R+E Y EG VPL TLRA
Sbjct: 120 ARQLENRISFRRAMKQTIQRTMRSGAKGIRTQVSGRLGGADIARSESYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYGTA A+T YG GIKV++ + +
Sbjct: 180 DIDYGTAEADTTYGKLGIKVWIYKGEVLPTK 210
>gi|253577185|ref|ZP_04854505.1| 30S ribosomal protein S3 [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251843429|gb|EES71457.1| 30S ribosomal protein S3 [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 222
Score = 264 bits (674), Expect = 9e-69, Method: Composition-based stats.
Identities = 103/220 (46%), Positives = 156/220 (70%), Gaps = 2/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ R+G+ W S+W+A G ++G LL ED+KIRE+L+ LK + V++I IER
Sbjct: 1 MGQKVNPVGLRVGIIRDWESKWYA-GKDFGDLLLEDVKIREHLKNKLKDSAVSRIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119
+ +++A+PG++IGK G+++E +R +++ + ++H++++E+ P+++A L+A+S
Sbjct: 60 ANRVNVTIHTAKPGMVIGKGGSEVENLRGEITKIAGGKKVHINISEIKHPDLDAILVAES 119
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IAQQLERRV FRRA+K+A+Q MR GA G+K SGRL GAE++RTE Y EG VPL TLR
Sbjct: 120 IAQQLERRVSFRRALKQAIQRTMRSGAKGIKTAVSGRLGGAEIARTEGYSEGTVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
A IDYGTA A T YG G+KV++ + + + A E
Sbjct: 180 ADIDYGTAEAHTTYGRIGVKVWIYRGEVLPTAKKQQAAQE 219
>gi|326388203|ref|ZP_08209806.1| 30S ribosomal protein S3 [Novosphingobium nitrogenifigens DSM
19370]
gi|326207369|gb|EGD58183.1| 30S ribosomal protein S3 [Novosphingobium nitrogenifigens DSM
19370]
Length = 231
Score = 263 bits (673), Expect = 9e-69, Method: Composition-based stats.
Identities = 124/218 (56%), Positives = 156/218 (71%), Gaps = 1/218 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K NPI RL +N TW+SRWFA G Y LL EDL IR+Y+ L QA ++K++IER
Sbjct: 1 MGHKTNPIGLRLQINRTWDSRWFAEGRSYAQLLKEDLTIRKYIVEKLPQAAISKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K CR+ +Y+ARPG+IIGKKG DIEK+R KLS +T S++ L++ E+ KPEI+A L+AQ I
Sbjct: 61 AKVCRVSIYAARPGVIIGKKGADIEKLRAKLSTLTASDVKLNIVEIRKPEIDAKLVAQGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL RRV FRRAMKRAVQSA+R GA+G+K+ GRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 ADQLVRRVAFRRAMKRAVQSALRLGAEGIKITCGGRLGGAEIARVEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
+IDY A A TAYG GIK ++ + E+ D
Sbjct: 181 NIDYAEAEAHTAYGVIGIKTWIF-KGEILGHDPLAQDR 217
>gi|292669853|ref|ZP_06603279.1| 30S ribosomal protein S3 [Selenomonas noxia ATCC 43541]
gi|292648650|gb|EFF66622.1| 30S ribosomal protein S3 [Selenomonas noxia ATCC 43541]
Length = 223
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 101/222 (45%), Positives = 154/222 (69%), Gaps = 1/222 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP RLG+ W++RW+A ++ LHED+KIR+YL+ L+ AGV ++ ER+
Sbjct: 1 MGQKVNPHGIRLGIVKDWDARWYAD-KDFAQNLHEDIKIRDYLKKSLQTAGVPRVETERS 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ +++A+PG++IG+ G+ IE+I++ L N+T+ + +++ E+ +P+++ATL+A++I
Sbjct: 60 KNRLKLTIHTAKPGMVIGRGGSGIEQIKEGLKNLTDKRVDINIAEIKQPDLDATLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR+ FRRAMK+AV MR GA G+K+ SGRL GAE++R E Y EG +PL TLRA
Sbjct: 120 AAQLERRIAFRRAMKQAVGRTMRLGAKGIKIAVSGRLGGAEIARRESYREGSIPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
IDYGTA A T YG GIKV++ + + D + R
Sbjct: 180 DIDYGTAEAHTTYGRIGIKVWIFKGEVLHDKKQQSRNGKERS 221
>gi|309782840|ref|ZP_07677560.1| ribosomal protein S3 [Ralstonia sp. 5_7_47FAA]
gi|308918264|gb|EFP63941.1| ribosomal protein S3 [Ralstonia sp. 5_7_47FAA]
Length = 262
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 116/225 (51%), Positives = 162/225 (72%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V+ W SRW+A +++ +L ED+++RE+L+ LK A V +++IER
Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYASNTQFAGMLKEDIEVREFLKKKLKNASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI +YS+RPG++IGKKG DIE ++ +L +H+++ E+ KPE++A LIA SI
Sbjct: 61 AKNARITIYSSRPGVVIGKKGEDIELLKAELQRRMGVPVHVNIEEIRKPEVDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLERR++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDYG + AET YG G+KV+V D + +D+ + K
Sbjct: 181 DIDYGFSEAETTYGIIGVKVWVYKGDHLGRNDAPVVEEPQEERRK 225
>gi|207721892|ref|YP_002252330.1| 30s ribosomal protein s3 [Ralstonia solanacearum MolK2]
gi|300702786|ref|YP_003744387.1| 30S ribosomal protein S3 [Ralstonia solanacearum CFBP2957]
gi|206587060|emb|CAQ17644.1| 30s ribosomal protein s3 [Ralstonia solanacearum MolK2]
gi|299070448|emb|CBJ41743.1| 30S ribosomal subunit protein S3 [Ralstonia solanacearum CFBP2957]
Length = 264
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 116/225 (51%), Positives = 162/225 (72%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V+ W SRW+A +++ +L ED+++RE+L+ LK A V +++IER
Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYASNTQFAGMLKEDIEVREFLKKKLKNASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI +YS+RPG++IGKKG DIE ++ +L +H+++ E+ KPE++A LIA SI
Sbjct: 61 AKNARITIYSSRPGVVIGKKGEDIELLKAELQRRMGVPVHVNIEEIRKPEVDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLERR++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDYG + AET YG G+KV+V D + +D+ + K
Sbjct: 181 DIDYGFSEAETTYGIIGVKVWVYKGDHLGRNDAPVVEEPQEERRK 225
>gi|241664526|ref|YP_002982886.1| 30S ribosomal protein S3 [Ralstonia pickettii 12D]
gi|240866553|gb|ACS64214.1| ribosomal protein S3 [Ralstonia pickettii 12D]
Length = 264
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 116/225 (51%), Positives = 162/225 (72%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V+ W SRW+A +++ +L ED+++RE+L+ LK A V +++IER
Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYASNTQFAGMLKEDIEVREFLKKKLKNASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI +YS+RPG++IGKKG DIE ++ +L +H+++ E+ KPE++A LIA SI
Sbjct: 61 AKNARITIYSSRPGVVIGKKGEDIELLKAELQRRMGVPVHVNIEEIRKPEVDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLERR++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDYG + AET YG G+KV+V D + +D+ + K
Sbjct: 181 DIDYGFSEAETTYGIIGVKVWVYKGDHLGRNDAPVVEEPQEERRK 225
>gi|17547732|ref|NP_521134.1| 30S ribosomal protein S3 [Ralstonia solanacearum GMI1000]
gi|27734516|sp|Q8XV18|RS3_RALSO RecName: Full=30S ribosomal protein S3
gi|17430037|emb|CAD16722.1| probable 30s ribosomal protein s3 [Ralstonia solanacearum GMI1000]
Length = 264
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 116/225 (51%), Positives = 162/225 (72%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V+ W SRW+A +++ +L ED+++RE+L+ LK A V +++IER
Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYASNTQFAGMLKEDIEVREFLKKKLKNASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI +YS+RPG++IGKKG DIE ++ +L +H+++ E+ KPE++A LIA SI
Sbjct: 61 AKNARITIYSSRPGVVIGKKGEDIELLKAELQRRMGVPVHVNIEEIRKPEVDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLERR++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDYG + AET YG G+KV+V D + +D+ + K
Sbjct: 181 DIDYGFSEAETTYGIIGVKVWVYKGDHLGRNDAPVVEEPQEERRK 225
>gi|160932195|ref|ZP_02079586.1| hypothetical protein CLOLEP_01030 [Clostridium leptum DSM 753]
gi|156868797|gb|EDO62169.1| hypothetical protein CLOLEP_01030 [Clostridium leptum DSM 753]
Length = 223
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 106/225 (47%), Positives = 150/225 (66%), Gaps = 2/225 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+SRWFA+ ++G L ED +R++L+ L AGV KI IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWFAKDKDFGDTLVEDYNLRKHLKKKLYGAGVPKIEIERD 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
RI ++ A+PG++IGK G +IEK+R + + N + +++ EV P++NA L+A++I
Sbjct: 61 ASKVRIHIHCAKPGMVIGKGGAEIEKLRLECEKILNKPVAINIVEVKSPDLNAQLVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+R+ FRRAMK+A+ AMRFGA G+K GRL GAE++RTE Y EG +PLQT+RA
Sbjct: 121 AQQLEKRISFRRAMKQAIGRAMRFGAKGIKTQVGGRLGGAEIARTEQYHEGTIPLQTIRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDYG A A T YG G+KV++ + + ++ P A K
Sbjct: 181 DIDYGFAEAATTYGRIGVKVWLYRGEVL--QNAGRPRARREGGNK 223
>gi|111220552|ref|YP_711346.1| 30S ribosomal protein S3 [Frankia alni ACN14a]
gi|122954579|sp|Q0RRR5|RS3_FRAAA RecName: Full=30S ribosomal protein S3
gi|111148084|emb|CAJ59752.1| 30S ribosomal protein S3 [Frankia alni ACN14a]
Length = 350
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 99/218 (45%), Positives = 149/218 (68%), Gaps = 1/218 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FRLG+ + SRW+A +Y A + ED+KIR+ + +++AG++++ IERT
Sbjct: 1 MGQKVNPHGFRLGITSEFTSRWYAD-KQYKAYVGEDVKIRKMMSRGMERAGISRVDIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PE++A L+AQ +
Sbjct: 60 QGRLRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPEVDAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++A+Q+AM+ GA G++V SGRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLSSRVSFRRAMRKAMQTAMKGGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
IDYG A T +G G+KV++ D V
Sbjct: 180 DIDYGFYEARTNFGRIGVKVWIYKGDIVQSRAEREAQE 217
>gi|325123598|gb|ADY83121.1| 30S ribosomal protein S3 [Acinetobacter calcoaceticus PHEA-2]
Length = 265
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 112/228 (49%), Positives = 159/228 (69%), Gaps = 2/228 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI RLGV N+ W+A +Y L +DL++RE+L LK A V+ ILIER
Sbjct: 1 MGQKVHPIGIRLGVVKRHNANWYANPKQYAEYLLKDLQVREFLTKKLKNAMVSNILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ + +ARPG++IGKKG DIEK++++L+++ +S+NE+ +P+++A L+A++I
Sbjct: 61 SGAAKVTISTARPGIVIGKKGEDIEKLQRELTSIMGVPAQVSINEIDRPDLDARLVAEAI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV+FRRAMKRAVQ+ MR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 ASQLEKRVMFRRAMKRAVQNTMRAGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-SDSTIPA-AEHRVVEKD 226
IDY T AET YG+ G+KV++ + + PA AE R ++
Sbjct: 181 DIDYATMRAETTYGTIGVKVWIFRGEILGGMKQVMNPAPAEDRPAKRG 228
>gi|59710849|ref|YP_203625.1| 30S ribosomal protein S3 [Vibrio fischeri ES114]
gi|197334087|ref|YP_002155002.1| ribosomal protein S3 [Vibrio fischeri MJ11]
gi|75507109|sp|Q5E8A9|RS3_VIBF1 RecName: Full=30S ribosomal protein S3
gi|226697774|sp|B5FG15|RS3_VIBFM RecName: Full=30S ribosomal protein S3
gi|59478950|gb|AAW84737.1| 30S ribosomal subunit protein S3 [Vibrio fischeri ES114]
gi|197315577|gb|ACH65024.1| ribosomal protein S3 [Vibrio fischeri MJ11]
Length = 232
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 111/224 (49%), Positives = 154/224 (68%), Gaps = 1/224 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WN+ WFA E+ L D K+R+YL LK+A +++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNATWFASSQEFADNLDGDFKVRQYLTKELKKASLSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++ L+A SI
Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRAGVAKIAGVPAQINIAEVRKPELDGQLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
IDY T+ A T YG G+KV++ + EV A E + +
Sbjct: 181 DIDYATSSAHTQYGVIGVKVWIF-KGEVLGGMPAANAVEPKADK 223
>gi|159039828|ref|YP_001539081.1| ribosomal protein S3 [Salinispora arenicola CNS-205]
gi|189045330|sp|A8M523|RS3_SALAI RecName: Full=30S ribosomal protein S3
gi|157918663|gb|ABW00091.1| ribosomal protein S3 [Salinispora arenicola CNS-205]
Length = 288
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 104/227 (45%), Positives = 151/227 (66%), Gaps = 2/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG++ W SRWFA Y + ED+KIR + L++AG++K+ IERT
Sbjct: 1 MGQKVHPHGFRLGISTDWKSRWFAD-KLYKDYIGEDVKIRRMMSKGLERAGISKVDIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG+KG + ++IR KL +T ++ L++ EV PE +A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRKGAEADRIRGKLEKLTGKQVQLNIIEVKSPESDAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFG-ADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAM+ G++V SGRL GAE+SRTE Y EGRVPL TLR
Sbjct: 120 AEQLSSRVSFRRAMRKAMQSAMKNPVCKGIRVQVSGRLGGAEMSRTEFYREGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
A+I+YG A T +G G+KV++ D V ++ A E+
Sbjct: 180 ANIEYGFFEARTTFGRIGVKVWIYKGDAVPGRETPAEAPSRPRRERG 226
>gi|2113872|emb|CAA73678.1| rpsC [Mycobacterium bovis BCG]
Length = 274
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 101/215 (46%), Positives = 143/215 (66%), Gaps = 2/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG+ W SRW+A +Y + ED+ IR L L++AG+A + IERT
Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYAEYVKEDVAIRRLLSSGLERAGIADVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++GT+ ++IR L +T ++ L++ EV PE A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTGKQVQLNILEVKNPESQAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAM + G++V SGRL GAE++R+E Y EGRVPL TLR
Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMNRSEFYREGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
A IDYG A+T +G G+KV++ D V
Sbjct: 180 ADIDYGLYEAKTTFGRIGVKVWIYKGDIVGGKREL 214
>gi|332038831|gb|EGI75273.1| 30S ribosomal protein S3 [Pseudoalteromonas haloplanktis ANT/505]
Length = 233
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 105/210 (50%), Positives = 150/210 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG++ W S W+A ++ A L D K+R +L LK A V+KI+IER
Sbjct: 1 MGQKVHPTGIRLGISKPWVSTWYASSKDFSAQLFGDHKVRTFLTKELKTASVSKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R+ ++ + ++++EV KPE++A L+A I
Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRQAVTKIAGVPAQINISEVRKPELDAQLVADGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKR+VQ+AMR G+ G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRSVQNAMRIGSKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210
IDY T+ A T YG G+KV++ + +
Sbjct: 181 DIDYATSEALTTYGIIGVKVWIFKGEVIGG 210
>gi|256380592|ref|YP_003104252.1| ribosomal protein S3 [Actinosynnema mirum DSM 43827]
gi|255924895|gb|ACU40406.1| ribosomal protein S3 [Actinosynnema mirum DSM 43827]
Length = 275
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 102/231 (44%), Positives = 150/231 (64%), Gaps = 6/231 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG+ W SRW+A +Y + ED+KIR+ L +++AG++K+ IERT
Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYAEYVAEDVKIRKLLSRGMERAGISKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV PE +A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTKKQVQLNILEVKNPESDAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGA-DGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAMR G++V GRL GAE+SR+E Y +GRVPL TLR
Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRSSQVKGIRVQCGGRLGGAEMSRSEHYRDGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226
A IDYG A T +G G+KV++ D V + + R +D
Sbjct: 180 ADIDYGFFEARTTFGRIGVKVWIYKGDVVGGISAKRERDAAPSAERAPRRD 230
>gi|296168563|ref|ZP_06850367.1| 30S ribosomal protein S3 [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295896626|gb|EFG76265.1| 30S ribosomal protein S3 [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 279
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 102/215 (47%), Positives = 143/215 (66%), Gaps = 2/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG+ W SRW+A +Y + ED+ IR L L++AG+A + IERT
Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYADYVKEDVAIRRLLSTGLERAGIADVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++GT+ ++IR L +T ++ L++ EV PE A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTGKQVQLNILEVRNPESQAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR
Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
A IDYG A+T +G G+KV++ D V
Sbjct: 180 ADIDYGLYEAKTTFGRIGVKVWIYKGDIVGGKREL 214
>gi|152973962|ref|YP_001373479.1| 30S ribosomal protein S3 [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|189044950|sp|A7GK26|RS3_BACCN RecName: Full=30S ribosomal protein S3
gi|152022714|gb|ABS20484.1| ribosomal protein S3 [Bacillus cytotoxicus NVH 391-98]
Length = 219
Score = 263 bits (673), Expect = 1e-68, Method: Composition-based stats.
Identities = 103/220 (46%), Positives = 147/220 (66%), Gaps = 1/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ R+GV W SRWFA +Y LLHED+KIREY+ LK + V+K+ IER
Sbjct: 1 MGQKVNPVGLRVGVIRDWESRWFAE-KDYATLLHEDIKIREYITARLKDSSVSKVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK GT++E +RK L+ +T +H+++ EV K +++A L+A++I
Sbjct: 60 ANRVNVTIHTAKPGMVIGKGGTEVEALRKALNQLTGKRVHINILEVKKADLDAKLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRA K+ +Q AMR GA G+K SGRL GA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLENRVSFRRAQKQVIQRAMRAGAKGIKTQVSGRLGGADIARAESYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
IDY TA A+T YG G+KV++ + +
Sbjct: 180 DIDYATAEADTTYGKLGVKVWIYRGEVLPSKKKASEEGGK 219
>gi|294142927|ref|YP_003558905.1| 30S ribosomal protein S3 [Shewanella violacea DSS12]
gi|293329396|dbj|BAJ04127.1| ribosomal protein S3 [Shewanella violacea DSS12]
Length = 229
Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats.
Identities = 110/226 (48%), Positives = 154/226 (68%), Gaps = 4/226 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ W S W+A S+Y L+ D ++R++L+ LKQA V+KI+IER
Sbjct: 1 MGQKVHPNGIRLGITKPWISTWYADKSDYANNLNSDWEVRKFLEKKLKQASVSKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ +T +++ E+ KPE++A L+A I
Sbjct: 61 AKSVRVTIHTARPGVVIGKKGEDVEKLRNAVAKLTGIPAQINIAEIRKPELDAKLVADGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQSAMR GA G+KV SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQSAMRLGAKGIKVQVSGRLGGAEIARYEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE----VSDSDSTIPAAEHRV 222
IDY TA + T YG G+KV++ + V + + +
Sbjct: 181 DIDYSTAESHTQYGVIGVKVWIFKGEVLDGIVPAHEEPKQQPKRKP 226
>gi|145225619|ref|YP_001136297.1| 30S ribosomal protein S3 [Mycobacterium gilvum PYR-GCK]
gi|315445972|ref|YP_004078851.1| 30S ribosomal protein S3P [Mycobacterium sp. Spyr1]
gi|189045020|sp|A4TEB8|RS3_MYCGI RecName: Full=30S ribosomal protein S3
gi|145218105|gb|ABP47509.1| SSU ribosomal protein S3P [Mycobacterium gilvum PYR-GCK]
gi|315264275|gb|ADU01017.1| SSU ribosomal protein S3P [Mycobacterium sp. Spyr1]
Length = 278
Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats.
Identities = 102/215 (47%), Positives = 144/215 (66%), Gaps = 2/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG+ W SRW+A +Y + ED+ IR+ L L++AG+A + IERT
Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYADYIKEDVAIRKLLATGLERAGIADVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++GT+ ++IR L +T ++ L++ EV PE A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTKKQVQLNILEVKNPESRAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR
Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
A IDYG A+T +G G+KV++ D V
Sbjct: 180 ADIDYGLYEAKTTFGRIGVKVWIYKGDIVGGKREL 214
>gi|289669350|ref|ZP_06490425.1| 30S ribosomal protein S3 [Xanthomonas campestris pv. musacearum
NCPPB4381]
Length = 244
Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats.
Identities = 116/208 (55%), Positives = 155/208 (74%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K++P RLG++ WNS+W+A ++ A L DLK+RE L+ L QAGV+KILIER
Sbjct: 1 MGHKVHPTGIRLGISKDWNSKWYANKGDFAAYLAADLKVREMLRKKLAQAGVSKILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ +++ARPG++IGK+G DIEK+RK++S + H++V EV KPE++A L+A+SI
Sbjct: 61 AKTARVTIHTARPGVVIGKRGEDIEKLRKEVSELMGVPAHINVTEVRKPELDAQLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERR++FRRAMKR+V +AMR GA G+KV +GRLNGAE++R+E Y EGRVPL TLRA
Sbjct: 121 AQQLERRIMFRRAMKRSVGNAMRLGALGIKVNVAGRLNGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
IDYG A A T YG GIKV + +
Sbjct: 181 DIDYGFAEASTTYGIIGIKVLIYKGEVF 208
>gi|304438901|ref|ZP_07398824.1| 30S ribosomal protein S3 [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304372567|gb|EFM26150.1| 30S ribosomal protein S3 [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 252
Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats.
Identities = 96/224 (42%), Positives = 148/224 (66%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+G+ W+S+W+A ++ LL ED KIREY++ L AG+AK+ IER
Sbjct: 1 MGQKVNPHGLRVGIIKDWDSKWYANKKDFSDLLIEDNKIREYIKTKLYAAGIAKVEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ + + +PG++IG+ G +E++R +L +T + ++V E+ +++A L+A+SI
Sbjct: 61 ANRVKVSISTGKPGMVIGRGGVGVEELRAELEKLTGKSVVVNVEEIKNLDMDAVLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+ LERR+ FRRAMK+A+Q MR GA G+K SGRL GA+++RTE Y EG +PLQTLRA
Sbjct: 121 AEALERRISFRRAMKQAIQRTMRAGAKGIKTAVSGRLGGADMARTEGYSEGTIPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
IDYG A A+T YG G+KV++ + + + + P +
Sbjct: 181 DIDYGFAEADTTYGKLGVKVWLYKGEVLPQARNGQPRERDNRKK 224
>gi|220935486|ref|YP_002514385.1| ribosomal protein S3 [Thioalkalivibrio sp. HL-EbGR7]
gi|219996796|gb|ACL73398.1| ribosomal protein S3 [Thioalkalivibrio sp. HL-EbGR7]
Length = 228
Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats.
Identities = 114/226 (50%), Positives = 157/226 (69%), Gaps = 3/226 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLGV+ WNS W+A G +Y +L +DL+IRE+L+ L QA V++I I R
Sbjct: 1 MGQKVHPVGFRLGVSSEWNSTWYADGRDYANVLAKDLEIREFLKERLSQASVSRIEIARP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117
+ I +++ARPG++IGKKG DIE +RK+ + + + +++ E+ KPE++A L+A
Sbjct: 61 ARQAFITIHTARPGIVIGKKGEDIEALRKEAAAKLGLDVNSVKINIEEIRKPEVDAQLVA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ IAQQLERR++FRRAMKRAV +AMR GA GVKV +GRLNGAE++R+E Y EGRVPL T
Sbjct: 121 EGIAQQLERRIMFRRAMKRAVGNAMRLGALGVKVHVAGRLNGAEIARSEWYREGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223
LRA IDYG A A T YG G+KV+V + T E +
Sbjct: 181 LRADIDYGFAEARTTYGVIGVKVWVFKGEVFDFEQKTDGGQEGKAA 226
>gi|296268556|ref|YP_003651188.1| 30S ribosomal protein S3 [Thermobispora bispora DSM 43833]
gi|296091343|gb|ADG87295.1| ribosomal protein S3 [Thermobispora bispora DSM 43833]
Length = 278
Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats.
Identities = 96/207 (46%), Positives = 145/207 (70%), Gaps = 1/207 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG+ + SRW+A Y + ED+ IR LQ +++AG++++ IERT
Sbjct: 1 MGQKVHPHGFRLGITTDFKSRWYAE-KLYKDYVAEDVAIRRMLQKGMERAGISRVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ +++ARPG++IG++G + ++IR L +T ++ L++ EV PEI+A L+AQ +
Sbjct: 60 TDRVQVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPEIDAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++A+Q+AM+ GA G+++ SGRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLSSRVSFRRAMRKAMQTAMKSGAKGIRIQCSGRLGGAEMSRSEFYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207
IDYG A T +G G+KV++ D
Sbjct: 180 DIDYGFYEARTTFGRIGVKVWIYKGDV 206
>gi|300690166|ref|YP_003751161.1| 30S ribosomal subunit protein S3 [Ralstonia solanacearum PSI07]
gi|299077226|emb|CBJ49852.1| 30S ribosomal subunit protein S3 [Ralstonia solanacearum PSI07]
Length = 264
Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats.
Identities = 115/225 (51%), Positives = 162/225 (72%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V+ W SRW+A +++ +L ED+++RE+L+ LK A V +++IER
Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYASNTQFAGMLKEDIEVREFLKKKLKNASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI +YS+RPG++IGKKG DIE ++ +L +H+++ E+ KPE++A LIA SI
Sbjct: 61 AKNARITIYSSRPGVVIGKKGEDIELLKAELQRRMGVPVHVNIEEIRKPEVDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLERR++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDYG + AET YG G+KV+V D + +++ + K
Sbjct: 181 DIDYGFSEAETTYGIIGVKVWVYKGDHLGRNEAPVVEEPQEERRK 225
>gi|326390655|ref|ZP_08212210.1| ribosomal protein S3 [Thermoanaerobacter ethanolicus JW 200]
gi|325993333|gb|EGD51770.1| ribosomal protein S3 [Thermoanaerobacter ethanolicus JW 200]
Length = 221
Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats.
Identities = 101/218 (46%), Positives = 151/218 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+GV W ++W+A ++ LL ED+KIR Y++ L AG+ KI+IER
Sbjct: 1 MGQKVHPYGLRVGVTQDWLAKWYADDKDFSKLLIEDIKIRNYIKEKLYSAGIPKIVIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I +++A+PG++IGK G I+K+R++L MTN + L++ EV PE++A L+A++I
Sbjct: 61 SNRIKIDIHAAKPGMVIGKGGAGIDKLREELEKMTNKTVILNIVEVKTPELSAQLVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A Q+E+R+ +RRAMK+A+ AM+ GA G+K+ SGRL GAE++RTE Y EG VPLQTLRA
Sbjct: 121 AAQIEKRISYRRAMKQAIARAMKLGAKGIKIACSGRLAGAEIARTERYHEGVVPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
IDYG A A T YG G+KV+++ + + + A
Sbjct: 181 DIDYGFAEANTTYGKIGVKVWINKGEILPQPKKQVTAE 218
>gi|254294434|ref|YP_003060457.1| ribosomal protein S3 [Hirschia baltica ATCC 49814]
gi|254042965|gb|ACT59760.1| ribosomal protein S3 [Hirschia baltica ATCC 49814]
Length = 253
Score = 263 bits (672), Expect = 1e-68, Method: Composition-based stats.
Identities = 127/239 (53%), Positives = 169/239 (70%), Gaps = 19/239 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--------------- 45
MGQK+NPI RLGVN T +SRW+A ++G LLHEDL++R+Y+Q
Sbjct: 1 MGQKVNPIGLRLGVNRTADSRWYADSVDFGRLLHEDLRLRKYIQEWRPKDDNSGKRTGEV 60
Query: 46 HLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNE 105
++AG++KI+IER HK CRI V+++RPG++IGKKG DIEK+RK LS E+ +++ E
Sbjct: 61 LARRAGISKIIIERPHKKCRITVHTSRPGMVIGKKGADIEKLRKDLSKFVTDEVFVNLVE 120
Query: 106 VPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRT 165
V KPEI+A L+A+ +A+QLERRV FRRAMKR +QSAMR GA+G+++ +GRL GAE++RT
Sbjct: 121 VRKPEIDAKLVAEDVARQLERRVSFRRAMKRTIQSAMRLGAEGIRLNVAGRLGGAEIART 180
Query: 166 ECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
E Y EGRVPL TLRA IDYG A A T YG GIKV++ + E+ + D P A R E
Sbjct: 181 EWYREGRVPLHTLRADIDYGVAEAMTTYGIIGIKVWIF-KGEIMEHD---PMARDRKAE 235
>gi|153840303|ref|ZP_01992970.1| ribosomal protein S3 [Vibrio parahaemolyticus AQ3810]
gi|149746038|gb|EDM57168.1| ribosomal protein S3 [Vibrio parahaemolyticus AQ3810]
Length = 240
Score = 263 bits (672), Expect = 2e-68, Method: Composition-based stats.
Identities = 108/222 (48%), Positives = 152/222 (68%), Gaps = 1/222 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WN+ WFA ++ L D K+R++L LK+A +++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNATWFANTKDFADNLDGDFKVRQFLTSELKKASLSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+ SI
Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDAQLVGDSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
IDY T+ A T YG GIK ++ + E+ A E +
Sbjct: 181 DIDYATSSAHTQYGVIGIKTWIF-KGEILGGMPAANAVELKA 221
>gi|297545323|ref|YP_003677625.1| ribosomal protein S3 [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
gi|296843098|gb|ADH61614.1| ribosomal protein S3 [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
Length = 221
Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 100/218 (45%), Positives = 150/218 (68%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+GV W ++W+A + L ED+KIR Y++ L AG++KI+IER
Sbjct: 1 MGQKVHPYGLRVGVTQDWLAKWYADDKNFSKFLIEDIKIRNYIKEKLYAAGISKIVIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I +++A+PG++IGK G I+K+R++L MTN I L++ EV PE++A L+A+++
Sbjct: 61 SNRIKIDIHAAKPGMVIGKGGAGIDKLREELEKMTNKTIILNIVEVKTPELSAQLVAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A Q+E+R+ +RRAMK+A+ AM+ GA G+K+ SGRL GAE++RTE Y EG VPLQTLRA
Sbjct: 121 AAQIEKRISYRRAMKQAIARAMKLGAKGIKIACSGRLAGAEIARTERYHEGVVPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
IDYG A A T YG G+KV+++ + + + A
Sbjct: 181 DIDYGFAEANTTYGKIGVKVWINKGEILPQPKKQVTAE 218
>gi|227499189|ref|ZP_03929324.1| 30S ribosomal protein S3P [Acidaminococcus sp. D21]
gi|226904636|gb|EEH90554.1| 30S ribosomal protein S3P [Acidaminococcus sp. D21]
Length = 227
Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 104/227 (45%), Positives = 159/227 (70%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FR+GV W+S+WFA +Y L ED+KIRE+++ QAG++++ IERT
Sbjct: 1 MGQKVNPHGFRVGVIDDWDSKWFAD-KDYQKYLLEDIKIREFIKDKQFQAGISRVAIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ RI +Y+A+PG++IG++G++IE ++K L+ +T+S++ +++ EV P+++ATL+A+++
Sbjct: 60 EQKMRISIYTAKPGIVIGRQGSNIELLKKDLAKLTDSKLDINIIEVKSPDMDATLVAENV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR+ FRRAMK+ V MR GA G+K+ SGRL GAE++RTE Y +G +PL TLRA
Sbjct: 120 AGQLERRIAFRRAMKQCVGRTMRLGAKGIKITCSGRLGGAEIARTESYRDGSIPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
+IDYGTA A T YG GIKV++ + + + E +
Sbjct: 180 NIDYGTAEAHTTYGRIGIKVWIYKGEVLPTVKAAAKKEAPEGQEGGA 226
>gi|312795780|ref|YP_004028702.1| SSU ribosomal protein S3P [Burkholderia rhizoxinica HKI 454]
gi|312167555|emb|CBW74558.1| SSU ribosomal protein S3P [Burkholderia rhizoxinica HKI 454]
Length = 267
Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 118/227 (51%), Positives = 166/227 (73%), Gaps = 2/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V+ W SRW+A +++ +L ED+ +REYL+ LK A V++++IER
Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNTQFAGMLKEDIGVREYLKKKLKNASVSRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN R+ ++S+RPG++IGKKG DIE ++ +L +H+++ EV KPE +A LIA SI
Sbjct: 61 AKNARLTIFSSRPGVVIGKKGEDIELLKTELQRRMGVPVHVNIEEVRKPETDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLERR++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDY T+ A+T YG G+KV+V D + +D +P AE V +K +
Sbjct: 181 DIDYATSEAKTTYGIIGVKVWVYKGDTLGRND--MPVAEEPVEDKRA 225
>gi|71891981|ref|YP_277711.1| 30S ribosomal protein S3 [Candidatus Blochmannia pennsylvanicus
str. BPEN]
gi|91207640|sp|Q493K2|RS3_BLOPB RecName: Full=30S ribosomal protein S3
gi|71796087|gb|AAZ40838.1| 30S ribosomal subunit protein S3 [Candidatus Blochmannia
pennsylvanicus str. BPEN]
Length = 236
Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 115/210 (54%), Positives = 151/210 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ TW+S W+A ++ L D K+R +L L +A V++I+IER
Sbjct: 1 MGQKVHPNGVRLGITKTWHSTWYANNKDFSDNLGNDFKVRHFLMQKLSKALVSRIIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ VY+ARPGLIIGKKG DIEK+RK ++ ++ L++ EV KPE++A L+A +I
Sbjct: 61 AKSIRVTVYTARPGLIIGKKGEDIEKLRKNIARISGVPTQLNIAEVRKPELDAKLLADNI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRVVFRRAMKR VQ+AMR GA G+KV SGRL+GAE++RTE Y EGRVPL TLRA
Sbjct: 121 ASQLERRVVFRRAMKRVVQNAMRLGAKGIKVEVSGRLSGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210
IDY + A T YG GIKV+V + + D
Sbjct: 181 DIDYSLSEARTTYGIIGIKVWVFKGEILGD 210
>gi|94312242|ref|YP_585452.1| 30S ribosomal protein S3 [Cupriavidus metallidurans CH34]
gi|123081148|sp|Q1LI43|RS3_RALME RecName: Full=30S ribosomal protein S3
gi|93356094|gb|ABF10183.1| 30S ribosomal subunit protein S3 [Cupriavidus metallidurans CH34]
Length = 265
Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 114/221 (51%), Positives = 160/221 (72%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V+ W SRW+A +++ +L ED+++RE+L+ LK A V +++IER
Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNTKFAGMLKEDIEVREFLKKKLKNASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+N RI +YS+RPG++IGKKG DIE ++ +L +H+++ E+ KPE +A LIA SI
Sbjct: 61 ARNARITIYSSRPGVVIGKKGEDIELLKAELQRRMGVPVHVNIEEIRKPETDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLERR++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
IDYG + AET YG G+KV+V D + +D+ +
Sbjct: 181 DIDYGFSEAETTYGIIGVKVWVYKGDHLGRNDAPVVEEPQE 221
>gi|307543831|ref|YP_003896310.1| 30S ribosomal protein S3 [Halomonas elongata DSM 2581]
gi|307215855|emb|CBV41125.1| 30S ribosomal protein S3 [Halomonas elongata DSM 2581]
Length = 232
Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 111/220 (50%), Positives = 153/220 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP RLG+ S W+A Y L+ DL++R +L+ LK A V+ I+IER
Sbjct: 1 MGQKVNPTGIRLGIVKDHTSVWYAERGAYADKLNNDLEVRSFLEERLKNASVSNIIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
N RI +++ARPG++IGKKG D++K+R+ LS M +H+++ EV KPE++A L+AQ+I
Sbjct: 61 ANNARITIHTARPGIVIGKKGEDVDKLRRDLSQMMGVPVHVNIEEVRKPELDAKLVAQNI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKR+VQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AGQLERRVMFRRAMKRSVQNAMRLGAGGIKVQLSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
ID+ T A+T YG G+KV++ + + + A+
Sbjct: 181 DIDFATYEAKTTYGIIGVKVWIFKGEILGGIEEVRAKAKQ 220
>gi|149192563|ref|ZP_01870730.1| 30S ribosomal protein S3 [Vibrio shilonii AK1]
gi|148833604|gb|EDL50674.1| 30S ribosomal protein S3 [Vibrio shilonii AK1]
Length = 232
Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 109/224 (48%), Positives = 153/224 (68%), Gaps = 1/224 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WN+ WFA E+ L D K+R++L L +A +++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNATWFANTKEFADNLDGDFKVRQFLTKELAKASLSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++ L+A SI
Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRTAVAKIAGVPAQINIAEVRKPELDGQLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
IDY T+ A T YG GIKV++ + E+ A E + +
Sbjct: 181 DIDYATSSAHTQYGVIGIKVWIF-KGEILGGMPAANAVEPKGDK 223
>gi|296333119|ref|ZP_06875573.1| 30S ribosomal protein S3 [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305672821|ref|YP_003864492.1| 30S ribosomal protein S3 [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296149735|gb|EFG90630.1| 30S ribosomal protein S3 [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305411064|gb|ADM36182.1| 30S ribosomal protein S3 [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 218
Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 100/219 (45%), Positives = 149/219 (68%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ R+GV W S+W+A G +Y LHEDLKIREY+ L A V+K+ IER
Sbjct: 1 MGQKVNPVGLRIGVIRDWESKWYA-GKDYADFLHEDLKIREYISKRLSDASVSKVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK G+++E +RK L+++T +H+++ E+ + +++A L+A +I
Sbjct: 60 ANRVNITIHTAKPGMVIGKGGSEVESLRKALNSLTGKRVHINILEIKRADLDAQLVADNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRA K+ +Q MR GA GVK + SGRL GA+++R+E Y EG VPL TLRA
Sbjct: 120 ARQLENRVSFRRAQKQQIQRTMRAGAQGVKTMVSGRLGGADIARSEYYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDY T+ A+T YG G+KV++ + + T +
Sbjct: 180 DIDYATSEADTTYGKLGVKVWIYRGEVLPTKKKTEEGGK 218
>gi|56480312|ref|NP_709102.2| 30S ribosomal protein S3 [Shigella flexneri 2a str. 301]
gi|27734495|sp|P59184|RS3_SHIFL RecName: Full=30S ribosomal protein S3
gi|56383863|gb|AAN44809.2| 30S ribosomal subunit protein S3 [Shigella flexneri 2a str. 301]
Length = 233
Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 112/230 (48%), Positives = 156/230 (67%), Gaps = 4/230 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++ RLG+ WNS WFA E+ L D K+R+YL L +A V++I+IER
Sbjct: 1 MGQKVHRNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 TSQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + + PAA+ + ++
Sbjct: 181 DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRK 230
>gi|312127232|ref|YP_003992106.1| 30S ribosomal protein S3 [Caldicellulosiruptor hydrothermalis 108]
gi|312793933|ref|YP_004026856.1| 30S ribosomal protein S3 [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312877371|ref|ZP_07737336.1| ribosomal protein S3 [Caldicellulosiruptor lactoaceticus 6A]
gi|311777251|gb|ADQ06737.1| ribosomal protein S3 [Caldicellulosiruptor hydrothermalis 108]
gi|311795845|gb|EFR12209.1| ribosomal protein S3 [Caldicellulosiruptor lactoaceticus 6A]
gi|312181073|gb|ADQ41243.1| ribosomal protein S3 [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 222
Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 99/222 (44%), Positives = 150/222 (67%), Gaps = 1/222 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG+ W+SRWFA ++ + ED KIR +++ L AG+++I IER
Sbjct: 1 MGQKVHPKGFRLGIIRDWDSRWFANDKDFQKYVLEDYKIRRHIKEKLYHAGISRIEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119
K ++I+++A+PG++IG+ G+ +E +RK+L +T I L + E+ PE++A L+A++
Sbjct: 61 AKRVKVIIHTAKPGIVIGRAGSGVEALRKELEKLTGGKTISLDIKEIKVPELDAQLVAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA QLE+RV FR+AMK+A+ A+R GA G+K + SGRL GA+++RTE Y EGR+PLQTLR
Sbjct: 121 IAAQLEKRVSFRKAMKQAMARALRSGAKGIKTMVSGRLGGADIARTEWYKEGRIPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
A IDYG A A T YG G+K ++ D + + +
Sbjct: 181 ADIDYGFAEAHTTYGRIGVKTWIYKGDILPQKAAASEKGGDK 222
>gi|51244982|ref|YP_064866.1| 30S ribosomal protein S3 [Desulfotalea psychrophila LSv54]
gi|61215519|sp|Q6AP65|RS3_DESPS RecName: Full=30S ribosomal protein S3
gi|50876019|emb|CAG35859.1| probable 30S ribosomal protein S3 [Desulfotalea psychrophila LSv54]
Length = 217
Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 104/213 (48%), Positives = 149/213 (69%), Gaps = 1/213 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ RL + TW+S W+A +Y L ED KIR++L+ L AG++ + IERT
Sbjct: 1 MGQKVNPLGIRLNITRTWDSVWYAD-KDYSTFLIEDQKIRKFLKKRLSHAGLSSVKIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ RI +++ARPG++IGKKG +IE ++++L + + ++ L + EV +PE +A L+A +I
Sbjct: 60 GEQVRIKLFTARPGIVIGKKGAEIEILKRELEKLVSRKVTLDIQEVRRPEADAQLVADNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQL RRV FRRAMK+AV SA+RFG G+K+ SGRL GAE+SR E EGRVPL TLRA
Sbjct: 120 AQQLARRVAFRRAMKKAVSSALRFGVQGIKIACSGRLGGAEMSRCEWVREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
+DY + + T YG G+KV++ + +SD D
Sbjct: 180 DVDYALSESHTTYGIIGVKVWIFKGEVLSDKDK 212
>gi|146297279|ref|YP_001181050.1| ribosomal protein S3 [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|189044962|sp|A4XLS4|RS3_CALS8 RecName: Full=30S ribosomal protein S3
gi|145410855|gb|ABP67859.1| SSU ribosomal protein S3P [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 222
Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 100/222 (45%), Positives = 150/222 (67%), Gaps = 1/222 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG+ W+SRWFA ++ L ED KIR +++ L AG+++I IER
Sbjct: 1 MGQKVHPKGFRLGIIKDWDSRWFANDKDFEKYLLEDYKIRRHIKEKLYNAGISRIEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119
K ++I+++A+PG++IG+ G+ +E +RK+L +T I L + E+ PE++A L+A++
Sbjct: 61 AKRIKVIIHTAKPGIVIGRAGSGVEALRKELEKITGGKTISLDIKEIKVPELDAQLVAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA QLE+RV FR+AMK+A+ A+R GA G+K + SGRL GA+++RTE Y EGR+PLQTLR
Sbjct: 121 IAAQLEKRVSFRKAMKQAMARALRSGAKGIKTMVSGRLGGADIARTEWYKEGRIPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
A IDYG A A T YG G+K ++ D + + +
Sbjct: 181 ADIDYGFAEAHTTYGRIGVKTWIYKGDVLPQKGAAAEKGGDK 222
>gi|323340380|ref|ZP_08080637.1| 30S ribosomal protein S3 [Lactobacillus ruminis ATCC 25644]
gi|323092156|gb|EFZ34771.1| 30S ribosomal protein S3 [Lactobacillus ruminis ATCC 25644]
Length = 218
Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 99/219 (45%), Positives = 151/219 (68%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP R+G+ W+++W+A ++ + LHEDL IR+Y++ L A V+ + IER
Sbjct: 1 MGQKINPTGLRVGIIRDWDAKWYAE-KDFASNLHEDLHIRKYIEKKLADASVSTVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + +++A+PG++IGK G+++EK+RK+L+N+T +H+++ E+ KP+++A L+ +SI
Sbjct: 60 AKRVNVSIHTAKPGMVIGKGGSEVEKLRKELNNLTGKRVHINIVEIKKPDLDAKLVGESI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE RV FRRAMK+A+Q MR GA G+KV +GRLNGA++SR E + EG VPL TLRA
Sbjct: 120 AQQLENRVAFRRAMKQAIQRTMRAGAQGIKVQVAGRLNGADMSRVERFSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDY A T YG G+KV++ + + + +
Sbjct: 180 DIDYAWVEARTTYGQLGVKVWIYRGEVLPEKKDNSKGGK 218
>gi|218667516|ref|YP_002424836.1| ribosomal protein S3 [Acidithiobacillus ferrooxidans ATCC 23270]
gi|218519729|gb|ACK80315.1| ribosomal protein S3 [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 228
Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 111/221 (50%), Positives = 156/221 (70%), Gaps = 1/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ WNSRW+ S++ L ED+K+R++++ L V+ I+IER
Sbjct: 9 MGQKTNPIGLRLGIIKNWNSRWY-GKSDFQEKLLEDIKVRQFIRERLAGGAVSDIIIERP 67
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ RI V++ARPG++IGKKG DIEK+R + +H++V E+ KPE++A L+A+S+
Sbjct: 68 ARSARITVHTARPGIVIGKKGEDIEKLRHDVQKRMGVPVHINVEEIRKPELDAQLVAESV 127
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQL RR++FRRAMKRAV +AMRFGA G+++ +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 128 AQQLVRRIMFRRAMKRAVTNAMRFGALGMRINCAGRLGGAEIARTEWYREGRVPLHTLRA 187
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
IDYG A A T YG G+KV++ + + S + AA +
Sbjct: 188 DIDYGFAEANTTYGIIGVKVWIFKGEILEWSTAQTAAARQK 228
>gi|213158829|ref|YP_002320827.1| ribosomal protein S3 [Acinetobacter baumannii AB0057]
gi|226697655|sp|B7IA33|RS3_ACIB5 RecName: Full=30S ribosomal protein S3
gi|213057989|gb|ACJ42891.1| ribosomal protein S3 [Acinetobacter baumannii AB0057]
Length = 250
Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 111/226 (49%), Positives = 156/226 (69%), Gaps = 1/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI RLGV N+ W+A +Y L +DL++RE+L +LK A V+ ILIER
Sbjct: 1 MGQKVHPIGIRLGVVKRHNANWYANPKQYAEYLLKDLQVREFLTKNLKNAMVSNILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ + +ARPG++IGKKG DIEK++++L+N+ +S+NE+ +P+++A L+A++I
Sbjct: 61 SGAAKVTISTARPGIVIGKKGEDIEKLQRELTNIMGVPAQVSINEIDRPDLDARLVAEAI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV+FRRAMKRAVQ+ MR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 ASQLEKRVMFRRAMKRAVQNTMRAGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-SDSTIPAAEHRVVEK 225
IDY T AET YG+ G+KV++ + + PA K
Sbjct: 181 DIDYATMRAETTYGTIGVKVWIFRGEILGGMKQVMNPAPAEERPAK 226
>gi|83748155|ref|ZP_00945182.1| SSU ribosomal protein S3P [Ralstonia solanacearum UW551]
gi|207723101|ref|YP_002253506.1| 30s ribosomal protein s3 [Ralstonia solanacearum IPO1609]
gi|83725123|gb|EAP72274.1| SSU ribosomal protein S3P [Ralstonia solanacearum UW551]
gi|206588294|emb|CAQ18992.1| 30s ribosomal protein s3 [Ralstonia solanacearum IPO1609]
Length = 264
Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 116/225 (51%), Positives = 162/225 (72%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V+ W SRW+A +++ +L ED+++RE+L+ LK A V +++IER
Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYASNTQFAGMLKEDIEVREFLKKKLKNASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI +YS+RPG++IGKKG DIE ++ +L +H+++ E+ KPE++A LIA SI
Sbjct: 61 AKNARITIYSSRPGVVIGKKGEDIELLKVELQRRMGVPVHVNIEEIRKPEVDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLERR++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDYG + AET YG G+KV+V D + +D+ + K
Sbjct: 181 DIDYGFSEAETTYGIIGVKVWVYKGDHLGRNDAPVVEEPQEERRK 225
>gi|269217129|ref|ZP_06160983.1| ribosomal protein S3 [Slackia exigua ATCC 700122]
gi|269129266|gb|EEZ60351.1| ribosomal protein S3 [Slackia exigua ATCC 700122]
Length = 237
Score = 263 bits (671), Expect = 2e-68, Method: Composition-based stats.
Identities = 109/219 (49%), Positives = 150/219 (68%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+ P FRLG+ W SRW+A +Y L DL IR +L+ L +A V+KI IER
Sbjct: 1 MGQKVMPTGFRLGITEDWRSRWYAD-KDYAKTLENDLAIRRFLEKKLARAAVSKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+IIV +ARPG++IGKKG +I+ +RK+++ + ++++ V EV +PE++ATL+A+SI
Sbjct: 60 GDKTKIIVTTARPGVVIGKKGAEIDALRKEVAKVATGQVNIEVIEVKRPELDATLVARSI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRAM++AVQSA + GA G+++ SGRL GAE+SR E Y EGRVPL TLRA
Sbjct: 120 AEQLEGRVAFRRAMRKAVQSARKSGALGIRIQCSGRLGGAEMSRREWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDYG A T GS G+KV++ + + PA E
Sbjct: 180 KIDYGFTTASTTMGSIGVKVWIYHGEMLPGGKVPQPALE 218
>gi|73542857|ref|YP_297377.1| 30S ribosomal protein S3 [Ralstonia eutropha JMP134]
gi|91207835|sp|Q46WF0|RS3_RALEJ RecName: Full=30S ribosomal protein S3
gi|72120270|gb|AAZ62533.1| SSU ribosomal protein S3P [Ralstonia eutropha JMP134]
Length = 264
Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats.
Identities = 113/220 (51%), Positives = 160/220 (72%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V+ W SRW+A +++ +L ED+++R++L+ LK A V +++IER
Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNTKFAGMLKEDIEVRDFLKKKLKNASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+N RI +YS+RPG++IGKKG DIE ++ +L +H+++ E+ KPE +A LIA SI
Sbjct: 61 ARNARITIYSSRPGVVIGKKGEDIELLKAELQRRMGVPVHVNIEEIRKPETDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLERR++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
IDYG + AET YG G+KV+V D + +D+ +
Sbjct: 181 DIDYGFSEAETTYGIIGVKVWVYKGDHLGRNDAPVVEEPQ 220
>gi|307267008|ref|ZP_07548524.1| ribosomal protein S3 [Thermoanaerobacter wiegelii Rt8.B1]
gi|306917993|gb|EFN48251.1| ribosomal protein S3 [Thermoanaerobacter wiegelii Rt8.B1]
Length = 221
Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats.
Identities = 101/218 (46%), Positives = 151/218 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+GV W ++W+A ++ LL ED+KIR Y++ L AG+ KI+IER
Sbjct: 1 MGQKVHPYGLRVGVTQDWLAKWYANDKDFSKLLIEDIKIRNYIKEKLYSAGIPKIVIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I +++A+PG++IGK G I+K+R++L MTN + L++ EV PE++A L+A++I
Sbjct: 61 SNRIKIDIHAAKPGMVIGKGGAGIDKLREELEKMTNKTVILNIVEVKTPELSAQLVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A Q+E+R+ +RRAMK+A+ AM+ GA G+K+ SGRL GAE++RTE Y EG VPLQTLRA
Sbjct: 121 AAQIEKRISYRRAMKQAIARAMKLGAKGIKIACSGRLAGAEIARTERYHEGVVPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
IDYG A A T YG G+KV+++ + + + A
Sbjct: 181 DIDYGFAEANTTYGKIGVKVWINKGEILPQPKKQVTAE 218
>gi|89100343|ref|ZP_01173208.1| 30S ribosomal protein S3 [Bacillus sp. NRRL B-14911]
gi|89084964|gb|EAR64100.1| 30S ribosomal protein S3 [Bacillus sp. NRRL B-14911]
Length = 218
Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats.
Identities = 103/219 (47%), Positives = 152/219 (69%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ R+GV W S+WFA G +Y LLHEDLK+REY+ L A ++K+ IER
Sbjct: 1 MGQKVNPVGLRIGVIRDWESKWFA-GKDYAELLHEDLKVREYITKRLSDASLSKVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK G+++E +RK L+++T +H+++ E+ K +I+A L+A++I
Sbjct: 60 ANRLNITIHTAKPGMVIGKGGSEVEALRKALNSLTGKRVHINILEIKKADIDAKLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRA K+ +Q AMR GA G+K + SGRL GA+++R+E Y EG VPL TLRA
Sbjct: 120 ARQLENRVSFRRAQKQVIQRAMRAGAKGIKTMVSGRLGGADIARSESYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDY TA A+T YG G+KV++ + + T +
Sbjct: 180 DIDYATAEADTTYGKLGVKVWIYRGEVLPTKKKTEEGGK 218
>gi|119947120|ref|YP_944800.1| ribosomal protein S3 [Psychromonas ingrahamii 37]
gi|152060897|sp|A1T0D6|RS3_PSYIN RecName: Full=30S ribosomal protein S3
gi|119865724|gb|ABM05201.1| SSU ribosomal protein S3P [Psychromonas ingrahamii 37]
Length = 230
Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats.
Identities = 107/228 (46%), Positives = 153/228 (67%), Gaps = 4/228 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ ++S W+A ++ A L D +IR++L LK A ++KI IER
Sbjct: 1 MGQKVHPNGIRLGITKAFSSTWYAGKKDFAANLFSDFEIRKFLTEKLKNASLSKITIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ M ++++EV KPE++A L+A SI
Sbjct: 61 AKSVRVTIHTARPGVVIGKKGEDVEKLRTAIAKMAGVPAQINISEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
+ QLERRV+FRRAMKRAVQ+AMR GA G+KV GRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 SSQLERRVMFRRAMKRAVQNAMRLGAKGIKVQVGGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD----SDSTIPAAEHRVVE 224
IDY T+ A T YG G+KV++ + + + P+ R
Sbjct: 181 DIDYSTSEAHTVYGIIGVKVWIFKGEVLGGLPLQVEEQQPSKPKRKSR 228
>gi|198282643|ref|YP_002218964.1| 30S ribosomal protein S3 [Acidithiobacillus ferrooxidans ATCC
53993]
gi|198247164|gb|ACH82757.1| ribosomal protein S3 [Acidithiobacillus ferrooxidans ATCC 53993]
Length = 220
Score = 262 bits (670), Expect = 2e-68, Method: Composition-based stats.
Identities = 111/221 (50%), Positives = 156/221 (70%), Gaps = 1/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ WNSRW+ S++ L ED+K+R++++ L V+ I+IER
Sbjct: 1 MGQKTNPIGLRLGIIKNWNSRWY-GKSDFQEKLLEDIKVRQFIRERLAGGAVSDIIIERP 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ RI V++ARPG++IGKKG DIEK+R + +H++V E+ KPE++A L+A+S+
Sbjct: 60 ARSARITVHTARPGIVIGKKGEDIEKLRHDVQKRMGVPVHINVEEIRKPELDAQLVAESV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQL RR++FRRAMKRAV +AMRFGA G+++ +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 120 AQQLVRRIMFRRAMKRAVTNAMRFGALGMRINCAGRLGGAEIARTEWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
IDYG A A T YG G+KV++ + + S + AA +
Sbjct: 180 DIDYGFAEANTTYGIIGVKVWIFKGEILEWSTAQTAAARQK 220
>gi|222529724|ref|YP_002573606.1| 30S ribosomal protein S3 [Caldicellulosiruptor bescii DSM 6725]
gi|254764510|sp|B9MKH5|RS3_ANATD RecName: Full=30S ribosomal protein S3
gi|222456571|gb|ACM60833.1| ribosomal protein S3 [Caldicellulosiruptor bescii DSM 6725]
Length = 222
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 99/222 (44%), Positives = 150/222 (67%), Gaps = 1/222 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG+ W+SRWFA ++ + ED KIR +++ L AG+++I IER
Sbjct: 1 MGQKVHPKGFRLGIIRDWDSRWFANDKDFEKYVLEDYKIRRHIKEKLYNAGISRIEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119
K ++I+++A+PG++IG+ G+ +E +RK+L +T I L + E+ PE++A L+A++
Sbjct: 61 AKRVKVIIHTAKPGIVIGRAGSGVEALRKELEKLTGGKTISLDIKEIKVPELDAQLVAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA QLE+RV FR+AMK+A+ A+R GA G+K + SGRL GA+++RTE Y EGR+PLQTLR
Sbjct: 121 IAAQLEKRVSFRKAMKQAMARALRSGAKGIKTMVSGRLGGADIARTEWYKEGRIPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
A IDYG A A T YG G+K ++ D + + +
Sbjct: 181 ADIDYGFAEAHTTYGRIGVKTWIYKGDILPQKAAASEKGGDK 222
>gi|153867894|ref|ZP_01998088.1| 30S ribosomal protein S3 [Beggiatoa sp. SS]
gi|152144786|gb|EDN71912.1| 30S ribosomal protein S3 [Beggiatoa sp. SS]
Length = 218
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 108/209 (51%), Positives = 154/209 (73%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+ P FRLG+ W+S+W+A +Y L+ DLK+ E+++ L QA ++++ IER
Sbjct: 7 MGQKVPPTGFRLGIIKDWSSKWYASSKDYANYLNTDLKVPEFIKKKLAQASLSEVRIERP 66
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+N RII+++ARPG++IGKKG DI+K+R +++ M +H+SV E+ KPE++A L+A S+
Sbjct: 67 ARNARIIIHTARPGIVIGKKGEDIDKLRTQVTEMMGIPVHISVEEIRKPEVDAHLVAVSV 126
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERR++FRRAMKR V +AMR GA G+++ SGRLNGAE++R E Y EGRVPL TLRA
Sbjct: 127 AQQLERRIMFRRAMKRVVGNAMRLGAQGIRINVSGRLNGAEIARKEWYREGRVPLHTLRA 186
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVS 209
IDYG A A T YG G+KV++ + +
Sbjct: 187 DIDYGFAEAHTTYGVIGVKVWIFKGEIIG 215
>gi|95931437|ref|ZP_01314143.1| ribosomal protein S3 [Desulfuromonas acetoxidans DSM 684]
gi|95132505|gb|EAT14198.1| ribosomal protein S3 [Desulfuromonas acetoxidans DSM 684]
Length = 211
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 112/212 (52%), Positives = 157/212 (74%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLGV TW S+W+A +Y +HEDLK+R YL+ L AG++KI IER
Sbjct: 1 MGQKVHPVGFRLGVIRTWESKWYAD-EDYARFVHEDLKLRNYLKKRLYHAGISKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ +Y+ARPG+IIGK+G+++E ++++L+ +T+ EI L++ EV KPE+NA L+A+ +
Sbjct: 60 AGKMKLNIYAARPGIIIGKRGSEVEALKQELAKLTDKEIFLNIQEVRKPEMNAQLVAEGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV FRRAMKR+V ++RFGA G+K+ SGRL GAE+SRTE Y EGRVPL T+RA
Sbjct: 120 ALQLERRVAFRRAMKRSVGQSLRFGAQGIKITCSGRLGGAEMSRTEWYREGRVPLHTIRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
IDYG A A+T YG G+KV + + +S
Sbjct: 180 DIDYGFAEAKTTYGIIGVKVLIFKGEVLSREQ 211
>gi|312140912|ref|YP_004008248.1| 30S ribosomal protein s3 rpsc [Rhodococcus equi 103S]
gi|325675450|ref|ZP_08155134.1| 30S ribosomal protein S3 [Rhodococcus equi ATCC 33707]
gi|311890251|emb|CBH49569.1| 30S ribosomal protein S3 RpsC [Rhodococcus equi 103S]
gi|325553421|gb|EGD23099.1| 30S ribosomal protein S3 [Rhodococcus equi ATCC 33707]
Length = 265
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 102/220 (46%), Positives = 146/220 (66%), Gaps = 2/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG+ W SRW+A +Y + ED+ IR+ L +++AG+AK+ IERT
Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYAEYVKEDVAIRKLLATGMERAGIAKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV E A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRAELEKLTGKQVQLNILEVKNAEAEAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR
Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
A IDYG A+T +G G+KV++ D V AA
Sbjct: 180 ADIDYGLYEAKTTFGRIGVKVWIYKGDIVGGKRELSAAAP 219
>gi|238021596|ref|ZP_04602022.1| hypothetical protein GCWU000324_01496 [Kingella oralis ATCC 51147]
gi|237866210|gb|EEP67252.1| hypothetical protein GCWU000324_01496 [Kingella oralis ATCC 51147]
Length = 232
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 110/226 (48%), Positives = 160/226 (70%), Gaps = 2/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P+ FRL VN W+S+WFA+ +++ +L +D+ +REYL L A V +I+IER
Sbjct: 1 MGQKIHPVGFRLAVNKDWSSKWFAKSTDFATVLKQDIDVREYLSKRLANASVGRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ RI ++SARPG++IG+KG DIE +++ L + +H+++ E+ +PE++A +IA I
Sbjct: 61 AKSARITIHSARPGVVIGQKGADIEILKQDLEKLLGVAVHVNIEEIRRPELDAQIIADGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+RV FRRAMKRA+Q+AMR GA G+K++ SGRLNGA+++R+E Y EGRVPL TLRA
Sbjct: 121 AQQLEKRVQFRRAMKRAMQNAMRAGAKGIKIMTSGRLNGADIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
+DY T+ A T YG G+KV+V + P E+R +
Sbjct: 181 DVDYATSEALTTYGIIGLKVWVYKGE--MGQVQAQPERENRRSNRK 224
>gi|209693930|ref|YP_002261858.1| 30S ribosomal protein S3 [Aliivibrio salmonicida LFI1238]
gi|226697660|sp|B6EPT1|RS3_ALISL RecName: Full=30S ribosomal protein S3
gi|208007881|emb|CAQ78011.1| 30S ribosomal subunit protein S3 [Aliivibrio salmonicida LFI1238]
Length = 232
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 112/224 (50%), Positives = 154/224 (68%), Gaps = 1/224 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WN+ WFA E+ L D K+R+YL LK+A +++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNATWFASSQEFADNLDGDFKVRQYLTKELKKASLSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRAGVAKIAGVPAQINIAEVRKPELDAHLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV GRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAQGIKVQVGGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
IDY TA A T YG G+KV++ + EV A E + +
Sbjct: 181 DIDYATASAHTQYGVIGVKVWIF-KGEVLGGMPAANAVEPKADK 223
>gi|163752600|ref|ZP_02159779.1| ribosomal protein S3 [Shewanella benthica KT99]
gi|161327512|gb|EDP98719.1| ribosomal protein S3 [Shewanella benthica KT99]
Length = 229
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 110/226 (48%), Positives = 153/226 (67%), Gaps = 4/226 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ W S W+A S+Y L+ D ++R+YL+ LKQA V+KI+IER
Sbjct: 1 MGQKVHPNGIRLGITKPWISTWYADKSDYAKNLNSDWEVRKYLEKKLKQASVSKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ +T +++ E+ KPE++A L+A I
Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRNAVAKLTGIPAQINIAEIRKPELDAKLVADGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R E Y EGRVPL T RA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVQVSGRLGGAEIARYEWYREGRVPLHTFRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRD----EVSDSDSTIPAAEHRV 222
IDY TA + T YG G+KV+V + V + + +
Sbjct: 181 DIDYSTAESHTQYGVIGVKVWVFKGEVLDGVVPAHEEPKQQPKRKP 226
>gi|302871504|ref|YP_003840140.1| ribosomal protein S3 [Caldicellulosiruptor obsidiansis OB47]
gi|302574363|gb|ADL42154.1| ribosomal protein S3 [Caldicellulosiruptor obsidiansis OB47]
Length = 222
Score = 262 bits (670), Expect = 3e-68, Method: Composition-based stats.
Identities = 99/222 (44%), Positives = 150/222 (67%), Gaps = 1/222 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG+ W+SRWFA ++ + ED KIR +++ L AG+++I IER
Sbjct: 1 MGQKVHPKGFRLGIIRDWDSRWFANDKDFDKYVLEDYKIRRHIKEKLYNAGISRIEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119
K ++I+++A+PG++IG+ G+ +E +RK+L +T I L + E+ PE++A L+A++
Sbjct: 61 AKRVKVIIHTAKPGIVIGRAGSGVEALRKELEKLTGGKTISLDIKEIKVPELDAQLVAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA QLE+RV FR+AMK+A+ A+R GA G+K + SGRL GA+++RTE Y EGR+PLQTLR
Sbjct: 121 IAAQLEKRVSFRKAMKQAMARALRSGAKGIKTMVSGRLGGADIARTEWYKEGRIPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
A IDYG A A T YG G+K ++ D + + +
Sbjct: 181 ADIDYGFAEAHTTYGRIGVKTWIYKGDILPQKVAASEKGGDK 222
>gi|78044912|ref|YP_361112.1| 30S ribosomal protein S3 [Carboxydothermus hydrogenoformans Z-2901]
gi|91207645|sp|Q3A9S2|RS3_CARHZ RecName: Full=30S ribosomal protein S3
gi|77997027|gb|ABB15926.1| ribosomal protein S3 [Carboxydothermus hydrogenoformans Z-2901]
Length = 222
Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats.
Identities = 102/219 (46%), Positives = 156/219 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+G+ W+++WFA Y LLHEDLKIR+Y++ QAG+++I+IER
Sbjct: 1 MGQKVHPKGLRIGIIKDWDAKWFADKKHYQELLHEDLKIRKYIKTKFYQAGISRIVIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ +++ARPG++IGK GT+IE +RK+L MT +I++++ E+ PEI+A L+A++I
Sbjct: 61 SNRVKVTIHTARPGMVIGKGGTEIEVLRKELEKMTGKQININIAEIKVPEIDAQLVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A Q+E+R+ ++RAMK+AV A++ GA G+KV SGRL GAE++R+E Y EG+VPL TLRA
Sbjct: 121 AAQIEKRISYKRAMKQAVSRALKMGAQGIKVACSGRLAGAEIARSEWYSEGKVPLTTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDYG A A T YG G+KV++ + + + + E
Sbjct: 181 DIDYGFAEALTTYGKIGVKVWIYKGEVLPEVKKESVSTE 219
>gi|167036807|ref|YP_001664385.1| 30S ribosomal protein S3 [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|167039526|ref|YP_001662511.1| 30S ribosomal protein S3 [Thermoanaerobacter sp. X514]
gi|256752638|ref|ZP_05493490.1| ribosomal protein S3 [Thermoanaerobacter ethanolicus CCSD1]
gi|300915223|ref|ZP_07132538.1| ribosomal protein S3 [Thermoanaerobacter sp. X561]
gi|307725147|ref|YP_003904898.1| 30S ribosomal protein S3 [Thermoanaerobacter sp. X513]
gi|320115229|ref|YP_004185388.1| 30S ribosomal protein S3 [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|166853766|gb|ABY92175.1| ribosomal protein S3 [Thermoanaerobacter sp. X514]
gi|166855641|gb|ABY94049.1| ribosomal protein S3 [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|256748458|gb|EEU61510.1| ribosomal protein S3 [Thermoanaerobacter ethanolicus CCSD1]
gi|300888947|gb|EFK84094.1| ribosomal protein S3 [Thermoanaerobacter sp. X561]
gi|307582208|gb|ADN55607.1| ribosomal protein S3 [Thermoanaerobacter sp. X513]
gi|319928320|gb|ADV79005.1| ribosomal protein S3 [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 221
Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats.
Identities = 101/218 (46%), Positives = 151/218 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+GV W ++W+A ++ LL ED+KIR Y++ L AG+ KI+IER
Sbjct: 1 MGQKVHPYGLRVGVTQDWLTKWYADDKDFSKLLIEDIKIRNYIKEKLYAAGIPKIVIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I +++A+PG++IGK G I+K+R++L MTN + L++ EV PE++A L+A++I
Sbjct: 61 SNRIKIDIHAAKPGMVIGKGGAGIDKLREELEKMTNKTVILNIVEVKTPELSAQLVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A Q+E+R+ +RRAMK+A+ AM+ GA G+K+ SGRL GAE++RTE Y EG VPLQTLRA
Sbjct: 121 AAQIEKRISYRRAMKQAIARAMKLGAKGIKIACSGRLAGAEIARTERYHEGVVPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
IDYG A A T YG G+KV+++ + + + A
Sbjct: 181 DIDYGFAEANTTYGKIGVKVWINKGEILPQPKKQVTAE 218
>gi|167626800|ref|YP_001677300.1| 30S ribosomal protein S3 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|241667381|ref|ZP_04754959.1| 30S ribosomal protein S3 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254875930|ref|ZP_05248640.1| 30S ribosomal protein S3 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|167596801|gb|ABZ86799.1| 30S ribosomal protein S3 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|254841951|gb|EET20365.1| 30S ribosomal protein S3 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 222
Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats.
Identities = 104/219 (47%), Positives = 154/219 (70%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP RLG+ NS W+A S+Y L+ED+K+RE+L L A V+KI IER
Sbjct: 1 MGQKVNPNGIRLGIVKEHNSTWYADSSDYATKLNEDIKVREFLHKKLASAAVSKIQIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+N +I +++ARPG++IGKKG D+EK+R ++ + + +++ EV KPEI+A L+A S+
Sbjct: 61 AQNAKITIHTARPGIVIGKKGEDVEKLRADVNKLMGVPVQINIEEVRKPEIDAKLVADSV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+RV+FRRAMK+A+Q+AM+ GA G+K++ SGRL GAE++R+E +GRVPLQT RA
Sbjct: 121 AQQLEKRVMFRRAMKKAMQAAMKSGAKGIKIMVSGRLGGAEIARSEWARDGRVPLQTFRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
+DY T+ A T YG G+KV++ + + + +
Sbjct: 181 DVDYATSKALTTYGIIGVKVWIYKGEVLPGQMNQKNNKK 219
>gi|54307547|ref|YP_128567.1| 30S ribosomal protein S3 [Photobacterium profundum SS9]
gi|61215569|sp|Q6LVB0|RS3_PHOPR RecName: Full=30S ribosomal protein S3
gi|46911967|emb|CAG18765.1| putative ribosomal protein S3 [Photobacterium profundum SS9]
Length = 229
Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats.
Identities = 108/227 (47%), Positives = 155/227 (68%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WN+ WFA E+ L D K+R++L LK+A +++++IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNTTWFANSQEFADNLDGDFKVRQFLIKELKKASLSRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R +S + ++++EV KPE++A L+ SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRAHISKIAGVPAQINISEVRKPELDAQLVGDSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV GRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVQVGGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDY T+ A T YG G+KV++ + + P A+ ++ S
Sbjct: 181 DIDYATSSAHTQYGVIGVKVWIFKGEVLGGMPIEEPKADKPKKQRKS 227
>gi|311070769|ref|YP_003975692.1| 30S ribosomal protein S3 [Bacillus atrophaeus 1942]
gi|310871286|gb|ADP34761.1| 30S ribosomal protein S3 [Bacillus atrophaeus 1942]
Length = 218
Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats.
Identities = 99/219 (45%), Positives = 149/219 (68%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ R+GV W S+W+A G +Y LHEDLKIREY+ L A V+K+ IER
Sbjct: 1 MGQKVNPVGLRIGVIRDWESKWYA-GKDYADFLHEDLKIREYISKRLSDASVSKVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK G+++E +RK L+++T +H+++ E+ + +++A L+A +I
Sbjct: 60 ANRVNITIHTAKPGMVIGKGGSEVEALRKALNSLTGKRVHINILEIKRADLDAQLVADNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRA K+ +Q MR GA GVK + SGRL GA+++R+E Y EG VPL TLRA
Sbjct: 120 ARQLENRISFRRAQKQQIQRTMRAGAQGVKTMVSGRLGGADIARSEYYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDY T+ A+T YG G+KV++ + + T +
Sbjct: 180 DIDYATSEADTTYGKLGVKVWIYRGEVLPTKKKTEEGGK 218
>gi|317131375|ref|YP_004090689.1| ribosomal protein S3 [Ethanoligenens harbinense YUAN-3]
gi|315469354|gb|ADU25958.1| ribosomal protein S3 [Ethanoligenens harbinense YUAN-3]
Length = 221
Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats.
Identities = 98/210 (46%), Positives = 145/210 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+SRWFA+ + +G LL ED +R YL+ L AG+ +I IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWFAKDNVFGDLLVEDYNLRNYLKKKLFSAGIPRIEIERD 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
RI ++ A+PG++IGK G +I+K+R +L + +++ EV P++NA L+A++I
Sbjct: 61 ASRVRIHIHCAKPGMVIGKGGVEIDKLRTELEARLGKPVSINIVEVRSPDVNAQLVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+R+ FRRAMK+++ AM+ GA G+KV +GRL GAE++R E Y EG +PLQTLRA
Sbjct: 121 AAQLEKRISFRRAMKQSIGRAMKLGAKGIKVTVAGRLGGAEIARVEHYHEGTIPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210
IDYG + A+T YG G+KV++ + + +
Sbjct: 181 DIDYGFSEAKTTYGRIGVKVWIYKGEVLPE 210
>gi|304315946|ref|YP_003851091.1| ribosomal protein S3 [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
gi|302777448|gb|ADL68007.1| ribosomal protein S3 [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 221
Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats.
Identities = 104/218 (47%), Positives = 156/218 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP R+GV+ W+++WFA+ ++ LL ED+KIR++++ + +GV KI IER
Sbjct: 1 MGQKINPRGLRVGVSQDWDAKWFAKDKDFSDLLIEDIKIRDFIKNKIYASGVPKIEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I VY+A+PG++IGK G IE++R+++ MTN ++ +++ EV PE++A L+A++I
Sbjct: 61 ANRIKIDVYTAKPGMVIGKGGAGIEELRQEIEKMTNKKVIINIVEVKNPELDAQLVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR+ FRRAMK+++ AM+ GA G+K+ SGRL GAE++RTE Y EG VPLQTLRA
Sbjct: 121 ASQLERRISFRRAMKQSISRAMKQGAKGIKIACSGRLAGAEIARTERYHEGVVPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
+IDYG A A T YG G+KV+++ + + + A
Sbjct: 181 NIDYGFAEANTTYGKIGVKVWINKGEILPQPKKQVTAE 218
>gi|307694146|ref|ZP_07636383.1| ribosomal protein S3 [Ruminococcaceae bacterium D16]
Length = 287
Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats.
Identities = 108/216 (50%), Positives = 146/216 (67%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+SRW+A+ G LL ED KIR+YL+ L AG+ KI IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWYAKNELVGDLLVEDKKIRDYLKKTLYSAGIPKIEIERD 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ RI ++ ARPG++IGK G +I+KI KL M + L + EV +++A L+A++I
Sbjct: 61 NAKVRIYLHCARPGVVIGKGGEEIKKIEAKLVKMIGKPVDLKIVEVKNADMDAQLVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+R+ FRRAMK A+ AMR GA G+K SGRL GAE++RTE Y +G +PLQTLRA
Sbjct: 121 AQQLEKRIGFRRAMKNAMGRAMRSGARGIKTCCSGRLGGAEIARTEHYHDGTIPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
IDYG A A T YG G+KV++ + ++ + T P
Sbjct: 181 DIDYGFAEAATTYGRIGVKVWIYKGEVLTQALRTTP 216
>gi|221307934|ref|ZP_03589781.1| 30S ribosomal protein S3 [Bacillus subtilis subsp. subtilis str.
168]
gi|221312255|ref|ZP_03594060.1| 30S ribosomal protein S3 [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221317189|ref|ZP_03598483.1| 30S ribosomal protein S3 [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221321452|ref|ZP_03602746.1| 30S ribosomal protein S3 [Bacillus subtilis subsp. subtilis str.
SMY]
gi|255767030|ref|NP_388003.2| 30S ribosomal protein S3 [Bacillus subtilis subsp. subtilis str.
168]
gi|321313793|ref|YP_004206080.1| 30S ribosomal protein S3 [Bacillus subtilis BSn5]
gi|239938933|sp|P21465|RS3_BACSU RecName: Full=30S ribosomal protein S3; Short=BS3; AltName:
Full=BS2
gi|1165309|gb|AAC45962.1| S3 [Bacillus subtilis]
gi|225184657|emb|CAB11898.2| ribosomal protein S3 (BS3) [Bacillus subtilis subsp. subtilis str.
168]
gi|320020067|gb|ADV95053.1| 30S ribosomal protein S3 [Bacillus subtilis BSn5]
Length = 218
Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats.
Identities = 99/219 (45%), Positives = 148/219 (67%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ R+GV W S+W+A G +Y LHEDLKIREY+ L A V+K+ IER
Sbjct: 1 MGQKVNPVGLRIGVIRDWESKWYA-GKDYADFLHEDLKIREYISKRLSDASVSKVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK G+++E +RK L+++T +H+++ E+ + +++A L+A +I
Sbjct: 60 ANRVNITIHTAKPGMVIGKGGSEVEALRKALNSLTGKRVHINILEIKRADLDAQLVADNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRA K+ +Q MR GA GVK + SGRL GA+++R+E Y EG VPL TLRA
Sbjct: 120 ARQLENRVSFRRAQKQQIQRTMRAGAQGVKTMVSGRLGGADIARSEYYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDY T+ A+T YG G+KV++ + + +
Sbjct: 180 DIDYATSEADTTYGKLGVKVWIYRGEVLPTKKKNEEGGK 218
>gi|56961938|ref|YP_173660.1| 30S ribosomal protein S3 [Bacillus clausii KSM-K16]
gi|61215396|sp|Q5WLQ6|RS3_BACSK RecName: Full=30S ribosomal protein S3
gi|56908172|dbj|BAD62699.1| 30S ribosomal protein S3 [Bacillus clausii KSM-K16]
Length = 220
Score = 262 bits (669), Expect = 3e-68, Method: Composition-based stats.
Identities = 99/211 (46%), Positives = 150/211 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ R+GV W+S+W+A +Y LLHED+ IRE+++ LK A V+K+ IER
Sbjct: 1 MGQKVNPVGLRVGVIRDWDSKWYAGKKDYADLLHEDIAIREHVEGRLKDASVSKVEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + +A+PG++IGK G+++E +RK L+ +T +H++++E+ + +++A L+A++I
Sbjct: 61 ANRVNITISTAKPGMVIGKGGSEVEALRKSLNELTGKRVHINISEIKQADLDAKLVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRAMK+A+Q MR GA G+K SGRL GA+++R E Y EG VPL TLRA
Sbjct: 121 ARQLENRISFRRAMKQAIQRTMRAGAKGIKTQVSGRLGGADIARAEHYSEGTVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYGTA A+T YG G+K++V + +
Sbjct: 181 DIDYGTAEADTTYGKIGVKIWVYRGEVLPTK 211
>gi|41410265|ref|NP_963101.1| 30S ribosomal protein S3 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|61215641|sp|Q73SA8|RS3_MYCPA RecName: Full=30S ribosomal protein S3
gi|41399099|gb|AAS06717.1| RpsC [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 280
Score = 262 bits (669), Expect = 4e-68, Method: Composition-based stats.
Identities = 101/215 (46%), Positives = 142/215 (66%), Gaps = 2/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG+ W SRW+A +Y + ED+ IR L L++AG+A + IERT
Sbjct: 1 MGQKINPYGFRLGITTDWKSRWYAD-KQYADYVKEDVAIRRLLSTGLERAGIADVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++GT+ ++IR L +T ++ L++ EV PE A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTGKQVQLNILEVRNPESQAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR
Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
A I YG A+T +G G+KV++ D V
Sbjct: 180 ADIGYGLYEAKTTFGRIGVKVWIYKGDVVGGKREL 214
>gi|154684640|ref|YP_001419801.1| 30S ribosomal protein S3 [Bacillus amyloliquefaciens FZB42]
gi|308172013|ref|YP_003918718.1| 30S ribosomal protein S3 (BS3) [Bacillus amyloliquefaciens DSM 7]
gi|171854993|sp|A7Z0P4|RS3_BACA2 RecName: Full=30S ribosomal protein S3
gi|154350491|gb|ABS72570.1| RpsC [Bacillus amyloliquefaciens FZB42]
gi|307604877|emb|CBI41248.1| ribosomal protein S3 (BS3) [Bacillus amyloliquefaciens DSM 7]
gi|328551823|gb|AEB22315.1| 30S ribosomal protein S3 [Bacillus amyloliquefaciens TA208]
gi|328910082|gb|AEB61678.1| 30S ribosomal protein S3 [Bacillus amyloliquefaciens LL3]
Length = 218
Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats.
Identities = 98/219 (44%), Positives = 149/219 (68%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ R+GV W S+W+A G +Y LHEDLKIRE++ L A V+K+ IER
Sbjct: 1 MGQKVNPVGLRIGVIRDWESKWYA-GKDYADFLHEDLKIREFISKRLSDASVSKVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK G+++E +RK L+++T +H+++ E+ + +++A L+A +I
Sbjct: 60 ANRVNITIHTAKPGMVIGKGGSEVEALRKALNSLTGKRVHINILEIKRADLDAQLVADNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRA K+ +Q MR GA GVK + SGRL GA+++R+E Y EG VPL TLRA
Sbjct: 120 ARQLENRISFRRAQKQQIQRTMRAGAQGVKTMVSGRLGGADIARSEYYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDY T+ A+T YG G+KV++ + + T +
Sbjct: 180 DIDYATSEADTTYGKLGVKVWIYRGEVLPTKKKTEEGGK 218
>gi|315122812|ref|YP_004063301.1| 30S ribosomal protein S3 [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313496214|gb|ADR52813.1| 30S ribosomal protein S3 [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 225
Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats.
Identities = 179/227 (78%), Positives = 201/227 (88%), Gaps = 2/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPILFRLGVNCTW+SRWFARGSEYG LLHEDLKIR+YL+ +LKQAGVAKILIERT
Sbjct: 1 MGQKINPILFRLGVNCTWSSRWFARGSEYGTLLHEDLKIRKYLEGNLKQAGVAKILIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
HK C I VYSARPGLIIGKKG+DI++IRK LS MT SEIHL+VNEV KPEINATLIAQSI
Sbjct: 61 HKKCFITVYSARPGLIIGKKGSDIDRIRKNLSKMTPSEIHLNVNEVSKPEINATLIAQSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRVVFRRAMKRAVQSAMRFGA+G+K+I SGRLNG ELSRTECYLEGRVPLQTLRA
Sbjct: 121 AQQLERRVVFRRAMKRAVQSAMRFGAEGIKIICSGRLNGLELSRTECYLEGRVPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
+IDYG+A+A+TAYG CG+KVYVS+R+ ++ R +EK +
Sbjct: 181 NIDYGSAIAKTAYGICGVKVYVSIREV--SDSDNATSSNRRPLEKSN 225
>gi|284049251|ref|YP_003399590.1| ribosomal protein S3 [Acidaminococcus fermentans DSM 20731]
gi|283953472|gb|ADB48275.1| ribosomal protein S3 [Acidaminococcus fermentans DSM 20731]
Length = 225
Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats.
Identities = 104/219 (47%), Positives = 159/219 (72%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FR+GV W+S+WFA +Y L ED+KIR++++ QAG++++ IERT
Sbjct: 1 MGQKVNPHGFRVGVIADWDSKWFAD-KDYQKNLLEDIKIRDFIKDKQFQAGISRVTIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ RI +Y+A+PG++IG++G++IE ++K L+ MT+S++ +++ EV +P+++ATL+A+++
Sbjct: 60 EQKMRISIYTAKPGIVIGRQGSNIELLKKDLAKMTDSKLDINIIEVKQPDMDATLVAENV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR+ FRRAMK+ V MR GA G+K+ +GRL GAE++RTE Y +G +PL TLRA
Sbjct: 120 ASQLERRIAFRRAMKQCVGRTMRLGAKGIKIQCAGRLGGAEIARTESYRDGSIPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
+IDYGTA A T YG GIKV++ + + A E
Sbjct: 180 NIDYGTAEAHTTYGRIGIKVWIYKGEVLPTKAVKKEAPE 218
>gi|169794600|ref|YP_001712393.1| 30S ribosomal protein S3 [Acinetobacter baumannii AYE]
gi|184159592|ref|YP_001847931.1| 30S ribosomal protein S3 [Acinetobacter baumannii ACICU]
gi|215482189|ref|YP_002324371.1| ribosomal protein S3 [Acinetobacter baumannii AB307-0294]
gi|239503228|ref|ZP_04662538.1| 30S ribosomal protein S3 [Acinetobacter baumannii AB900]
gi|260557033|ref|ZP_05829250.1| ribosomal protein S3 [Acinetobacter baumannii ATCC 19606]
gi|294839741|ref|ZP_06784424.1| 30S ribosomal protein S3 [Acinetobacter sp. 6013113]
gi|294842659|ref|ZP_06787342.1| 30S ribosomal protein S3 [Acinetobacter sp. 6014059]
gi|294860419|ref|ZP_06798188.1| 30S ribosomal protein S3 [Acinetobacter sp. 6013150]
gi|301345016|ref|ZP_07225757.1| 30S ribosomal protein S3 [Acinetobacter baumannii AB056]
gi|301512053|ref|ZP_07237290.1| 30S ribosomal protein S3 [Acinetobacter baumannii AB058]
gi|301595190|ref|ZP_07240198.1| 30S ribosomal protein S3 [Acinetobacter baumannii AB059]
gi|152060837|sp|A3M978|RS3_ACIBT RecName: Full=30S ribosomal protein S3
gi|226697654|sp|B7GW08|RS3_ACIB3 RecName: Full=30S ribosomal protein S3
gi|226697656|sp|B2HZA2|RS3_ACIBC RecName: Full=30S ribosomal protein S3
gi|226697658|sp|B0V6X4|RS3_ACIBY RecName: Full=30S ribosomal protein S3
gi|169147527|emb|CAM85388.1| 30S ribosomal protein S3 [Acinetobacter baumannii AYE]
gi|183211186|gb|ACC58584.1| 30S ribosomal subunit protein S3 [Acinetobacter baumannii ACICU]
gi|193078474|gb|ABO13472.2| 30S ribosomal protein S3 [Acinetobacter baumannii ATCC 17978]
gi|213987863|gb|ACJ58162.1| ribosomal protein S3 [Acinetobacter baumannii AB307-0294]
gi|260409639|gb|EEX02940.1| ribosomal protein S3 [Acinetobacter baumannii ATCC 19606]
gi|322509502|gb|ADX04956.1| 30S ribosomal protein S3 [Acinetobacter baumannii 1656-2]
gi|323519522|gb|ADX93903.1| 30S ribosomal protein S3 [Acinetobacter baumannii TCDC-AB0715]
Length = 250
Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats.
Identities = 111/226 (49%), Positives = 155/226 (68%), Gaps = 1/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI RLGV N+ W+A +Y L +DL++RE+L LK A V+ ILIER
Sbjct: 1 MGQKVHPIGIRLGVVKRHNANWYANPKQYAEYLLKDLQVREFLTKKLKNAMVSNILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ + +ARPG++IGKKG DIEK++++L+N+ +S+NE+ +P+++A L+A++I
Sbjct: 61 SGAAKVTISTARPGIVIGKKGEDIEKLQRELTNIMGVPAQVSINEIDRPDLDARLVAEAI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV+FRRAMKRAVQ+ MR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 ASQLEKRVMFRRAMKRAVQNTMRAGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-SDSTIPAAEHRVVEK 225
IDY T AET YG+ G+KV++ + + PA K
Sbjct: 181 DIDYATMRAETTYGTIGVKVWIFRGEILGGMKQVMNPAPAEERPAK 226
>gi|84394584|ref|ZP_00993288.1| 30S ribosomal protein S3 [Vibrio splendidus 12B01]
gi|86148903|ref|ZP_01067148.1| 30S ribosomal protein S3 [Vibrio sp. MED222]
gi|218710743|ref|YP_002418364.1| 30S ribosomal protein S3 [Vibrio splendidus LGP32]
gi|254764557|sp|B7VLF1|RS3_VIBSL RecName: Full=30S ribosomal protein S3
gi|84374804|gb|EAP91747.1| 30S ribosomal protein S3 [Vibrio splendidus 12B01]
gi|85833311|gb|EAQ51524.1| 30S ribosomal protein S3 [Vibrio sp. MED222]
gi|218323762|emb|CAV20118.1| Ribosomal protein S3 [Vibrio splendidus LGP32]
Length = 232
Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats.
Identities = 108/224 (48%), Positives = 154/224 (68%), Gaps = 1/224 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WN+ WFA +E+ L D K+R++L L++A +++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNATWFANTNEFADNLDGDFKVRQFLTKELQKASLSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++ L+A SI
Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDGQLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV GRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVQVGGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
IDY T+ A T YG GIKV++ + E+ A E + +
Sbjct: 181 DIDYATSSAHTQYGVIGIKVWIF-KGEILGGMPAANAVEPKGDK 223
>gi|120596995|ref|YP_961569.1| 30S ribosomal protein S3 [Shewanella sp. W3-18-1]
gi|146294835|ref|YP_001185259.1| 30S ribosomal protein S3 [Shewanella putrefaciens CN-32]
gi|152060906|sp|A1REC0|RS3_SHESW RecName: Full=30S ribosomal protein S3
gi|189045337|sp|A4YBX7|RS3_SHEPC RecName: Full=30S ribosomal protein S3
gi|120557088|gb|ABM23015.1| SSU ribosomal protein S3P [Shewanella sp. W3-18-1]
gi|145566525|gb|ABP77460.1| SSU ribosomal protein S3P [Shewanella putrefaciens CN-32]
gi|319424586|gb|ADV52660.1| ribosomal protein S3 [Shewanella putrefaciens 200]
Length = 230
Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats.
Identities = 107/226 (47%), Positives = 155/226 (68%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ W S W+A S+Y L+ D ++R++L L+ A V+KI+IER
Sbjct: 1 MGQKVHPNGIRLGITKPWISTWYADKSDYANNLNSDWEVRKFLVEKLQAASVSKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+E +R +S + + +++ E+ KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEVLRAAVSKLAGTPAQINIAEIRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRIGAQGIKVQVSGRLGGAEIARDEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDY T+ + T YG G+KV++ + + I + + ++
Sbjct: 181 DIDYSTSESHTQYGVIGVKVWIFKGEVLDGMLPQIEEPKQQQPKRK 226
>gi|786159|dbj|BAA08837.1| ribosomal protein S3 [Bacillus subtilis]
Length = 218
Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats.
Identities = 99/219 (45%), Positives = 147/219 (67%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ R+GV W S+W+A G +Y LHEDLKIREY+ L A V+K+ IER
Sbjct: 1 MGQKVNPVGLRIGVIRDWESKWYA-GKDYADFLHEDLKIREYISKRLSDASVSKVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK G+++E +RK L+++T +H+++ E+ + +++A L+A +I
Sbjct: 60 ANRVNITIHTAKPGMVIGKGGSEVEALRKALNSLTGKRVHINILEIKRADLDAQLVADNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRA K+ +Q MR GA GVK + SGRL GA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLENRVSFRRAQKQQIQRTMRAGAQGVKTMVSGRLGGADIARPEYYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDY T+ A+T YG G+KV++ + + +
Sbjct: 180 DIDYATSEADTTYGKLGVKVWIYRGEVLPTKKKNEEGGK 218
>gi|254502211|ref|ZP_05114362.1| ribosomal protein S3 [Labrenzia alexandrii DFL-11]
gi|222438282|gb|EEE44961.1| ribosomal protein S3 [Labrenzia alexandrii DFL-11]
Length = 233
Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats.
Identities = 129/218 (59%), Positives = 165/218 (75%), Gaps = 1/218 (0%)
Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVY 69
RLG+N TW+SRW+A +EYG LLHED +IREYL LKQA V+K++IER HK CR+ ++
Sbjct: 1 MRLGINRTWDSRWYANKNEYGDLLHEDFRIREYLMKELKQAAVSKVVIERPHKKCRVSIH 60
Query: 70 SARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV 129
S RPG++IGKKG DIE++RKK++ +TNSE+HL++ EV KPEI+ATL+A SIAQQLERRV
Sbjct: 61 SGRPGVVIGKKGADIERLRKKIAEITNSEVHLNIVEVRKPEIDATLVAASIAQQLERRVA 120
Query: 130 FRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189
FRRAMKRAVQSAMR GA G+++ GRL GAE++R E Y EGRVPL TLRA IDYG A A
Sbjct: 121 FRRAMKRAVQSAMRLGAQGIRINCGGRLGGAEIARIEWYREGRVPLHTLRADIDYGVASA 180
Query: 190 ETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
TAYG CG+KV++ + E+ + D + +
Sbjct: 181 HTAYGVCGVKVWIF-KGEILEHDPMASERRATAASEGN 217
>gi|152989978|ref|YP_001355700.1| 30S ribosomal protein S3 [Nitratiruptor sp. SB155-2]
gi|189045023|sp|A6Q1I4|RS3_NITSB RecName: Full=30S ribosomal protein S3
gi|151421839|dbj|BAF69343.1| 30S ribosomal protein S3 [Nitratiruptor sp. SB155-2]
Length = 229
Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats.
Identities = 107/218 (49%), Positives = 149/218 (68%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N W SRWF ++ + ED KIR++L+ L AG++ I+IERT
Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPDFNKMPERVEEDNKIRKFLKKELYYAGISNIIIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ + +ARPG+IIGKKG DIEK+++KL + E+ +++ E +P+ +A L A+++
Sbjct: 61 AKKLRVTIVAARPGIIIGKKGADIEKLKQKLQKLVGKEVFINIKEEKRPQASAQLAAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV FRRAMK+ +Q+A + G G+KV +GRL GAE++RTE YLEGRVPL TLRA
Sbjct: 121 ATQLERRVAFRRAMKKVIQAAQKAGVKGIKVQVAGRLGGAEMARTEWYLEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
IDYG A A T YG G+KV++ + + P
Sbjct: 181 KIDYGFAEAHTTYGVIGVKVWIFKGEVLQKGIRPEPTE 218
>gi|291542041|emb|CBL15151.1| SSU ribosomal protein S3P [Ruminococcus bromii L2-63]
Length = 223
Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats.
Identities = 106/219 (48%), Positives = 152/219 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+SRWFA ++GA L ED +R+ L+ L G++KI IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWFANKKDFGATLVEDYNLRKTLKAQLYNFGISKIEIERD 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K +I ++ A+PGL+IGK G++IEK+R + M + +++ EV PE++A L+A+SI
Sbjct: 61 GKKVKISIHCAKPGLVIGKGGSEIEKLRAQCEKMLGKPVAINIVEVKAPELDAQLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+R+ FRRAMK ++ +AMR GA G+K++ SGRL GAE++R+E Y EG +PLQTLRA
Sbjct: 121 AQQLEKRISFRRAMKMSIGNAMRRGAKGIKIMCSGRLGGAEIARSEQYHEGTIPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDYG A A T YG G+KV++ + +++ S P E
Sbjct: 181 DIDYGFAEANTTYGKVGVKVWLYKGEVLNEVKSRKPRRE 219
>gi|90414962|ref|ZP_01222924.1| 30S ribosomal protein S3 [Photobacterium profundum 3TCK]
gi|90323901|gb|EAS40501.1| 30S ribosomal protein S3 [Photobacterium profundum 3TCK]
Length = 229
Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats.
Identities = 109/227 (48%), Positives = 155/227 (68%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WN+ WFA E+ L D K+R++L LK+A +++++IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNTTWFANSQEFADNLDGDFKVRQFLIKELKKASLSRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R +S + ++++EV KPE++A L+ SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRAHISKIAGVPAQINISEVRKPELDAQLVGDSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV GRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVQVGGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDY T+ A T YG GIKV++ + + P A+ ++ S
Sbjct: 181 DIDYATSSAHTQYGVIGIKVWIFKGEVLGGMPIEEPKADKPKKQRKS 227
>gi|296282588|ref|ZP_06860586.1| 30S ribosomal protein S3 [Citromicrobium bathyomarinum JL354]
Length = 231
Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats.
Identities = 125/225 (55%), Positives = 165/225 (73%), Gaps = 4/225 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RL +N TW+SRW+A G +Y LL ED++IR+++ L QA ++K++IER
Sbjct: 1 MGQKSNPIGLRLQINRTWDSRWYAEGRDYAKLLKEDIEIRKHIVNSLPQAAISKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K CRI +Y+ARPG+IIGKKG DIEK+R LS MT SE+ L++ E+ KPEI+A L+AQ I
Sbjct: 61 AKLCRISIYAARPGVIIGKKGADIEKLRTTLSRMTESEVKLNIVEIRKPEIDAKLVAQGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL RRV FRRAMKRAVQSA+R GA+G+++ GRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 ADQLVRRVAFRRAMKRAVQSALRLGAEGIRITCGGRLGGAEIARVEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
++DY A A TAYG GIK ++ + E+ D P A+ R++ +
Sbjct: 181 NVDYAEAEALTAYGIIGIKCWIF-KGEILAHD---PTAQDRLMME 221
>gi|269798544|ref|YP_003312444.1| ribosomal protein S3 [Veillonella parvula DSM 2008]
gi|282849870|ref|ZP_06259253.1| ribosomal protein S3 [Veillonella parvula ATCC 17745]
gi|294792800|ref|ZP_06757947.1| ribosomal protein S3 [Veillonella sp. 6_1_27]
gi|294794554|ref|ZP_06759690.1| ribosomal protein S3 [Veillonella sp. 3_1_44]
gi|269095173|gb|ACZ25164.1| ribosomal protein S3 [Veillonella parvula DSM 2008]
gi|282580307|gb|EFB85707.1| ribosomal protein S3 [Veillonella parvula ATCC 17745]
gi|294454884|gb|EFG23257.1| ribosomal protein S3 [Veillonella sp. 3_1_44]
gi|294456699|gb|EFG25062.1| ribosomal protein S3 [Veillonella sp. 6_1_27]
Length = 222
Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats.
Identities = 99/220 (45%), Positives = 156/220 (70%), Gaps = 1/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+G+ W+++W+A ++ A LHED+KIR +L+ L AG+++I IERT
Sbjct: 1 MGQKVNPHGLRVGIVKDWDAKWYAD-KDFAANLHEDVKIRNFLKETLFIAGISRIEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+K ++ +++A+PG++IG+ G IE I+K ++ T+ ++ +++ E+ + +++ATL+A++I
Sbjct: 60 NKRIKLTIHTAKPGMVIGRGGAGIEDIKKAMTRFTDKQVDVNIAEIKQADMDATLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR+ FRRAMK+AV MR GA G+K++ SGRL GAE++R+E Y EG +PL TLRA
Sbjct: 120 AGQLERRIGFRRAMKQAVGRTMRLGAKGIKIMVSGRLGGAEIARSESYREGSIPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
IDYGTA A T YG GIKV++ + + ++ E
Sbjct: 180 DIDYGTAEAHTTYGCIGIKVWIYKGEVLPEAKQAPAKKEE 219
>gi|24371835|ref|NP_715877.1| 30S ribosomal protein S3 [Shewanella oneidensis MR-1]
gi|113968550|ref|YP_732343.1| 30S ribosomal protein S3 [Shewanella sp. MR-4]
gi|114045713|ref|YP_736263.1| 30S ribosomal protein S3 [Shewanella sp. MR-7]
gi|117918663|ref|YP_867855.1| 30S ribosomal protein S3 [Shewanella sp. ANA-3]
gi|27734494|sp|P59183|RS3_SHEON RecName: Full=30S ribosomal protein S3
gi|123130850|sp|Q0HNT1|RS3_SHESM RecName: Full=30S ribosomal protein S3
gi|123326998|sp|Q0I099|RS3_SHESR RecName: Full=30S ribosomal protein S3
gi|152060905|sp|A0KRN0|RS3_SHESA RecName: Full=30S ribosomal protein S3
gi|24345648|gb|AAN53322.1|AE015473_9 ribosomal protein S3 [Shewanella oneidensis MR-1]
gi|113883234|gb|ABI37286.1| SSU ribosomal protein S3P [Shewanella sp. MR-4]
gi|113887155|gb|ABI41206.1| SSU ribosomal protein S3P [Shewanella sp. MR-7]
gi|117610995|gb|ABK46449.1| SSU ribosomal protein S3P [Shewanella sp. ANA-3]
Length = 230
Score = 261 bits (668), Expect = 4e-68, Method: Composition-based stats.
Identities = 109/226 (48%), Positives = 156/226 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ W S W+A S+Y L+ D ++R+YL L+ A V+KI+IER
Sbjct: 1 MGQKVHPNGIRLGITKPWISTWYADKSDYANNLNSDWEVRKYLADKLQAASVSKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+E +R +S + + +++ E+ KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEVLRAAVSKLAGTPAQINIAEIRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRIGAQGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDY T+ + T YG GIKV++ + + I + + ++
Sbjct: 181 DIDYSTSESHTQYGVIGIKVWIFKGEVLDGMLPQIEEPKQQQPKRK 226
>gi|126176349|ref|YP_001052498.1| 30S ribosomal protein S3 [Shewanella baltica OS155]
gi|152998755|ref|YP_001364436.1| 30S ribosomal protein S3 [Shewanella baltica OS185]
gi|160873332|ref|YP_001552648.1| 30S ribosomal protein S3 [Shewanella baltica OS195]
gi|217975195|ref|YP_002359946.1| 30S ribosomal protein S3 [Shewanella baltica OS223]
gi|304412771|ref|ZP_07394373.1| ribosomal protein S3 [Shewanella baltica OS183]
gi|307307435|ref|ZP_07587170.1| ribosomal protein S3 [Shewanella baltica BA175]
gi|189045334|sp|A3DA66|RS3_SHEB5 RecName: Full=30S ribosomal protein S3
gi|189045335|sp|A6WHT4|RS3_SHEB8 RecName: Full=30S ribosomal protein S3
gi|189045336|sp|A9KWA8|RS3_SHEB9 RecName: Full=30S ribosomal protein S3
gi|254764545|sp|B8EBJ9|RS3_SHEB2 RecName: Full=30S ribosomal protein S3
gi|125999554|gb|ABN63629.1| SSU ribosomal protein S3P [Shewanella baltica OS155]
gi|151363373|gb|ABS06373.1| ribosomal protein S3 [Shewanella baltica OS185]
gi|160858854|gb|ABX47388.1| ribosomal protein S3 [Shewanella baltica OS195]
gi|217500330|gb|ACK48523.1| ribosomal protein S3 [Shewanella baltica OS223]
gi|304348851|gb|EFM13267.1| ribosomal protein S3 [Shewanella baltica OS183]
gi|306910223|gb|EFN40656.1| ribosomal protein S3 [Shewanella baltica BA175]
gi|315265559|gb|ADT92412.1| ribosomal protein S3 [Shewanella baltica OS678]
Length = 230
Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats.
Identities = 107/226 (47%), Positives = 156/226 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ W S W+A S+Y + L+ D ++R++L L+ A V+KI+IER
Sbjct: 1 MGQKVHPNGIRLGITKPWISTWYADKSDYASNLNSDWEVRKFLVEKLQAASVSKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+E +R +S + + +++ E+ KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEVLRAAVSKLAGTPAQINIAEIRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRIGAQGIKVQVSGRLGGAEIARDEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDY T+ + T YG G+KV++ + + I + + ++
Sbjct: 181 DIDYSTSESHTQYGVIGVKVWIFKGEVLDGMLPQIEEPKQQQPKRK 226
>gi|91791545|ref|YP_561196.1| 30S ribosomal protein S3 [Shewanella denitrificans OS217]
gi|123166585|sp|Q12SV3|RS3_SHEDO RecName: Full=30S ribosomal protein S3
gi|91713547|gb|ABE53473.1| SSU ribosomal protein S3P [Shewanella denitrificans OS217]
Length = 229
Score = 261 bits (668), Expect = 5e-68, Method: Composition-based stats.
Identities = 110/225 (48%), Positives = 157/225 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ W S W+A S+Y L+ D ++R+YL LK A V+KI+IER
Sbjct: 1 MGQKVHPNGIRLGITKPWISTWYADKSDYANNLNSDWEVRQYLTEKLKAASVSKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+E +R +++ +T + +++ E+ KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEVLRAQVAKITGTTAQINIAEIRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRIGAQGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY T+ + T YG G+KV++ + + I + + K
Sbjct: 181 DIDYSTSESHTQYGVIGVKVWIFKGEVLDGLVPQIEEPKQQPKRK 225
>gi|268680581|ref|YP_003305012.1| ribosomal protein S3 [Sulfurospirillum deleyianum DSM 6946]
gi|268618612|gb|ACZ12977.1| ribosomal protein S3 [Sulfurospirillum deleyianum DSM 6946]
Length = 237
Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats.
Identities = 113/227 (49%), Positives = 156/227 (68%), Gaps = 3/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N W+SRWF + ED KIR +L+ L AGV++ILIERT
Sbjct: 1 MGQKVNPIGLRLGINRNWDSRWFPGKQTLATSIGEDYKIRTFLKKELYYAGVSQILIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ V +ARPG+IIGKKG+DIEK+R KLS + N ++++++ E +P+ +A L A+++
Sbjct: 61 AKKLRVTVVAARPGIIIGKKGSDIEKLRLKLSKLINKDVNVNIKEERRPQSSAQLCAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV FRRAMK+ +Q A + GA G+K+ +GRL GAE++RTE YLEGRVPL TLRA
Sbjct: 121 AMQLERRVAFRRAMKKVIQGAQKSGAKGIKISVAGRLGGAEMARTEWYLEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYG A A T YG G+KV++ + + + + EK++
Sbjct: 181 KIDYGFAEAHTTYGVIGVKVWIFKGEVLV---KGLAPEKEEASEKEN 224
>gi|114561342|ref|YP_748855.1| 30S ribosomal protein S3 [Shewanella frigidimarina NCIMB 400]
gi|122301110|sp|Q089P8|RS3_SHEFN RecName: Full=30S ribosomal protein S3
gi|114332635|gb|ABI70017.1| SSU ribosomal protein S3P [Shewanella frigidimarina NCIMB 400]
Length = 229
Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats.
Identities = 113/225 (50%), Positives = 155/225 (68%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ W S W+A S+Y L+ D ++R+YL LK A V+KI+IER
Sbjct: 1 MGQKVHPNGIRLGITKPWISTWYADKSDYANNLNSDWEVRQYLTEKLKAASVSKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+E +R +S +T + +++ E+ KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEVLRAYVSKITGTTAQINIAEIRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRIGAQGIKVQVSGRLGGAEIARAEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY TA + T YG GIKV++ + + I + + K
Sbjct: 181 DIDYSTAESHTQYGVIGIKVWIFKGEVLDGLVPAIEEPKQQPKRK 225
>gi|268609587|ref|ZP_06143314.1| SSU ribosomal protein S3P [Ruminococcus flavefaciens FD-1]
Length = 261
Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats.
Identities = 98/225 (43%), Positives = 148/225 (65%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+SRW+A +++G L ED +R +++ L AGV +I IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWYANKADFGDTLVEDYNVRNFIKKSLYAAGVPRIEIERF 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
RI ++ A+PG++IG+ G +IEK+R +L M ++ +++ EV +P++++ L+A+ I
Sbjct: 61 ADKVRIHIHCAKPGIVIGRGGAEIEKLRVQLEKMMKKQVFINIIEVKQPDMDSQLVAEKI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A LE RV FRRAMK+++ MR GA G+KV SGRL GAE++R+E Y EG +PLQT+RA
Sbjct: 121 ALDLENRVSFRRAMKQSIGRTMRLGAKGIKVKVSGRLAGAEIARSESYHEGTIPLQTIRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDYG A A+T YG G+KV++ + + + A +V K
Sbjct: 181 DIDYGFAEADTTYGKLGVKVWIYKGEVLKGDAAKAAAQREKVERK 225
>gi|326332197|ref|ZP_08198477.1| ribosomal protein S3 [Nocardioidaceae bacterium Broad-1]
gi|325949903|gb|EGD41963.1| ribosomal protein S3 [Nocardioidaceae bacterium Broad-1]
Length = 275
Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats.
Identities = 100/207 (48%), Positives = 148/207 (71%), Gaps = 1/207 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG++ SRW+A +Y + ED+KIR+ L +++AG+AK+ IERT
Sbjct: 1 MGQKINPNGFRLGISTDHKSRWYAD-KQYKEYVGEDVKIRKLLSKGMERAGIAKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + +++R +L +T ++ L++ EV PE++A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRLRTELEKLTGKQVQLNILEVKNPEVDAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++A+Q+ MR GA G+++ SGRLNGAE+SRTE Y EGRVPL TLRA
Sbjct: 120 AEQLSGRVQFRRAMRKAMQTTMRSGAKGIRIQCSGRLNGAEMSRTEFYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207
IDYG A T +G G+KV++ +
Sbjct: 180 DIDYGFYEARTTFGRIGVKVWIYKGEV 206
>gi|254506464|ref|ZP_05118606.1| ribosomal protein S3 [Vibrio parahaemolyticus 16]
gi|260779497|ref|ZP_05888387.1| SSU ribosomal protein S3p (S3e) [Vibrio coralliilyticus ATCC
BAA-450]
gi|323492125|ref|ZP_08097287.1| 30S ribosomal protein S3 [Vibrio brasiliensis LMG 20546]
gi|219550638|gb|EED27621.1| ribosomal protein S3 [Vibrio parahaemolyticus 16]
gi|260604306|gb|EEX30610.1| SSU ribosomal protein S3p (S3e) [Vibrio coralliilyticus ATCC
BAA-450]
gi|323313686|gb|EGA66788.1| 30S ribosomal protein S3 [Vibrio brasiliensis LMG 20546]
Length = 232
Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats.
Identities = 109/224 (48%), Positives = 154/224 (68%), Gaps = 1/224 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WN+ WFA ++ L D K+R++L LK+A +++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNATWFANTKDFADNLDGDFKVRQFLTSELKKASLSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+ SI
Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDAQLVGDSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
IDY T+ A T YG GIKV++ + E+ A E + +
Sbjct: 181 DIDYATSSAHTQYGVIGIKVWIF-KGEILGGMPAANAVEPKGDK 223
>gi|253995724|ref|YP_003047788.1| 30S ribosomal protein S3 [Methylotenera mobilis JLW8]
gi|253982403|gb|ACT47261.1| ribosomal protein S3 [Methylotenera mobilis JLW8]
Length = 240
Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats.
Identities = 123/211 (58%), Positives = 157/211 (74%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI FRL V W SRW+A + A+L D+K+RE+L L A V++I+IER
Sbjct: 1 MGQKINPIGFRLSVQKNWASRWYANSKNFPAMLQSDIKVREFLNKKLASAAVSRIMIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN +I +YSARPG++IGKKG DIE +R L + +HL++ EV KPE++ATLIAQSI
Sbjct: 61 AKNAKITIYSARPGVVIGKKGEDIESLRSSLQGLMGVPVHLNIEEVRKPELDATLIAQSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+RV+FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLEKRVMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYG A A T YG GIKV+V + + +
Sbjct: 181 DIDYGVAEASTTYGIIGIKVWVFKGEIFAGN 211
>gi|313893202|ref|ZP_07826779.1| ribosomal protein S3 [Veillonella sp. oral taxon 158 str. F0412]
gi|313442555|gb|EFR60970.1| ribosomal protein S3 [Veillonella sp. oral taxon 158 str. F0412]
Length = 221
Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats.
Identities = 99/219 (45%), Positives = 156/219 (71%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+G+ W+++W+A ++ A LHED+KIR +L+ L AG+++I IERT
Sbjct: 1 MGQKVNPHGLRVGIVKDWDAKWYAD-KDFAANLHEDVKIRNFLKETLFIAGISRIEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+K ++ +++A+PG++IG+ G IE I+K ++ T+ ++ +++ E+ + +++ATL+A++I
Sbjct: 60 NKRIKLTIHTAKPGMVIGRGGAGIEDIKKAMTRFTDKQVDVNIAEIKQADMDATLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR+ FRRAMK+AV MR GA G+K++ SGRL GAE++R+E Y EG +PL TLRA
Sbjct: 120 AGQLERRIGFRRAMKQAVGRTMRLGAKGIKIMVSGRLGGAEIARSESYREGSIPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDYGTA A T YG GIKV++ + + ++ E
Sbjct: 180 DIDYGTAEAHTTYGCIGIKVWIYKGEVLPEAKQPAKKEE 218
>gi|160947694|ref|ZP_02094861.1| hypothetical protein PEPMIC_01629 [Parvimonas micra ATCC 33270]
gi|158446828|gb|EDP23823.1| hypothetical protein PEPMIC_01629 [Parvimonas micra ATCC 33270]
Length = 244
Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats.
Identities = 102/231 (44%), Positives = 157/231 (67%), Gaps = 4/231 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+G+ W+SRWFA E+G LL ED IR+ ++ + +GV K+ IER+
Sbjct: 1 MGQKVNPHGLRVGIIKDWDSRWFADKKEFGNLLVEDHNIRKLVKKEVALSGVPKVEIERS 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ V++A+PG++IGK G +E++R K+ +T ++ ++V EV +P+++A L+A++I
Sbjct: 61 ANRVKVTVFTAKPGMVIGKSGAGVEELRVKIEKLTGKKVIVNVEEVKRPDLSAQLVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV FRRAMK+A+Q +++ GA G+K SGRL GA+++RTE Y EG +PLQTLRA
Sbjct: 121 AGQLERRVSFRRAMKQAMQRSLKAGAKGIKTAVSGRLGGADMARTEGYSEGTIPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD----STIPAAEHRVVEKDS 227
I+YG A A+T YG G+KV++ + + PA + R +KD+
Sbjct: 181 DIEYGFAEADTTYGKLGVKVWLYKGEVLPGMKAAVIEERPAKKDRRNKKDN 231
>gi|320352923|ref|YP_004194262.1| 30S ribosomal protein S3P [Desulfobulbus propionicus DSM 2032]
gi|320121425|gb|ADW16971.1| SSU ribosomal protein S3P [Desulfobulbus propionicus DSM 2032]
Length = 221
Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats.
Identities = 103/220 (46%), Positives = 153/220 (69%), Gaps = 1/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ R+ + +W S W+A +Y LH+D IR+YL+ L AGV++I+IERT
Sbjct: 1 MGQKVNPVGLRINITRSWESIWYAD-KDYANNLHQDQLIRKYLKQRLFHAGVSRIVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ ++ +++ARPG++IGKKGT+IE ++K L + + EV +PE +A L+A++I
Sbjct: 60 GEKVKVKLFTARPGIVIGKKGTEIEGLKKDLETKFKRNCFIDIQEVRRPEADAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+R+ FRRAMK+++ SA+RFG G+K+ SGRL GAE+SRTE + EGRVPL TLRA
Sbjct: 120 ASQLEKRIAFRRAMKKSINSALRFGVQGIKISCSGRLGGAEMSRTEWFKEGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
IDYGTA A+T YG G+KV++ + ++D++
Sbjct: 180 DIDYGTAEAKTTYGIIGVKVWIFKGEILADTEQVSEQPSQ 219
>gi|288917236|ref|ZP_06411605.1| ribosomal protein S3 [Frankia sp. EUN1f]
gi|288351427|gb|EFC85635.1| ribosomal protein S3 [Frankia sp. EUN1f]
Length = 320
Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats.
Identities = 100/218 (45%), Positives = 148/218 (67%), Gaps = 1/218 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FRLG+ + SRW+A +Y A + ED+KIR+ + +++AG++++ IERT
Sbjct: 1 MGQKVNPHGFRLGITSEFTSRWYAD-KQYKAYVGEDVKIRKMMSRGMERAGISRVDIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PE +A L+AQ +
Sbjct: 60 QGRLRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPETDAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++A+QSAM+ GA G++V SGRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLSSRVSFRRAMRKAMQSAMKGGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
IDYG A T +G G+KV++ D V
Sbjct: 180 DIDYGFYEARTNFGRIGVKVWIYKGDVVQSRAEREAQE 217
>gi|297569416|ref|YP_003690760.1| ribosomal protein S3 [Desulfurivibrio alkaliphilus AHT2]
gi|296925331|gb|ADH86141.1| ribosomal protein S3 [Desulfurivibrio alkaliphilus AHT2]
Length = 221
Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats.
Identities = 104/212 (49%), Positives = 147/212 (69%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RL + TW+S W+A +Y + ED +++YL+ L AGV+KI I RT
Sbjct: 1 MGQKVNPIGLRLNIVRTWDSIWYAD-KDYSRNILEDQDLKKYLKKRLFHAGVSKIQILRT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IGKKG++I+ ++ L T + + EV +PE +A L+A++I
Sbjct: 60 GDKIRVKLHTARPGIVIGKKGSEIDALKADLEKRTGRVCAVDIQEVRRPEADAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERR+ FRRAMK++V A++FGA G+KV SGRL GAE+SR E Y EGRVPL TLRA
Sbjct: 120 AQQLERRIAFRRAMKKSVNMALKFGAKGIKVACSGRLGGAEMSRREWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
IDYG A A T YG G+KV++ + +++ D
Sbjct: 180 DIDYGLAEARTTYGIIGVKVWIFKGEVLAEED 211
>gi|114567835|ref|YP_754989.1| 30S ribosomal protein S3 [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|122317289|sp|Q0AUI6|RS3_SYNWW RecName: Full=30S ribosomal protein S3
gi|114338770|gb|ABI69618.1| SSU ribosomal protein S3P [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 227
Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats.
Identities = 95/225 (42%), Positives = 158/225 (70%), Gaps = 1/225 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FR+G+ W+S W+A +Y LLHED+K+R++++ AG++K+ I+RT
Sbjct: 1 MGQKVHPKGFRIGIIRDWDSNWYAD-RDYSELLHEDVKLRKFIKDRFYAAGISKVEIQRT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++A+PG+IIG+ G ++E+++ L+ MT +++++ E+ +PE++A ++A+++
Sbjct: 60 GNRIRVTIHTAKPGIIIGRGGIEVERLKVNLAEMTKKNVNINIQEIRRPEMDAQIVAENV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+R+ FRRAMK+ V MR G G+K+ SGRL GAE++RTE Y EG+VPL TLRA
Sbjct: 120 AQQLEKRISFRRAMKQTVGRTMRSGGIGIKIAISGRLGGAEIARTEWYAEGKVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDYG A A T YG GIKV+++ + + ++ + + +E+
Sbjct: 180 DIDYGFAEANTTYGKIGIKVWINRGEILPEAKQRPKEPKQKEMEE 224
>gi|157377443|ref|YP_001476043.1| 30S ribosomal protein S3 [Shewanella sediminis HAW-EB3]
gi|157319817|gb|ABV38915.1| ribosomal protein S3 [Shewanella sediminis HAW-EB3]
Length = 229
Score = 261 bits (667), Expect = 5e-68, Method: Composition-based stats.
Identities = 109/226 (48%), Positives = 153/226 (67%), Gaps = 4/226 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ W S W+A S+Y L D ++R++L+ LKQA V+KI+IER
Sbjct: 1 MGQKVHPNGIRLGITKPWISTWYADKSDYANNLTSDSEVRKFLEKKLKQASVSKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ +T +++ E+ KPE++A L+A I
Sbjct: 61 AKSVRVTIHTARPGVVIGKKGEDVEKLRNAVAKLTGIPAQINIAEIRKPELDAKLVADGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV GRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVQVGGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRD----EVSDSDSTIPAAEHRV 222
IDY TA + T YG G+KV+V + V + + +
Sbjct: 181 DIDYSTAESHTQYGVIGVKVWVFKGEVLDGVVPAHEEPKQQPKRKP 226
>gi|311029055|ref|ZP_07707145.1| 30S ribosomal protein S3 [Bacillus sp. m3-13]
Length = 218
Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats.
Identities = 102/219 (46%), Positives = 152/219 (69%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI R+GV W S+W+A G +Y LLHED+K+REY+ L A V+K+ IER
Sbjct: 1 MGQKVNPIGLRVGVIRDWESKWYA-GKDYANLLHEDIKVREYIAKRLNDASVSKVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ V++A+PG++IGK GT++E +RK L+ +T +H+++ E+ + +++A L+A++I
Sbjct: 60 ANRLNVTVHTAKPGMVIGKGGTEVEALRKALNQLTGKRVHINILEIKRADLDAKLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRA K+++Q AMR GA G+K + SGRL GA+++R+E Y EG VPL TLRA
Sbjct: 120 ARQLENRVSFRRAQKQSLQRAMRAGAKGIKTMVSGRLGGADIARSEHYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDYGTA A+T YG G+KV++ + + +
Sbjct: 180 DIDYGTAEADTTYGKLGVKVWIYRGEVLPTKKKNEEGGK 218
>gi|169632356|ref|YP_001706092.1| 30S ribosomal protein S3 [Acinetobacter baumannii SDF]
gi|226697657|sp|B0VQS4|RS3_ACIBS RecName: Full=30S ribosomal protein S3
gi|169151148|emb|CAO99820.1| 30S ribosomal protein S3 [Acinetobacter baumannii]
Length = 250
Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats.
Identities = 110/226 (48%), Positives = 155/226 (68%), Gaps = 1/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ RLGV N+ W+A +Y L +DL++RE+L LK A V+ ILIER
Sbjct: 1 MGQKVHPVGIRLGVVKRHNANWYANPKQYAEYLLKDLQVREFLTKKLKNAMVSNILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ + +ARPG++IGKKG DIEK++++L+N+ +S+NE+ +P+++A L+A++I
Sbjct: 61 SGAAKVTISTARPGIVIGKKGEDIEKLQRELTNIMGVPAQVSINEIDRPDLDARLVAEAI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV+FRRAMKRAVQ+ MR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 ASQLEKRVMFRRAMKRAVQNTMRAGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-SDSTIPAAEHRVVEK 225
IDY T AET YG+ G+KV++ + + PA K
Sbjct: 181 DIDYATMRAETTYGTIGVKVWIFRGEILGGMKQVMNPAPAEERPAK 226
>gi|255099238|ref|ZP_05328215.1| 30S ribosomal protein S3 [Clostridium difficile QCD-63q42]
Length = 266
Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats.
Identities = 112/224 (50%), Positives = 150/224 (66%), Gaps = 1/224 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFA-RGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER 59
MGQK+NP R+GV W+SRWFA E+G LL ED IR++L+ L AGVAKI IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWFATDKKEFGNLLLEDHNIRKFLKKRLYSAGVAKIEIER 60
Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
+ ++ ++ A+PG++IG+ G IE ++ +L MT I +++ EV + NA L+A++
Sbjct: 61 SANKIKMDLHVAKPGVVIGRAGAGIEALKAELEKMTKKTIIVNIVEVRSTDKNAQLVAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA +ERRV FRRAMK+A+Q AM+ GA G+KV ASGRL GAE++RTE Y EG VPLQTLR
Sbjct: 121 IALAIERRVAFRRAMKQAIQRAMKSGAKGIKVSASGRLGGAEMARTEGYSEGNVPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223
A IDYG A A+T YG GIKV++ + + D P E R
Sbjct: 181 ADIDYGFAEADTTYGKIGIKVWICNGEVLPTRDGVNPREESRKS 224
>gi|126697646|ref|YP_001086543.1| 30S ribosomal protein S3 [Clostridium difficile 630]
gi|254973737|ref|ZP_05270209.1| 30S ribosomal protein S3 [Clostridium difficile QCD-66c26]
gi|255091127|ref|ZP_05320605.1| 30S ribosomal protein S3 [Clostridium difficile CIP 107932]
gi|255305021|ref|ZP_05349193.1| 30S ribosomal protein S3 [Clostridium difficile ATCC 43255]
gi|255312781|ref|ZP_05354364.1| 30S ribosomal protein S3 [Clostridium difficile QCD-76w55]
gi|255515540|ref|ZP_05383216.1| 30S ribosomal protein S3 [Clostridium difficile QCD-97b34]
gi|255648635|ref|ZP_05395537.1| 30S ribosomal protein S3 [Clostridium difficile QCD-37x79]
gi|255654168|ref|ZP_05399577.1| 30S ribosomal protein S3 [Clostridium difficile QCD-23m63]
gi|260681852|ref|YP_003213137.1| 30S ribosomal protein S3 [Clostridium difficile CD196]
gi|260685450|ref|YP_003216583.1| 30S ribosomal protein S3 [Clostridium difficile R20291]
gi|296449793|ref|ZP_06891562.1| 30S ribosomal protein S3 [Clostridium difficile NAP08]
gi|296877857|ref|ZP_06901879.1| 30S ribosomal protein S3 [Clostridium difficile NAP07]
gi|306518758|ref|ZP_07405105.1| 30S ribosomal protein S3 [Clostridium difficile QCD-32g58]
gi|122974217|sp|Q18CG5|RS3_CLOD6 RecName: Full=30S ribosomal protein S3
gi|115249083|emb|CAJ66894.1| 30S ribosomal protein S3 [Clostridium difficile]
gi|260208015|emb|CBA60197.1| 30S ribosomal protein S3 [Clostridium difficile CD196]
gi|260211466|emb|CBE01590.1| 30S ribosomal protein S3 [Clostridium difficile R20291]
gi|296261391|gb|EFH08217.1| 30S ribosomal protein S3 [Clostridium difficile NAP08]
gi|296431157|gb|EFH16982.1| 30S ribosomal protein S3 [Clostridium difficile NAP07]
Length = 271
Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats.
Identities = 112/224 (50%), Positives = 150/224 (66%), Gaps = 1/224 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFA-RGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER 59
MGQK+NP R+GV W+SRWFA E+G LL ED IR++L+ L AGVAKI IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWFATDKKEFGNLLLEDHNIRKFLKKRLYSAGVAKIEIER 60
Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
+ ++ ++ A+PG++IG+ G IE ++ +L MT I +++ EV + NA L+A++
Sbjct: 61 SANKIKMDLHVAKPGVVIGRAGAGIEALKAELEKMTKKTIIVNIVEVRSTDKNAQLVAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA +ERRV FRRAMK+A+Q AM+ GA G+KV ASGRL GAE++RTE Y EG VPLQTLR
Sbjct: 121 IALAIERRVAFRRAMKQAIQRAMKSGAKGIKVSASGRLGGAEMARTEGYSEGNVPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223
A IDYG A A+T YG GIKV++ + + D P E R
Sbjct: 181 ADIDYGFAEADTTYGKIGIKVWICNGEVLPTRDGVNPREESRKS 224
>gi|116667412|pdb|2GY9|C Chain C, Structure Of The 30s Subunit Of A Pre-Translocational E.
Coli Ribosome Obtained By Fitting Atomic Models For Rna
And Protein Components Into Cryo-Em Map Emd-1056
gi|116667464|pdb|2GYB|C Chain C, Structure Of The 30s Subunit Of A Secm-Stalled E. Coli
Ribosome Complex Obtained By Fitting Atomic Models For
Rna And Protein Components Into Cryo-Em Map Emd-1143
gi|224510724|pdb|3FIH|C Chain C, Ternary Complex-Bound E.Coli 70s Ribosome. This Entry
Consists Of The 30s Subunit, Trnas And The Ternary
Complex.
gi|294662219|pdb|2WWL|C Chain C, E.Coli 70s Ribosome Stalled During Translation Of Tnac
Leader Peptide. This File Contains The 30s, The P-Site
Trna And The Tnac Leader Peptide (Part 1 Of 2).
gi|308387967|pdb|3OFO|C Chain C, Crystal Structure Of The E. Coli Ribosome Bound To
Erythromycin. This File Contains The 30s Subunit Of The
First 70s Ribosome.
gi|308387988|pdb|3OFP|C Chain C, Crystal Structure Of The E. Coli Ribosome Bound To
Erythromycin. This File Contains The 30s Subunit Of The
Second 70s Ribosome.
gi|309320025|pdb|3OFA|C Chain C, Crystal Structure Of The E. Coli Ribosome Bound To
Chloramphenicol. This File Contains The 30s Subunit Of
The First 70s Ribosome.
gi|309320046|pdb|3OFB|C Chain C, Crystal Structure Of The E. Coli Ribosome Bound To
Chloramphenicol. This File Contains The 30s Subunit Of
The Second 70s Ribosome.
gi|309320129|pdb|3OFX|C Chain C, Crystal Structure Of The E. Coli Ribosome Bound To
Clindamycin. This File Contains The 30s Subunit Of The
First 70s Ribosome.
gi|309320150|pdb|3OFY|C Chain C, Crystal Structure Of The E. Coli Ribosome Bound To
Clindamycin. This File Contains The 30s Subunit Of The
Second 70s Ribosome
gi|315113614|pdb|3OAQ|C Chain C, Crystal Structure Of The E. Coli Ribosome Bound To
Telithromycin. This File Contains The 30s Subunit Of The
First 70s Ribosome.
gi|315113635|pdb|3OAR|C Chain C, Crystal Structure Of The E. Coli Ribosome Bound To
Telithromycin. This File Contains The 30s Subunit Of The
Second 70s Ribosome
Length = 206
Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats.
Identities = 109/206 (52%), Positives = 148/206 (71%)
Query: 2 GQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTH 61
GQK++P RLG+ WNS WFA E+ L D K+R+YL L +A V++I+IER
Sbjct: 1 GQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPA 60
Query: 62 KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIA 121
K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI
Sbjct: 61 KSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSIT 120
Query: 122 QQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH 181
QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 SQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRAD 180
Query: 182 IDYGTAVAETAYGSCGIKVYVSLRDE 207
IDY T+ A T YG G+KV++ +
Sbjct: 181 IDYNTSEAHTTYGVIGVKVWIFKGEI 206
>gi|306802322|ref|ZP_07438990.1| ribosomal protein S3 [Mycobacterium tuberculosis SUMu008]
gi|308350987|gb|EFP39838.1| ribosomal protein S3 [Mycobacterium tuberculosis SUMu008]
Length = 241
Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats.
Identities = 102/215 (47%), Positives = 143/215 (66%), Gaps = 2/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG+ W SRW+A +Y + ED+ IR L L++AG+A + IERT
Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYAEYVKEDVAIRRLLSSGLERAGIADVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++GT+ ++IR L +T ++ L++ EV PE A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTGKQVQLNILEVKNPESQAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR
Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
A IDYG A+T +G G+KV++ D V
Sbjct: 180 ADIDYGLYEAKTTFGRIGVKVWIYKGDIVGGKREL 214
>gi|117924161|ref|YP_864778.1| 30S ribosomal protein S3P [Magnetococcus sp. MC-1]
gi|152060871|sp|A0L5X9|RS3_MAGSM RecName: Full=30S ribosomal protein S3
gi|117607917|gb|ABK43372.1| SSU ribosomal protein S3P [Magnetococcus sp. MC-1]
Length = 210
Score = 261 bits (667), Expect = 6e-68, Method: Composition-based stats.
Identities = 114/205 (55%), Positives = 153/205 (74%), Gaps = 1/205 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG TW++RWFA Y LL ED+KIR +L+ L A V+KI+IER
Sbjct: 1 MGQKVHPTGFRLGTTKTWDTRWFAD-RNYADLLLEDIKIRAWLKKRLAHASVSKIVIERP 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ RI +++ARPG+IIGKKG DIEK++ + +T+SE+ +++ E+ KPE +A L+A+++
Sbjct: 60 AQKARINIHTARPGIIIGKKGGDIEKLKNDIKAITSSEVQINIVEIRKPEADAQLVAENV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRR+MKRAV SAMR GA+G+++ +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 120 AQQLERRVAFRRSMKRAVTSAMRLGAEGIRINCAGRLGGAEIARTEWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLR 205
IDYG A A T YG G+KV+V
Sbjct: 180 DIDYGFAEAHTTYGIIGVKVWVYKG 204
>gi|113869425|ref|YP_727914.1| 30S ribosomal protein S3 [Ralstonia eutropha H16]
gi|194291016|ref|YP_002006923.1| 30S ribosomal protein s3 [Cupriavidus taiwanensis LMG 19424]
gi|122946539|sp|Q0K625|RS3_RALEH RecName: Full=30S ribosomal protein S3
gi|226697693|sp|B3R7R7|RS3_CUPTR RecName: Full=30S ribosomal protein S3
gi|113528201|emb|CAJ94546.1| SSU ribosomal protein S3 [Ralstonia eutropha H16]
gi|193224851|emb|CAQ70862.1| 30S ribosomal subunit protein S3 [Cupriavidus taiwanensis LMG
19424]
Length = 265
Score = 261 bits (666), Expect = 6e-68, Method: Composition-based stats.
Identities = 112/220 (50%), Positives = 160/220 (72%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V+ W SRW+A +++ +L ED+++R++L+ LK A V +++IER
Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYASNTKFAGMLKEDIEVRDFLKKKLKNASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+N RI +YS+RPG++IGKKG DIE ++ +L +H+++ E+ KPE +A LIA SI
Sbjct: 61 ARNARITIYSSRPGVVIGKKGEDIELLKAELQRRMGVPVHVNIEEIRKPETDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLERR++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
IDYG + AET YG G+KV+V D + +D+ +
Sbjct: 181 DIDYGFSEAETTYGIIGVKVWVYKGDHLGRNDAPVVEEPQ 220
>gi|116624196|ref|YP_826352.1| 30S ribosomal protein S3P [Candidatus Solibacter usitatus
Ellin6076]
gi|122253088|sp|Q01W98|RS3_SOLUE RecName: Full=30S ribosomal protein S3
gi|116227358|gb|ABJ86067.1| SSU ribosomal protein S3P [Candidatus Solibacter usitatus
Ellin6076]
Length = 344
Score = 261 bits (666), Expect = 6e-68, Method: Composition-based stats.
Identities = 107/222 (48%), Positives = 154/222 (69%), Gaps = 3/222 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG N W SRWFA Y LL EDL+++ L+ LK AGV+ I ++R
Sbjct: 1 MGQKVHPYGFRLGFNKPWRSRWFA-KQGYAKLLQEDLELKAALRERLKSAGVSSIEVDRP 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ + ++RPG+IIG+KG +IEK+++ ++ T E+ + + EV KPE++A L+++SI
Sbjct: 60 GNKLRVTIRTSRPGIIIGRKGAEIEKLKQDMAKKTKREVFIDIQEVHKPELDAQLVSESI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV FRRAM++AV SA+RFG G+KV SGRLNGAE++R+E YL+G++PL TLRA
Sbjct: 120 ALQLEKRVAFRRAMRKAVDSALRFGCKGIKVRVSGRLNGAEIARSEWYLQGQLPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE--VSDSDSTIPAAEH 220
IDYG A A T YG GIK ++ + ++ + +P E
Sbjct: 180 DIDYGFAEAHTTYGVIGIKAWLYKGEILDLTKRRNLLPEPEP 221
>gi|52078615|ref|YP_077406.1| 30S ribosomal protein S3 [Bacillus licheniformis ATCC 14580]
gi|52783977|ref|YP_089806.1| 30S ribosomal protein S3 [Bacillus licheniformis ATCC 14580]
gi|319649110|ref|ZP_08003318.1| 30S ribosomal protein S3 [Bacillus sp. BT1B_CT2]
gi|81691248|sp|Q65PA1|RS3_BACLD RecName: Full=30S ribosomal protein S3
gi|52001826|gb|AAU21768.1| ribosomal protein S3 (BS3) [Bacillus licheniformis ATCC 14580]
gi|52346479|gb|AAU39113.1| RpsC [Bacillus licheniformis ATCC 14580]
gi|317388810|gb|EFV69629.1| 30S ribosomal protein S3 [Bacillus sp. BT1B_CT2]
Length = 218
Score = 261 bits (666), Expect = 6e-68, Method: Composition-based stats.
Identities = 97/219 (44%), Positives = 149/219 (68%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ R+GV W S+W+A G +Y LHEDLKIRE++ L A V+K+ IER
Sbjct: 1 MGQKVNPVGLRIGVIRDWESKWYA-GKDYADFLHEDLKIREFINQRLSDASVSKVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK G+++E +RK L+++T +H+++ E+ + +++A L+A +I
Sbjct: 60 ANRVNITIHTAKPGMVIGKGGSEVEALRKALNSLTGKRVHINILEIKRADLDAQLVADNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRA K+ +Q MR GA G+K + SGRL GA+++R+E Y EG VPL TLRA
Sbjct: 120 ARQLENRISFRRAQKQQIQRTMRAGAQGIKTMVSGRLGGADIARSEYYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDY T+ A+T YG G+KV++ + + T +
Sbjct: 180 DIDYATSEADTTYGKLGVKVWIYRGEVLPTKKKTEEGGK 218
>gi|312884697|ref|ZP_07744398.1| 30S ribosomal protein S3 [Vibrio caribbenthicus ATCC BAA-2122]
gi|323495510|ref|ZP_08100584.1| 30S ribosomal protein S3 [Vibrio sinaloensis DSM 21326]
gi|309367610|gb|EFP95161.1| 30S ribosomal protein S3 [Vibrio caribbenthicus ATCC BAA-2122]
gi|323319391|gb|EGA72328.1| 30S ribosomal protein S3 [Vibrio sinaloensis DSM 21326]
Length = 232
Score = 261 bits (666), Expect = 7e-68, Method: Composition-based stats.
Identities = 109/224 (48%), Positives = 154/224 (68%), Gaps = 1/224 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WN+ WFA ++ L D K+R++L LK+A +++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNATWFANTKDFADNLDGDFKVRQFLTSELKKASLSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+ SI
Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRTAVAKIAGVPAQINIAEVRKPELDAQLVGDSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
IDY T+ A T YG GIKV++ + E+ A E + +
Sbjct: 181 DIDYATSSAHTQYGVIGIKVWIF-KGEILGGMPAANAVEPKGDK 223
>gi|125975390|ref|YP_001039300.1| SSU ribosomal protein S3P [Clostridium thermocellum ATCC 27405]
gi|256005323|ref|ZP_05430289.1| ribosomal protein S3 [Clostridium thermocellum DSM 2360]
gi|281419352|ref|ZP_06250367.1| ribosomal protein S3 [Clostridium thermocellum JW20]
gi|152060857|sp|A3DJH8|RS3_CLOTH RecName: Full=30S ribosomal protein S3
gi|125715615|gb|ABN54107.1| SSU ribosomal protein S3P [Clostridium thermocellum ATCC 27405]
gi|255990759|gb|EEU00875.1| ribosomal protein S3 [Clostridium thermocellum DSM 2360]
gi|281406972|gb|EFB37235.1| ribosomal protein S3 [Clostridium thermocellum JW20]
gi|316939506|gb|ADU73540.1| ribosomal protein S3 [Clostridium thermocellum DSM 1313]
Length = 226
Score = 261 bits (666), Expect = 7e-68, Method: Composition-based stats.
Identities = 100/220 (45%), Positives = 146/220 (66%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+G+ W+++W+A + L ED KIR++++ L AG+++I IER
Sbjct: 1 MGQKVNPHGLRIGIIKDWDTKWYANDKNFSEYLVEDFKIRKFIKNKLYSAGISRIEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I V++A+PGLIIGK G IE++RK+L MT I +++ E+ PE++A ++A++I
Sbjct: 61 ANKVKINVHAAKPGLIIGKGGAGIEELRKQLEKMTQKNILINITEIKVPELDAQIVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+R+ FRRAMK+A+ AMR GA G+K SGR+ GAE++RTE Y EG +PLQTLRA
Sbjct: 121 ASQLEKRISFRRAMKQAMARAMRLGAKGIKTAVSGRIAGAEIARTEHYHEGTIPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
IDYG A A T YG G+KV++ + + E
Sbjct: 181 DIDYGFAEANTTYGKLGVKVWIYKGEVLPAVKKDKGRKEE 220
>gi|88860953|ref|ZP_01135589.1| 30S ribosomal subunit protein S3 [Pseudoalteromonas tunicata D2]
gi|88817166|gb|EAR26985.1| 30S ribosomal subunit protein S3 [Pseudoalteromonas tunicata D2]
Length = 235
Score = 261 bits (666), Expect = 7e-68, Method: Composition-based stats.
Identities = 107/210 (50%), Positives = 150/210 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG++ W S W+A ++ +L D K+R +L LK A V+KI+IER
Sbjct: 1 MGQKVHPTGIRLGISKPWVSTWYANTKDFPEMLFGDHKVRTFLTKELKAASVSKIIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R +S + ++++E+ KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRLVVSKIAGVPAQINISEIRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRIGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210
IDY T+ A T YG G+KV++ + +
Sbjct: 181 DIDYSTSEALTTYGIIGVKVWIFKGEVIGG 210
>gi|296113791|ref|YP_003627729.1| 30S ribosomal protein S3 [Moraxella catarrhalis RH4]
gi|295921485|gb|ADG61836.1| 30S ribosomal protein S3 [Moraxella catarrhalis RH4]
gi|326562136|gb|EGE12464.1| 30S ribosomal protein S3 [Moraxella catarrhalis 7169]
gi|326564499|gb|EGE14725.1| 30S ribosomal protein S3 [Moraxella catarrhalis 46P47B1]
gi|326565682|gb|EGE15845.1| 30S ribosomal protein S3 [Moraxella catarrhalis 12P80B1]
gi|326566251|gb|EGE16403.1| 30S ribosomal protein S3 [Moraxella catarrhalis 103P14B1]
gi|326567097|gb|EGE17219.1| 30S ribosomal protein S3 [Moraxella catarrhalis BC1]
gi|326568361|gb|EGE18441.1| 30S ribosomal protein S3 [Moraxella catarrhalis BC7]
gi|326572262|gb|EGE22257.1| 30S ribosomal protein S3 [Moraxella catarrhalis BC8]
gi|326574604|gb|EGE24544.1| 30S ribosomal protein S3 [Moraxella catarrhalis O35E]
gi|326574860|gb|EGE24790.1| 30S ribosomal protein S3 [Moraxella catarrhalis 101P30B1]
gi|326576184|gb|EGE26099.1| 30S ribosomal protein S3 [Moraxella catarrhalis CO72]
Length = 240
Score = 261 bits (666), Expect = 7e-68, Method: Composition-based stats.
Identities = 107/222 (48%), Positives = 152/222 (68%), Gaps = 1/222 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI RLGV N+ W+A +Y L D ++R +L+ L+ A V+ I IER
Sbjct: 1 MGQKVHPIGIRLGVIKKHNANWYANPKQYSEYLLNDFQVRNFLRKKLEGAMVSHIYIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I ++SARPG+IIGKKG DIE ++K+L+ + +++ E+ +P+++A L+A+ I
Sbjct: 61 TGAAKITIHSARPGIIIGKKGEDIESLQKELTKLMGVPAQVNIQEISQPDLDARLVAEGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ++MR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNSMRSGAQGIKVELSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST-IPAAEHR 221
IDY + AET YG+ G+KV++ + + +S P E +
Sbjct: 181 DIDYASVRAETTYGTIGVKVWIFRSEVLDGMNSAYNPVVEDK 222
>gi|300742051|ref|ZP_07072072.1| ribosomal protein S3 [Rothia dentocariosa M567]
gi|311111967|ref|YP_003983189.1| 30S ribosomal protein S3 [Rothia dentocariosa ATCC 17931]
gi|300381236|gb|EFJ77798.1| ribosomal protein S3 [Rothia dentocariosa M567]
gi|310943461|gb|ADP39755.1| 30S ribosomal protein S3 [Rothia dentocariosa ATCC 17931]
Length = 265
Score = 261 bits (666), Expect = 7e-68, Method: Composition-based stats.
Identities = 108/222 (48%), Positives = 155/222 (69%), Gaps = 5/222 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE----YGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQKI+P FRLG+ S+WFA ++ Y + ED+KIRE L +L +AGVAK+
Sbjct: 1 MGQKIHPNGFRLGITTEHVSKWFADSNKPGERYADFVREDVKIRELLAKNLDRAGVAKVE 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + ++IR +L +T +I L++ EV P+++A L+
Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQIQLNILEVSNPDLSAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQSIA+QL RV FRRAMK+A+QSA R GA G+++ SGRL GAE+SR+E Y EGRVPL
Sbjct: 121 AQSIAEQLAARVAFRRAMKKAIQSAQRAGAKGIRIQCSGRLGGAEMSRSEFYREGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
TLRA+IDYG A+T +G G+KV++ D ++D + A
Sbjct: 181 TLRANIDYGFFEAKTTFGRIGVKVWIYKGD-LTDKELAAQQA 221
>gi|323706456|ref|ZP_08118017.1| ribosomal protein S3 [Thermoanaerobacterium xylanolyticum LX-11]
gi|323534176|gb|EGB23966.1| ribosomal protein S3 [Thermoanaerobacterium xylanolyticum LX-11]
Length = 221
Score = 261 bits (666), Expect = 7e-68, Method: Composition-based stats.
Identities = 105/218 (48%), Positives = 155/218 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP R+GV+ W ++WFA+ ++ LL ED+KIR+Y++ + +GV KI IER
Sbjct: 1 MGQKINPRGLRVGVSQDWYAKWFAKDKDFSDLLIEDIKIRDYIKNKIYASGVPKIEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I VY+A+PG++IGK G IE++R+++ MTN ++ +++ EV PE++A L+A++I
Sbjct: 61 ANRIKIDVYTAKPGMVIGKGGAGIEELRQEIEKMTNKKVVINIVEVKNPELDAQLVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR+ FRRAMK+++ AM+ GA G+K+ SGRL GAE++RTE Y EG VPLQTLRA
Sbjct: 121 ASQLERRISFRRAMKQSIARAMKQGAKGIKIACSGRLAGAEIARTERYHEGVVPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
+IDYG A A T YG G+KV+++ + + + A
Sbjct: 181 NIDYGFAEANTTYGKIGVKVWINKGEILPQPKKQVTAE 218
>gi|289523363|ref|ZP_06440217.1| ribosomal protein S3 [Anaerobaculum hydrogeniformans ATCC BAA-1850]
gi|289503055|gb|EFD24219.1| ribosomal protein S3 [Anaerobaculum hydrogeniformans ATCC BAA-1850]
Length = 224
Score = 261 bits (666), Expect = 8e-68, Method: Composition-based stats.
Identities = 99/214 (46%), Positives = 146/214 (68%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ +RLGV W SRW+A + LHED+K+R++++ AG++ + IER
Sbjct: 1 MGQKVHPVGYRLGVIRDWESRWYADKKNFAKQLHEDIKLRKWIKDRWGHAGISTVEIERI 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R +++ARPG++IGK G++I+++R +L MT S++ ++V E+ P+ NA ++A+ I
Sbjct: 61 GNVIRFTIWTARPGVVIGKGGSEIQEVRDELQKMTGSKVMINVQEIKNPDKNAQIVAEGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A LERRV FRRAMK+A+ AM+ GA G+K SGRL GAE++R E YLEGR+PL TLRA
Sbjct: 121 ASALERRVSFRRAMKQAIFRAMKAGALGIKTQCSGRLGGAEIARREWYLEGRLPLSTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
IDYG A A+T YG G+KV++ D +
Sbjct: 181 DIDYGFAEAKTMYGVIGVKVWIYNGDVLPSLKEQ 214
>gi|256847769|ref|ZP_05553214.1| ribosomal protein S3 [Lactobacillus coleohominis 101-4-CHN]
gi|256715458|gb|EEU30434.1| ribosomal protein S3 [Lactobacillus coleohominis 101-4-CHN]
Length = 219
Score = 261 bits (666), Expect = 8e-68, Method: Composition-based stats.
Identities = 96/219 (43%), Positives = 148/219 (67%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FR+GV W+++W+A Y L+EDL+IR+Y++ L A V+ I IER
Sbjct: 1 MGQKINPNGFRVGVIRPWSAKWYADKKHYAEYLNEDLRIRKYIEKRLADASVSTIEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++ARPG++IGK G+++E +R +L+ +T +H++V E+ KP+++A L+ +++
Sbjct: 61 ANRVNVSIHTARPGMVIGKGGSEVEALRLELNKLTGKRVHINVVEIKKPDLDAHLVGENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE R+ FRRAM+ A+Q AMR GA G+K+ +GRLNGA++SR E Y +G VPL TLRA
Sbjct: 121 AQQLENRIAFRRAMRGAMQRAMRAGAKGIKIQVAGRLNGADMSRVESYSDGTVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDY A T YG+ GIK ++ + + + + +
Sbjct: 181 DIDYSWDEARTTYGALGIKTWIYRGEVLPEKKNNSKGGK 219
>gi|184155985|ref|YP_001844325.1| 30S ribosomal protein S3 [Lactobacillus fermentum IFO 3956]
gi|227515493|ref|ZP_03945542.1| ribosomal protein S3 [Lactobacillus fermentum ATCC 14931]
gi|260662758|ref|ZP_05863652.1| 30S ribosomal protein S3 [Lactobacillus fermentum 28-3-CHN]
gi|183227329|dbj|BAG27845.1| 30S ribosomal protein S3 [Lactobacillus fermentum IFO 3956]
gi|227086106|gb|EEI21418.1| ribosomal protein S3 [Lactobacillus fermentum ATCC 14931]
gi|260552839|gb|EEX25838.1| 30S ribosomal protein S3 [Lactobacillus fermentum 28-3-CHN]
Length = 219
Score = 261 bits (666), Expect = 8e-68, Method: Composition-based stats.
Identities = 97/217 (44%), Positives = 147/217 (67%), Gaps = 1/217 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FR+GV W ++W+A Y A L+EDL+IR+Y++ L A V+ + IER
Sbjct: 1 MGQKINPNGFRVGVIRDWTAKWYAD-KNYAAYLNEDLRIRKYIEKRLADASVSTVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G+++E +RK+L+N+TN +H++V E+ KP+++A L+ +S+
Sbjct: 60 ANRVNVSIHTAKPGMVIGKGGSEVEALRKELNNLTNKRVHINVVEIKKPDLDAHLVGESV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRAM+ A+Q MR GA G+K+ +GRLNGA++SR E Y +G VPL TLRA
Sbjct: 120 AEQLENRIAFRRAMRGAMQRTMRAGAKGIKIQVAGRLNGADMSRIESYSDGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
IDY A T YG GIK ++ + + +
Sbjct: 180 DIDYSWDEAHTTYGVLGIKTWIYRGEVLPAKKNNEAK 216
>gi|257054476|ref|YP_003132308.1| 30S ribosomal protein S3P [Saccharomonospora viridis DSM 43017]
gi|256584348|gb|ACU95481.1| SSU ribosomal protein S3P [Saccharomonospora viridis DSM 43017]
Length = 286
Score = 261 bits (666), Expect = 8e-68, Method: Composition-based stats.
Identities = 98/211 (46%), Positives = 143/211 (67%), Gaps = 2/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG+ W SRW+A +Y + ED+KIR+ L +++AG++K+ IERT
Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYSEYVAEDVKIRKLLSTGMERAGISKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PE +A L+AQ I
Sbjct: 60 RERVRVDIHTARPGIVIGRRGAEADRIRGALEKLTGKQVQLNILEVKNPEADAQLVAQGI 119
Query: 121 AQQLERRVVFRRAMKRAVQ-SAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+Q S G++V SGRL GAE+SR+E Y +GRVPL TLR
Sbjct: 120 AEQLSNRVAFRRAMRKAIQTSMRSPQVKGIRVQCSGRLGGAEMSRSEHYRDGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210
A IDYG A T +G G+KV++ D +
Sbjct: 180 ADIDYGFFEARTTFGRIGVKVWIYKGDLIGG 210
>gi|237747371|ref|ZP_04577851.1| small subunit ribosomal protein S3 [Oxalobacter formigenes HOxBLS]
gi|229378722|gb|EEO28813.1| small subunit ribosomal protein S3 [Oxalobacter formigenes HOxBLS]
Length = 282
Score = 261 bits (666), Expect = 8e-68, Method: Composition-based stats.
Identities = 116/225 (51%), Positives = 161/225 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V W+SRW+A + + +L+EDLK R YL+ LK A V +++IER
Sbjct: 1 MGQKIHPTGFRLAVARNWSSRWYAGNTNFAGMLNEDLKARAYLKKKLKNASVGQVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN R +YS+RPG++IGKKG DIE ++ LS + +H+++ EV KPEI+A LIA SI
Sbjct: 61 AKNARFTIYSSRPGVVIGKKGEDIEVLKSDLSRIMGVPVHVNIEEVRKPEIHAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLE+R++FRRAM+RA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLEKRIMFRRAMRRAMQNAMRLGAVGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDYG + A+T YG G+KV+V D + + ++ + +K
Sbjct: 181 DIDYGFSEAQTTYGIIGVKVWVYKGDRLENGEAPKIETPNEEDKK 225
>gi|304405610|ref|ZP_07387269.1| ribosomal protein S3 [Paenibacillus curdlanolyticus YK9]
gi|304345649|gb|EFM11484.1| ribosomal protein S3 [Paenibacillus curdlanolyticus YK9]
Length = 221
Score = 261 bits (666), Expect = 8e-68, Method: Composition-based stats.
Identities = 108/227 (47%), Positives = 158/227 (69%), Gaps = 9/227 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ R+G+ W S+WFA G ++G LL ED+KIREYL+ LK A V++I IER
Sbjct: 1 MGQKVNPVGLRIGIIRDWESKWFA-GKDFGDLLIEDVKIREYLKNKLKDAAVSRIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119
+ + +A+PG++IGK G+++E +R +L+ +TN ++H+++ E+ +++A L+A+S
Sbjct: 60 ANRVNVTINTAKPGMVIGKGGSEVENLRNQLAKITNGKKVHINITEIKHADLDAILVAES 119
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IAQQLERR FRRA+K+A+Q MR GA G+K SGRL GAE++RTE Y EG VPL TLR
Sbjct: 120 IAQQLERRTSFRRALKQAIQRTMRSGAKGIKTSVSGRLGGAEIARTEGYSEGTVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
A IDYGTA A T YG G+KV++ + + PAA+ + ++
Sbjct: 180 ADIDYGTAEAHTTYGRIGVKVWIYRGEIL-------PAAKKKAAQEG 219
>gi|262373515|ref|ZP_06066793.1| ribosomal protein S3 [Acinetobacter junii SH205]
gi|262311268|gb|EEY92354.1| ribosomal protein S3 [Acinetobacter junii SH205]
Length = 250
Score = 261 bits (666), Expect = 8e-68, Method: Composition-based stats.
Identities = 111/226 (49%), Positives = 155/226 (68%), Gaps = 1/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI RLGV N+ W+A +Y L +DL++RE+L LK A V+ ILIER
Sbjct: 1 MGQKVHPIGIRLGVVKRHNANWYASPKQYAEYLLKDLQVREFLTKKLKNAMVSNILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ + +ARPG++IGKKG DIEK++++L+N+ +S+NE+ +P+++A L+A++I
Sbjct: 61 TGAAKVTISTARPGIVIGKKGEDIEKLQRELTNIMGVPAQVSINEIDRPDLDARLVAEAI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV+FRRAMKRAVQ+ MR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 ASQLEKRVMFRRAMKRAVQNTMRAGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-SDSTIPAAEHRVVEK 225
IDY T AET YG+ G+KV++ + + PA K
Sbjct: 181 DIDYATMRAETTYGTIGVKVWIFRGEILGGMKQVMNPAPAEERPAK 226
>gi|299541938|ref|ZP_07052261.1| 30S ribosomal protein S3 [Lysinibacillus fusiformis ZC1]
gi|298725676|gb|EFI66317.1| 30S ribosomal protein S3 [Lysinibacillus fusiformis ZC1]
Length = 217
Score = 261 bits (666), Expect = 8e-68, Method: Composition-based stats.
Identities = 98/213 (46%), Positives = 149/213 (69%), Gaps = 1/213 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+G+ W S+W+A +Y LLHED+K+R+Y++ LK A V+K+ IER
Sbjct: 1 MGQKVHPIGLRVGIIRDWESKWYAE-KDYATLLHEDIKVRKYIETALKDASVSKVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK GT++E +RK LS++T +H+++ E+ + +++A L+A++I
Sbjct: 60 ANRVNITIHTAKPGMVIGKGGTEVENLRKYLSDLTGKRVHINIIEIKRADLDARLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRA K+A+Q +R GA G+K SGRL GA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLENRVSFRRAQKQAIQRTIRAGAKGIKTQVSGRLGGADIARAEHYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
IDY A A+T YG G+KV++ + + S
Sbjct: 180 DIDYAHAEADTTYGKLGVKVWIYRGEVLPTKKS 212
>gi|226309814|ref|YP_002769708.1| 30S ribosomal protein S3 [Brevibacillus brevis NBRC 100599]
gi|254764515|sp|C0ZII6|RS3_BREBN RecName: Full=30S ribosomal protein S3
gi|226092762|dbj|BAH41204.1| 30S ribosomal protein S3 [Brevibacillus brevis NBRC 100599]
Length = 220
Score = 261 bits (666), Expect = 8e-68, Method: Composition-based stats.
Identities = 97/212 (45%), Positives = 152/212 (71%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ R+GV W S+W+A ++ LLHEDLKIR+Y++ LK A V+ I IER
Sbjct: 1 MGQKVSPVGLRIGVIRDWESKWYAD-KDFATLLHEDLKIRKYVKGRLKDAAVSTIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G+++E +RK L+++T +H+++NE+ +P+++ATL+A++I
Sbjct: 60 ANRVNVTIHTAKPGMVIGKGGSEVETLRKTLTDLTGKRVHININEIKRPDLDATLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRA K+++ +R GA G+K + SGRL GA+++R+E Y EG VPL TLRA
Sbjct: 120 ARQLENRISFRRAQKQSITRTLRSGAKGIKTLVSGRLGGADIARSEGYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
IDYGTA A T YG G+KV++ + +
Sbjct: 180 DIDYGTAEAHTTYGRIGVKVWIYRGEVLPARK 211
>gi|254822781|ref|ZP_05227782.1| 30S ribosomal protein S3 [Mycobacterium intracellulare ATCC 13950]
Length = 227
Score = 261 bits (666), Expect = 8e-68, Method: Composition-based stats.
Identities = 102/215 (47%), Positives = 143/215 (66%), Gaps = 2/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG+ W SRW+A +Y + ED+ IR L L++AG+A + IERT
Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYSDYVKEDVAIRRLLSTGLERAGIADVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++GT+ ++IR L +T ++ L++ EV PE A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTGKQVQLNILEVRNPESQAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR
Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
A IDYG A+T +G G+KV++ D V
Sbjct: 180 ADIDYGLYEAKTTFGRIGVKVWIYKGDIVGGKREL 214
>gi|255319809|ref|ZP_05361014.1| ribosomal protein S3 [Acinetobacter radioresistens SK82]
gi|262380342|ref|ZP_06073496.1| ribosomal protein S3 [Acinetobacter radioresistens SH164]
gi|255303128|gb|EET82340.1| ribosomal protein S3 [Acinetobacter radioresistens SK82]
gi|262297788|gb|EEY85703.1| ribosomal protein S3 [Acinetobacter radioresistens SH164]
Length = 250
Score = 261 bits (666), Expect = 8e-68, Method: Composition-based stats.
Identities = 112/228 (49%), Positives = 159/228 (69%), Gaps = 2/228 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI RLGV N+ W+A +Y L +DL++RE+L LK A ++ ILIER
Sbjct: 1 MGQKVHPIGIRLGVVKRHNANWYANPKQYAEYLLKDLQVREFLTKKLKSAMISNILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ + +ARPG++IGKKG DIEK++++L+N+ +S+NE+ +P+++A L+A++I
Sbjct: 61 TGAAKVTISTARPGIVIGKKGEDIEKLQRELTNIMGVPAQVSINEIDRPDLDARLVAEAI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV+FRRAMKRAVQ+ MR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 ASQLEKRVMFRRAMKRAVQNTMRAGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-SDSTIPA-AEHRVVEKD 226
IDY T AET YG+ G+KV++ + + PA AE R ++
Sbjct: 181 DIDYATMRAETTYGTIGVKVWIFRGEILGGMKQVMNPAPAEERPAKRG 228
>gi|212634835|ref|YP_002311360.1| 30S ribosomal protein S3 [Shewanella piezotolerans WP3]
gi|212556319|gb|ACJ28773.1| Ribosomal protein S3 [Shewanella piezotolerans WP3]
Length = 229
Score = 260 bits (665), Expect = 8e-68, Method: Composition-based stats.
Identities = 109/226 (48%), Positives = 155/226 (68%), Gaps = 4/226 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ W S W+A S+Y L D ++R++L+ LKQA V+KI+IER
Sbjct: 1 MGQKVHPNGIRLGITKPWISTWYADKSDYANNLSSDWEVRKFLEKKLKQASVSKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ +T + +++ E+ KPE++A L+A I
Sbjct: 61 AKSVRVTIHTARPGVVIGKKGEDVEKLRNAVAKLTGTPAQINIAEIRKPELDAKLVADGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE----VSDSDSTIPAAEHRV 222
IDY T+ + T YG G+KV+V + V + + +
Sbjct: 181 DIDYSTSESHTQYGVIGVKVWVFKGEVLDGIVPQHEEPKQQPKRKP 226
>gi|50086209|ref|YP_047719.1| 30S ribosomal protein S3 [Acinetobacter sp. ADP1]
gi|61215530|sp|Q6F7R8|RS3_ACIAD RecName: Full=30S ribosomal protein S3
gi|49532185|emb|CAG69897.1| 30S ribosomal protein S3 [Acinetobacter sp. ADP1]
Length = 250
Score = 260 bits (665), Expect = 8e-68, Method: Composition-based stats.
Identities = 111/226 (49%), Positives = 157/226 (69%), Gaps = 1/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI RLGV N+ W+A +Y L +DL++RE+L LK A V+ ILIER
Sbjct: 1 MGQKVHPIGIRLGVVKRHNANWYANPKQYAEYLLKDLQVREFLTKKLKSAMVSNILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ + +ARPG++IGKKG DIEK++++L+N+ +S+NE+ +P+++A L+A++I
Sbjct: 61 TGAAKVTISTARPGIVIGKKGEDIEKLQRELTNIMGVPAQVSINEIDRPDLDARLVAEAI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV+FRRAMKRAVQ++MR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 ASQLEKRVMFRRAMKRAVQNSMRAGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-SDSTIPAAEHRVVEK 225
IDY T AET YG+ G+KV++ + + PA + K
Sbjct: 181 DIDYATMRAETTYGTIGVKVWIFRGEILGGMKQVMNPAPQEERPAK 226
>gi|157960020|ref|YP_001500054.1| 30S ribosomal protein S3 [Shewanella pealeana ATCC 700345]
gi|167626033|ref|YP_001676327.1| 30S ribosomal protein S3 [Shewanella halifaxensis HAW-EB4]
gi|157845020|gb|ABV85519.1| ribosomal protein S3 [Shewanella pealeana ATCC 700345]
gi|167356055|gb|ABZ78668.1| ribosomal protein S3 [Shewanella halifaxensis HAW-EB4]
Length = 229
Score = 260 bits (665), Expect = 9e-68, Method: Composition-based stats.
Identities = 108/226 (47%), Positives = 154/226 (68%), Gaps = 4/226 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ W S W+A S+Y L D ++R++L+ LKQA V+KI+IER
Sbjct: 1 MGQKVHPNGIRLGITKPWISTWYADKSDYANNLSSDWEVRKFLEKKLKQASVSKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ +T +++ E+ KPE++A L+A I
Sbjct: 61 AKSVRVTIHTARPGVVIGKKGEDVEKLRNAVAKLTGIPAQINIAEIRKPELDAKLVADGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRD----EVSDSDSTIPAAEHRV 222
IDY T+ + T YG G+KV+V + + + + +
Sbjct: 181 DIDYSTSESHTQYGVIGVKVWVFKGEVLDGVLPQHEEPKQQPKRKP 226
>gi|90962400|ref|YP_536316.1| 30S ribosomal protein S3 [Lactobacillus salivarius UCC118]
gi|227891550|ref|ZP_04009355.1| 30S ribosomal protein S3 [Lactobacillus salivarius ATCC 11741]
gi|301300212|ref|ZP_07206424.1| ribosomal protein S3 [Lactobacillus salivarius ACS-116-V-Col5a]
gi|123086755|sp|Q1WS96|RS3_LACS1 RecName: Full=30S ribosomal protein S3
gi|90821594|gb|ABE00233.1| SSU ribosomal protein S3P [Lactobacillus salivarius UCC118]
gi|227866697|gb|EEJ74118.1| 30S ribosomal protein S3 [Lactobacillus salivarius ATCC 11741]
gi|300215028|gb|ADJ79444.1| 30S ribosomal protein S3 [Lactobacillus salivarius CECT 5713]
gi|300852153|gb|EFK79825.1| ribosomal protein S3 [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 218
Score = 260 bits (665), Expect = 9e-68, Method: Composition-based stats.
Identities = 97/219 (44%), Positives = 150/219 (68%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+G+ W+++W+A ++ + LHEDL+IR+Y++ L A V+ + IER
Sbjct: 1 MGQKVNPTGLRVGIIRDWDAKWYAE-KDFASNLHEDLRIRKYIESKLADASVSTVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I +++A+PG++IGK G+++EK+RK+L+N+T +H+++ E+ KP+++A L+ +SI
Sbjct: 60 AKRVNISIHTAKPGMVIGKGGSEVEKLRKELNNLTGKRVHINIVEIKKPDLDAKLVGESI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRAMK+A+Q MR GA G+KV +GRLNGA++SR E + EG VPL TLRA
Sbjct: 120 AEQLENRVAFRRAMKQAIQRTMRAGAKGIKVQVAGRLNGADMSRVERFSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDY A T YG G+K ++ + + +
Sbjct: 180 DIDYSWVEAHTTYGKLGVKTWIYRGEVLPAKKENSKGGK 218
>gi|325288584|ref|YP_004264765.1| SSU ribosomal protein S3P [Syntrophobotulus glycolicus DSM 8271]
gi|324963985|gb|ADY54764.1| SSU ribosomal protein S3P [Syntrophobotulus glycolicus DSM 8271]
Length = 220
Score = 260 bits (665), Expect = 9e-68, Method: Composition-based stats.
Identities = 100/221 (45%), Positives = 151/221 (68%), Gaps = 2/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV +W RW+A YG LLHEDL+IR+++ L+QAGV K+ IER
Sbjct: 1 MGQKVNPNGLRIGVIRSWEGRWYAD-KNYGDLLHEDLQIRKFVVQKLQQAGVPKVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119
++ +++A+PG++IG+ GT++E +R+ L +T ++ +++ E+ KPE++A L+A+S
Sbjct: 60 ANRVKVSIHAAKPGIVIGRGGTEVENLRRDLEKLTGGKQVAVNIVEIKKPELDAKLVAES 119
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
+AQQL++RV FRRAMK+ V +R G G+K+ SGRL GAE++RTE Y EG+VPL TLR
Sbjct: 120 VAQQLKKRVSFRRAMKQTVGRTIRAGGQGIKISCSGRLGGAEIARTEWYNEGKVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
A IDYG A A+T YG G+KV++ + + +
Sbjct: 180 ADIDYGFAEADTTYGKIGVKVWIYKGEVLPTKKAAQEEGGK 220
>gi|299143188|ref|ZP_07036268.1| ribosomal protein S3 [Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298517673|gb|EFI41412.1| ribosomal protein S3 [Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 253
Score = 260 bits (665), Expect = 9e-68, Method: Composition-based stats.
Identities = 93/225 (41%), Positives = 146/225 (64%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+G+ W+S+W+A + LL ED KIR+Y++ L AG++K+ IER
Sbjct: 1 MGQKVNPHGLRVGIIKDWDSKWYANKKNFADLLVEDNKIRKYIKKKLYTAGISKVEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ + +A+PG++IG+ G +E++R +L +T + L++ E+ ++++ L+A++I
Sbjct: 61 ANKVKVSISTAKPGMVIGRGGVGVEELRTELEKLTKKSVVLNIEEIKNQDLDSQLVAEAI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+ LERRV FRRAMK+A+Q MR GA G+K SGRL GA+++RTE Y EG +PLQTLRA
Sbjct: 121 AESLERRVSFRRAMKQAIQRTMRAGALGIKTAVSGRLGGADMARTEGYSEGTIPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDYG A A+T YG G+KV++ + + + +
Sbjct: 181 DIDYGFAEADTTYGKLGVKVWLYKGEVLPEKKDEKKNNRDNKRRR 225
>gi|222148372|ref|YP_002549329.1| 30S ribosomal protein S3 [Agrobacterium vitis S4]
gi|221735360|gb|ACM36323.1| 30S ribosomal protein S3 [Agrobacterium vitis S4]
Length = 226
Score = 260 bits (665), Expect = 9e-68, Method: Composition-based stats.
Identities = 144/215 (66%), Positives = 174/215 (80%), Gaps = 3/215 (1%)
Query: 13 GVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSAR 72
G+N TW+SRWFA +EYG LLHEDLKIR YL LKQAG+AK++IER HK CR+ ++SAR
Sbjct: 2 GINRTWDSRWFADNAEYGKLLHEDLKIRAYLMDELKQAGIAKVVIERPHKKCRVTIHSAR 61
Query: 73 PGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRR 132
PGLIIGKKG DIEK+RKKLS MTNSE HL++ EV KPE++ATL+AQSIAQQLERR+ FRR
Sbjct: 62 PGLIIGKKGADIEKLRKKLSEMTNSETHLNIVEVRKPEVDATLVAQSIAQQLERRIAFRR 121
Query: 133 AMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETA 192
AMKRAVQSAMR GA+G+K+ +GRL GAE++RTE Y EGRVPL TLRA IDYG A A TA
Sbjct: 122 AMKRAVQSAMRLGAEGIKITCAGRLGGAEIARTEWYREGRVPLHTLRADIDYGVAEATTA 181
Query: 193 YGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
YG CGIKV++ + E+ + D A+E R +E D+
Sbjct: 182 YGICGIKVWIF-KGEILEHDPM--ASERRALESDA 213
>gi|311744803|ref|ZP_07718599.1| 30S ribosomal protein S3 [Aeromicrobium marinum DSM 15272]
gi|311311920|gb|EFQ81841.1| 30S ribosomal protein S3 [Aeromicrobium marinum DSM 15272]
Length = 276
Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats.
Identities = 96/207 (46%), Positives = 147/207 (71%), Gaps = 1/207 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG++ SRW+A Y + + ED+KIR+ L + +AG++++ IERT
Sbjct: 1 MGQKINPHGFRLGISTDHKSRWYAD-KLYSSYVGEDVKIRKLLTKGMDRAGISRVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV +PE++A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKQPEMDAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++A+Q+ MR GA G+++ SGRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLSGRVQFRRAMRKAMQTTMRSGAKGIRIQCSGRLGGAEMSRSEFYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207
+DYG A+T +G G+KV++ +
Sbjct: 180 DVDYGFYEAKTTFGRIGVKVWIYKGEV 206
>gi|254455646|ref|ZP_05069075.1| ribosomal protein S3 [Candidatus Pelagibacter sp. HTCC7211]
gi|207082648|gb|EDZ60074.1| ribosomal protein S3 [Candidatus Pelagibacter sp. HTCC7211]
Length = 226
Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats.
Identities = 108/208 (51%), Positives = 151/208 (72%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ FRLGVN W+S W+A+ ++G L ED KIREY++ ++ +GV+K++IERT
Sbjct: 1 MGQKVNPVGFRLGVNRGWDSVWYAKKKDFGNYLIEDFKIREYIKKNVINSGVSKVMIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
C + +Y++RPG +IGKKG+DI+KI+ LS T +E+ L++ EV KPE NA L+A++I
Sbjct: 61 SNKCYVTIYTSRPGFVIGKKGSDIDKIKNNLSKFTTNEVALNIKEVKKPETNAYLVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQL +R+ +RRAMKRA+QS +R GA G+KV SGRL G E++RTE +G +P TLRA
Sbjct: 121 AQQLVKRISYRRAMKRAMQSCIRLGARGIKVSVSGRLGGNEIARTEWLRDGSIPSHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
IDY A A T YG GIKV++ +
Sbjct: 181 DIDYAEAEALTTYGIIGIKVWIYKGEVF 208
>gi|255326848|ref|ZP_05367924.1| ribosomal protein S3 [Rothia mucilaginosa ATCC 25296]
gi|283457551|ref|YP_003362134.1| 30S ribosomal protein S3 [Rothia mucilaginosa DY-18]
gi|255296065|gb|EET75406.1| ribosomal protein S3 [Rothia mucilaginosa ATCC 25296]
gi|283133549|dbj|BAI64314.1| ribosomal protein S3 [Rothia mucilaginosa DY-18]
Length = 265
Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats.
Identities = 109/222 (49%), Positives = 156/222 (70%), Gaps = 5/222 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE----YGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQKI+P FRLG+ S+WFA ++ Y + ED+KIRE L +L +AGVAK+
Sbjct: 1 MGQKIHPNGFRLGITTDHVSKWFADSNKPGERYADFVREDVKIRELLAKNLDRAGVAKVE 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + ++IR +L +TN +I L++ EV P+++A L+
Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTNKQIQLNILEVANPDLSAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQSIA+QL RV FRRAMK+A+QSA R GA G+++ SGRL GAE+SR+E Y EGRVPL
Sbjct: 121 AQSIAEQLASRVAFRRAMKKAIQSAQRAGAKGIRIQCSGRLGGAEMSRSEFYREGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
TLRA+IDYG A+T +G G+KV++ D ++D + A
Sbjct: 181 TLRANIDYGFFEAKTTFGRIGVKVWIYKGD-LTDKELAAQQA 221
>gi|221194416|ref|ZP_03567473.1| ribosomal protein S3 [Atopobium rimae ATCC 49626]
gi|221185320|gb|EEE17710.1| ribosomal protein S3 [Atopobium rimae ATCC 49626]
Length = 235
Score = 260 bits (665), Expect = 1e-67, Method: Composition-based stats.
Identities = 107/222 (48%), Positives = 152/222 (68%), Gaps = 4/222 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+ P FRLGV W SRW+A Y L DL IR YL+ L++A +A+I IER
Sbjct: 1 MGQKVQPTGFRLGVTENWRSRWYAD-KNYAENLGNDLAIRSYLEKRLEKAAIARIDIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDI---EKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117
++ ++SARPG++IGKKG +I ++++ + ++++ V EV +PE++A L+A
Sbjct: 60 GDKVKVTIFSARPGIVIGKKGAEIDGLRADLERVAKVGKGQVNVDVIEVKRPELDANLVA 119
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+SIA+QLE+RV FRRAM++AVQSA + GA G+++ SGRLNGAE+ R E Y EGRVPL T
Sbjct: 120 ESIAEQLEQRVAFRRAMRKAVQSARKAGAKGIRIQCSGRLNGAEMGRREWYREGRVPLHT 179
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
LRA + YGTA A T G+CGIKV++ L +++ + PA E
Sbjct: 180 LRAVVAYGTATARTTMGACGIKVWIYLGEKMPGQPAPNPALE 221
>gi|325000486|ref|ZP_08121598.1| ribosomal protein S3 [Pseudonocardia sp. P1]
Length = 230
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 104/220 (47%), Positives = 149/220 (67%), Gaps = 2/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG+ W SRW+A +Y + ED++IR+ L +++AG++K+ IERT
Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYSEYVKEDVEIRKMLSKGMERAGISKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV E +A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGNLEKLTKKQVQLNILEVKASESDAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMR-FGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAMR G++V SGRL GAE+SR+E Y EGRVPL TLR
Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRSPQVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
A IDYG A T++G G+KV++ D V PAAE
Sbjct: 180 ADIDYGLFEARTSFGRIGVKVWIYKGDVVGGRREGAPAAE 219
>gi|319955862|ref|YP_004167125.1| SSU ribosomal protein s3p [Nitratifractor salsuginis DSM 16511]
gi|319418266|gb|ADV45376.1| SSU ribosomal protein S3P [Nitratifractor salsuginis DSM 16511]
Length = 230
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 112/224 (50%), Positives = 153/224 (68%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N W SRW+ + + ED KIR++L+ L AGV+ I+IERT
Sbjct: 1 MGQKVNPIGLRLGINRNWESRWYPAKDRAPSFVAEDHKIRKFLKKELFFAGVSNIIIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K RI + +ARPG+IIGK+G DIEK++ KL M ++ +++ E +P+ +A L A++I
Sbjct: 61 VKKIRITIVTARPGIIIGKRGADIEKLKAKLQKMLGKDVAINIKEEKRPQASAQLAAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV FRRAMK+A+Q A++ GA G+KV SGRL GAE++RTE YLEGRVPL TLRA
Sbjct: 121 ATQLERRVAFRRAMKKAIQGALKSGAKGIKVQVSGRLGGAEMARTEWYLEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
IDYG A A T YG+ G+KV++ + + P E + +
Sbjct: 181 KIDYGFAEALTTYGNIGVKVWIFKGEVLQKGIQPEPKEERKSRK 224
>gi|254776901|ref|ZP_05218417.1| 30S ribosomal protein S3 [Mycobacterium avium subsp. avium ATCC
25291]
Length = 224
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 102/215 (47%), Positives = 143/215 (66%), Gaps = 2/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG+ W SRW+A +Y + ED+ IR L L++AG+A + IERT
Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYADYVKEDVAIRRLLSTGLERAGIADVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++GT+ ++IR L +T ++ L++ EV PE A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTGKQVQLNILEVRNPESQAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR
Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
A IDYG A+T +G G+KV++ D V
Sbjct: 180 ADIDYGLYEAKTTFGRIGVKVWIYKGDVVGGKREL 214
>gi|284992868|ref|YP_003411422.1| 30S ribosomal protein S3 [Geodermatophilus obscurus DSM 43160]
gi|284066113|gb|ADB77051.1| ribosomal protein S3 [Geodermatophilus obscurus DSM 43160]
Length = 308
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 95/208 (45%), Positives = 142/208 (68%), Gaps = 2/208 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FRLG+ + SRW+A Y + ED+ IR+ + +++AG++K+ IERT
Sbjct: 1 MGQKVNPHGFRLGITTDYKSRWYAD-KLYKDYVKEDVAIRKLMSKGMERAGISKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV PE +A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQVQLNILEVKNPEADAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMR-FGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSA R G++V SGRL G E+SR+E Y EGRVPL TLR
Sbjct: 120 AEQLSSRVSFRRAMRKAMQSAQRSPQVKGIRVQCSGRLGGTEMSRSEFYREGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDE 207
A+IDYG A T +G G+KV++ D
Sbjct: 180 ANIDYGIYEARTTFGRIGVKVWIYKGDV 207
>gi|226953877|ref|ZP_03824341.1| 30S ribosomal protein S3 [Acinetobacter sp. ATCC 27244]
gi|294651628|ref|ZP_06728932.1| 30S ribosomal protein S3 [Acinetobacter haemolyticus ATCC 19194]
gi|226835360|gb|EEH67743.1| 30S ribosomal protein S3 [Acinetobacter sp. ATCC 27244]
gi|292822477|gb|EFF81376.1| 30S ribosomal protein S3 [Acinetobacter haemolyticus ATCC 19194]
Length = 250
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 110/226 (48%), Positives = 155/226 (68%), Gaps = 1/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI RLGV N+ W+A +Y L +DL++RE+L LK A ++ ILIER
Sbjct: 1 MGQKVHPIGIRLGVVKRHNANWYASPKQYAEYLLKDLQVREFLTKKLKNAMISNILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ + +ARPG++IGKKG DIEK++++L+N+ +S+NE+ +P+++A L+A++I
Sbjct: 61 TGAAKVTISTARPGIVIGKKGEDIEKLQRELTNIMGVPAQVSINEIDRPDLDARLVAEAI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV+FRRAMKRAVQ+ MR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 ASQLEKRVMFRRAMKRAVQNTMRAGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-SDSTIPAAEHRVVEK 225
IDY T AET YG+ G+KV++ + + PA K
Sbjct: 181 DIDYATMRAETTYGTIGVKVWIFRGEILGGMKQVMNPAPAEERPAK 226
>gi|78776493|ref|YP_392808.1| 30S ribosomal protein S3 [Sulfurimonas denitrificans DSM 1251]
gi|91207849|sp|Q30TV8|RS3_SULDN RecName: Full=30S ribosomal protein S3
gi|78497033|gb|ABB43573.1| SSU ribosomal protein S3P [Sulfurimonas denitrificans DSM 1251]
Length = 241
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 115/226 (50%), Positives = 153/226 (67%), Gaps = 3/226 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N W SRWF A L ED KIR YL+ L AGV+ I+IERT
Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPNFKTAAAYLGEDHKIRTYLKKELYYAGVSNIVIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ + +ARPG+IIGKKG+DIEK++ L + + +++ E K +I++ L+A+++
Sbjct: 61 AKRLRVTIIAARPGIIIGKKGSDIEKLKDTLQALVGKPLSVNIKEEKKAQISSQLVAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV FRRAMK+ +Q+A R GA G+KV SGRL GAE++RTE YLEGRVPL TLRA
Sbjct: 121 ATQLERRVAFRRAMKKVMQNAQRGGAKGIKVSVSGRLGGAEMARTEWYLEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDYG A A T YG G+KV++ + ++ IPA +K+
Sbjct: 181 KIDYGFAEAHTTYGCIGVKVWIFKGEVLT---KGIPAEVKEEQQKE 223
>gi|94676477|ref|YP_588782.1| ribosomal protein S3 [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|123260548|sp|Q1LTD2|RS3_BAUCH RecName: Full=30S ribosomal protein S3
gi|94219627|gb|ABF13786.1| ribosomal protein S3 [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 233
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 108/219 (49%), Positives = 153/219 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG+ WNS W+A E+ L+ D K+R++L L +A +++++IER
Sbjct: 1 MGQKVHPNGFRLGIIKYWNSTWYANKKEFAQYLNSDFKVRQFLASELTKASISRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ RI +++ARPG+IIGKKG D+EK+RK +S + +++ EV KPE+NA L+A+SI
Sbjct: 61 AKSIRITIHTARPGIIIGKKGEDVEKLRKSISLIAGVPSQINIAEVRKPELNAKLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
Q+ERRV+FRRAMKRAVQ+ +R GA G+KV SGRL+G E++RTE Y EGRVPL TLRA
Sbjct: 121 VSQIERRVIFRRAMKRAVQNTIRLGAKGIKVEVSGRLSGVEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDY + A T YG G+KV++ + + + P E
Sbjct: 181 DIDYHVSEAHTTYGVIGVKVWIFKGEILDGMMAVEPTIE 219
>gi|312135490|ref|YP_004002828.1| 30S ribosomal protein S3 [Caldicellulosiruptor owensensis OL]
gi|311775541|gb|ADQ05028.1| ribosomal protein S3 [Caldicellulosiruptor owensensis OL]
Length = 222
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 99/222 (44%), Positives = 149/222 (67%), Gaps = 1/222 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG W+SRWFA ++ + ED KIR +++ L AG+++I IER
Sbjct: 1 MGQKVHPKGFRLGFIRDWDSRWFANDKDFDKYVLEDYKIRRHIKEKLYNAGISRIEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119
K ++I+++A+PG++IG+ G+ +E +RK+L +T I L + E+ PE++A L+A++
Sbjct: 61 AKRVKVIIHTAKPGIVIGRAGSGVEALRKELEKLTGGKTISLDIKEIKVPELDAQLVAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA QLE+RV FR+AMK+A+ A+R GA G+K + SGRL GA+++RTE Y EGR+PLQTLR
Sbjct: 121 IAAQLEKRVSFRKAMKQAMARALRSGAKGIKTMVSGRLGGADIARTEWYKEGRIPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
A IDYG A A T YG G+K ++ D + + +
Sbjct: 181 ADIDYGFAEAHTTYGRIGVKTWIYKGDILPQKVAASEKGGDK 222
>gi|308233858|ref|ZP_07664595.1| ribosomal protein S3 [Atopobium vaginae DSM 15829]
gi|328943566|ref|ZP_08241031.1| 30S ribosomal protein S3 [Atopobium vaginae DSM 15829]
gi|327491535|gb|EGF23309.1| 30S ribosomal protein S3 [Atopobium vaginae DSM 15829]
Length = 236
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 97/222 (43%), Positives = 147/222 (66%), Gaps = 3/222 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+ P FRLG+ W SRW+A + Y + DL+IR+YL+ L A ++++ IER
Sbjct: 1 MGQKVQPTGFRLGITEQWRSRWYAGKNNYAQNVGSDLEIRKYLKKRLASAALSRVEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDI---EKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117
++++ ++RPG++IGKKGT+I K +K++ + ++++ V E+ +P+++A L A
Sbjct: 61 GDKVKVVILTSRPGIVIGKKGTEIDDLRKDVQKIAKVGKGDVNVEVVEIKQPDLDAQLTA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
IA+QLE RV FRRA+++AVQ A + GA G+++ SGRLNGAE+ R E EGRVPL T
Sbjct: 121 DRIAEQLEGRVAFRRAVRKAVQGATKAGAKGIRIQCSGRLNGAEMGRVEWSREGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
LRA IDY A A T G+ GIKV++ L +++ + PA E
Sbjct: 181 LRAKIDYAQATASTTMGAVGIKVWIYLGEKLPGQSAPNPALE 222
>gi|330470167|ref|YP_004407910.1| ribosomal protein S3 [Verrucosispora maris AB-18-032]
gi|328813138|gb|AEB47310.1| ribosomal protein S3 [Verrucosispora maris AB-18-032]
Length = 284
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 102/219 (46%), Positives = 149/219 (68%), Gaps = 2/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG++ W SRWFA Y + ED+KIR + L++AG++K+ IERT
Sbjct: 1 MGQKVHPHGFRLGISTDWKSRWFAD-KLYKDYIGEDVKIRRMMSKGLERAGISKVDIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG+KG + ++IR +L +T ++ L++ EV PE +A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRKGAEADRIRGELEKLTGKQVQLNIIEVKNPESDAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFG-ADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAM+ G++V SGRL GAE+SRTE Y EGRVPL TLR
Sbjct: 120 AEQLSSRVSFRRAMRKAMQSAMKNPMCKGIRVQVSGRLGGAEMSRTEFYREGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
A+I+YG A T +G G+KV++ D V ++ A
Sbjct: 180 ANIEYGFFEARTTFGRIGVKVWIYKGDAVPGRETPAEAP 218
>gi|262280219|ref|ZP_06058003.1| ribosomal protein S3 [Acinetobacter calcoaceticus RUH2202]
gi|262257997|gb|EEY76731.1| ribosomal protein S3 [Acinetobacter calcoaceticus RUH2202]
Length = 250
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 111/226 (49%), Positives = 158/226 (69%), Gaps = 2/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI RLGV N+ W+A +Y L +DL++RE+L LK A ++ ILIER
Sbjct: 1 MGQKVHPIGIRLGVVKRHNANWYASPKQYAEYLLKDLQVREFLNKKLKNAMISNILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ + +ARPG++IGKKG DIEK++++L+++ +S+NE+ +P+++A L+A++I
Sbjct: 61 SGAAKVTISTARPGIVIGKKGEDIEKLQRELTSIMGVPAQVSINEIDRPDLDARLVAEAI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV+FRRAMKRAVQ+ MR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 ASQLEKRVMFRRAMKRAVQNTMRAGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-SDSTIPA-AEHRVVE 224
IDY T AET YG+ G+KV++ + + PA AE R +
Sbjct: 181 DIDYATVRAETTYGTIGVKVWIFRGEILGGMKQVMNPAPAEDRPAK 226
>gi|291280142|ref|YP_003496977.1| 30S ribosomal protein S3 [Deferribacter desulfuricans SSM1]
gi|290754844|dbj|BAI81221.1| 30S ribosomal protein S3 [Deferribacter desulfuricans SSM1]
Length = 224
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 113/216 (52%), Positives = 158/216 (73%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI FRLG+N W S WF EY L EDLKIR++L+ LKQAG++ I IER
Sbjct: 1 MGQKVHPIGFRLGINKDWKSVWFFGKKEYREKLMEDLKIRDFLKKRLKQAGLSNIQIERM 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
RII+ ++RPG++IGKKG +IE ++K+L +T++++ + + EV KPEI+A L+A+++
Sbjct: 61 GSKVRIILNTSRPGIVIGKKGAEIENLKKELRKLTDNDVIIVIREVKKPEIDAQLVAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A Q+ERRV FRRAMK+AV A++ GA G+K+ SGRL GAE++RTE Y++GRVPLQTLRA
Sbjct: 121 AMQIERRVAFRRAMKKAVLQALKGGAQGIKIACSGRLAGAEMARTEWYIKGRVPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
IDYG A A+T YG G+KV++ + V + D
Sbjct: 181 DIDYGFAEAQTTYGIIGVKVWIFKGEIVENKDKIAA 216
>gi|262203618|ref|YP_003274826.1| 30S ribosomal protein S3 [Gordonia bronchialis DSM 43247]
gi|262086965|gb|ACY22933.1| ribosomal protein S3 [Gordonia bronchialis DSM 43247]
Length = 272
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 101/215 (46%), Positives = 143/215 (66%), Gaps = 2/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG+ W SRW+A +Y + ED+ IR+ L L++AG+AK+ IERT
Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYADYVKEDVAIRKLLSQGLERAGIAKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV E A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNAESEAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR
Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
A IDYG A+T +G G+KV++ D V
Sbjct: 180 ADIDYGLYEAKTTFGRIGVKVWIYKGDIVGGRREL 214
>gi|312622051|ref|YP_004023664.1| 30S ribosomal protein S3 [Caldicellulosiruptor kronotskyensis 2002]
gi|312202518|gb|ADQ45845.1| ribosomal protein S3 [Caldicellulosiruptor kronotskyensis 2002]
Length = 222
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 98/222 (44%), Positives = 150/222 (67%), Gaps = 1/222 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FR+G+ W+SRWFA ++ + ED KIR +++ L AG+++I IER
Sbjct: 1 MGQKVHPKGFRIGIIRDWDSRWFANDKDFQKYVLEDYKIRRHIKEKLYHAGISRIEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119
K ++I+++A+PG++IG+ G+ +E +RK+L +T I L + E+ PE++A L+A++
Sbjct: 61 AKRVKVIIHTAKPGIVIGRAGSGVEALRKELEKLTGGKTISLDIKEIKVPELDAQLVAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA QLE+RV FR+AMK+A+ A+R GA G+K + SGRL GA+++RTE Y EGR+PLQTLR
Sbjct: 121 IAAQLEKRVSFRKAMKQAMARALRSGAKGIKTMVSGRLGGADIARTEWYKEGRIPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
A IDYG A A T YG G+K ++ D + + +
Sbjct: 181 ADIDYGFAEAHTTYGRIGVKTWIYKGDILPQKAAASEKGGDK 222
>gi|238018629|ref|ZP_04599055.1| hypothetical protein VEIDISOL_00464 [Veillonella dispar ATCC 17748]
gi|237865100|gb|EEP66390.1| hypothetical protein VEIDISOL_00464 [Veillonella dispar ATCC 17748]
Length = 221
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 98/219 (44%), Positives = 155/219 (70%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+G+ W+++W+A ++ A LHED+KIR +L+ L AG+++I IERT
Sbjct: 1 MGQKVNPHGLRVGIVKDWDAKWYAD-KDFAANLHEDVKIRNFLKETLFIAGISRIEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+K ++ +++A+PG++IG+ G IE I+K ++ T+ ++ +++ E+ + +++A L+A++I
Sbjct: 60 NKRIKLTIHTAKPGMVIGRGGAGIEDIKKAMTRFTDKQVDVNIAEIKQADMDAILVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR+ FRRAMK+AV MR GA G+K++ SGRL GAE++R+E Y EG +PL TLRA
Sbjct: 120 AGQLERRIGFRRAMKQAVGRTMRLGAKGIKIMVSGRLGGAEIARSESYREGSIPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDYGTA A T YG GIKV++ + + ++ E
Sbjct: 180 DIDYGTAEAHTTYGCIGIKVWIYKGEVLPEAKQPAKKEE 218
>gi|302336376|ref|YP_003801583.1| SSU ribosomal protein S3P [Olsenella uli DSM 7084]
gi|301320216|gb|ADK68703.1| SSU ribosomal protein S3P [Olsenella uli DSM 7084]
Length = 236
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 101/222 (45%), Positives = 150/222 (67%), Gaps = 3/222 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+ P FRLG+ W SRW+A +Y L DL+IR +L+ L A ++++ IER
Sbjct: 1 MGQKVQPTGFRLGITEEWRSRWYADKKDYAKSLGNDLEIRRFLEKRLASAALSRVDIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPKPEINATLIA 117
++++Y+ARPG++IGKKG +I+ +R L + I++ V EV +PE++A L+A
Sbjct: 61 GDKVKVVIYTARPGIVIGKKGAEIDALRADLQKLAGVDKGNINVDVIEVKRPELDAQLVA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+SIA+QLE R+ FRRA+++A+QSA + GA G+++ SGRLNGAE+ R E EGRVPL T
Sbjct: 121 RSIAEQLEGRIAFRRAVRKAIQSARKAGAKGIRIQCSGRLNGAEMGRREWSREGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
LRA I +GTA A T G+CG+KV++ L +++ + PA E
Sbjct: 181 LRARIGFGTATARTTMGACGVKVWIYLGEKLPGQPAPNPALE 222
>gi|299820961|ref|ZP_07052850.1| 30S ribosomal protein S3 [Listeria grayi DSM 20601]
gi|299817982|gb|EFI85217.1| 30S ribosomal protein S3 [Listeria grayi DSM 20601]
Length = 218
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 92/219 (42%), Positives = 148/219 (67%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+G+ W+S+W+A +Y LHEDL+IR+++ L A V+++ IER
Sbjct: 1 MGQKVHPIGMRIGIIRDWDSKWYAE-KDYADFLHEDLRIRDHITKRLADASVSRVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK G+++E +RK L+++T +H+++ E+ + +++A L+A++I
Sbjct: 60 ANRVNITIHTAKPGMVIGKGGSEVEALRKNLNDLTGKRVHINIVEIKRADLDAKLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRA K+A+Q MR GA G+K SGRL GA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLEGRVSFRRAQKQAIQRTMRAGAKGIKTQVSGRLGGADIARAEHYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDY A+T YG G+KV++ + + + + +
Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPTKKNNVEGGK 218
>gi|169335635|ref|ZP_02862828.1| hypothetical protein ANASTE_02055 [Anaerofustis stercorihominis DSM
17244]
gi|169258373|gb|EDS72339.1| hypothetical protein ANASTE_02055 [Anaerofustis stercorihominis DSM
17244]
Length = 213
Score = 260 bits (664), Expect = 1e-67, Method: Composition-based stats.
Identities = 100/211 (47%), Positives = 148/211 (70%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+SRW+A+ ++G L ED IR+Y++ G+++I IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWSSRWYAKDKDFGDTLVEDYNIRKYIKTTQYNTGISRIEIERF 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +I +Y+ +PG IIGK G+ IE +RK+L MT +++++ EV + +A L+A++I
Sbjct: 61 GEKIKIFIYTGKPGKIIGKAGSGIEAVRKQLQKMTGKNVYINIIEVKNVDCDAQLVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERR+ FRRAMK+A+ A+R GA+G+K SGR+NGAE++RTE Y +G VPLQTLRA
Sbjct: 121 AQQLERRISFRRAMKQAIGRALRGGAEGIKTSVSGRVNGAEMARTEQYSDGNVPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYG A A+T YG G+KV+++ + +
Sbjct: 181 DIDYGFAEADTTYGKIGVKVWINKGEVLPTK 211
>gi|306966729|ref|ZP_07479390.1| ribosomal protein S3 [Mycobacterium tuberculosis SUMu009]
gi|308355583|gb|EFP44434.1| ribosomal protein S3 [Mycobacterium tuberculosis SUMu009]
Length = 277
Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats.
Identities = 101/215 (46%), Positives = 142/215 (66%), Gaps = 2/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG+ W SRW+A +Y + ED+ IR L L++AG+A + IERT
Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYAEYVKEDVAIRRLLSSGLERAGIADVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++GT+ ++IR L +T ++ L++ EV PE A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTGKQVQLNILEVKNPESQAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+ R+E Y EGRVPL TLR
Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMRRSEFYREGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
A IDYG A+T +G G+KV++ D V
Sbjct: 180 ADIDYGLYEAKTTFGRIGVKVWIYKGDIVGGKREL 214
>gi|268316414|ref|YP_003290133.1| 30S ribosomal protein S3 [Rhodothermus marinus DSM 4252]
gi|262333948|gb|ACY47745.1| ribosomal protein S3 [Rhodothermus marinus DSM 4252]
Length = 249
Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats.
Identities = 110/217 (50%), Positives = 160/217 (73%), Gaps = 1/217 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +PI FRLGV W S W+A + L ED +IR YLQ LK+AG+++++IERT
Sbjct: 1 MGQKTHPIGFRLGVIRGWFSSWYAE-KDLPEKLIEDEEIRRYLQARLKRAGLSRVVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + ++++RPG++IG+ G ++EK+R++L +T EI ++++E+ +PE++A+L+AQ+I
Sbjct: 60 PKRVILTLHTSRPGVVIGRGGQEVEKLREELQKLTGKEIQINISEIKRPELDASLVAQNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE RV FRRAMK+A+ +AMR GA G+++ SGRL GAE+SRTE YLEGRVPL TLRA
Sbjct: 120 AQQLEGRVSFRRAMKQAITAAMRMGAQGIRIKVSGRLGGAEMSRTEQYLEGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
+IDY A A T YG+ G+KV++ L + + D + A
Sbjct: 180 NIDYAQATAYTIYGTIGVKVWIFLGEIIGKPDLSPNA 216
>gi|291518039|emb|CBK73260.1| SSU ribosomal protein S3P [Butyrivibrio fibrisolvens 16/4]
Length = 220
Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats.
Identities = 96/220 (43%), Positives = 143/220 (65%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+S+W+A G + L ED IR++L+ L AGV+KI IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAEGENFSDYLVEDYNIRKFLKKKLYAAGVSKIEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ VY+A+PG++IGK G +I+KI+ +L T+ ++ + + E+ +P+ +A L+A++I
Sbjct: 61 AGRVKVTVYTAKPGVVIGKGGAEIDKIKTELQKQTSDKLVVDIKEIKRPDRDAQLVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE RV FRRAMK + AM+ G G+K SGRL GA+++R+E Y EG +PLQTLRA
Sbjct: 121 AGQLENRVSFRRAMKSCMGRAMKTGIKGIKTSCSGRLGGADMARSESYNEGTIPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
IDYG A A+T YG G+KV++ + + +
Sbjct: 181 DIDYGFAEADTTYGKVGVKVWIYKGEVLPSKKKNVEGGAE 220
>gi|291613242|ref|YP_003523399.1| ribosomal protein S3 [Sideroxydans lithotrophicus ES-1]
gi|291583354|gb|ADE11012.1| ribosomal protein S3 [Sideroxydans lithotrophicus ES-1]
Length = 238
Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats.
Identities = 119/230 (51%), Positives = 161/230 (70%), Gaps = 4/230 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+PI FRL V W S+W++ + LL +D+++R+YL+ L AGV+KI+IER
Sbjct: 1 MGQKIHPIGFRLSVQKNWTSKWYSNSKHFSELLLKDIEVRDYLKKKLAGAGVSKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119
KN +I +Y+ARPG++IGKKG DIE +R +L ++ L++ EV KPE++A LIA S
Sbjct: 61 AKNAKITIYTARPGVVIGKKGEDIESLRNELKKRMGLPDVGLNIEEVRKPEVDAQLIADS 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
I QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLR
Sbjct: 121 ITQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP---AAEHRVVEKD 226
A IDYGT+ A T YG G+KV+V D V+ A + V K
Sbjct: 181 ADIDYGTSEALTTYGLIGVKVWVYKGDHVAGQQEAAAPVVAEPEKKVRKS 230
>gi|271962638|ref|YP_003336834.1| 30S ribosomal protein S3P [Streptosporangium roseum DSM 43021]
gi|270505813|gb|ACZ84091.1| SSU ribosomal protein S3P [Streptosporangium roseum DSM 43021]
Length = 288
Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats.
Identities = 98/206 (47%), Positives = 146/206 (70%), Gaps = 1/206 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FRLG+ + SRW+A Y + + ED+ IR L+ +++AG++K+ IERT
Sbjct: 1 MGQKVNPHGFRLGITTDFKSRWYAD-KLYKSYVAEDVAIRRMLKKGMERAGISKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ +++ARPG++IG++G + ++IR L +T ++ L++ EV PEI+A L+AQ +
Sbjct: 60 TDRVQVDIHTARPGIVIGRRGAEADRIRGDLEKLTKKQVQLNILEVKNPEIDAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++A+QSAM+ GA G++V SGRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLSSRVSFRRAMRKAMQSAMKSGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRD 206
IDYG A T +G G+KV++ +
Sbjct: 180 DIDYGLYEARTTFGRIGVKVWIYKGE 205
>gi|116628592|ref|YP_821211.1| 30S ribosomal protein S3 [Streptococcus thermophilus LMD-9]
gi|122266814|sp|Q03IF7|RS3_STRTD RecName: Full=30S ribosomal protein S3
gi|116101869|gb|ABJ67015.1| SSU ribosomal protein S3P [Streptococcus thermophilus LMD-9]
gi|312279253|gb|ADQ63910.1| Methyltransferase small [Streptococcus thermophilus ND03]
Length = 217
Score = 259 bits (663), Expect = 1e-67, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 147/215 (68%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L A V+ I I R
Sbjct: 1 MGQKVHPIGLRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFIQKELADASVSTIEIVRA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G++++ +R +L+ +T ++H+++ E+ KP+++A L+ ++I
Sbjct: 60 VNKVIVSLHTAKPGMVIGKGGSNVDALRAQLNKLTGKQVHINIVEIKKPDLDAHLVGETI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE+RV FRRA K+A+Q AMR GA G+K SGRLNGA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLEQRVAFRRAQKQAIQRAMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDY A T YG G+KV++ + + +T
Sbjct: 180 DIDYAWEEAHTTYGKLGVKVWIYRGEVLPARKNTK 214
>gi|37912986|gb|AAR05315.1| ribosomal protein S3 [uncultured marine alpha proteobacterium
HOT2C01]
Length = 223
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 124/207 (59%), Positives = 155/207 (74%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RL +N W SRW+A E+G+ L EDLKIR YL+ LK VAKI IER
Sbjct: 1 MGQKVNPIGLRLILNKKWQSRWYAGKKEFGSFLQEDLKIRAYLEKKLKNCAVAKIQIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K ++ +YSARPGLIIGKKG+DIEK++KK+S T+ E+ +++ E+ KPE+ A LIA I
Sbjct: 61 AKKAQVTIYSARPGLIIGKKGSDIEKLKKKISEFTSDEVSINLVEIRKPEVEAQLIADGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLERRV FRRAMKR+VQSAMR GADG++V GRL G E++RTE Y EGRVPL T RA
Sbjct: 121 AEQLERRVSFRRAMKRSVQSAMRLGADGIRVNCGGRLGGTEIARTEWYREGRVPLHTFRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207
++DY A A+T YGSCGIKV++ D
Sbjct: 181 NVDYAVATAQTTYGSCGIKVWIYKGDI 207
>gi|319443059|ref|ZP_07992215.1| 30S ribosomal protein S3 [Corynebacterium variabile DSM 44702]
Length = 249
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 106/223 (47%), Positives = 149/223 (66%), Gaps = 2/223 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P RLG+ W SRW+A +Y L ED+KIRE+L L +AG+A ++IERT
Sbjct: 1 MGQKIHPHGLRLGITSEWRSRWYAD-KQYADYLAEDIKIREFLSKGLDRAGIADVVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV + NA L+AQSI
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGRLEKLTGKQVQLNILEVKNIDANAQLVAQSI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAM + G+KV+ SGRL GAE+ RTE Y EGRVPL TLR
Sbjct: 120 AEQLTNRVAFRRAMRKAIQSAMRQPQVKGIKVVCSGRLGGAEMGRTERYHEGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
A IDYGT A T +G G+KV++ D V ++ A
Sbjct: 180 AEIDYGTYEARTTFGRIGVKVWIYKGDVVGGRRESLLNARDER 222
>gi|260549834|ref|ZP_05824050.1| ribosomal protein S3 [Acinetobacter sp. RUH2624]
gi|293610830|ref|ZP_06693130.1| 30S ribosomal protein S3 [Acinetobacter sp. SH024]
gi|260407084|gb|EEX00561.1| ribosomal protein S3 [Acinetobacter sp. RUH2624]
gi|292827174|gb|EFF85539.1| 30S ribosomal protein S3 [Acinetobacter sp. SH024]
Length = 250
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 112/226 (49%), Positives = 158/226 (69%), Gaps = 2/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI RLGV N+ W+A +Y L +DL++RE+L LK A V+ ILIER
Sbjct: 1 MGQKVHPIGIRLGVVKRHNANWYANPKQYAEYLLKDLQVREFLTKKLKNAMVSNILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ + +ARPG++IGKKG DIEK++++L+++ +S+NE+ +P+++A L+A++I
Sbjct: 61 SGAAKVTISTARPGIVIGKKGEDIEKLQRELTSIMGVPAQVSINEIDRPDLDARLVAEAI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV+FRRAMKRAVQ+ MR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 ASQLEKRVMFRRAMKRAVQNTMRAGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-SDSTIPA-AEHRVVE 224
IDY T AET YG+ G+KV++ + + PA AE R +
Sbjct: 181 DIDYATMRAETTYGTIGVKVWIFRGEILGGMKQVMNPAPAEDRPAK 226
>gi|325267183|ref|ZP_08133850.1| 30S ribosomal protein S3 [Kingella denitrificans ATCC 33394]
gi|324981346|gb|EGC16991.1| 30S ribosomal protein S3 [Kingella denitrificans ATCC 33394]
Length = 233
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 110/226 (48%), Positives = 156/226 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P+ FRL VN W+S+WFA+ +E+ +L +D+ +R YL HL A V +++IER
Sbjct: 1 MGQKIHPVGFRLAVNKDWSSKWFAKSTEFATVLKQDIDVRTYLSKHLADASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ RI +++ARPG++IG+KG IE +++ L + +H+++ E+ KPE++A LIA I
Sbjct: 61 AKSARITIHTARPGVVIGQKGAGIEVLKRDLEKLLGVAVHVNIEEIRKPELDAQLIADGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+RV FRRAMKRA+Q+AMR GA GVK++ SGRLNGA+++R+E Y EGRVPL TLRA
Sbjct: 121 AQQLEKRVQFRRAMKRAMQNAMRAGAKGVKIMTSGRLNGADIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
+DY T+ A T YG G+KV+V + R K
Sbjct: 181 DVDYATSEALTTYGIIGLKVWVYKGEMGQVQAQPAERENRRNHRKG 226
>gi|312144241|ref|YP_003995687.1| ribosomal protein S3 [Halanaerobium sp. 'sapolanicus']
gi|311904892|gb|ADQ15333.1| ribosomal protein S3 [Halanaerobium sp. 'sapolanicus']
Length = 213
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 97/213 (45%), Positives = 152/213 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+++W+A +Y LL ED +IR +++ + +AG+++I+IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDAKWYADKQDYSKLLKEDQEIRNHVKEKMYEAGISRIVIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ V++ARPG++IG+ G+++E +R ++ +T + ++V EV PE+NA L+A++I
Sbjct: 61 ANRLKLDVHTARPGMVIGRGGSEVEALRNEVETLTGRTVQINVVEVEDPEMNAQLVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL RR+ FRRAMK+A+ AMR GA+G KV +SGRL GAE++R E Y +G VPL TLRA
Sbjct: 121 AAQLVRRISFRRAMKQALNRAMRMGAEGFKVQSSGRLGGAEMARREGYSQGSVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
IDYG A A+T YG+ G+KV+++ + + + D
Sbjct: 181 DIDYGFAEADTTYGTIGVKVWINKGEILPEIDE 213
>gi|294789229|ref|ZP_06754468.1| ribosomal protein S3 [Simonsiella muelleri ATCC 29453]
gi|294482970|gb|EFG30658.1| ribosomal protein S3 [Simonsiella muelleri ATCC 29453]
Length = 233
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 112/226 (49%), Positives = 163/226 (72%), Gaps = 1/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P+ FRL VN W+S+WFA+ +E+ A+L +D+ +REYL L A V +++IER
Sbjct: 1 MGQKIHPVGFRLAVNKDWSSKWFAKSTEFAAVLKQDIDVREYLSKRLANASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ RI +++ARPG++IG+KG DIE +++ L + +H+++ E+ KPE++A LIA I
Sbjct: 61 AKSARITIHTARPGVVIGQKGADIEVLKRDLEKLLGVAVHVNIEEIRKPELDAQLIADGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+RV FRRAMKRA+Q+AMR GA G+K++ SGRLNGA+++R+E Y EGRVPL TLRA
Sbjct: 121 AQQLEKRVQFRRAMKRAMQNAMRAGAKGIKIMTSGRLNGADIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
+DY T+ A T YG G+KV+V + E+ + E+R +
Sbjct: 181 DVDYATSEALTTYGIIGLKVWVY-KGEMGQVQAQPEQRENRRNNRK 225
>gi|289209323|ref|YP_003461389.1| ribosomal protein S3 [Thioalkalivibrio sp. K90mix]
gi|288944954|gb|ADC72653.1| ribosomal protein S3 [Thioalkalivibrio sp. K90mix]
Length = 226
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 110/212 (51%), Positives = 150/212 (70%), Gaps = 3/212 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG++ W++ W+A G E+G L+ D+K+RE+LQ L A V++I I R
Sbjct: 1 MGQKVHPTGIRLGISRPWSATWYADGREFGETLNNDIKLREFLQKKLAHASVSRISISRP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN---MTNSEIHLSVNEVPKPEINATLIA 117
K I + +ARPG++IGKKG DIEK+R+ ++ + + +++ EV KPEI A L+A
Sbjct: 61 AKAAHITIQTARPGIVIGKKGEDIEKLRQDVARETGLEKGTVKINIEEVRKPEIEAQLVA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ IAQQLERR++FRRAMKRAV +AMR GA G+KV SGRLNGAE++R+E Y EGRVPL T
Sbjct: 121 EGIAQQLERRIMFRRAMKRAVGNAMRLGAQGIKVHVSGRLNGAEIARSEWYREGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVS 209
LRA IDYG A A T YG G+KV++ +
Sbjct: 181 LRADIDYGFAEARTTYGIIGVKVWIFKGEVFG 212
>gi|15612703|ref|NP_241006.1| 30S ribosomal protein S3 [Bacillus halodurans C-125]
gi|7388207|sp|Q9Z9K8|RS3_BACHD RecName: Full=30S ribosomal protein S3
gi|4512410|dbj|BAA75277.1| rpsC homologue (identity of 87% to B. subtilis ) [Bacillus
halodurans]
gi|10172752|dbj|BAB03859.1| 30S ribosomal protein S3 [Bacillus halodurans C-125]
Length = 219
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 102/217 (47%), Positives = 149/217 (68%), Gaps = 1/217 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ R+GV W S+W+A +Y LLHED+KIREY++ LK A V+KI IER
Sbjct: 1 MGQKVNPVGLRVGVIRDWESKWYAE-KDYADLLHEDIKIREYIENRLKDASVSKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + +A+PG++IGK G+++E +RK L+ +T +H+++ EV + +++A L+A++I
Sbjct: 60 ANRVNITISTAKPGMVIGKGGSEVEALRKALNELTGKRVHINIFEVKQADLDAKLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRAMK+A+Q MR GA G+K SGRL GA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLENRISFRRAMKQAIQRTMRAGAQGIKTQVSGRLGGADIARAEHYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
IDYGTA A+T YG G+K+++ + +
Sbjct: 180 DIDYGTAEADTTYGKLGVKIWIYRGEVLPTKGKNKKE 216
>gi|158317785|ref|YP_001510293.1| 30S ribosomal protein S3 [Frankia sp. EAN1pec]
gi|226697714|sp|A8LC50|RS3_FRASN RecName: Full=30S ribosomal protein S3
gi|158113190|gb|ABW15387.1| ribosomal protein S3 [Frankia sp. EAN1pec]
Length = 325
Score = 259 bits (663), Expect = 2e-67, Method: Composition-based stats.
Identities = 101/218 (46%), Positives = 149/218 (68%), Gaps = 1/218 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FRLG+ + SRW+A +Y A + ED+KIR+ + +++AG++++ IERT
Sbjct: 1 MGQKVNPHGFRLGITSEFTSRWYAD-KQYKAYVGEDVKIRKMMSKGMERAGISRVDIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PEI+A L+AQ +
Sbjct: 60 QGRLRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPEIDAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++A+QSAM+ GA G++V SGRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLSSRVSFRRAMRKAMQSAMKSGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
IDYG A T +G G+KV++ D V
Sbjct: 180 DIDYGFYEARTNFGRIGVKVWIYKGDIVQSRAEREAQE 217
>gi|71065065|ref|YP_263792.1| 30S ribosomal protein S3 [Psychrobacter arcticus 273-4]
gi|91207834|sp|Q4FUF0|RS3_PSYA2 RecName: Full=30S ribosomal protein S3
gi|71038050|gb|AAZ18358.1| SSU ribosomal protein S3P [Psychrobacter arcticus 273-4]
Length = 242
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 106/224 (47%), Positives = 152/224 (67%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI RLGV N+ W+A +Y L D+++REYL+ L A ++KI+IER
Sbjct: 1 MGQKVHPIGIRLGVVKKHNANWYASPKQYSEYLINDIQVREYLRKKLDSAMISKIMIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I + +ARPG++IGKKG DIE+++K+L+ M +++ E+ P+++A L+A+ I
Sbjct: 61 TGAAKITIATARPGIVIGKKGEDIERLQKELTKMMGVPAQVNIEEITSPDLDAHLVAEGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ++MR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNSMRSGAKGIKVELSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
IDY + AET YG+ G+KV++ + + +S +
Sbjct: 181 DIDYSSVRAETTYGTIGVKVWIFRGEILDGMNSVYNPVKEEQTR 224
>gi|110833264|ref|YP_692123.1| 30S ribosomal protein S3 [Alcanivorax borkumensis SK2]
gi|254427789|ref|ZP_05041496.1| ribosomal protein S3 [Alcanivorax sp. DG881]
gi|123345807|sp|Q0VSJ7|RS3_ALCBS RecName: Full=30S ribosomal protein S3
gi|110646375|emb|CAL15851.1| 30S ribosomal protein S3 [Alcanivorax borkumensis SK2]
gi|196193958|gb|EDX88917.1| ribosomal protein S3 [Alcanivorax sp. DG881]
Length = 230
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 105/226 (46%), Positives = 153/226 (67%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ RLG+ NS W+A Y L DL++REYL LK A V++I IER
Sbjct: 1 MGQKVHPVGIRLGIVKEHNSLWYAGPKSYSDCLVTDLQVREYLFKRLKSASVSRIKIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+N RI + +ARPG++IGKKG D+E++R+ ++ +H+++ EV KP+++A L+ ++
Sbjct: 61 SENVRITIATARPGIVIGKKGEDVERLRRDVAAKMGVPVHINIEEVRKPDLDARLVGDNV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AM+ GA+G+++ SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 AGQLERRVMFRRAMKRAVQNAMKSGAEGIRIQLSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDY + AET YG+ G+KV++ + + + + K
Sbjct: 181 DIDYASVRAETTYGTIGVKVWIFRGEVLGGMEQVQEEQKQSKGAKK 226
>gi|288554731|ref|YP_003426666.1| 30S ribosomal protein S3 [Bacillus pseudofirmus OF4]
gi|288545891|gb|ADC49774.1| 30S ribosomal protein S3 [Bacillus pseudofirmus OF4]
Length = 219
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 103/211 (48%), Positives = 148/211 (70%), Gaps = 1/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP R+GV W S+W+A +Y LLHED+KIREY++ LK A V+K+ IER
Sbjct: 1 MGQKINPTGLRVGVIKDWESKWYAE-KDYADLLHEDIKIREYIEKRLKDASVSKVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ V +A+PG++IGK G+++E +RK L+ +T +H+++ EV + +++A L+A++I
Sbjct: 60 ANRVNVTVSTAKPGMVIGKGGSEVEALRKALNELTGKRVHINIFEVKQADLDAKLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRAMK+A+Q MR GA G+K SGRL GA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLENRISFRRAMKQAIQRTMRSGAKGIKTQVSGRLGGADIARAEHYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYGTA A+T YG GIK+++ + +
Sbjct: 180 DIDYGTAEADTTYGKLGIKIWIYRGEVLPTK 210
>gi|258406179|ref|YP_003198921.1| 30S ribosomal protein S3 [Desulfohalobium retbaense DSM 5692]
gi|257798406|gb|ACV69343.1| ribosomal protein S3 [Desulfohalobium retbaense DSM 5692]
Length = 213
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 105/211 (49%), Positives = 150/211 (71%), Gaps = 1/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG N W SRWF+R +Y ++ED +IR Y++ L AG++ + IER+
Sbjct: 1 MGQKVHPYGFRLGYNKNWLSRWFSR-KDYPQYVYEDRQIRNYVKSKLYHAGLSSLEIERS 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+I+++ARPG++IG+KG +IEK+R L + + VNE+ +PE NA L+A+++
Sbjct: 60 ASKLRLIIHTARPGIVIGRKGVEIEKLRNDLKKKFKRDFSIEVNEIRRPETNAQLVAENV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV FRRAMKR + A +FGA+G+K+ SGRL GA+++RTE + EGRVPLQTLRA
Sbjct: 120 AMQLERRVAFRRAMKRTISLARKFGAEGIKISCSGRLGGADIARTEWFREGRVPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
+DYG AVA T YG G+KV++ + + D
Sbjct: 180 DLDYGYAVARTTYGVIGVKVWIFRGEILDDE 210
>gi|323144970|ref|ZP_08079530.1| ribosomal protein S3 [Succinatimonas hippei YIT 12066]
gi|322415249|gb|EFY06023.1| ribosomal protein S3 [Succinatimonas hippei YIT 12066]
Length = 269
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 106/221 (47%), Positives = 154/221 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ ++S W+A + + A + D +R+YL LK V+KI+I+R
Sbjct: 1 MGQKVNPIGIRLGITKPYSSVWYASTANFPANIKSDSAVRKYLFEELKNDSVSKIVIDRP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RKK++ + ++++EV KP+++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKKIAEIAGVPAQVNISEVRKPDLDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMK+A+Q+AMR GA G+KV SGRL GAE++R+E EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKKAIQNAMRVGAKGIKVEVSGRLGGAEIARSEWLREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
IDY + A T YG G+KV++ + + + T E R
Sbjct: 181 DIDYAISEAVTTYGVIGVKVWIFKGEVLGNLPLTQEEPEDR 221
>gi|85374459|ref|YP_458521.1| 30S ribosomal protein S3 [Erythrobacter litoralis HTCC2594]
gi|123293711|sp|Q2N9B7|RS3_ERYLH RecName: Full=30S ribosomal protein S3
gi|84787542|gb|ABC63724.1| ribosomal protein S3 [Erythrobacter litoralis HTCC2594]
Length = 231
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 128/218 (58%), Positives = 162/218 (74%), Gaps = 1/218 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RL +N TW+SRW+A G+ Y LL ED++IR+Y+ QA ++K++IER
Sbjct: 1 MGQKSNPIGLRLQINRTWDSRWYAEGNAYAKLLAEDIEIRKYILETAAQAAISKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K CRI +Y+ARPG+IIGKKG DIEK+R+KLS MT SE+ L++ E+ KPEI+A L+AQ I
Sbjct: 61 AKLCRISIYAARPGVIIGKKGADIEKLRQKLSTMTESEVKLNIVEIRKPEIDAKLVAQGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL RRV FRRAMKRA+QSAMR GA+G+K++ GRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 ADQLIRRVAFRRAMKRAMQSAMRLGAEGIKIVCGGRLGGAEIARVEQYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
+IDY A A TAYG GIKV+V + E+ D T
Sbjct: 181 NIDYAEAEALTAYGIIGIKVWVF-KGEILGHDPTAQDR 217
>gi|19551752|ref|NP_599754.1| 30S ribosomal protein S3 [Corynebacterium glutamicum ATCC 13032]
gi|62389407|ref|YP_224809.1| 30S ribosomal protein S3 [Corynebacterium glutamicum ATCC 13032]
gi|145294665|ref|YP_001137486.1| 30S ribosomal protein S3 [Corynebacterium glutamicum R]
gi|27734499|sp|Q8NT01|RS3_CORGL RecName: Full=30S ribosomal protein S3
gi|152060858|sp|A4QBI7|RS3_CORGB RecName: Full=30S ribosomal protein S3
gi|21323279|dbj|BAB97907.1| Ribosomal protein S3 [Corynebacterium glutamicum ATCC 13032]
gi|41324741|emb|CAF19223.1| 30S RIBOSOMAL PROTEIN S3 [Corynebacterium glutamicum ATCC 13032]
gi|140844585|dbj|BAF53584.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 248
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 109/228 (47%), Positives = 152/228 (66%), Gaps = 3/228 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P RLG+ W S W+A Y + ED+KIRE+L L +AG+A ++IERT
Sbjct: 1 MGQKIHPHGLRLGITSDWKSHWYAD-KSYADYVAEDIKIREFLSKGLDRAGIADVVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR++L +T ++ L++ EV + NA L+AQSI
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRRELEKLTGKQVALNILEVKNVDANAKLVAQSI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAM + G+KV+ SGRL GAE+SRTE Y EGRVPL TLR
Sbjct: 120 AEQLTNRVAFRRAMRKAIQSAMRQPQVKGIKVVCSGRLGGAEMSRTERYHEGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSD-SDSTIPAAEHRVVEKD 226
A IDYGT A T +G G+KV++ D V +S I A R D
Sbjct: 180 AEIDYGTYEAHTTFGRIGVKVWIYKGDVVGGRRESEINAPAERRGRGD 227
>gi|25027084|ref|NP_737138.1| 30S ribosomal protein S3 [Corynebacterium efficiens YS-314]
gi|259506787|ref|ZP_05749687.1| 30S ribosomal protein S3 [Corynebacterium efficiens YS-314]
gi|27734492|sp|P59181|RS3_COREF RecName: Full=30S ribosomal protein S3
gi|23492364|dbj|BAC17338.1| putative 30S ribosomal protein S3 [Corynebacterium efficiens
YS-314]
gi|259165658|gb|EEW50212.1| 30S ribosomal protein S3 [Corynebacterium efficiens YS-314]
Length = 248
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 108/228 (47%), Positives = 152/228 (66%), Gaps = 3/228 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P RLG+ W S W+A Y + ED+KIR++L L +AG+A ++IERT
Sbjct: 1 MGQKIHPHGLRLGITSDWKSHWYAD-QSYADYVAEDIKIRDFLSKGLDRAGIADVVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR++L +T ++ L++ EV + NA L+AQSI
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRRELEKLTGKQVALNILEVKNIDANAQLVAQSI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAM + G+KV+ SGRL GAE+SRTE Y EGRVPL TLR
Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPQVKGIKVVCSGRLGGAEMSRTERYHEGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSD-SDSTIPAAEHRVVEKD 226
A IDYGT A T +G G+KV++ D V +S I A R D
Sbjct: 180 AEIDYGTYEAHTTFGRIGVKVWIYKGDVVGGRRESEINAPAERRGRGD 227
>gi|91763166|ref|ZP_01265130.1| 30S ribosomal protein S3 [Candidatus Pelagibacter ubique HTCC1002]
gi|91717579|gb|EAS84230.1| 30S ribosomal protein S3 [Candidatus Pelagibacter ubique HTCC1002]
Length = 226
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 111/226 (49%), Positives = 156/226 (69%), Gaps = 2/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ FRLGVN W+S W+A+ ++G L ED KIR Y++ ++ +GV+K++IERT
Sbjct: 1 MGQKVNPVGFRLGVNRGWDSVWYAKKKDFGNYLIEDFKIRAYIKKNVVNSGVSKVMIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
C + +Y++RPG +IGKKG+DI+KI+ LS TN+E+ L++ EV KPE NA L+A++I
Sbjct: 61 SNKCFVTIYTSRPGFVIGKKGSDIDKIKNNLSKFTNNEVTLNIKEVKKPETNAYLVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQL +R+ +RRAMKRA+QS +R GA G+KV SGRL G E++RTE EG +P TLRA
Sbjct: 121 AQQLVKRISYRRAMKRAMQSCLRLGAKGIKVSISGRLGGNEIARTEWLREGSIPSHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS--DSTIPAAEHRVVE 224
IDY A A T +G GIK+++ + + T A V E
Sbjct: 181 DIDYAEAEALTTFGIIGIKIWIYKGEVFAKEFSQETNKIAPKEVKE 226
>gi|205372063|ref|ZP_03224880.1| 30S ribosomal protein S3 [Bacillus coahuilensis m4-4]
Length = 218
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 98/219 (44%), Positives = 148/219 (67%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+G+ W S+W+A G +Y LLHEDLK+REY+ L A V+K+ IER
Sbjct: 1 MGQKVHPIGLRVGIIRDWESKWYA-GKDYADLLHEDLKVREYVAKRLSDASVSKVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK GT++E +RK L+ +T +H+++ E+ + +++A L+A++I
Sbjct: 60 ANRINISIHTAKPGMVIGKGGTEVEALRKALTELTKKRVHINIVEIKRADLDAKLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRA K+++Q AMR GA G+K SGRL GA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLENRVSFRRAQKQSIQRAMRAGAKGIKTQVSGRLGGADIARAESYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDY A+T YG G+KV++ + + + +
Sbjct: 180 DIDYAHEEADTTYGKLGVKVWIYRGEVLPTKRKSQEGGK 218
>gi|222150451|ref|YP_002559604.1| 30S ribosomal protein S3 [Macrococcus caseolyticus JCSC5402]
gi|222119573|dbj|BAH16908.1| 30S ribosomal protein S3 [Macrococcus caseolyticus JCSC5402]
Length = 217
Score = 259 bits (662), Expect = 2e-67, Method: Composition-based stats.
Identities = 101/214 (47%), Positives = 152/214 (71%), Gaps = 1/214 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI R+G+ W+++WFA ++ LLHEDLK+R+Y++ +LK A V+++ IER
Sbjct: 1 MGQKINPIGLRVGIIRDWDAKWFAE-KDFATLLHEDLKVRKYIEENLKDASVSRVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++ +PG++IGK G++IEK+R L+++T +H++V EV K +++A L+A++I
Sbjct: 60 ANRVNIAIHTGKPGMVIGKGGSEIEKLRNNLNSLTGKRVHINVVEVKKVDMDARLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRA K+A+Q AM+ GA G+K SGRL GA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLENRVSFRRAQKQAIQRAMKLGAKGIKTQVSGRLGGADIARAEQYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
IDY A A+T YG G+KV++ + + S+
Sbjct: 180 DIDYAHAEADTTYGKLGVKVWIYRGEVLPTKKSS 213
>gi|261854956|ref|YP_003262239.1| ribosomal protein S3 [Halothiobacillus neapolitanus c2]
gi|261835425|gb|ACX95192.1| ribosomal protein S3 [Halothiobacillus neapolitanus c2]
Length = 224
Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats.
Identities = 106/212 (50%), Positives = 156/212 (73%), Gaps = 3/212 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG++ W SRW+A + L++D++ R +++ LK+A V++I IER
Sbjct: 1 MGQKVHPVGFRLGISSDWTSRWYADSKLFPVQLNQDVRTRAFIKDKLKEASVSRIQIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117
++ + +++ARPG++IG+KG DIE++R +++ M + + LSV E+ KPE++A L+A
Sbjct: 61 ARSASVTIHTARPGIVIGRKGEDIERLRGEIAPMLGVDRNAVKLSVEEIRKPELDAQLVA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+SIAQQLERR++FRRAMKRAVQ++MR GA G+KV SGRL GAE++R E Y EGRVPL T
Sbjct: 121 ESIAQQLERRIMFRRAMKRAVQTSMRLGAGGIKVNVSGRLGGAEIARNEWYREGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVS 209
LRA IDYG A A+T YG G+KV++ +
Sbjct: 181 LRADIDYGFAEAQTTYGVIGVKVWIFKGEVFG 212
>gi|16801836|ref|NP_472104.1| 30S ribosomal protein S3 [Listeria innocua Clip11262]
gi|16804664|ref|NP_466149.1| 30S ribosomal protein S3 [Listeria monocytogenes EGD-e]
gi|46908798|ref|YP_015187.1| 30S ribosomal protein S3 [Listeria monocytogenes str. 4b F2365]
gi|116873992|ref|YP_850773.1| 30S ribosomal protein S3 [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|217966175|ref|YP_002351853.1| ribosomal protein S3 [Listeria monocytogenes HCC23]
gi|224499299|ref|ZP_03667648.1| 30S ribosomal protein S3 [Listeria monocytogenes Finland 1988]
gi|224503580|ref|ZP_03671887.1| 30S ribosomal protein S3 [Listeria monocytogenes FSL R2-561]
gi|226225171|ref|YP_002759278.1| ribosomal protein S3 [Listeria monocytogenes Clip81459]
gi|254825013|ref|ZP_05230014.1| ribosomal protein S3 [Listeria monocytogenes FSL J1-194]
gi|254829075|ref|ZP_05233762.1| ribosomal protein S3 [Listeria monocytogenes FSL N3-165]
gi|254830942|ref|ZP_05235597.1| 30S ribosomal protein S3 [Listeria monocytogenes 10403S]
gi|254854168|ref|ZP_05243516.1| ribosomal protein S3 [Listeria monocytogenes FSL R2-503]
gi|254899923|ref|ZP_05259847.1| 30S ribosomal protein S3 [Listeria monocytogenes J0161]
gi|254912871|ref|ZP_05262883.1| 30S ribosomal protein S3 [Listeria monocytogenes J2818]
gi|254931104|ref|ZP_05264463.1| ribosomal protein S3 [Listeria monocytogenes HPB2262]
gi|254937251|ref|ZP_05268948.1| ribosomal protein S3 [Listeria monocytogenes F6900]
gi|254991848|ref|ZP_05274038.1| 30S ribosomal protein S3 [Listeria monocytogenes FSL J2-064]
gi|255026653|ref|ZP_05298639.1| 30S ribosomal protein S3 [Listeria monocytogenes FSL J2-003]
gi|255028281|ref|ZP_05300232.1| 30S ribosomal protein S3 [Listeria monocytogenes LO28]
gi|255519646|ref|ZP_05386883.1| 30S ribosomal protein S3 [Listeria monocytogenes FSL J1-175]
gi|284800488|ref|YP_003412353.1| 30S ribosomal protein S3 [Listeria monocytogenes 08-5578]
gi|284993674|ref|YP_003415442.1| 30S ribosomal protein S3 [Listeria monocytogenes 08-5923]
gi|289435892|ref|YP_003465764.1| hypothetical protein lse_2531 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|290891811|ref|ZP_06554808.1| rpsC protein [Listeria monocytogenes FSL J2-071]
gi|300763623|ref|ZP_07073621.1| ribosomal protein S3 [Listeria monocytogenes FSL N1-017]
gi|315304945|ref|ZP_07875040.1| ribosomal protein S3 [Listeria ivanovii FSL F6-596]
gi|54039501|sp|P66549|RS3_LISIN RecName: Full=30S ribosomal protein S3
gi|54041958|sp|P66548|RS3_LISMO RecName: Full=30S ribosomal protein S3
gi|61215603|sp|Q71WF2|RS3_LISMF RecName: Full=30S ribosomal protein S3
gi|123458737|sp|A0ALW2|RS3_LISW6 RecName: Full=30S ribosomal protein S3
gi|16412114|emb|CAD00704.1| ribosomal protein S3 [Listeria monocytogenes EGD-e]
gi|16415311|emb|CAC98001.1| ribosomal protein S3 [Listeria innocua Clip11262]
gi|46882071|gb|AAT05364.1| ribosomal protein S3 [Listeria monocytogenes serotype 4b str.
F2365]
gi|116742870|emb|CAK21994.1| ribosomal protein S3 [Listeria welshimeri serovar 6b str. SLCC5334]
gi|217335445|gb|ACK41239.1| ribosomal protein S3 [Listeria monocytogenes HCC23]
gi|225877633|emb|CAS06347.1| ribosomal protein S3 [Listeria monocytogenes serotype 4b str. CLIP
80459]
gi|258601485|gb|EEW14810.1| ribosomal protein S3 [Listeria monocytogenes FSL N3-165]
gi|258607560|gb|EEW20168.1| ribosomal protein S3 [Listeria monocytogenes FSL R2-503]
gi|258609857|gb|EEW22465.1| ribosomal protein S3 [Listeria monocytogenes F6900]
gi|284056050|gb|ADB66991.1| 30S ribosomal protein S3 [Listeria monocytogenes 08-5578]
gi|284059141|gb|ADB70080.1| 30S ribosomal protein S3 [Listeria monocytogenes 08-5923]
gi|289172136|emb|CBH28682.1| rpsC [Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|290558405|gb|EFD91922.1| rpsC protein [Listeria monocytogenes FSL J2-071]
gi|293582651|gb|EFF94683.1| ribosomal protein S3 [Listeria monocytogenes HPB2262]
gi|293590870|gb|EFF99204.1| 30S ribosomal protein S3 [Listeria monocytogenes J2818]
gi|293594254|gb|EFG02015.1| ribosomal protein S3 [Listeria monocytogenes FSL J1-194]
gi|300515900|gb|EFK42949.1| ribosomal protein S3 [Listeria monocytogenes FSL N1-017]
gi|307572215|emb|CAR85394.1| rpsC [Listeria monocytogenes L99]
gi|313626687|gb|EFR95725.1| ribosomal protein S3 [Listeria ivanovii FSL F6-596]
gi|313636116|gb|EFS01988.1| ribosomal protein S3 [Listeria seeligeri FSL S4-171]
gi|328468111|gb|EGF39117.1| 30S ribosomal protein S3 [Listeria monocytogenes 1816]
gi|328469799|gb|EGF40716.1| 30S ribosomal protein S3 [Listeria monocytogenes 220]
Length = 218
Score = 259 bits (661), Expect = 2e-67, Method: Composition-based stats.
Identities = 94/219 (42%), Positives = 147/219 (67%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+GV W+S+W+A +Y LHEDL+IR+Y+ L A V+++ IER
Sbjct: 1 MGQKVHPIGMRIGVIRDWDSKWYAE-KDYADFLHEDLRIRDYVAKRLSDASVSRVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK G+++E +RK L+ +T +H+++ E+ + +++A L+A++I
Sbjct: 60 ANRVNITIHTAKPGMVIGKGGSEVEALRKNLNELTQKRVHINIVEIKRADLDAKLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRA K+A+Q MR GA G+K SGRL GA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLEGRVSFRRAQKQAIQRTMRAGAKGIKTQVSGRLGGADIARAEHYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDY A+T YG G+KV++ + + + + +
Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPTKKNNVEGGK 218
>gi|302523999|ref|ZP_07276341.1| ribosomal protein S3 [Streptomyces sp. AA4]
gi|302432894|gb|EFL04710.1| ribosomal protein S3 [Streptomyces sp. AA4]
Length = 281
Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 96/211 (45%), Positives = 142/211 (67%), Gaps = 2/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG+ W SRW+A +Y + ED+KIR+ L +++AG++K+ IERT
Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYAEYVAEDVKIRKLLSTGMERAGISKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PE +A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGALEKLTKKQVQLNILEVKNPEADAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQ-SAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+Q S G++V GRL GAE+SR+E Y +GRVPL TLR
Sbjct: 120 AEQLSNRVAFRRAMRKAIQTSMRSPQVKGIRVQCGGRLGGAEMSRSEHYRDGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210
A IDYG A+T +G G+KV++ + V
Sbjct: 180 ADIDYGFFEAKTTFGRIGVKVWIYKGELVGG 210
>gi|93005320|ref|YP_579757.1| 30S ribosomal protein S3 [Psychrobacter cryohalolentis K5]
gi|123264740|sp|Q1QDI0|RS3_PSYCK RecName: Full=30S ribosomal protein S3
gi|92392998|gb|ABE74273.1| SSU ribosomal protein S3P [Psychrobacter cryohalolentis K5]
Length = 242
Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 105/224 (46%), Positives = 152/224 (67%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI RLGV N+ W+A +Y L D+++REYL+ L A ++KI+IER
Sbjct: 1 MGQKVHPIGIRLGVVKKHNANWYASPKQYSEYLINDIQVREYLRKKLDSAMISKIMIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I + +ARPG++IGKKG DIE+++K+L+ + +++ E+ P+++A L+A+ I
Sbjct: 61 TGAAKITIATARPGIVIGKKGEDIERLQKELTKIMGVPAQVNIEEITSPDLDAHLVAEGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ++MR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNSMRSGAKGIKVELSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
IDY + AET YG+ G+KV++ + + +S +
Sbjct: 181 DIDYSSVRAETTYGTIGVKVWIFRGEILDGMNSVYNPVKEEQTR 224
>gi|303230141|ref|ZP_07316910.1| ribosomal protein S3 [Veillonella atypica ACS-134-V-Col7a]
gi|303231249|ref|ZP_07317987.1| ribosomal protein S3 [Veillonella atypica ACS-049-V-Sch6]
gi|302514156|gb|EFL56160.1| ribosomal protein S3 [Veillonella atypica ACS-049-V-Sch6]
gi|302515202|gb|EFL57175.1| ribosomal protein S3 [Veillonella atypica ACS-134-V-Col7a]
Length = 221
Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 98/219 (44%), Positives = 156/219 (71%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+G+ W+++W+A ++ A LHED+KIR +L+ L AG+++I IERT
Sbjct: 1 MGQKVNPHGLRVGIVKDWDAKWYAE-KDFAANLHEDVKIRNFLKETLFIAGISRIEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+K ++ +++A+PG++IG+ G IE I+K ++ T+ ++ +++ E+ + +++A L+A++I
Sbjct: 60 NKRIKLTIHTAKPGMVIGRGGAGIEDIKKAMTRFTDKQVDVNIAEIKQADMDAVLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR+ FRRAMK+AV MR GA G+K++ SGRL GAE++R+E Y EG +PL TLRA
Sbjct: 120 AGQLERRIGFRRAMKQAVGRTMRLGAKGIKIMVSGRLGGAEIARSESYREGSIPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
+IDYGTA A T YG GIKV++ + + ++ E
Sbjct: 180 NIDYGTAEAHTTYGCIGIKVWIYKGEVLPEAKQPAKKEE 218
>gi|226305347|ref|YP_002765305.1| 30S ribosomal protein S3 [Rhodococcus erythropolis PR4]
gi|229489648|ref|ZP_04383511.1| ribosomal protein S3 [Rhodococcus erythropolis SK121]
gi|259495255|sp|C0ZW31|RS3_RHOE4 RecName: Full=30S ribosomal protein S3
gi|226184462|dbj|BAH32566.1| 30S ribosomal protein S3 [Rhodococcus erythropolis PR4]
gi|229323745|gb|EEN89503.1| ribosomal protein S3 [Rhodococcus erythropolis SK121]
Length = 268
Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 100/217 (46%), Positives = 144/217 (66%), Gaps = 2/217 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG+ W SRW+A +Y + ED+ IR+ L +++AG+AK+ IERT
Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYAEYVKEDVAIRKLLATGMERAGIAKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV E A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRSELEKLTGKQVQLNILEVKNAEAEAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR
Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
A IDYG A+T +G G+KV++ D V
Sbjct: 180 ADIDYGLYEAKTTFGRIGVKVWIYKGDIVGGKRELAA 216
>gi|309812338|ref|ZP_07706093.1| ribosomal protein S3 [Dermacoccus sp. Ellin185]
gi|308433643|gb|EFP57520.1| ribosomal protein S3 [Dermacoccus sp. Ellin185]
Length = 275
Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 104/234 (44%), Positives = 150/234 (64%), Gaps = 8/234 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQKINP FRLG+ SRWFA G Y + ED+ IR+ L +++AG+A++
Sbjct: 1 MGQKINPNGFRLGITTEHKSRWFADSTKPGQRYSDYVKEDVAIRKLLSEGMERAGIARVD 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + +++R +L +T ++ L++ EV PE +A L+
Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRLRSRLEKLTGKQVQLNILEVKNPEADAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ IA+QL RV FRRAM++ + SA R GA G++V SGRL GAE+SR+E Y EGRVPL
Sbjct: 121 AQGIAEQLSARVSFRRAMRKGIMSAQRAGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRD----EVSDSDSTIPAAEHRVVEKD 226
TLRA+IDYG A T +G G+KV++ D E++ + P R D
Sbjct: 181 TLRANIDYGFYEARTTFGRIGVKVWIYKGDLTAKELAREQAAAPQRPARGRRND 234
>gi|84494780|ref|ZP_00993899.1| 30S ribosomal protein S3 [Janibacter sp. HTCC2649]
gi|84384273|gb|EAQ00153.1| 30S ribosomal protein S3 [Janibacter sp. HTCC2649]
Length = 272
Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 101/228 (44%), Positives = 147/228 (64%), Gaps = 4/228 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQK+NP FRLG+ SRWFA G Y + ED+ IR+ + +++AG++K+
Sbjct: 1 MGQKVNPHGFRLGITSEHRSRWFADSTKEGQRYRDYVKEDVAIRKLMSEGMERAGISKVE 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV PE +A L+
Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQVQLNILEVKNPETDAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ +A+QL RV FRRAM++++QSA R GA G++V SGRL GAE+SRTE Y EGRVPL
Sbjct: 121 AQGVAEQLSARVSFRRAMRKSMQSATRAGAKGIRVQVSGRLGGAEMSRTEFYREGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
TLRA ID G A T +G G+KV++ D + + A R
Sbjct: 181 TLRAQIDVGFYEARTTFGRIGVKVWIYKGDVTARELAAQQATAPRQGR 228
>gi|226323016|ref|ZP_03798534.1| hypothetical protein COPCOM_00788 [Coprococcus comes ATCC 27758]
gi|225208583|gb|EEG90937.1| hypothetical protein COPCOM_00788 [Coprococcus comes ATCC 27758]
Length = 218
Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 102/211 (48%), Positives = 147/211 (69%), Gaps = 1/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+S+W+A ++ L ED KIR++L+ L AGV+KI IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAE-KDFADYLVEDHKIRKFLKNKLYSAGVSKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+IIVY+A+PG++IGK G++IEK++ +L MT+ ++ + + EV +P+ +A L+A++I
Sbjct: 60 SDRVKIIVYTAKPGVVIGKGGSEIEKVKAELQKMTDKKVIVDIKEVKRPDKDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE R+ FRRAMK + M+ GA GVK SGRL GA+++RTE Y EG +PLQTLRA
Sbjct: 120 AQQLENRISFRRAMKSCMSRTMKSGALGVKTSVSGRLGGADMARTEFYSEGTIPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYG A A+T YG G+KV++ + +
Sbjct: 180 DIDYGFAEADTTYGKVGVKVWIYKGEVLPTK 210
>gi|149184317|ref|ZP_01862635.1| 30S ribosomal protein S3 [Erythrobacter sp. SD-21]
gi|148831637|gb|EDL50070.1| 30S ribosomal protein S3 [Erythrobacter sp. SD-21]
Length = 231
Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 128/226 (56%), Positives = 166/226 (73%), Gaps = 4/226 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K NPI RL +N TW+SRW+A G +Y LL ED++IR+Y+ QA ++K++IER
Sbjct: 1 MGHKSNPIGLRLQINRTWDSRWYAEGRDYAKLLAEDIEIRKYILEKAAQAAISKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K CRI +Y+ARPG+IIGKKG DIEK+R KLS MT SE+ L++ E+ KPE++A L+AQ I
Sbjct: 61 AKLCRISIYAARPGVIIGKKGADIEKLRAKLSQMTESEVKLNIVEIRKPEVDAKLVAQGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL RRV FRRAMKRA+QSAMR GA+G+K++ GRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 ADQLIRRVAFRRAMKRAMQSAMRLGAEGIKIMCGGRLGGAEIARVEQYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
+IDY A A TAYG GIKV+V + E+ D P A+ R++ +
Sbjct: 181 NIDYAEAEALTAYGIIGIKVWVF-KGEILGHD---PTAQDRLMMES 222
>gi|305679831|ref|ZP_07402641.1| ribosomal protein S3 [Corynebacterium matruchotii ATCC 14266]
gi|305660451|gb|EFM49948.1| ribosomal protein S3 [Corynebacterium matruchotii ATCC 14266]
Length = 248
Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 110/228 (48%), Positives = 154/228 (67%), Gaps = 3/228 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P RLG+ W S WFA EY L ED+KIR+YL +L +AG+A ++IERT
Sbjct: 1 MGQKIHPHGLRLGITSDWKSHWFAD-KEYADYLAEDIKIRDYLTKNLDRAGIADVVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
RI +++ARPG++IG++G++ +++R KL +T ++ L++ EV + NA L+AQSI
Sbjct: 60 RDRVRIDIHTARPGIVIGRRGSEADRLRTKLEKLTRKQVALNILEVKNIDANAQLVAQSI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+Q AM + G+KV+ +GRL GAE+SRTE Y EGRVPL TLR
Sbjct: 120 AEQLTNRVAFRRAMRKAIQGAMRQPQVKGIKVMCAGRLGGAEMSRTERYHEGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSD-SDSTIPAAEHRVVEKD 226
A IDYGT A T +G G+KV++ D V + +S + A R D
Sbjct: 180 AEIDYGTYEAHTTFGRIGVKVWIYKGDVVGNRRESELNAPTERRGRGD 227
>gi|68536917|ref|YP_251622.1| 30S ribosomal protein S3 [Corynebacterium jeikeium K411]
gi|260579261|ref|ZP_05847145.1| 30S ribosomal protein S3 [Corynebacterium jeikeium ATCC 43734]
gi|91207649|sp|Q4JT53|RS3_CORJK RecName: Full=30S ribosomal protein S3
gi|68264516|emb|CAI38004.1| 30S ribosomal protein S3 [Corynebacterium jeikeium K411]
gi|258602613|gb|EEW15906.1| 30S ribosomal protein S3 [Corynebacterium jeikeium ATCC 43734]
Length = 247
Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 105/221 (47%), Positives = 150/221 (67%), Gaps = 2/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P RLG+ W SRW+A +Y L ED+KIR++L L +AG+A ++IERT
Sbjct: 1 MGQKIHPHGLRLGITSEWRSRWYAD-KQYADYLAEDIKIRDFLSEGLDRAGIANVVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
H R+ +++ARPG++IG++G++ ++IR +L +T ++ L++ EV + NA L+AQSI
Sbjct: 60 HDRVRVDIHTARPGIVIGRRGSEADRIRGQLEKLTGKQVQLNILEVKNIDANAQLVAQSI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+Q AM + G+KV+ SGRL GAE+ RTE Y EGRVPL TLR
Sbjct: 120 AEQLTNRVAFRRAMRKAIQGAMRQPQVKGIKVVCSGRLGGAEMGRTERYHEGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
A IDYGT A T +G G+KV++ D V ++ A
Sbjct: 180 AEIDYGTYEAHTTFGRIGVKVWIYKGDVVGGRRESLMNARD 220
>gi|156973057|ref|YP_001443964.1| 30S ribosomal protein S3 [Vibrio harveyi ATCC BAA-1116]
gi|269959697|ref|ZP_06174077.1| 30S ribosomal protein S3 [Vibrio harveyi 1DA3]
gi|171769917|sp|A7N0I3|RS3_VIBHB RecName: Full=30S ribosomal protein S3
gi|156524651|gb|ABU69737.1| hypothetical protein VIBHAR_00736 [Vibrio harveyi ATCC BAA-1116]
gi|269835620|gb|EEZ89699.1| 30S ribosomal protein S3 [Vibrio harveyi 1DA3]
Length = 232
Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats.
Identities = 107/224 (47%), Positives = 153/224 (68%), Gaps = 1/224 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WN+ WFA ++ L D K+R++L L++A +++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNATWFANTKDFADNLDGDFKVRQFLTKELQKASLSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+ SI
Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDAQLVGDSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
IDY T+ A T YG GIK ++ + E+ A E + +
Sbjct: 181 DIDYATSSAHTQYGVIGIKTWIF-KGEILGGMPAANAVEPKGDK 223
>gi|146317737|ref|YP_001197449.1| 30S ribosomal protein S3 [Streptococcus suis 05ZYH33]
gi|146319927|ref|YP_001199638.1| 30S ribosomal protein S3 [Streptococcus suis 98HAH33]
gi|223933100|ref|ZP_03625093.1| ribosomal protein S3 [Streptococcus suis 89/1591]
gi|253750993|ref|YP_003024134.1| 30S ribosomal protein S3 [Streptococcus suis SC84]
gi|253752893|ref|YP_003026033.1| 30S ribosomal protein S3 [Streptococcus suis P1/7]
gi|253754718|ref|YP_003027858.1| 30S ribosomal protein S3 [Streptococcus suis BM407]
gi|302023168|ref|ZP_07248379.1| 30S ribosomal protein S3 [Streptococcus suis 05HAS68]
gi|330831926|ref|YP_004400751.1| 30S ribosomal protein S3 [Streptococcus suis ST3]
gi|152060909|sp|A4VYP9|RS3_STRS2 RecName: Full=30S ribosomal protein S3
gi|152060911|sp|A4VSG0|RS3_STRSY RecName: Full=30S ribosomal protein S3
gi|145688543|gb|ABP89049.1| ribosomal protein S3 [Streptococcus suis 05ZYH33]
gi|145690733|gb|ABP91238.1| ribosomal protein S3 [Streptococcus suis 98HAH33]
gi|223898287|gb|EEF64655.1| ribosomal protein S3 [Streptococcus suis 89/1591]
gi|251815282|emb|CAZ50848.1| 30S ribosomal protein S3 [Streptococcus suis SC84]
gi|251817182|emb|CAZ54904.1| 30S ribosomal protein S3 [Streptococcus suis BM407]
gi|251819138|emb|CAR44234.1| 30S ribosomal protein S3 [Streptococcus suis P1/7]
gi|292557537|gb|ADE30538.1| ribosomal protein S3 [Streptococcus suis GZ1]
gi|319757247|gb|ADV69189.1| 30S ribosomal protein S3 [Streptococcus suis JS14]
gi|329306149|gb|AEB80565.1| 30S ribosomal protein S3 [Streptococcus suis ST3]
Length = 217
Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 146/215 (67%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+G+ W+++W+A EY LHEDL IR +++ L A + I IER
Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRNFIKKELADASTSTIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G++++ +R +L+ +T ++H+++ E+ +P+++A L+ +SI
Sbjct: 60 VNKVIVSIHTAKPGMVIGKAGSNVDALRAQLNKLTGKQVHINIIEIKQPDLDAHLVGESI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE+RV FRRA K+A+Q AMR GA G+K SGRLNGA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLEQRVAFRRAQKQAIQRAMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDY A T YG G+KV++ + + +T
Sbjct: 180 DIDYAWEEALTTYGKLGVKVWIYRGEVLPARKNTK 214
>gi|154498889|ref|ZP_02037267.1| hypothetical protein BACCAP_02881 [Bacteroides capillosus ATCC
29799]
gi|150271729|gb|EDM98955.1| hypothetical protein BACCAP_02881 [Bacteroides capillosus ATCC
29799]
Length = 283
Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats.
Identities = 110/216 (50%), Positives = 147/216 (68%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+SRW+AR + G LL ED KIR++L+ AG+ KI IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWYARNEKVGDLLVEDKKIRDFLKKTQYGAGIPKIEIERD 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ RI ++ ARPG++IGK G IE +R +L M + L++ EV P+++A LIA++I
Sbjct: 61 NAKVRIYLHCARPGVVIGKGGEAIEALRLQLEKMLGKSVALNIVEVKNPDMDAQLIAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+R+ FRRAMK A+ AMR GA G+K SGRL GAE++RTE Y +G +PLQTLRA
Sbjct: 121 AQQLEKRIGFRRAMKNAMGRAMRMGARGIKTQVSGRLGGAEIARTEHYHDGTIPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
IDYG A A T YG G+KV+V + +S + T P
Sbjct: 181 DIDYGFAEAATTYGRIGVKVWVYKGEILSQALRTTP 216
>gi|288904279|ref|YP_003429500.1| ribosomal protein S3 [Streptococcus gallolyticus UCN34]
gi|306830308|ref|ZP_07463479.1| 30S ribosomal protein S3 [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|325977258|ref|YP_004286974.1| 30S ribosomal protein S3 [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|288731004|emb|CBI12548.1| ribosomal protein S3 [Streptococcus gallolyticus UCN34]
gi|304427555|gb|EFM30656.1| 30S ribosomal protein S3 [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|325177186|emb|CBZ47230.1| 30S ribosomal protein S3 [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 217
Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 149/215 (69%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L A V++I IER
Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFIQTELADASVSRIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G +++ +R KL+ +T ++H+++ E+ +P+++A L+ ++I
Sbjct: 60 VNKVIVSLHTAKPGMVIGKGGANVDALRAKLNKLTGKQVHINIVEIKQPDLDAHLVGENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE+RV FRRA K+A+Q MR GA G+K SGRLNGA+++R+E Y EG VPL TLRA
Sbjct: 120 ARQLEQRVAFRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARSEGYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDY A+T YG G+KV++ + + +T
Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTK 214
>gi|283796553|ref|ZP_06345706.1| ribosomal protein S3 [Clostridium sp. M62/1]
gi|291075967|gb|EFE13331.1| ribosomal protein S3 [Clostridium sp. M62/1]
gi|295092553|emb|CBK78660.1| SSU ribosomal protein S3P [Clostridium cf. saccharolyticum K10]
Length = 218
Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats.
Identities = 98/209 (46%), Positives = 148/209 (70%), Gaps = 1/209 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+SRW+A +++ L ED KIR YL+ L AGV+KI IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWYAE-ADFADNLVEDHKIRTYLKKKLYSAGVSKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++I+Y+A+PG++IG+ G++IEK++ ++ +T+ ++ + + EV +P+ +A L+A++I
Sbjct: 60 SDRVKVIIYTAKPGVVIGRGGSEIEKVKAEVQKLTDKKLFIDIKEVKRPDRDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE RV FRRAMK A+ +M+ G G+K +GRL GA+++RTE Y EG +PLQTLRA
Sbjct: 120 AQQLENRVSFRRAMKSAMGRSMKAGVKGIKAAVAGRLGGADMARTEFYSEGTIPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVS 209
IDYG A A+T YG G+KV++ + +
Sbjct: 180 DIDYGFAEADTTYGKLGVKVWIYKGEVLP 208
>gi|55821899|ref|YP_140341.1| 30S ribosomal protein S3 [Streptococcus thermophilus LMG 18311]
gi|55823815|ref|YP_142256.1| 30S ribosomal protein S3 [Streptococcus thermophilus CNRZ1066]
gi|81676492|sp|Q5LXR7|RS3_STRT1 RecName: Full=30S ribosomal protein S3
gi|81676645|sp|Q5M2B9|RS3_STRT2 RecName: Full=30S ribosomal protein S3
gi|55737884|gb|AAV61526.1| 30S ribosomal protein S3 [Streptococcus thermophilus LMG 18311]
gi|55739800|gb|AAV63441.1| 30S ribosomal protein S3 [Streptococcus thermophilus CNRZ1066]
Length = 217
Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 148/215 (68%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L A V+ I I R
Sbjct: 1 MGQKVHPIGLRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFIQKELADASVSTIEIVRA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G++++ +R +L+ +T ++H+++ E+ KP+++A L+ ++I
Sbjct: 60 VNKVIVSLHTAKPGMVIGKGGSNVDALRAQLNKLTGKQVHINIVEIKKPDLDAHLVGETI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE+RV FRRA K+A+Q AMR GA G+K SGRLNGA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLEQRVAFRRAQKQAIQRAMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDY A+T YG G+KV++ + + +T
Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTK 214
>gi|229821617|ref|YP_002883143.1| ribosomal protein S3 [Beutenbergia cavernae DSM 12333]
gi|259495237|sp|C5C0I5|RS3_BEUC1 RecName: Full=30S ribosomal protein S3
gi|229567530|gb|ACQ81381.1| ribosomal protein S3 [Beutenbergia cavernae DSM 12333]
Length = 258
Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats.
Identities = 102/231 (44%), Positives = 151/231 (65%), Gaps = 4/231 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQK+NP+ FRLG+ SRWFA G Y + ED++IR+ + L++AG++K+
Sbjct: 1 MGQKVNPLGFRLGITTDHRSRWFADSTKPGQRYRDYVREDVQIRKLMSTGLERAGISKVE 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + +++R +L +T ++ L++ EV PE++A L+
Sbjct: 61 IERTRDRVRVDLHTARPGIVIGRRGAEADRLRSELEKLTGKQVQLNILEVKNPELDAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ IA+QL RV FRRAM++ +QSA R GA GV+V SGRL GAE+SR+E Y EGRVPL
Sbjct: 121 AQGIAEQLASRVAFRRAMRKGMQSAQRAGAKGVRVQCSGRLGGAEMSRSEFYREGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
TLRA+IDYG A T +G G+KV++ D + A+ +
Sbjct: 181 TLRANIDYGFFEARTTFGRIGVKVWIYKGDMTEREFAREQASAAPRARGRA 231
>gi|299768672|ref|YP_003730698.1| 30S ribosomal protein S3 [Acinetobacter sp. DR1]
gi|298698760|gb|ADI89325.1| 30S ribosomal protein S3 [Acinetobacter sp. DR1]
Length = 250
Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats.
Identities = 111/226 (49%), Positives = 158/226 (69%), Gaps = 2/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI RLGV N+ W+A +Y L +DL++RE+L LK A ++ ILIER
Sbjct: 1 MGQKVHPIGIRLGVVKRHNANWYASPKQYAEYLLKDLQVREFLTKKLKNAMISNILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ + +ARPG++IGKKG DIEK++++L+++ +S+NE+ +P+++A L+A++I
Sbjct: 61 SGAAKVTISTARPGIVIGKKGEDIEKLQRELTSIMGVPAQVSINEIDRPDLDARLVAEAI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV+FRRAMKRAVQ+ MR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 ASQLEKRVMFRRAMKRAVQNTMRAGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-SDSTIPA-AEHRVVE 224
IDY T AET YG+ G+KV++ + + PA AE R +
Sbjct: 181 DIDYATMRAETTYGTIGVKVWIFRGEILGGMKQVMNPAPAEDRPAK 226
>gi|295394342|ref|ZP_06804567.1| 30S ribosomal protein S3 [Brevibacterium mcbrellneri ATCC 49030]
gi|294972800|gb|EFG48650.1| 30S ribosomal protein S3 [Brevibacterium mcbrellneri ATCC 49030]
Length = 264
Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats.
Identities = 104/225 (46%), Positives = 156/225 (69%), Gaps = 8/225 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE----YGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQKINP FRLG+ S+WF ++ Y + ED++IRE LQ +L++AG++++
Sbjct: 1 MGQKINPNGFRLGITTDHKSKWFTDSNKRGQRYADFVGEDVRIREMLQNNLERAGLSRVN 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + +++R +L +T +I L++ EV PEI+A L+
Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRLRGQLEKLTGKQIQLNILEVKNPEIDAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ +A+QL RV FRRAM++A+QSA R GA G++V SGRL GAE+SR+E Y EGRVPL
Sbjct: 121 AQGVAEQLASRVAFRRAMRKAIQSAQRAGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRD----EVSDSDSTIPA 217
TLRA+IDYG A T +G G+KV++ D E++ ++ P+
Sbjct: 181 TLRANIDYGFYEAHTTFGRIGVKVWIYKGDLTDKELAAQEAAQPS 225
>gi|325981811|ref|YP_004294213.1| 30S ribosomal protein S3 [Nitrosomonas sp. AL212]
gi|325531330|gb|ADZ26051.1| ribosomal protein S3 [Nitrosomonas sp. AL212]
Length = 272
Score = 258 bits (660), Expect = 3e-67, Method: Composition-based stats.
Identities = 119/226 (52%), Positives = 162/226 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRL V+ W SRW+A S + ++L+ED+K+R +L LK A V KILIER
Sbjct: 1 MGQKINPTGFRLSVHKNWLSRWYANSSNFASMLNEDIKVRNFLANRLKNASVGKILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI ++S+RPG++IGKKG DIE +R +L +H+++ E+ KPEI+A LIA +I
Sbjct: 61 SKNARITIFSSRPGVVIGKKGEDIEVLRSELQKRMGVPVHVNIEEIRKPEIDAQLIADNI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
+DYGT+ A+T YG GIKV++ + + D + E +
Sbjct: 181 DLDYGTSEAKTTYGIIGIKVWIFKGELLGKDDQVNHLITNTNSENE 226
>gi|317125866|ref|YP_004099978.1| 30S ribosomal protein S3P [Intrasporangium calvum DSM 43043]
gi|315589954|gb|ADU49251.1| SSU ribosomal protein S3P [Intrasporangium calvum DSM 43043]
Length = 277
Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats.
Identities = 105/228 (46%), Positives = 149/228 (65%), Gaps = 4/228 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQK+NP FRLG+ S WFA G Y + ED+ IR ++ +++AG+AK+
Sbjct: 1 MGQKVNPHGFRLGITTDHRSHWFADSTKVGQRYRDYVKEDVAIRRLMEKGMERAGIAKVE 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV PEI++ L+
Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQVQLNILEVKNPEIDSQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ IA+QL RV FRRAM++ +QSA R GA G++V SGRLNGAE+SRTE Y EGRVPL
Sbjct: 121 AQGIAEQLSARVSFRRAMRKGMQSAQRAGAKGIRVQVSGRLNGAEMSRTEFYREGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
TLRA IDYG A T +G G+KV++ D + + AA R
Sbjct: 181 TLRAQIDYGFYEARTTFGRIGVKVWIYKGDMTAKELAAQQAAAPRPSR 228
>gi|327438284|dbj|BAK14649.1| ribosomal protein S3 [Solibacillus silvestris StLB046]
Length = 218
Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats.
Identities = 98/219 (44%), Positives = 151/219 (68%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+GV W S+WFA +Y LLHED+K+R+Y++ LK A V+K+ IER
Sbjct: 1 MGQKVHPIGLRVGVIRDWESKWFAE-KDYANLLHEDIKVRKYIETKLKDASVSKVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK GT++E +RK L+ +T +H+++ E+ + +++A L+A++I
Sbjct: 60 ANRVNITIHTAKPGMVIGKGGTEVENLRKHLTEVTGKRVHINIIEIKRADLDAKLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRA K+++Q MR GA G+K SGRL GA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLENRVSFRRAQKQSIQRTMRAGAKGIKTQVSGRLGGADIARAEHYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDY A A+T YG G+KV++ + + +++ +
Sbjct: 180 DIDYAHAEADTTYGKLGVKVWIYRGEVLPTKKNSVEGGK 218
>gi|160914553|ref|ZP_02076768.1| hypothetical protein EUBDOL_00559 [Eubacterium dolichum DSM 3991]
gi|158433711|gb|EDP12000.1| hypothetical protein EUBDOL_00559 [Eubacterium dolichum DSM 3991]
Length = 266
Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats.
Identities = 105/224 (46%), Positives = 143/224 (63%), Gaps = 2/224 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+GV W SRW+A EY LL ED+KIRE++ LK A V+++ IER+
Sbjct: 1 MGQKVSPIGLRVGVIRDWESRWYAD-KEYADLLLEDVKIREFIFKELKAASVSRVEIERS 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119
I++ +ARPG+IIG G IE ++KK+ +T I+L V E+ P+++A L+A+S
Sbjct: 60 KNRVEIMIRTARPGVIIGTNGESIELLKKKIEKLTGGKNIYLKVLEIANPDLDAKLVARS 119
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA QLE+R FR A KRA+Q MR GA G+K SGRL GA+++RTE Y EG VPL TLR
Sbjct: 120 IADQLEQRASFRTAQKRAIQRTMRAGAKGIKTAVSGRLGGADMARTEGYSEGNVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223
A IDY A T YG G+KV++ + + T P A +
Sbjct: 180 ADIDYAWEEAHTTYGRLGVKVWICRGEVLPGQMVTEPEAPKNPM 223
>gi|300933004|ref|ZP_07148260.1| 30S ribosomal protein S3 [Corynebacterium resistens DSM 45100]
Length = 247
Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats.
Identities = 104/216 (48%), Positives = 149/216 (68%), Gaps = 2/216 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P RLG+ W SRW+A +Y L ED+KIR++L L +AG+A ++IERT
Sbjct: 1 MGQKIHPHGLRLGITSEWRSRWYAD-KQYADYLAEDIKIRDFLSKGLDRAGIADVVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
H R+ +++ARPG++IG++G++ ++IR +L +T ++ L++ EV + NA L+AQSI
Sbjct: 60 HDRVRVDIHTARPGIVIGRRGSEADRIRGQLEKLTGKQVQLNILEVKNIDANAQLVAQSI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+Q AM + G+KV+ SGRL GAE+ RTE Y EGRVPL TLR
Sbjct: 120 AEQLTNRVAFRRAMRKAIQGAMRQPQVKGIKVVCSGRLGGAEMGRTERYHEGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
A IDYGT A T +G G+KV++ D V ++
Sbjct: 180 AEIDYGTYEAHTTFGRIGVKVWIYKGDVVGGRRESL 215
>gi|269219000|ref|ZP_06162854.1| ribosomal protein S3 [Actinomyces sp. oral taxon 848 str. F0332]
gi|269212111|gb|EEZ78451.1| ribosomal protein S3 [Actinomyces sp. oral taxon 848 str. F0332]
Length = 265
Score = 258 bits (660), Expect = 4e-67, Method: Composition-based stats.
Identities = 96/211 (45%), Positives = 142/211 (67%), Gaps = 4/211 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE----YGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQK+NP FRLG+ S+WFA ++ Y + ED++IR ++ L +AG++++
Sbjct: 1 MGQKVNPTGFRLGITTDHRSKWFADSNKPGQRYADFVREDIQIRRMIEKTLDRAGISRVN 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IER + + +++ARPG++IG++G + +++R L +T I L++ EV PE +A L+
Sbjct: 61 IERRAERVVVDIHTARPGIVIGRRGAEADRLRADLEKLTGKAIQLNILEVKNPEADAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ IA+QL RV FRRAM++ +QSA R GA G++V SGRL GAE+SR+E Y EGRVPL
Sbjct: 121 AQGIAEQLASRVSFRRAMRKGIQSAERAGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
TLRA+IDYG A T +G G+KV++ D
Sbjct: 181 TLRANIDYGFYEARTTFGRIGVKVWIYRGDV 211
>gi|293375395|ref|ZP_06621676.1| ribosomal protein S3 [Turicibacter sanguinis PC909]
gi|325844408|ref|ZP_08168135.1| ribosomal protein S3 [Turicibacter sp. HGF1]
gi|292645948|gb|EFF63977.1| ribosomal protein S3 [Turicibacter sanguinis PC909]
gi|325489082|gb|EGC91466.1| ribosomal protein S3 [Turicibacter sp. HGF1]
Length = 219
Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats.
Identities = 95/219 (43%), Positives = 145/219 (66%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+GV W++RW+A ++ LLHEDLKIR+++ K+A V+++ IER
Sbjct: 1 MGQKVSPIGLRVGVIRDWDARWYANDKDFATLLHEDLKIRDFINNKFKKASVSRVEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
IIV++A+PG++IG+ G++ + +L MT + + + E+ +PE++A L+A SI
Sbjct: 61 KNRVNIIVHTAKPGMVIGRGGSEKDAAVAQLEKMTGKRVFIRIVEIKRPEVDAQLVANSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R FRR K A+Q A++FGA G+K SGRL GA+++R E Y EG VPL TLRA
Sbjct: 121 AEQLENRASFRRVQKVAIQRAIKFGAKGIKTQVSGRLGGADMARAEGYSEGNVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDY TA A+T YG G+KV++ + + + + +
Sbjct: 181 DIDYATAEADTTYGKLGVKVWIYKGEVLPTKNRQVKEGK 219
>gi|256827408|ref|YP_003151367.1| 30S ribosomal protein S3P [Cryptobacterium curtum DSM 15641]
gi|256583551|gb|ACU94685.1| SSU ribosomal protein S3P [Cryptobacterium curtum DSM 15641]
Length = 235
Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats.
Identities = 106/219 (48%), Positives = 149/219 (68%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FR+GV W SRW+A +Y L DL IR +L +L +A V+K+ IER
Sbjct: 1 MGQKVSPTGFRIGVIENWRSRWYAD-KDYAKTLENDLAIRRFLDGYLTRAAVSKVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++++ +ARPG++IGKKG +I+ +RKKLS + + I + V E+ +PE++A LIAQS+
Sbjct: 60 GDKIKVVITTARPGVVIGKKGAEIDTLRKKLSQVADGPISVEVIEIKRPELDANLIAQSV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRAM++AVQSA + GA G+++ +GRL GAE+SR E Y EGRVPL TLRA
Sbjct: 120 AEQLEGRVAFRRAMRKAVQSARKSGAQGIRIQCAGRLGGAEMSRREWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDYG A T G+ G++V+V + + PA E
Sbjct: 180 KIDYGFTTANTQMGAIGVQVWVYHGEVLPGQKLPEPALE 218
>gi|169830024|ref|YP_001700182.1| 30S ribosomal protein S3 [Lysinibacillus sphaericus C3-41]
gi|226697728|sp|B1HMX4|RS3_LYSSC RecName: Full=30S ribosomal protein S3
gi|168994512|gb|ACA42052.1| 30S ribosomal protein S3 [Lysinibacillus sphaericus C3-41]
Length = 217
Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats.
Identities = 98/213 (46%), Positives = 147/213 (69%), Gaps = 1/213 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+G+ W S+W+A +Y LLHED+K+R+Y++ LK A V+K+ IER
Sbjct: 1 MGQKVHPIGLRVGIIRDWESKWYAE-KDYATLLHEDIKVRKYIETALKDASVSKVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG +IGK GT++E +RK LS +T +H+++ E+ + +++A L+A++I
Sbjct: 60 ANRVNITIHTAKPGKVIGKGGTEVENLRKYLSELTGKRVHINIIEIKRADLDARLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRA K+A+Q +R GA G+K SGRL GA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLENRVSFRRAQKQAIQRTIRAGAKGIKTQVSGRLGGADIARAEHYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
IDY A A+T YG G+KV++ + + S
Sbjct: 180 DIDYAHAEADTTYGKLGVKVWIYRGEVLPTKKS 212
>gi|11465774|ref|NP_053918.1| ribosomal protein S3 [Porphyra purpurea]
gi|1710704|sp|P51308|RR3_PORPU RecName: Full=30S ribosomal protein S3, chloroplastic
gi|1276774|gb|AAC08194.1| 30S ribosomal protein S3 [Porphyra purpurea]
Length = 230
Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats.
Identities = 102/228 (44%), Positives = 141/228 (61%), Gaps = 2/228 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P+ FR+G+ S WFA +Y LL ED KIR ++ L A +AKI I R
Sbjct: 1 MGQKIHPLGFRIGITQKHRSSWFASSKDYSVLLQEDHKIRSFIHGKLSNASIAKIEINRK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLIAQ 118
+++ +ARPG+++GK G IE +R L+ + N +I ++V E+ P+ ATL+A+
Sbjct: 61 ADQVEVLIATARPGIVLGKSGAGIESLRNSLTLILDPNKQIRVNVVEISDPDSEATLVAE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
I QQLE+RV FRRA+++AVQ A R GVK+ SGRLNGAE++R+E EGRVPLQTL
Sbjct: 121 FITQQLEKRVAFRRAVRQAVQRAQRANTQGVKIQVSGRLNGAEIARSEWVREGRVPLQTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
RA IDY A T YG G+KV++ + + DS A + D
Sbjct: 181 RADIDYCHRQAHTTYGVLGVKVWLFKGELLPDSKVVELAPSQDQINPD 228
>gi|297623280|ref|YP_003704714.1| 30S ribosomal protein S3 [Truepera radiovictrix DSM 17093]
gi|297164460|gb|ADI14171.1| ribosomal protein S3 [Truepera radiovictrix DSM 17093]
Length = 264
Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats.
Identities = 106/226 (46%), Positives = 145/226 (64%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KINP+ FRLGVN +++W+A Y LL ED IR + + +GV++I IER
Sbjct: 1 MGNKINPVGFRLGVNKEPSAKWYANTKTYAKLLAEDDLIRRTVTADVGHSGVSRIDIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
N + +++A+PG++IG+ G I+++R+KL ++ + ++V EV P NA LIAQ I
Sbjct: 61 AHNVNVTIHTAKPGVVIGRGGESIKQLRQKLDHLIGGTVAVNVQEVANPNTNAALIAQRI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLERR FRRAMK+A+Q M GA GVK+ SGRL GAE +R E Y++GRVPLQTLRA
Sbjct: 121 AEQLERRFAFRRAMKQAIQRTMESGAKGVKIRCSGRLGGAEQARPESYMDGRVPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDYGTA A T YG G+KV+V + V D ++D
Sbjct: 181 DIDYGTARANTTYGVIGVKVWVFHGELVGDKQRRAANLPRPRQDED 226
>gi|237749521|ref|ZP_04580001.1| small subunit ribosomal protein S3 [Oxalobacter formigenes OXCC13]
gi|229380883|gb|EEO30974.1| small subunit ribosomal protein S3 [Oxalobacter formigenes OXCC13]
Length = 282
Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats.
Identities = 116/225 (51%), Positives = 160/225 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V W+SRW+A + + +L+EDLK R YL+ LK A V +++IER
Sbjct: 1 MGQKIHPTGFRLAVARNWSSRWYAGNTNFAGMLNEDLKARAYLKKKLKNASVGQVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN R +YS+RPG++IGKKG DIE ++ LS + +H+++ EV KPEI+A LIA SI
Sbjct: 61 AKNARFTIYSSRPGVVIGKKGEDIEVLKSDLSKIMGVPVHVNIEEVRKPEIHAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLE+R++FRRAM+RA+Q+AMR GA G+K+++SGRLNG E++R E Y EGRVPL TLRA
Sbjct: 121 TQQLEKRIMFRRAMRRAMQNAMRLGAVGIKIMSSGRLNGIEIARKEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDYG + A+T YG G+KV+V D + + ++ A +K
Sbjct: 181 DIDYGFSEAQTTYGIIGVKVWVYKGDRLENGEAPKIEAPAEEDKK 225
>gi|30018386|ref|NP_830017.1| 30S ribosomal protein S3 [Bacillus cereus ATCC 14579]
gi|30260307|ref|NP_842684.1| 30S ribosomal protein S3 [Bacillus anthracis str. Ames]
gi|42779197|ref|NP_976444.1| 30S ribosomal protein S3 [Bacillus cereus ATCC 10987]
gi|47525372|ref|YP_016721.1| 30S ribosomal protein S3 [Bacillus anthracis str. 'Ames Ancestor']
gi|49183150|ref|YP_026402.1| 30S ribosomal protein S3 [Bacillus anthracis str. Sterne]
gi|49481663|ref|YP_034468.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|52145104|ref|YP_081727.1| 30S ribosomal protein S3 [Bacillus cereus E33L]
gi|65317568|ref|ZP_00390527.1| COG0092: Ribosomal protein S3 [Bacillus anthracis str. A2012]
gi|118475885|ref|YP_893036.1| 30S ribosomal protein S3 [Bacillus thuringiensis str. Al Hakam]
gi|206972217|ref|ZP_03233164.1| 30S ribosomal protein S3 [Bacillus cereus AH1134]
gi|217957691|ref|YP_002336235.1| 30S ribosomal protein S3 [Bacillus cereus AH187]
gi|218232828|ref|YP_002364965.1| 30S ribosomal protein S3 [Bacillus cereus B4264]
gi|218895251|ref|YP_002443662.1| ribosomal protein S3 [Bacillus cereus G9842]
gi|218901320|ref|YP_002449154.1| ribosomal protein S3 [Bacillus cereus AH820]
gi|222093886|ref|YP_002527936.1| 30S ribosomal protein s3 [Bacillus cereus Q1]
gi|225862168|ref|YP_002747546.1| 30S ribosomal protein S3 [Bacillus cereus 03BB102]
gi|227812789|ref|YP_002812798.1| 30S ribosomal protein S3 [Bacillus anthracis str. CDC 684]
gi|228898869|ref|ZP_04063151.1| 30S ribosomal protein S3 [Bacillus thuringiensis IBL 4222]
gi|228905913|ref|ZP_04069810.1| 30S ribosomal protein S3 [Bacillus thuringiensis IBL 200]
gi|228912855|ref|ZP_04076502.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228919066|ref|ZP_04082445.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228925369|ref|ZP_04088465.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228931618|ref|ZP_04094524.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228937419|ref|ZP_04100065.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228943922|ref|ZP_04106307.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228950664|ref|ZP_04112798.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228956557|ref|ZP_04118353.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228963216|ref|ZP_04124385.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228970305|ref|ZP_04130964.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228976875|ref|ZP_04137287.1| 30S ribosomal protein S3 [Bacillus thuringiensis Bt407]
gi|228983371|ref|ZP_04143584.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229041021|ref|ZP_04189784.1| 30S ribosomal protein S3 [Bacillus cereus AH676]
gi|229067881|ref|ZP_04201198.1| 30S ribosomal protein S3 [Bacillus cereus F65185]
gi|229077416|ref|ZP_04210068.1| 30S ribosomal protein S3 [Bacillus cereus Rock4-2]
gi|229089247|ref|ZP_04220528.1| 30S ribosomal protein S3 [Bacillus cereus Rock3-42]
gi|229107802|ref|ZP_04237438.1| 30S ribosomal protein S3 [Bacillus cereus Rock1-15]
gi|229119778|ref|ZP_04249039.1| 30S ribosomal protein S3 [Bacillus cereus 95/8201]
gi|229125633|ref|ZP_04254665.1| 30S ribosomal protein S3 [Bacillus cereus BDRD-Cer4]
gi|229136962|ref|ZP_04265589.1| 30S ribosomal protein S3 [Bacillus cereus BDRD-ST26]
gi|229142922|ref|ZP_04271363.1| 30S ribosomal protein S3 [Bacillus cereus BDRD-ST24]
gi|229148525|ref|ZP_04276781.1| 30S ribosomal protein S3 [Bacillus cereus m1550]
gi|229153894|ref|ZP_04282024.1| 30S ribosomal protein S3 [Bacillus cereus ATCC 4342]
gi|229159289|ref|ZP_04287313.1| 30S ribosomal protein S3 [Bacillus cereus R309803]
gi|229176716|ref|ZP_04304120.1| 30S ribosomal protein S3 [Bacillus cereus 172560W]
gi|229182510|ref|ZP_04309761.1| 30S ribosomal protein S3 [Bacillus cereus BGSC 6E1]
gi|229188401|ref|ZP_04315449.1| 30S ribosomal protein S3 [Bacillus cereus ATCC 10876]
gi|229194506|ref|ZP_04321309.1| 30S ribosomal protein S3 [Bacillus cereus m1293]
gi|229604556|ref|YP_002864767.1| 30S ribosomal protein S3 [Bacillus anthracis str. A0248]
gi|296500949|ref|YP_003662649.1| 30S ribosomal protein S3 [Bacillus thuringiensis BMB171]
gi|300119571|ref|ZP_07057115.1| 30S ribosomal protein S3 [Bacillus cereus SJ1]
gi|301051853|ref|YP_003790064.1| 30S ribosomal protein S3 [Bacillus anthracis CI]
gi|34098359|sp|Q81J36|RS3_BACCR RecName: Full=30S ribosomal protein S3
gi|34098360|sp|Q81VS4|RS3_BACAN RecName: Full=30S ribosomal protein S3
gi|61215459|sp|Q63H84|RS3_BACCZ RecName: Full=30S ribosomal protein S3
gi|61215553|sp|Q6HPQ2|RS3_BACHK RecName: Full=30S ribosomal protein S3
gi|61215627|sp|Q73F90|RS3_BACC1 RecName: Full=30S ribosomal protein S3
gi|152060846|sp|A0R8I6|RS3_BACAH RecName: Full=30S ribosomal protein S3
gi|29893926|gb|AAP07218.1| SSU ribosomal protein S3P [Bacillus cereus ATCC 14579]
gi|30253628|gb|AAP24170.1| 30S ribosomal protein S3 [Bacillus anthracis str. Ames]
gi|42735112|gb|AAS39052.1| ribosomal protein S3 [Bacillus cereus ATCC 10987]
gi|47500520|gb|AAT29196.1| ribosomal protein S3 [Bacillus anthracis str. 'Ames Ancestor']
gi|49177077|gb|AAT52453.1| ribosomal protein S3 [Bacillus anthracis str. Sterne]
gi|49333219|gb|AAT63865.1| ribosomal protein S3 (30S ribosomal protein S3) [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|51978573|gb|AAU20123.1| ribosomal protein S3 (30S ribosomal protein S3) [Bacillus cereus
E33L]
gi|118415110|gb|ABK83529.1| SSU ribosomal protein S3P [Bacillus thuringiensis str. Al Hakam]
gi|206732791|gb|EDZ49966.1| 30S ribosomal protein S3 [Bacillus cereus AH1134]
gi|217065283|gb|ACJ79533.1| ribosomal protein S3 [Bacillus cereus AH187]
gi|218160785|gb|ACK60777.1| ribosomal protein S3 [Bacillus cereus B4264]
gi|218538933|gb|ACK91331.1| ribosomal protein S3 [Bacillus cereus AH820]
gi|218541179|gb|ACK93573.1| ribosomal protein S3 [Bacillus cereus G9842]
gi|221237934|gb|ACM10644.1| ribosomal protein S3 (30S ribosomal protein S3) [Bacillus cereus
Q1]
gi|225789320|gb|ACO29537.1| 30S ribosomal protein S3 [Bacillus cereus 03BB102]
gi|227002828|gb|ACP12571.1| 30S ribosomal protein S3 [Bacillus anthracis str. CDC 684]
gi|228588972|gb|EEK46987.1| 30S ribosomal protein S3 [Bacillus cereus m1293]
gi|228595075|gb|EEK52846.1| 30S ribosomal protein S3 [Bacillus cereus ATCC 10876]
gi|228600965|gb|EEK58534.1| 30S ribosomal protein S3 [Bacillus cereus BGSC 6E1]
gi|228606759|gb|EEK64176.1| 30S ribosomal protein S3 [Bacillus cereus 172560W]
gi|228624181|gb|EEK80983.1| 30S ribosomal protein S3 [Bacillus cereus R309803]
gi|228629575|gb|EEK86272.1| 30S ribosomal protein S3 [Bacillus cereus ATCC 4342]
gi|228634941|gb|EEK91514.1| 30S ribosomal protein S3 [Bacillus cereus m1550]
gi|228640543|gb|EEK96932.1| 30S ribosomal protein S3 [Bacillus cereus BDRD-ST24]
gi|228646500|gb|EEL02707.1| 30S ribosomal protein S3 [Bacillus cereus BDRD-ST26]
gi|228657825|gb|EEL13631.1| 30S ribosomal protein S3 [Bacillus cereus BDRD-Cer4]
gi|228663679|gb|EEL19258.1| 30S ribosomal protein S3 [Bacillus cereus 95/8201]
gi|228675651|gb|EEL30859.1| 30S ribosomal protein S3 [Bacillus cereus Rock1-15]
gi|228694086|gb|EEL47768.1| 30S ribosomal protein S3 [Bacillus cereus Rock3-42]
gi|228705892|gb|EEL58226.1| 30S ribosomal protein S3 [Bacillus cereus Rock4-2]
gi|228715240|gb|EEL67099.1| 30S ribosomal protein S3 [Bacillus cereus F65185]
gi|228727318|gb|EEL78512.1| 30S ribosomal protein S3 [Bacillus cereus AH676]
gi|228776361|gb|EEM24714.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228782845|gb|EEM31011.1| 30S ribosomal protein S3 [Bacillus thuringiensis Bt407]
gi|228789414|gb|EEM37334.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228796474|gb|EEM43913.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228803122|gb|EEM49944.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228809015|gb|EEM55500.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228815755|gb|EEM61991.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228822252|gb|EEM68234.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228828046|gb|EEM73774.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228834291|gb|EEM79832.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228840591|gb|EEM85853.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228846791|gb|EEM91796.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228853728|gb|EEM98488.1| 30S ribosomal protein S3 [Bacillus thuringiensis IBL 200]
gi|228860769|gb|EEN05147.1| 30S ribosomal protein S3 [Bacillus thuringiensis IBL 4222]
gi|229268964|gb|ACQ50601.1| 30S ribosomal protein S3 [Bacillus anthracis str. A0248]
gi|296322001|gb|ADH04929.1| 30S ribosomal protein S3 [Bacillus thuringiensis BMB171]
gi|298723043|gb|EFI63941.1| 30S ribosomal protein S3 [Bacillus cereus SJ1]
gi|300374022|gb|ADK02926.1| 30S ribosomal protein S3 [Bacillus cereus biovar anthracis str. CI]
gi|324324107|gb|ADY19367.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar finitimus
YBT-020]
gi|326937911|gb|AEA13807.1| 30S ribosomal protein S3 [Bacillus thuringiensis serovar chinensis
CT-43]
Length = 219
Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats.
Identities = 102/220 (46%), Positives = 144/220 (65%), Gaps = 1/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI R+GV W SRWFA +Y LLHED+KIREY+ LK + VAK+ IER
Sbjct: 1 MGQKVNPIGLRVGVIRDWESRWFAE-KDYATLLHEDIKIREYINVRLKDSAVAKVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK GT++E +RK L+ +T +H+++ EV + ++NA L+ ++I
Sbjct: 60 ANRVNVTIHTAKPGMVIGKGGTEVEALRKALNQLTGKRVHINILEVKRADLNAKLVGENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRA K+ +Q AMR GA G+K SGRL GA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLENRVSFRRAQKQVIQRAMRAGAKGIKTQVSGRLGGADIARAESYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
IDY A+T YG G+KV++ + +
Sbjct: 180 DIDYAAVEADTTYGKLGVKVWIYRGEVLPTKKKASEEGGK 219
>gi|71083798|ref|YP_266518.1| 30S ribosomal protein S3 [Candidatus Pelagibacter ubique HTCC1062]
gi|91207827|sp|Q4FLM4|RS3_PELUB RecName: Full=30S ribosomal protein S3
gi|71062911|gb|AAZ21914.1| 30S ribosomal protein S3 [Candidatus Pelagibacter ubique HTCC1062]
Length = 226
Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats.
Identities = 110/226 (48%), Positives = 155/226 (68%), Gaps = 2/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ FRLGVN W+S W+A+ ++G L ED KIR Y++ ++ +GV+K++IERT
Sbjct: 1 MGQKVNPVGFRLGVNRGWDSVWYAKKKDFGNYLIEDFKIRAYIKKNVVNSGVSKVMIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
C + +Y++RPG +IGKKG+DI+KI+ LS TN+E+ L++ EV KPE NA L+A++I
Sbjct: 61 SNKCFVTIYTSRPGFVIGKKGSDIDKIKNNLSKFTNNEVTLNIKEVKKPETNAYLVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQL +R+ +RRAMKRA+QS +R GA G+KV SGRL G E++RTE EG +P TLRA
Sbjct: 121 AQQLVKRISYRRAMKRAMQSCLRLGAKGIKVSISGRLGGNEIARTEWLREGSIPSHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS--DSTIPAAEHRVVE 224
IDY A A T +G GIK+++ + + T V E
Sbjct: 181 DIDYAEAEALTTFGIIGIKIWIYKGEVFAKEFSQETNKIVPKEVKE 226
>gi|171778382|ref|ZP_02919561.1| hypothetical protein STRINF_00412 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171282913|gb|EDT48337.1| hypothetical protein STRINF_00412 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 217
Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 148/215 (68%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L A V++I IER
Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFIQTELADASVSRIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G +++ +R KL+ +T ++H+++ E+ +P+++A L+ ++I
Sbjct: 60 VNKVIVSLHTAKPGMVIGKGGANVDALRAKLNKLTGKQVHINIVEIKQPDLDAHLVGENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE+RV FRRA K+A+Q MR GA G+K SGRLNGA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLEQRVAFRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDY A+T YG G+KV++ + + +T
Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTK 214
>gi|71282222|ref|YP_267616.1| 30S ribosomal protein S3 [Colwellia psychrerythraea 34H]
gi|91207648|sp|Q487Z9|RS3_COLP3 RecName: Full=30S ribosomal protein S3
gi|71147962|gb|AAZ28435.1| ribosomal protein S3 [Colwellia psychrerythraea 34H]
Length = 231
Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats.
Identities = 110/224 (49%), Positives = 155/224 (69%), Gaps = 2/224 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP RLG+ + S WFA ++ + L D K+RE+L+ LK+A ++K++IER
Sbjct: 1 MGQKVNPTGIRLGITKPFASTWFASNKDFASNLDGDHKVREFLKEKLKRASLSKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R +S + +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRLAVSKIAGVPAQINIAEVRKPEMDAQLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GA+++R E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVQVSGRLGGADIARAEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV--SDSDSTIPAAEHRV 222
IDY A T YG GIKV++ + + + +PAA+ +
Sbjct: 181 DIDYAIARGNTTYGVIGIKVWIFKGEIIGNMPLQAEVPAAKPKR 224
>gi|94987408|ref|YP_595341.1| 30S ribosomal protein S3 [Lawsonia intracellularis PHE/MN1-00]
gi|123262113|sp|Q1MPQ7|RS3_LAWIP RecName: Full=30S ribosomal protein S3
gi|94731657|emb|CAJ55020.1| ribosomal protein S3 [Lawsonia intracellularis PHE/MN1-00]
Length = 213
Score = 258 bits (659), Expect = 4e-67, Method: Composition-based stats.
Identities = 107/208 (51%), Positives = 146/208 (70%), Gaps = 1/208 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG N W SRWF+ +Y ++ED KIR Y++ L AG++K+ IER
Sbjct: 1 MGQKVHPYGFRLGYNKNWQSRWFS-KKDYANFIYEDYKIRSYIKKLLYSAGISKMEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+++ +ARPG++IG+KG +IEK+R +L E L V EV +PE++A L+A++I
Sbjct: 60 GGKICLMLSTARPGIVIGRKGVEIEKLRLELRKNFGQEFSLEVTEVRRPEVDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV FRRAMKR V A +FGA+G+K+ SGRL GAE++RTE Y +GRVPLQTLRA
Sbjct: 120 AMQLERRVAFRRAMKRTVSMARKFGAEGIKITCSGRLAGAEIARTEWYRDGRVPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
IDYG A A T YG G+KV++ + +
Sbjct: 180 DIDYGFAEAHTTYGIIGVKVWIYKGEVL 207
>gi|85858152|ref|YP_460354.1| 30S ribosomal protein S3 [Syntrophus aciditrophicus SB]
gi|123752424|sp|Q2LQ95|RS3_SYNAS RecName: Full=30S ribosomal protein S3
gi|85721243|gb|ABC76186.1| SSU ribosomal protein S3P [Syntrophus aciditrophicus SB]
Length = 216
Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats.
Identities = 118/216 (54%), Positives = 157/216 (72%), Gaps = 1/216 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N WNSRW+A Y ++L+EDLKIR YL+ L AG++ I IER
Sbjct: 1 MGQKVNPIGLRLGINKNWNSRWYAD-KSYRSMLYEDLKIRGYLKKKLYHAGISHIDIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ +Y+ARPG+IIGKKG +IEK++K+L N+++SEI +++ EV KPEI+A L+A++I
Sbjct: 60 VNKAKVNIYAARPGIIIGKKGAEIEKLKKELENVSSSEIIINILEVRKPEIDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV FRRAMK+ V +A++FGA G++V SGRL GAE+SRTE Y EGRVPL TLRA
Sbjct: 120 ATQLERRVAFRRAMKKCVLTALKFGAKGIRVSCSGRLGGAEMSRTEWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
ID G A+TAYG GIKV + + +
Sbjct: 180 DIDSGFTEAKTAYGQIGIKVLIFHGEVLPGRKELEK 215
>gi|111023102|ref|YP_706074.1| 30S ribosomal protein S3 [Rhodococcus jostii RHA1]
gi|226365601|ref|YP_002783384.1| 30S ribosomal protein S3 [Rhodococcus opacus B4]
gi|122955192|sp|Q0S3H0|RS3_RHOSR RecName: Full=30S ribosomal protein S3
gi|254764542|sp|C1B018|RS3_RHOOB RecName: Full=30S ribosomal protein S3
gi|110822632|gb|ABG97916.1| 30S ribosomal protein S3 [Rhodococcus jostii RHA1]
gi|226244091|dbj|BAH54439.1| 30S ribosomal protein S3 [Rhodococcus opacus B4]
Length = 268
Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats.
Identities = 100/217 (46%), Positives = 144/217 (66%), Gaps = 2/217 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG+ W SRW+A +Y + ED+ IR+ L +++AG+AK+ IERT
Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYAEYVKEDVAIRKLLATGMERAGIAKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV E A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRSELEKLTGKQVQLNILEVKNAEAEAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR
Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
A IDYG A+T +G G+KV++ D V
Sbjct: 180 ADIDYGLYEAKTTFGRIGVKVWIYKGDIVGGKRELAA 216
>gi|329118604|ref|ZP_08247308.1| 30S ribosomal protein S3 [Neisseria bacilliformis ATCC BAA-1200]
gi|327465339|gb|EGF11620.1| 30S ribosomal protein S3 [Neisseria bacilliformis ATCC BAA-1200]
Length = 231
Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats.
Identities = 113/227 (49%), Positives = 163/227 (71%), Gaps = 3/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL VN W+S+WFA+ ++ +L +D+ +REYL+ L A V ++LIER
Sbjct: 1 MGQKIHPTGFRLAVNKNWSSKWFAKTGDFSNVLKQDIDVREYLRKRLANASVGRVLIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ RI +YSARPG++IG+KG DIE +++ L N+ +H+++ E+ KPE++A +IA I
Sbjct: 61 AKSARITIYSARPGIVIGRKGEDIEVLKQDLQNLLGVPVHVNIEEIRKPELDAQIIADGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+RV FRRAMKRA+Q+AMR GA GVK++ SGRLNGA+++R+E Y EGRVPL TLRA
Sbjct: 121 AQQLEKRVQFRRAMKRAMQNAMRVGAKGVKIMTSGRLNGADIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
++DY T+ A T YG G+KV+V + ++S +E + +
Sbjct: 181 NVDYATSEAHTTYGVIGLKVWVYTGE---GNESIQSKSEQENKRRKA 224
>gi|148544690|ref|YP_001272060.1| 30S ribosomal protein S3 [Lactobacillus reuteri DSM 20016]
gi|184154043|ref|YP_001842384.1| 30S ribosomal protein S3 [Lactobacillus reuteri JCM 1112]
gi|194466947|ref|ZP_03072934.1| ribosomal protein S3 [Lactobacillus reuteri 100-23]
gi|227363813|ref|ZP_03847920.1| 30S ribosomal protein S3 [Lactobacillus reuteri MM2-3]
gi|227543617|ref|ZP_03973666.1| 30S ribosomal protein S3 [Lactobacillus reuteri CF48-3A]
gi|300909354|ref|ZP_07126815.1| 30S ribosomal protein S3 [Lactobacillus reuteri SD2112]
gi|325683024|ref|ZP_08162540.1| 30S ribosomal protein S3 [Lactobacillus reuteri MM4-1A]
gi|172048239|sp|A5VLJ9|RS3_LACRD RecName: Full=30S ribosomal protein S3
gi|148531724|gb|ABQ83723.1| SSU ribosomal protein S3P [Lactobacillus reuteri DSM 20016]
gi|183225387|dbj|BAG25904.1| 30S ribosomal protein S3 [Lactobacillus reuteri JCM 1112]
gi|194453983|gb|EDX42880.1| ribosomal protein S3 [Lactobacillus reuteri 100-23]
gi|227071170|gb|EEI09486.1| 30S ribosomal protein S3 [Lactobacillus reuteri MM2-3]
gi|227186457|gb|EEI66528.1| 30S ribosomal protein S3 [Lactobacillus reuteri CF48-3A]
gi|300893219|gb|EFK86578.1| 30S ribosomal protein S3 [Lactobacillus reuteri SD2112]
gi|324977374|gb|EGC14325.1| 30S ribosomal protein S3 [Lactobacillus reuteri MM4-1A]
Length = 221
Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats.
Identities = 93/219 (42%), Positives = 147/219 (67%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FR+GV W ++W+A ++ L+EDL+IR+Y++ L A V+ + IER
Sbjct: 1 MGQKINPNGFRVGVIRDWTAKWYAD-KDFADYLNEDLRIRKYIEKRLADASVSTVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G+++E +RK+L+ +T +H+++ E+ KP+++A L+ +SI
Sbjct: 60 ANRVNVSIHTAKPGMVIGKGGSEVEALRKELNKLTGKRVHINIVEIKKPDLDAHLVGESI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRAM+ A+Q AMR GA G+K +GRLNGA++SR E Y +G VPL TLRA
Sbjct: 120 ARQLEARIAFRRAMRGAMQRAMRAGAKGIKTQVAGRLNGADMSRIESYSDGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDY A T YG G+K ++ + + ++ +
Sbjct: 180 DIDYSWDEANTTYGVLGVKTWIYRGEVLPTKKNSNNDEQ 218
>gi|320548049|ref|ZP_08042329.1| 30S ribosomal protein S3 [Streptococcus equinus ATCC 9812]
gi|320447291|gb|EFW88054.1| 30S ribosomal protein S3 [Streptococcus equinus ATCC 9812]
Length = 217
Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats.
Identities = 95/215 (44%), Positives = 149/215 (69%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L A V++I IER
Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFIQTELADASVSRIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G +++ +R KL+ +T ++H+++ E+ +P+++A L+ ++I
Sbjct: 60 VNKVIVSLHTAKPGMVIGKGGANVDALRVKLNKLTGKQVHINIVEIKQPDLDAHLVGENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE+RV FRRA K+A+Q AMR GA G+K SGRLNGA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLEQRVAFRRAQKQAIQRAMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDY A+T YG G+KV++ + + +T
Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTK 214
>gi|326803039|ref|YP_004320857.1| ribosomal protein S3 [Aerococcus urinae ACS-120-V-Col10a]
gi|326650398|gb|AEA00581.1| ribosomal protein S3 [Aerococcus urinae ACS-120-V-Col10a]
Length = 216
Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats.
Identities = 100/217 (46%), Positives = 150/217 (69%), Gaps = 1/217 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP R+GV W++RWF +Y LHEDL +R+Y++ LK A ++++ IER
Sbjct: 1 MGQKINPTGLRIGVIKDWDARWF-EEKDYANTLHEDLAVRDYIEDALKDASISQVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I V++A+PG++IGK G+++EK+RK L+ +T +H++V EV +P+++A L+ ++I
Sbjct: 60 ANKVNINVHTAKPGMVIGKGGSEVEKLRKDLNQLTGKRVHINVIEVKQPDLSAELVGENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE R+ FRRAMK+A+Q M+ GA G+KV SGRLNGA+++RTE EG VPL TLRA
Sbjct: 120 AQQLENRIAFRRAMKQAIQRTMKAGAQGIKVQVSGRLNGADMARTEALDEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
IDY A+T YG G+KV++ + + +++
Sbjct: 180 DIDYAWVEADTTYGKIGVKVWICRGEVLPTTNNQEEE 216
>gi|302669967|ref|YP_003829927.1| ribosomal protein S3 RpsC [Butyrivibrio proteoclasticus B316]
gi|302394440|gb|ADL33345.1| ribosomal protein S3 RpsC [Butyrivibrio proteoclasticus B316]
Length = 223
Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats.
Identities = 99/219 (45%), Positives = 146/219 (66%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+S+W+A +++ L ED IR++L+ L AGV+KI IER
Sbjct: 1 MGQKVNPHGLRVGVIADWDSKWYAESADFANNLVEDYNIRKFLKKKLYAAGVSKIEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++IVY+A+PG++IGK G +IE +K+LS +T+ ++ + + E+ KP+ +A L+A++I
Sbjct: 61 SDRVKVIVYTAKPGVVIGKGGAEIEVTKKELSKLTDKKVLVDIKEIKKPDKDAQLVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE RV FRRAMK + M+ A G+K SGRL GA+++R+E Y EG +PLQTLRA
Sbjct: 121 AQQLENRVSFRRAMKSCMSRTMKTDALGIKACCSGRLGGADIARSEFYSEGTIPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDYG A A+T YG G+KV++ + + E
Sbjct: 181 DIDYGFAEADTTYGKVGVKVWIYKGEVLPTKAGENSDKE 219
>gi|46199624|ref|YP_005291.1| 30S ribosomal protein S3 [Thermus thermophilus HB27]
gi|55981655|ref|YP_144952.1| 30S ribosomal protein S3 [Thermus thermophilus HB8]
gi|24212666|sp|P80372|RS3_THET8 RecName: Full=30S ribosomal protein S3
gi|50401227|sp|P62663|RS3_THET2 RecName: Full=30S ribosomal protein S3
gi|10835587|pdb|1FJG|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With The Antibiotics Streptomycin,
Spectinomycin, And Paromomycin
gi|13096396|pdb|1HR0|C Chain C, Crystal Structure Of Initiation Factor If1 Bound To The
30s Ribosomal Subunit
gi|13399794|pdb|1HNW|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With Tetracycline
gi|13399816|pdb|1HNX|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With Pactamycin
gi|13399838|pdb|1HNZ|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With Hygromycin B
gi|14278012|pdb|1GIX|F Chain F, Crystal Structure Of The Ribosome At 5.5 A Resolution.
This File, 1gix, Contains The 30s Ribosome Subunit,
Three Trna, And Mrna Molecules. 50s Ribosome Subunit Is
In The File 1giy
gi|14278058|pdb|1IBK|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With The Antibiotic Paromomycin
gi|14278079|pdb|1IBL|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With A Messenger Rna Fragment And
Cognate Transfer Rna Anticodon Stem-Loop Bound At The A
Site And With The Antibiotic Paromomycin
gi|14278103|pdb|1IBM|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In Complex With A Messenger Rna Fragment And
Cognate Transfer Rna Anticodon Stem-Loop Bound At The A
Site
gi|15826122|pdb|1JGO|F Chain F, The Path Of Messenger Rna Through The Ribosome. This File,
1jgo, Contains The 30s Ribosome Subunit, Three Trna, And
Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy
gi|15826147|pdb|1JGP|F Chain F, The Path Of Messenger Rna Through The Ribosome. This File,
1jgp, Contains The 30s Ribosome Subunit, Three Trna, And
Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy
gi|15826172|pdb|1JGQ|F Chain F, The Path Of Messenger Rna Through The Ribosome. This File,
1jgq, Contains The 30s Ribosome Subunit, Three Trna, And
Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy
gi|20663888|pdb|1J5E|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit
gi|27065878|pdb|1N32|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Bound To Codon And Near-Cognate Transfer Rna
Anticodon Stem-Loop Mismatched At The First Codon
Position At The A Site With Paromomycin
gi|27065905|pdb|1N33|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Bound To Codon And Near-Cognate Transfer Rna
Anticodon Stem-Loop Mismatched At The Second Codon
Position At The A Site With Paromomycin
gi|27065932|pdb|1N34|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In The Presence Of Codon And
Crystallographically Disordered Near-Cognate Transfer
Rna Anticodon Stem-Loop Mismatched At The First Codon
Position
gi|27065958|pdb|1N36|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit In The Presence Of Crystallographically
Disordered Codon And Near-Cognate Transfer Rna Anticodon
Stem-Loop Mismatched At The Second Codon Position
gi|28373701|pdb|1ML5|F Chain F, Structure Of The E. Coli Ribosomal Termination Complex
With Release Factor 2
gi|58177402|pdb|1XMO|C Chain C, Crystal Structure Of Mnm5u34t6a37-Trnalysuuu Complexed
With Aag-Mrna In The Decoding Center
gi|58177425|pdb|1XMQ|C Chain C, Crystal Structure Of T6a37-Asllysuuu Aaa-Mrna Bound To The
Decoding Center
gi|58177466|pdb|1XNQ|C Chain C, Structure Of An Inosine-Adenine Wobble Base Pair Complex
In The Context Of The Decoding Center
gi|58177489|pdb|1XNR|C Chain C, Crystal Structure Of An Inosine-Cytosine Wobble Base Pair
In The Context Of The Decoding Center
gi|66361056|pdb|1YL4|F Chain F, Crystal Structure Of 70s Ribosome With Thrs Operator And
Trnas. 30s Subunit. The Coordinates For The 50s Subunit
Are In The Pdb Entry 1yl3
gi|88192238|pdb|2B64|C Chain C, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf1
From A Crystal Structure Of The Whole Ribosomal Complex.
This File Contains The 30s Subunit, Trnas, Mrna And
Release Factor Rf1 From A Crystal Structure Of The Whole
Ribosomal Complex". The Entire Crystal Structure
Contains One 70s Ribosome, Trnas, Mrna And Release
Factor Rf1 And Is Described In Remark 400.
gi|88192301|pdb|2B9M|C Chain C, 30s Ribosomal Subunit, Trnas, Mrna And Release Factor Rf2
From A Crystal Structure Of The Whole Ribosomal Complex.
This File Contains The 30s Ribosomal Subunit, Trnas,
Mrna And Release Factor Rf2 From A Crystal Structure Of
The Whole Ribosomal Complex". The Entire Crystal
Structure Contains One 70s Ribosome, Trnas, Mrna And
Release Factor Rf2 And Is Described In Remark 400.
gi|88192357|pdb|2B9O|C Chain C, 30s Ribosomal Subunit, Trnas And Mrna From A Crystal
Structure Of The Whole Ribosomal Complex With A Stop
Codon In The A-Site. This File Contains The 30s Subunit,
Trnas And Mrna From A Crystal Structure Of The Whole
Ribosomal Complex With A Stop Codon In The A-Site And Is
Described In Remark 400.
gi|110591325|pdb|2F4V|C Chain C, 30s Ribosome + Designer Antibiotic
gi|116667656|pdb|2HHH|C Chain C, Crystal Structure Of Kasugamycin Bound To The 30s
Ribosomal Subunit
gi|116668199|pdb|2J00|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Mrna, Trna And Paromomycin (Part 1 Of 4).
This File Contains The 30s Subunit, Mrna, A-, P- And
E-Site Trnas And Paromomycin For Molecule I.
gi|116668260|pdb|2J02|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Mrna, Trna And Paromomycin (Part 3 Of 4)
This File Contains The 30s Subunit, Mrna, A-, P- And
E-Site Trnas And Paromomycin For Molecule Ii.
gi|119389714|pdb|2HGI|F Chain F, Crystal Structure Of The 70s Thermus Thermophilus Ribosome
Showing How The 16s 3'-End Mimicks Mrna E And P Codons.
This Entry 2hgi Contains 30s Ribosomal Subunit. The 50s
Ribosomal Subunit Can Be Found In Pdb Entry 2hgj.
gi|119389771|pdb|2HGP|F Chain F, Crystal Structure Of The 70s Thermus Thermophilus Ribosome
With Translocated And Rotated Shine-Dalgarno Duplex.
This Entry 2hgp Contains 30s Ribosomal Subunit. The 50s
Ribosomal Subunit Can Be Found In Pdb Entry 2hgq.
gi|119389827|pdb|2HGR|F Chain F, 70s T.Th. Ribosome Functional Complex With Mrna And E- And
P-Site Trnas At 4.5a. This Entry 2hgr Contains 30s
Ribosomal Subunit. The 50s Ribosomal Subunit Can Be
Found In Pdb Entry 2hgu.
gi|149242710|pdb|2OW8|DD Chain d, Crystal Structure Of A 70s Ribosome-Trna Complex Reveals
Functional Interactions And Rearrangements. This File,
2ow8, Contains The 30s Ribosome Subunit, Two Trna, And
Mrna Molecules. 50s Ribosome Subunit Is In The File
1vsa.
gi|149243620|pdb|2UU9|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-Asl With Cmo5u In
Position 34 Bound To An Mrna With A Gug-Codon In The
A-Site And Paromomycin.
gi|149243647|pdb|2UUA|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-Asl With Cmo5u In
Position 34 Bound To An Mrna With A Guc-Codon In The
A-Site And Paromomycin.
gi|149243674|pdb|2UUB|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-Asl With Cmo5u In
Position 34 Bound To An Mrna With A Guu-Codon In The
A-Site And Paromomycin.
gi|149243701|pdb|2UUC|C Chain C, Structure Of The Thermus Thermophilus 30s Ribosomal
Subunit Complexed With A Valine-Asl With Cmo5u In
Position 34 Bound To An Mrna With A Gua-Codon In The
A-Site And Paromomycin.
gi|149243840|pdb|2UXC|C Chain C, Crystal Structure Of An Extended Trna Anticodon Stem Loop
In Complex With Its Cognate Mrna Ucgu In The Context Of
The Thermus Thermophilus 30s Subunit.
gi|157836410|pdb|2UXB|C Chain C, Crystal Structure Of An Extended Trna Anticodon Stem Loop
In Complex With Its Cognate Mrna Gggu In The Context Of
The Thermus Thermophilus 30s Subunit.
gi|157836487|pdb|2V46|C Chain C, Structure Of The Ribosome Recycling Factor Bound To The
Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And
Trna-Fmet (Part 1 Of 4). This File Contains The 30s
Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For
Molecule 1.
gi|157836543|pdb|2V48|C Chain C, Structure Of The Ribosome Recycling Factor Bound To The
Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And
Trna-Fmet (Part 3 Of 4). This File Contains The 30s
Subunit, Mrna, P-Site Asl, E-Site Trna And Rrf For
Molecule 2.
gi|158430902|pdb|2UXD|C Chain C, Crystal Structure Of An Extended Trna Anticodon Stem Loop
In Complex With Its Cognate Mrna Cggg In The Context Of
The Thermus Thermophilus 30s Subunit.
gi|160285941|pdb|2QNH|DD Chain d, Interactions And Dynamics Of The Shine-Dalgarno Helix In
The 70s Ribosome. This File, 2qnh, Contains The 30s
Ribosome Subunit, Two Trna, And Mrna Molecules. 50s
Ribosome Subunit Is In The File 1vsp.
gi|186972851|pdb|2VQE|C Chain C, Modified Uridines With C5-Methylene Substituents At The
First Position Of The Trna Anticodon Stabilize U-G
Wobble Pairing During Decoding
gi|186972874|pdb|2VQF|C Chain C, Modified Uridines With C5-Methylene Substituents At The
First Position Of The Trna Anticodon Stabilize U-G
Wobble Pairing During Decoding
gi|209156498|pdb|3D5A|C Chain C, Structural Basis For Translation Termination On The 70s
Ribosome. This File Contains The 30s Subunit, Release
Factor 1 (Rf1), Two Trna, And Mrna Molecules Of One 70s
Ribosome. The Entire Crystal Structure Contains Two 70s
Ribosomes As Described In Remark 400.
gi|209156554|pdb|3D5C|C Chain C, Structural Basis For Translation Termination On The 70s
Ribosome. This File Contains The 30s Subunit, Release
Factor 1 (Rf1), Two Trna, And Mrna Molecules Of The
Second 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes As Described In Remark 400.
gi|211938821|pdb|2JL5|C Chain C, Insights Into Translational Termination From The Structure
Of Rf2 Bound To The Ribosome (Part 1 Of 4). This File
Contains The 30s Subunit.
gi|211938879|pdb|2JL7|C Chain C, Insights Into Translational Termination From The Structure
Of Rf2 Bound To The Ribosome (Part 3 Of 4). This File
Contains The 30s Subunit.
gi|218766775|pdb|3F1E|C Chain C, Crystal Structure Of A Translation Termination Complex
Formed With Release Factor Rf2. This File Contains The
30s Subunit, Rf2, Two Trna, And Mrna Molecules Of One
70s Ribosome. The Entire Crystal Structure Contains Two
70s Ribosomes As Described In Remark 400.
gi|218766831|pdb|3F1G|C Chain C, Crystal Structure Of A Translation Termination Complex
Formed With Release Factor Rf2. This File Contains The
30s Subunit, Rf2, Two Trna, And Mrna Molecules Of The
Second 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes As Described In Remark 400.
gi|226887376|pdb|2WDG|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A-Site Trna,
Deacylated P-Site Trna, And E-Site Trna. This File
Contains The 30s Subunit A-,P-, And E-Site Trnas And
Paromomycin For Molecule I.
gi|226887401|pdb|2WDH|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A-Site Trna,
Deacylated P-Site Trna, And E-Site Trna. This File
Contains The 30s Subunit A-,P-, And E-Site Trnas And
Paromomycin For Molecule Ii.
gi|226887490|pdb|2WDK|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A- And P-Site
Trnas, And E-Site Trna. This File Contains The 30s
Subunit A-,P-, And E-Site Trnas And Paromomycin For
Molecule I.
gi|226887547|pdb|2WDM|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A- And P-Site
Trnas, And E-Site Trna. This File Contains The 30s
Subunit A-,P-, And E-Site Trnas And Paromomycin For
Molecule Ii.
gi|237823531|pdb|2WH1|C Chain C, Insights Into Translational Termination From The Structure
Of Rf2 Bound To The Ribosome
gi|237823590|pdb|2WH3|C Chain C, Insights Into Translational Termination From The Structure
Of Rf2 Bound To The Ribosome). This File Contains The
30s Subunit.
gi|260099988|pdb|3HUW|C Chain C, Structure Of Ef-P Bound To The 70s Ribosome; This File
Contains The 30s Subunit, Mrna, P-Site Trna And Ef-P For
Molecule I.
gi|260100044|pdb|3HUY|C Chain C, Structure Of Ef-P Bound To The 70s Ribosome; This File
Contains The 30s Subunit, Mrna, P-Site Trna And Ef-P For
Molecule Ii.
gi|261824486|pdb|2WRI|C Chain C, The Structure Of The Ribosome With Elongation Factor G
Trapped In The Post-Translocational State (Part 1 Of 4).
gi|261824548|pdb|2WRK|C Chain C, The Structure Of The Ribosome With Elongation Factor G
Trapped In The Post-Translocational State (Part 3 Of 4).
gi|261824610|pdb|2WRN|C Chain C, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
And Trna (Part 1 Of 4).
gi|261824669|pdb|2WRQ|C Chain C, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
And Trna (Part 3 Of 4).
gi|281307169|pdb|3KIQ|CC Chain c, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Precleavage State; Part 1 Of 4)
gi|281307227|pdb|3KIS|CC Chain c, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Precleavage State; Part 3 Of 4)
gi|281307285|pdb|3KIU|CC Chain c, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Postcleavage State; Part 1 Of 4)
gi|281307343|pdb|3KIX|CC Chain c, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Postcleavage State; Part 3 Of 4)
gi|288965606|pdb|3KNH|C Chain C, The Structures Of Viomycin Bound To The 70s Ribosome. This
File Contains The 30s Subunit For Molecule I
gi|289526684|pdb|3KNJ|C Chain C, The Structures Of Viomycin Bound To The 70s Ribosome. This
File Contains The 30s Subunit For Molecule Ii'
gi|289526709|pdb|3KNL|C Chain C, The Structures Of Capreomycin Bound To The 70s Ribosome.
This File Contains The 30s Subunit For Molecule I
gi|289526734|pdb|3KNN|C Chain C, The Structures Of Capreomycin Bound To The 70s Ribosome.
This File Contains The 30s Subunit For Molecule Ii
gi|294979506|pdb|3I8G|F Chain F, Elongation Complex Of The 70s Ribosome With Three Trnas
And Entry 3i8g Contains 30s Ribosomal Subnit.The 50s
Ribosomal Can Be Found In Pdb Entry 3i8f. Molecule B In
The Same Asym Unit Is Deposited As 3i8g (30s) And 3i8f
(50s).
gi|294979531|pdb|3I8H|F Chain F, Elongation Complex Of The 70s Ribosome With Three Trnas
And Entry 3i8h Contains 30s Ribosomal Subnit. The 50s
Ribosomal Can Be Found In Pdb Entry 3i8i. Molecule A In
The Same Asym Unit Is Deposited As 3i8f (50s) And 3i8g
(30s).
gi|294979590|pdb|3I9B|F Chain F, Initiation Complex Of 70s Ribosome With Two Trnas And
Mrna. 3i9b Contains 30s Ribosomal Subunit Of Molecule B.
The 50s Subunit Can Be Found In Pdb Entry 3i9c. Molecule
A In The S Asymmetric Unit Is Deposited As 3i9d (30s)
And 3i9e (50s)
gi|294979644|pdb|3I9D|F Chain F, Initiation Complex Of 70s Ribosome With Two Trnas And
Mrna. 3i9d Contains 30s Ribosomal Subunit Of Molecule A.
The 50s Subunit Can Be Found In Pdb Entry 3i9e. Molecule
B In The S Asymmetric Unit Is Deposited As 3i9b (30s)
And 3i9c (50s)
gi|295982077|pdb|2X9R|C Chain C, Structure Of The 70s Ribosome Bound To Release Factor 2
And A Substrate Analog Provides Insights Into Catalysis
Of Peptide Release
gi|295982136|pdb|2X9T|C Chain C, Structure Of The 70s Ribosome Bound To Release Factor 2
And A Substrate Analog Provides Insights Into Catalysis
Of Peptide Release
gi|307567964|pdb|2XFZ|C Chain C, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
70s Ribosome (Part 1 Of 4)
gi|307568022|pdb|2XG1|C Chain C, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
70s Ribosome (Part 3 Of 4)
gi|307776614|pdb|3OTO|C Chain C, Crystal Structure Of The 30s Ribosomal Subunit From A Ksga
Mutant Of Thermus Thermophilus (Hb8)
gi|309320237|pdb|3OGE|C Chain C, Structure Of The Thermus Thermophilus Ribosome Complexed
With Chloramphenicol. This File Contains The 30s Subunit
Of One 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes.
gi|309320258|pdb|3OGY|C Chain C, Structure Of The Thermus Thermophilus Ribosome Complexed
With Chloramphenicol. This File Contains The 30s Subunit
Of One 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes.
gi|309320339|pdb|3OHC|C Chain C, Structure Of The Thermus Thermophilus Ribosome Complexed
With Erythromycin. This File Contains The 30s Subunit Of
One 70s Ribosome. The Entire Crystal Structure Contains
Two 70s Ribosomes.
gi|309320360|pdb|3OHD|C Chain C, Structure Of The Thermus Thermophilus Ribosome Complexed
With Erythromycin. This File Contains The 30s Subunit Of
One 70s Ribosome. The Entire Crystal Structure Contains
Two 70s Ribosomes.
gi|309320441|pdb|3OHY|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Azithromycin. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320492|pdb|3OI0|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Azithromycin. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320543|pdb|3OI2|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Telithromycin. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320594|pdb|3OI4|C Chain C, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Telithromycin. This File Contains The 30s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|312207675|pdb|2XQD|C Chain C, The Structure Of Ef-Tu And Aminoacyl-Trna Bound To The 70s
Ribosome With A Gtp Analog
gi|313754001|pdb|2XSY|C Chain C, Trna Tranlocation On The 70s Ribosome: The Pre-
Translocational Translocation Intermediate Ti(Pre)
gi|313754116|pdb|2XUY|C Chain C, Trna Tranlocation On The 70s Ribosome: The Post-
Translocational Translocation Intermediate Ti(Post)
gi|325533404|pdb|2Y0U|C Chain C, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A
Near-Cognate Codon On The 70s Ribosome
gi|325533463|pdb|2Y0W|C Chain C, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A
Near-Cognate Codon On The 70s Ribosome
gi|325533522|pdb|2Y0Y|C Chain C, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
A Near-Cognate Codon On The 70s Ribosome
gi|325533581|pdb|2Y10|C Chain C, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A
Cognate Codon On The 70s Ribosome.
gi|325533640|pdb|2Y12|C Chain C, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
A Near-Cognate Codon On The 70s Ribosome
gi|325533699|pdb|2Y14|C Chain C, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
A Cognate Codon On The 70s Ribosome.
gi|325533758|pdb|2Y16|C Chain C, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
A Cognate Codon On The 70s Ribosome.
gi|325533817|pdb|2Y18|C Chain C, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A
Cognate Codon On The 70s Ribosome.
gi|13446666|emb|CAC35062.1| ribosomal protein S3 [Thermus thermophilus HB27]
gi|46197250|gb|AAS81664.1| SSU ribosomal protein S3P [Thermus thermophilus HB27]
gi|55773068|dbj|BAD71509.1| 30S ribosomal protein S3 [Thermus thermophilus HB8]
Length = 239
Score = 258 bits (659), Expect = 5e-67, Method: Composition-based stats.
Identities = 101/215 (46%), Positives = 140/215 (65%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KI+PI FRLG+ W SRW+A +Y LL ED +IR L+ L AG+A++ IER
Sbjct: 1 MGNKIHPIGFRLGITRDWESRWYAGKKQYRHLLLEDQRIRGLLEKELYSAGLARVDIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
N + V+ A+PG++IG+ G I +R++L+ +T + L+V EV P ++A L+AQ +
Sbjct: 61 ADNVAVTVHVAKPGVVIGRGGERIRVLREELAKLTGKNVALNVQEVQNPNLSAPLVAQRV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+ERR RRA+K+AVQ M GA G KVI SGR+ GAE +RTE +GRVPL TLRA
Sbjct: 121 AEQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSGRIGGAEQARTEWAAQGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
+IDYG A+A T YG G+K Y+ L + +
Sbjct: 181 NIDYGFALARTTYGVLGVKAYIFLGEVIGGQKPKA 215
>gi|188584842|ref|YP_001916387.1| SSU ribosomal protein S3P [Natranaerobius thermophilus JW/NM-WN-LF]
gi|226697735|sp|B2A4E5|RS3_NATTJ RecName: Full=30S ribosomal protein S3
gi|179349529|gb|ACB83799.1| SSU ribosomal protein S3P [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 229
Score = 258 bits (658), Expect = 5e-67, Method: Composition-based stats.
Identities = 110/212 (51%), Positives = 149/212 (70%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI R+GV W S W+A Y L+HED+KIREY++ L A V+ I I+R
Sbjct: 1 MGQKINPIGLRIGVIKDWQSNWYAD-KNYTELVHEDIKIREYIENKLFNADVSAIQIDRA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ +++A+PG++IGK G+ +EK+R + N+T ++H++V EV PE++A L A+SI
Sbjct: 60 ANRIKVTLHTAKPGMVIGKGGSGVEKLRSDIENLTGKKVHINVMEVKTPELDAHLAAKSI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A LERRV FRRAMK+AV AMR GA G+KV+ SGRL GAE+SRTE Y EG VPLQTLRA
Sbjct: 120 AIALERRVAFRRAMKQAVGRAMRQGAKGIKVMCSGRLGGAEMSRTEWYTEGNVPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
IDYG A TAYG G+K +++ + + + D
Sbjct: 180 DIDYGMVEANTAYGQIGVKCWINKGEVLPEVD 211
>gi|304413151|ref|ZP_07394624.1| 30S ribosomal subunit protein S3 [Candidatus Regiella insecticola
LSR1]
gi|304283994|gb|EFL92387.1| 30S ribosomal subunit protein S3 [Candidatus Regiella insecticola
LSR1]
Length = 246
Score = 258 bits (658), Expect = 5e-67, Method: Composition-based stats.
Identities = 106/210 (50%), Positives = 150/210 (71%), Gaps = 1/210 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFA-RGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER 59
MGQK+NP FRLG+ W+S W+A E+ L D KIR+ L L +A V++I+IER
Sbjct: 1 MGQKVNPNGFRLGIVKDWDSTWYAVNDKEFADNLAGDKKIRQVLMEKLDKASVSRIVIER 60
Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
K+ R+ +++ARPG++IGKKG D+EK+RKK++++ +++ E+ KP++ A L+A S
Sbjct: 61 PAKSIRVTIHTARPGIVIGKKGEDVEKLRKKVTDIAAVPSQINIKEIRKPDLEAKLVADS 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
+A QLERRV+FRRAMKRAVQ+AMR GA G+++ SGRL GAE++RTE Y EGRVPL TLR
Sbjct: 121 VASQLERRVMFRRAMKRAVQNAMRAGAKGIRINVSGRLGGAEIARTEWYREGRVPLHTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVS 209
A IDY + A T YG G+KV++ + +
Sbjct: 181 ADIDYSLSEAHTTYGVIGVKVWIFKGEILG 210
>gi|227497187|ref|ZP_03927435.1| possible ribosomal protein S3 [Actinomyces urogenitalis DSM 15434]
gi|226833318|gb|EEH65701.1| possible ribosomal protein S3 [Actinomyces urogenitalis DSM 15434]
Length = 269
Score = 258 bits (658), Expect = 5e-67, Method: Composition-based stats.
Identities = 103/223 (46%), Positives = 154/223 (69%), Gaps = 5/223 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQK+NP FRLG+ SRWFA G Y + ED+KIR ++ +++AG++K+
Sbjct: 1 MGQKVNPTGFRLGITTDHRSRWFADSTKPGQRYRDFVEEDVKIRRLMEDGMERAGISKVD 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + E++R +L +T ++ L++ EV P+++A L+
Sbjct: 61 IERTRDRVRVDLHTARPGIVIGRRGAEAERLRGQLEKLTGKQVQLNILEVKSPDLDAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ IA+QL RV FRRAM++ +QSAMR GA G++V SGRL GAE+SR+E Y EGRVPL
Sbjct: 121 AQGIAEQLASRVSFRRAMRKGMQSAMRAGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
TLRA+IDYG A+T +G G+KV++ D +++ + AE
Sbjct: 181 TLRANIDYGFYEAKTTFGRLGVKVWIYKGD-MTEREFARQQAE 222
>gi|166031653|ref|ZP_02234482.1| hypothetical protein DORFOR_01353 [Dorea formicigenerans ATCC
27755]
gi|166028630|gb|EDR47387.1| hypothetical protein DORFOR_01353 [Dorea formicigenerans ATCC
27755]
Length = 217
Score = 258 bits (658), Expect = 5e-67, Method: Composition-based stats.
Identities = 97/211 (45%), Positives = 143/211 (67%), Gaps = 1/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+S+W+A ++ L ED +IR YL+ L AGV+KI IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAE-KDFADYLVEDHEIRTYLKKRLYSAGVSKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I +Y+A+PG++IGK G +IEK++ +L+ T+ ++ + + E+ +P+ +A L+A++I
Sbjct: 60 SDRVKITIYTAKPGVVIGKGGAEIEKVKGELAQFTDKKLVVDIKEIKRPDKDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE R+ FRRAMK + M+ GA GVK SGRL GA+++RTE Y EG +PLQTLRA
Sbjct: 120 ALQLENRISFRRAMKSCMSRTMKSGALGVKTSVSGRLGGADMARTEFYSEGTIPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYG A A T YG G+KV++ + + +
Sbjct: 180 DIDYGFAEANTTYGKVGVKVWIYKGEVLPER 210
>gi|262377306|ref|ZP_06070530.1| ribosomal protein S3 [Acinetobacter lwoffii SH145]
gi|262307759|gb|EEY88898.1| ribosomal protein S3 [Acinetobacter lwoffii SH145]
Length = 250
Score = 258 bits (658), Expect = 5e-67, Method: Composition-based stats.
Identities = 111/228 (48%), Positives = 159/228 (69%), Gaps = 2/228 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI RLGV N+ W+A +Y L +DL++RE+L LK A ++ ILIER
Sbjct: 1 MGQKVHPIGIRLGVVKRHNANWYANPKQYAEYLLKDLQVREFLIKKLKNAMISNILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ + +ARPG++IGKKG DIEK++++L+++ +S+NE+ +P+++A L+A++I
Sbjct: 61 TGAAKVTISTARPGIVIGKKGEDIEKLQRELTSIMGVPAQVSINEIDRPDLDARLVAEAI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV+FRRAMKRAVQ+ MR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 ASQLEKRVMFRRAMKRAVQNTMRAGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-SDSTIPA-AEHRVVEKD 226
IDY T AET YG+ G+KV++ + + PA AE R ++
Sbjct: 181 DIDYATMRAETTYGTIGVKVWIFRGEILGGMKQVMNPAPAEERPAKRG 228
>gi|187734808|ref|YP_001876920.1| ribosomal protein S3 [Akkermansia muciniphila ATCC BAA-835]
gi|226697659|sp|B2UMT3|RS3_AKKM8 RecName: Full=30S ribosomal protein S3
gi|187424860|gb|ACD04139.1| ribosomal protein S3 [Akkermansia muciniphila ATCC BAA-835]
Length = 229
Score = 258 bits (658), Expect = 5e-67, Method: Composition-based stats.
Identities = 114/222 (51%), Positives = 157/222 (70%), Gaps = 2/222 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI FRL VN W S+W+A G +Y LHEDL +R+Y++ L A V+ I+IER
Sbjct: 1 MGQKVNPIGFRLAVNKDWRSKWYATGQDYATKLHEDLVMRKYIKEQLMSAAVSSIVIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN--SEIHLSVNEVPKPEINATLIAQ 118
+ RI V++ARPGL+IG+KG +IEKIR+ L + +++++ + E+ PE +A LIA+
Sbjct: 61 WNSVRITVHTARPGLVIGRKGEEIEKIRQYLQGLCGASTQVNIDIVEIRSPETDAQLIAE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
++A QLERRV FRRAMKRAVQ AM GADG+++ +GRL GA+++R E Y EG+VPLQTL
Sbjct: 121 NVAVQLERRVSFRRAMKRAVQVAMERGADGIRIRCAGRLGGADIARAEWYREGKVPLQTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
R IDYG A A T YG G+K +V+ RDEV ++ P+
Sbjct: 181 RTPIDYGFAEARTLYGIIGVKCWVNKRDEVVSQQNSRPSGPR 222
>gi|220928213|ref|YP_002505122.1| ribosomal protein S3 [Clostridium cellulolyticum H10]
gi|219998541|gb|ACL75142.1| ribosomal protein S3 [Clostridium cellulolyticum H10]
Length = 222
Score = 258 bits (658), Expect = 6e-67, Method: Composition-based stats.
Identities = 94/218 (43%), Positives = 146/218 (66%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+G+ W+++W+A + + L ED+KIR +++ L +G+++I I+R
Sbjct: 1 MGQKVNPHGLRIGIIKDWDTKWYANDKSFSSYLVEDVKIRNFIKKKLYISGISRIEIDRA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I V +A+PGL+IGK G IE++RK++ MT + +++ E+ PE++A L+A++I
Sbjct: 61 ANKVKINVNTAKPGLVIGKGGQGIEELRKEIEKMTGKSVLINITEIKVPEMDAQLVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+R+ FRRAMK+A+ M+ GA G+K SGRL GAE++RTE Y +G +PLQTLRA
Sbjct: 121 ASQLEKRISFRRAMKQAMSRTMKLGAKGIKTACSGRLGGAEIARTEHYHDGTIPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
IDYG A A+T YG G+KV++ + + A
Sbjct: 181 DIDYGFAEADTTYGKIGVKVWIYKGEVLPAVKRDRKAE 218
>gi|323357366|ref|YP_004223762.1| ribosomal protein S3 [Microbacterium testaceum StLB037]
gi|323273737|dbj|BAJ73882.1| ribosomal protein S3 [Microbacterium testaceum StLB037]
Length = 252
Score = 258 bits (658), Expect = 6e-67, Method: Composition-based stats.
Identities = 106/226 (46%), Positives = 147/226 (65%), Gaps = 8/226 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQK+NP FRLG+ SRWF+ G Y L ED+KIR L L +AGV+ I
Sbjct: 1 MGQKVNPYGFRLGITTDHVSRWFSDSTKAGQRYADYLAEDIKIRRLLTTSLDRAGVSNIE 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + E+IR L +T +I L++ EV PE +A L+
Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEAERIRADLEKLTGKQIQLNILEVKNPEADAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ +A+QL RV FRRAM++ +Q A R GA GV++ SGRL GAE+SR+E Y EGRVPL
Sbjct: 121 AQGVAEQLTARVAFRRAMRKGLQGAQRAGAKGVRIQVSGRLGGAEMSRSEFYREGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRD----EVSDSDSTIPAA 218
TLRA+IDYG A+T +G G+KV++ D E++ + P +
Sbjct: 181 TLRANIDYGFYEAKTTFGRIGVKVWIYKGDLTNKELAREQANAPKS 226
>gi|28897037|ref|NP_796642.1| 30S ribosomal protein S3 [Vibrio parahaemolyticus RIMD 2210633]
gi|260363909|ref|ZP_05776655.1| ribosomal protein S3 [Vibrio parahaemolyticus K5030]
gi|260877955|ref|ZP_05890310.1| ribosomal protein S3 [Vibrio parahaemolyticus AN-5034]
gi|260896467|ref|ZP_05904963.1| ribosomal protein S3 [Vibrio parahaemolyticus Peru-466]
gi|262392510|ref|YP_003284364.1| 30S ribosomal protein S3p [Vibrio sp. Ex25]
gi|269964728|ref|ZP_06178966.1| 30S ribosomal protein S3 [Vibrio alginolyticus 40B]
gi|31340380|sp|Q87T07|RS3_VIBPA RecName: Full=30S ribosomal protein S3
gi|28805245|dbj|BAC58526.1| ribosomal protein S3 [Vibrio parahaemolyticus RIMD 2210633]
gi|262336104|gb|ACY49899.1| SSU ribosomal protein S3p (S3e) [Vibrio sp. Ex25]
gi|269830627|gb|EEZ84848.1| 30S ribosomal protein S3 [Vibrio alginolyticus 40B]
gi|308087268|gb|EFO36963.1| ribosomal protein S3 [Vibrio parahaemolyticus Peru-466]
gi|308090018|gb|EFO39713.1| ribosomal protein S3 [Vibrio parahaemolyticus AN-5034]
gi|308111810|gb|EFO49350.1| ribosomal protein S3 [Vibrio parahaemolyticus K5030]
gi|328471840|gb|EGF42717.1| 30S ribosomal protein S3 [Vibrio parahaemolyticus 10329]
Length = 232
Score = 258 bits (658), Expect = 6e-67, Method: Composition-based stats.
Identities = 108/224 (48%), Positives = 153/224 (68%), Gaps = 1/224 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WN+ WFA ++ L D K+R++L LK+A +++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNATWFANTKDFADNLDGDFKVRQFLTSELKKASLSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+ SI
Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDAQLVGDSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
IDY T+ A T YG GIK ++ + E+ A E + +
Sbjct: 181 DIDYATSSAHTQYGVIGIKTWIF-KGEILGGMPAANAVEPKGDK 223
>gi|228989325|ref|ZP_04149316.1| 30S ribosomal protein S3 [Bacillus pseudomycoides DSM 12442]
gi|228995507|ref|ZP_04155175.1| 30S ribosomal protein S3 [Bacillus mycoides Rock3-17]
gi|229003132|ref|ZP_04160978.1| 30S ribosomal protein S3 [Bacillus mycoides Rock1-4]
gi|229015518|ref|ZP_04172516.1| 30S ribosomal protein S3 [Bacillus cereus AH1273]
gi|229021727|ref|ZP_04178309.1| 30S ribosomal protein S3 [Bacillus cereus AH1272]
gi|229027964|ref|ZP_04184117.1| 30S ribosomal protein S3 [Bacillus cereus AH1271]
gi|229074177|ref|ZP_04207223.1| 30S ribosomal protein S3 [Bacillus cereus Rock4-18]
gi|229083436|ref|ZP_04215784.1| 30S ribosomal protein S3 [Bacillus cereus Rock3-44]
gi|229094838|ref|ZP_04225843.1| 30S ribosomal protein S3 [Bacillus cereus Rock3-29]
gi|229100915|ref|ZP_04231719.1| 30S ribosomal protein S3 [Bacillus cereus Rock3-28]
gi|229113792|ref|ZP_04243227.1| 30S ribosomal protein S3 [Bacillus cereus Rock1-3]
gi|229170967|ref|ZP_04298568.1| 30S ribosomal protein S3 [Bacillus cereus MM3]
gi|228612507|gb|EEK69728.1| 30S ribosomal protein S3 [Bacillus cereus MM3]
gi|228669663|gb|EEL25070.1| 30S ribosomal protein S3 [Bacillus cereus Rock1-3]
gi|228682494|gb|EEL36567.1| 30S ribosomal protein S3 [Bacillus cereus Rock3-28]
gi|228688581|gb|EEL42454.1| 30S ribosomal protein S3 [Bacillus cereus Rock3-29]
gi|228699869|gb|EEL52506.1| 30S ribosomal protein S3 [Bacillus cereus Rock3-44]
gi|228708947|gb|EEL61074.1| 30S ribosomal protein S3 [Bacillus cereus Rock4-18]
gi|228733352|gb|EEL84181.1| 30S ribosomal protein S3 [Bacillus cereus AH1271]
gi|228739595|gb|EEL90009.1| 30S ribosomal protein S3 [Bacillus cereus AH1272]
gi|228745805|gb|EEL95809.1| 30S ribosomal protein S3 [Bacillus cereus AH1273]
gi|228758095|gb|EEM07294.1| 30S ribosomal protein S3 [Bacillus mycoides Rock1-4]
gi|228764236|gb|EEM13115.1| 30S ribosomal protein S3 [Bacillus mycoides Rock3-17]
gi|228770403|gb|EEM18976.1| 30S ribosomal protein S3 [Bacillus pseudomycoides DSM 12442]
Length = 219
Score = 258 bits (658), Expect = 6e-67, Method: Composition-based stats.
Identities = 102/220 (46%), Positives = 144/220 (65%), Gaps = 1/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI R+GV W SRWFA +Y LLHED+KIREY+ LK + VAK+ IER
Sbjct: 1 MGQKVNPIGLRVGVIRDWESRWFAE-KDYATLLHEDIKIREYITVRLKDSAVAKVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK GT++E +RK L+ +T +H+++ EV + ++NA L+ ++I
Sbjct: 60 ANRVNVTIHTAKPGMVIGKGGTEVEALRKALNQLTGKRVHINILEVKRADLNAKLVGENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRA K+ +Q AMR GA G+K SGRL GA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLENRVSFRRAQKQVIQRAMRAGAKGIKTQVSGRLGGADIARAESYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
IDY A+T YG G+KV++ + +
Sbjct: 180 DIDYAAVEADTTYGKLGVKVWIYRGEVLPTKKKASEEGGK 219
>gi|163938124|ref|YP_001643008.1| 30S ribosomal protein S3 [Bacillus weihenstephanensis KBAB4]
gi|229009625|ref|ZP_04166851.1| 30S ribosomal protein S3 [Bacillus mycoides DSM 2048]
gi|229053962|ref|ZP_04195396.1| 30S ribosomal protein S3 [Bacillus cereus AH603]
gi|229131124|ref|ZP_04260036.1| 30S ribosomal protein S3 [Bacillus cereus BDRD-ST196]
gi|229165104|ref|ZP_04292899.1| 30S ribosomal protein S3 [Bacillus cereus AH621]
gi|163860321|gb|ABY41380.1| ribosomal protein S3 [Bacillus weihenstephanensis KBAB4]
gi|228618367|gb|EEK75397.1| 30S ribosomal protein S3 [Bacillus cereus AH621]
gi|228652337|gb|EEL08262.1| 30S ribosomal protein S3 [Bacillus cereus BDRD-ST196]
gi|228721380|gb|EEL72901.1| 30S ribosomal protein S3 [Bacillus cereus AH603]
gi|228751647|gb|EEM01447.1| 30S ribosomal protein S3 [Bacillus mycoides DSM 2048]
Length = 219
Score = 258 bits (658), Expect = 6e-67, Method: Composition-based stats.
Identities = 101/220 (45%), Positives = 144/220 (65%), Gaps = 1/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI R+G+ W SRWFA +Y LLHED+KIREY+ LK + VAK+ IER
Sbjct: 1 MGQKVNPIGLRVGIIRDWESRWFAE-KDYATLLHEDIKIREYITVRLKDSAVAKVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK GT++E +RK L+ +T +H+++ EV + ++NA L+ ++I
Sbjct: 60 ANRVNVTIHTAKPGMVIGKGGTEVEALRKALNQLTGKRVHINILEVKRADLNAKLVGENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRA K+ +Q AMR GA G+K SGRL GA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLENRVSFRRAQKQVIQRAMRAGAKGIKTQVSGRLGGADIARAESYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
IDY A+T YG G+KV++ + +
Sbjct: 180 DIDYAAVEADTTYGKLGVKVWIYRGEVLPTKKKASEEGGK 219
>gi|254517476|ref|ZP_05129532.1| ribosomal protein S3 [Clostridium sp. 7_2_43FAA]
gi|226911225|gb|EEH96426.1| ribosomal protein S3 [Clostridium sp. 7_2_43FAA]
Length = 222
Score = 258 bits (658), Expect = 6e-67, Method: Composition-based stats.
Identities = 103/219 (47%), Positives = 145/219 (66%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+GV W+++W+A + L ED KIRE+++ L AG++KI IER
Sbjct: 1 MGQKVHPHGLRVGVIKDWDAKWYASKKNFADNLIEDNKIREFVKKELFSAGISKIEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-TNSEIHLSVNEVPKPEINATLIAQS 119
K ++ +Y+A+PG+IIGK G IE ++ KL+ + N + +++ EV E NA L+A++
Sbjct: 61 AKRVKLNIYTAKPGVIIGKGGAGIEALKAKLAKVTDNKNLLINIVEVKNAEANAQLMAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA QLE+RV FRRAMK+++Q AMR GA GVK SGRL GAE++RTE Y EG +PLQTLR
Sbjct: 121 IAAQLEKRVSFRRAMKQSIQRAMRLGAKGVKTACSGRLGGAEIARTEQYHEGTIPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
A IDYG A A+T YG G+KV+V + +
Sbjct: 181 ADIDYGFAEADTTYGKIGVKVWVYNGEVLPTKKVEKKEE 219
>gi|258513646|ref|YP_003189868.1| 30S ribosomal protein S3 [Desulfotomaculum acetoxidans DSM 771]
gi|257777351|gb|ACV61245.1| ribosomal protein S3 [Desulfotomaculum acetoxidans DSM 771]
Length = 220
Score = 258 bits (658), Expect = 6e-67, Method: Composition-based stats.
Identities = 94/214 (43%), Positives = 149/214 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+G+ W ++WFA + LL ED+ IR++++ L AGV++I IER
Sbjct: 1 MGQKVNPKGLRIGIIKDWEAKWFADKKNFSGLLLEDVNIRKHIKKKLYPAGVSRIQIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I +++A+PG++IG+ GT++E +RK+L +T ++++++ E+ PEI + L+A++I
Sbjct: 61 ANRVKISIHTAKPGIVIGRGGTEVESLRKQLEKLTGKQVNINIVEIKVPEIESQLVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQ +E+R+ FRRAMK+ V AM+ GA G+++ SGRL GAE++R E Y EG+VPL TLRA
Sbjct: 121 AQAIEKRIAFRRAMKQNVSRAMKMGAKGIRIACSGRLGGAEIARAEWYSEGKVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
IDYG A A+T YG GIKV++ + + ++
Sbjct: 181 DIDYGFAEADTTYGKIGIKVWIYKGEVLPEAKKA 214
>gi|326792601|ref|YP_004310422.1| ribosomal protein S3 [Clostridium lentocellum DSM 5427]
gi|326543365|gb|ADZ85224.1| ribosomal protein S3 [Clostridium lentocellum DSM 5427]
Length = 219
Score = 258 bits (658), Expect = 6e-67, Method: Composition-based stats.
Identities = 96/211 (45%), Positives = 146/211 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W++RW+A ++ L ED KIR++++ L AG+ K+ IER
Sbjct: 1 MGQKVNPHGLRVGVIKEWDARWYADKKDFANNLVEDDKIRKFIKKKLYAAGIDKVEIERM 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ V++++PG++IGK G I+ +RK++ +T +++ +++ EV +PE A L+A++I
Sbjct: 61 SKRVRVHVHTSKPGIVIGKGGASIDLLRKEVEKLTANKVAINIVEVKRPEACAQLVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE RV FRRAMK+A+ A + GA G+KV SGRL GAE++RTE Y +G +PLQTLRA
Sbjct: 121 ALQLENRVSFRRAMKQAMGKAFKSGAKGIKVSCSGRLGGAEMARTEQYSDGNIPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
I+YG A A+T YG G+KV++ + +
Sbjct: 181 DIEYGFAEADTTYGKIGVKVWIYKGEVLPTK 211
>gi|260886882|ref|ZP_05898145.1| ribosomal protein S3 [Selenomonas sputigena ATCC 35185]
gi|330839320|ref|YP_004413900.1| ribosomal protein S3 [Selenomonas sputigena ATCC 35185]
gi|260863481|gb|EEX77981.1| ribosomal protein S3 [Selenomonas sputigena ATCC 35185]
gi|329747084|gb|AEC00441.1| ribosomal protein S3 [Selenomonas sputigena ATCC 35185]
Length = 223
Score = 258 bits (658), Expect = 6e-67, Method: Composition-based stats.
Identities = 100/220 (45%), Positives = 155/220 (70%), Gaps = 1/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+G+ W+++W+A ++ LHED+KIR+YL+ L AGV+KI ER+
Sbjct: 1 MGQKVNPNGIRIGIVKDWDAKWYAD-KDFADNLHEDIKIRKYLKDSLGAAGVSKIETERS 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ +++A+PG++IG+ G+ IE+I++ L T + ++++E+ +P+++ATL+A++I
Sbjct: 60 KNRLKLTIHTAKPGMVIGRGGSGIEQIKEGLKGKTEKTVDINISEIRQPDLDATLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERR+ FRRAMK++V MR GA G+KV SGRL GAE++R+E Y EG +PL TLRA
Sbjct: 120 AQQLERRIAFRRAMKQSVGRTMRLGAKGIKVKVSGRLGGAEIARSEAYREGSIPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
IDYGTA A T YG G+KV++ + + + + AA
Sbjct: 180 DIDYGTAEARTTYGRIGVKVWIFKGEILPEKKQSKRAAAE 219
>gi|325663056|ref|ZP_08151506.1| 30S ribosomal protein S3 [Lachnospiraceae bacterium 4_1_37FAA]
gi|331086663|ref|ZP_08335740.1| 30S ribosomal protein S3 [Lachnospiraceae bacterium 9_1_43BFAA]
gi|325470510|gb|EGC73740.1| 30S ribosomal protein S3 [Lachnospiraceae bacterium 4_1_37FAA]
gi|330409829|gb|EGG89264.1| 30S ribosomal protein S3 [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 218
Score = 257 bits (657), Expect = 7e-67, Method: Composition-based stats.
Identities = 98/212 (46%), Positives = 144/212 (67%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+S+W+A + L ED KIR +L+ L AGV+KI IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAEDK-FADYLVEDHKIRTFLKKKLYSAGVSKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+II+Y+A+PG++IGK G +IEK++ +L+ T+ ++ + + E+ +P+ +A L+A++I
Sbjct: 60 SDRVKIIIYTAKPGVVIGKGGAEIEKVKAELAKFTDKKLVVDIKEIKRPDKDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE R+ FRRAMK + M+ GA GVK SGRL GA+++RTE Y EG +PLQTLRA
Sbjct: 120 ALQLENRISFRRAMKSCMSRTMKAGALGVKTSVSGRLGGADMARTEFYSEGTIPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
IDYG A A+T YG G+KV++ + + +
Sbjct: 180 DIDYGFAEADTTYGKVGVKVWIYKGEVLPTKE 211
>gi|152060912|sp|A0LIJ6|RS3_SYNFM RecName: Full=30S ribosomal protein S3
Length = 208
Score = 257 bits (657), Expect = 7e-67, Method: Composition-based stats.
Identities = 109/209 (52%), Positives = 154/209 (73%), Gaps = 1/209 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG+ +W+SRWFA +Y L+HED KIR+Y++ L AG+AK+ IER
Sbjct: 1 MGQKVHPTGFRLGILKSWDSRWFA-TKDYAKLVHEDRKIRDYIKARLYHAGIAKVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I +++ARPG++IGKKG +IE +R+ L EI + + EV +PE++ATL+ ++I
Sbjct: 60 ANKVKIRIFTARPGIVIGKKGAEIETLRRDLERKFKREILIDIQEVRRPELDATLVGENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
+ QL RRV FRRAMKRAV +A++FGA GV+V ++GRL GAE++R E Y EGRVPL TLRA
Sbjct: 120 SLQLVRRVAFRRAMKRAVSAALKFGAKGVRVASAGRLGGAEMARREWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVS 209
IDYGTA+A T YG+ G+KV++ + +
Sbjct: 180 DIDYGTAIARTTYGAIGVKVWIFKGEVLP 208
>gi|303233154|ref|ZP_07319827.1| ribosomal protein S3 [Atopobium vaginae PB189-T1-4]
gi|302480739|gb|EFL43826.1| ribosomal protein S3 [Atopobium vaginae PB189-T1-4]
Length = 236
Score = 257 bits (657), Expect = 7e-67, Method: Composition-based stats.
Identities = 95/222 (42%), Positives = 145/222 (65%), Gaps = 3/222 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+ P FRLG+ W SRW+A Y + DL+IR+YL+ L +A ++++ IER
Sbjct: 1 MGQKVQPTGFRLGITEQWRSRWYANKGNYAKNIGGDLEIRKYLKKRLAKAALSRVEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDI---EKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117
++ + ++RPG++IGKKG +I ++++ + +H+ V E+ +P+++A L A
Sbjct: 61 GDKVKVSILTSRPGIVIGKKGGEIDDLRNDVQRIAGLPKGSVHVEVVEIKQPDLDAQLTA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
IA+QLE RV FRRA+++AVQ+A + GA G+++ SGRLNGAE+ R E EGRVPL T
Sbjct: 121 DRIAEQLEGRVAFRRAVRKAVQAATKAGAKGIRIQCSGRLNGAEMGRVEWSREGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
LRA ID+ TA A T G+ GIKV++ L +++ + PA E
Sbjct: 181 LRAKIDFATATASTTMGAVGIKVWIYLGEKLPGQPAPNPALE 222
>gi|161486819|ref|NP_722318.2| 30S ribosomal protein S3 [Streptococcus mutans UA159]
gi|27734496|sp|P59186|RS3_STRMU RecName: Full=30S ribosomal protein S3
Length = 217
Score = 257 bits (657), Expect = 7e-67, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 147/215 (68%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L A V+ I IER
Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFIQKELADAAVSTIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G +++ +R +L+ +T ++H+++ E+ P+++A L+ ++I
Sbjct: 60 VNKVNVSLHTAKPGMVIGKGGANVDALRAQLNKLTGKQVHINIVEIKSPDLDAHLVGENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE+RV FRRA K+A+Q MR GA G+K SGRLNGA+++R+E Y EG VPL TLRA
Sbjct: 120 ARQLEQRVAFRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARSEGYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDY A+T YG G+KV++ + + +T
Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEILPARKNTK 214
>gi|261250411|ref|ZP_05942986.1| SSU ribosomal protein S3p (S3e) [Vibrio orientalis CIP 102891]
gi|260938980|gb|EEX94967.1| SSU ribosomal protein S3p (S3e) [Vibrio orientalis CIP 102891]
Length = 232
Score = 257 bits (657), Expect = 7e-67, Method: Composition-based stats.
Identities = 108/224 (48%), Positives = 153/224 (68%), Gaps = 1/224 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WN+ WFA ++ L D K+R++L LK+A +++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNATWFANTKDFADNLDGDFKVRQFLTSELKKASLSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++A L+ SI
Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRTAVAKIAGVPAQINIAEVRKPELDAQLVGDSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
IDY T+ A T YG GIK ++ + E+ A E + +
Sbjct: 181 DIDYATSSAHTQYGVIGIKTWIF-KGEILGGMPAANAVEPKGDK 223
>gi|259502537|ref|ZP_05745439.1| 30S ribosomal protein S3 [Lactobacillus antri DSM 16041]
gi|259169489|gb|EEW53984.1| 30S ribosomal protein S3 [Lactobacillus antri DSM 16041]
Length = 221
Score = 257 bits (657), Expect = 7e-67, Method: Composition-based stats.
Identities = 93/219 (42%), Positives = 146/219 (66%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FR+GV W ++W+A ++ L+EDL+IR+Y++ L A V+ + IER
Sbjct: 1 MGQKINPNGFRVGVIRDWTAKWYAD-KDFANYLNEDLRIRKYIEKRLADASVSTVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G+++E +RK+L+ +T +H+++ E+ KP+++A L+ +SI
Sbjct: 60 ANRVNVSIHTAKPGMVIGKGGSEVEALRKELNKLTGKRVHINIVEIKKPDLDAHLVGESI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRAM+ A+Q AMR GA G+K +GRLNGA++SR E Y +G VPL TLRA
Sbjct: 120 ARQLEARIAFRRAMRGAMQRAMRAGAKGIKTQVAGRLNGADMSRVESYSDGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDY A T YG G+K ++ + + + +
Sbjct: 180 DIDYSWDEANTTYGVLGVKTWIYRGEVLPAKKNENDDEQ 218
>gi|225376415|ref|ZP_03753636.1| hypothetical protein ROSEINA2194_02057 [Roseburia inulinivorans DSM
16841]
gi|225211791|gb|EEG94145.1| hypothetical protein ROSEINA2194_02057 [Roseburia inulinivorans DSM
16841]
Length = 218
Score = 257 bits (657), Expect = 7e-67, Method: Composition-based stats.
Identities = 99/211 (46%), Positives = 144/211 (68%), Gaps = 1/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+S+W+A +++ LL ED IR YL+ L AGV+KI IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAE-ADFADLLVEDYNIRTYLKKKLYAAGVSKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++I+Y+A+PG++IGK G +IEKI+ ++ T+ ++ + + EV +P+ +A L+A++I
Sbjct: 60 SDRVKVIIYTAKPGVVIGKGGAEIEKIKAEVQKFTSKKLVVDIKEVKRPDRDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE RV FRRAMK + M+ GA G+K SGRL GA+++RTE Y EG +PLQTLRA
Sbjct: 120 ALQLENRVSFRRAMKSCMSRTMKSGAKGIKTSCSGRLGGADMARTEFYSEGTIPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYG A A+T YG G+KV++ + +
Sbjct: 180 DIDYGFAEADTTYGKVGVKVWIYKGEVLPTK 210
>gi|171462885|ref|YP_001796998.1| ribosomal protein S3 [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171192423|gb|ACB43384.1| ribosomal protein S3 [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 271
Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats.
Identities = 117/225 (52%), Positives = 159/225 (70%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRL V W SRW+A +++ +L ED+ +R YL+ LK A V+K++IER
Sbjct: 1 MGQKINPTGFRLAVTKNWTSRWYANNTDFAKMLKEDVDVRSYLKKKLKNASVSKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ RI +YS+RPG++IGKKG DIE +R++L +H ++ E+ KPE++A LIA SI
Sbjct: 61 AKSARITIYSSRPGVVIGKKGEDIEVLRRELQKRMGVPVHANIEEIRKPEVDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLE+R++FRRAMKRA+Q AMR GA G+K+++SGRLNGAE++R E Y EGRVPL TL+A
Sbjct: 121 TQQLEKRIMFRRAMKRAMQKAMRLGAQGIKIMSSGRLNGAEIARREWYREGRVPLHTLKA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY T+ AET YG G+KV+V D + AA+ +K
Sbjct: 181 DIDYATSEAETTYGIIGVKVWVYKGDALGRGAEAQVAAQVAEEKK 225
>gi|86739301|ref|YP_479701.1| 30S ribosomal protein S3 [Frankia sp. CcI3]
gi|123737801|sp|Q2JFH0|RS3_FRASC RecName: Full=30S ribosomal protein S3
gi|86566163|gb|ABD09972.1| SSU ribosomal protein S3P [Frankia sp. CcI3]
Length = 315
Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats.
Identities = 99/218 (45%), Positives = 149/218 (68%), Gaps = 1/218 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FRLG+ + SRW+A +Y A + ED+KIR+ + +++AG++++ IERT
Sbjct: 1 MGQKVNPHGFRLGITSEFTSRWYAD-KQYKAYVGEDVKIRKMMSRGMERAGISRVDIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PE++A L+AQ +
Sbjct: 60 QGRLRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPEVDAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++A+Q+AM+ GA G++V SGRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLSSRVSFRRAMRKAMQTAMKGGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
IDYG A T +G G+KV++ D V
Sbjct: 180 DIDYGFYEARTNFGRIGVKVWIYKGDIVQSRAEREAQE 217
>gi|254431944|ref|ZP_05045647.1| ribosomal protein S3 [Cyanobium sp. PCC 7001]
gi|197626397|gb|EDY38956.1| ribosomal protein S3 [Cyanobium sp. PCC 7001]
Length = 242
Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats.
Identities = 98/231 (42%), Positives = 141/231 (61%), Gaps = 5/231 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KI+P RLG+ SRW+A Y LL ED +IR+++ AG++ +LI R
Sbjct: 1 MGHKIHPTGLRLGITQDHRSRWYAPSKTYPTLLQEDDRIRKFIHKKYGAAGISDVLIARK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIA 117
+ + +ARPG+++G++G+ IE +R +K N ++ ++V EV + + +A L+A
Sbjct: 61 ADQLEVELKTARPGVLVGRQGSGIEDLRNGIQKTVGDANRQVRINVVEVERVDADAFLLA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ IAQQLE+RV FRR ++ AVQ A R G G+K+ SGRLNGAE++RTE EGRVPL T
Sbjct: 121 EYIAQQLEKRVAFRRVIRMAVQRAQRAGVLGLKIQVSGRLNGAEIARTEWTREGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP--AAEHRVVEKD 226
LRA IDY T +A T YG GIKV+V + + +P AA R +
Sbjct: 181 LRADIDYATKLASTTYGVLGIKVWVFKGEVLPGQKEQLPVGAAPRRRTSRQ 231
>gi|300782614|ref|YP_003762905.1| 30S ribosomal protein S3 [Amycolatopsis mediterranei U32]
gi|299792128|gb|ADJ42503.1| small subunit ribosomal protein S3 [Amycolatopsis mediterranei U32]
Length = 279
Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats.
Identities = 99/228 (43%), Positives = 149/228 (65%), Gaps = 6/228 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG+ W SRW+A +Y + ED+KIR+ L +++AG++K+ IERT
Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYAEYVAEDVKIRKLLATGMERAGISKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PE +A L+AQ++
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGALEKLTKKQVQLNILEVKNPEADAQLVAQAV 119
Query: 121 AQQLERRVVFRRAMKRAVQ-SAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+Q S G++V GRL GAE+SR+E Y +GRVPL TLR
Sbjct: 120 AEQLSNRVAFRRAMRKAIQTSMRSPQVKGIRVQCGGRLGGAEMSRSEHYRDGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
A IDYG A+T +G G+KV++ + V + A E R + +
Sbjct: 180 ADIDYGFFEAKTTFGRIGVKVWIYKGELVGG----LKAREARDAAERA 223
>gi|320094574|ref|ZP_08026340.1| 30S ribosomal protein S3 [Actinomyces sp. oral taxon 178 str.
F0338]
gi|319978489|gb|EFW10066.1| 30S ribosomal protein S3 [Actinomyces sp. oral taxon 178 str.
F0338]
Length = 270
Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats.
Identities = 102/224 (45%), Positives = 152/224 (67%), Gaps = 5/224 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQK+NP FRLG+ SRWF+ G Y + ED+ IR+ L +L++AG+AK+
Sbjct: 1 MGQKVNPTGFRLGITTDHRSRWFSDSTTKGQRYSDYVAEDVAIRKALTDNLERAGIAKVD 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + +++R+ L +T ++ L++ EV P+++A L+
Sbjct: 61 IERTRDRVRVDLHTARPGIVIGRRGAEADRLRQSLEKLTGKQVQLNILEVKNPDLDAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ IA+QL RV FRRAM++ +QSA R GA G++V SGRL GAE+SR+E Y EGRVPL
Sbjct: 121 AQGIAEQLAARVSFRRAMRKGIQSAQRAGAKGIRVQVSGRLGGAEMSRSEFYREGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
TLRA+IDYG A T +G G+KV++ D +++ + AE
Sbjct: 181 TLRANIDYGFHEARTTFGRIGVKVWIYKGD-ITEREFARQQAEQ 223
>gi|328958722|ref|YP_004376108.1| 30S ribosomal protein S3 [Carnobacterium sp. 17-4]
gi|328675046|gb|AEB31092.1| 30S ribosomal protein S3 [Carnobacterium sp. 17-4]
Length = 218
Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats.
Identities = 97/219 (44%), Positives = 149/219 (68%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP R+G+ W+S+W+A ++ LHED+ IREY+ L +A V+K+ IER
Sbjct: 1 MGQKINPTGLRVGIIRDWDSKWYAE-KDFANFLHEDIAIREYIAKKLSEASVSKVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ V++A+PG++IGK G++++ +RKKL+++T +H+++ E+ +P+++A L+A+ I
Sbjct: 60 ANRVNVSVHTAKPGMVIGKGGSEVDALRKKLNDLTGKRVHINIVEIKRPDLDAKLVAEGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE RV FRRA K+A+Q MR GA G+K + SGRLNGA+++R+E + EG VPL TLRA
Sbjct: 120 ASQLESRVAFRRAQKQAIQRTMRSGAKGIKTMVSGRLNGADIARSETHSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDY A T YG GIKV++ + + +T +
Sbjct: 180 DIDYAWEEAATTYGKLGIKVWIYRGEVLPAKKNTEKGGK 218
>gi|239787569|emb|CAX84037.1| 30S ribosomal protein S3 [uncultured bacterium]
Length = 214
Score = 257 bits (657), Expect = 8e-67, Method: Composition-based stats.
Identities = 114/216 (52%), Positives = 159/216 (73%), Gaps = 2/216 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG+ TW++RW+A + +LL ED+K+RE+++ L+ A V+KI+IER
Sbjct: 1 MGQKVHPTGFRLGITKTWDTRWYAD-KAFASLLLEDIKLREWIKKRLEHASVSKIIIERP 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K RI +++ARPG+IIGKKG DIEK++ ++ + N+E+ +++ EV KPE A LIA+++
Sbjct: 60 AKKARINIHTARPGIIIGKKGADIEKLKNDIAKVANTEVAINIVEVRKPEAEAQLIAENV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQL RRV FRRAMKRAV SAMR GA G+++ +GRL G E++RTE Y EGRVPL TLRA
Sbjct: 120 AQQLVRRVAFRRAMKRAVTSAMRLGAMGIRINCAGRLGGGEIARTEWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
I+YG A A T YG G+KV+V + E+ D + P
Sbjct: 180 DIEYGFADANTTYGVIGVKVWVF-KGEIIDREIRRP 214
>gi|312866522|ref|ZP_07726739.1| ribosomal protein S3 [Streptococcus downei F0415]
gi|311097953|gb|EFQ56180.1| ribosomal protein S3 [Streptococcus downei F0415]
Length = 217
Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 145/215 (67%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+GV W+++W+A EY LHEDL IR+++ L A V+ + IER
Sbjct: 1 MGQKVHPIGMRVGVIRDWDAKWYAE-KEYADYLHEDLAIRKFISKELADASVSTVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G +++ +R KL+ +T ++H+++ E+ P+++A L+ ++I
Sbjct: 60 VNKVIVSLHTAKPGMVIGKGGANVDALRAKLNKLTGKQVHINIVEIKAPDLDAHLVGENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE+RV FRRA K+A+Q MR GA G+K SGRLNGA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLEQRVAFRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDY A+T YG G+KV++ + + +T
Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTK 214
>gi|306832553|ref|ZP_07465693.1| 30S ribosomal protein S3 [Streptococcus bovis ATCC 700338]
gi|304425311|gb|EFM28437.1| 30S ribosomal protein S3 [Streptococcus bovis ATCC 700338]
Length = 217
Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 148/215 (68%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L A V++I IER
Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFIQTELADASVSRIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G +++ +R KL+ +T ++H+++ E+ +P+++A L+ ++I
Sbjct: 60 VNKVIVSLHTAKPGMVIGKGGANVDALRAKLNKLTGKQVHINIVEIKQPDLDAHLVGENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
+QLE+RV FRRA K+A+Q MR GA G+K SGRLNGA+++R+E Y EG VPL TLRA
Sbjct: 120 VRQLEQRVAFRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARSEGYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDY A+T YG G+KV++ + + +T
Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTK 214
>gi|257866535|ref|ZP_05646188.1| ribosomal protein S3 [Enterococcus casseliflavus EC30]
gi|257872950|ref|ZP_05652603.1| ribosomal protein S3 [Enterococcus casseliflavus EC10]
gi|257876139|ref|ZP_05655792.1| ribosomal protein S3 [Enterococcus casseliflavus EC20]
gi|325567370|ref|ZP_08144037.1| 30S ribosomal protein S3 [Enterococcus casseliflavus ATCC 12755]
gi|257800493|gb|EEV29521.1| ribosomal protein S3 [Enterococcus casseliflavus EC30]
gi|257807114|gb|EEV35936.1| ribosomal protein S3 [Enterococcus casseliflavus EC10]
gi|257810305|gb|EEV39125.1| ribosomal protein S3 [Enterococcus casseliflavus EC20]
gi|325158803|gb|EGC70949.1| 30S ribosomal protein S3 [Enterococcus casseliflavus ATCC 12755]
Length = 218
Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats.
Identities = 96/219 (43%), Positives = 149/219 (68%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+G+ W+++W+A EY LHEDLKIR+++ L A V+ + IER
Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYAEFLHEDLKIRKFIASKLADAAVSTVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK G+++E +RK+L+++T +H+++ E+ KP+++A L+ + I
Sbjct: 60 ANRVNISIHTAKPGMVIGKGGSEVENLRKELNSLTGKRVHINIVEIKKPDLDAKLVGEGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRA K+A+Q MR GA G+K SGRLNGA+++R+E Y EG VPL TLRA
Sbjct: 120 ARQLENRVAFRRAQKQAIQRTMRSGAKGIKTQVSGRLNGADIARSEGYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDY A+T YG G+KV++ + + +T +
Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPTKKNTEKGGK 218
>gi|237786389|ref|YP_002907094.1| 30S ribosomal protein S3 [Corynebacterium kroppenstedtii DSM 44385]
gi|259495239|sp|C4LL46|RS3_CORK4 RecName: Full=30S ribosomal protein S3
gi|237759301|gb|ACR18551.1| 30S ribosomal protein S3 [Corynebacterium kroppenstedtii DSM 44385]
Length = 249
Score = 257 bits (657), Expect = 9e-67, Method: Composition-based stats.
Identities = 103/216 (47%), Positives = 148/216 (68%), Gaps = 2/216 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P RLG+ W SRW+A +Y L ED+KIR++L L++AG+A ++IERT
Sbjct: 1 MGQKIHPYGLRLGITSEWRSRWYAD-KQYADYLAEDIKIRDFLSKGLERAGIADVVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR KL +T ++ L++ EV + +A L+AQSI
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGKLEKLTGKQVQLNILEVKNVDASAQLVAQSI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+Q AM + G+KV+ SGRL GAE+ RTE Y EGRVPL TLR
Sbjct: 120 AEQLSNRVAFRRAMRKAIQGAMRQPQVKGIKVVCSGRLGGAEMGRTERYHEGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
A IDYGT A T +G G+KV++ D V ++
Sbjct: 180 AEIDYGTFEAHTTFGRIGVKVWIYKGDVVGGRRESL 215
>gi|210623194|ref|ZP_03293633.1| hypothetical protein CLOHIR_01583 [Clostridium hiranonis DSM 13275]
gi|210153731|gb|EEA84737.1| hypothetical protein CLOHIR_01583 [Clostridium hiranonis DSM 13275]
Length = 263
Score = 257 bits (656), Expect = 9e-67, Method: Composition-based stats.
Identities = 102/223 (45%), Positives = 147/223 (65%), Gaps = 1/223 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR-GSEYGALLHEDLKIREYLQCHLKQAGVAKILIER 59
MGQK+NP R+GV W+SRWF G E+G+ + ED IR++L+ L AGVAKI IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWFTNNGKEFGSFILEDHNIRKFLKKKLYSAGVAKIEIER 60
Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
+ ++ ++ A+PG++IG+ GT+IE ++ +L +T + +++ EV + +A L+A++
Sbjct: 61 SANKVKLDLHVAKPGVVIGRAGTEIEALKAELEKLTGKTVIVNIVEVKNVDRDAQLVAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA +ERRV FRRAMK+ +Q AM+ GA G+KV ASGRL GAE++RTE Y EG VPLQTLR
Sbjct: 121 IAAAIERRVAFRRAMKQGIQRAMKSGAKGIKVAASGRLGGAEMARTEGYSEGNVPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
+ IDYG A A+T YG GIKV++ + +
Sbjct: 181 SDIDYGFAEADTTYGKIGIKVWICNGEVLPTKHVPGADPRPER 223
>gi|296875398|ref|ZP_06899472.1| 30S ribosomal protein S3 [Streptococcus parasanguinis ATCC 15912]
gi|312866953|ref|ZP_07727164.1| ribosomal protein S3 [Streptococcus parasanguinis F0405]
gi|322390666|ref|ZP_08064180.1| 30S ribosomal protein S3 [Streptococcus parasanguinis ATCC 903]
gi|296433591|gb|EFH19364.1| 30S ribosomal protein S3 [Streptococcus parasanguinis ATCC 15912]
gi|311097435|gb|EFQ55668.1| ribosomal protein S3 [Streptococcus parasanguinis F0405]
gi|321142639|gb|EFX38103.1| 30S ribosomal protein S3 [Streptococcus parasanguinis ATCC 903]
Length = 217
Score = 257 bits (656), Expect = 9e-67, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 144/215 (66%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L A V+ I IER
Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFIQKELADAAVSTIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G +++ +R L+ +T ++H+++ E+ +P+++A L+ + I
Sbjct: 60 VNKVNVSLHTAKPGMVIGKGGANVDALRAALNKLTGKQVHINIIEIKRPDLDAHLVGEGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE+RV FRRA K+A+Q AMR GA G+K SGRLNGA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLEQRVAFRRAQKQAIQRAMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDY A+T YG G+KV++ + +
Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKDAK 214
>gi|169823858|ref|YP_001691469.1| 30S ribosomal protein S3 [Finegoldia magna ATCC 29328]
gi|302379779|ref|ZP_07268263.1| ribosomal protein S3 [Finegoldia magna ACS-171-V-Col3]
gi|303234779|ref|ZP_07321405.1| ribosomal protein S3 [Finegoldia magna BVS033A4]
gi|226697713|sp|B0RZU6|RS3_FINM2 RecName: Full=30S ribosomal protein S3
gi|167830663|dbj|BAG07579.1| 30S ribosomal protein S3 [Finegoldia magna ATCC 29328]
gi|302312367|gb|EFK94364.1| ribosomal protein S3 [Finegoldia magna ACS-171-V-Col3]
gi|302494120|gb|EFL53900.1| ribosomal protein S3 [Finegoldia magna BVS033A4]
Length = 244
Score = 257 bits (656), Expect = 9e-67, Method: Composition-based stats.
Identities = 93/210 (44%), Positives = 145/210 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+SRWFA ++G L ED KIRE ++ AG++ + IER
Sbjct: 1 MGQKVNPKGLRVGVIKDWDSRWFADKKDFGDYLVEDHKIRELIKKESFSAGISSVSIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ + +A+PG++IG++G +E+++ KL +T ++ ++V E+ +++A L+A++I
Sbjct: 61 SNKIKVTINTAKPGMVIGRQGAGVEELKNKLEKLTGKKLIINVEEIKFQDLDAQLVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR+ FRRAMK+ +Q +MR GA G+K + SGRL GA+++R+E Y EG +PLQTLRA
Sbjct: 121 ASQLERRISFRRAMKQTMQRSMRAGALGIKTMVSGRLGGADMARSEGYSEGTIPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210
IDYG A A+T YG G+KV++ + +
Sbjct: 181 AIDYGFAEADTTYGKLGVKVWLYKGEMLPG 210
>gi|312870506|ref|ZP_07730625.1| ribosomal protein S3 [Lactobacillus oris PB013-T2-3]
gi|311093968|gb|EFQ52293.1| ribosomal protein S3 [Lactobacillus oris PB013-T2-3]
Length = 221
Score = 257 bits (656), Expect = 9e-67, Method: Composition-based stats.
Identities = 93/219 (42%), Positives = 146/219 (66%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FR+GV W ++W+A ++ L+EDL+IR+Y++ L A V+ + IER
Sbjct: 1 MGQKINPNGFRVGVIRDWTAKWYAD-KDFANYLNEDLRIRKYIEKRLADASVSTVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G+++E +RK+L+ +T +H+++ E+ KP+++A L+ +SI
Sbjct: 60 ANRVNVSIHTAKPGMVIGKGGSEVEALRKELNKLTGKRVHINIVEIKKPDLDAHLVGESI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRAM+ A+Q AMR GA G+K +GRLNGA++SR E Y +G VPL TLRA
Sbjct: 120 ARQLEARIAFRRAMRGAMQRAMRAGAKGIKTQVAGRLNGADMSRVESYSDGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDY A T YG G+K ++ + + + +
Sbjct: 180 DIDYSWDEANTTYGVLGVKTWIYRGEVLPTKKNENDDEQ 218
>gi|238898921|ref|YP_002924603.1| 30S ribosomal subunit protein S3 [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
gi|259495251|sp|C4K7B2|RS3_HAMD5 RecName: Full=30S ribosomal protein S3
gi|229466681|gb|ACQ68455.1| 30S ribosomal subunit protein S3 [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
Length = 233
Score = 257 bits (656), Expect = 9e-67, Method: Composition-based stats.
Identities = 103/226 (45%), Positives = 150/226 (66%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P + RLG+ W S W+A E+ L D K+R++L L +A ++ ++IER
Sbjct: 1 MGQKVHPKIIRLGIIKYWLSTWYANTKEFAENLQGDFKVRQFLTKELSKASISHVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +Y+ARPG++IGKKG D+EK+RK+++ + ++ E+ KPE++ L+A I
Sbjct: 61 PKSIRVTIYTARPGIVIGKKGEDVEKLRKRVALIAGVPAQINTYEIRKPELDPKLVADGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV+FRRAMKRAVQ+ MR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 TSQLERRVMFRRAMKRAVQNTMRAGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDY T+ A T YG G+KV++ + + A + + ++
Sbjct: 181 DIDYDTSEAHTTYGVIGVKVWIFKGEILGTVLPFKQAEQPKQQQRK 226
>gi|302388718|ref|YP_003824539.1| SSU ribosomal protein S3P [Thermosediminibacter oceani DSM 16646]
gi|302199346|gb|ADL06916.1| SSU ribosomal protein S3P [Thermosediminibacter oceani DSM 16646]
Length = 230
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 89/218 (40%), Positives = 142/218 (65%), Gaps = 1/218 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+G+ W+SRW++ + L+ ED IR++++ AG++++ IER
Sbjct: 1 MGQKVHPHGLRIGIIRDWDSRWYSE-KNFADLVLEDFNIRKHIKNKFYTAGISRVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ +++A+PG++IGK G +E++RK L MT +I ++V E+ P++ A L+A++I
Sbjct: 60 ANRIKVTIHTAKPGMVIGKGGAGVEELRKDLEAMTGKQISINVIEIKNPDVEAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A Q+ERR+ +RRAMK+A+ A++ GA G+K + SGRL GAE++RTE Y EG +PLQ LRA
Sbjct: 120 AAQIERRISYRRAMKQAIARALKAGAKGIKTMVSGRLAGAEIARTEWYREGTIPLQKLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
I YG A A T YG G+KV++ D +
Sbjct: 180 DISYGFAEAHTTYGRIGVKVWIYRGDVLPTRKQEKQVE 217
>gi|114330580|ref|YP_746802.1| 30S ribosomal protein S3 [Nitrosomonas eutropha C91]
gi|122314426|sp|Q0AII9|RS3_NITEC RecName: Full=30S ribosomal protein S3
gi|114307594|gb|ABI58837.1| SSU ribosomal protein S3P [Nitrosomonas eutropha C91]
Length = 215
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 114/214 (53%), Positives = 159/214 (74%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRL V W+SRW+A ++ L+ED+ +R+YLQ L A V I+IER
Sbjct: 1 MGQKINPTGFRLSVLKNWSSRWYANTKKFSVFLNEDINVRQYLQKRLAHASVGSIIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+N +I ++++RPG++IGKKG DIE +RK + + N +H+++ E+ KPEI+A LIA SI
Sbjct: 61 SRNAKITIHTSRPGVVIGKKGEDIEILRKNVEKLMNVPVHINIEEIRKPEIDAQLIAASI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLEKRIMFRRAMKRAIQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
+DYGT+ A+T YG G+KV+V +++S D
Sbjct: 181 EVDYGTSEAKTTYGVIGVKVWVFKGEQLSVRDRQ 214
>gi|172040001|ref|YP_001799715.1| 30S ribosomal protein S3 [Corynebacterium urealyticum DSM 7109]
gi|226697690|sp|B1VEU2|RS3_CORU7 RecName: Full=30S ribosomal protein S3
gi|171851305|emb|CAQ04281.1| 30S ribosomal protein S3 [Corynebacterium urealyticum DSM 7109]
Length = 248
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 107/223 (47%), Positives = 150/223 (67%), Gaps = 2/223 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI P RLG+ W SRW+A +Y L ED+KIRE+L L++AG+A ++IERT
Sbjct: 1 MGQKIQPHGLRLGITSDWRSRWYAD-KQYADYLAEDIKIREFLSEGLERAGIANVVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
H R+ +++ARPG++IG++G++ ++IR KL +T ++ L++ EV + NA L+AQSI
Sbjct: 60 HDRVRVDIHTARPGIVIGRRGSEADRIRGKLEKLTGKQVQLNILEVKNVDANAQLVAQSI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+Q AM + G+KV+ SGRL GAE+ RTE Y EGRVPL TLR
Sbjct: 120 AEQLVNRVAFRRAMRKAIQGAMRQPQVKGIKVVCSGRLGGAEMGRTERYHEGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
A IDYGT A T +G G+KV++ D V ++ A
Sbjct: 180 AEIDYGTHEAHTTFGRIGVKVWIYKGDVVGGRRESLMNARDER 222
>gi|51894204|ref|YP_076895.1| 30S ribosomal protein S3 [Symbiobacterium thermophilum IAM 14863]
gi|61215495|sp|Q67JU9|RS3_SYMTH RecName: Full=30S ribosomal protein S3
gi|51857893|dbj|BAD42051.1| 30S ribosomal protein S3 [Symbiobacterium thermophilum IAM 14863]
Length = 267
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 100/203 (49%), Positives = 148/203 (72%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+G+ W++RW+A + LL ED+KIR+Y++ L AG+++I IER
Sbjct: 1 MGQKVHPKGLRIGIVKDWDTRWYADKRNFSDLLVEDVKIRKYIKKTLYAAGISRIEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
RIIV++A+PG++IG++G I +++ +L+ MT +I L V E+ PE++A L+A+SI
Sbjct: 61 GGRIRIIVHTAKPGMVIGRQGQGIAELQNQLAQMTGKQISLDVKEIRLPELDAQLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+R+ RRAMK+A+Q AMR GA GV++I SGR+ GAE++R+E EG VPL TLRA
Sbjct: 121 AQQLEKRMSHRRAMKQAIQRAMRLGAQGVRIIVSGRIGGAEIARSERAWEGTVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVS 203
IDYG A A+T +G G+KV++
Sbjct: 181 DIDYGFAEADTTFGKIGVKVWIY 203
>gi|145588248|ref|YP_001154845.1| ribosomal protein S3 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|189045027|sp|A4SUW7|RS3_POLSQ RecName: Full=30S ribosomal protein S3
gi|145046654|gb|ABP33281.1| SSU ribosomal protein S3P [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 275
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 115/209 (55%), Positives = 156/209 (74%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRL V W SRW+A +++ +L ED+ +R YL+ LK A V+K++IER
Sbjct: 1 MGQKINPTGFRLAVTKNWTSRWYANNTDFAKMLKEDVDVRIYLKKKLKNASVSKVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI +YS+RPG++IGKKG DIE +R++L +H+++ E+ KPE++A LIA SI
Sbjct: 61 AKNARITIYSSRPGVVIGKKGEDIEVLRRELQKRMGVPVHVNIEEIRKPEVDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNGAE++R E Y EGRVPL TL+A
Sbjct: 121 TQQLEKRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGAEIARREWYREGRVPLHTLKA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVS 209
IDY T+ AET YG G+KV+V D +
Sbjct: 181 DIDYATSEAETTYGIIGVKVWVYKGDTLG 209
>gi|20808654|ref|NP_623825.1| 30S ribosomal protein S3 [Thermoanaerobacter tengcongensis MB4]
gi|27734503|sp|Q8R7W0|RS3_THETN RecName: Full=30S ribosomal protein S3
gi|20517288|gb|AAM25429.1| Ribosomal protein S3 [Thermoanaerobacter tengcongensis MB4]
Length = 221
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 99/218 (45%), Positives = 153/218 (70%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+GV W ++W+A+ ++ +L ED+KIR Y++ L AG+ +I+IER
Sbjct: 1 MGQKVHPYGLRVGVTKDWLAKWYAKDKDFPNILVEDIKIRNYIKEKLYAAGIPQIVIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I +Y+A+PG++IGK GT ++++R++L MTN + L++ EV PE++A L+A++I
Sbjct: 61 SNRIKIDIYAAKPGMVIGKGGTGVDRLREELEKMTNKTVILNIIEVKTPELSAQLVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A Q+E+R+ +RRAMK+A+ AM+ GA G+K+ SGRL GAE++RTE Y EG VPLQTLRA
Sbjct: 121 AAQIEKRISYRRAMKQAIARAMKLGAKGIKIACSGRLAGAEIARTERYHEGVVPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
IDYG A A T YG G+KV+++ + + + A
Sbjct: 181 DIDYGFAEANTTYGKIGVKVWINKGEILPQPKKQVTAE 218
>gi|148381415|ref|YP_001255956.1| ribosomal protein S3 [Clostridium botulinum A str. ATCC 3502]
gi|153934132|ref|YP_001385790.1| 30S ribosomal protein S3 [Clostridium botulinum A str. ATCC 19397]
gi|153935588|ref|YP_001389197.1| 30S ribosomal protein S3 [Clostridium botulinum A str. Hall]
gi|226697683|sp|A7FZ63|RS3_CLOB1 RecName: Full=30S ribosomal protein S3
gi|226697686|sp|A5I7K0|RS3_CLOBH RecName: Full=30S ribosomal protein S3
gi|148290899|emb|CAL85035.1| 30S ribosomal protein S3 [Clostridium botulinum A str. ATCC 3502]
gi|152930176|gb|ABS35676.1| 30S ribosomal protein S3 [Clostridium botulinum A str. ATCC 19397]
gi|152931502|gb|ABS37001.1| 30S ribosomal protein S3 [Clostridium botulinum A str. Hall]
Length = 223
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 102/220 (46%), Positives = 147/220 (66%), Gaps = 1/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+GV W+++W+A + L ED KIR +++ + AGV++I IER
Sbjct: 1 MGQKVHPHGLRVGVIKEWDAKWYADKKNFADNLVEDHKIRNFVKKNSYAAGVSRIEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT-NSEIHLSVNEVPKPEINATLIAQS 119
K ++ +Y+A+PG+IIGK G IE ++ KL + N I +++ EV +PE +A LIA++
Sbjct: 61 AKRIKLNIYTAKPGMIIGKGGQGIESLKNKLQKIVSNKNILINIVEVKRPEADAQLIAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IAQQLE+R+ FRRAMK+++Q AMR G G+K SGRL GAE++RTE Y EG +PLQTLR
Sbjct: 121 IAQQLEKRIAFRRAMKQSIQRAMRSGVKGIKTACSGRLAGAEIARTEHYNEGTIPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
A IDYG A A+T YG G+KV+V + + + E
Sbjct: 181 ADIDYGFAEADTTYGKIGVKVWVYKGEVLPARKNINEKEE 220
>gi|170756663|ref|YP_001783115.1| 30S ribosomal protein S3 [Clostridium botulinum B1 str. Okra]
gi|226697687|sp|B1IGE8|RS3_CLOBK RecName: Full=30S ribosomal protein S3
gi|169121875|gb|ACA45711.1| 30S ribosomal protein S3 [Clostridium botulinum B1 str. Okra]
Length = 223
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 101/220 (45%), Positives = 147/220 (66%), Gaps = 1/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+GV W+++W+A + L ED KIR +++ + AGV++I IER
Sbjct: 1 MGQKVHPHGLRVGVIKEWDAKWYADKKNFADNLVEDHKIRNFVKKNSYAAGVSRIEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT-NSEIHLSVNEVPKPEINATLIAQS 119
K ++ +Y+A+PG+IIGK G IE ++ KL + N I +++ EV +PE +A LIA++
Sbjct: 61 AKRIKLNIYTAKPGMIIGKGGQGIESLKNKLQKIVSNKNILINIVEVKRPEADAQLIAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IAQQLE+R+ FRRAMK+++Q AM+ G G+K SGRL GAE++RTE Y EG +PLQTLR
Sbjct: 121 IAQQLEKRIAFRRAMKQSIQRAMKSGVKGIKTACSGRLGGAEIARTEHYNEGTIPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
A IDYG A A+T YG G+KV+V + + + E
Sbjct: 181 ADIDYGFAEADTTYGKIGVKVWVYKGEVLPARKNINEKEE 220
>gi|291544466|emb|CBL17575.1| SSU ribosomal protein S3P [Ruminococcus sp. 18P13]
Length = 260
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 102/236 (43%), Positives = 148/236 (62%), Gaps = 10/236 (4%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+SRWFA +++G L ED +R +++ L AGV KI IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWFANKADFGDTLVEDYNVRNFIKKSLYAAGVPKIEIERF 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ RI ++ A+PG++IG+ G +IEK+R +L M ++ +++ EV +P++NA L+A+ I
Sbjct: 61 AEKVRINIHCAKPGVVIGRGGAEIEKLRAQLEAMMKKQVAVNIIEVKQPDMNAQLVAEKI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A LE RV FRRAMK+++ +MR GA G+K SGRL GAE++R+E Y EG +PLQT+RA
Sbjct: 121 ALDLENRVSFRRAMKQSIGRSMRLGAKGIKTRVSGRLGGAEIARSETYHEGTIPLQTIRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS----------DSTIPAAEHRVVEKD 226
IDYGTA A T YG G+KV++ + + P A +D
Sbjct: 181 DIDYGTAEAHTTYGRLGVKVWIYKGEVLKGDAAKAAAEKAKYEKKPEARPERKRRD 236
>gi|187776582|ref|ZP_02993055.1| hypothetical protein CLOSPO_00096 [Clostridium sporogenes ATCC
15579]
gi|187775241|gb|EDU39043.1| hypothetical protein CLOSPO_00096 [Clostridium sporogenes ATCC
15579]
Length = 223
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 101/220 (45%), Positives = 146/220 (66%), Gaps = 1/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+GV W+++W+A + L ED KIR +++ + AGV++I IER
Sbjct: 1 MGQKVHPHGLRVGVIKEWDAKWYADKKNFADNLVEDHKIRNFVKKNSYAAGVSRIEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT-NSEIHLSVNEVPKPEINATLIAQS 119
K ++ +Y+A+PG+IIGK G IE ++ +L + N I +++ EV +PE +A LIA++
Sbjct: 61 AKRIKLNIYTAKPGMIIGKGGQGIESLKNQLQKIVSNKNILINIVEVKRPEADAQLIAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IAQQLE+R+ FRRAMK+++Q AMR G G+K SGRL GAE++RTE Y EG +PLQTLR
Sbjct: 121 IAQQLEKRIAFRRAMKQSIQRAMRTGVKGIKTACSGRLAGAEIARTEHYNEGTIPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
A IDYG A A T YG G+KV+V + + + E
Sbjct: 181 ADIDYGFAEANTTYGKIGVKVWVYKGEVLPARKNINEKEE 220
>gi|251799636|ref|YP_003014367.1| ribosomal protein S3 [Paenibacillus sp. JDR-2]
gi|247547262|gb|ACT04281.1| ribosomal protein S3 [Paenibacillus sp. JDR-2]
Length = 220
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 103/215 (47%), Positives = 152/215 (70%), Gaps = 2/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ R+G+ W S+W+A G ++G LL ED+KIREYL+ LK A V+ I IER
Sbjct: 1 MGQKVNPVGLRIGIIRDWESKWYA-GKDFGDLLLEDVKIREYLKNKLKDAAVSHIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119
+ + +A+PG++IGK G+++E +R +L +T ++H++++E+ + +++A L+A+S
Sbjct: 60 ANRVNVTINTAKPGMVIGKGGSEVESLRTELGKITKGKKVHINISEIKQADLDAILVAES 119
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IAQQLERRV FRRA+K+A+Q +MR GA G+K SGRL GAE++R+E Y EG VPL TLR
Sbjct: 120 IAQQLERRVSFRRALKQAIQRSMRAGAKGIKTAVSGRLGGAEIARSEGYSEGTVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
A IDYGTA A T YG G+KV++ + +
Sbjct: 180 ADIDYGTAEAHTTYGRIGVKVWIYRGEVLPAKKKA 214
>gi|153937998|ref|YP_001392828.1| 30S ribosomal protein S3 [Clostridium botulinum F str. Langeland]
gi|189044969|sp|A7GJ68|RS3_CLOBL RecName: Full=30S ribosomal protein S3
gi|152933894|gb|ABS39392.1| 30S ribosomal protein S3 [Clostridium botulinum F str. Langeland]
gi|295320808|gb|ADG01186.1| 30S ribosomal protein S3 [Clostridium botulinum F str. 230613]
Length = 223
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 101/220 (45%), Positives = 147/220 (66%), Gaps = 1/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+GV W+++W+A + L ED KIR +++ + AGV++I IER
Sbjct: 1 MGQKVHPHGLRVGVIKEWDAKWYADKKNFADNLVEDHKIRNFVKKNSYAAGVSRIEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT-NSEIHLSVNEVPKPEINATLIAQS 119
K ++ +Y+A+PG+IIGK G IE ++ KL + N I +++ EV +PE +A LIA++
Sbjct: 61 AKRIKLNIYTAKPGMIIGKGGQGIESLKNKLQKIVSNKNILINIVEVKRPEGDAQLIAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IAQQLE+R+ FRRAMK+++Q AM+ G G+K SGRL GAE++RTE Y EG +PLQTLR
Sbjct: 121 IAQQLEKRIAFRRAMKQSIQRAMKSGVKGIKTACSGRLGGAEIARTEHYNEGTIPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
A IDYG A A+T YG G+KV+V + + + E
Sbjct: 181 ADIDYGFAEADTTYGKIGVKVWVYKGEVLPARKNINEKEE 220
>gi|228478008|ref|ZP_04062619.1| ribosomal protein S3 [Streptococcus salivarius SK126]
gi|312862467|ref|ZP_07722710.1| ribosomal protein S3 [Streptococcus vestibularis F0396]
gi|322515873|ref|ZP_08068815.1| 30S ribosomal protein S3 [Streptococcus vestibularis ATCC 49124]
gi|228250188|gb|EEK09441.1| ribosomal protein S3 [Streptococcus salivarius SK126]
gi|311102110|gb|EFQ60310.1| ribosomal protein S3 [Streptococcus vestibularis F0396]
gi|322125660|gb|EFX96987.1| 30S ribosomal protein S3 [Streptococcus vestibularis ATCC 49124]
Length = 217
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 95/215 (44%), Positives = 149/215 (69%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L A V+ I IER
Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFIQKELADASVSTIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G++++ +R +L+ +T ++H+++ E+ KP+++A L+ ++I
Sbjct: 60 VNKVIVSLHTAKPGMVIGKGGSNVDALRAQLNKLTGKQVHINIVEIKKPDLDAHLVGETI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE+RV FRRA K+A+Q AMR GA G+K SGRLNGA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLEQRVAFRRAQKQAIQRAMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDY A+T YG G+KV++ + + +T
Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTK 214
>gi|322807800|emb|CBZ05375.1| SSU ribosomal protein S3p (S3e) [Clostridium botulinum H04402 065]
Length = 223
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 100/220 (45%), Positives = 147/220 (66%), Gaps = 1/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+GV W+++W+A + L ED KIR +++ + AGV++I IER
Sbjct: 1 MGQKVHPHGLRVGVIKEWDAKWYADKKNFADNLVEDHKIRNFVKKNSYAAGVSRIEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT-NSEIHLSVNEVPKPEINATLIAQS 119
K ++ +Y+A+PG++IGK G IE ++ KL + N I +++ EV +PE +A LIA++
Sbjct: 61 AKRIKLNIYTAKPGMVIGKGGQGIESLKNKLQKIVSNKNILINIVEVKRPEADAQLIAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IAQQLE+R+ FRRAMK+++Q AM+ G G+K SGRL GAE++RTE Y EG +PLQTLR
Sbjct: 121 IAQQLEKRIAFRRAMKQSIQRAMKSGVKGIKTACSGRLAGAEIARTEHYNEGTIPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
A IDYG A A+T YG G+KV+V + + + E
Sbjct: 181 ADIDYGFAEADTTYGKIGVKVWVYKGEVLPARKNINEKEE 220
>gi|218294760|ref|ZP_03495614.1| ribosomal protein S3 [Thermus aquaticus Y51MC23]
gi|218244668|gb|EED11192.1| ribosomal protein S3 [Thermus aquaticus Y51MC23]
Length = 239
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 105/212 (49%), Positives = 142/212 (66%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KI+PI FRLG+ W SRW+A +Y LL EDL+IR+YL L AG+A++ IER
Sbjct: 1 MGNKIHPIGFRLGITRDWESRWYAGKKQYRHLLLEDLQIRDYLTKELYPAGLARVDIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
N + V+ A+PG++IG+ G I+ +R L+ +T + L+V E+ P ++A L+AQ +
Sbjct: 61 ADNVAVSVHVAKPGVVIGRGGEKIKVLRDALAKLTGKNVALNVQEIHNPNLSAPLVAQRV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+ERR RRA+K+AVQ M GA G KVI SGR+ GAE +RTE EGRVPLQTLRA
Sbjct: 121 AEQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSGRIGGAEQARTEWAAEGRVPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
+IDYG A+A T YG G+K YV L + +
Sbjct: 181 NIDYGFALARTTYGVLGVKAYVFLGEVIGGQK 212
>gi|154505163|ref|ZP_02041901.1| hypothetical protein RUMGNA_02676 [Ruminococcus gnavus ATCC 29149]
gi|153794642|gb|EDN77062.1| hypothetical protein RUMGNA_02676 [Ruminococcus gnavus ATCC 29149]
Length = 218
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 102/209 (48%), Positives = 146/209 (69%), Gaps = 1/209 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+SRW+A ++ L ED KIR +L+ L AGV+KI IER
Sbjct: 1 MGQKVNPHGLRVGVIKEWDSRWYAE-KDFADNLVEDNKIRTFLKKKLYSAGVSKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+II+Y+A+PG++IGK G++IEK++ +L+ TN ++ + + EV +P+ +A L+A++I
Sbjct: 60 SDRVKIIIYTAKPGVVIGKGGSEIEKVKAELAKFTNKKLIVDIKEVKRPDKDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE R+ FRRAMK + M+ GA GVK SGRL GA+++RTE Y EG +PLQTLRA
Sbjct: 120 AQQLENRISFRRAMKSCMSRTMKSGALGVKTSVSGRLGGADMARTEFYSEGTIPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVS 209
IDYG A A+T YG G+KV++ + +
Sbjct: 180 DIDYGFAEADTTYGKVGVKVWIYKGEVLP 208
>gi|326203890|ref|ZP_08193752.1| ribosomal protein S3 [Clostridium papyrosolvens DSM 2782]
gi|325985988|gb|EGD46822.1| ribosomal protein S3 [Clostridium papyrosolvens DSM 2782]
Length = 222
Score = 257 bits (656), Expect = 1e-66, Method: Composition-based stats.
Identities = 93/218 (42%), Positives = 145/218 (66%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+G+ W+++W+A + + L ED+KIR +++ L +G+++I I+R
Sbjct: 1 MGQKVNPHGLRIGIIKDWDTKWYANDKSFSSYLVEDVKIRNFIKKKLYISGISRIEIDRA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I V +A+PGL+IGK G IE++RK++ MT + +++ E+ PE++A L+A++I
Sbjct: 61 ANKVKINVNTAKPGLVIGKGGQGIEELRKEIEKMTGKSVLINITEIKVPEMDAQLVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+R+ FRRAMK+A+ M+ GA G+K +GRL GAE++RTE Y +G +PLQTLRA
Sbjct: 121 ASQLEKRISFRRAMKQAMSRTMKLGAKGIKTACAGRLGGAEIARTEHYHDGTIPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
IDYG A A T YG G+KV++ + + A
Sbjct: 181 DIDYGFAEANTTYGKIGVKVWIYKGEVLPAVKRDRKAE 218
>gi|167465559|ref|ZP_02330648.1| 30S ribosomal protein S3 [Paenibacillus larvae subsp. larvae
BRL-230010]
gi|322381120|ref|ZP_08055123.1| 30S ribosomal protein S3-like protein [Paenibacillus larvae subsp.
larvae B-3650]
gi|321154696|gb|EFX46967.1| 30S ribosomal protein S3-like protein [Paenibacillus larvae subsp.
larvae B-3650]
Length = 220
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 108/226 (47%), Positives = 158/226 (69%), Gaps = 8/226 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ R+GV W S+W+A ++GALL ED+KIRE+L+ LK + V+ I IER
Sbjct: 1 MGQKVSPVGLRIGVIRDWESKWYAD-KDFGALLIEDVKIREFLKNKLKDSAVSHIDIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IG+ G+++E IR ++ MT +IH++++EV PE++A L+A+SI
Sbjct: 60 ANRVNVTIHTAKPGMVIGRGGSEVEAIRAHIARMTGKKIHINISEVKNPELDAILVAESI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMK+A+Q MR GA G+KV SGRL GA+++R+E Y EG VPL TLRA
Sbjct: 120 AQQLERRVSFRRAMKQAIQRTMRAGAKGIKVTTSGRLGGADIARSEGYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDYGTA A T YG G+KV++ + + P A+ + +
Sbjct: 180 DIDYGTAEAHTTYGRTGVKVWIYRGEVL-------PTAKKKAATEG 218
>gi|257870523|ref|ZP_05650176.1| ribosomal protein S3 [Enterococcus gallinarum EG2]
gi|257804687|gb|EEV33509.1| ribosomal protein S3 [Enterococcus gallinarum EG2]
Length = 218
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 97/219 (44%), Positives = 148/219 (67%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+G+ W+++W+A EY LHEDLKIR+++ L A V+ I IER
Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYAEFLHEDLKIRKFIASKLADAAVSTIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK G+++E +RK+L+ +T +H+++ E+ KP+++A L+ + I
Sbjct: 60 ANRVNISIHTAKPGMVIGKGGSEVENLRKELNKLTGKRVHINIVEIKKPDLDAKLVGEGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRA K+A+Q MR GA G+K SGRLNGA+++R+E Y EG VPL TLRA
Sbjct: 120 ARQLENRVAFRRAQKQAIQRTMRSGAKGIKTQVSGRLNGADIARSEGYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDY A+T YG G+KV++ + + +T +
Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEILPTKKNTEKGGK 218
>gi|322386348|ref|ZP_08059978.1| 30S ribosomal protein S3 [Streptococcus cristatus ATCC 51100]
gi|321269572|gb|EFX52502.1| 30S ribosomal protein S3 [Streptococcus cristatus ATCC 51100]
Length = 217
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 95/215 (44%), Positives = 147/215 (68%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L A V+ I IER
Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFVQKELADAAVSTIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G +++ +R KL+ +T ++H+++ E+ P+++A L+ + I
Sbjct: 60 VNKVNVSLHTAKPGMVIGKGGANVDALRAKLNKLTGKQVHINIIEIKSPDLDAHLVGEGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE+RV FRRA K+A+Q AMR GA G+K SGRLNGA+++R+E Y EG VPL TLRA
Sbjct: 120 ARQLEQRVAFRRAQKQAIQRAMRAGAKGIKTQVSGRLNGADIARSEGYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDY A+T YG G+KV++ + + +T
Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTK 214
>gi|313681325|ref|YP_004059063.1| SSU ribosomal protein s3p [Sulfuricurvum kujiense DSM 16994]
gi|313154185|gb|ADR32863.1| SSU ribosomal protein S3P [Sulfuricurvum kujiense DSM 16994]
Length = 236
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 113/226 (50%), Positives = 151/226 (66%), Gaps = 2/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+NPI RLG+N W SRWF L ED KIR YL+ L AGV+ I+IERT
Sbjct: 1 MGHKVNPIGLRLGINRNWESRWFPNFKTAAVSLGEDHKIRTYLKKELYYAGVSNIVIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ + +ARPG+IIGKKG+DIEKI++ L N+ + +++ E K + +A L+A+++
Sbjct: 61 AKRLRVTIIAARPGIIIGKKGSDIEKIKESLQNLIGKPVAVNIKEEKKAQASAQLVAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV FRRAMK+ +Q+A R GA G+KV +GRL GAE++RTE YLEGRVPL TLRA
Sbjct: 121 ATQLEKRVAFRRAMKKVMQNAQRAGAKGIKVSVAGRLGGAEIARTEWYLEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDYG A A T YG GIKV++ + + + P A+ E+
Sbjct: 181 KIDYGFAEAHTTYGVIGIKVWIFKGEVL--TKGIQPEAKESKEERG 224
>gi|37912955|gb|AAR05287.1| ribosomal protein S3 [uncultured marine gamma proteobacterium
EB000-45B06]
gi|40063183|gb|AAR38020.1| ribosomal protein S3 [uncultured marine bacterium 562]
Length = 219
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 106/210 (50%), Positives = 154/210 (73%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FRLG++ N+ W+A+G ++ L +DLK+REY + +LK + ++KI +ER+
Sbjct: 1 MGQKVNPTGFRLGISKKQNANWYAKGKDFSTNLVQDLKVREYFKKNLKNSSISKIELERS 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+N + +Y++RPG+IIGK+G +I+ ++K + + +++ EV KP+++A ++A+ +
Sbjct: 61 AENFVVSIYTSRPGIIIGKRGEEIDNLKKAVQKIVKKPAQINIKEVRKPDLDAQILAEGV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV+FRRAMKR VQSA+R A GV+V SGRLNGAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLERRVMFRRAMKRTVQSALRQSAKGVRVEVSGRLNGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210
IDYGTA A T YG G+KV+V + D
Sbjct: 181 DIDYGTAEALTTYGIIGVKVWVFKGEITED 210
>gi|315640155|ref|ZP_07895277.1| 30S ribosomal protein S3 [Enterococcus italicus DSM 15952]
gi|315484132|gb|EFU74606.1| 30S ribosomal protein S3 [Enterococcus italicus DSM 15952]
Length = 218
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 95/219 (43%), Positives = 150/219 (68%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+G+ W+++W+A EY LHEDL+IR+++ L A V+ + IER
Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADFLHEDLRIRKFIASKLADAAVSTVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++ARPG++IGK G+++E +RK+L+ +T ++H+++ E+ KP+++A L+ + I
Sbjct: 60 ANRVNVSIHTARPGMVIGKGGSEVENLRKELNKLTGKKVHINIVEIKKPDLDAKLVGEGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRA K+A+Q +MR GA G+K SGRLNGA+++R+E Y EG VPL TLRA
Sbjct: 120 ARQLEGRVAFRRAQKQAIQRSMRAGAKGIKTQVSGRLNGADIARSEGYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDY A+T YG G+KV++ + + +T +
Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEILPAKKNTEKGGK 218
>gi|331091661|ref|ZP_08340495.1| 30S ribosomal protein S3 [Lachnospiraceae bacterium 2_1_46FAA]
gi|330403418|gb|EGG82977.1| 30S ribosomal protein S3 [Lachnospiraceae bacterium 2_1_46FAA]
Length = 218
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 98/212 (46%), Positives = 144/212 (67%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+S+W+A + L ED KIR +L+ L AGV+KI IERT
Sbjct: 1 MGQKVNPHGLRVGVIKEWDSKWYAEDK-FADYLVEDHKIRTFLKKKLYSAGVSKIEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+II+Y+A+PG++IGK G +IEK++ +L T+ ++ + + E+ +P+ +A L+A++I
Sbjct: 60 SDRVKIIIYTAKPGVVIGKGGAEIEKVKAELQKFTDKKLVVDIKEIKRPDKDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE R+ FRRAMK + M+ GA G+K SGRL GA+++RTE Y EG +PLQTLRA
Sbjct: 120 ALQLENRISFRRAMKSCMSRTMKSGALGIKTSVSGRLGGADMARTEFYSEGTIPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
IDYG A A+T YG G+KV++ + + +
Sbjct: 180 DIDYGFAEADTTYGKVGVKVWIYKGEVLPTKE 211
>gi|229542197|ref|ZP_04431257.1| ribosomal protein S3 [Bacillus coagulans 36D1]
gi|229326617|gb|EEN92292.1| ribosomal protein S3 [Bacillus coagulans 36D1]
Length = 219
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 101/215 (46%), Positives = 144/215 (66%), Gaps = 1/215 (0%)
Query: 2 GQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTH 61
GQK+NPI R+GV W S+W+A +Y LLHED+KIREY+ L A V+ + IER
Sbjct: 3 GQKVNPIGLRIGVIRDWESKWYAE-KDYADLLHEDIKIREYIAKRLADASVSGVEIERAA 61
Query: 62 KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIA 121
I + +A+PG++IGK G+++E +RK L+ +T +H+++ EV K +I+A L+A++IA
Sbjct: 62 NRVNITIRTAKPGMVIGKGGSEVEALRKALNALTGKRVHINIVEVKKADIDAKLVAENIA 121
Query: 122 QQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH 181
+QLE RV FRRA K+A+Q AMR GA G++ SGRL GA+++R E Y EG VPL TLRA
Sbjct: 122 RQLENRVSFRRAQKQAIQRAMRAGAKGIRTQVSGRLGGADIARAEHYSEGTVPLHTLRAD 181
Query: 182 IDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
IDY A A+T YG G+KV++ + + T
Sbjct: 182 IDYAHAEADTTYGKLGVKVWIYRGEILPAKKKTEE 216
>gi|297588197|ref|ZP_06946841.1| 30S ribosomal protein S3 [Finegoldia magna ATCC 53516]
gi|297574886|gb|EFH93606.1| 30S ribosomal protein S3 [Finegoldia magna ATCC 53516]
Length = 244
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 93/210 (44%), Positives = 144/210 (68%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+SRWFA ++ L ED KIRE ++ AG++ I IER
Sbjct: 1 MGQKVNPKGLRVGVIKDWDSRWFADKKDFSDYLVEDHKIRELIKKESFSAGISSIAIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ + +A+PG++IG++G +E+++ KL +T ++ ++V E+ +++A L+A++I
Sbjct: 61 SNKIKVTINTAKPGMVIGRQGAGVEELKNKLEKLTGKKLIINVEEIKFQDLDAQLVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR+ FRRAMK+ +Q +MR GA G+K + SGRL GA+++R+E Y EG +PLQTLRA
Sbjct: 121 ASQLERRISFRRAMKQTMQRSMRAGALGIKTMVSGRLGGADMARSEGYSEGTIPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210
IDYG A A+T YG G+KV++ + +
Sbjct: 181 AIDYGFAEADTTYGKLGVKVWLYKGEMLPG 210
>gi|116671515|ref|YP_832448.1| 30S ribosomal protein S3P [Arthrobacter sp. FB24]
gi|152060844|sp|A0JZ78|RS3_ARTS2 RecName: Full=30S ribosomal protein S3
gi|116611624|gb|ABK04348.1| SSU ribosomal protein S3P [Arthrobacter sp. FB24]
Length = 277
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 104/231 (45%), Positives = 151/231 (65%), Gaps = 4/231 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQK+NP FRLG+ S WFA G Y + ED++IR+ + +++AG+AK+
Sbjct: 1 MGQKVNPHGFRLGITTDHVSHWFADSTKAGQRYKDFVREDIRIRQLMSTGMERAGIAKVE 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV PE+ A L+
Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQVQLNILEVKNPEMEAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ +A+QL RV FRRAMK+A+QSA R GA G+++ SGRL GAE+SR+E Y EGRVPL
Sbjct: 121 AQGVAEQLTSRVAFRRAMKKAMQSAQRAGAKGIRIACSGRLGGAEMSRSEFYREGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
TLRA+IDYG A+T +G G+KV++ D S + AA S
Sbjct: 181 TLRANIDYGFYEAKTTFGRIGVKVWIYKGDVTSKELAQQAAAAPSRGRGAS 231
>gi|291535436|emb|CBL08548.1| SSU ribosomal protein S3P [Roseburia intestinalis M50/1]
Length = 218
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 98/209 (46%), Positives = 143/209 (68%), Gaps = 1/209 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+S+W+A +++ L ED IR YL+ L AGV+KI IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAE-ADFADFLVEDYNIRTYLKKKLYAAGVSKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++I+Y+A+PG++IGK G +IEKI+ ++ T+ ++ + + EV +P+ +A L+A++I
Sbjct: 60 SDRVKVIIYTAKPGVVIGKGGAEIEKIKGEVQKFTDKKLVVDIKEVKRPDRDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE RV FRRAMK + M+ GA G+K SGRL GA+++RTE Y EG +PLQTLRA
Sbjct: 120 ALQLENRVSFRRAMKSCMGRTMKSGAKGIKTSCSGRLGGADMARTEFYSEGTIPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVS 209
IDYG A A+T YG G+KV++ + +
Sbjct: 180 DIDYGFAEADTTYGKVGVKVWIYKGEVLP 208
>gi|326773969|ref|ZP_08233251.1| ribosomal protein S3 [Actinomyces viscosus C505]
gi|326636108|gb|EGE37012.1| ribosomal protein S3 [Actinomyces viscosus C505]
Length = 273
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 101/211 (47%), Positives = 148/211 (70%), Gaps = 4/211 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQK+NP FRLG+ SRWFA G Y + ED+KIR ++ +++AG++K+
Sbjct: 1 MGQKVNPTGFRLGITTDHRSRWFADSTKPGQRYRDFVEEDVKIRRLMEDGMERAGISKVD 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + E++R +L +T ++ L++ EV P+++A L+
Sbjct: 61 IERTRDRVRVDLHTARPGIVIGRRGAEAERLRGQLEKLTGKQVQLNILEVKSPDLDAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ IA+QL RV FRRAM++ +QSAMR GA G++V SGRL GAE+SR+E Y EGRVPL
Sbjct: 121 AQGIAEQLASRVSFRRAMRKGMQSAMRAGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
TLRA+IDYG A+T +G G+KV++ D
Sbjct: 181 TLRANIDYGFYEAKTTFGRLGVKVWIYKGDI 211
>gi|323490629|ref|ZP_08095834.1| 30S ribosomal protein S3 [Planococcus donghaensis MPA1U2]
gi|323395721|gb|EGA88562.1| 30S ribosomal protein S3 [Planococcus donghaensis MPA1U2]
Length = 218
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 100/219 (45%), Positives = 152/219 (69%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+PI R+G+ W S+W+A +Y LLHED+KIREY++ LK+A V+KI IER
Sbjct: 1 MGQKIHPIGMRIGIIRDWESKWYAE-KDYATLLHEDIKIREYVEARLKEASVSKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G+++E +RK+L++MT +H+++ E+ + +++A L+A+S+
Sbjct: 60 ANRVNVTIHTAKPGMVIGKGGSEVEVLRKQLNSMTGKRVHINIIEIKRADLDARLVAESV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRA K+A+Q MR GA G+K SGRL GA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLENRVSFRRAQKQAIQRTMRSGAKGIKTQVSGRLGGADIARAEHYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDY A A+T YG G+KV++ + + + +
Sbjct: 180 DIDYAHAEADTTYGKLGVKVWIYRGEVLPTKKKSEEGGK 218
>gi|72163039|ref|YP_290696.1| 30S ribosomal protein S3 [Thermobifida fusca YX]
gi|91207846|sp|Q47LJ9|RS3_THEFY RecName: Full=30S ribosomal protein S3
gi|71916771|gb|AAZ56673.1| SSU ribosomal protein S3P [Thermobifida fusca YX]
Length = 270
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 103/206 (50%), Positives = 147/206 (71%), Gaps = 1/206 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FRLGV + SRWFA Y + ED+ IR+ L +++AG++K+ IERT
Sbjct: 1 MGQKVNPHGFRLGVTTDFKSRWFAD-KLYKDYVKEDVAIRQMLTRGMERAGISKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ R+ V++ARPG++IG++G + ++IR L +TN ++ L++ EV PEI+A L+AQ +
Sbjct: 60 RERVRVDVHTARPGIVIGRRGAEADRIRANLEKLTNKQVQLNILEVKNPEIDAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++A+QSAM+ GA G++V SGRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLSSRVAFRRAMRKAIQSAMKSGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRD 206
IDYG A T +G G+KV++ +
Sbjct: 180 DIDYGFFEARTTFGRIGVKVWIYKGE 205
>gi|29374857|ref|NP_814010.1| 30S ribosomal protein S3 [Enterococcus faecalis V583]
gi|227519998|ref|ZP_03950047.1| 30S ribosomal protein S3 [Enterococcus faecalis TX0104]
gi|227555859|ref|ZP_03985906.1| 30S ribosomal protein S3 [Enterococcus faecalis HH22]
gi|229546958|ref|ZP_04435683.1| 30S ribosomal protein S3 [Enterococcus faecalis TX1322]
gi|229550547|ref|ZP_04439272.1| 30S ribosomal protein S3 [Enterococcus faecalis ATCC 29200]
gi|255971715|ref|ZP_05422301.1| ribosomal protein S3 [Enterococcus faecalis T1]
gi|255974715|ref|ZP_05425301.1| ribosomal protein S3 [Enterococcus faecalis T2]
gi|256762010|ref|ZP_05502590.1| ribosomal protein S3 [Enterococcus faecalis T3]
gi|256855169|ref|ZP_05560530.1| ribosomal protein S3 [Enterococcus faecalis T8]
gi|256956856|ref|ZP_05561027.1| ribosomal protein S3 [Enterococcus faecalis DS5]
gi|256960663|ref|ZP_05564834.1| 30S ribosomal protein S3 [Enterococcus faecalis Merz96]
gi|256964138|ref|ZP_05568309.1| 30S ribosomal protein S3 [Enterococcus faecalis HIP11704]
gi|257078526|ref|ZP_05572887.1| 30S ribosomal protein S3 [Enterococcus faecalis JH1]
gi|257081503|ref|ZP_05575864.1| ribosomal protein S3 [Enterococcus faecalis E1Sol]
gi|257084151|ref|ZP_05578512.1| 30S ribosomal protein S3 [Enterococcus faecalis Fly1]
gi|257087978|ref|ZP_05582339.1| ribosomal protein S3 [Enterococcus faecalis D6]
gi|257088655|ref|ZP_05583016.1| 30S ribosomal protein S3 [Enterococcus faecalis CH188]
gi|257417582|ref|ZP_05594576.1| ribosomal protein S3 [Enterococcus faecalis AR01/DG]
gi|257418693|ref|ZP_05595687.1| 30S ribosomal protein S3 [Enterococcus faecalis T11]
gi|257421506|ref|ZP_05598496.1| 30S ribosomal protein S3 [Enterococcus faecalis X98]
gi|293382752|ref|ZP_06628677.1| ribosomal protein S3 [Enterococcus faecalis R712]
gi|293388065|ref|ZP_06632593.1| ribosomal protein S3 [Enterococcus faecalis S613]
gi|294781057|ref|ZP_06746408.1| ribosomal protein S3 [Enterococcus faecalis PC1.1]
gi|300861815|ref|ZP_07107895.1| ribosomal protein S3 [Enterococcus faecalis TUSoD Ef11]
gi|307269093|ref|ZP_07550454.1| ribosomal protein S3 [Enterococcus faecalis TX4248]
gi|307274177|ref|ZP_07555385.1| ribosomal protein S3 [Enterococcus faecalis TX0855]
gi|307276402|ref|ZP_07557525.1| ribosomal protein S3 [Enterococcus faecalis TX2134]
gi|307278612|ref|ZP_07559682.1| ribosomal protein S3 [Enterococcus faecalis TX0860]
gi|307287008|ref|ZP_07567083.1| ribosomal protein S3 [Enterococcus faecalis TX0109]
gi|307291651|ref|ZP_07571526.1| ribosomal protein S3 [Enterococcus faecalis TX0411]
gi|312901116|ref|ZP_07760404.1| ribosomal protein S3 [Enterococcus faecalis TX0470]
gi|312904678|ref|ZP_07763833.1| ribosomal protein S3 [Enterococcus faecalis TX0635]
gi|312908647|ref|ZP_07767589.1| ribosomal protein S3 [Enterococcus faecalis DAPTO 512]
gi|312909205|ref|ZP_07768062.1| ribosomal protein S3 [Enterococcus faecalis DAPTO 516]
gi|312952613|ref|ZP_07771477.1| ribosomal protein S3 [Enterococcus faecalis TX0102]
gi|61215749|sp|Q839F8|RS3_ENTFA RecName: Full=30S ribosomal protein S3
gi|29342315|gb|AAO80081.1| ribosomal protein S3 [Enterococcus faecalis V583]
gi|227072546|gb|EEI10509.1| 30S ribosomal protein S3 [Enterococcus faecalis TX0104]
gi|227175026|gb|EEI55998.1| 30S ribosomal protein S3 [Enterococcus faecalis HH22]
gi|229304266|gb|EEN70262.1| 30S ribosomal protein S3 [Enterococcus faecalis ATCC 29200]
gi|229307886|gb|EEN73873.1| 30S ribosomal protein S3 [Enterococcus faecalis TX1322]
gi|255962733|gb|EET95209.1| ribosomal protein S3 [Enterococcus faecalis T1]
gi|255967587|gb|EET98209.1| ribosomal protein S3 [Enterococcus faecalis T2]
gi|256683261|gb|EEU22956.1| ribosomal protein S3 [Enterococcus faecalis T3]
gi|256709682|gb|EEU24729.1| ribosomal protein S3 [Enterococcus faecalis T8]
gi|256947352|gb|EEU63984.1| ribosomal protein S3 [Enterococcus faecalis DS5]
gi|256951159|gb|EEU67791.1| 30S ribosomal protein S3 [Enterococcus faecalis Merz96]
gi|256954634|gb|EEU71266.1| 30S ribosomal protein S3 [Enterococcus faecalis HIP11704]
gi|256986556|gb|EEU73858.1| 30S ribosomal protein S3 [Enterococcus faecalis JH1]
gi|256989533|gb|EEU76835.1| ribosomal protein S3 [Enterococcus faecalis E1Sol]
gi|256992181|gb|EEU79483.1| 30S ribosomal protein S3 [Enterococcus faecalis Fly1]
gi|256996008|gb|EEU83310.1| ribosomal protein S3 [Enterococcus faecalis D6]
gi|256997467|gb|EEU83987.1| 30S ribosomal protein S3 [Enterococcus faecalis CH188]
gi|257159410|gb|EEU89370.1| ribosomal protein S3 [Enterococcus faecalis ARO1/DG]
gi|257160521|gb|EEU90481.1| 30S ribosomal protein S3 [Enterococcus faecalis T11]
gi|257163330|gb|EEU93290.1| 30S ribosomal protein S3 [Enterococcus faecalis X98]
gi|291079912|gb|EFE17276.1| ribosomal protein S3 [Enterococcus faecalis R712]
gi|291082516|gb|EFE19479.1| ribosomal protein S3 [Enterococcus faecalis S613]
gi|294451860|gb|EFG20311.1| ribosomal protein S3 [Enterococcus faecalis PC1.1]
gi|300848340|gb|EFK76097.1| ribosomal protein S3 [Enterococcus faecalis TUSoD Ef11]
gi|306497270|gb|EFM66812.1| ribosomal protein S3 [Enterococcus faecalis TX0411]
gi|306501954|gb|EFM71243.1| ribosomal protein S3 [Enterococcus faecalis TX0109]
gi|306504672|gb|EFM73872.1| ribosomal protein S3 [Enterococcus faecalis TX0860]
gi|306506882|gb|EFM76029.1| ribosomal protein S3 [Enterococcus faecalis TX2134]
gi|306509139|gb|EFM78201.1| ribosomal protein S3 [Enterococcus faecalis TX0855]
gi|306514573|gb|EFM83127.1| ribosomal protein S3 [Enterococcus faecalis TX4248]
gi|310625434|gb|EFQ08717.1| ribosomal protein S3 [Enterococcus faecalis DAPTO 512]
gi|310629401|gb|EFQ12684.1| ribosomal protein S3 [Enterococcus faecalis TX0102]
gi|310632030|gb|EFQ15313.1| ribosomal protein S3 [Enterococcus faecalis TX0635]
gi|311290447|gb|EFQ69003.1| ribosomal protein S3 [Enterococcus faecalis DAPTO 516]
gi|311291788|gb|EFQ70344.1| ribosomal protein S3 [Enterococcus faecalis TX0470]
gi|315026829|gb|EFT38761.1| ribosomal protein S3 [Enterococcus faecalis TX2137]
gi|315028869|gb|EFT40801.1| ribosomal protein S3 [Enterococcus faecalis TX4000]
gi|315031145|gb|EFT43077.1| ribosomal protein S3 [Enterococcus faecalis TX0017]
gi|315036009|gb|EFT47941.1| ribosomal protein S3 [Enterococcus faecalis TX0027]
gi|315145342|gb|EFT89358.1| ribosomal protein S3 [Enterococcus faecalis TX2141]
gi|315147165|gb|EFT91181.1| ribosomal protein S3 [Enterococcus faecalis TX4244]
gi|315151077|gb|EFT95093.1| ribosomal protein S3 [Enterococcus faecalis TX0012]
gi|315153603|gb|EFT97619.1| ribosomal protein S3 [Enterococcus faecalis TX0031]
gi|315156217|gb|EFU00234.1| ribosomal protein S3 [Enterococcus faecalis TX0043]
gi|315158638|gb|EFU02655.1| ribosomal protein S3 [Enterococcus faecalis TX0312]
gi|315160734|gb|EFU04751.1| ribosomal protein S3 [Enterococcus faecalis TX0645]
gi|315165895|gb|EFU09912.1| ribosomal protein S3 [Enterococcus faecalis TX1302]
gi|315168106|gb|EFU12123.1| ribosomal protein S3 [Enterococcus faecalis TX1341]
gi|315171454|gb|EFU15471.1| ribosomal protein S3 [Enterococcus faecalis TX1342]
gi|315172688|gb|EFU16705.1| ribosomal protein S3 [Enterococcus faecalis TX1346]
gi|315573520|gb|EFU85711.1| ribosomal protein S3 [Enterococcus faecalis TX0309B]
gi|315579332|gb|EFU91523.1| ribosomal protein S3 [Enterococcus faecalis TX0630]
gi|315582132|gb|EFU94323.1| ribosomal protein S3 [Enterococcus faecalis TX0309A]
gi|323479428|gb|ADX78867.1| ribosomal protein S3 [Enterococcus faecalis 62]
gi|327534010|gb|AEA92844.1| 30S ribosomal protein S3 [Enterococcus faecalis OG1RF]
gi|329577743|gb|EGG59169.1| ribosomal protein S3 [Enterococcus faecalis TX1467]
Length = 218
Score = 256 bits (655), Expect = 1e-66, Method: Composition-based stats.
Identities = 97/219 (44%), Positives = 149/219 (68%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+G+ W+++W+A EY LHEDL+IR+++ L A V+ I IER
Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYAEFLHEDLRIRKFIATKLADAAVSTIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK G+++E +RK+L+ +T +H+++ E+ KP+++A L+ + I
Sbjct: 60 ANRVNISIHTAKPGMVIGKGGSEVENLRKELNKLTGKRVHINIVEIKKPDLDAKLVGEGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRA K+A+Q AMR GA G+K SGRLNGA+++R+E Y EG VPL TLRA
Sbjct: 120 ARQLENRVAFRRAQKQAIQRAMRAGAKGIKTQVSGRLNGADIARSEGYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDY A+T YG G+KV++ + + +T +
Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEILPTKKNTEKGGK 218
>gi|50955560|ref|YP_062848.1| 30S ribosomal protein S3 [Leifsonia xyli subsp. xyli str. CTCB07]
gi|61215511|sp|Q6AD01|RS3_LEIXX RecName: Full=30S ribosomal protein S3
gi|50952042|gb|AAT89743.1| 30S ribosomal protein S3 [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 256
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 104/231 (45%), Positives = 151/231 (65%), Gaps = 5/231 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQK+NP FRLG+ SRWF+ G Y L ED+KIR L+ L +AGV++I
Sbjct: 1 MGQKVNPYGFRLGITTDHVSRWFSDSTKKGQRYSDYLAEDVKIRTLLKTSLDRAGVSRIE 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + E+IR L ++ +I L++ EV PE +A L+
Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEAERIRADLEKLSGKQIQLNILEVKNPEADAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ IA+QL RV FRRAM++ +Q A R G+ GV++ SGRL GAE+SR+E Y EGRVPL
Sbjct: 121 AQGIAEQLAARVAFRRAMRKGLQGAQRAGSKGVRIQVSGRLGGAEMSRSEFYREGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
TLRA+IDYG A+T +G G+KV++ D +++ + A + + +
Sbjct: 181 TLRANIDYGFYEAKTTFGRLGVKVWMYKGD-ITNKELARVQANVKPSRERN 230
>gi|300779839|ref|ZP_07089695.1| 30S ribosomal protein S3 [Corynebacterium genitalium ATCC 33030]
gi|300533949|gb|EFK55008.1| 30S ribosomal protein S3 [Corynebacterium genitalium ATCC 33030]
Length = 249
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 104/221 (47%), Positives = 149/221 (67%), Gaps = 2/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P RLG+ W S W+A + Y + ED+KIRE+L +L++AG+A I+IERT
Sbjct: 1 MGQKIHPHGLRLGITADWKSHWYAD-NNYADYVAEDIKIREFLNKNLQRAGIADIVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR++L +T + L++ EV + NA L+AQS+
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRRELEKLTGKMVALNILEVKNVDANAALVAQSV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAM + G+K+ SGRL GAE+SR E Y EGRVPL TLR
Sbjct: 120 AEQLVNRVAFRRAMRKAIQSAMRQPQVKGIKIQCSGRLGGAEMSRVERYHEGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
A IDYG A AET +G G+KV++ D V + A
Sbjct: 180 AEIDYGLAEAETTFGIIGVKVWIYKGDVVGGVRESELNAPK 220
>gi|269128510|ref|YP_003301880.1| 30S ribosomal protein S3 [Thermomonospora curvata DSM 43183]
gi|268313468|gb|ACY99842.1| ribosomal protein S3 [Thermomonospora curvata DSM 43183]
Length = 272
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 102/206 (49%), Positives = 145/206 (70%), Gaps = 1/206 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG+ + SRW+A Y + ED+ IR LQ +++AG++K+ IERT
Sbjct: 1 MGQKINPHGFRLGITTDFKSRWYAD-KLYKDYVKEDVAIRRMLQKGMERAGISKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PEI+A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPEIDAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++A+QSAM+ GA G+KV SGRL GAE+SR+E Y EG+VPL TLRA
Sbjct: 120 AEQLSSRVAFRRAMRKAIQSAMKSGAKGIKVQCSGRLGGAEMSRSEFYREGQVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRD 206
IDYG A T +G G+KV++ D
Sbjct: 180 DIDYGFYEARTTFGRIGVKVWIYKGD 205
>gi|262370572|ref|ZP_06063897.1| ribosomal protein S3 [Acinetobacter johnsonii SH046]
gi|262314372|gb|EEY95414.1| ribosomal protein S3 [Acinetobacter johnsonii SH046]
Length = 250
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 111/228 (48%), Positives = 158/228 (69%), Gaps = 2/228 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI RLGV N+ W+A +Y L +DL++RE+L LK A ++ ILIER
Sbjct: 1 MGQKVHPIGIRLGVVKRHNANWYASPKQYAEYLLKDLQVREFLTKKLKNAMISNILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ + +ARPG++IGKKG DIEK++++L+ + +S+NE+ +P+++A L+A++I
Sbjct: 61 TGAAKVTISTARPGIVIGKKGEDIEKLQRELTQIMGIPAQVSINEIDRPDLDARLVAEAI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV+FRRAMKRAVQ+ MR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 121 ASQLEKRVMFRRAMKRAVQNTMRAGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-SDSTIPA-AEHRVVEKD 226
IDY T AET YG+ G+KV++ + + PA AE R ++
Sbjct: 181 DIDYSTMRAETTYGTIGVKVWIFRGEILGGMKQVMNPAPAEERPAKRG 228
>gi|300814655|ref|ZP_07094906.1| ribosomal protein S3 [Peptoniphilus sp. oral taxon 836 str. F0141]
gi|300511274|gb|EFK38523.1| ribosomal protein S3 [Peptoniphilus sp. oral taxon 836 str. F0141]
Length = 260
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 98/214 (45%), Positives = 148/214 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+S+W+A + LL ED +IR+Y++ L AG++KI IER
Sbjct: 1 MGQKVNPHGLRVGVIKNWDSKWYANKKNFSELLVEDNEIRKYIKKKLYAAGISKIEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ +Y+A+PG++IG+ G +E++RK++ +T I L+V EV P+++A L+++SI
Sbjct: 61 ANRVKVSIYTAKPGVVIGRGGAGVEELRKEVEKLTGKSIVLNVEEVKNPDVDAQLVSESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+ LERRV FRRAMK+A+Q MR GA G+K +GRL GA+++RTE Y EG +PLQTLRA
Sbjct: 121 AEALERRVSFRRAMKQAIQRTMRAGALGIKTAVAGRLGGADMARTEGYSEGTIPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
IDYG + A+T YG G+KV++ + + +
Sbjct: 181 DIDYGFSEADTTYGKLGVKVWLYKGEILPEFKEE 214
>gi|91200673|emb|CAJ73724.1| strongly similar to 30S ribosomal protein S3 [Candidatus Kuenenia
stuttgartiensis]
Length = 219
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 91/205 (44%), Positives = 139/205 (67%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+ PI FRLG+ W S W+A +G+LL ED KIR+ ++ + G+ + IERT
Sbjct: 1 MGQKVCPIGFRLGITQGWKSVWYADKKSFGSLLVEDFKIRKLIKKNYGFGGIPFVEIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +I +++ARPGLIIG+KG +++K++ +L + + + E+ KPE A L+++++
Sbjct: 61 RQEAKITLHTARPGLIIGRKGAEVDKLKDELQKYIGRVVVVKIKEINKPETYAQLVSENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLERR FRRAMK+A+++++ G G+++ SGRL GAE++RTE G VPL TLRA
Sbjct: 121 AEQLERRASFRRAMKKAMEASLNAGVKGMRIQVSGRLGGAEIARTEKITHGSVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLR 205
IDYG A A+T YG G+KV++
Sbjct: 181 DIDYGFAEAKTTYGVIGVKVWLYKG 205
>gi|168181870|ref|ZP_02616534.1| 30S ribosomal protein S3 [Clostridium botulinum Bf]
gi|237796936|ref|YP_002864488.1| 30S ribosomal protein S3 [Clostridium botulinum Ba4 str. 657]
gi|259495238|sp|C3KVP5|RS3_CLOB6 RecName: Full=30S ribosomal protein S3
gi|182674930|gb|EDT86891.1| 30S ribosomal protein S3 [Clostridium botulinum Bf]
gi|229263325|gb|ACQ54358.1| 30S ribosomal protein S3 [Clostridium botulinum Ba4 str. 657]
Length = 223
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 100/220 (45%), Positives = 147/220 (66%), Gaps = 1/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+GV W+++W+A + L ED KIR +++ + AGV++I IER
Sbjct: 1 MGQKVHPHGLRVGVIKEWDAKWYADKKNFADNLVEDHKIRNFVKKNSYAAGVSRIEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT-NSEIHLSVNEVPKPEINATLIAQS 119
K ++ +Y+A+PG+IIGK G IE ++ +L + N I +++ EV +PE +A LIA++
Sbjct: 61 AKRIKLNIYTAKPGMIIGKGGQGIESLKNQLQKIVSNKNILINIVEVKRPEADAQLIAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IAQQLE+R+ FRRAMK+++Q AM+ G G+K SGRL GAE++RTE Y EG +PLQTLR
Sbjct: 121 IAQQLEKRIAFRRAMKQSIQRAMKSGVKGIKTACSGRLAGAEIARTEHYNEGTIPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
A IDYG A A+T YG G+KV+V + + + E
Sbjct: 181 ADIDYGFAEADTTYGKIGVKVWVYKGEVLPARKNINEKEE 220
>gi|227487117|ref|ZP_03917433.1| 30S ribosomal protein S3 [Corynebacterium glucuronolyticum ATCC
51867]
gi|227541716|ref|ZP_03971765.1| 30S ribosomal protein S3 [Corynebacterium glucuronolyticum ATCC
51866]
gi|227092775|gb|EEI28087.1| 30S ribosomal protein S3 [Corynebacterium glucuronolyticum ATCC
51867]
gi|227182531|gb|EEI63503.1| 30S ribosomal protein S3 [Corynebacterium glucuronolyticum ATCC
51866]
Length = 250
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 102/221 (46%), Positives = 147/221 (66%), Gaps = 1/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P RLG+ W + W+A Y + ED+KIRE+L L +AG+A ++IERT
Sbjct: 1 MGQKIHPHGLRLGITSDWKTHWYADKKTYSEYVAEDIKIREFLDKGLDRAGIADVVIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G++ ++IR +L +T ++ L++ EV + NA L+AQSI
Sbjct: 61 RDRVRVDIHTARPGIVIGRRGSEADRIRGELEKLTGKQVALNIIEVKNIDANAQLVAQSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAM + G+KV+ +GRL GAE+SR E Y EGRVPL TLR
Sbjct: 121 AEQLSNRVAFRRAMRKAIQSAMRQPQVKGIKVVCAGRLGGAEMSRVERYHEGRVPLHTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
A IDYGT A T +G G+KV++ D V + A
Sbjct: 181 AEIDYGTFEAHTTFGRIGVKVWIYKGDVVGGRRESELNAPE 221
>gi|184200268|ref|YP_001854475.1| 30S ribosomal protein S3 [Kocuria rhizophila DC2201]
gi|226697723|sp|B2GIZ9|RS3_KOCRD RecName: Full=30S ribosomal protein S3
gi|183580498|dbj|BAG28969.1| 30S ribosomal protein S3 [Kocuria rhizophila DC2201]
Length = 277
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 101/210 (48%), Positives = 147/210 (70%), Gaps = 4/210 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE----YGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQKINP FRLG+ S W+A ++ Y + ED+KIRE + + +AG++K+
Sbjct: 1 MGQKINPNGFRLGITTDHVSHWYADSNQPGQRYKDYIREDVKIRELMSKGMDRAGISKVE 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + ++IR +L +T +I L++ EV PEI+A L+
Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQIQLNILEVKNPEIDAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ +A+QL RV FRRAMK+A+QSA R GA G+++ +GRL GAE+SR+E Y EGRVPL
Sbjct: 121 AQGVAEQLASRVAFRRAMKKAIQSAQRAGAKGIRIQCAGRLGGAEMSRSEFYREGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
TLRA+IDYG A+T +G G+KV++ D
Sbjct: 181 TLRANIDYGFFEAKTTFGRIGVKVWIYKGD 210
>gi|319945829|ref|ZP_08020079.1| 30S ribosomal protein S3 [Streptococcus australis ATCC 700641]
gi|319747894|gb|EFW00138.1| 30S ribosomal protein S3 [Streptococcus australis ATCC 700641]
Length = 217
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 92/215 (42%), Positives = 143/215 (66%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L A V+ I IER
Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFIQKELADAAVSTIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G +++ +R L+ +T ++H+++ E+ +P+++A L+ + I
Sbjct: 60 VNKVNVSLHTAKPGMVIGKGGANVDALRAALNKLTGKQVHINIIEIKRPDLDAHLVGEGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE+RV FRRA K+A+Q MR GA G+K SGRLNGA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLEQRVAFRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDY A+T YG G+KV++ + +
Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKDAK 214
>gi|257784957|ref|YP_003180174.1| 30S ribosomal protein S3 [Atopobium parvulum DSM 20469]
gi|257473464|gb|ACV51583.1| ribosomal protein S3 [Atopobium parvulum DSM 20469]
Length = 236
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 107/222 (48%), Positives = 152/222 (68%), Gaps = 4/222 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+ P FRLGV +W SRW+A +Y L DL IR+YL+ L++A VA+I IER
Sbjct: 1 MGQKVQPTGFRLGVTESWRSRWYAD-KDYAEQLGNDLAIRKYLEKRLEKAAVARIDIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDI---EKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117
++ ++SARPG++IGKKG +I ++++ + ++++ V EV +PE++A L+A
Sbjct: 60 GDKVKVTIFSARPGIVIGKKGAEIDGLRADLERVAKVGKGQVNVDVVEVKRPELDANLVA 119
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
QSIA+QLE+RV FRRAM++AVQSA + GA G+++ SGRLNGAE+ R E Y EGRVPL T
Sbjct: 120 QSIAEQLEQRVAFRRAMRKAVQSARKAGAKGIRIQCSGRLNGAEMGRREWYREGRVPLHT 179
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
LRA I YGTA T G+ GIKV++ +++ + PA E
Sbjct: 180 LRAAIGYGTATGRTTMGAVGIKVWIYFGEKMPGQPTPNPALE 221
>gi|269468081|gb|EEZ79795.1| ribosomal protein S3 [uncultured SUP05 cluster bacterium]
Length = 230
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 101/221 (45%), Positives = 153/221 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP RLG+ W+S+W+A +Y L D+++R++L LK A V++I IER
Sbjct: 1 MGQKVNPKGIRLGIIRDWDSKWYANSQDYSKYLLSDIEVRDFLFEKLKSASVSRITIERL 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
N ++ +++ARPG++IGKKG DIE+++ +S M +H+++ E+ KPE++A L+A++I
Sbjct: 61 ANNAKVTIHTARPGIVIGKKGADIEQLKAIVSKMMGITVHINIEEIKKPELDARLVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+RV++RRA+KR + +A R GA G+KV+ SGRLNGAE++R+E Y EGRVPL T RA
Sbjct: 121 AQQLEKRVMYRRAVKRVLGNATRLGAQGIKVMVSGRLNGAEIARSEWYREGRVPLHTFRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
+DY + A T YG GIKV++ + + T+ R
Sbjct: 181 DVDYSSYGANTQYGVIGIKVWIFKGEILDHKKGTLDEVARR 221
>gi|195977214|ref|YP_002122458.1| 30S ribosomal protein S3 [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|225867671|ref|YP_002743619.1| 30S ribosomal protein S3 [Streptococcus equi subsp. zooepidemicus]
gi|225869542|ref|YP_002745489.1| 30S ribosomal protein S3 [Streptococcus equi subsp. equi 4047]
gi|226697761|sp|B4U506|RS3_STREM RecName: Full=30S ribosomal protein S3
gi|254764546|sp|C0M8D5|RS3_STRE4 RecName: Full=30S ribosomal protein S3
gi|259495258|sp|C0MCB6|RS3_STRS7 RecName: Full=30S ribosomal protein S3
gi|195973919|gb|ACG61445.1| 30S ribosomal protein S3 [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|225698946|emb|CAW91978.1| 30S ribosomal protein S3 [Streptococcus equi subsp. equi 4047]
gi|225700947|emb|CAW97656.1| 30S ribosomal protein S3 [Streptococcus equi subsp. zooepidemicus]
Length = 217
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 92/215 (42%), Positives = 148/215 (68%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+G+ W+++W+A EY LHEDL IR+++ L +A V+ I IER
Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFINKELAEASVSTIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G +++ +R +L+ +T ++H+++ E+ +P+++A L+ ++I
Sbjct: 60 VNKVIVSLHTAKPGMVIGKGGANVDALRAQLNKLTGKQVHINIIEIKQPDLDAHLVGENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE+RV FRRA K+A+Q MR GA G+K SGRLNGA+++R+E Y EG VPL TLRA
Sbjct: 120 ARQLEQRVAFRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARSEGYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDY A+T YG G+KV++ + + +T
Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTK 214
>gi|170760894|ref|YP_001788815.1| 30S ribosomal protein S3 [Clostridium botulinum A3 str. Loch Maree]
gi|226950927|ref|YP_002806018.1| 30S ribosomal protein S3 [Clostridium botulinum A2 str. Kyoto]
gi|226697688|sp|B1KSL9|RS3_CLOBM RecName: Full=30S ribosomal protein S3
gi|254764523|sp|C1FMU5|RS3_CLOBJ RecName: Full=30S ribosomal protein S3
gi|169407883|gb|ACA56294.1| 30S ribosomal protein S3 [Clostridium botulinum A3 str. Loch Maree]
gi|226842155|gb|ACO84821.1| ribosomal protein S3 [Clostridium botulinum A2 str. Kyoto]
Length = 223
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 101/220 (45%), Positives = 147/220 (66%), Gaps = 1/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+GV W+++W+A + L ED KIR +++ + AGV++I IER
Sbjct: 1 MGQKVHPHGLRVGVIKEWDAKWYADKKNFADNLVEDHKIRNFVKKNSYAAGVSRIEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT-NSEIHLSVNEVPKPEINATLIAQS 119
K ++ +Y+A+PG+IIGK G IE ++ KL + N I +++ EV +PE +A LIA++
Sbjct: 61 AKRIKLNIYTAKPGMIIGKGGQGIESLKNKLQKIVSNKNILINIVEVKRPEADAQLIAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IAQQLE+R+ FRRAMK+++Q AM+ G G+K SGRL GAE++RTE Y EG +PLQTLR
Sbjct: 121 IAQQLEKRIAFRRAMKQSIQRAMKSGVKGIKTACSGRLAGAEIARTEHYNEGTIPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
A IDYG A A+T YG G+KV+V + + + E
Sbjct: 181 ADIDYGFAEADTTYGKIGVKVWVYKGEVLPARKNINEKEE 220
>gi|307720142|ref|YP_003891282.1| 30S ribosomal protein S3P [Sulfurimonas autotrophica DSM 16294]
gi|306978235|gb|ADN08270.1| SSU ribosomal protein S3P [Sulfurimonas autotrophica DSM 16294]
Length = 238
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 112/226 (49%), Positives = 148/226 (65%), Gaps = 1/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N W SRWF A L ED KIR +L+ L AGV+ I+IERT
Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPNFKTAPAALGEDHKIRTFLKKELYYAGVSNIIIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ + +ARPG+IIGKKG DIEK++ + + + +++ E K + +A L+A+++
Sbjct: 61 VKRLRVTIVAARPGIIIGKKGADIEKLKTAVQKLVGKTVSINIKEEKKAQTSAQLVAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV FRRAMK+ +Q A R GA G+KV +GRL GAE++RTE YLEGRVPL TLRA
Sbjct: 121 ATQLERRVAFRRAMKKVMQGAQRSGAKGIKVAVAGRLGGAEMARTEWYLEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDYG A A T YG G+KV++ + EV A E + +
Sbjct: 181 KIDYGFAEAHTTYGIIGVKVWIF-KGEVLTKGIPAEAKEEKKERRG 225
>gi|227530211|ref|ZP_03960260.1| 30S ribosomal protein S3 [Lactobacillus vaginalis ATCC 49540]
gi|227349886|gb|EEJ40177.1| 30S ribosomal protein S3 [Lactobacillus vaginalis ATCC 49540]
Length = 219
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 93/220 (42%), Positives = 145/220 (65%), Gaps = 1/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FR+GV W ++W+A ++ L+EDL+IR+Y++ L A V+ + IER
Sbjct: 1 MGQKINPNGFRVGVIRDWTAKWYAE-KDFANYLNEDLRIRKYIEKRLADASVSTVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G+++E +RK+L+ +T +H+++ E+ KP+++A L+ +SI
Sbjct: 60 ANRVNVSIHTAKPGMVIGKGGSEVEALRKELNKLTGKRVHINIVEIKKPDLDAHLVGESI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRAM+ A+Q AMR GA G+K +GRLNGA++SR E Y +G VPL TLRA
Sbjct: 120 ARQLEARIAFRRAMRGAMQRAMRAGAKGIKTQVAGRLNGADMSRVESYSDGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
IDY A T YG G+K ++ + + +
Sbjct: 180 DIDYSWDEANTTYGVLGVKTWIYRGEVLPTKKNNDEEGGK 219
>gi|15900151|ref|NP_344755.1| 30S ribosomal protein S3 [Streptococcus pneumoniae TIGR4]
gi|15902239|ref|NP_357789.1| 30S ribosomal protein S3 [Streptococcus pneumoniae R6]
gi|111658795|ref|ZP_01409426.1| hypothetical protein SpneT_02000092 [Streptococcus pneumoniae
TIGR4]
gi|116515402|ref|YP_815718.1| 30S ribosomal protein S3 [Streptococcus pneumoniae D39]
gi|148983614|ref|ZP_01816933.1| 30S ribosomal protein S3 [Streptococcus pneumoniae SP3-BS71]
gi|148987952|ref|ZP_01819415.1| 30S ribosomal protein S3 [Streptococcus pneumoniae SP6-BS73]
gi|148992792|ref|ZP_01822435.1| 30S ribosomal protein S3 [Streptococcus pneumoniae SP9-BS68]
gi|148996637|ref|ZP_01824355.1| 30S ribosomal protein S3 [Streptococcus pneumoniae SP11-BS70]
gi|149001679|ref|ZP_01826652.1| 30S ribosomal protein S3 [Streptococcus pneumoniae SP14-BS69]
gi|149005965|ref|ZP_01829694.1| 30S ribosomal protein S3 [Streptococcus pneumoniae SP18-BS74]
gi|149011084|ref|ZP_01832389.1| 30S ribosomal protein S3 [Streptococcus pneumoniae SP19-BS75]
gi|149017904|ref|ZP_01834363.1| 30S ribosomal protein S3 [Streptococcus pneumoniae SP23-BS72]
gi|168483851|ref|ZP_02708803.1| ribosomal protein S3 [Streptococcus pneumoniae CDC1873-00]
gi|168486019|ref|ZP_02710527.1| ribosomal protein S3 [Streptococcus pneumoniae CDC1087-00]
gi|168489692|ref|ZP_02713891.1| ribosomal protein S3 [Streptococcus pneumoniae SP195]
gi|168492168|ref|ZP_02716311.1| ribosomal protein S3 [Streptococcus pneumoniae CDC0288-04]
gi|168493908|ref|ZP_02718051.1| ribosomal protein S3 [Streptococcus pneumoniae CDC3059-06]
gi|168576358|ref|ZP_02722241.1| ribosomal protein S3 [Streptococcus pneumoniae MLV-016]
gi|169834372|ref|YP_001693747.1| 30S ribosomal protein S3 [Streptococcus pneumoniae Hungary19A-6]
gi|182683194|ref|YP_001834941.1| 30S ribosomal protein S3 [Streptococcus pneumoniae CGSP14]
gi|194398748|ref|YP_002036916.1| 30S ribosomal protein S3 [Streptococcus pneumoniae G54]
gi|221231119|ref|YP_002510271.1| 30S ribosomal protein S3 [Streptococcus pneumoniae ATCC 700669]
gi|225853821|ref|YP_002735333.1| 30S ribosomal protein S3 [Streptococcus pneumoniae JJA]
gi|225855980|ref|YP_002737491.1| 30S ribosomal protein S3 [Streptococcus pneumoniae P1031]
gi|225858069|ref|YP_002739579.1| 30S ribosomal protein S3 [Streptococcus pneumoniae 70585]
gi|225860257|ref|YP_002741766.1| 30S ribosomal protein S3 [Streptococcus pneumoniae Taiwan19F-14]
gi|237649717|ref|ZP_04523969.1| 30S ribosomal protein S3 [Streptococcus pneumoniae CCRI 1974]
gi|237821415|ref|ZP_04597260.1| 30S ribosomal protein S3 [Streptococcus pneumoniae CCRI 1974M2]
gi|270292006|ref|ZP_06198221.1| ribosomal protein S3 [Streptococcus sp. M143]
gi|293364341|ref|ZP_06611067.1| 30S ribosomal protein S3 [Streptococcus oralis ATCC 35037]
gi|298230372|ref|ZP_06964053.1| 30S ribosomal protein S3 [Streptococcus pneumoniae str. Canada
MDR_19F]
gi|298255993|ref|ZP_06979579.1| 30S ribosomal protein S3 [Streptococcus pneumoniae str. Canada
MDR_19A]
gi|298502029|ref|YP_003723969.1| 30S ribosomal protein S3 [Streptococcus pneumoniae TCH8431/19A]
gi|303255089|ref|ZP_07341165.1| 30S ribosomal protein S3 [Streptococcus pneumoniae BS455]
gi|303259267|ref|ZP_07345245.1| 30S ribosomal protein S3 [Streptococcus pneumoniae SP-BS293]
gi|303261022|ref|ZP_07346971.1| 30S ribosomal protein S3 [Streptococcus pneumoniae SP14-BS292]
gi|303263350|ref|ZP_07349273.1| 30S ribosomal protein S3 [Streptococcus pneumoniae BS397]
gi|303265515|ref|ZP_07351415.1| 30S ribosomal protein S3 [Streptococcus pneumoniae BS457]
gi|303267927|ref|ZP_07353729.1| 30S ribosomal protein S3 [Streptococcus pneumoniae BS458]
gi|306825980|ref|ZP_07459316.1| 30S ribosomal protein S3 [Streptococcus sp. oral taxon 071 str.
73H25AP]
gi|306828789|ref|ZP_07461981.1| 30S ribosomal protein S3 [Streptococcus mitis ATCC 6249]
gi|307066893|ref|YP_003875859.1| hypothetical protein SPAP_0264 [Streptococcus pneumoniae AP200]
gi|307126435|ref|YP_003878466.1| 30S ribosomal protein S3 [Streptococcus pneumoniae 670-6B]
gi|307702692|ref|ZP_07639644.1| ribosomal protein S3 [Streptococcus oralis ATCC 35037]
gi|307704071|ref|ZP_07641000.1| ribosomal protein S3 [Streptococcus mitis SK597]
gi|307708066|ref|ZP_07644534.1| ribosomal protein S3 [Streptococcus mitis NCTC 12261]
gi|307709916|ref|ZP_07646363.1| ribosomal protein S3 [Streptococcus mitis SK564]
gi|307711049|ref|ZP_07647471.1| ribosomal protein S3 [Streptococcus mitis SK321]
gi|309799064|ref|ZP_07693317.1| ribosomal protein S3 [Streptococcus infantis SK1302]
gi|315612338|ref|ZP_07887251.1| 30S ribosomal protein S3 [Streptococcus sanguinis ATCC 49296]
gi|322377224|ref|ZP_08051716.1| ribosomal protein S3 [Streptococcus sp. M334]
gi|322388395|ref|ZP_08061998.1| 30S ribosomal protein S3 [Streptococcus infantis ATCC 700779]
gi|322391205|ref|ZP_08064677.1| 30S ribosomal protein S3 [Streptococcus peroris ATCC 700780]
gi|331267130|ref|YP_004326760.1| 30S ribosomal protein S3 [Streptococcus oralis Uo5]
gi|61236203|sp|P0A4C3|RS3_STRPN RecName: Full=30S ribosomal protein S3
gi|61236210|sp|P0A4C4|RS3_STRR6 RecName: Full=30S ribosomal protein S3
gi|122279396|sp|Q04MN0|RS3_STRP2 RecName: Full=30S ribosomal protein S3
gi|226697763|sp|B5E6G1|RS3_STRP4 RecName: Full=30S ribosomal protein S3
gi|226697764|sp|B1I8K4|RS3_STRPI RecName: Full=30S ribosomal protein S3
gi|226697765|sp|B2IS46|RS3_STRPS RecName: Full=30S ribosomal protein S3
gi|254764547|sp|C1CAL8|RS3_STRP7 RecName: Full=30S ribosomal protein S3
gi|254764548|sp|B8ZKG3|RS3_STRPJ RecName: Full=30S ribosomal protein S3
gi|254764550|sp|C1CC12|RS3_STRZJ RecName: Full=30S ribosomal protein S3
gi|254764551|sp|C1CIA3|RS3_STRZP RecName: Full=30S ribosomal protein S3
gi|254764552|sp|C1CP94|RS3_STRZT RecName: Full=30S ribosomal protein S3
gi|14971683|gb|AAK74395.1| ribosomal protein S3 [Streptococcus pneumoniae TIGR4]
gi|15457740|gb|AAK98999.1| 30S Ribosomal protein S3 [Streptococcus pneumoniae R6]
gi|116075978|gb|ABJ53698.1| ribosomal protein S3 [Streptococcus pneumoniae D39]
gi|147757212|gb|EDK64251.1| 30S ribosomal protein S3 [Streptococcus pneumoniae SP11-BS70]
gi|147760137|gb|EDK67126.1| 30S ribosomal protein S3 [Streptococcus pneumoniae SP14-BS69]
gi|147762321|gb|EDK69282.1| 30S ribosomal protein S3 [Streptococcus pneumoniae SP18-BS74]
gi|147764720|gb|EDK71650.1| 30S ribosomal protein S3 [Streptococcus pneumoniae SP19-BS75]
gi|147923761|gb|EDK74873.1| 30S ribosomal protein S3 [Streptococcus pneumoniae SP3-BS71]
gi|147926416|gb|EDK77489.1| 30S ribosomal protein S3 [Streptococcus pneumoniae SP6-BS73]
gi|147928518|gb|EDK79533.1| 30S ribosomal protein S3 [Streptococcus pneumoniae SP9-BS68]
gi|147931468|gb|EDK82446.1| 30S ribosomal protein S3 [Streptococcus pneumoniae SP23-BS72]
gi|168996874|gb|ACA37486.1| ribosomal protein S3 [Streptococcus pneumoniae Hungary19A-6]
gi|172042832|gb|EDT50878.1| ribosomal protein S3 [Streptococcus pneumoniae CDC1873-00]
gi|182628528|gb|ACB89476.1| 30S ribosomal protein S3 [Streptococcus pneumoniae CGSP14]
gi|183570863|gb|EDT91391.1| ribosomal protein S3 [Streptococcus pneumoniae CDC1087-00]
gi|183571808|gb|EDT92336.1| ribosomal protein S3 [Streptococcus pneumoniae SP195]
gi|183573590|gb|EDT94118.1| ribosomal protein S3 [Streptococcus pneumoniae CDC0288-04]
gi|183576103|gb|EDT96631.1| ribosomal protein S3 [Streptococcus pneumoniae CDC3059-06]
gi|183577793|gb|EDT98321.1| ribosomal protein S3 [Streptococcus pneumoniae MLV-016]
gi|194358415|gb|ACF56863.1| 30S ribosomal protein S3 [Streptococcus pneumoniae G54]
gi|220673579|emb|CAR68065.1| 30S ribosomal protein S3 [Streptococcus pneumoniae ATCC 700669]
gi|225720919|gb|ACO16773.1| ribosomal protein S3 [Streptococcus pneumoniae 70585]
gi|225722244|gb|ACO18097.1| ribosomal protein S3 [Streptococcus pneumoniae JJA]
gi|225725911|gb|ACO21763.1| ribosomal protein S3 [Streptococcus pneumoniae P1031]
gi|225728266|gb|ACO24117.1| ribosomal protein S3 [Streptococcus pneumoniae Taiwan19F-14]
gi|270279534|gb|EFA25376.1| ribosomal protein S3 [Streptococcus sp. M143]
gi|291317187|gb|EFE57614.1| 30S ribosomal protein S3 [Streptococcus oralis ATCC 35037]
gi|298237624|gb|ADI68755.1| 30S ribosomal protein S3 [Streptococcus pneumoniae TCH8431/19A]
gi|301793488|emb|CBW35861.1| 30S ribosomal protein S3 [Streptococcus pneumoniae INV104]
gi|301799364|emb|CBW31899.1| 30S ribosomal protein S3 [Streptococcus pneumoniae OXC141]
gi|301801159|emb|CBW33832.1| 30S ribosomal protein S3 [Streptococcus pneumoniae INV200]
gi|302597919|gb|EFL64989.1| 30S ribosomal protein S3 [Streptococcus pneumoniae BS455]
gi|302637859|gb|EFL68345.1| 30S ribosomal protein S3 [Streptococcus pneumoniae SP14-BS292]
gi|302639685|gb|EFL70142.1| 30S ribosomal protein S3 [Streptococcus pneumoniae SP-BS293]
gi|302642623|gb|EFL72968.1| 30S ribosomal protein S3 [Streptococcus pneumoniae BS458]
gi|302644955|gb|EFL75202.1| 30S ribosomal protein S3 [Streptococcus pneumoniae BS457]
gi|302647123|gb|EFL77347.1| 30S ribosomal protein S3 [Streptococcus pneumoniae BS397]
gi|304428967|gb|EFM32055.1| 30S ribosomal protein S3 [Streptococcus mitis ATCC 6249]
gi|304431696|gb|EFM34676.1| 30S ribosomal protein S3 [Streptococcus sp. oral taxon 071 str.
73H25AP]
gi|306408430|gb|ADM83857.1| hypothetical protein SPAP_0264 [Streptococcus pneumoniae AP200]
gi|306483497|gb|ADM90366.1| ribosomal protein S3 [Streptococcus pneumoniae 670-6B]
gi|307615851|gb|EFN95056.1| ribosomal protein S3 [Streptococcus mitis NCTC 12261]
gi|307617011|gb|EFN96189.1| ribosomal protein S3 [Streptococcus mitis SK321]
gi|307619287|gb|EFN98416.1| ribosomal protein S3 [Streptococcus mitis SK564]
gi|307622361|gb|EFO01369.1| ribosomal protein S3 [Streptococcus mitis SK597]
gi|307623808|gb|EFO02793.1| ribosomal protein S3 [Streptococcus oralis ATCC 35037]
gi|308117299|gb|EFO54722.1| ribosomal protein S3 [Streptococcus infantis SK1302]
gi|315315319|gb|EFU63358.1| 30S ribosomal protein S3 [Streptococcus sanguinis ATCC 49296]
gi|321140708|gb|EFX36210.1| 30S ribosomal protein S3 [Streptococcus infantis ATCC 700779]
gi|321145958|gb|EFX41347.1| 30S ribosomal protein S3 [Streptococcus peroris ATCC 700780]
gi|321281937|gb|EFX58945.1| ribosomal protein S3 [Streptococcus sp. M334]
gi|326683802|emb|CBZ01420.1| 30S ribosomal protein S3 [Streptococcus oralis Uo5]
gi|327390634|gb|EGE88974.1| ribosomal protein S3 [Streptococcus pneumoniae GA04375]
gi|332075880|gb|EGI86347.1| ribosomal protein S3 [Streptococcus pneumoniae GA17570]
gi|332076661|gb|EGI87123.1| ribosomal protein S3 [Streptococcus pneumoniae GA17545]
gi|332077516|gb|EGI87977.1| ribosomal protein S3 [Streptococcus pneumoniae GA41301]
Length = 217
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 95/215 (44%), Positives = 147/215 (68%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L A V+ I IER
Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFVQKELADAAVSTIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G +++ +R KL+ +T ++H+++ E+ +P+++A L+ + I
Sbjct: 60 VNKVNVSLHTAKPGMVIGKGGANVDALRAKLNKLTGKQVHINIIEIKQPDLDAHLVGEGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE+RV FRRA K+A+Q AMR GA G+K SGRLNGA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLEQRVAFRRAQKQAIQRAMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDY A+T YG G+KV++ + + +T
Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTK 214
>gi|154507858|ref|ZP_02043500.1| hypothetical protein ACTODO_00340 [Actinomyces odontolyticus ATCC
17982]
gi|153797492|gb|EDN79912.1| hypothetical protein ACTODO_00340 [Actinomyces odontolyticus ATCC
17982]
Length = 269
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 101/226 (44%), Positives = 152/226 (67%), Gaps = 5/226 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQK+NP FRLG+ SRWF+ G Y + ED+ IR++L +L++AG+A++
Sbjct: 1 MGQKVNPRGFRLGITTDHRSRWFSDSTTKGQRYADYVAEDVAIRKFLTDNLERAGIAEVS 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + +++R +L +T ++ L++ EV P++ A L+
Sbjct: 61 IERTRDRVRVDLHTARPGIVIGRRGAEADRLRVQLEKLTGKQVQLNILEVKNPDLEAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ IA+QL RV FRRAM++ +QSA R GA G++V SGRL GAE+SR+E Y EGRVPL
Sbjct: 121 AQGIAEQLAARVSFRRAMRKGIQSAQRAGAKGIRVQVSGRLGGAEMSRSEFYREGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
TLRA+IDYG A T +G G+KV++ D +++ + AE
Sbjct: 181 TLRANIDYGFHEARTTFGRIGVKVWIYKGD-ITEREFARQQAEQAQ 225
>gi|313897172|ref|ZP_07830716.1| ribosomal protein S3 [Clostridium sp. HGF2]
gi|312957893|gb|EFR39517.1| ribosomal protein S3 [Clostridium sp. HGF2]
Length = 263
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 101/221 (45%), Positives = 141/221 (63%), Gaps = 2/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+GV W SRW+A +Y LL ED+KIRE+L K A V+++ IER+
Sbjct: 1 MGQKVSPIGLRVGVIRDWESRWYAD-KDYADLLLEDVKIREFLFAECKNASVSRVEIERS 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119
I++ +ARPG+IIG G ++E ++KK+ +T I+L V E+ P+++A L+A+S
Sbjct: 60 KNRVEIMIRTARPGVIIGTNGENVEMLKKKVEKLTGGKNIYLKVLEIANPDLDAKLVARS 119
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA QLE+R FR A K+A+Q MR GA G+K SGRL GA+++RTE Y EG VPL TLR
Sbjct: 120 IADQLEQRASFRTAQKKAIQRTMRAGAKGIKTAVSGRLGGADMARTEGYSEGVVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
A IDY A T YG G+KV++ + + P A
Sbjct: 180 ADIDYAWEEASTTYGRLGVKVWICRGEVLPGQMVQEPEAPK 220
>gi|296313371|ref|ZP_06863312.1| ribosomal protein S3 [Neisseria polysaccharea ATCC 43768]
gi|296840082|gb|EFH24020.1| ribosomal protein S3 [Neisseria polysaccharea ATCC 43768]
Length = 230
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 107/227 (47%), Positives = 160/227 (70%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRL V W S+WFA+ +++ +L +D+ +R YL+ L A V +++IER
Sbjct: 1 MGQKINPTGFRLAVTKDWASKWFAKSTDFSTVLKQDIDVRNYLRQKLANASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ RI ++SARPG++IGKKG DIE +++ L + +H+++ E+ +PE++A +IA I
Sbjct: 61 AKSARITIHSARPGVVIGKKGEDIEVLKRDLQALMGVPVHVNIEEIRRPELDAQIIADGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+RV FRRAMKRA+Q+AMR GA G+K++ SGRLNGA+++R+E Y EGRVPL TLRA
Sbjct: 121 AQQLEKRVQFRRAMKRAMQNAMRSGAKGIKIMTSGRLNGADIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
++DY T+ A T YG G+KV+V + S + + + +++
Sbjct: 181 NVDYATSEAHTTYGVLGLKVWVYTEGNIKSSKPEHESKQRKAGRRNA 227
>gi|225016279|ref|ZP_03705471.1| hypothetical protein CLOSTMETH_00182 [Clostridium methylpentosum
DSM 5476]
gi|224950954|gb|EEG32163.1| hypothetical protein CLOSTMETH_00182 [Clostridium methylpentosum
DSM 5476]
Length = 236
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 99/220 (45%), Positives = 153/220 (69%), Gaps = 4/220 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+SRWFA S +G +L ED +R++++ +L AG++KI IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWFAGKSTFGDILVEDYNLRKFIKKNLFAAGISKIEIERD 60
Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
+I ++ A+PG++IG+ G +IEK++ K+ + +++++ EV P++NA L+A++
Sbjct: 61 AAGRTKIHIHCAKPGIVIGRGGAEIEKLKAKIEKLIGKPVNINIVEVRTPDLNAQLVAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA QLERR+ FRRAMK+++ M+ GA G+K+ +GRLNGAE++R+E Y EG +PLQTLR
Sbjct: 121 IAAQLERRIAFRRAMKQSIGRTMKLGAKGIKIRVAGRLNGAEIARSESYHEGTIPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
A IDYG A A+T YG G+KV++ + + +PA E
Sbjct: 181 ADIDYGFAEADTTYGRIGVKVWIYKGEVLKGE---VPAEE 217
>gi|167759856|ref|ZP_02431983.1| hypothetical protein CLOSCI_02219 [Clostridium scindens ATCC 35704]
gi|167662475|gb|EDS06605.1| hypothetical protein CLOSCI_02219 [Clostridium scindens ATCC 35704]
Length = 218
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 97/211 (45%), Positives = 143/211 (67%), Gaps = 1/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+G+ W+S+W+A ++ L ED +IR YL+ L AGV++I IER
Sbjct: 1 MGQKVNPHGLRVGIIKDWDSKWYAE-KDFADYLVEDHEIRTYLKKRLYSAGVSRIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+II+Y+A+PG++IGK G +IEK++ +L T+ ++ + + EV +P+ A L+A++I
Sbjct: 60 SDRVKIIIYTAKPGVVIGKGGAEIEKVKGELVRFTDKKLVVDIKEVKRPDKEAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE R+ FRRAMK + M+ GA GVK SGRL GA+++RTE Y EG +PLQTLRA
Sbjct: 120 ALQLENRISFRRAMKSCMSRTMKSGALGVKTSVSGRLGGADMARTEFYSEGTIPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYG A A+T YG G+KV++ + + +
Sbjct: 180 DIDYGFAEADTTYGKVGVKVWIYKGEVLPEK 210
>gi|329768279|ref|ZP_08259780.1| 30S ribosomal protein S3 [Gemella haemolysans M341]
gi|328837478|gb|EGF87107.1| 30S ribosomal protein S3 [Gemella haemolysans M341]
Length = 217
Score = 256 bits (654), Expect = 2e-66, Method: Composition-based stats.
Identities = 102/215 (47%), Positives = 149/215 (69%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+GV W+S+W+A ++ A LHED KIRE++ LK A V+K+ IER
Sbjct: 1 MGQKVHPIGLRVGVIRDWDSKWYAE-KDFAANLHEDFKIREFISKQLKDASVSKVEIERF 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I V++ +PG++IGK G++I+K+R +L+ +T +H++V E+ K +I+A L+A++I
Sbjct: 60 DKRVNISVHTGKPGMVIGKGGSEIDKLRLELNKLTGKRVHINVVEIKKVDIDAKLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRA K+A+Q AMR GA G+K SGRL GA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLEARVSFRRAQKQAIQRAMRAGAKGIKTQVSGRLGGADIARAEHYSEGSVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDY A+T YG G+KV+++ + + S
Sbjct: 180 DIDYAHEEADTTYGKLGVKVWINRGEVLPTRKSEK 214
>gi|229917352|ref|YP_002885998.1| ribosomal protein S3 [Exiguobacterium sp. AT1b]
gi|259495247|sp|C4KZP0|RS3_EXISA RecName: Full=30S ribosomal protein S3
gi|229468781|gb|ACQ70553.1| ribosomal protein S3 [Exiguobacterium sp. AT1b]
Length = 219
Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 103/220 (46%), Positives = 150/220 (68%), Gaps = 2/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+SRW+A +Y LLHED IREY++ +K A V+K+ IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWYAE-KDYADLLHEDFVIREYIENKMKDASVSKVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-TNSEIHLSVNEVPKPEINATLIAQS 119
I +++A+PG++IGK G++IE +RK ++ + +H++V EV + A L+A++
Sbjct: 60 ANRVNISLHTAKPGMVIGKGGSEIESLRKHITKIADGKRVHINVVEVKNADAVAKLVAEN 119
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA+QLE RV FRRAMK+++Q +MR G G+K SGRL GA+++R+E Y EG VPL TLR
Sbjct: 120 IARQLEGRVSFRRAMKQSIQRSMRTGIKGIKTEVSGRLGGADIARSEKYSEGTVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
A IDYGTA A+T YG G+KV++ + + ++T AE
Sbjct: 180 ADIDYGTAEADTTYGKIGVKVWLYHGEVLPTKNNTAKNAE 219
>gi|319948717|ref|ZP_08022838.1| 30S ribosomal protein S3 [Dietzia cinnamea P4]
gi|319437619|gb|EFV92618.1| 30S ribosomal protein S3 [Dietzia cinnamea P4]
Length = 272
Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 98/220 (44%), Positives = 148/220 (67%), Gaps = 2/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRLG+ W S+WFA +Y + ED+KIR+ L +++AG++ + I RT
Sbjct: 1 MGQKIHPHGFRLGITSDWTSKWFAD-KQYADYVSEDIKIRQLLSKGMERAGISGVDISRT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++ARPG++IG++G + +++R +L +T ++HL++ E+ E +A L+AQ I
Sbjct: 60 RDRVHVDIHTARPGIVIGRRGAEADRLRGELEKLTGKQVHLNILEIKNTEADAQLVAQGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++ +QSAM + G+KV+ SGRL GAE+SR+E Y EGRVPL TLR
Sbjct: 120 AEQLSNRVAFRRAMRKGIQSAMRQPQVKGIKVVCSGRLGGAEMSRSERYHEGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
A IDYGT A+T +G G+KV++ D V + A+
Sbjct: 180 AEIDYGTYEAKTTFGRIGVKVWIYKGDVVGGRRESDQYAQ 219
>gi|116748996|ref|YP_845683.1| 30S ribosomal protein S3 [Syntrophobacter fumaroxidans MPOB]
gi|116698060|gb|ABK17248.1| SSU ribosomal protein S3P [Syntrophobacter fumaroxidans MPOB]
Length = 233
Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 108/208 (51%), Positives = 153/208 (73%), Gaps = 1/208 (0%)
Query: 2 GQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTH 61
GQK++P FRLG+ +W+SRWFA +Y L+HED KIR+Y++ L AG+AK+ IER
Sbjct: 27 GQKVHPTGFRLGILKSWDSRWFA-TKDYAKLVHEDRKIRDYIKARLYHAGIAKVEIERAA 85
Query: 62 KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIA 121
+I +++ARPG++IGKKG +IE +R+ L EI + + EV +PE++ATL+ ++I+
Sbjct: 86 NKVKIRIFTARPGIVIGKKGAEIETLRRDLERKFKREILIDIQEVRRPELDATLVGENIS 145
Query: 122 QQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH 181
QL RRV FRRAMKRAV +A++FGA GV+V ++GRL GAE++R E Y EGRVPL TLRA
Sbjct: 146 LQLVRRVAFRRAMKRAVSAALKFGAKGVRVASAGRLGGAEMARREWYREGRVPLHTLRAD 205
Query: 182 IDYGTAVAETAYGSCGIKVYVSLRDEVS 209
IDYGTA+A T YG+ G+KV++ + +
Sbjct: 206 IDYGTAIARTTYGAIGVKVWIFKGEVLP 233
>gi|238922836|ref|YP_002936349.1| SSU ribosomal protein S3P [Eubacterium rectale ATCC 33656]
gi|259495246|sp|C4ZBS5|RS3_EUBR3 RecName: Full=30S ribosomal protein S3
gi|238874508|gb|ACR74215.1| SSU ribosomal protein S3P [Eubacterium rectale ATCC 33656]
gi|291523738|emb|CBK89325.1| SSU ribosomal protein S3P [Eubacterium rectale DSM 17629]
gi|291528796|emb|CBK94382.1| SSU ribosomal protein S3P [Eubacterium rectale M104/1]
Length = 218
Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 96/211 (45%), Positives = 143/211 (67%), Gaps = 1/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+S+W+A G ++ L ED IR +L+ L AGV+KI IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAEG-DFADYLVEDYNIRTFLKKKLYAAGVSKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++I+Y+A+PG++IGK G +IEKI+ ++ +T+ ++ + + EV +P+ +A L+A++I
Sbjct: 60 SDRVKVIIYTAKPGVVIGKGGAEIEKIKAEVQKLTDKKLVVDIKEVKRPDKDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE RV FRRAMK + AM+ G G+K SGRL GA+++RTE Y +G PLQT+RA
Sbjct: 120 ALQLENRVSFRRAMKSCMGRAMKAGVKGIKTTCSGRLGGADMARTETYNDGTTPLQTIRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYG A A+T YG G+KV++ + +
Sbjct: 180 DIDYGFAEADTTYGKVGVKVWIYKGEVLPTK 210
>gi|220913426|ref|YP_002488735.1| ribosomal protein S3 [Arthrobacter chlorophenolicus A6]
gi|254764511|sp|B8HD00|RS3_ARTCA RecName: Full=30S ribosomal protein S3
gi|219860304|gb|ACL40646.1| ribosomal protein S3 [Arthrobacter chlorophenolicus A6]
Length = 276
Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 103/234 (44%), Positives = 154/234 (65%), Gaps = 8/234 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQK+NP FRLG+ S WFA G Y + ED++IR+ + +++AG+AK+
Sbjct: 1 MGQKVNPHGFRLGITTDHVSHWFADSTKSGQRYKDFVREDIRIRQLMSTGMERAGIAKVE 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV PE+ A L+
Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQVQLNILEVKNPEMEAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ +A+QL RV FRRAMK+A+QSA R GA G+++ SGRL GAE+SR+E Y EGRVPL
Sbjct: 121 AQGVAEQLTSRVAFRRAMKKAMQSAQRAGAKGIRIACSGRLGGAEMSRSEFYREGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRD----EVSDSDSTIPAAEHRVVEKD 226
TLRA+IDYG A+T +G G+KV++ D E++ ++ P+ R
Sbjct: 181 TLRANIDYGFYEAKTTFGRIGVKVWIYKGDVTAKELAAQAASAPSRGPRSDRGG 234
>gi|148244335|ref|YP_001219029.1| 30S ribosomal protein S3 [Candidatus Vesicomyosocius okutanii HA]
gi|189045345|sp|A5CXL0|RS3_VESOH RecName: Full=30S ribosomal protein S3
gi|146326162|dbj|BAF61305.1| 30S ribosomal protein S3 [Candidatus Vesicomyosocius okutanii HA]
Length = 230
Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 102/221 (46%), Positives = 152/221 (68%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP RLG+ W+S+W+A +Y L D+K+R YL L A V+++ I R
Sbjct: 1 MGQKVNPKGIRLGIIKDWDSKWYASSKDYSKYLLSDIKVRNYLFKKLINASVSRVQIGRL 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
N ++ +Y+ARPG++IGKKG DIE+++ +S M +H+++ E+ KPE++A L+A++I
Sbjct: 61 VNNAKVTIYTARPGIVIGKKGADIEQLKLIVSKMMGIPVHINIEEIKKPELDARLVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+RV++RRA+KR + +A R GA G+KV+ SGRLNGAE++R+E Y EGRVPL T RA
Sbjct: 121 AQQLEKRVMYRRAVKRVLGNATRLGAQGIKVMVSGRLNGAEIARSEWYREGRVPLHTFRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
+DY + A+T YG GIKV++ + + T+ HR
Sbjct: 181 DVDYSSYGAKTQYGVIGIKVWIFKGEILDHKKGTLDEVAHR 221
>gi|38233091|ref|NP_938858.1| 30S ribosomal protein S3 [Corynebacterium diphtheriae NCTC 13129]
gi|61215598|sp|Q6NJC9|RS3_CORDI RecName: Full=30S ribosomal protein S3
gi|38199350|emb|CAE48985.1| 30S ribosomal protein S3 [Corynebacterium diphtheriae]
Length = 248
Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 103/222 (46%), Positives = 147/222 (66%), Gaps = 2/222 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P RLG+ W S W+A Y L ED+++REYL L +AG+A ++IERT
Sbjct: 1 MGQKIHPHGLRLGITSDWKSHWYAD-KNYAEYLAEDIRVREYLVKTLDRAGIADVVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ R+ +++ARPG++IG++G++ +++R L +T ++ L++ EV + NA L+AQSI
Sbjct: 60 RERVRVDIHTARPGIVIGRRGSEADRLRTSLEKLTGKQVALNILEVKNIDANAQLVAQSI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+Q AM + G+KV+ SGRL GAE+SRTE Y EGRVPL TLR
Sbjct: 120 AEQLTNRVAFRRAMRKAIQGAMRQPQVKGIKVVCSGRLGGAEMSRTERYHEGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
A IDYGT A T +G G+KV++ D V + A
Sbjct: 180 AEIDYGTYEAHTTFGRIGVKVWIYKGDVVGGRRESEINAPAE 221
>gi|251781521|ref|YP_002995822.1| 30S ribosomal protein S3 [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|242390149|dbj|BAH80608.1| 30S ribosomal protein S3 [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|323126317|gb|ADX23614.1| 30S ribosomal protein S3 [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
Length = 217
Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 92/215 (42%), Positives = 147/215 (68%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+G+ W+++W+A EY LHEDL IR+++ L +A V+ I IER
Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFINKELAEASVSTIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G +++ +R +L+ +T ++H+++ E+ +P+++A L+ ++I
Sbjct: 60 VNKVIVSLHTAKPGMVIGKGGANVDALRAQLNKLTGKQVHINIIEIKQPDLDAHLVGENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE+RV FRRA K+A+Q MR GA G+K SGRLNGA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLEQRVAFRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDY A+T YG G+KV++ + + +T
Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTK 214
>gi|168178838|ref|ZP_02613502.1| ribosomal protein S3 [Clostridium botulinum NCTC 2916]
gi|182669980|gb|EDT81956.1| ribosomal protein S3 [Clostridium botulinum NCTC 2916]
Length = 223
Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 102/220 (46%), Positives = 147/220 (66%), Gaps = 1/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+GV W+++W+A + L ED KIR +++ + AGV++I IER
Sbjct: 1 MGQKVHPHGLRVGVIKEWDAKWYADKKNFADNLVEDHKIRNFVKKNSYAAGVSRIEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT-NSEIHLSVNEVPKPEINATLIAQS 119
K ++ +Y+A+PG+IIGK G IE ++ KL + N I +++ EV +PE +A LIA++
Sbjct: 61 AKRIKLNIYTAKPGMIIGKGGQGIESLKNKLQRIVSNKNILINIVEVKRPEADAQLIAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IAQQLE+R+ FRRAMK+++Q AMR G G+K SGRL GAE++RTE Y EG +PLQTLR
Sbjct: 121 IAQQLEKRIAFRRAMKQSIQRAMRSGVKGIKTACSGRLAGAEIARTEHYNEGTIPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
A IDYG A A+T YG G+KV+V + + + E
Sbjct: 181 ADIDYGFAEADTTYGKIGVKVWVYKGEVLPARKNINEKEE 220
>gi|229815769|ref|ZP_04446094.1| hypothetical protein COLINT_02818 [Collinsella intestinalis DSM
13280]
gi|229808685|gb|EEP44462.1| hypothetical protein COLINT_02818 [Collinsella intestinalis DSM
13280]
Length = 236
Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 106/222 (47%), Positives = 150/222 (67%), Gaps = 4/222 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+ P FRLG+ W SRWFA +Y L D++IR +L+ L +A V+++ IER
Sbjct: 1 MGQKVYPTGFRLGITENWRSRWFAE-KDYAKTLGNDIEIRRFLEKRLARAAVSRVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPKPEINATLIA 117
++I+ +ARPG++IGKKG++I+ +R +L + + + + V EV +PE++A L+A
Sbjct: 60 GDKVKVIILTARPGVVIGKKGSEIDGLRTELEKVAGVSKGNLSVDVIEVKRPELDAVLVA 119
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
QSIA+QLE RV FRRAM++AVQSA + GA G+++ SGRL GAE+ R E Y EGRVPL T
Sbjct: 120 QSIAEQLEGRVAFRRAMRKAVQSARKAGAKGIRIQCSGRLGGAEMGRREWYREGRVPLHT 179
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
LRA IDYGTA A T GSCG+KV++ +++ A E
Sbjct: 180 LRAKIDYGTATARTTMGSCGVKVWIYQGEKLPGQPVPNMALE 221
>gi|241889104|ref|ZP_04776408.1| ribosomal protein S3 [Gemella haemolysans ATCC 10379]
gi|241864353|gb|EER68731.1| ribosomal protein S3 [Gemella haemolysans ATCC 10379]
Length = 217
Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 102/215 (47%), Positives = 149/215 (69%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+GV W+S+W+A ++ A LHED KIRE++ LK A V+K+ IER
Sbjct: 1 MGQKVHPIGLRVGVIRDWDSKWYAE-KDFAANLHEDFKIREFISKQLKDASVSKVEIERF 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I V++ +PG++IGK G++I+K+R +L+ +T +H++V E+ K +I+A L+A++I
Sbjct: 60 DKKVNISVHTGKPGMVIGKGGSEIDKLRLELNKLTGKRVHINVVEIKKVDIDAKLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRA K+A+Q AMR GA G+K SGRL GA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLEARVSFRRAQKQAIQRAMRAGAKGIKTQVSGRLGGADIARAEHYSEGSVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDY A+T YG G+KV+++ + + S
Sbjct: 180 DIDYAHEEADTTYGKLGVKVWINRGEVLPTRKSEK 214
>gi|240145872|ref|ZP_04744473.1| ribosomal protein S3 [Roseburia intestinalis L1-82]
gi|257202021|gb|EEV00306.1| ribosomal protein S3 [Roseburia intestinalis L1-82]
gi|291537920|emb|CBL11031.1| SSU ribosomal protein S3P [Roseburia intestinalis XB6B4]
Length = 218
Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 97/209 (46%), Positives = 142/209 (67%), Gaps = 1/209 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+S+W+A +++ L ED IR L+ L AGV+KI IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAE-ADFADFLVEDYNIRTCLKKKLYAAGVSKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++I+Y+A+PG++IGK G +IEKI+ ++ T+ ++ + + EV +P+ +A L+A++I
Sbjct: 60 SDRVKVIIYTAKPGVVIGKGGAEIEKIKGEVQKFTDKKLVVDIKEVKRPDRDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE RV FRRAMK + M+ GA G+K SGRL GA+++RTE Y EG +PLQTLRA
Sbjct: 120 ALQLENRVSFRRAMKSCMGRTMKSGAKGIKTSCSGRLGGADMARTEFYSEGTIPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVS 209
IDYG A A+T YG G+KV++ + +
Sbjct: 180 DIDYGFAEADTTYGKVGVKVWIYKGEVLP 208
>gi|90994498|ref|YP_536988.1| ribosomal protein S3 [Porphyra yezoensis]
gi|122225817|sp|Q1XDI0|RR3_PORYE RecName: Full=30S ribosomal protein S3, chloroplastic
gi|90819062|dbj|BAE92431.1| 30S ribosomal protein S3 [Porphyra yezoensis]
gi|116266134|gb|ABJ91305.1| 30S ribosomal protein S3 [Porphyra yezoensis]
Length = 230
Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 102/226 (45%), Positives = 142/226 (62%), Gaps = 2/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P+ FR+G+ S WFA +Y LL ED KIR ++ L A +AKI I R
Sbjct: 1 MGQKIHPLGFRIGITQKHRSSWFANSKDYPVLLQEDHKIRSFIHSKLSNASIAKIEINRK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLIAQ 118
I++ +ARPG+++GK G IE +RK LS + + ++ ++V E+ P+ ATL+A+
Sbjct: 61 VDQVEILIATARPGIVLGKSGAGIESLRKSLSLILDPSKQLRVNVVEIADPDSEATLVAE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
I QQLE+RV FRRA+++AVQ A R GVK+ SGRLNGAE++R+E EGRVPLQTL
Sbjct: 121 FITQQLEKRVAFRRAVRQAVQRAQRANTQGVKIQVSGRLNGAEIARSEWVREGRVPLQTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
RA IDY A T YG G+KV++ + + +S S A +
Sbjct: 181 RADIDYCHRQAHTTYGVLGVKVWLFKGEILPESKSLESAYNQETPD 226
>gi|318042558|ref|ZP_07974514.1| 30S ribosomal protein S3 [Synechococcus sp. CB0101]
Length = 242
Score = 256 bits (653), Expect = 2e-66, Method: Composition-based stats.
Identities = 96/230 (41%), Positives = 141/230 (61%), Gaps = 5/230 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KI+P RLG+ SRW+A Y LL ED +IR+++ AG++ ++I R
Sbjct: 1 MGHKIHPTGLRLGITQEHRSRWYAPSKTYPTLLQEDDRIRKFIHKKYGAAGISDVVIARK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117
+ + +ARPG+++G++G+ IE++R + ++ ++V EV + + +A L+A
Sbjct: 61 ADQLEVELKTARPGVLVGRQGSGIEELRSGIQKTIGDTSRQVRINVVEVERVDADAYLLA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ IAQQLE+RV FRR M+ A+Q A R G G+K+ SGRLNGAE++RTE EGRVPL T
Sbjct: 121 EYIAQQLEKRVAFRRVMRMAIQRAQRAGVLGLKIQVSGRLNGAEIARTEWTREGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP--AAEHRVVEK 225
LRA IDY T VA T YG GIKV+V + + + +P AA R +
Sbjct: 181 LRADIDYATKVATTTYGVLGIKVWVFKGEVLPGNKDKVPVGAAPKRRASR 230
>gi|322375033|ref|ZP_08049547.1| ribosomal protein S3 [Streptococcus sp. C300]
gi|321280533|gb|EFX57572.1| ribosomal protein S3 [Streptococcus sp. C300]
Length = 217
Score = 256 bits (653), Expect = 3e-66, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 147/215 (68%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L A V+ I IER
Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFVQKELADAAVSTIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G +++ +R KL+ +T ++H+++ E+ +P+++A L+ + I
Sbjct: 60 VNKVNVSLHTAKPGMVIGKGGANVDALRAKLNKLTGKQVHINIIEIKQPDLDAHLVGEGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE+RV FRRA K+A+Q A+R GA G+K SGRLNGA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLEQRVAFRRAQKQAIQRAIRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDY A+T YG G+KV++ + + +T
Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTK 214
>gi|210631088|ref|ZP_03296744.1| hypothetical protein COLSTE_00629 [Collinsella stercoris DSM 13279]
gi|210160176|gb|EEA91147.1| hypothetical protein COLSTE_00629 [Collinsella stercoris DSM 13279]
Length = 236
Score = 256 bits (653), Expect = 3e-66, Method: Composition-based stats.
Identities = 107/222 (48%), Positives = 150/222 (67%), Gaps = 4/222 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+ P FRLG+ W SRWFA +Y L D++IR +L+ L +A V+++ IER
Sbjct: 1 MGQKVYPTGFRLGITENWRSRWFAE-KDYAKTLGNDIEIRRFLEKRLARAAVSRVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPKPEINATLIA 117
++I+ +ARPG++IGKKG++I+ +R +L + T + + V EV +PE++A L+A
Sbjct: 60 GDKVKVIILTARPGVVIGKKGSEIDGLRTELERVAGVTKGNLSVDVIEVKRPELDAVLVA 119
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
QSIA+QLE RV FRRAM++AVQSA + GA G+++ SGRL GAE+ R E Y EGRVPL T
Sbjct: 120 QSIAEQLEGRVAFRRAMRKAVQSARKAGAKGIRIQCSGRLGGAEMGRREWYREGRVPLHT 179
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
LRA IDYGTA A T GSCG+KV++ +++ A E
Sbjct: 180 LRAKIDYGTATAHTTMGSCGVKVWIYQGEKLPGQPVPNMALE 221
>gi|30248424|ref|NP_840494.1| 30S ribosomal protein S3 [Nitrosomonas europaea ATCC 19718]
gi|61215742|sp|Q820R1|RS3_NITEU RecName: Full=30S ribosomal protein S3
gi|30138310|emb|CAD84318.1| Ribosomal protein S3:Type 2 KH domain:KH domain [Nitrosomonas
europaea ATCC 19718]
Length = 215
Score = 256 bits (653), Expect = 3e-66, Method: Composition-based stats.
Identities = 111/214 (51%), Positives = 156/214 (72%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRL V W+SRW+ ++ L+ED+ +R+YLQ L A V I+IER
Sbjct: 1 MGQKINPTGFRLSVLKNWSSRWYTNTKKFSDFLNEDISVRQYLQKKLAHASVGSIIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN +I ++++RPG++IGKKG DIE +R+ + + N +H+++ E+ KPEI+A LIA SI
Sbjct: 61 SKNAKITIHTSRPGVVIGKKGEDIEILRRNVEKLMNVPVHINIEEIRKPEIDAQLIAASI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLE+R++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLEKRIMFRRAMKRAIQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
+DYGT+ A T YG G+KV+V +++ +
Sbjct: 181 EVDYGTSEARTTYGIIGVKVWVFKGEQLGIKERQ 214
>gi|317496184|ref|ZP_07954544.1| ribosomal protein S3 [Gemella moribillum M424]
gi|316913759|gb|EFV35245.1| ribosomal protein S3 [Gemella moribillum M424]
Length = 217
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 101/215 (46%), Positives = 148/215 (68%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+GV W+S+W+A ++ LHED KIRE++ LK A V+K+ IER
Sbjct: 1 MGQKVHPIGLRVGVIRDWDSKWYAE-KDFATNLHEDFKIREFISKQLKDASVSKVEIERF 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I V++ +PG++IGK G++I+K+R +L+ +T +H++V E+ K +I+A L+A++I
Sbjct: 60 DKKVNISVHTGKPGMVIGKGGSEIDKLRLELNKLTGKRVHINVVEIKKVDIDAKLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRA K+A+Q AMR GA G+K SGRL GA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLEARVSFRRAQKQAIQRAMRAGAKGIKTQVSGRLGGADIARAEHYSEGSVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDY A+T YG G+KV+++ + + S
Sbjct: 180 DIDYAHEEADTTYGKLGVKVWINRGEVLPTKKSEK 214
>gi|312200014|ref|YP_004020075.1| ribosomal protein S3 [Frankia sp. EuI1c]
gi|311231350|gb|ADP84205.1| ribosomal protein S3 [Frankia sp. EuI1c]
Length = 314
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 101/227 (44%), Positives = 154/227 (67%), Gaps = 2/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FRLG+ + SRW+A +Y A + ED+KIR+ + +++AG++++ IERT
Sbjct: 1 MGQKVNPHGFRLGITSEFTSRWYAD-KQYKAYVGEDVKIRKMMSKGMERAGISRVDIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PE++A L+AQ +
Sbjct: 60 QGRLRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPEVDAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++A+Q+AM+ GA G++V SGRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLSSRVSFRRAMRKAMQTAMKGGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS-DSTIPAAEHRVVEKD 226
IDYG A T +G G+KV++ D V + A R ++
Sbjct: 180 DIDYGFYEARTTFGRIGVKVWIYKGDVVQSRAEREAQEALTRQHRRE 226
>gi|15674293|ref|NP_268466.1| 30S ribosomal protein S3 [Streptococcus pyogenes M1 GAS]
gi|19745247|ref|NP_606383.1| 30S ribosomal protein S3 [Streptococcus pyogenes MGAS8232]
gi|22536249|ref|NP_687100.1| 30S ribosomal protein S3 [Streptococcus agalactiae 2603V/R]
gi|25010139|ref|NP_734534.1| 30S ribosomal protein S3 [Streptococcus agalactiae NEM316]
gi|50913445|ref|YP_059417.1| 30S ribosomal protein S3 [Streptococcus pyogenes MGAS10394]
gi|71902715|ref|YP_279518.1| 30S ribosomal protein S3 [Streptococcus pyogenes MGAS6180]
gi|71909864|ref|YP_281414.1| 30S ribosomal protein S3 [Streptococcus pyogenes MGAS5005]
gi|76787747|ref|YP_328790.1| 30S ribosomal protein S3 [Streptococcus agalactiae A909]
gi|94987681|ref|YP_595782.1| 30S ribosomal protein S3 [Streptococcus pyogenes MGAS9429]
gi|94989561|ref|YP_597661.1| 30S ribosomal protein S3 [Streptococcus pyogenes MGAS10270]
gi|94991551|ref|YP_599650.1| 30S ribosomal protein S3 [Streptococcus pyogenes MGAS2096]
gi|94993449|ref|YP_601547.1| 30S ribosomal protein S3 [Streptococcus pyogenes MGAS10750]
gi|139472933|ref|YP_001127648.1| 30S ribosomal protein S3 [Streptococcus pyogenes str. Manfredo]
gi|161485757|ref|NP_663850.2| 30S ribosomal protein S3 [Streptococcus pyogenes MGAS315]
gi|161486359|ref|NP_801310.2| 30S ribosomal protein S3 [Streptococcus pyogenes SSI-1]
gi|306828254|ref|ZP_07461514.1| 30S ribosomal protein S3 [Streptococcus pyogenes ATCC 10782]
gi|54039505|sp|P66556|RS3_STRP3 RecName: Full=30S ribosomal protein S3
gi|54039506|sp|P66557|RS3_STRP8 RecName: Full=30S ribosomal protein S3
gi|54039507|sp|P66558|RS3_STRA3 RecName: Full=30S ribosomal protein S3
gi|54039508|sp|P66559|RS3_STRA5 RecName: Full=30S ribosomal protein S3
gi|54041961|sp|P66555|RS3_STRP1 RecName: Full=30S ribosomal protein S3
gi|61215416|sp|Q5XEC9|RS3_STRP6 RecName: Full=30S ribosomal protein S3
gi|91207844|sp|Q3K3W3|RS3_STRA1 RecName: Full=30S ribosomal protein S3
gi|91207845|sp|Q48VU3|RS3_STRPM RecName: Full=30S ribosomal protein S3
gi|122986875|sp|Q1J908|RS3_STRPF RecName: Full=30S ribosomal protein S3
gi|122986959|sp|Q1JE52|RS3_STRPB RecName: Full=30S ribosomal protein S3
gi|122987151|sp|Q1JP11|RS3_STRPC RecName: Full=30S ribosomal protein S3
gi|123258075|sp|Q1JJ56|RS3_STRPD RecName: Full=30S ribosomal protein S3
gi|152060908|sp|A2RC20|RS3_STRPG RecName: Full=30S ribosomal protein S3
gi|22533069|gb|AAM98972.1|AE014194_17 ribosomal protein S3 [Streptococcus agalactiae 2603V/R]
gi|13621374|gb|AAK33188.1| 30S ribosomal protein S3 [Streptococcus pyogenes M1 GAS]
gi|19747341|gb|AAL96882.1| 30S ribosomal protein S3 [Streptococcus pyogenes MGAS8232]
gi|23094490|emb|CAD45709.1| ribosomal protein S3 [Streptococcus agalactiae NEM316]
gi|50902519|gb|AAT86234.1| SSU ribosomal protein S3P [Streptococcus pyogenes MGAS10394]
gi|71801810|gb|AAX71163.1| SSU ribosomal protein S3P [Streptococcus pyogenes MGAS6180]
gi|71852646|gb|AAZ50669.1| SSU ribosomal protein S3P [Streptococcus pyogenes MGAS5005]
gi|76562804|gb|ABA45388.1| ribosomal protein S3 [Streptococcus agalactiae A909]
gi|94541189|gb|ABF31238.1| SSU ribosomal protein S3P [Streptococcus pyogenes MGAS9429]
gi|94543069|gb|ABF33117.1| SSU ribosomal protein S3P [Streptococcus pyogenes MGAS10270]
gi|94545059|gb|ABF35106.1| SSU ribosomal protein S3P [Streptococcus pyogenes MGAS2096]
gi|94546957|gb|ABF37003.1| SSU ribosomal protein S3P [Streptococcus pyogenes MGAS10750]
gi|134271179|emb|CAM29392.1| 30S ribosomal protein S3 [Streptococcus pyogenes str. Manfredo]
gi|304429565|gb|EFM32614.1| 30S ribosomal protein S3 [Streptococcus pyogenes ATCC 10782]
Length = 217
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 92/215 (42%), Positives = 146/215 (67%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+G+ W+++W+A EY LHEDL IR+++ L A V+ I IER
Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFINKELADASVSTIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G +++ +R +L+ +T ++H+++ E+ +P+++A L+ ++I
Sbjct: 60 VNKVIVSLHTAKPGMVIGKGGANVDALRGQLNKLTGKQVHINIIEIKQPDLDAHLVGENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE+RV FRRA K+A+Q MR GA G+K SGRLNGA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLEQRVAFRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDY A+T YG G+KV++ + + +T
Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTK 214
>gi|282882538|ref|ZP_06291159.1| ribosomal protein S3 [Peptoniphilus lacrimalis 315-B]
gi|281297680|gb|EFA90155.1| ribosomal protein S3 [Peptoniphilus lacrimalis 315-B]
Length = 260
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 99/214 (46%), Positives = 148/214 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+S+W+A + LL ED +IR+Y++ L AG++KI IER
Sbjct: 1 MGQKVNPHGLRVGVIKNWDSKWYANKKNFSELLVEDNEIRKYIKKKLYVAGISKIEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ +Y+A+PG++IG+ G +E++RK++ +T I L+V EV P+I+A L+++SI
Sbjct: 61 ANRVKVSIYTAKPGVVIGRGGAGVEELRKEVEKLTGKSIVLNVEEVKNPDIDAQLVSESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+ LERRV FRRAMK+A+Q MR GA G+K +GRL GA+++RTE Y EG +PLQTLRA
Sbjct: 121 AEALERRVSFRRAMKQAIQRTMRAGALGIKTAVAGRLGGADMARTEGYSEGTIPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
IDYG + A+T YG G+KV++ + + +
Sbjct: 181 DIDYGFSEADTTYGKLGVKVWLYKGEILPEFKEE 214
>gi|320451294|ref|YP_004203390.1| 30S ribosomal protein S3 [Thermus scotoductus SA-01]
gi|320151463|gb|ADW22841.1| 30S ribosomal protein S3 [Thermus scotoductus SA-01]
Length = 239
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 107/224 (47%), Positives = 141/224 (62%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KI+PI FRLG+ W SRW+A +Y LL ED +IRE L L AG+A+I IER
Sbjct: 1 MGNKIHPIGFRLGITRDWESRWYAGKKQYRHLLVEDQRIREVLTKELYPAGLARIDIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
N + V+ A+PG++IG+ G I+ +R LS +T + L+V E+ P ++A L+AQ +
Sbjct: 61 ADNVAVTVHVAKPGVVIGRGGEKIKVLRDTLSQLTGKNVALNVQEIHNPNLSAPLVAQRV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+ERR RRA+K+AVQ M GA G KVI SGR+ GAE +RTE EGRVPL TLRA
Sbjct: 121 AEQIERRFAVRRAIKQAVQRVMEAGAKGAKVIVSGRIGGAEQARTEWAAEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
+IDYG A+A T YG G+K YV L + + R E
Sbjct: 181 NIDYGFALARTTYGVLGVKAYVFLGEVIGGQKPKARPEGPRAEE 224
>gi|253681391|ref|ZP_04862188.1| ribosomal protein S3 [Clostridium botulinum D str. 1873]
gi|253561103|gb|EES90555.1| ribosomal protein S3 [Clostridium botulinum D str. 1873]
Length = 221
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 99/221 (44%), Positives = 144/221 (65%), Gaps = 1/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+GV W+++W+A + L ED KIR++++ AGVAK IERT
Sbjct: 1 MGQKVHPHGLRVGVIKDWDAKWYANNQNFADNLIEDDKIRKFIKKKCFSAGVAKTEIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-TNSEIHLSVNEVPKPEINATLIAQS 119
K +I +++ +PG+IIGK G IE+I+ ++ +M + +++ EV +PE +A L+A++
Sbjct: 61 PKRVKINIHTGKPGMIIGKGGKGIEEIKSEILSMVREKNVIINIVEVKRPETDAQLMAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IAQQLE+R+ FRRAMK+ +Q AMR G GVK SGRL GAE++RTE Y EG +PLQTLR
Sbjct: 121 IAQQLEKRISFRRAMKQTIQRAMRCGVKGVKTACSGRLGGAEIARTEQYHEGTIPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
A IDYG A A+T YG G+KV++ + +
Sbjct: 181 ADIDYGFAEADTTYGKIGVKVWLYRGEVLPAKKVRTQEISQ 221
>gi|119962873|ref|YP_948651.1| ribosomal protein S3 [Arthrobacter aurescens TC1]
gi|152060843|sp|A1R8T9|RS3_ARTAT RecName: Full=30S ribosomal protein S3
gi|119949732|gb|ABM08643.1| ribosomal protein S3 [Arthrobacter aurescens TC1]
Length = 273
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 105/228 (46%), Positives = 150/228 (65%), Gaps = 4/228 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQK+NP FRLG+ S WFA G Y + ED+KIR+ + +++AG+AK+
Sbjct: 1 MGQKVNPHGFRLGITTDHVSHWFADSTKPGQRYKDFVREDIKIRQLMSTGMERAGIAKVE 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV PE+ A L+
Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQVQLNILEVKNPEMEAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ IA+QL RV FRRAMK+A+QSA R GA G++V SGRL GAE+SR+E Y EGRVPL
Sbjct: 121 AQGIAEQLTSRVAFRRAMKKAMQSAQRAGAKGIRVACSGRLGGAEMSRSEFYREGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
TLRA+IDYG A+T +G G+KV++ D + + AA
Sbjct: 181 TLRANIDYGFYEAKTTFGRIGVKVWIYKGDVTAKELAQQAAAAPSRGR 228
>gi|222873445|gb|EEF10576.1| predicted protein [Populus trichocarpa]
Length = 206
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 113/206 (54%), Positives = 155/206 (75%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V+ W SRW+A +++ +L ED+++RE+L+ LK A V +++IER
Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNTKFAGMLKEDIEVREFLKKKLKNASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+N RI +YS+RPG++IGKKG DIE ++ +L +H+++ E+ KPE +A LIA SI
Sbjct: 61 ARNARITIYSSRPGVVIGKKGEDIELLKAELQRRMGVPVHVNIEEIRKPETDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLERR++FRRAMKRA+Q+AMR GA G+K+++SGRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSSGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRD 206
IDYG + AET YG G+KV+V D
Sbjct: 181 DIDYGFSEAETTYGIIGVKVWVYKGD 206
>gi|284033996|ref|YP_003383927.1| 30S ribosomal protein S3 [Kribbella flavida DSM 17836]
gi|283813289|gb|ADB35128.1| ribosomal protein S3 [Kribbella flavida DSM 17836]
Length = 281
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 95/207 (45%), Positives = 143/207 (69%), Gaps = 1/207 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FRLG++ SRW+A Y + ED+KIR L +++AG++++ IERT
Sbjct: 1 MGQKVNPHGFRLGISTDHKSRWYAD-KLYKDYVGEDVKIRRLLSKGMERAGISRVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV E++A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGSLEELTGKQVQLNILEVKNAEVDAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++A+Q+ MR GA G+++ SGRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLSGRVAFRRAMRKAMQTTMRGGALGIRIQCSGRLGGAEMSRSEFYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207
+DYG A T +G G+KV++ D
Sbjct: 180 DVDYGFYEARTTFGRIGVKVWIYKGDV 206
>gi|222152271|ref|YP_002561446.1| 30S ribosomal protein S3 [Streptococcus uberis 0140J]
gi|254764549|sp|B9DSV6|RS3_STRU0 RecName: Full=30S ribosomal protein S3
gi|222113082|emb|CAR40449.1| 30S ribosomal protein S3 [Streptococcus uberis 0140J]
Length = 217
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 147/215 (68%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L +A V+ I IER
Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFIQKELAEASVSTIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G +++ +R +L+ +T ++H+++ E+ P+++A L+ ++I
Sbjct: 60 INKVIVSLHTAKPGMVIGKGGANVDALRAQLNKLTGKQVHINIIEIKSPDLDAHLVGENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE+RV FRRA K+A+Q MR GA G+K SGRLNGA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLEQRVAFRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDY A+T YG G+KV++ + + +T
Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTK 214
>gi|322410864|gb|EFY01772.1| 30S ribosomal protein S3 [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 217
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 92/215 (42%), Positives = 147/215 (68%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+G+ W+++W+A EY LHEDL IR+++ L +A V+ I IER
Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFINKELAEASVSTIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G +++ +R +L+ +T ++H+++ E+ +P+++A L+ ++I
Sbjct: 60 INKVIVSLHTAKPGMVIGKGGANVDALRAQLNKLTGKQVHINIIEIKQPDLDAHLVGENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE+RV FRRA K+A+Q MR GA G+K SGRLNGA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLEQRVAFRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDY A+T YG G+KV++ + + +T
Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTK 214
>gi|224477214|ref|YP_002634820.1| 30S ribosomal protein S3 [Staphylococcus carnosus subsp. carnosus
TM300]
gi|222421821|emb|CAL28635.1| 30S ribosomal protein S3 [Staphylococcus carnosus subsp. carnosus
TM300]
Length = 217
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 97/214 (45%), Positives = 148/214 (69%), Gaps = 1/214 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI R+G+ W+++W+A ++ LLHEDLKIR+++ LK+A V+ + IER
Sbjct: 1 MGQKINPIGLRVGIIRDWDAKWYAE-KDFSTLLHEDLKIRKFIDNELKEASVSNVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++ +PG++IGK G++IEK+R KL+ +T +H++V E+ K +++A L+A++I
Sbjct: 60 ANRINIAIHTGKPGMVIGKGGSEIEKLRNKLNKLTGKRVHINVIEIKKVDLDARLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R FRR K+A+ AM+ GA GVK SGRL GA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLENRASFRRVQKQAISRAMKLGALGVKTQVSGRLGGADIARAERYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
IDY A A+T YG G+KV++ + + +++
Sbjct: 180 DIDYAHAEADTTYGKLGVKVWIYRGEVLPTKNNS 213
>gi|309777138|ref|ZP_07672101.1| ribosomal protein S3 [Erysipelotrichaceae bacterium 3_1_53]
gi|308915008|gb|EFP60785.1| ribosomal protein S3 [Erysipelotrichaceae bacterium 3_1_53]
Length = 263
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 101/221 (45%), Positives = 141/221 (63%), Gaps = 2/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+GV W SRW+A +Y LL ED+KIRE+L K A V+++ IER+
Sbjct: 1 MGQKVSPIGLRVGVIRDWESRWYAD-KDYADLLLEDVKIREFLFAECKNASVSRVEIERS 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119
I++ +ARPG+IIG G ++E ++KK+ +T I+L V E+ P+++A L+A+S
Sbjct: 60 KNRVEIMIRTARPGVIIGTNGENVEMLKKKVEKLTGGKNIYLKVLEIANPDLDAKLVARS 119
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA QLE+R FR A K+A+Q MR GA G+K SGRL GA+++RTE Y EG VPL TLR
Sbjct: 120 IADQLEQRASFRTAQKKAIQRTMRAGAKGIKTAVSGRLGGADMARTEGYSEGVVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
A IDY A T YG G+KV++ + + P A
Sbjct: 180 ADIDYAWEEASTTYGRLGVKVWICRGEVLPGQMVQEPEAPK 220
>gi|317968823|ref|ZP_07970213.1| 30S ribosomal protein S3 [Synechococcus sp. CB0205]
Length = 242
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 96/230 (41%), Positives = 142/230 (61%), Gaps = 5/230 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KI+P RLG+ SRW+A Y +LL ED +IR+++ AG++ ++I R
Sbjct: 1 MGHKIHPTGLRLGITQEHRSRWYAPSKTYPSLLKEDDQIRKFIHKKYGAAGISDVVIARK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117
+ + +ARPG+++G++G+ IE++R + ++ ++V EV + + +A L+A
Sbjct: 61 ADQLEVELKTARPGVLVGRQGSGIEELRSGIQKTIGDSARQVRINVVEVERVDADAFLLA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ IAQQLE+RV FRR M+ A+Q A R G G+K+ SGRLNGAE++RTE EGRVPL T
Sbjct: 121 EYIAQQLEKRVAFRRVMRMAIQRAQRAGVLGMKLQVSGRLNGAEIARTEWSREGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP--AAEHRVVEK 225
LRA IDY T VA T YG GIKV+V + + + +P AA R +
Sbjct: 181 LRADIDYATKVATTTYGVLGIKVWVFKGEVLPGTQDKVPVGAAPKRRASR 230
>gi|293190253|ref|ZP_06608749.1| ribosomal protein S3 [Actinomyces odontolyticus F0309]
gi|292821069|gb|EFF80022.1| ribosomal protein S3 [Actinomyces odontolyticus F0309]
Length = 269
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 101/226 (44%), Positives = 152/226 (67%), Gaps = 5/226 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQK+NP FRLG+ SRWF+ G Y + ED+ IR++L +L++AG+A++
Sbjct: 1 MGQKVNPRGFRLGITTDHRSRWFSDSTTKGQRYADYVAEDVAIRKFLTDNLERAGIAEVS 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + +++R +L +T ++ L++ EV P++ A L+
Sbjct: 61 IERTRDRVRVDLHTARPGIVIGRRGAEADRLRVQLEKLTGKQVQLNILEVKNPDLEAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ IA+QL RV FRRAM++ +QSA R GA G++V SGRL GAE+SR+E Y EGRVPL
Sbjct: 121 AQGIAEQLAARVSFRRAMRKGIQSAQRAGARGIRVQVSGRLGGAEMSRSEFYREGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
TLRA+IDYG A T +G G+KV++ D +++ + AE
Sbjct: 181 TLRANIDYGFHEARTTFGRIGVKVWIYKGD-ITEREFARQQAEQAQ 225
>gi|319940054|ref|ZP_08014408.1| 30S ribosomal protein S3 [Streptococcus anginosus 1_2_62CV]
gi|319810768|gb|EFW07095.1| 30S ribosomal protein S3 [Streptococcus anginosus 1_2_62CV]
Length = 217
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 145/215 (67%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L A V+ I IER
Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFVQKELADAAVSTIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G +++ +R KL+ +T ++H+++ E+ P+++A L+ + I
Sbjct: 60 VNKVNVSLHTAKPGMVIGKGGANVDALRAKLNKLTGKQVHINIIEIKSPDLDAHLVGEGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE+RV FRRA K+A+Q MR GA G+K SGRLNGA+++R+E Y EG VPL TLRA
Sbjct: 120 ARQLEQRVAFRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARSEGYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDY A T YG G+KV++ + + +T
Sbjct: 180 DIDYAWEEAATTYGKLGVKVWIYRGEVLPARKNTK 214
>gi|153854976|ref|ZP_01996189.1| hypothetical protein DORLON_02195 [Dorea longicatena DSM 13814]
gi|149752473|gb|EDM62404.1| hypothetical protein DORLON_02195 [Dorea longicatena DSM 13814]
Length = 217
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 99/211 (46%), Positives = 144/211 (68%), Gaps = 1/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+SRW+A ++ L ED +IR YL+ L AG++KI IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWYAE-KDFADCLVEDHEIRTYLKKRLYSAGISKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+IIVY+A+PG++IGK G +IEK++ +L+ T+ ++ + + E+ +P+ +A L+A++I
Sbjct: 60 SDRVKIIVYTAKPGVVIGKGGAEIEKVKGELAQFTDKKLIVDIKEIKRPDKDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE R+ FRRAMK + M+ GA GVK SGRL GA+++RTE Y EG +PLQTLRA
Sbjct: 120 ALQLENRISFRRAMKSCMSRTMKSGALGVKTSVSGRLGGADMARTEFYSEGTIPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYG A A T YG G+KV++ + + +
Sbjct: 180 DIDYGFAEANTTYGKVGVKVWIYKGEVLPEK 210
>gi|222823109|ref|YP_002574682.1| 30S ribosomal protein S3 [Campylobacter lari RM2100]
gi|254764519|sp|B9KEE6|RS3_CAMLR RecName: Full=30S ribosomal protein S3
gi|222538330|gb|ACM63431.1| 30S ribosomal protein S3 [Campylobacter lari RM2100]
Length = 233
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 111/232 (47%), Positives = 156/232 (67%), Gaps = 6/232 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N W SRWF + + ED KIR +L+ L AG+++IL+ERT
Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPTKANMAENIGEDYKIRTFLKRKLYYAGISQILVERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ V +ARPG+IIGKKG+D++ +RK+L N+ E+++++ E K +A L A+S+
Sbjct: 61 AKKLRVTVVAARPGIIIGKKGSDVDVLRKELQNLIGKEVNINIKEERKAGASAQLAAESV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+R+ FRRAMK+ +Q A + GA G+KV SGRL GAE++RTE YLEGRVPL TLRA
Sbjct: 121 ATQLEKRIAFRRAMKKVIQGAQKAGAKGIKVSVSGRLGGAEMARTEWYLEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV------SDSDSTIPAAEHRVVEKD 226
IDYG A A T YG+ GIKV++ + + ++ + PA + R +
Sbjct: 181 KIDYGFAEAHTTYGNIGIKVWIFKGEVLQKGVQPEKTEESAPAKKPRRARRG 232
>gi|125716991|ref|YP_001034124.1| 30S ribosomal protein S3 [Streptococcus sanguinis SK36]
gi|323350946|ref|ZP_08086604.1| 30S ribosomal protein S3 [Streptococcus sanguinis VMC66]
gi|152060910|sp|A3CK69|RS3_STRSV RecName: Full=30S ribosomal protein S3
gi|125496908|gb|ABN43574.1| 30S ribosomal protein S3, putative [Streptococcus sanguinis SK36]
gi|322122928|gb|EFX94634.1| 30S ribosomal protein S3 [Streptococcus sanguinis VMC66]
gi|324989996|gb|EGC21937.1| 30S ribosomal protein S3 [Streptococcus sanguinis SK353]
gi|324991821|gb|EGC23746.1| 30S ribosomal protein S3 [Streptococcus sanguinis SK405]
gi|324996289|gb|EGC28197.1| 30S ribosomal protein S3 [Streptococcus sanguinis SK678]
gi|325686411|gb|EGD28441.1| 30S ribosomal protein S3 [Streptococcus sanguinis SK72]
gi|325689225|gb|EGD31231.1| 30S ribosomal protein S3 [Streptococcus sanguinis SK115]
gi|325695804|gb|EGD37701.1| 30S ribosomal protein S3 [Streptococcus sanguinis SK150]
gi|325697982|gb|EGD39865.1| 30S ribosomal protein S3 [Streptococcus sanguinis SK160]
gi|327458437|gb|EGF04793.1| 30S ribosomal protein S3 [Streptococcus sanguinis SK1]
gi|327463717|gb|EGF10033.1| 30S ribosomal protein S3 [Streptococcus sanguinis SK1057]
gi|327467341|gb|EGF12841.1| 30S ribosomal protein S3 [Streptococcus sanguinis SK330]
gi|327471736|gb|EGF17177.1| 30S ribosomal protein S3 [Streptococcus sanguinis SK408]
gi|327490457|gb|EGF22239.1| 30S ribosomal protein S3 [Streptococcus sanguinis SK1058]
gi|328945211|gb|EGG39365.1| 30S ribosomal protein S3 [Streptococcus sanguinis SK1087]
Length = 217
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 147/215 (68%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L A ++ I IER
Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFVQKELADAAISTIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G +++ +R KL+ +T ++H+++ E+ +P+++A L+ + I
Sbjct: 60 VNKVNVSLHTAKPGMVIGKGGANVDALRAKLNKLTGKQVHINIIEIKRPDLDAHLVGEGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE+RV FRRA K+A+Q MR GA G+K SGRLNGA+++R+E Y EG VPL TLRA
Sbjct: 120 ARQLEQRVAFRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARSEGYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDY A+T YG G+KV++ + + +T
Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTK 214
>gi|227485519|ref|ZP_03915835.1| ribosomal protein S3 [Anaerococcus lactolyticus ATCC 51172]
gi|227236518|gb|EEI86533.1| ribosomal protein S3 [Anaerococcus lactolyticus ATCC 51172]
Length = 244
Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats.
Identities = 92/219 (42%), Positives = 148/219 (67%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP +R+GV W+S+WFA ++ LL ED+KIRE+++ + +AG+A I IER
Sbjct: 1 MGQKVNPKGYRVGVIKDWDSKWFADKKDFSDLLVEDVKIREFIKKYAFEAGIADIEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-TNSEIHLSVNEVPKPEINATLIAQS 119
N ++ V++ +PG++IG+ G +E+++ K+ + + ++V E+ +++A L+A++
Sbjct: 61 VNNLKVTVFTGKPGMVIGRGGAGVEELKAKIERLAPGKRVIINVEEIKYQDLSAQLVAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA QLE R+ FRRAMK+++Q MR GA G+K + SGRL GA+++R+E Y EG +PLQTLR
Sbjct: 121 IANQLENRIAFRRAMKQSIQRTMRAGAKGIKTMVSGRLGGADMARSEGYSEGTIPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
A+IDYG A A+T YG G KV++ + + +
Sbjct: 181 ANIDYGFAEADTEYGKIGCKVWIYKGEVLPGEKAEREPK 219
>gi|15676075|ref|NP_273206.1| 30S ribosomal protein S3 [Neisseria meningitidis MC58]
gi|121634022|ref|YP_974267.1| 30S ribosomal protein S3 [Neisseria meningitidis FAM18]
gi|161870909|ref|YP_001600089.1| 30S ribosomal protein S3 [Neisseria meningitidis 053442]
gi|218767162|ref|YP_002341674.1| 30S ribosomal protein S3 [Neisseria meningitidis Z2491]
gi|254805808|ref|YP_003084029.1| 30S ribosomal protein S3 [Neisseria meningitidis alpha14]
gi|304388949|ref|ZP_07370996.1| 30S ribosomal protein S3 [Neisseria meningitidis ATCC 13091]
gi|54039502|sp|P66551|RS3_NEIMB RecName: Full=30S ribosomal protein S3
gi|54041959|sp|P66550|RS3_NEIMA RecName: Full=30S ribosomal protein S3
gi|152060886|sp|A1KRH9|RS3_NEIMF RecName: Full=30S ribosomal protein S3
gi|189045022|sp|A9M3W0|RS3_NEIM0 RecName: Full=30S ribosomal protein S3
gi|7225366|gb|AAF40606.1| 30S ribosomal protein S3 [Neisseria meningitidis MC58]
gi|120865728|emb|CAM09457.1| 30S ribosomal protein S3 [Neisseria meningitidis FAM18]
gi|121051170|emb|CAM07441.1| 30S ribosomal protein S3 [Neisseria meningitidis Z2491]
gi|161596462|gb|ABX74122.1| 30S ribosomal protein S3 [Neisseria meningitidis 053442]
gi|254669350|emb|CBA08429.1| 30S ribosomal protein S3 [Neisseria meningitidis alpha14]
gi|254670747|emb|CBA06990.1| 30S ribosomal protein S3 [Neisseria meningitidis alpha153]
gi|254672677|emb|CBA06542.1| 30S ribosomal protein S3 [Neisseria meningitidis alpha275]
gi|261391684|emb|CAX49133.1| 30S ribosomal protein S3 [Neisseria meningitidis 8013]
gi|304337083|gb|EFM03270.1| 30S ribosomal protein S3 [Neisseria meningitidis ATCC 13091]
gi|308388364|gb|ADO30684.1| 30S ribosomal protein S3 [Neisseria meningitidis alpha710]
gi|316985678|gb|EFV64624.1| ribosomal protein S3 [Neisseria meningitidis H44/76]
gi|319411368|emb|CBY91779.1| 30S ribosomal protein S3 [Neisseria meningitidis WUE 2594]
gi|325129067|gb|EGC51916.1| ribosomal protein S3 [Neisseria meningitidis N1568]
gi|325131090|gb|EGC53813.1| ribosomal protein S3 [Neisseria meningitidis OX99.30304]
gi|325133060|gb|EGC55732.1| ribosomal protein S3 [Neisseria meningitidis M6190]
gi|325135154|gb|EGC57780.1| ribosomal protein S3 [Neisseria meningitidis M13399]
gi|325137206|gb|EGC59801.1| ribosomal protein S3 [Neisseria meningitidis M0579]
gi|325139038|gb|EGC61584.1| ribosomal protein S3 [Neisseria meningitidis ES14902]
gi|325141162|gb|EGC63662.1| ribosomal protein S3 [Neisseria meningitidis CU385]
gi|325143238|gb|EGC65577.1| ribosomal protein S3 [Neisseria meningitidis 961-5945]
gi|325145345|gb|EGC67622.1| ribosomal protein S3 [Neisseria meningitidis M01-240013]
gi|325197435|gb|ADY92891.1| ribosomal protein S3 [Neisseria meningitidis G2136]
gi|325199361|gb|ADY94816.1| ribosomal protein S3 [Neisseria meningitidis H44/76]
gi|325203017|gb|ADY98471.1| ribosomal protein S3 [Neisseria meningitidis M01-240149]
gi|325203268|gb|ADY98721.1| ribosomal protein S3 [Neisseria meningitidis M01-240355]
gi|325205241|gb|ADZ00694.1| ribosomal protein S3 [Neisseria meningitidis M04-240196]
gi|325207184|gb|ADZ02636.1| ribosomal protein S3 [Neisseria meningitidis NZ-05/33]
Length = 230
Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats.
Identities = 107/227 (47%), Positives = 160/227 (70%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRL V W S+WFA+ +++ +L +D+ +R YL+ L A V +++IER
Sbjct: 1 MGQKINPTGFRLAVTKDWASKWFAKSTDFSTVLKQDIDVRNYLRQKLANASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ RI ++SARPG++IGKKG DIE +++ L + +H+++ E+ +PE++A +IA I
Sbjct: 61 AKSARITIHSARPGVVIGKKGEDIEVLKRDLQVLMGVPVHVNIEEIRRPELDAQIIADGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+RV FRRAMKRA+Q+AMR GA G+K++ SGRLNGA+++R+E Y EGRVPL TLRA
Sbjct: 121 AQQLEKRVQFRRAMKRAMQNAMRSGAKGIKIMTSGRLNGADIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
++DY T+ A T YG G+KV+V + S + + + +++
Sbjct: 181 NVDYATSEAHTTYGVLGLKVWVYTEGNIKSSKPEHESKQRKAGRRNA 227
>gi|256390146|ref|YP_003111710.1| 30S ribosomal protein S3 [Catenulispora acidiphila DSM 44928]
gi|256356372|gb|ACU69869.1| ribosomal protein S3 [Catenulispora acidiphila DSM 44928]
Length = 292
Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats.
Identities = 103/225 (45%), Positives = 151/225 (67%), Gaps = 2/225 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FRLG+ + SRW+A Y + ED+ IR + + +AG++K+ IERT
Sbjct: 1 MGQKVNPHGFRLGITTDFKSRWYAD-KLYKDYVKEDVAIRRLMTEGMDRAGISKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR KL +T ++ L++ EV PE +A L+AQ I
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGKLEKLTAKQVQLNILEVRNPESDAQLVAQGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL +RV FRRAM++A+QS+M+ G G+KV SGRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLAQRVAFRRAMRKAIQSSMKAGVKGIKVQVSGRLGGAEMSRSEQYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV-SDSDSTIPAAEHRVVE 224
+IDYG A+T +G G+KV++ D + + AAE R
Sbjct: 180 NIDYGFYEAKTTFGRIGVKVWIYKGDVTSLSAQRALNAAEARAGR 224
>gi|297201735|ref|ZP_06919132.1| ribosomal protein S3 [Streptomyces sviceus ATCC 29083]
gi|197710890|gb|EDY54924.1| ribosomal protein S3 [Streptomyces sviceus ATCC 29083]
Length = 277
Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats.
Identities = 98/227 (43%), Positives = 152/227 (66%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FRLGV + SRW+A Y + ED+ IR + +++AG++K+ IERT
Sbjct: 1 MGQKVNPHGFRLGVTTDFKSRWYAD-KLYKDYVKEDVAIRRMMTSGMERAGISKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PE +A L+AQ++
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPETDAQLVAQAV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++++QSAM+ GA G+K+ GRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLSSRVSFRRAMRKSMQSAMKAGAKGIKIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
++DYG A+T +G G+KV++ D + ++ A R + +
Sbjct: 180 NVDYGFFEAKTTFGRIGVKVWIYKGDVKNIAEVRAENAAARAGNRPA 226
>gi|33866605|ref|NP_898164.1| 30S ribosomal protein S3 [Synechococcus sp. WH 8102]
gi|61215690|sp|Q7U4J4|RS3_SYNPX RecName: Full=30S ribosomal protein S3
gi|33633383|emb|CAE08588.1| 30S ribosomal protein S3 [Synechococcus sp. WH 8102]
Length = 242
Score = 255 bits (651), Expect = 3e-66, Method: Composition-based stats.
Identities = 98/220 (44%), Positives = 138/220 (62%), Gaps = 3/220 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KINP RLG+ SRW+A Y ALL ED +IR+++ AG++ +LI R
Sbjct: 1 MGHKINPTGLRLGITQEHRSRWYASSKSYPALLQEDDRIRKFIHKKYGSAGISDVLIARK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117
+ + +ARPG+++G++G+ IE++R + ++ ++V EV + + +A L+A
Sbjct: 61 ADQLEVELKTARPGVLVGRQGSGIEELRSGIQKTVGDRSRQVRINVVEVERVDGDAFLLA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ IAQQLE+RV FRR ++ AVQ A R G G+K+ SGRLNGAE++RTE EGRVPL T
Sbjct: 121 EYIAQQLEKRVAFRRTIRMAVQRAQRAGVLGLKIQVSGRLNGAEIARTEWTREGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
LRA IDY T VA T YG GIKV+V + + D IP
Sbjct: 181 LRADIDYATKVASTTYGVLGIKVWVFKGEVLGDEAPLIPV 220
>gi|319760335|ref|YP_004124273.1| 30S ribosomal protein S3 [Candidatus Blochmannia vafer str. BVAF]
gi|318039049|gb|ADV33599.1| 30S ribosomal protein S3 [Candidatus Blochmannia vafer str. BVAF]
Length = 235
Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats.
Identities = 101/208 (48%), Positives = 153/208 (73%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ W S W+A ++ L+ D ++R +L L +A +++I+IER
Sbjct: 1 MGQKVHPNGMRLGIIKFWYSTWYANNKDFSKNLNNDFEVRRFLTKELSKALISRIIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +Y+ARPG++IGKKG D+EK+R+K++ ++ L+++EV KPE++A L+A +I
Sbjct: 61 AKSMRVTIYTARPGIVIGKKGGDVEKLREKVAKISGVPTQLNISEVRKPELDAKLLADNI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRA+KRA QSA+R GA+G+K+ SGRL+GAE++RTE + EGRVPL TLRA
Sbjct: 121 ASQLERRVIFRRAIKRAAQSAIRLGAEGIKIEISGRLSGAEIARTEWHREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
+IDY + A T YG G+KV++ + +
Sbjct: 181 NIDYSLSEAYTTYGVLGVKVWIFKGEIL 208
>gi|289168726|ref|YP_003446995.1| 30S ribosomal protein S3 [Streptococcus mitis B6]
gi|288908293|emb|CBJ23135.1| 30S ribosomal protein S3 [Streptococcus mitis B6]
Length = 217
Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 146/215 (67%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L A V+ I IER
Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFIQKELADAAVSTIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G +++ +R L+ +T ++H+++ E+ +P+++A L+ + I
Sbjct: 60 VNKVNVSLHTAKPGMVIGKGGANVDALRAALNKLTGKQVHINIIEIKRPDLDAHLVGEGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE+RV FRRA K+A++ AMR GA G+K SGRLNGA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLEQRVAFRRAQKQAIRRAMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDY A+T YG G+KV++ + + +T
Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTK 214
>gi|134103258|ref|YP_001108919.1| 30S ribosomal protein S3 [Saccharopolyspora erythraea NRRL 2338]
gi|291007949|ref|ZP_06565922.1| 30S ribosomal protein S3 [Saccharopolyspora erythraea NRRL 2338]
gi|152060902|sp|A4FPL9|RS3_SACEN RecName: Full=30S ribosomal protein S3
gi|133915881|emb|CAM05994.1| 30S ribosomal protein S3 [Saccharopolyspora erythraea NRRL 2338]
Length = 298
Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats.
Identities = 100/220 (45%), Positives = 145/220 (65%), Gaps = 2/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG+ W SRW+A +Y + ED+KIR L +++AG++K+ IERT
Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYSEYVAEDVKIRRRLSRGMERAGISKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV E +A L+AQ +
Sbjct: 60 RERVRVDIHTARPGIVIGRRGAEADRIRGSLEKLTGKQVQLNILEVKNAEADAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMR-FGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAMR G++V GRL GAE+SR+E Y EGRVPL TLR
Sbjct: 120 AEQLSNRVSFRRAMRKAIQSAMRSPQVKGIRVQCGGRLGGAEMSRSEFYREGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
A IDYG A T +G G+KV++ + V +E
Sbjct: 180 ADIDYGFFEARTTFGRIGVKVWIYKGELVGGLKQKQQESE 219
>gi|296272646|ref|YP_003655277.1| 30S ribosomal protein S3 [Arcobacter nitrofigilis DSM 7299]
gi|296096820|gb|ADG92770.1| ribosomal protein S3 [Arcobacter nitrofigilis DSM 7299]
Length = 232
Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats.
Identities = 112/225 (49%), Positives = 154/225 (68%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N W SRWF + S A + ED KIR++++ L AG+A+ LIERT
Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPKFSSMPANVAEDSKIRKFVKKELYYAGIAQTLIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ V +ARPG+IIGKKG D+EK++ L+ + EI +++ E KP+++ L A+++
Sbjct: 61 AKKVRVTVVAARPGIIIGKKGADVEKLKNSLTKLVGKEIAVNIKEERKPQLSGQLAAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKR +Q+A++ GA G+KV SGRL GAE++RTE YLEGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRVMQNAIKGGAKGIKVSVSGRLGGAEMARTEWYLEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDYG A A T YG G+KV++ + ++ + +
Sbjct: 181 RIDYGFAEAHTTYGCVGVKVWIFKGEVLAKGIPVEKEEAAKPKRR 225
>gi|227832225|ref|YP_002833932.1| 30S ribosomal protein S3 [Corynebacterium aurimucosum ATCC 700975]
gi|262183920|ref|ZP_06043341.1| 30S ribosomal protein S3 [Corynebacterium aurimucosum ATCC 700975]
gi|254764525|sp|C3PKQ8|RS3_CORA7 RecName: Full=30S ribosomal protein S3
gi|227453241|gb|ACP31994.1| 30S ribosomal protein S3 [Corynebacterium aurimucosum ATCC 700975]
Length = 248
Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats.
Identities = 105/215 (48%), Positives = 151/215 (70%), Gaps = 2/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P RLG+ W + W+A +Y + ED+KIREYL+ L +AG+A ++IERT
Sbjct: 1 MGQKIHPHGLRLGITSDWKTHWYAD-KDYANYVAEDIKIREYLEKGLDRAGIADVVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR++L +T + L++ EV + + NATL+AQS+
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRRELEKLTGKMVALNILEVKQVDANATLVAQSV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAM + G+K++ SGRL GAE+SRTE Y EGRVPL TLR
Sbjct: 120 AEQLVNRVAFRRAMRKAIQSAMRQPQVKGIKILLSGRLGGAEMSRTERYHEGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
A IDYGTA A T +G GIKV++ D V +
Sbjct: 180 AEIDYGTAEAHTTFGRIGIKVWIYKGDVVGGVRES 214
>gi|169350801|ref|ZP_02867739.1| hypothetical protein CLOSPI_01575 [Clostridium spiroforme DSM 1552]
gi|169292387|gb|EDS74520.1| hypothetical protein CLOSPI_01575 [Clostridium spiroforme DSM 1552]
Length = 217
Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats.
Identities = 99/214 (46%), Positives = 145/214 (67%), Gaps = 1/214 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ R+G+N W+SRW+A ++ LLHED+KIREYL LK A VA++ IER+
Sbjct: 1 MGQKVSPVGLRVGINRNWDSRWYANDQDFAGLLHEDIKIREYLLKKLKTASVARVEIERS 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119
I V+++RPG++IGK G ++ +RK++S M ++ +++ E+ P++ A L+A +
Sbjct: 61 KNRVTIFVHTSRPGVVIGKDGEAVDALRKEVSKMVKDKQVFINIVEIKNPDVVAQLVANN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA+QLE R FR KRA+Q AMR GA G+K SGRL GA+++R E Y EG VPL TLR
Sbjct: 121 IAEQLENRASFRTVQKRAIQRAMRAGAKGIKTSVSGRLGGADMARAEGYSEGNVPLHTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
A IDY TA A+T YG G+KV++ + + +
Sbjct: 181 ADIDYATAEADTTYGKLGVKVWICKGEILPEKKK 214
>gi|297564043|ref|YP_003683016.1| ribosomal protein S3 [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
gi|296848492|gb|ADH70510.1| ribosomal protein S3 [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
Length = 268
Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats.
Identities = 101/206 (49%), Positives = 143/206 (69%), Gaps = 1/206 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FRLGV + SRW+A Y + ED+ IR L +++AG++K+ IERT
Sbjct: 1 MGQKVNPHGFRLGVTTDFKSRWYAD-KSYKDYVKEDVAIRRMLTRGMERAGISKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ VY+ARPG++IG++G + ++IR L +T ++ L+V EV PEI+A L+AQ +
Sbjct: 60 RDRVRVDVYTARPGIVIGRRGVEADRIRTDLEKLTGKQVQLNVFEVKNPEIDAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++A+Q+AM+ GA G+++ GRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLSSRVAFRRAMRKAMQTAMKSGAKGIRIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRD 206
IDYG A T +G G+KV++ D
Sbjct: 180 DIDYGFFEARTTFGRIGVKVWIYKGD 205
>gi|32266883|ref|NP_860915.1| 30S ribosomal protein S3 [Helicobacter hepaticus ATCC 51449]
gi|61215709|sp|Q7VGD8|RS3_HELHP RecName: Full=30S ribosomal protein S3
gi|32262935|gb|AAP77981.1| ribosomal protein S3 [Helicobacter hepaticus ATCC 51449]
Length = 236
Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats.
Identities = 107/226 (47%), Positives = 153/226 (67%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N W+SRWF+ + + ED KIR++L+ + AGV++ +IER
Sbjct: 1 MGQKVNPIGLRLGINRNWSSRWFSVSQTTPSNILEDHKIRKFLKREMYYAGVSEFIIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ V ++RPGLIIGKKG DI+K ++ L + + E+ +++ E +P+ NA L A++I
Sbjct: 61 ANKIRVTVVASRPGLIIGKKGVDIDKHKEALKKILHKEVFINIKEAKRPQANAQLAAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV FRRAMK+ +Q+AM+ GA G+KV SGRL GAE++RTE Y+EGRVPL TLRA
Sbjct: 121 ATQLEKRVAFRRAMKKVMQAAMKAGAKGIKVKVSGRLAGAEMARTEWYMEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDYG A A T YG G+KV++ + + E + +K+
Sbjct: 181 KIDYGFAEAMTTYGIIGVKVWIFKGEVLHKGILPEKKEESKSGDKE 226
>gi|167755918|ref|ZP_02428045.1| hypothetical protein CLORAM_01438 [Clostridium ramosum DSM 1402]
gi|237733234|ref|ZP_04563715.1| 30S ribosomal protein S3 [Mollicutes bacterium D7]
gi|167703910|gb|EDS18489.1| hypothetical protein CLORAM_01438 [Clostridium ramosum DSM 1402]
gi|229383615|gb|EEO33706.1| 30S ribosomal protein S3 [Coprobacillus sp. D7]
Length = 217
Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats.
Identities = 102/214 (47%), Positives = 145/214 (67%), Gaps = 1/214 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+GVN W+SRW+A ++ LLHED+KIREYL LK A VAK+ IER+
Sbjct: 1 MGQKVSPIGLRVGVNRNWDSRWYANDQDFAGLLHEDIKIREYLLKKLKTASVAKVEIERS 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119
I V+++RPG++IGK G ++ +RK++S M ++ +++ E+ P++ A L+A +
Sbjct: 61 KNRVTIFVHTSRPGVVIGKDGEAVDALRKEVSKMVKDKQVFINIVEIKNPDVVAQLVANN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA+QLE R FR KRA+Q AMR GA G+K SGRL GA+++R E Y EG VPL TLR
Sbjct: 121 IAEQLENRASFRTVQKRAIQRAMRAGAKGIKTSVSGRLGGADMARAEGYSEGNVPLHTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
A IDY TA A+T YG G+KV++ + + +
Sbjct: 181 ADIDYATAEADTTYGKLGVKVWICKGEILPEKKK 214
>gi|325964160|ref|YP_004242066.1| 30S ribosomal protein S3P [Arthrobacter phenanthrenivorans Sphe3]
gi|323470247|gb|ADX73932.1| SSU ribosomal protein S3P [Arthrobacter phenanthrenivorans Sphe3]
Length = 277
Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats.
Identities = 101/230 (43%), Positives = 150/230 (65%), Gaps = 4/230 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQK+NP FRLG+ S WFA G Y + ED++IR+ + +++AG+AK+
Sbjct: 1 MGQKVNPHGFRLGITTDHVSHWFADSTKAGQRYKDFVREDIRIRQLMSTGMERAGIAKVE 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV PE+ A L+
Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQVQLNILEVKNPEMEAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ +A+QL RV FRRAMK+A+QSA R GA G+++ SGRL GAE+SR+E Y EGRVPL
Sbjct: 121 AQGVAEQLTSRVAFRRAMKKAMQSAQRAGAKGIRIACSGRLGGAEMSRSEFYREGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
TLRA+IDYG A+T +G G+KV++ D + + A+
Sbjct: 181 TLRANIDYGFYEAKTTFGRIGVKVWIYKGDVTAKELAQQAASAPSRGRSG 230
>gi|172056146|ref|YP_001812606.1| ribosomal protein S3 [Exiguobacterium sibiricum 255-15]
gi|226697712|sp|B1YGV6|RS3_EXIS2 RecName: Full=30S ribosomal protein S3
gi|171988667|gb|ACB59589.1| ribosomal protein S3 [Exiguobacterium sibiricum 255-15]
Length = 218
Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats.
Identities = 102/218 (46%), Positives = 146/218 (66%), Gaps = 2/218 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP R+G+ W SRWFA +Y LLHED +REY++ LK A V+K+ IER
Sbjct: 1 MGQKINPTGLRVGIIKDWESRWFAD-KDYADLLHEDYVVREYIEKRLKDASVSKVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-TNSEIHLSVNEVPKPEINATLIAQS 119
I +++A+PG++IGK G++IE +R ++N+ +H++V EV P+ A L+A++
Sbjct: 60 ANRLNISLHTAKPGMVIGKGGSEIETLRTDITNLAKGKRVHVNVVEVKNPDAVAKLVAEN 119
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA+QLE RV FRRAMK+++Q +MR G G+K SGRL GA+++R+E Y EG VPL TLR
Sbjct: 120 IARQLEGRVSFRRAMKQSIQRSMRSGIKGIKTEVSGRLGGADIARSEKYSEGTVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
A IDYGTA A+T YG G+KV++ + + +
Sbjct: 180 ADIDYGTAEADTTYGKIGVKVWLHHGEVLPTKKAASNE 217
>gi|322374051|ref|ZP_08048585.1| ribosomal protein S3 [Streptococcus sp. C150]
gi|321277017|gb|EFX54088.1| ribosomal protein S3 [Streptococcus sp. C150]
Length = 217
Score = 255 bits (651), Expect = 4e-66, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 148/215 (68%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L A V+ I IER
Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFIQKELADASVSTIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G++++ +R +L+ +T ++H+++ E+ KP+++A L+ ++I
Sbjct: 60 VNKVIVSLHTAKPGMVIGKGGSNVDALRVQLNKLTGKQVHINIVEIKKPDLDAHLVGETI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE+RV FRRA K+A+Q MR GA G+K SGRLNGA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLEQRVAFRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDY A+T YG G+KV++ + + +T
Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTK 214
>gi|157151263|ref|YP_001451229.1| 30S ribosomal protein S3 [Streptococcus gordonii str. Challis
substr. CH1]
gi|262283577|ref|ZP_06061342.1| ribosomal protein S3 [Streptococcus sp. 2_1_36FAA]
gi|172045618|sp|A8AZL9|RS3_STRGC RecName: Full=30S ribosomal protein S3
gi|157076057|gb|ABV10740.1| ribosomal protein S3 [Streptococcus gordonii str. Challis substr.
CH1]
gi|262260634|gb|EEY79335.1| ribosomal protein S3 [Streptococcus sp. 2_1_36FAA]
Length = 217
Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 146/215 (67%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L A V+ I IER
Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFVQKELADAAVSTIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G +++ +R KL+ +T ++H+++ E+ P+++A L+ + I
Sbjct: 60 VNKVNVSLHTAKPGMVIGKGGANVDALRAKLNKLTGKQVHINIIEIKSPDLDAHLVGEGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE+RV FRRA K+A+Q MR GA G+K SGRLNGA+++R+E Y EG VPL TLRA
Sbjct: 120 ARQLEQRVAFRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARSEGYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDY A+T YG G+KV++ + + +T
Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEILPARKNTK 214
>gi|319743989|gb|EFV96369.1| 30S ribosomal protein S3 [Streptococcus agalactiae ATCC 13813]
Length = 217
Score = 254 bits (650), Expect = 4e-66, Method: Composition-based stats.
Identities = 92/215 (42%), Positives = 146/215 (67%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+G+ W+++W+A EY LHEDL IR+++ L A V+ I IER
Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFINKELADASVSTIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G +++ +R +L+ +T ++H+++ E+ +P+++A L+ ++I
Sbjct: 60 VNKVIVSLHTAKPGIVIGKGGANVDALRGQLNKLTGKQVHINIIEIKQPDLDAHLVGENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE+RV FRRA K+A+Q MR GA G+K SGRLNGA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLEQRVAFRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDY A+T YG G+KV++ + + +T
Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTK 214
>gi|315222814|ref|ZP_07864700.1| ribosomal protein S3 [Streptococcus anginosus F0211]
gi|315188117|gb|EFU21846.1| ribosomal protein S3 [Streptococcus anginosus F0211]
Length = 217
Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 147/215 (68%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L A V+ I IER
Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFVQKELADAAVSTIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G +++ +R KL+ +T+ ++H+++ E+ P+++A L+ + I
Sbjct: 60 VNKVNVSLHTAKPGMVIGKGGANVDALRAKLNKLTSKQVHINIIEIKSPDLDAHLVGEGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE+RV FRRA K+A+Q MR GA G+K SGRLNGA+++R+E Y EG VPL TLRA
Sbjct: 120 ARQLEQRVAFRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARSEGYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDY A+T YG G+KV++ + + +T
Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTK 214
>gi|319893194|ref|YP_004150069.1| SSU ribosomal protein S3p (S3e) [Staphylococcus pseudintermedius
HKU10-03]
gi|317162890|gb|ADV06433.1| SSU ribosomal protein S3p (S3e) [Staphylococcus pseudintermedius
HKU10-03]
gi|323463758|gb|ADX75911.1| ribosomal protein S3 [Staphylococcus pseudintermedius ED99]
Length = 217
Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats.
Identities = 97/214 (45%), Positives = 149/214 (69%), Gaps = 1/214 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI R+GV W+++W+A ++ +LLHEDLKIR+++ LK A V+ + IER
Sbjct: 1 MGQKINPIGLRVGVIRDWDAKWYAE-KDFASLLHEDLKIRKFIDKALKDASVSHVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++ +PG++IGK G++IEK+R KL+ +T+ ++H++V E+ K +++A L+A++I
Sbjct: 60 ANRINIAIHTGKPGMVIGKGGSEIEKLRNKLNQLTDKKVHINVVEIKKVDLDARLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R FRR K+A+ AM+ GA G+K SGRL GA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLENRASFRRVQKQAIGRAMKLGAKGIKTQVSGRLGGADIARAEQYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
IDY A A+T YG G+KV++ + + ++
Sbjct: 180 DIDYAHAEADTTYGKLGVKVWIYRGEVLPTKKNS 213
>gi|291549410|emb|CBL25672.1| SSU ribosomal protein S3P [Ruminococcus torques L2-14]
Length = 218
Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats.
Identities = 99/211 (46%), Positives = 147/211 (69%), Gaps = 1/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+S+W+A ++ L ED +IR++L+ L AG++KI IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAE-KDFADNLVEDHEIRKFLKKRLYSAGISKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+IIVY+A+PG++IGK G++IEK++ +L+ T+ ++ + + EV +P+ +A L+A++I
Sbjct: 60 SDRVKIIVYTAKPGVVIGKGGSEIEKVKAELAQFTDKKLIVDIKEVKRPDKDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE R+ FRRAMK + M+ GA GVK SGRL GA+++RTE Y EG +PLQTLRA
Sbjct: 120 AQQLENRISFRRAMKSCMSRTMKAGALGVKTSVSGRLGGADMARTEFYSEGTIPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYG A A+T YG G+KV++ + +
Sbjct: 180 DIDYGFAEADTTYGKVGVKVWIYKGEVLPTK 210
>gi|325261500|ref|ZP_08128238.1| ribosomal protein S3 [Clostridium sp. D5]
gi|324032954|gb|EGB94231.1| ribosomal protein S3 [Clostridium sp. D5]
Length = 218
Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats.
Identities = 99/211 (46%), Positives = 148/211 (70%), Gaps = 1/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+S+W+A ++ L ED +IR++L+ L AGV++I IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAE-KDFADNLVEDHEIRKFLKKKLYSAGVSRIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +II+Y+A+PG++IGK G++IEK++ +L+ TN ++ + + EV +P+ +A L+A++I
Sbjct: 60 SERIKIIIYTAKPGVVIGKGGSEIEKVKAELTQYTNKKLIVDIKEVKRPDKDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE R+ FRRAMK + M+ GA GVK SGRL GA+++RTE Y EG +PLQTLRA
Sbjct: 120 AQQLENRISFRRAMKSCMSRTMKSGALGVKTSVSGRLGGADMARTEFYSEGTIPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYG A A+T YG G+KV++ + +
Sbjct: 180 DIDYGFAEADTTYGKVGVKVWIYKGEVLPTK 210
>gi|167748436|ref|ZP_02420563.1| hypothetical protein ANACAC_03180 [Anaerostipes caccae DSM 14662]
gi|317472031|ref|ZP_07931363.1| ribosomal protein S3 [Anaerostipes sp. 3_2_56FAA]
gi|167652428|gb|EDR96557.1| hypothetical protein ANACAC_03180 [Anaerostipes caccae DSM 14662]
gi|316900435|gb|EFV22417.1| ribosomal protein S3 [Anaerostipes sp. 3_2_56FAA]
Length = 218
Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats.
Identities = 101/214 (47%), Positives = 148/214 (69%), Gaps = 1/214 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+G+ W+SRW+A G + L ED KIR+Y++ L AG+++I IER
Sbjct: 1 MGQKVNPHGLRVGIIKDWDSRWYAEG-NFADNLVEDDKIRKYVKKKLYNAGISRIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++IVY+A+PG++IGK G+ IE+++K+L MT+ ++ + V EV +P+ +A L+A++I
Sbjct: 60 SDRVKLIVYTAKPGVVIGKGGSAIEELKKELQKMTDKKLLIDVKEVKRPDKDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE R+ FRRAMK +Q MR GA G+K SGRL GA+++RTE Y EG +PLQTLRA
Sbjct: 120 AQQLENRISFRRAMKSCMQRTMRSGAQGIKTSVSGRLGGADMARTEFYSEGTIPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
IDYG A A+T YG G+K ++ + + +
Sbjct: 180 DIDYGFAEADTTYGKVGVKTWIYHGEVLPTKEKQ 213
>gi|197303818|ref|ZP_03168854.1| hypothetical protein RUMLAC_02557 [Ruminococcus lactaris ATCC
29176]
gi|197297111|gb|EDY31675.1| hypothetical protein RUMLAC_02557 [Ruminococcus lactaris ATCC
29176]
Length = 218
Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats.
Identities = 99/211 (46%), Positives = 147/211 (69%), Gaps = 1/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+S+W+A ++ L ED +IR++L+ L AG++KI IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAE-KDFADNLVEDHEIRKFLKKRLYSAGISKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+IIVY+A+PG++IGK G++IEK++ +L+ T+ ++ + + EV +P+ +A L+A++I
Sbjct: 60 SDRVKIIVYTAKPGVVIGKGGSEIEKVKAELAQFTDKKLIVDIKEVKRPDKDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE R+ FRRAMK + M+ GA GVK SGRL GA+++RTE Y EG +PLQTLRA
Sbjct: 120 AQQLENRISFRRAMKSCMSRTMKAGALGVKTSVSGRLGGADMARTEFYSEGTIPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYG A A+T YG G+KV++ + +
Sbjct: 180 DIDYGFAEADTTYGKVGVKVWIYKGEVLPTK 210
>gi|215410263|ref|ZP_03419071.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis 94_M4241A]
gi|298524198|ref|ZP_07011607.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis 94_M4241A]
gi|298493992|gb|EFI29286.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis 94_M4241A]
Length = 212
Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats.
Identities = 101/208 (48%), Positives = 142/208 (68%), Gaps = 2/208 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG+ W SRW+A +Y + ED+ IR L L++AG+A + IERT
Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYAEYVKEDVAIRRLLSSGLERAGIADVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++GT+ ++IR L +T ++ L++ EV PE A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTGKQVQLNILEVKNPESQAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLR
Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDE 207
A IDYG A+T +G G+KV++ D
Sbjct: 180 ADIDYGLYEAKTTFGRIGVKVWIYKGDI 207
>gi|328955908|ref|YP_004373241.1| SSU ribosomal protein S3P [Coriobacterium glomerans PW2]
gi|328456232|gb|AEB07426.1| SSU ribosomal protein S3P [Coriobacterium glomerans PW2]
Length = 239
Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats.
Identities = 110/222 (49%), Positives = 150/222 (67%), Gaps = 4/222 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+ P FRLG+ W SRWFA +Y A + DL+IR YL L +A V+++ IER
Sbjct: 1 MGQKVYPTGFRLGITENWRSRWFAE-KDYAASIGNDLEIRRYLTKRLTRAAVSRVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPKPEINATLIA 117
+II+ S RPG++IGKKG +I+ +R +L + + + + V E+ +PEI+A L+A
Sbjct: 60 GDKVKIIILSGRPGIVIGKKGAEIDALRTELERVAGVSKGNLSIDVIEIRRPEIDAKLVA 119
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
QSIA+QLE RV FRRAM++AVQSA + GA G+++ SGRL G+E+ R E Y EGRVPL T
Sbjct: 120 QSIAEQLEGRVAFRRAMRKAVQSASKAGAKGIRIQCSGRLGGSEMGRREWYREGRVPLHT 179
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
LRA IDYGTA A T GSCG+KV++ L + + + PA E
Sbjct: 180 LRAKIDYGTATAHTTMGSCGVKVWIFLGERMPGQPTPNPALE 221
>gi|290958145|ref|YP_003489327.1| 30S ribosomal protein S3 [Streptomyces scabiei 87.22]
gi|260647671|emb|CBG70776.1| 30S ribosomal protein S3 [Streptomyces scabiei 87.22]
Length = 277
Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats.
Identities = 98/227 (43%), Positives = 152/227 (66%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FRLGV + SRW+A Y + ED+ IR + +++AG++K+ IERT
Sbjct: 1 MGQKVNPHGFRLGVTTDFKSRWYAD-KLYKDYVKEDVAIRRMMTSGMERAGISKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PE +A L+AQ++
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPETDAQLVAQAV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++++QSAM+ GA G+K+ GRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLSSRVSFRRAMRKSMQSAMKAGAKGIKIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
++DYG A+T +G G+KV++ D + ++ A R + +
Sbjct: 180 NVDYGFFEAKTTFGRIGVKVWIYKGDVKNIAEVRAENAAARAGNRPA 226
>gi|224417891|ref|ZP_03655897.1| 30S ribosomal protein S3 [Helicobacter canadensis MIT 98-5491]
gi|253827230|ref|ZP_04870115.1| 30S ribosomal protein S3 [Helicobacter canadensis MIT 98-5491]
gi|313141433|ref|ZP_07803626.1| 30S ribosomal protein S3 [Helicobacter canadensis MIT 98-5491]
gi|253510636|gb|EES89295.1| 30S ribosomal protein S3 [Helicobacter canadensis MIT 98-5491]
gi|313130464|gb|EFR48081.1| 30S ribosomal protein S3 [Helicobacter canadensis MIT 98-5491]
Length = 235
Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats.
Identities = 114/220 (51%), Positives = 152/220 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N W SRWF + + ED KIR++L+ L AGV+ ILIERT
Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPSFATAPQNVAEDYKIRKFLKKELYYAGVSDILIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ R+ V +ARPG+IIGKKG D+EK+++ L+ + N +I L++ EV KP+ NA L A+S+
Sbjct: 61 ARKVRVTVVAARPGIIIGKKGADVEKLKESLNKIVNKDIFLNIKEVKKPQSNAQLAAESV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV FRRAMK+ +Q AM+ GA G+KV SGRL GAE++RTE Y+EGR+PL TLRA
Sbjct: 121 ATQLERRVAFRRAMKKVMQGAMKSGAKGIKVKVSGRLAGAEMARTEWYMEGRIPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
IDYG A A T YG+ G+KV++ + + E
Sbjct: 181 KIDYGFAEALTTYGNIGVKVWIFKGEVLQKGIQAEKPQEE 220
>gi|254495717|ref|ZP_05108633.1| 30S ribosomal protein S3 [Legionella drancourtii LLAP12]
gi|254355064|gb|EET13683.1| 30S ribosomal protein S3 [Legionella drancourtii LLAP12]
Length = 218
Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats.
Identities = 112/219 (51%), Positives = 156/219 (71%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ WNS+WFA G Y L++D+K+R L+ L A V+KILIER
Sbjct: 1 MGQKVNPIGIRLGIIKDWNSKWFA-GKRYAEFLNQDIKLRSELKKKLMGAAVSKILIERP 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
N + + +ARPG+IIGKKG IE +R ++S +HL++ E+ KPE+++TL+A+SI
Sbjct: 60 ANNAVVTIQTARPGVIIGKKGGGIETLRNEISKKLGVPVHLNIEEIKKPELDSTLVAESI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+RV+FRRAMKRAV SA++ GA G+K+ SGRL GAE++R+E Y EGRVPL T RA
Sbjct: 120 AQQLEQRVMFRRAMKRAVTSALKSGAKGIKICVSGRLGGAEIARSEWYREGRVPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDYGTA ++T YG G+KV++ + + + +A+
Sbjct: 180 DIDYGTAESKTTYGIIGVKVWIFKGEVLPQKKRSTDSAQ 218
>gi|210611131|ref|ZP_03288745.1| hypothetical protein CLONEX_00935 [Clostridium nexile DSM 1787]
gi|210152118|gb|EEA83125.1| hypothetical protein CLONEX_00935 [Clostridium nexile DSM 1787]
Length = 218
Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats.
Identities = 98/211 (46%), Positives = 143/211 (67%), Gaps = 1/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+S+W+A + L ED KIR +L+ L AGV+KI IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAEDK-FADYLVEDHKIRTFLKKKLYSAGVSKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+II+Y+A+PG++IGK G +IEK++K+L T+ ++ + + E+ +P+ +A L+A++I
Sbjct: 60 SDRVKIIIYTAKPGVVIGKGGAEIEKVKKELQQFTDKKLVVDIKEIKRPDKDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE R+ FRRAMK + M+ GA G+K SGRL GA+++RTE Y EG +PLQTLRA
Sbjct: 120 ALQLENRISFRRAMKSCMSRTMKSGALGIKTAVSGRLGGADMARTEFYSEGTIPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYG A A+T YG G+KV++ + +
Sbjct: 180 DIDYGFAEADTTYGKVGVKVWIYKGEVLPTK 210
>gi|87300907|ref|ZP_01083749.1| 30S ribosomal protein S3 [Synechococcus sp. WH 5701]
gi|87284778|gb|EAQ76730.1| 30S ribosomal protein S3 [Synechococcus sp. WH 5701]
Length = 242
Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats.
Identities = 96/220 (43%), Positives = 136/220 (61%), Gaps = 3/220 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KI+P RLG+ SRW+A Y LL ED +IR ++ AG++ +LI R
Sbjct: 1 MGHKIHPTGLRLGITQDHRSRWYAPSKTYPTLLQEDDRIRCFIHKKYASAGISDVLIARK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIA 117
+ + +ARPG+++G++G+ IE++R +K N ++ ++V EV + + +A L+A
Sbjct: 61 ADQLEVELKTARPGVLVGRQGSGIEELRAGIQKTVGDRNRQVRINVVEVERVDADAFLLA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ IAQQLE+RV FRR M+ VQ A R G G+K+ SGRLNGAE++RTE EGRVPL T
Sbjct: 121 EYIAQQLEKRVAFRRVMRMTVQRAQRAGVLGLKIQVSGRLNGAEIARTEWTREGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
LRA IDY T VA T YG GIKV+V + + +P
Sbjct: 181 LRADIDYATKVATTTYGVLGIKVWVFKGEVLPGQQEKLPV 220
>gi|329770034|ref|ZP_08261429.1| 30S ribosomal protein S3 [Gemella sanguinis M325]
gi|328837345|gb|EGF86975.1| 30S ribosomal protein S3 [Gemella sanguinis M325]
Length = 217
Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats.
Identities = 102/215 (47%), Positives = 150/215 (69%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+GV W+S+W+A ++ A LHED KIRE++ LK A V+K+ IER
Sbjct: 1 MGQKVHPIGLRVGVIRDWDSKWYAE-KDFAANLHEDFKIREFISKQLKDASVSKVEIERF 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I V++ +PG++IGK G++I+K+R +L+ +T +H++V E+ K +I+A L+A++I
Sbjct: 60 DKKVNISVHTGKPGMVIGKGGSEIDKLRLELNKLTGKRVHINVVEIKKVDIDAKLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRA K+A+Q AMR GA G+K SGRL GA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLEARVSFRRAQKQAIQRAMRAGAKGIKTQVSGRLGGADIARAEHYSEGSVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
+IDY A+T YG G+KV+++ + + S
Sbjct: 180 NIDYAHEEADTTYGKLGVKVWINRGEVLPTRKSEK 214
>gi|54293327|ref|YP_125742.1| 30S ribosomal protein S3 [Legionella pneumophila str. Lens]
gi|61215403|sp|Q5WZK6|RS3_LEGPL RecName: Full=30S ribosomal protein S3
gi|53753159|emb|CAH14606.1| 30S ribosomal protein S3 [Legionella pneumophila str. Lens]
Length = 218
Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats.
Identities = 114/219 (52%), Positives = 156/219 (71%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ WNS+WFA G Y L +D+K+R L+ L A V+KILIER
Sbjct: 1 MGQKVNPIGIRLGIIKDWNSKWFA-GKRYAEFLIQDIKLRSDLKKKLMAAAVSKILIERP 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
N + + +ARPG+IIGKKG IE +RK++S+ +HL++ EV KPE++ATL+A+ I
Sbjct: 60 ANNAVVTILTARPGVIIGKKGGGIETLRKEISDSLGVPVHLNIEEVKKPELDATLVAEGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+RV+FRRAMKRAV SA++ GA G+K+ SGRL GAE++R+E Y EGRVPL T RA
Sbjct: 120 AQQLEQRVMFRRAMKRAVTSALKAGAKGIKICVSGRLGGAEIARSEWYREGRVPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDYGTA ++T YG G+KV++ + + + +A+
Sbjct: 180 DIDYGTAESKTTYGIIGVKVWIFKGEILPQKKRSTESAQ 218
>gi|313889579|ref|ZP_07823224.1| ribosomal protein S3 [Streptococcus pseudoporcinus SPIN 20026]
gi|313122088|gb|EFR45182.1| ribosomal protein S3 [Streptococcus pseudoporcinus SPIN 20026]
Length = 217
Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 147/215 (68%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L +A V+ I IER
Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLSIRKFIQKELAEASVSTIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G +++ +R +L+ +T ++H+++ E+ P+++A L+ ++I
Sbjct: 60 INKVIVSLHTAKPGMVIGKGGANVDTLRAQLNKLTGKQVHINIIEIKSPDLDAHLVGENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE+RV FRRA K+A+Q MR GA G+K SGRLNGA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLEQRVAFRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDY A+T YG G+KV++ + + +T
Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPARKNTK 214
>gi|302536257|ref|ZP_07288599.1| ribosomal protein S3 [Streptomyces sp. C]
gi|302445152|gb|EFL16968.1| ribosomal protein S3 [Streptomyces sp. C]
Length = 279
Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats.
Identities = 95/227 (41%), Positives = 151/227 (66%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FRLG+ + SRW+A Y + ED+ IR + +++AG++K+ IERT
Sbjct: 1 MGQKVNPHGFRLGITTDFKSRWYAD-KLYKDYVKEDVAIRRMMTSGMERAGISKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PE++A L+AQ++
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPELDAQLVAQAV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++++Q M+ GA G+K+ GRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLSSRVSFRRAMRKSMQGTMKAGAKGIKIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
++DYG A+T +G G+KV++ D + ++ A R + +
Sbjct: 180 NVDYGFFEAKTTFGRIGVKVWIYKGDVKNIAEVRAENAAARAGNRPA 226
>gi|266620257|ref|ZP_06113192.1| ribosomal protein S3 [Clostridium hathewayi DSM 13479]
gi|288868160|gb|EFD00459.1| ribosomal protein S3 [Clostridium hathewayi DSM 13479]
Length = 218
Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats.
Identities = 96/211 (45%), Positives = 146/211 (69%), Gaps = 1/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+S+W+A +++ L ED K+R YL+ L AGV+ I IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAE-ADFADNLVEDYKLRTYLKKRLYSAGVSDIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+II+++A+PG++IGK G++IEK++ ++ MT+ ++ + + E+ +P+ +A L+A+SI
Sbjct: 60 SDRVKIIIHTAKPGVVIGKGGSEIEKLKAEVQKMTDKKLFVDIKEIKRPDKDAQLVAESI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE RV FRRAMK + +M+ G G+K +GRL GA+++RTE Y EG +PLQTLRA
Sbjct: 120 AQQLENRVSFRRAMKSTMGRSMKAGVKGIKTAVAGRLGGADMARTEFYSEGTIPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYG A A+T YG G+KV++ + +
Sbjct: 180 DIDYGFAEADTTYGKVGVKVWIYKGEILPTK 210
>gi|45644699|gb|AAS73087.1| predicted ribosomal protein S3 [uncultured marine gamma
proteobacterium EBAC20E09]
Length = 219
Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats.
Identities = 104/207 (50%), Positives = 151/207 (72%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FRLG++ N+ W+A+G ++ L +DLK+RE++ LK + ++K+ +ER
Sbjct: 1 MGQKVNPNGFRLGISKKQNANWYAKGKDFSNNLIQDLKVREFINNRLKNSSISKVELERN 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +Y+ARPG+IIGK+G +IE ++KK+ + S +++ EV KP+++A ++A+ +
Sbjct: 61 ADTFIVNIYTARPGIIIGKRGEEIENLKKKIEKIVKSSTQINIKEVRKPDLDAKILAEGV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+RV+FRRAMKR VQSA+R A GV++ SGRLNGAE++RTE Y EGRVPL TLRA
Sbjct: 121 AQQLEKRVMFRRAMKRTVQSALRQSAKGVRIEVSGRLNGAEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207
IDYGTA A T YG G+KV+V +
Sbjct: 181 DIDYGTAEALTTYGIIGVKVWVYRGEI 207
>gi|28212171|ref|NP_783115.1| 30S ribosomal protein S3 [Clostridium tetani E88]
gi|61215763|sp|Q890P3|RS3_CLOTE RecName: Full=30S ribosomal protein S3
gi|28204615|gb|AAO37052.1| SSU ribosomal protein S3P [Clostridium tetani E88]
Length = 222
Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats.
Identities = 95/220 (43%), Positives = 142/220 (64%), Gaps = 2/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+GV W+++W+A + L ED IR +++ + AG++KI IER
Sbjct: 1 MGQKVHPHGLRVGVIKDWDAKWYADKKNFSDNLVEDNNIRNFVKKKVYAAGISKIEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLIAQ 118
K ++ +Y+A+PG++IGK G IE ++ +L N+ N I +++ EV E +A L+A+
Sbjct: 61 GKRVKLNIYTAKPGMVIGKGGQGIEALKGELKNIVSDNKNILINIVEVKSAETDAQLMAE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
++AQQLE+R+ FRRAMK+ +Q AM+ G GVK SGRL GA+++RTE Y EG +PLQTL
Sbjct: 121 NVAQQLEKRISFRRAMKQTIQRAMKSGIKGVKTACSGRLGGADIARTEFYHEGTIPLQTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
RA IDYG A A+T YG G+KV+V + +
Sbjct: 181 RADIDYGFAEADTTYGKIGVKVWVYKGEVLPAKKEVKEEV 220
>gi|254449319|ref|ZP_05062764.1| ribosomal protein S3 [gamma proteobacterium HTCC5015]
gi|198261078|gb|EDY85378.1| ribosomal protein S3 [gamma proteobacterium HTCC5015]
Length = 228
Score = 254 bits (650), Expect = 5e-66, Method: Composition-based stats.
Identities = 107/228 (46%), Positives = 158/228 (69%), Gaps = 3/228 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+NP RLG+ W ++W+A EY L+ D+++R++++ L+QA V++I IER
Sbjct: 1 MGHKVNPTGIRLGIATDWTAKWYAERGEYAENLYSDIQVRDFIRKRLEQAAVSRIQIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117
K I +++ARPG++IGKKG DIE++R++++ + I +++ E+ KPE++ATL A
Sbjct: 61 AKQAVITIHTARPGVVIGKKGEDIERLRQEVAKLMQVPPQAIKVNIEEIRKPELDATLTA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
QS+AQQLERR++FRRAM+RAV +AMR GA G+K+ GRLNGAE++RTE Y EGRVPL T
Sbjct: 121 QSVAQQLERRIMFRRAMRRAVGNAMRLGAQGIKINVGGRLNGAEIARTEWYREGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
LRA IDYGTA A T YG G+KV++ + +A + ++
Sbjct: 181 LRADIDYGTAEASTTYGIIGVKVWIYKGEVFDFEAKRNKSAGDKSAKQ 228
>gi|297625788|ref|YP_003687551.1| 30S ribosomal protein S3 [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296921553|emb|CBL56107.1| 30S ribosomal protein S3 [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 272
Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats.
Identities = 105/207 (50%), Positives = 143/207 (69%), Gaps = 1/207 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI FRLG+ SRW+A +Y L+ ED KIR +L +L++AG++ + IER
Sbjct: 1 MGQKINPIGFRLGITTDHKSRWYAE-KQYSELVGEDDKIRAWLVKNLERAGISSVEIERR 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +Y+ARPG++IG+ G + E++R +L M+ +I L++ EV PE +A L+AQ I
Sbjct: 60 SDRITIFLYAARPGIVIGRNGAEAERVRGELEKMSGKQIQLNILEVKNPETDAQLVAQGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++A QSAMR GA G+++ SGRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLGARVAFRRAMRKAQQSAMRSGAKGIRIRCSGRLGGAEMSRSESYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207
IDYG A T +G G+KV++ D
Sbjct: 180 DIDYGFYEARTTFGRIGVKVWIYKGDV 206
>gi|254383166|ref|ZP_04998520.1| 30S ribosomal protein S3 [Streptomyces sp. Mg1]
gi|194342065|gb|EDX23031.1| 30S ribosomal protein S3 [Streptomyces sp. Mg1]
Length = 280
Score = 254 bits (650), Expect = 6e-66, Method: Composition-based stats.
Identities = 95/227 (41%), Positives = 151/227 (66%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FRLG+ + SRW+A Y + ED+ IR + +++AG++K+ IERT
Sbjct: 1 MGQKVNPHGFRLGITTDFKSRWYAD-KLYKDYVKEDVAIRRMMTSGMERAGISKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PE++A L+AQ++
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPELDAQLVAQAV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++++Q M+ GA G+K+ GRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLSSRVSFRRAMRKSMQGTMKAGAKGIKIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
++DYG A+T +G G+KV++ D + ++ A R + +
Sbjct: 180 NVDYGFFEAKTTFGRIGVKVWIYKGDVKNIAEVRAENAAARAGNRPA 226
>gi|52840580|ref|YP_094379.1| 30S ribosomal protein S3 [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|54296371|ref|YP_122740.1| 30S ribosomal protein S3 [Legionella pneumophila str. Paris]
gi|148361047|ref|YP_001252254.1| 30S ribosomal protein S3 [Legionella pneumophila str. Corby]
gi|296105884|ref|YP_003617584.1| small subunit ribosomal protein S3 [Legionella pneumophila 2300/99
Alcoy]
gi|61215411|sp|Q5X853|RS3_LEGPA RecName: Full=30S ribosomal protein S3
gi|61215431|sp|Q5ZYN7|RS3_LEGPH RecName: Full=30S ribosomal protein S3
gi|189045016|sp|A5IHQ8|RS3_LEGPC RecName: Full=30S ribosomal protein S3
gi|52627691|gb|AAU26432.1| 30S ribosomal protein S3 [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|53750156|emb|CAH11548.1| 30S ribosomal protein S3 [Legionella pneumophila str. Paris]
gi|148282820|gb|ABQ56908.1| 30S ribosomal protein S3 [Legionella pneumophila str. Corby]
gi|295647785|gb|ADG23632.1| small subunit ribosomal protein S3 [Legionella pneumophila 2300/99
Alcoy]
gi|307609144|emb|CBW98599.1| 30S ribosomal protein S3 [Legionella pneumophila 130b]
Length = 218
Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats.
Identities = 114/219 (52%), Positives = 156/219 (71%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ WNS+WFA G Y L +D+K+R L+ L A V+KILIER
Sbjct: 1 MGQKVNPIGIRLGIIKDWNSKWFA-GKRYAEFLIQDIKLRNDLKKKLMAAAVSKILIERP 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
N + + +ARPG+IIGKKG IE +RK++S+ +HL++ EV KPE++ATL+A+ I
Sbjct: 60 ANNAVVTILTARPGVIIGKKGGGIETLRKEISDNLGVPVHLNIEEVKKPELDATLVAEGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+RV+FRRAMKRAV SA++ GA G+K+ SGRL GAE++R+E Y EGRVPL T RA
Sbjct: 120 AQQLEQRVMFRRAMKRAVTSALKAGAKGIKICVSGRLGGAEIARSEWYREGRVPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDYGTA ++T YG G+KV++ + + + +A+
Sbjct: 180 DIDYGTAESKTTYGIIGVKVWIFKGEILPQKKRSTESAQ 218
>gi|163840900|ref|YP_001625305.1| SSU ribosomal protein S3P [Renibacterium salmoninarum ATCC 33209]
gi|189045322|sp|A9WSV3|RS3_RENSM RecName: Full=30S ribosomal protein S3
gi|162954376|gb|ABY23891.1| SSU ribosomal protein S3P [Renibacterium salmoninarum ATCC 33209]
Length = 282
Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats.
Identities = 103/228 (45%), Positives = 150/228 (65%), Gaps = 4/228 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE----YGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQK+NP FRLG+ S WFA ++ Y + ED+KIR+ + +++AG+AK+
Sbjct: 1 MGQKVNPHGFRLGITTNHVSHWFADSNKAGQRYKDFVREDIKIRQLMSTGMERAGIAKVE 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV PE+ A L+
Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQVQLNILEVKNPEMEAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ IA+QL RV FRRAMK+A+QSA R GA G++V SGRL GAE+SR+E Y EGRVPL
Sbjct: 121 AQGIAEQLSSRVAFRRAMKKAMQSAQRAGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
TLRA IDYG A+T +G G+KV++ D + + A+
Sbjct: 181 TLRAQIDYGFFEAKTTFGRIGVKVWIYKGDVTAKELAQQAASAPSRGR 228
>gi|118602219|ref|YP_903434.1| SSU ribosomal protein S3P [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|152060901|sp|A1AVK6|RS3_RUTMC RecName: Full=30S ribosomal protein S3
gi|118567158|gb|ABL01963.1| SSU ribosomal protein S3P [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 232
Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats.
Identities = 102/221 (46%), Positives = 152/221 (68%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP RLG+ W+S+W+A +Y L D+K+R+YL L A V++I IER
Sbjct: 1 MGQKVNPKGIRLGIVKDWDSKWYANSQDYSKYLLSDIKVRDYLFDKLTNASVSRIQIERL 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
N +I +++ARPG+IIGKKG DIE+++ +S M +H+++ E+ KPE++A L+A++I
Sbjct: 61 ANNAKITIHTARPGIIIGKKGADIEQLKSIVSKMMGIPVHINIEEIKKPELDARLVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+RV++RRA+KR + + R GA G+KV+ +GRLNGAE++R+E Y EGRVPL T RA
Sbjct: 121 AQQLEKRVMYRRAVKRVLGNTTRLGAKGIKVMVNGRLNGAEIARSEWYREGRVPLHTFRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
+DY + A T YG GIKV++ + ++ T+ R
Sbjct: 181 DVDYSSYGANTQYGVIGIKVWIFKGEILNHKKGTLDEVARR 221
>gi|261380565|ref|ZP_05985138.1| ribosomal protein S3 [Neisseria subflava NJ9703]
gi|284796533|gb|EFC51880.1| ribosomal protein S3 [Neisseria subflava NJ9703]
Length = 230
Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats.
Identities = 107/222 (48%), Positives = 157/222 (70%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRL V W+S+WFA+ +++ +L +D+ +R YL+ L A V +++IER
Sbjct: 1 MGQKINPTGFRLAVTKDWSSKWFAKSTDFSTVLKQDIDVRNYLRKKLANASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ RI ++SARPG++IGKKG DIE +++ L + +H+++ E+ +PE++A +IA I
Sbjct: 61 AKSARITIHSARPGVVIGKKGEDIEILKRDLQTLMGVPVHVNIEEIRRPELDAQIIADGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+RV FRRAMKRA+Q+AMR GA G+K++ SGRLNGA+++R+E Y EGRVPL TLRA
Sbjct: 121 AQQLEKRVQFRRAMKRAMQNAMRSGAKGIKIMTSGRLNGADIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
++DY T+ A T YG G+KV+V + S + +
Sbjct: 181 NVDYATSEAHTTYGVLGLKVWVYTEGNIKSSKPEHEKKQRKA 222
>gi|239623353|ref|ZP_04666384.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239522319|gb|EEQ62185.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 218
Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats.
Identities = 94/211 (44%), Positives = 146/211 (69%), Gaps = 1/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+S+W+A +++ L ED IR++L+ L AG++KI IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAE-ADFADCLVEDYNIRKFLKKRLFSAGISKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++I+Y+A+PG++IGK G++IEK++K++ +T+ ++ + + E+ +P+ +A L+A+SI
Sbjct: 60 SDRVKVIIYTAKPGVVIGKGGSEIEKLKKEVQKLTDKKLFVDIKEIKRPDKDAQLVAESI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE RV FRRAMK + M+ G G+K +GRL GA+++RTE Y EG +PLQTLRA
Sbjct: 120 ASQLENRVSFRRAMKSTMGRTMKAGVKGIKTAVAGRLGGADIARTEFYSEGTIPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYG A A+T YG G+KV++ + +
Sbjct: 180 DIDYGFAEADTTYGKLGVKVWIYKGEVLPTK 210
>gi|78484646|ref|YP_390571.1| ribosomal protein S3 [Thiomicrospira crunogena XCL-2]
gi|91207847|sp|Q31IX6|RS3_THICR RecName: Full=30S ribosomal protein S3
gi|78362932|gb|ABB40897.1| SSU ribosomal protein S3P [Thiomicrospira crunogena XCL-2]
Length = 228
Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats.
Identities = 107/208 (51%), Positives = 149/208 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI RLG+ WN+RW+A Y L D++IR+ L LK A V++I IER
Sbjct: 1 MGQKVHPIGIRLGITKDWNARWYADSKNYSDFLISDIEIRKELNEKLKHASVSQINIERV 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IGKKG DIEK+++ L T +++++ E+ KPE++A L+A+ I
Sbjct: 61 ANGVRVTIHTARPGVVIGKKGEDIEKLKQALIAKTGMPVNINIEEIKKPELDAKLVAEGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+R+ FRRAMKRAV +AMR GA G+KV SGRLNGAE++R E Y EGRVPL TLRA
Sbjct: 121 AQQLEKRIQFRRAMKRAVSNAMRLGAQGIKVNVSGRLNGAEIARAEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
IDY T A+T YG G+KV++ +++
Sbjct: 181 DIDYATFEADTTYGKIGVKVWIFKGEKL 208
>gi|302036671|ref|YP_003796993.1| 30S ribosomal protein S3 [Candidatus Nitrospira defluvii]
gi|300604735|emb|CBK41067.1| 30S ribosomal protein S3 [Candidatus Nitrospira defluvii]
Length = 222
Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats.
Identities = 103/209 (49%), Positives = 155/209 (74%), Gaps = 1/209 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +PI +R+G N TW+SRW+A +Y LLH+D+KIR+ ++ L AGVAK+ IER+
Sbjct: 1 MGQKTHPIGYRIGYNYTWSSRWYAD-KDYARLLHQDIKIRKMVKAKLYHAGVAKVEIERS 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+I+++ARPG+IIG+KG +++K++ L + + +++V E+ KPE++A L+++++
Sbjct: 60 GDQTRVIIHTARPGIIIGRKGAEVDKLKAALEKEYSGQAYITVKEIKKPELDAQLVSENV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV FRRAMKR+VQSA+R GA G+K++ +GRL GAE++RTE Y EGRVPL TLRA
Sbjct: 120 ATQLEKRVAFRRAMKRSVQSALRLGAQGIKIMVAGRLGGAEIARTEWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVS 209
+DYG A A T G G+K ++ + +
Sbjct: 180 EVDYGFAEAHTTMGQIGVKTWIYKGELLP 208
>gi|289565366|ref|ZP_06445816.1| 30S ribosomal protein S3 [Enterococcus faecium D344SRF]
gi|289162856|gb|EFD10706.1| 30S ribosomal protein S3 [Enterococcus faecium D344SRF]
Length = 223
Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats.
Identities = 95/217 (43%), Positives = 147/217 (67%), Gaps = 1/217 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+G+ W+++W+A EY LHEDL+IR+++ L A V+ + IER
Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYAEFLHEDLRIRKFISTKLADAAVSTVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK G+++E +RK+L+ +T IH+++ E+ KP+++A L+ + I
Sbjct: 60 TGRVNISIHTAKPGMVIGKGGSEVESLRKELNKLTGKRIHINIVEIKKPDLDAKLVGEGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRA K+A+Q +MR GA G+K SGRLNGA+++R+E Y EG VPL TLRA
Sbjct: 120 ARQLENRVAFRRAQKQAIQRSMRAGAQGIKTQVSGRLNGADIARSEGYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
IDY A+T YG G+KV++ + + +
Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEILPTKKTLRKE 216
>gi|187934093|ref|YP_001884479.1| 30S ribosomal protein S3 [Clostridium botulinum B str. Eklund 17B]
gi|226697685|sp|B2TII1|RS3_CLOBB RecName: Full=30S ribosomal protein S3
gi|187722246|gb|ACD23467.1| 30S ribosomal protein S3 [Clostridium botulinum B str. Eklund 17B]
Length = 221
Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats.
Identities = 100/219 (45%), Positives = 146/219 (66%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+GV W+++W+A ++ L ED +IR++++ L AG++KI IER
Sbjct: 1 MGQKVHPHGLRVGVIKGWDAKWYANKKDFADNLVEDNQIRKFVKKELFSAGISKIEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN-MTNSEIHLSVNEVPKPEINATLIAQS 119
K ++ +Y+A+PG++IGK G+ IE ++KKL+N ++ I +++ EV E A L+A++
Sbjct: 61 AKRVKLNIYTAKPGVVIGKGGSGIESLKKKLTNYISGKNILINIVEVKSVEAEAQLMAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA QLE+R+ FRRAMK+ +Q AMR G GVK SGRL GAE++RTE Y EG +PLQTLR
Sbjct: 121 IAAQLEKRISFRRAMKQTMQRAMRHGIKGVKTSCSGRLGGAEIARTEHYHEGTIPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
A IDYG A A T YG G+KV+V + + A
Sbjct: 181 ADIDYGFAEANTTYGKIGVKVWVYKGEVLPTKKVEKEEA 219
>gi|150015049|ref|YP_001307303.1| 30S ribosomal protein S3 [Clostridium beijerinckii NCIMB 8052]
gi|189044968|sp|A6LPR7|RS3_CLOB8 RecName: Full=30S ribosomal protein S3
gi|149901514|gb|ABR32347.1| ribosomal protein S3 [Clostridium beijerinckii NCIMB 8052]
Length = 221
Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats.
Identities = 99/219 (45%), Positives = 141/219 (64%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+++W+A + L ED KIR++++ L AG++KI IER
Sbjct: 1 MGQKVNPHGLRVGVIKGWDAKWYANKKNFADNLIEDNKIRKFVKKELFSAGISKIEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEK-IRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
K ++ +Y+A+PG+IIGK G+ IE K + N + +++ EV E +A L+A++
Sbjct: 61 AKRVKLNIYTAKPGVIIGKGGSGIEALKNKLTQFVENKNVLINIVEVKSAEADAQLMAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA QLE+R+ FRRAMK+ +Q AM+ G GVK SGRL GAE++RTE Y EG +PLQTLR
Sbjct: 121 IAAQLEKRISFRRAMKQTMQRAMKHGIKGVKTACSGRLGGAEIARTEHYHEGTIPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
A IDYG A A+T YG G+KV+V + + A
Sbjct: 181 ADIDYGFAEADTTYGKIGVKVWVYNGEVLPTKKVEKEEA 219
>gi|262197182|ref|YP_003268391.1| ribosomal protein S3 [Haliangium ochraceum DSM 14365]
gi|262080529|gb|ACY16498.1| ribosomal protein S3 [Haliangium ochraceum DSM 14365]
Length = 223
Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats.
Identities = 101/224 (45%), Positives = 154/224 (68%), Gaps = 1/224 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +PI FRLGV TW+S+W+ Y LHEDLK++ +++ L+ A V+ I +ER
Sbjct: 1 MGQKTHPIGFRLGVIKTWSSKWY-EEKNYSKWLHEDLKLKRFIKRKLQHAAVSYIDVERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I +Y+ARPG++IGK+G +E +++ + ++T++E+ L++ EV K E NA L+A++I
Sbjct: 60 ANKAKINIYTARPGIVIGKRGAGVETLKRDVQSLTDNEVFLNIVEVRKAETNAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR+ FRRAMK+AVQ+AM+FG G++V ++GRL G+E+SR E Y EGRVPL TLRA
Sbjct: 120 ATQLERRIAFRRAMKKAVQTAMKFGCKGIRVASAGRLGGSEMSRREWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
IDYG A+T YG+ G+K ++ + + + ++
Sbjct: 180 DIDYGFTEAKTTYGTIGVKCWIFHGEILPVREGQQQQSQPSAGR 223
>gi|220903940|ref|YP_002479252.1| ribosomal protein S3 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|254764527|sp|B8IYH8|RS3_DESDA RecName: Full=30S ribosomal protein S3
gi|219868239|gb|ACL48574.1| ribosomal protein S3 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 213
Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats.
Identities = 112/208 (53%), Positives = 148/208 (71%), Gaps = 1/208 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG N W SRWF+ EY A ++ED KIR +++ L AG++KI IER
Sbjct: 1 MGQKVHPFGFRLGYNKNWQSRWFS-KKEYPAFVYEDSKIRAFVKKLLYHAGLSKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+I+ +ARPG++IG+KG +IEK+R L E L VNE+ +PE++A L+A++I
Sbjct: 60 GGKVRLILSTARPGIVIGRKGVEIEKLRNDLRQKFGREFSLEVNEIRRPEVDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKR V A +FG +G+KV SGRL GAE++RTE Y +GRVPLQTLRA
Sbjct: 120 AQQLERRVAFRRAMKRTVSMARKFGGEGIKVTCSGRLAGAEIARTEWYRDGRVPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
IDYG A A T YG G+KV++ + +
Sbjct: 180 DIDYGFAEARTTYGIIGVKVWIYKGEIL 207
>gi|116334263|ref|YP_795790.1| 30S ribosomal protein S3 [Lactobacillus brevis ATCC 367]
gi|122269055|sp|Q03PW3|RS3_LACBA RecName: Full=30S ribosomal protein S3
gi|116099610|gb|ABJ64759.1| SSU ribosomal protein S3P [Lactobacillus brevis ATCC 367]
Length = 219
Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats.
Identities = 91/214 (42%), Positives = 145/214 (67%), Gaps = 1/214 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+G+ W ++W+A ++ A L EDL+IR++++ L A V+ + IER
Sbjct: 1 MGQKVNPTGLRVGIIRDWEAKWYAE-KDFAAYLKEDLQIRKFIEKRLVDASVSTVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK G+++E +RK+L+++T +H+++ E+ KP+++A L+ ++I
Sbjct: 60 ANRVNISIHTAKPGMVIGKGGSEVENLRKELNDLTGKRVHINIVEIKKPDLDAKLVGENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRAM+ +Q MR GA G+K +GRLNGA++SR E Y EG VPL TLRA
Sbjct: 120 ARQLEGRVAFRRAMRGTMQRTMRSGAKGIKTQVAGRLNGADMSRVESYAEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
IDY A T YGS G+K ++ + + + +
Sbjct: 180 DIDYAWVEAHTTYGSLGVKTWIYRGEILPEKKQS 213
>gi|329117513|ref|ZP_08246230.1| ribosomal protein S3 [Streptococcus parauberis NCFD 2020]
gi|326907918|gb|EGE54832.1| ribosomal protein S3 [Streptococcus parauberis NCFD 2020]
Length = 217
Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 147/215 (68%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+G+ W+++W+A EY LHEDL IR+++Q L +A V+ I IER
Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFIQKELAEASVSTIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G +++ +R +L+ +T ++H+++ E+ P+++A L+ ++I
Sbjct: 60 INKVIVSLHTAKPGMVIGKGGANVDALRGQLNKLTGKQVHINIIEIKSPDLDAHLVGENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE+RV FRRA K+A+Q MR GA G+K SGRLNGA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLEQRVAFRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDY A+T YG G+KV++ + + +T
Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPTRKNTK 214
>gi|78211922|ref|YP_380701.1| 30S ribosomal protein S3 [Synechococcus sp. CC9605]
gi|123743385|sp|Q3AMN6|RS3_SYNSC RecName: Full=30S ribosomal protein S3
gi|78196381|gb|ABB34146.1| ribosomal protein S3 [Synechococcus sp. CC9605]
Length = 242
Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats.
Identities = 97/220 (44%), Positives = 139/220 (63%), Gaps = 3/220 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KINP RLG+ SRW+A Y ALL ED +IR+++ AG++ +LI R
Sbjct: 1 MGHKINPTGLRLGITQEHRSRWYASSKNYPALLQEDDRIRKFIHKKYGSAGISDVLIARK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117
+ + +ARPG+++G++G+ IE++R + ++ ++V EV + + +A L+A
Sbjct: 61 ADQLEVELKTARPGVLVGRQGSGIEELRSGIQKTIGDSSRQVRINVVEVERVDGDAFLLA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ IAQQLE+RV FRR ++ AVQ A R G G+K+ SGRLNGAE++RTE EGRVPL T
Sbjct: 121 EYIAQQLEKRVAFRRTIRMAVQRAQRAGVLGLKIQVSGRLNGAEIARTEWTREGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
LRA IDY T VA T YG GIKV+V + +S+ +P
Sbjct: 181 LRADIDYATKVASTTYGVLGIKVWVFKGEVLSEQAQPMPV 220
>gi|188588786|ref|YP_001919678.1| 30S ribosomal protein S3 [Clostridium botulinum E3 str. Alaska E43]
gi|251779346|ref|ZP_04822266.1| 30S ribosomal protein S3 [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|226697684|sp|B2UYB6|RS3_CLOBA RecName: Full=30S ribosomal protein S3
gi|188499067|gb|ACD52203.1| 30S ribosomal protein S3 [Clostridium botulinum E3 str. Alaska E43]
gi|243083661|gb|EES49551.1| 30S ribosomal protein S3 [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 221
Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats.
Identities = 100/219 (45%), Positives = 146/219 (66%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+GV W+++W+A ++ L ED +IR++++ L AG++KI IER
Sbjct: 1 MGQKVHPHGLRVGVIKGWDAKWYANKKDFADNLVEDNQIRKFVKKELFSAGISKIEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN-MTNSEIHLSVNEVPKPEINATLIAQS 119
K ++ +Y+A+PG++IGK G+ IE ++KKL+N ++ I +++ EV E A L+A++
Sbjct: 61 AKRVKLNIYTAKPGVVIGKGGSGIESLKKKLTNYISGKNILINIVEVKSVEAEAQLMAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA QLE+R+ FRRAMK+ +Q AMR G GVK SGRL GAE++RTE Y EG +PLQTLR
Sbjct: 121 IAAQLEKRISFRRAMKQTMQRAMRHGIKGVKTACSGRLGGAEIARTEHYHEGTIPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
A IDYG A A T YG G+KV+V + + A
Sbjct: 181 ADIDYGFAEANTTYGKIGVKVWVYKGEVLPTKKVEKEEA 219
>gi|329938226|ref|ZP_08287677.1| 30S ribosomal protein S3 [Streptomyces griseoaurantiacus M045]
gi|329302715|gb|EGG46605.1| 30S ribosomal protein S3 [Streptomyces griseoaurantiacus M045]
Length = 276
Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats.
Identities = 97/227 (42%), Positives = 152/227 (66%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FRLG+ + SRW+A Y + ED+ IR + +++AG++K+ IERT
Sbjct: 1 MGQKVNPHGFRLGITTDFKSRWYAD-KLYKDYVKEDVAIRRMMTSGMERAGISKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PE +A L+AQ++
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPETDAQLVAQAV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++++QSAM+ GA G+K+ GRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLSSRVSFRRAMRKSMQSAMKAGAKGIKIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
++DYG A+T +G G+KV++ D + ++ A R + +
Sbjct: 180 NVDYGFFEAKTTFGRIGVKVWIYKGDVKNIAEVRAENAAARAGNRPA 226
>gi|225571559|ref|ZP_03780555.1| hypothetical protein CLOHYLEM_07657 [Clostridium hylemonae DSM
15053]
gi|225159636|gb|EEG72255.1| hypothetical protein CLOHYLEM_07657 [Clostridium hylemonae DSM
15053]
Length = 218
Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats.
Identities = 98/211 (46%), Positives = 142/211 (67%), Gaps = 1/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+S+W+A E+ L ED IR YL+ L AG++ I IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAE-KEFADYLVEDHDIRTYLKKRLYSAGISDIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+II+Y+A+PG++IGK G +IEK++ +L T+ ++ + + E+ +P+ +A L+A++I
Sbjct: 60 SDRVKIIIYTAKPGVVIGKGGVEIEKVKGELKRFTDKKLVVDIKEIKRPDKDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE R+ FRRAMK + M+ GA GVK SGRL GA+++RTE Y EG +PLQTLRA
Sbjct: 120 AQQLENRISFRRAMKSCMSRTMKAGALGVKTSVSGRLGGADMARTEFYSEGTIPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYG A A T YG G+KV++ + + +
Sbjct: 180 DIDYGFAEANTTYGKVGVKVWIYKGEVLPEK 210
>gi|317507415|ref|ZP_07965149.1| ribosomal protein S3 [Segniliparus rugosus ATCC BAA-974]
gi|316254300|gb|EFV13636.1| ribosomal protein S3 [Segniliparus rugosus ATCC BAA-974]
Length = 272
Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats.
Identities = 101/212 (47%), Positives = 145/212 (68%), Gaps = 2/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRLG+ W SRWFA +Y + ED++IR+ L +++AG+AK+ IERT
Sbjct: 1 MGQKIHPHGFRLGITTDWRSRWFAD-KQYKDYIKEDIQIRKLLISGMERAGIAKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV E A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGQLEKLTGKQVQLNILEVKNSETIAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGA-DGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAMR G+KV+ GRL GAE+SR+E Y EGRVPL TLR
Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRHPQVKGIKVMCGGRLGGAEMSRSEYYREGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
A IDYG A+T +G G+KV++ D V
Sbjct: 180 ADIDYGFHEAKTTFGRIGVKVWIYKGDIVGGR 211
>gi|301057494|ref|ZP_07198590.1| ribosomal protein S3 [delta proteobacterium NaphS2]
gi|300448422|gb|EFK12091.1| ribosomal protein S3 [delta proteobacterium NaphS2]
Length = 219
Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats.
Identities = 110/215 (51%), Positives = 154/215 (71%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI FRLG+ W+SRW+A GS+Y ++ED KIRE+L+ + QAGV+KI IER
Sbjct: 1 MGQKVHPISFRLGIIRNWDSRWYA-GSQYSTFVYEDFKIREFLKKRVYQAGVSKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
RI +++ARPG++IGKKG +IEK ++ L M ++ L + EV K E++A L+A+++
Sbjct: 60 ASKVRIRMHTARPGIVIGKKGVEIEKTKRDLEKMIKRDVILDIQEVRKAEVDAQLVAENV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV FRRAMK++V SA+RFGA G+K+ +GRL GAE++R E Y EGRVPL T+RA
Sbjct: 120 ATQLERRVAFRRAMKKSVTSALRFGAQGIKIACAGRLGGAEMARREWYREGRVPLHTIRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDYG A A T YG G+KV + + + + +
Sbjct: 180 DIDYGFAQAYTTYGVIGVKVTIFKGEILPEKKQKV 214
>gi|294055214|ref|YP_003548872.1| ribosomal protein S3 [Coraliomargarita akajimensis DSM 45221]
gi|293614547|gb|ADE54702.1| ribosomal protein S3 [Coraliomargarita akajimensis DSM 45221]
Length = 210
Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats.
Identities = 95/207 (45%), Positives = 144/207 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +PI FRL V W+SRW+A ++ L ED IR +L+ L+ A V +I IER
Sbjct: 1 MGQKTHPIGFRLAVTRDWDSRWYANKQDFPGFLKEDHTIRTFLEKKLRYASVPRIFIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG+KG +++K++ +L+ ++ L + EV +P+++A L+A+++
Sbjct: 61 SGRIRVKIFTARPGVVIGRKGQELDKLKAELNKKVGKDVMLDIQEVKRPDLSAQLVAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR+ FRRAMKRAVQ+ M GA+G+++ GRL GA+++RTE G+VPLQTLRA
Sbjct: 121 ALQLERRIAFRRAMKRAVQTTMAMGAEGIRIQCGGRLGGADIARTEQQRMGKVPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207
+I YG + A T YG G+K ++ L DE
Sbjct: 181 NISYGFSEASTVYGIIGVKCWICLPDE 207
>gi|262277100|ref|ZP_06054893.1| ribosomal protein S3 [alpha proteobacterium HIMB114]
gi|262224203|gb|EEY74662.1| ribosomal protein S3 [alpha proteobacterium HIMB114]
Length = 225
Score = 254 bits (649), Expect = 7e-66, Method: Composition-based stats.
Identities = 108/205 (52%), Positives = 150/205 (73%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RL +N TW+S WFA+ YG L ED KIR+Y+ +K +GV+KILIER
Sbjct: 1 MGQKVNPIGIRLKINRTWDSVWFAKKQNYGTYLIEDFKIRKYINKTIKNSGVSKILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K C + +Y++RPG +IGKKG+DIEKI+ +S +T E+ +++ E+ KPE+++ L+A++I
Sbjct: 61 SKKCVVTIYTSRPGFVIGKKGSDIEKIKNNISKITIDEVSVNIKEIRKPELDSYLVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+RV +R+AMKRA+ SA+R GA G+KV SGRL G E++RTE EG +PL TLRA
Sbjct: 121 AQQLEKRVAYRKAMKRAMSSALRLGAKGIKVTVSGRLGGNEIARTEWLREGSIPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLR 205
+DY A A T YG G+KV++
Sbjct: 181 DVDYAEAEASTTYGIIGVKVWIYKG 205
>gi|212704589|ref|ZP_03312717.1| hypothetical protein DESPIG_02651 [Desulfovibrio piger ATCC 29098]
gi|212671988|gb|EEB32471.1| hypothetical protein DESPIG_02651 [Desulfovibrio piger ATCC 29098]
Length = 213
Score = 254 bits (648), Expect = 8e-66, Method: Composition-based stats.
Identities = 113/208 (54%), Positives = 146/208 (70%), Gaps = 1/208 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG N W SRWF+ +Y A + ED KIR Y++ L AG+AKI IER
Sbjct: 1 MGQKVHPFGFRLGYNKNWQSRWFS-KKDYPAFVFEDSKIRAYVKKLLYHAGLAKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+I+ +ARPG++IG+KG +IEK+R L E L VNE+ +PE+ A L+A++I
Sbjct: 60 GGKIRLILSTARPGIVIGRKGVEIEKLRGDLRQKFGREFSLEVNEIRRPEVEAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKR V A +FG +G+KV SGRL GAE++RTE Y +GRVPLQTLRA
Sbjct: 120 AQQLERRVAFRRAMKRTVSMARKFGGEGIKVTCSGRLAGAEIARTEWYRDGRVPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
IDYG A A T YG G+KV++ + +
Sbjct: 180 DIDYGFAEAHTTYGIIGVKVWIYKGEIL 207
>gi|256618374|ref|ZP_05475220.1| ribosomal protein S3 [Enterococcus faecalis ATCC 4200]
gi|256597901|gb|EEU17077.1| ribosomal protein S3 [Enterococcus faecalis ATCC 4200]
Length = 218
Score = 254 bits (648), Expect = 8e-66, Method: Composition-based stats.
Identities = 97/219 (44%), Positives = 148/219 (67%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+G+ W ++W+A EY LHEDL+IR+++ L A V+ I IER
Sbjct: 1 MGQKVHPIGMRVGIIRDWAAKWYAE-KEYAEFLHEDLRIRKFIATKLADAAVSTIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK G+++E +RK+L+ +T +H+++ E+ KP+++A L+ + I
Sbjct: 60 ANRVNISIHTAKPGMVIGKGGSEVENLRKELNKLTGKRVHINIVEIKKPDLDAKLVGEGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRA K+A+Q AMR GA G+K SGRLNGA+++R+E Y EG VPL TLRA
Sbjct: 120 ARQLENRVAFRRAQKQAIQRAMRAGAKGIKTQVSGRLNGADIARSEGYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDY A+T YG G+KV++ + + +T +
Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEILPTKKNTEKGGK 218
>gi|319789244|ref|YP_004150877.1| ribosomal protein S3 [Thermovibrio ammonificans HB-1]
gi|317113746|gb|ADU96236.1| ribosomal protein S3 [Thermovibrio ammonificans HB-1]
Length = 232
Score = 254 bits (648), Expect = 8e-66, Method: Composition-based stats.
Identities = 105/227 (46%), Positives = 158/227 (69%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGS-EYGALLHEDLKIREYLQCHLKQAGVAKILIER 59
MGQK++P+ FRLG+ W S+W + EY LHEDLKIR+ ++ AG+A+I IER
Sbjct: 1 MGQKVHPVGFRLGITKDWESKWVTKKKGEYVHNLHEDLKIRDLIKKKYYHAGIARIDIER 60
Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
T + I +++ARPGL+I +KG +++ +R+ L +T +++++ EV P++NA L+A++
Sbjct: 61 TPERINIRIWAARPGLLIARKGAEVKALRRFLEELTGKNVYINIEEVKYPQLNAQLVAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
+AQQLERRV FRRAMKR + AM+ GA G+KV+ +GRL GA+++R E Y EGRVPLQT+R
Sbjct: 121 VAQQLERRVAFRRAMKRVIADAMKAGAKGIKVMCAGRLGGADMARKEWYREGRVPLQTIR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
A IDYGTA+A+T YG G+KV++ D D + + V+++
Sbjct: 181 ADIDYGTAIAKTKYGVIGVKVWIYKGDVYKDETEELLKKIEKEVKQE 227
>gi|289641160|ref|ZP_06473328.1| ribosomal protein S3 [Frankia symbiont of Datisca glomerata]
gi|289509101|gb|EFD30032.1| ribosomal protein S3 [Frankia symbiont of Datisca glomerata]
Length = 335
Score = 254 bits (648), Expect = 8e-66, Method: Composition-based stats.
Identities = 100/218 (45%), Positives = 150/218 (68%), Gaps = 1/218 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FRLG+ + SRW+A +Y A + ED+KIR+ + +++AG++++ IERT
Sbjct: 1 MGQKVNPHGFRLGITSEFTSRWYAD-KQYKAYVGEDVKIRKMMSRGMERAGISRVDIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PE++A L+AQ +
Sbjct: 60 QGRLRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPEVDAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++A+QSAM+ GA G++V SGRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLSSRVSFRRAMRKAMQSAMKGGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
+IDYG A T +G G+KV++ D V
Sbjct: 180 NIDYGFYEARTTFGRIGVKVWIYKGDVVQSRAEREAQE 217
>gi|167771261|ref|ZP_02443314.1| hypothetical protein ANACOL_02619 [Anaerotruncus colihominis DSM
17241]
gi|167666512|gb|EDS10642.1| hypothetical protein ANACOL_02619 [Anaerotruncus colihominis DSM
17241]
Length = 229
Score = 254 bits (648), Expect = 8e-66, Method: Composition-based stats.
Identities = 107/229 (46%), Positives = 152/229 (66%), Gaps = 8/229 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+SRWFA+ +G +L ED K+R++L+ L AG+ KI IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWFAKDDAFGDILVEDYKLRKFLKKTLYDAGIPKIEIERD 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS--------EIHLSVNEVPKPEIN 112
RI V+ +RPG++IGK G +IEK+R++ M N ++ ++V E+ +P+ N
Sbjct: 61 ATRVRIHVHCSRPGIVIGKGGAEIEKVRRQCDAMINKGKADADKRQVFINVVEIKQPDKN 120
Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172
A L+A+SIA QLE RV FRRAMK+A+ AM+FGA G+KV SGRL GAE++R+E Y EG
Sbjct: 121 AQLVAESIASQLEARVSFRRAMKQAIGRAMKFGAKGIKVAVSGRLGGAEIARSEHYHEGT 180
Query: 173 VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
+PLQT+RA IDYG A A T YG G+KV++ + + D+ ++
Sbjct: 181 IPLQTIRADIDYGFAEANTTYGRIGVKVWIYAGEVLGDAKRPRREGGNK 229
>gi|255526584|ref|ZP_05393491.1| ribosomal protein S3 [Clostridium carboxidivorans P7]
gi|296187272|ref|ZP_06855668.1| ribosomal protein S3 [Clostridium carboxidivorans P7]
gi|255509692|gb|EET86025.1| ribosomal protein S3 [Clostridium carboxidivorans P7]
gi|296048143|gb|EFG87581.1| ribosomal protein S3 [Clostridium carboxidivorans P7]
Length = 223
Score = 254 bits (648), Expect = 8e-66, Method: Composition-based stats.
Identities = 97/220 (44%), Positives = 142/220 (64%), Gaps = 1/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+GV W+++W+A + L ED KIRE+++ AGV+KI IER
Sbjct: 1 MGQKVHPHGLRVGVIKDWDAKWYANKKNFADNLVEDNKIREFVKAKTAAAGVSKIQIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT-NSEIHLSVNEVPKPEINATLIAQS 119
K ++ +++A+PG++IGK G+ I ++ L + + I +++ EV E +A L+A+S
Sbjct: 61 AKRVKLNIFTAKPGMVIGKGGSGINALKASLQKIITDKNILINIVEVKSAEGDAQLMAES 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
+AQQLE+R+ FRRAMK+ +Q AM+ G GVK SGRL GAE++RTE Y EG +PLQTLR
Sbjct: 121 VAQQLEKRISFRRAMKQTIQRAMKTGVKGVKTSCSGRLGGAEIARTEQYHEGTIPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
A IDYG A A+T YG G+KV+V + + E
Sbjct: 181 ADIDYGFAEADTTYGKIGVKVWVYRGEILPVKKVAQNQEE 220
>gi|29831475|ref|NP_826109.1| 30S ribosomal protein S3 [Streptomyces avermitilis MA-4680]
gi|61215744|sp|Q82DN9|RS3_STRAW RecName: Full=30S ribosomal protein S3
gi|29608590|dbj|BAC72644.1| putative ribosomal protein S3 [Streptomyces avermitilis MA-4680]
Length = 275
Score = 254 bits (648), Expect = 8e-66, Method: Composition-based stats.
Identities = 97/227 (42%), Positives = 152/227 (66%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FRLG+ + SRW+A Y + ED+ IR + +++AG++K+ IERT
Sbjct: 1 MGQKVNPHGFRLGITTDFKSRWYAD-KLYKDYVKEDVAIRRMMTSGMERAGISKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PE +A L+AQ++
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPETDAQLVAQAV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++++QSAM+ GA G+K+ GRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLSSRVSFRRAMRKSMQSAMKAGAKGIKIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
++DYG A+T +G G+KV++ D + ++ A R + +
Sbjct: 180 NVDYGFFEAKTTFGRIGVKVWIYKGDVKNIAEVRAENAAARAGNRPA 226
>gi|225027484|ref|ZP_03716676.1| hypothetical protein EUBHAL_01740 [Eubacterium hallii DSM 3353]
gi|224955219|gb|EEG36428.1| hypothetical protein EUBHAL_01740 [Eubacterium hallii DSM 3353]
Length = 220
Score = 254 bits (648), Expect = 9e-66, Method: Composition-based stats.
Identities = 95/214 (44%), Positives = 146/214 (68%), Gaps = 3/214 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+G+ W+SRW+A ++ L ED KIR+Y++ L AG+++ IER
Sbjct: 1 MGQKVNPHGLRVGIIKDWDSRWYAE-KDFADNLVEDDKIRKYIKNRLYSAGISRTEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPK--PEINATLIAQ 118
+II+++A+PG++IG+ G+ I++++K+L +T ++ + + EV + + +A L+A+
Sbjct: 60 SDRVKIIIHTAKPGIVIGRGGSAIDELKKELEKLTGKKLIIEIKEVKRFDVDKDAQLVAE 119
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
+IAQQLE R+ FRRAMK +Q MR GA G+K SGRL GA+++RTE Y EG +PLQTL
Sbjct: 120 NIAQQLENRISFRRAMKSCMQRTMRNGALGIKTSCSGRLGGADMARTEFYSEGTIPLQTL 179
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
RA+IDYG A A T YG G+KV+V + + +
Sbjct: 180 RANIDYGFAEANTTYGKVGVKVWVYHGEVLPTKE 213
>gi|157737009|ref|YP_001489692.1| 30S ribosomal protein S3 [Arcobacter butzleri RM4018]
gi|315636201|ref|ZP_07891455.1| 30S ribosomal protein S3 [Arcobacter butzleri JV22]
gi|189044982|sp|A8ESU9|RS3_ARCB4 RecName: Full=30S ribosomal protein S3
gi|157698863|gb|ABV67023.1| 30S ribosomal protein S3 [Arcobacter butzleri RM4018]
gi|315479562|gb|EFU70241.1| 30S ribosomal protein S3 [Arcobacter butzleri JV22]
Length = 234
Score = 254 bits (648), Expect = 9e-66, Method: Composition-based stats.
Identities = 118/225 (52%), Positives = 156/225 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N W SRWF + A + ED KIR+Y++ L AG+A+ ++ERT
Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPKFETMPANVAEDDKIRKYVKKELYYAGIAQTVVERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ V +ARPG+IIGKKG D+EK++ LS + EI +++ E KP+I+A L A+++
Sbjct: 61 AKKVRVTVVAARPGIIIGKKGADVEKLKDALSKLVGKEIAVNIKEERKPQISAQLSAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKR +Q+A++ GA G+KV SGRL GAE++RTE YLEGRVPL TLRA
Sbjct: 121 AQQLERRVAFRRAMKRVMQNALKGGAKGIKVSVSGRLGGAEMARTEWYLEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDYG A A T YG GIKV++ + ++ T A E K
Sbjct: 181 RIDYGFAEAHTTYGCIGIKVWIFKGEVLAKGIPTEKAEETTSKPK 225
>gi|14278532|pdb|1I94|C Chain C, Crystal Structures Of The Small Ribosomal Subunit With
Tetracycline, Edeine And If3
gi|14278553|pdb|1I95|C Chain C, Crystal Structure Of The 30s Ribosomal Subunit From
Thermus Thermophilus In Complex With Edeine
gi|14278574|pdb|1I96|C Chain C, Crystal Structure Of The 30s Ribosomal Subunit From
Thermus Thermophilus In Complex With The Translation
Initiation Factor If3 (C-Terminal Domain)
gi|14278596|pdb|1I97|C Chain C, Crystal Structure Of The 30s Ribosomal Subunit From
Thermus Thermophilus In Complex With Tetracycline
gi|149241277|pdb|2E5L|C Chain C, A Snapshot Of The 30s Ribosomal Subunit Capturing Mrna Via
The Shine- Dalgarno Interaction
gi|226887631|pdb|2ZM6|C Chain C, Crystal Structure Of The Thermus Thermophilus 30s
Ribosomal Subunit
Length = 238
Score = 254 bits (648), Expect = 9e-66, Method: Composition-based stats.
Identities = 100/214 (46%), Positives = 139/214 (64%)
Query: 2 GQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTH 61
G KI+PI FRLG+ W SRW+A +Y LL ED +IR L+ L AG+A++ IER
Sbjct: 1 GNKIHPIGFRLGITRDWESRWYAGKKQYRHLLLEDQRIRGLLEKELYSAGLARVDIERAA 60
Query: 62 KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIA 121
N + V+ A+PG++IG+ G I +R++L+ +T + L+V EV P ++A L+AQ +A
Sbjct: 61 DNVAVTVHVAKPGVVIGRGGERIRVLREELAKLTGKNVALNVQEVQNPNLSAPLVAQRVA 120
Query: 122 QQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH 181
+Q+ERR RRA+K+AVQ M GA G KVI SGR+ GAE +RTE +GRVPL TLRA+
Sbjct: 121 EQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSGRIGGAEQARTEWAAQGRVPLHTLRAN 180
Query: 182 IDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDYG A+A T YG G+K Y+ L + +
Sbjct: 181 IDYGFALARTTYGVLGVKAYIFLGEVIGGQKPKA 214
>gi|260435557|ref|ZP_05789527.1| ribosomal protein S3 [Synechococcus sp. WH 8109]
gi|260413431|gb|EEX06727.1| ribosomal protein S3 [Synechococcus sp. WH 8109]
Length = 242
Score = 254 bits (648), Expect = 9e-66, Method: Composition-based stats.
Identities = 97/220 (44%), Positives = 138/220 (62%), Gaps = 3/220 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KINP RLG+ SRW+A Y ALL ED +IR+++ AG++ +LI R
Sbjct: 1 MGHKINPTGLRLGITQEHRSRWYASSKNYPALLQEDDRIRKFIHKKYGSAGISDVLIARK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117
+ + +ARPG+++G++G+ IE +R + ++ ++V EV + + +A L+A
Sbjct: 61 ADQLEVELKTARPGVLVGRQGSGIEDLRSGIQKTIGDSSRQVRINVVEVERVDGDAFLLA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ IAQQLE+RV FRR ++ AVQ A R G G+K+ SGRLNGAE++RTE EGRVPL T
Sbjct: 121 EYIAQQLEKRVAFRRTIRMAVQRAQRAGVLGLKIQVSGRLNGAEIARTEWTREGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
LRA IDY T VA T YG GIKV+V + +S+ +P
Sbjct: 181 LRADIDYATKVASTTYGVLGIKVWVFKGEVLSEQAQPMPV 220
>gi|224437289|ref|ZP_03658261.1| 30S ribosomal protein S3 [Helicobacter cinaedi CCUG 18818]
gi|313143744|ref|ZP_07805937.1| 30S ribosomal protein S3 [Helicobacter cinaedi CCUG 18818]
gi|313128775|gb|EFR46392.1| 30S ribosomal protein S3 [Helicobacter cinaedi CCUG 18818]
Length = 235
Score = 254 bits (648), Expect = 9e-66, Method: Composition-based stats.
Identities = 109/226 (48%), Positives = 154/226 (68%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N W+SRWF+ + + ED KIR++L+ + AGV++I+IER
Sbjct: 1 MGQKVNPIGLRLGINRNWSSRWFSVSQATPSNILEDHKIRKFLKREMYYAGVSEIIIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ V ++RPGLIIGKKG DI+K ++ L + N E+ +++ E +P+ NA L A++I
Sbjct: 61 ANKIRVTVVASRPGLIIGKKGVDIDKHKEALKKILNKEVFINIKEAKRPQANAQLAAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV FRRAMK+ +Q+AM+ GA G+KV SGRL GAE++RTE Y+EGRVPL TLRA
Sbjct: 121 ATQLEKRVAFRRAMKKVMQAAMKAGAKGIKVKVSGRLAGAEMARTEWYMEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDYG A A T YG G+KV++ + + E + +K+
Sbjct: 181 KIDYGFAEAMTTYGIIGVKVWIFKGEVLHKGIMPEKREESKGGDKE 226
>gi|270157904|ref|ZP_06186561.1| ribosomal protein S3 [Legionella longbeachae D-4968]
gi|289163836|ref|YP_003453974.1| 30S ribosomal protein S3 [Legionella longbeachae NSW150]
gi|269989929|gb|EEZ96183.1| ribosomal protein S3 [Legionella longbeachae D-4968]
gi|288857009|emb|CBJ10823.1| 30S ribosomal protein S3 [Legionella longbeachae NSW150]
Length = 218
Score = 254 bits (648), Expect = 9e-66, Method: Composition-based stats.
Identities = 111/219 (50%), Positives = 154/219 (70%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ WNS+WFA Y L +D+K+R L+ L A V+KILIER
Sbjct: 1 MGQKVNPIGIRLGIIKDWNSKWFAGKK-YAEFLIQDIKLRTELKKKLMAAAVSKILIERP 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
N + + +ARPG+IIGKKG IE +R ++S+ +HL++ E+ KPE++ATL+A+SI
Sbjct: 60 ANNAVVTILTARPGIIIGKKGGGIEALRAEISSKLGVPVHLNIEEIKKPELDATLVAESI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+RV+FRRAMKRAV A++ GA G+K+ SGRL GAE++R+E Y EGRVPL T RA
Sbjct: 120 AQQLEQRVMFRRAMKRAVTGALKAGAKGIKICVSGRLGGAEIARSEWYREGRVPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDYGTA ++T YG G+KV++ + + + +A+
Sbjct: 180 DIDYGTAESKTTYGIIGVKVWIYKGEVLPQKKRSTDSAQ 218
>gi|227505210|ref|ZP_03935259.1| 30S ribosomal protein S3 [Corynebacterium striatum ATCC 6940]
gi|227198184|gb|EEI78232.1| 30S ribosomal protein S3 [Corynebacterium striatum ATCC 6940]
Length = 248
Score = 254 bits (648), Expect = 9e-66, Method: Composition-based stats.
Identities = 104/215 (48%), Positives = 151/215 (70%), Gaps = 2/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P RLG+ W + WFA +Y + ED+KIR++L+ L +AG+A ++IERT
Sbjct: 1 MGQKIHPHGLRLGITSDWKTHWFAD-KDYANYVAEDIKIRQFLEKGLDRAGIADVVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR++L +T + L++ EV + + NATL+AQS+
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRRELEKLTGKMVALNILEVKQVDANATLVAQSV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAM + G+K++ SGRL GAE+SRTE Y EGRVPL TLR
Sbjct: 120 AEQLVNRVAFRRAMRKAIQSAMRQPQVKGIKILLSGRLGGAEMSRTERYHEGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
A IDYGTA A T +G GIKV++ D V +
Sbjct: 180 AEIDYGTAEAHTTFGRIGIKVWIYKGDVVGGVRES 214
>gi|239905864|ref|YP_002952603.1| 30S ribosomal protein S3 [Desulfovibrio magneticus RS-1]
gi|259495243|sp|C4XLX9|RS3_DESMR RecName: Full=30S ribosomal protein S3
gi|239795728|dbj|BAH74717.1| 30S ribosomal protein S3 [Desulfovibrio magneticus RS-1]
Length = 213
Score = 254 bits (648), Expect = 9e-66, Method: Composition-based stats.
Identities = 110/215 (51%), Positives = 155/215 (72%), Gaps = 2/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG N W SRWF+ +Y + ED KIR++++ L AG++KI IER
Sbjct: 1 MGQKVHPYGFRLGYNKNWLSRWFS-KKDYPEFVFEDNKIRKFVKKSLYHAGISKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+I+++ARPG++IG+KGT+IEK+R L + E + VNE+ +PEI+A L+A++I
Sbjct: 60 GGKIRLIIHTARPGIVIGRKGTEIEKVRGDLKQRFSREFTVEVNEIRRPEIDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV FRRAMKR V + +FGA+G+KV +GRL GAE++R+E Y +GRVPLQTLRA
Sbjct: 120 ALQLERRVAFRRAMKRTVGLSRKFGAEGIKVSCAGRLAGAEIARSEWYRDGRVPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDYG A+A+T YG G+KV++ + E+ D +
Sbjct: 180 DIDYGYAIAKTTYGVIGVKVWIF-KGEILDHEVEA 213
>gi|163791672|ref|ZP_02186067.1| 30S ribosomal protein S3 [Carnobacterium sp. AT7]
gi|159873051|gb|EDP67160.1| 30S ribosomal protein S3 [Carnobacterium sp. AT7]
Length = 218
Score = 254 bits (648), Expect = 9e-66, Method: Composition-based stats.
Identities = 95/219 (43%), Positives = 147/219 (67%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP R+G+ W+S+W+A ++ LHED+ IREY+ L A V+K+ IER
Sbjct: 1 MGQKINPTGLRVGIIRDWDSKWYAE-KDFANYLHEDIAIREYIAKKLSDASVSKVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ V++A+PG++IGK G++++ +RKKL+++T +H+++ E+ +P+++A L+ + I
Sbjct: 60 ANRVNVSVHTAKPGMVIGKGGSEVDALRKKLNDLTGKRVHINIVEIKRPDLDAKLVGEGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRA K+A+Q MR GA G+K + SGRLNGA+++R+E + EG VPL TLRA
Sbjct: 120 ARQLESRVAFRRAQKQAIQRTMRAGAKGIKTMVSGRLNGADIARSETHSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDY A T YG GIKV++ + + + +
Sbjct: 180 DIDYAWEEAATTYGKLGIKVWIYRGEVLPTKKNIEKGGK 218
>gi|315605905|ref|ZP_07880936.1| 30S ribosomal protein S3 [Actinomyces sp. oral taxon 180 str.
F0310]
gi|315312187|gb|EFU60273.1| 30S ribosomal protein S3 [Actinomyces sp. oral taxon 180 str.
F0310]
Length = 269
Score = 254 bits (648), Expect = 9e-66, Method: Composition-based stats.
Identities = 102/226 (45%), Positives = 153/226 (67%), Gaps = 5/226 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQK+NP FRLG+ SRWF+ G Y + ED+ IR++L +L++AG+A++
Sbjct: 1 MGQKVNPRGFRLGITTDHRSRWFSDSTTKGQRYADYVAEDVAIRKFLTDNLERAGIAEVS 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + +++R +L +T ++ L++ EV P++ A L+
Sbjct: 61 IERTRDRVRVDLHTARPGIVIGRRGAEADRLRVQLEKLTGKQVQLNILEVKNPDLEAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ IA+QL RV FRRAM++ +QSA R GA G++V SGRL GAE+SR+E Y EGRVPL
Sbjct: 121 AQGIAEQLAARVSFRRAMRKGIQSAQRAGAKGIRVQVSGRLGGAEMSRSEFYREGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
TLRA+IDYG A T +G G+KV++ D +++ + AEH
Sbjct: 181 TLRANIDYGFHEARTTFGRIGVKVWIYKGD-LTEREFARQQAEHAQ 225
>gi|309389927|gb|ADO77807.1| SSU ribosomal protein S3P [Halanaerobium praevalens DSM 2228]
Length = 214
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 98/214 (45%), Positives = 148/214 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KINP R+GV W+++W+A +Y LL+ED +IR +++ + +AG++K++IER
Sbjct: 1 MGNKINPHGLRVGVIKDWDAKWYADKKDYSKLLNEDREIRSHVKEKMFEAGISKVVIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ VY+ARPG++IG+ G+++E +R + +T + ++V EV PE NA L+A++I
Sbjct: 61 ANRLKLDVYTARPGMVIGRGGSEVEALRNDVEALTGKTVQINVVEVKDPEKNAQLVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL RRV FRRAMK+A+ AMR G +G KV +SGRL GAE++R E Y EG VP+ TLRA
Sbjct: 121 ASQLVRRVSFRRAMKQAMNRAMRMGVEGFKVQSSGRLGGAEMARREGYSEGSVPMHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
IDYG A A T YG+ G+KV+++ + + + D
Sbjct: 181 DIDYGFAEAATTYGTIGVKVWINKGEILPEIDDE 214
>gi|325294402|ref|YP_004280916.1| ribosomal protein S3 [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325064850|gb|ADY72857.1| ribosomal protein S3 [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 232
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 107/227 (47%), Positives = 157/227 (69%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGS-EYGALLHEDLKIREYLQCHLKQAGVAKILIER 59
MGQK++PI FRLG+ W ++W + +Y LHEDLKIR+ ++ AG+A+I IER
Sbjct: 1 MGQKVHPIGFRLGITKDWEAKWVVKEKGKYVKFLHEDLKIRDLIKKKYYHAGIARIDIER 60
Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
T I +++ARPGL+I +KG +++ +RK L +T +++++ EV P++NA L+A++
Sbjct: 61 TLDRINIRIWAARPGLLIARKGAEVKALRKYLEELTGKSVYINIEEVKYPQLNAQLVAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
+AQQLERRV FRRAMKR + AM+ GA G+KV +GRL GA+++RTE Y EGRVPLQT+R
Sbjct: 121 VAQQLERRVAFRRAMKRVIADAMKAGAKGIKVQCAGRLGGADMARTEWYREGRVPLQTIR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
A IDYGTA+A+T YG G+KV++ D D I + V+++
Sbjct: 181 ADIDYGTAIAKTKYGVIGVKVWIYKGDVYKDETEEILKKIEKEVKQE 227
>gi|294630899|ref|ZP_06709459.1| ribosomal protein S3 [Streptomyces sp. e14]
gi|292834232|gb|EFF92581.1| ribosomal protein S3 [Streptomyces sp. e14]
Length = 276
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 98/227 (43%), Positives = 152/227 (66%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FRLGV + SRW+A Y + ED+ IR + +++AG++K+ IERT
Sbjct: 1 MGQKVNPHGFRLGVTTDFKSRWYAD-KLYKDYVKEDVAIRRMMTSGMERAGISKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PE +A L+AQ++
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPETDAQLVAQAV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++++QSAM+ GA G+K+ GRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLSSRVSFRRAMRKSMQSAMKAGAKGIKIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
++DYG A+T +G G+KV++ D + ++ A R + +
Sbjct: 180 NVDYGFFEAKTTFGRIGVKVWIYKGDVKNIAEVRAENAAARAGNRPA 226
>gi|255282611|ref|ZP_05347166.1| ribosomal protein S3 [Bryantella formatexigens DSM 14469]
gi|255266904|gb|EET60109.1| ribosomal protein S3 [Bryantella formatexigens DSM 14469]
Length = 214
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 99/211 (46%), Positives = 145/211 (68%), Gaps = 1/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+S+W+A E+ L ED KIR YL+ L AGV++I IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAES-EFADYLVEDNKIRTYLKKKLYSAGVSRIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++I+Y+A+PG++IGK G++IEK++ ++ +T ++ + + EV +P+ +A L+A++I
Sbjct: 60 SGRVKVIIYTAKPGVVIGKGGSEIEKVKAEVQKLTKEKLLVDIKEVKRPDRDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE RV FRRAMK + M+ GA G+K SGRL GA+++RTE Y EG +PLQTLRA
Sbjct: 120 AQQLENRVSFRRAMKSTMGRTMKTGAKGIKAAVSGRLGGADIARTEFYSEGTIPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYG A A+T YG G+KV++ + +
Sbjct: 180 DIDYGFAEADTTYGKLGVKVWIYNGEILPTK 210
>gi|150392154|ref|YP_001322203.1| ribosomal protein S3 [Alkaliphilus metalliredigens QYMF]
gi|189044985|sp|A6TWH6|RS3_ALKMQ RecName: Full=30S ribosomal protein S3
gi|149952016|gb|ABR50544.1| ribosomal protein S3 [Alkaliphilus metalliredigens QYMF]
Length = 234
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 100/225 (44%), Positives = 145/225 (64%), Gaps = 1/225 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+++W+A ++ L ED IR++++ L +G+ KI ER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDAKWYANKRDFSDYLIEDHSIRKFVKKKLFLSGINKIETERA 60
Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
N +I V++A+PG++IGK G +E++RK+L MT + ++V EV +PE+ + L+A++
Sbjct: 61 ANNRVKINVHTAKPGMVIGKGGIGVEELRKELEKMTKKTVIVNVVEVKRPEVESQLVAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA LERRV FRRAMK+A+Q AMR GA G+KV +GRL GA+++RTE Y EG VPL TLR
Sbjct: 121 IAFSLERRVSFRRAMKQAMQRAMRAGAKGIKVSTAGRLGGADMARTEGYSEGNVPLHTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
A IDYG A A+T YG GIKV++ + +
Sbjct: 181 ADIDYGFAEADTTYGKLGIKVWIYKGEILPTKGKNEETNNETADN 225
>gi|302558988|ref|ZP_07311330.1| ribosomal protein S3 [Streptomyces griseoflavus Tu4000]
gi|302476606|gb|EFL39699.1| ribosomal protein S3 [Streptomyces griseoflavus Tu4000]
Length = 275
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 98/227 (43%), Positives = 152/227 (66%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FRLGV + SRW+A Y + ED+ IR + +++AG++K+ IERT
Sbjct: 1 MGQKVNPHGFRLGVTTDFKSRWYAD-KLYKDYVKEDVAIRRMMTSGMERAGISKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PE +A L+AQ++
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPETDAQLVAQAV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++++QSAM+ GA G+K+ GRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLSSRVSFRRAMRKSMQSAMKAGAKGIKIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
++DYG A+T +G G+KV++ D + ++ A R + +
Sbjct: 180 NVDYGFFEAKTTFGRIGVKVWIYKGDVKNIAEVRAENAAARAGNRPA 226
>gi|261364861|ref|ZP_05977744.1| ribosomal protein S3 [Neisseria mucosa ATCC 25996]
gi|288566910|gb|EFC88470.1| ribosomal protein S3 [Neisseria mucosa ATCC 25996]
Length = 231
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 112/224 (50%), Positives = 159/224 (70%), Gaps = 2/224 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRL V W S+WFA+ +++ A+L +D+ +R YL+ L A V +++IER
Sbjct: 1 MGQKINPTGFRLAVTKDWASKWFAKSTDFSAVLKQDIDVRNYLRKKLANASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ RI ++SARPG++IGKKG DIE +++ L + +H+++ E+ KPE++A +IA I
Sbjct: 61 AKSARITIHSARPGVVIGKKGEDIEVLKRDLQALMGVPVHVNIEEIRKPELDAQIIADGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+RV FRRAMKRA+Q+AMR GA G+K++ SGRLNGA+++R+E Y EGRVPL TLRA
Sbjct: 121 AQQLEKRVQFRRAMKRAMQNAMRSGAKGIKIMTSGRLNGADIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
++DY T+ A T YG G+KV+V V S P E + +
Sbjct: 181 NVDYATSEAHTTYGVLGLKVWVYTEGSV--KTSAKPEHEKKQRK 222
>gi|213964938|ref|ZP_03393137.1| ribosomal protein S3 [Corynebacterium amycolatum SK46]
gi|213952474|gb|EEB63857.1| ribosomal protein S3 [Corynebacterium amycolatum SK46]
Length = 246
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 102/228 (44%), Positives = 153/228 (67%), Gaps = 2/228 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P RLG++ W SRW+A +Y L ED+KIR+ L L++AG++ ++IERT
Sbjct: 1 MGQKIHPHGLRLGISSDWKSRWYAD-KQYADYLAEDIKIRDLLSTGLERAGISDVVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G++ ++IR +L +T ++ L++ EV + +A L+AQSI
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGSEADRIRGQLEKLTGKQVQLNILEVKNIDADAKLVAQSI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAM + G+KV+ SGRL GAE+ RTE Y EGRVPL TLR
Sbjct: 120 AEQLANRVAFRRAMRKAIQSAMRQPHVKGIKVVCSGRLGGAEMGRTERYHEGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
A IDYGT A T +G G+KV++ D + + A + + +
Sbjct: 180 AEIDYGTHEAHTTFGRIGVKVWIYKGDVIGGRRESEINAGNARQRRGN 227
>gi|329945690|ref|ZP_08293420.1| ribosomal protein S3 [Actinomyces sp. oral taxon 170 str. F0386]
gi|328528498|gb|EGF55472.1| ribosomal protein S3 [Actinomyces sp. oral taxon 170 str. F0386]
Length = 222
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 103/223 (46%), Positives = 154/223 (69%), Gaps = 5/223 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQK+NP FRLG+ SRWFA G Y + ED+KIR ++ +++AG++K+
Sbjct: 1 MGQKVNPTGFRLGITTDHRSRWFADSTKPGQRYRDFVEEDVKIRRLMEDGMERAGISKVD 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + E++R +L +T ++ L++ EV P+++A L+
Sbjct: 61 IERTRDRVRVDLHTARPGIVIGRRGAEAERLRGQLEKLTGKQVQLNILEVKSPDLDAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ IA+QL RV FRRAM++ +QSAMR GA G++V SGRL GAE+SR+E Y EGRVPL
Sbjct: 121 AQGIAEQLASRVSFRRAMRKGMQSAMRAGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
TLRA+IDYG A+T +G G+KV++ D +++ + AE
Sbjct: 181 TLRANIDYGFYEAKTTFGRLGVKVWIYKGD-ITEREFARQQAE 222
>gi|317153952|ref|YP_004122000.1| 30S ribosomal protein S3 [Desulfovibrio aespoeensis Aspo-2]
gi|316944203|gb|ADU63254.1| ribosomal protein S3 [Desulfovibrio aespoeensis Aspo-2]
Length = 213
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 106/208 (50%), Positives = 151/208 (72%), Gaps = 1/208 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG N W SRW++ +Y A + +D +IR++++ L QAG+A++ IER
Sbjct: 1 MGQKVHPYGFRLGYNKNWLSRWYS-KKDYPAFVLQDDQIRKFVKKKLFQAGIARLEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+I+++ARPG++IG+KG +IEK+R +L N +E + VNE+ +PE+ A L+A+SI
Sbjct: 60 GGKIRLIIHTARPGIVIGRKGVEIEKLRDELRNKYQTEFTIEVNEIRRPEVEAQLVAESI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERR+ FRRAMKR V A +FGA+G+KV +GRL GAE++R E Y +GRVPL TLRA
Sbjct: 120 AQQLERRIAFRRAMKRTVGLARKFGAEGIKVACAGRLAGAEIARGEWYRDGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
IDYG A A T YG G+KV++ + +
Sbjct: 180 DIDYGFAEAHTTYGVIGVKVWIFKGEIL 207
>gi|154483181|ref|ZP_02025629.1| hypothetical protein EUBVEN_00882 [Eubacterium ventriosum ATCC
27560]
gi|149735989|gb|EDM51875.1| hypothetical protein EUBVEN_00882 [Eubacterium ventriosum ATCC
27560]
Length = 215
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 99/212 (46%), Positives = 145/212 (68%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+S+W+A +++ L ED +IR YL+ L GV+KI IER+
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAE-ADFADNLIEDYEIRTYLKKKLYSTGVSKIEIERS 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ VY+A+PGL+IGK G +IEK++ ++ MT+ ++ + V +V +P+ +A L+A++I
Sbjct: 60 SDRVRVNVYTAKPGLVIGKGGAEIEKVKAEVQKMTDKKLFMDVKDVKRPDKDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE RV FRRAMK + M+ GA G+K SGRL GA+++RTE Y EG +PLQTLRA
Sbjct: 120 AAQLENRVSFRRAMKSCMSRTMKTGALGIKTSVSGRLGGADMARTEFYSEGTIPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
IDYG A A+T YG G+KV++ + + +
Sbjct: 180 DIDYGFAEADTTYGKVGVKVWIYNGEILPTRE 211
>gi|239929508|ref|ZP_04686461.1| 30S ribosomal protein S3 [Streptomyces ghanaensis ATCC 14672]
gi|291437833|ref|ZP_06577223.1| 30S ribosomal protein S3 [Streptomyces ghanaensis ATCC 14672]
gi|291340728|gb|EFE67684.1| 30S ribosomal protein S3 [Streptomyces ghanaensis ATCC 14672]
Length = 274
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 98/227 (43%), Positives = 152/227 (66%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FRLGV + SRW+A Y + ED+ IR + +++AG++K+ IERT
Sbjct: 1 MGQKVNPHGFRLGVTTDFKSRWYAD-KLYKDYVKEDVAIRRMMTSGMERAGISKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PE +A L+AQ++
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPETDAQLVAQAV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++++QSAM+ GA G+K+ GRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLSSRVSFRRAMRKSMQSAMKAGAKGIKIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
++DYG A+T +G G+KV++ D + ++ A R + +
Sbjct: 180 NVDYGFFEAKTTFGRIGVKVWIYKGDVKNIAEVRAENAAARAGNRPA 226
>gi|59802154|ref|YP_208866.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae FA 1090]
gi|194099929|ref|YP_002003067.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae NCCP11945]
gi|239997932|ref|ZP_04717856.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae 35/02]
gi|240015090|ref|ZP_04722003.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae DGI18]
gi|240017539|ref|ZP_04724079.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae FA6140]
gi|240081682|ref|ZP_04726225.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae FA19]
gi|240113960|ref|ZP_04728450.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae MS11]
gi|240116694|ref|ZP_04730756.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae PID18]
gi|240118916|ref|ZP_04732978.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae PID1]
gi|240122162|ref|ZP_04735124.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae PID24-1]
gi|240124454|ref|ZP_04737410.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae PID332]
gi|240124677|ref|ZP_04737563.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae SK-92-679]
gi|240129130|ref|ZP_04741791.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae SK-93-1035]
gi|254494715|ref|ZP_05107886.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae 1291]
gi|260439547|ref|ZP_05793363.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae DGI2]
gi|268593782|ref|ZP_06127949.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae 35/02]
gi|268597779|ref|ZP_06131946.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae FA19]
gi|268600024|ref|ZP_06134191.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae MS11]
gi|268602362|ref|ZP_06136529.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae PID18]
gi|268604625|ref|ZP_06138792.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae PID1]
gi|268683083|ref|ZP_06149945.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae PID332]
gi|268683251|ref|ZP_06150113.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae SK-92-679]
gi|268687513|ref|ZP_06154375.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae SK-93-1035]
gi|291042783|ref|ZP_06568524.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae DGI2]
gi|293398196|ref|ZP_06642401.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae F62]
gi|75507299|sp|Q5F5T3|RS3_NEIG1 RecName: Full=30S ribosomal protein S3
gi|226697736|sp|B4RQY4|RS3_NEIG2 RecName: Full=30S ribosomal protein S3
gi|59719049|gb|AAW90454.1| putative 30S ribosomal subunit protein S3 [Neisseria gonorrhoeae FA
1090]
gi|193935219|gb|ACF31043.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae NCCP11945]
gi|226513755|gb|EEH63100.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae 1291]
gi|268547171|gb|EEZ42589.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae 35/02]
gi|268551567|gb|EEZ46586.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae FA19]
gi|268584155|gb|EEZ48831.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae MS11]
gi|268586493|gb|EEZ51169.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae PID18]
gi|268588756|gb|EEZ53432.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae PID1]
gi|268623367|gb|EEZ55767.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae PID332]
gi|268623535|gb|EEZ55935.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae SK-92-679]
gi|268627797|gb|EEZ60197.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae SK-93-1035]
gi|291013217|gb|EFE05183.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae DGI2]
gi|291611459|gb|EFF40529.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae F62]
gi|317165382|gb|ADV08923.1| 30S ribosomal protein S3 [Neisseria gonorrhoeae TCDC-NG08107]
Length = 230
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 108/227 (47%), Positives = 160/227 (70%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRL V W S+WFA+ +++ +L +D+ +R YL+ L A V +++IER
Sbjct: 1 MGQKINPTGFRLAVTKDWASKWFAKSTDFSTVLKQDIDVRNYLRQKLANASVGRVIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ RI ++SARPG++IGKKG DIE +++ L + IH+++ E+ +PE++A +IA I
Sbjct: 61 AKSARITIHSARPGVVIGKKGEDIEVLKRDLQVLMGVPIHVNIEEIRRPELDAQIIADGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+RV FRRAMKRA+Q+AMR GA G+K++ SGRLNGA+++R+E Y EGRVPL TLRA
Sbjct: 121 AQQLEKRVQFRRAMKRAMQNAMRSGAKGIKIMTSGRLNGADIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
++DY T+ A T YG G+KV+V + S + + + +++
Sbjct: 181 NVDYATSEAHTTYGVLGLKVWVYTEGNIKSSKPEHESKQRKAGRRNA 227
>gi|153824145|ref|ZP_01976812.1| ribosomal protein S3 [Vibrio cholerae B33]
gi|126518331|gb|EAZ75554.1| ribosomal protein S3 [Vibrio cholerae B33]
Length = 199
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 104/199 (52%), Positives = 142/199 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WN+ WFA ++ L D K+R+YL L A +++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNATWFANTKDFADNLDGDFKVRQYLSKELANASLSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++ L+A SI
Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDGQLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIK 199
IDY T+ A T YG G+K
Sbjct: 181 DIDYATSSAHTTYGVIGVK 199
>gi|258455399|ref|ZP_05703359.1| 30S ribosomal protein S3 [Staphylococcus aureus A5937]
gi|257862610|gb|EEV85378.1| 30S ribosomal protein S3 [Staphylococcus aureus A5937]
Length = 219
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 96/212 (45%), Positives = 148/212 (69%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI R+G+ W ++W+A ++ +LLHEDLKIR+++ LK+A V+ + IER
Sbjct: 1 MGQKINPIGLRVGIIRDWEAKWYAE-KDFASLLHEDLKIRKFIDNELKEASVSHVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++ +PG++IGK G++IEK+R KL+ +T+ ++H++V E+ K +++A L+A++I
Sbjct: 60 ANRINIAIHTGKPGMVIGKGGSEIEKLRNKLNALTDKKVHINVIEIKKVDLDARLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R FRR K+A+ AM+ GA G+K SGRL GA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLENRASFRRVQKQAITRAMKLGAKGIKTQVSGRLGGADIARAEQYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
IDY A A+T YG G+KV++ + + +
Sbjct: 180 DIDYAHAEADTTYGKLGVKVWIYRGEVLPTKN 211
>gi|15617112|ref|NP_240325.1| 30S ribosomal protein S3 [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219682419|ref|YP_002468803.1| 30S ribosomal protein S3 [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|11387061|sp|P57585|RS3_BUCAI RecName: Full=30S ribosomal protein S3
gi|254764518|sp|B8D843|RS3_BUCAT RecName: Full=30S ribosomal protein S3
gi|25294467|pir||C84990 30S ribosomal protein S3 [imported] - Buchnera sp. (strain APS)
gi|10039177|dbj|BAB13211.1| 30S ribosomal protein S3 [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219622152|gb|ACL30308.1| 30S ribosomal protein S3 [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|311086817|gb|ADP66898.1| 30S ribosomal protein S3 [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
Length = 233
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 104/212 (49%), Positives = 152/212 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS WFA ++ L D K+R++L L++A +++I+IER
Sbjct: 1 MGQKVHPNGMRLGIIKKWNSVWFANTKDFADHLDSDYKVRQFLMKTLEKASISRIIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +Y+ARPG++IGKKG D+EK+R ++ +T + ++++EV KPE++A L++ SI
Sbjct: 61 AKSIRVTIYTARPGIVIGKKGEDVEKLRISIAKITGVPVQINISEVRKPELDAKLVSDSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV+FRRAMKR+VQ+AMR GA G+KV SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 TSQLERRVMFRRAMKRSVQNAMRQGAKGIKVEVSGRLGGAEIARREWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
+IDY + A T YG G+KV++ + + +
Sbjct: 181 NIDYSISEAHTTYGVIGVKVWIFKGEILGGME 212
>gi|300857768|ref|YP_003782751.1| 30S ribosomal protein S3 [Corynebacterium pseudotuberculosis FRC41]
gi|300685222|gb|ADK28144.1| 30S ribosomal protein S3 [Corynebacterium pseudotuberculosis FRC41]
gi|302205506|gb|ADL09848.1| 30S ribosomal protein S3 [Corynebacterium pseudotuberculosis C231]
gi|302330061|gb|ADL20255.1| 30S ribosomal protein S3 [Corynebacterium pseudotuberculosis 1002]
gi|308275742|gb|ADO25641.1| 30S ribosomal protein S3 [Corynebacterium pseudotuberculosis I19]
Length = 248
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 105/222 (47%), Positives = 149/222 (67%), Gaps = 2/222 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P RLG+ W S W+A Y + ED+++REYL L +AG+A I+IERT
Sbjct: 1 MGQKIHPHGLRLGITSEWKSHWYAD-RNYSEYVAEDIRVREYLVKTLDRAGIADIVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G++ +++RK+L +T ++ L++ EV + NA L+AQSI
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGSEADRLRKELEKLTGKQVALNILEVKNIDANAQLVAQSI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAM + G+KV+ SGRL GAE+SRTE Y EGRVPL TLR
Sbjct: 120 AEQLTNRVAFRRAMRKAIQSAMRQPQVKGIKVVCSGRLGGAEMSRTERYHEGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
A IDYGT A T +G G+KV++ D V + A
Sbjct: 180 AEIDYGTYEAHTTFGRIGVKVWIYKGDVVGGRRESEINAPAE 221
>gi|225387231|ref|ZP_03756995.1| hypothetical protein CLOSTASPAR_00983 [Clostridium asparagiforme
DSM 15981]
gi|225046710|gb|EEG56956.1| hypothetical protein CLOSTASPAR_00983 [Clostridium asparagiforme
DSM 15981]
Length = 218
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 94/211 (44%), Positives = 144/211 (68%), Gaps = 1/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+S+W+A +++ L ED IR++L+ L AG++KI IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAE-ADFADCLVEDYNIRKFLKKRLYSAGISKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++I+Y+A+PG++IGK G +IEK++K++ +T+ ++ + + E+ +P+ +A L+A+SI
Sbjct: 60 SDRVKVIIYTAKPGVVIGKGGAEIEKLKKEVQKLTDKKLFIDIKEIKRPDKDAQLVAESI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE R FRRAMK + M+ G G+K GRL GA+++RTE Y EG +PLQTLRA
Sbjct: 120 AQQLENRTSFRRAMKSTMGRTMKTGVKGIKTAVGGRLGGADIARTEFYSEGTIPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYG A A+T YG G+KV++ + +
Sbjct: 180 DIDYGFAEADTTYGKLGVKVWIYKGEVLPTK 210
>gi|218135275|ref|ZP_03464079.1| hypothetical protein BACPEC_03180 [Bacteroides pectinophilus ATCC
43243]
gi|217990660|gb|EEC56671.1| hypothetical protein BACPEC_03180 [Bacteroides pectinophilus ATCC
43243]
Length = 218
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 92/211 (43%), Positives = 143/211 (67%), Gaps = 1/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+S+W+A + L ED IR++L+ L AG+++I +ERT
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAED-NFADNLVEDYNIRKFLKKRLYSAGISRIEMERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+II+++A+PG++IGK G +IE ++K + +T+ ++ + + EV +P+ +A L+A++I
Sbjct: 60 TDRLKIIIHTAKPGIVIGKGGAEIENLKKDVQKLTDKKLSIDIKEVKRPDKDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE R+ FRRAMK + M+ GA G+K SGRL GA+++RTE Y +G +PLQTLRA
Sbjct: 120 AQQLENRISFRRAMKSCMGRTMKAGAKGIKTSCSGRLGGADMARTEFYSDGTIPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
I+YG A A T YG G+KV++ + +
Sbjct: 180 DINYGFAEANTTYGKVGVKVWIYEGEVLPTK 210
>gi|15925234|ref|NP_372768.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus Mu50]
gi|15927824|ref|NP_375357.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus N315]
gi|21283892|ref|NP_646980.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus MW2]
gi|49484460|ref|YP_041684.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49487026|ref|YP_044247.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|82751833|ref|YP_417574.1| 30S ribosomal protein S3 [Staphylococcus aureus RF122]
gi|87160014|ref|YP_494833.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88196156|ref|YP_500973.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|148268684|ref|YP_001247627.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus JH9]
gi|150394749|ref|YP_001317424.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus JH1]
gi|151222358|ref|YP_001333180.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156980559|ref|YP_001442818.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus Mu3]
gi|253317004|ref|ZP_04840217.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|253729910|ref|ZP_04864075.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253734347|ref|ZP_04868512.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus
TCH130]
gi|255007024|ref|ZP_05145625.2| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257423729|ref|ZP_05600158.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus
55/2053]
gi|257426407|ref|ZP_05602809.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus 65-1322]
gi|257429046|ref|ZP_05605433.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus 68-397]
gi|257431692|ref|ZP_05608055.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus
E1410]
gi|257434653|ref|ZP_05610704.1| SSU ribosomal protein S3 [Staphylococcus aureus subsp. aureus M876]
gi|257794590|ref|ZP_05643569.1| 30S ribosomal protein S3 [Staphylococcus aureus A9781]
gi|258408808|ref|ZP_05681092.1| 30S ribosomal protein S3 [Staphylococcus aureus A9763]
gi|258422407|ref|ZP_05685319.1| SSU ribosomal protein S3 [Staphylococcus aureus A9719]
gi|258422691|ref|ZP_05685596.1| SSU ribosomal protein S3 [Staphylococcus aureus A9635]
gi|258439796|ref|ZP_05690542.1| SSU ribosomal protein S3P [Staphylococcus aureus A9299]
gi|258442648|ref|ZP_05691208.1| ribosomal protein S3 [Staphylococcus aureus A8115]
gi|258446653|ref|ZP_05694808.1| 30S ribosomal protein S3 [Staphylococcus aureus A6300]
gi|258450229|ref|ZP_05698321.1| ribosomal protein S3 [Staphylococcus aureus A6224]
gi|258450761|ref|ZP_05698820.1| 30S ribosomal protein S3 [Staphylococcus aureus A5948]
gi|262048508|ref|ZP_06021392.1| 30S ribosomal protein S3 [Staphylococcus aureus D30]
gi|262052033|ref|ZP_06024244.1| 30S ribosomal protein S3 [Staphylococcus aureus 930918-3]
gi|269203877|ref|YP_003283146.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus ED98]
gi|282893682|ref|ZP_06301914.1| 30S ribosomal protein S3 [Staphylococcus aureus A8117]
gi|282902147|ref|ZP_06310040.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus C160]
gi|282906587|ref|ZP_06314435.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282909557|ref|ZP_06317368.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282911804|ref|ZP_06319600.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus WBG10049]
gi|282915093|ref|ZP_06322870.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus M899]
gi|282917589|ref|ZP_06325341.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus D139]
gi|282920819|ref|ZP_06328537.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus C427]
gi|282922113|ref|ZP_06329809.1| 30S ribosomal protein S3 [Staphylococcus aureus A9765]
gi|282925724|ref|ZP_06333372.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus C101]
gi|282926790|ref|ZP_06334417.1| 30S ribosomal protein S3 [Staphylococcus aureus A10102]
gi|283767336|ref|ZP_06340251.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus H19]
gi|283959022|ref|ZP_06376463.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus
A017934/97]
gi|284025270|ref|ZP_06379668.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus 132]
gi|293497497|ref|ZP_06665351.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus
58-424]
gi|293511072|ref|ZP_06669769.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus M809]
gi|293549678|ref|ZP_06672350.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus M1015]
gi|294848777|ref|ZP_06789522.1| 30S ribosomal protein S3 [Staphylococcus aureus A9754]
gi|295404920|ref|ZP_06814733.1| 30S ribosomal protein S3 [Staphylococcus aureus A8819]
gi|295428827|ref|ZP_06821451.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296275965|ref|ZP_06858472.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus MR1]
gi|297209943|ref|ZP_06926339.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297243978|ref|ZP_06927868.1| 30S ribosomal protein S3 [Staphylococcus aureus A8796]
gi|297589687|ref|ZP_06948328.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus MN8]
gi|300910955|ref|ZP_07128405.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus
TCH70]
gi|304379428|ref|ZP_07362163.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|54039503|sp|P66553|RS3_STAAN RecName: Full=30S ribosomal protein S3
gi|54039504|sp|P66554|RS3_STAAW RecName: Full=30S ribosomal protein S3
gi|54041960|sp|P66552|RS3_STAAM RecName: Full=30S ribosomal protein S3
gi|61215543|sp|Q6G777|RS3_STAAS RecName: Full=30S ribosomal protein S3
gi|61215547|sp|Q6GEI9|RS3_STAAR RecName: Full=30S ribosomal protein S3
gi|91207841|sp|Q2YYQ2|RS3_STAAB RecName: Full=30S ribosomal protein S3
gi|123003431|sp|Q2FW12|RS3_STAA8 RecName: Full=30S ribosomal protein S3
gi|123763261|sp|Q2FEP5|RS3_STAA3 RecName: Full=30S ribosomal protein S3
gi|171769947|sp|A7X5F5|RS3_STAA1 RecName: Full=30S ribosomal protein S3
gi|172049042|sp|A6QJ86|RS3_STAAE RecName: Full=30S ribosomal protein S3
gi|13702044|dbj|BAB43336.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus N315]
gi|14248017|dbj|BAB58406.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus Mu50]
gi|21205334|dbj|BAB96028.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus MW2]
gi|49242589|emb|CAG41310.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49245469|emb|CAG43946.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|82657364|emb|CAI81805.1| 30S ribosomal protein S3 [Staphylococcus aureus RF122]
gi|87125988|gb|ABD20502.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87203714|gb|ABD31524.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|147741753|gb|ABQ50051.1| SSU ribosomal protein S3P [Staphylococcus aureus subsp. aureus JH9]
gi|149947201|gb|ABR53137.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus JH1]
gi|150375158|dbj|BAF68418.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156722694|dbj|BAF79111.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus Mu3]
gi|253726357|gb|EES95086.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253727664|gb|EES96393.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus
TCH130]
gi|257272747|gb|EEV04849.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus
55/2053]
gi|257276038|gb|EEV07489.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus 65-1322]
gi|257279527|gb|EEV10114.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus 68-397]
gi|257282571|gb|EEV12703.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus
E1410]
gi|257285249|gb|EEV15365.1| SSU ribosomal protein S3 [Staphylococcus aureus subsp. aureus M876]
gi|257788562|gb|EEV26902.1| 30S ribosomal protein S3 [Staphylococcus aureus A9781]
gi|257840491|gb|EEV64951.1| 30S ribosomal protein S3 [Staphylococcus aureus A9763]
gi|257841838|gb|EEV66275.1| SSU ribosomal protein S3 [Staphylococcus aureus A9719]
gi|257847102|gb|EEV71111.1| SSU ribosomal protein S3 [Staphylococcus aureus A9635]
gi|257847572|gb|EEV71574.1| SSU ribosomal protein S3P [Staphylococcus aureus A9299]
gi|257851769|gb|EEV75703.1| ribosomal protein S3 [Staphylococcus aureus A8115]
gi|257854721|gb|EEV77669.1| 30S ribosomal protein S3 [Staphylococcus aureus A6300]
gi|257856321|gb|EEV79230.1| ribosomal protein S3 [Staphylococcus aureus A6224]
gi|257861544|gb|EEV84346.1| 30S ribosomal protein S3 [Staphylococcus aureus A5948]
gi|259160088|gb|EEW45121.1| 30S ribosomal protein S3 [Staphylococcus aureus 930918-3]
gi|259163366|gb|EEW47924.1| 30S ribosomal protein S3 [Staphylococcus aureus D30]
gi|262076167|gb|ACY12140.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus ED98]
gi|269941833|emb|CBI50243.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus TW20]
gi|282312553|gb|EFB42957.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus C101]
gi|282315234|gb|EFB45618.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus C427]
gi|282318551|gb|EFB48909.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus D139]
gi|282320814|gb|EFB51148.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus M899]
gi|282323500|gb|EFB53816.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus WBG10049]
gi|282326536|gb|EFB56838.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282329486|gb|EFB59007.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282591241|gb|EFB96314.1| 30S ribosomal protein S3 [Staphylococcus aureus A10102]
gi|282593581|gb|EFB98574.1| 30S ribosomal protein S3 [Staphylococcus aureus A9765]
gi|282596606|gb|EFC01565.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus C160]
gi|282763740|gb|EFC03868.1| 30S ribosomal protein S3 [Staphylococcus aureus A8117]
gi|283461215|gb|EFC08299.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus H19]
gi|283471466|emb|CAQ50677.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus ST398]
gi|283788614|gb|EFC27441.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus
A017934/97]
gi|285817906|gb|ADC38393.1| 30S ribosomal protein S3 [Staphylococcus aureus 04-02981]
gi|290918725|gb|EFD95801.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus M1015]
gi|291096428|gb|EFE26686.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus
58-424]
gi|291466059|gb|EFF08588.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus M809]
gi|294824156|gb|EFG40580.1| 30S ribosomal protein S3 [Staphylococcus aureus A9754]
gi|294969865|gb|EFG45883.1| 30S ribosomal protein S3 [Staphylococcus aureus A8819]
gi|295127176|gb|EFG56818.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296885616|gb|EFH24553.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297178756|gb|EFH38001.1| 30S ribosomal protein S3 [Staphylococcus aureus A8796]
gi|297578198|gb|EFH96911.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus MN8]
gi|298695500|gb|ADI98722.1| SSU ribosomal protein S3 [Staphylococcus aureus subsp. aureus
ED133]
gi|300887935|gb|EFK83130.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus
TCH70]
gi|302333880|gb|ADL24073.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus
JKD6159]
gi|304341960|gb|EFM07864.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|312437345|gb|ADQ76416.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus
TCH60]
gi|312830593|emb|CBX35435.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315129676|gb|EFT85667.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus
CGS03]
gi|315193496|gb|EFU23892.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus
CGS00]
gi|315198226|gb|EFU28557.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus
CGS01]
gi|320140218|gb|EFW32077.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus MRSA131]
gi|320143488|gb|EFW35269.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus MRSA177]
gi|323440076|gb|EGA97791.1| 30S ribosomal protein S3 [Staphylococcus aureus O11]
gi|323442750|gb|EGB00376.1| 30S ribosomal protein S3 [Staphylococcus aureus O46]
gi|329314927|gb|AEB89340.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus
T0131]
gi|329723700|gb|EGG60229.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus 21172]
gi|329730267|gb|EGG66657.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus 21193]
gi|329732065|gb|EGG68420.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus 21189]
Length = 217
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 96/214 (44%), Positives = 150/214 (70%), Gaps = 1/214 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI R+G+ W ++W+A ++ +LLHEDLKIR+++ LK+A V+ + IER
Sbjct: 1 MGQKINPIGLRVGIIRDWEAKWYAE-KDFASLLHEDLKIRKFIDNELKEASVSHVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++ +PG++IGK G++IEK+R KL+ +T+ ++H++V E+ K +++A L+A++I
Sbjct: 60 ANRINIAIHTGKPGMVIGKGGSEIEKLRNKLNALTDKKVHINVIEIKKVDLDARLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R FRR K+A+ AM+ GA G+K SGRL GA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLENRASFRRVQKQAITRAMKLGAKGIKTQVSGRLGGADIARAEQYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
IDY A A+T YG G+KV++ + + +++
Sbjct: 180 DIDYAHAEADTTYGKLGVKVWIYRGEVLPTKNTS 213
>gi|225076401|ref|ZP_03719600.1| hypothetical protein NEIFLAOT_01446 [Neisseria flavescens
NRL30031/H210]
gi|241759632|ref|ZP_04757733.1| ribosomal protein S3 [Neisseria flavescens SK114]
gi|319639555|ref|ZP_07994302.1| 30S ribosomal protein S3 [Neisseria mucosa C102]
gi|224952249|gb|EEG33458.1| hypothetical protein NEIFLAOT_01446 [Neisseria flavescens
NRL30031/H210]
gi|241320004|gb|EER56385.1| ribosomal protein S3 [Neisseria flavescens SK114]
gi|317399126|gb|EFV79800.1| 30S ribosomal protein S3 [Neisseria mucosa C102]
Length = 230
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 107/222 (48%), Positives = 156/222 (70%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRL V W S+WFA+ +++ +L +D+ +R YL+ L A V +++IER
Sbjct: 1 MGQKINPTGFRLAVTKDWASKWFAKSTDFSTVLKQDIDVRNYLRKKLANASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ RI ++SARPG++IGKKG DIE +++ L + +H+++ E+ +PE++A +IA I
Sbjct: 61 AKSARITIHSARPGVVIGKKGEDIEILKRDLQALMGVPVHVNIEEIRRPELDAQIIADGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+RV FRRAMKRA+Q+AMR GA G+K++ SGRLNGA+++R+E Y EGRVPL TLRA
Sbjct: 121 AQQLEKRVQFRRAMKRAMQNAMRSGAKGIKIMTSGRLNGADIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
++DY T+ A T YG G+KV+V + S + +
Sbjct: 181 NVDYATSEAHTTYGVLGLKVWVYTEGNIKSSKPEHEKKQRKA 222
>gi|311896564|dbj|BAJ28972.1| putative ribosomal protein S3 [Kitasatospora setae KM-6054]
Length = 277
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 99/227 (43%), Positives = 153/227 (67%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FRLG++ + SRW+A Y + ED+ IR + +++AG++K+ IERT
Sbjct: 1 MGQKVNPHGFRLGISTDFKSRWYAD-KLYKDYVKEDVAIRRLMTKGMERAGISKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + +KIR L +T ++ L++ EV PE++A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADKIRGNLEKLTGKQVQLNILEVKNPELDAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++++QS M+ GA G+KV SGRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLSSRVSFRRAMRKSMQSTMKAGAKGIKVQCSGRLGGAEMSRSEFYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
++DYG A+T +G G+KV++ D + ++ A R + +
Sbjct: 180 NVDYGFFEAKTTFGRIGVKVWIYKGDVKNIAEVRAENAAARSGNRPA 226
>gi|325068037|ref|ZP_08126710.1| ribosomal protein S3 [Actinomyces oris K20]
Length = 218
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 101/211 (47%), Positives = 148/211 (70%), Gaps = 4/211 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQK+NP FRLG+ SRWFA G Y + ED+KIR ++ +++AG++K+
Sbjct: 1 MGQKVNPTGFRLGITTDHRSRWFADSTKPGQRYRDFVEEDVKIRRLMEDGMERAGISKVD 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + E++R +L +T ++ L++ EV P+++A L+
Sbjct: 61 IERTRDRVRVDLHTARPGIVIGRRGAEAERLRGQLEKLTGKQVQLNILEVKSPDLDAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ IA+QL RV FRRAM++ +QSAMR GA G++V SGRL GAE+SR+E Y EGRVPL
Sbjct: 121 AQGIAEQLASRVSFRRAMRKGMQSAMRAGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
TLRA+IDYG A+T +G G+KV++ D
Sbjct: 181 TLRANIDYGFYEAKTTFGRLGVKVWIYKGDI 211
>gi|320533930|ref|ZP_08034500.1| ribosomal protein S3 [Actinomyces sp. oral taxon 171 str. F0337]
gi|320133850|gb|EFW26228.1| ribosomal protein S3 [Actinomyces sp. oral taxon 171 str. F0337]
Length = 215
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 101/211 (47%), Positives = 148/211 (70%), Gaps = 4/211 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQK+NP FRLG+ SRWFA G Y + ED+KIR ++ +++AG++K+
Sbjct: 1 MGQKVNPTGFRLGITTDHRSRWFADSTKPGQRYRDFVEEDVKIRRLMEDGMERAGISKVD 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + E++R +L +T ++ L++ EV P+++A L+
Sbjct: 61 IERTRDRVRVDLHTARPGIVIGRRGAEAERLRGQLEKLTGKQVQLNILEVKSPDLDAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ IA+QL RV FRRAM++ +QSAMR GA G++V SGRL GAE+SR+E Y EGRVPL
Sbjct: 121 AQGIAEQLASRVSFRRAMRKGMQSAMRAGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
TLRA+IDYG A+T +G G+KV++ D
Sbjct: 181 TLRANIDYGFYEAKTTFGRLGVKVWIYKGDI 211
>gi|258591322|emb|CBE67621.1| 30S ribosomal subunit protein S3 [NC10 bacterium 'Dutch sediment']
Length = 235
Score = 253 bits (647), Expect = 1e-65, Method: Composition-based stats.
Identities = 111/229 (48%), Positives = 151/229 (65%), Gaps = 6/229 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG W SRWFA Y LHEDLK R +++ + AGV+ I IER
Sbjct: 1 MGQKVHPVGFRLGFIKPWRSRWFA-MKGYADALHEDLKFRRFIKERVYHAGVSGIDIERK 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+++++ARPG+IIGKKG++++K++ LS MT I L + EV + E++A LIA+ I
Sbjct: 60 ADQIRVVIHTARPGIIIGKKGSEVDKLKAALSGMTKKPIQLDIVEVRRAELDAQLIAEQI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL RRV FRRAMK+ VQS+MR GA GV++ +GRL GAE++R E Y EGR+PL TLRA
Sbjct: 120 ASQLMRRVAFRRAMKKTVQSSMRLGAQGVQIACAGRLAGAEIARREWYREGRMPLNTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-----SDSTIPAAEHRVVE 224
+IDYG A+T YG G+K +V + + D + IP A R
Sbjct: 180 NIDYGFTQAKTTYGLIGVKCWVYHGEAMPDTLAAKQEREIPQAAPRRPR 228
>gi|303246999|ref|ZP_07333275.1| ribosomal protein S3 [Desulfovibrio fructosovorans JJ]
gi|302491706|gb|EFL51589.1| ribosomal protein S3 [Desulfovibrio fructosovorans JJ]
Length = 213
Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats.
Identities = 110/215 (51%), Positives = 156/215 (72%), Gaps = 2/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG N W SRWF+ +Y A + ED KIR++++ +L AG++KI IER
Sbjct: 1 MGQKVHPYGFRLGYNKNWLSRWFS-KKDYPAFVFEDNKIRKFVKKNLYHAGISKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+I+++ARPG++IG+KGT+IEK+R L E + VNE+ +PEI++ L+A++I
Sbjct: 60 GGKIRLIIHTARPGIVIGRKGTEIEKVRGDLKQRFGREFTVEVNEIRRPEIDSQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV FRRAMKR V + +FGA+G+KV +GRL GAE++R+E Y +GRVPLQTLRA
Sbjct: 120 ALQLERRVAFRRAMKRTVGLSRKFGAEGIKVSCAGRLAGAEIARSEWYRDGRVPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDYG A+A+T YG G+KV++ + E+ D +
Sbjct: 180 DIDYGYAIAKTTYGVIGVKVWIF-KGEILDHEVEA 213
>gi|297571929|ref|YP_003697703.1| ribosomal protein S3 [Arcanobacterium haemolyticum DSM 20595]
gi|296932276|gb|ADH93084.1| ribosomal protein S3 [Arcanobacterium haemolyticum DSM 20595]
Length = 274
Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats.
Identities = 98/211 (46%), Positives = 142/211 (67%), Gaps = 4/211 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQK+NP FRLG+ S+WFA G Y + ED+KIR ++ L++AG++++
Sbjct: 1 MGQKVNPTGFRLGITTEHRSKWFADSSKEGQRYRDYIEEDIKIRRKVENDLERAGISRVN 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IER + I +++ARPG++IG++G + +++R+ L +T + L++ EV PE +A L+
Sbjct: 61 IERRTERVVIDIHTARPGIVIGRRGAEADRLRQDLEKLTGKAVQLNILEVKNPEADAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ IA+QL RV FRRAM++ +QSA R GA G++V SGRL GAE+SR E Y EGRVPL
Sbjct: 121 AQGIAEQLAARVSFRRAMRKGIQSAQRAGAKGIRVQCSGRLGGAEMSRAEFYREGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
TLRA+IDYG A T +G G+KV++ D
Sbjct: 181 TLRANIDYGFYEARTTFGRIGVKVWIYRGDI 211
>gi|269792788|ref|YP_003317692.1| 30S ribosomal protein S3 [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269100423|gb|ACZ19410.1| ribosomal protein S3 [Thermanaerovibrio acidaminovorans DSM 6589]
Length = 223
Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats.
Identities = 94/222 (42%), Positives = 147/222 (66%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ +RLGV W SRW+A Y LHEDL++RE+++ AG++++ IER
Sbjct: 1 MGQKVHPVGYRLGVIYDWESRWYADKKTYAKNLHEDLELREWIKKRWGHAGISRVEIERI 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R V++ARPG++IGK G +I+ +R +L T + + +++ E+ P+ +A ++++ I
Sbjct: 61 GNVMRFTVWTARPGVVIGKGGAEIQLVRDELQRKTGNRVMINIQEIKNPDADAQVVSEGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A LERRV FRRAMK+++ AM+ GA G+K+ SGRL GAE++R+E YLEG++PL TLRA
Sbjct: 121 ASALERRVSFRRAMKQSIFRAMKAGAKGIKIQCSGRLGGAEIARSEWYLEGQLPLSTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
I YG +VA T YG G+KV++ + + + + A
Sbjct: 181 DISYGYSVARTIYGVIGVKVWIYRGEVIGGAKAEPQVASRDR 222
>gi|164686533|ref|ZP_02210561.1| hypothetical protein CLOBAR_00100 [Clostridium bartlettii DSM
16795]
gi|164604402|gb|EDQ97867.1| hypothetical protein CLOBAR_00100 [Clostridium bartlettii DSM
16795]
Length = 262
Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats.
Identities = 109/220 (49%), Positives = 148/220 (67%), Gaps = 1/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFA-RGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER 59
MGQK+NP R+GV W+SRWF E+G+LL ED +IR +L+ L AGVAKI IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWFTTDKKEFGSLLLEDHQIRTFLKERLYVAGVAKIEIER 60
Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
+ RI ++ A+PG++IG G IE ++ +L MT + +++ EV + NA L+A++
Sbjct: 61 SANKIRIDLHVAKPGVVIGAAGAKIEALKAELEKMTKKTVIVNIIEVKGIDRNAQLVAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA +ERRV FRRAMK+AVQ A++ GA G+KV ASGRL GAE++RTE Y EG VPLQTLR
Sbjct: 121 IALAIERRVAFRRAMKQAVQRALKSGAKGIKVAASGRLGGAEMARTEGYSEGNVPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
+ IDYG A A+T YG GIKV++ + + + P E
Sbjct: 181 SDIDYGFAEADTTYGKIGIKVWICNGEVLPTRNGVNPREE 220
>gi|282860816|ref|ZP_06269882.1| ribosomal protein S3 [Streptomyces sp. ACTE]
gi|282564552|gb|EFB70088.1| ribosomal protein S3 [Streptomyces sp. ACTE]
gi|320009096|gb|ADW03946.1| ribosomal protein S3 [Streptomyces flavogriseus ATCC 33331]
Length = 278
Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats.
Identities = 96/227 (42%), Positives = 153/227 (67%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FRLG+ + SRW+A Y + ED+ IR + +++AG++K+ IERT
Sbjct: 1 MGQKVNPHGFRLGITTDFKSRWYAD-KLYKDYVKEDVAIRRMMTKGMERAGISKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV PE++A L+AQ++
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQVQLNILEVKNPEVDAQLVAQAV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++++QS M+ GA G+K+ GRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLSSRVSFRRAMRKSMQSTMKAGAKGIKIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
++DYG A+T +G G+KV++ D + ++ A R + +
Sbjct: 180 NVDYGFFEAKTTFGRIGVKVWIYKGDVKNIAEVRAENAAARAGNRPA 226
>gi|69247175|ref|ZP_00604237.1| ribosomal protein S3 [Enterococcus faecium DO]
gi|227550726|ref|ZP_03980775.1| ribosomal protein S3 [Enterococcus faecium TX1330]
gi|257878731|ref|ZP_05658384.1| ribosomal protein S3 [Enterococcus faecium 1,230,933]
gi|257881372|ref|ZP_05661025.1| ribosomal protein S3 [Enterococcus faecium 1,231,502]
gi|257885640|ref|ZP_05665293.1| ribosomal protein S3 [Enterococcus faecium 1,231,501]
gi|257888015|ref|ZP_05667668.1| ribosomal protein S3 [Enterococcus faecium 1,141,733]
gi|257890590|ref|ZP_05670243.1| ribosomal protein S3 [Enterococcus faecium 1,231,410]
gi|257893180|ref|ZP_05672833.1| ribosomal protein S3 [Enterococcus faecium 1,231,408]
gi|257896366|ref|ZP_05676019.1| ribosomal protein S3 [Enterococcus faecium Com12]
gi|257899340|ref|ZP_05678993.1| ribosomal protein S3 [Enterococcus faecium Com15]
gi|258615205|ref|ZP_05712975.1| 30S ribosomal protein S3 [Enterococcus faecium DO]
gi|260558293|ref|ZP_05830489.1| ribosomal protein S3 [Enterococcus faecium C68]
gi|261206999|ref|ZP_05921688.1| ribosomal protein S3 [Enterococcus faecium TC 6]
gi|293379452|ref|ZP_06625596.1| ribosomal protein S3 [Enterococcus faecium PC4.1]
gi|293553885|ref|ZP_06674491.1| ribosomal protein S3 [Enterococcus faecium E1039]
gi|293562952|ref|ZP_06677419.1| ribosomal protein S3 [Enterococcus faecium E1162]
gi|293567925|ref|ZP_06679266.1| ribosomal protein S3 [Enterococcus faecium E1071]
gi|293570690|ref|ZP_06681740.1| ribosomal protein S3 [Enterococcus faecium E980]
gi|294615387|ref|ZP_06695260.1| ribosomal protein S3 [Enterococcus faecium E1636]
gi|294618314|ref|ZP_06697895.1| ribosomal protein S3 [Enterococcus faecium E1679]
gi|294621084|ref|ZP_06700275.1| ribosomal protein S3 [Enterococcus faecium U0317]
gi|314937614|ref|ZP_07844940.1| ribosomal protein S3 [Enterococcus faecium TX0133a04]
gi|314942887|ref|ZP_07849700.1| ribosomal protein S3 [Enterococcus faecium TX0133C]
gi|314947977|ref|ZP_07851381.1| ribosomal protein S3 [Enterococcus faecium TX0082]
gi|314950894|ref|ZP_07853963.1| ribosomal protein S3 [Enterococcus faecium TX0133A]
gi|314991458|ref|ZP_07856935.1| ribosomal protein S3 [Enterococcus faecium TX0133B]
gi|314995021|ref|ZP_07860141.1| ribosomal protein S3 [Enterococcus faecium TX0133a01]
gi|68194940|gb|EAN09408.1| ribosomal protein S3 [Enterococcus faecium DO]
gi|227180187|gb|EEI61159.1| ribosomal protein S3 [Enterococcus faecium TX1330]
gi|257812959|gb|EEV41717.1| ribosomal protein S3 [Enterococcus faecium 1,230,933]
gi|257817030|gb|EEV44358.1| ribosomal protein S3 [Enterococcus faecium 1,231,502]
gi|257821496|gb|EEV48626.1| ribosomal protein S3 [Enterococcus faecium 1,231,501]
gi|257824069|gb|EEV51001.1| ribosomal protein S3 [Enterococcus faecium 1,141,733]
gi|257826950|gb|EEV53576.1| ribosomal protein S3 [Enterococcus faecium 1,231,410]
gi|257829559|gb|EEV56166.1| ribosomal protein S3 [Enterococcus faecium 1,231,408]
gi|257832931|gb|EEV59352.1| ribosomal protein S3 [Enterococcus faecium Com12]
gi|257837252|gb|EEV62326.1| ribosomal protein S3 [Enterococcus faecium Com15]
gi|260075467|gb|EEW63773.1| ribosomal protein S3 [Enterococcus faecium C68]
gi|260078627|gb|EEW66329.1| ribosomal protein S3 [Enterococcus faecium TC 6]
gi|291589510|gb|EFF21317.1| ribosomal protein S3 [Enterococcus faecium E1071]
gi|291591761|gb|EFF23397.1| ribosomal protein S3 [Enterococcus faecium E1636]
gi|291595408|gb|EFF26720.1| ribosomal protein S3 [Enterococcus faecium E1679]
gi|291599320|gb|EFF30346.1| ribosomal protein S3 [Enterococcus faecium U0317]
gi|291601937|gb|EFF32183.1| ribosomal protein S3 [Enterococcus faecium E1039]
gi|291605078|gb|EFF34545.1| ribosomal protein S3 [Enterococcus faecium E1162]
gi|291609162|gb|EFF38434.1| ribosomal protein S3 [Enterococcus faecium E980]
gi|292641975|gb|EFF60141.1| ribosomal protein S3 [Enterococcus faecium PC4.1]
gi|313590747|gb|EFR69592.1| ribosomal protein S3 [Enterococcus faecium TX0133a01]
gi|313593938|gb|EFR72783.1| ribosomal protein S3 [Enterococcus faecium TX0133B]
gi|313596903|gb|EFR75748.1| ribosomal protein S3 [Enterococcus faecium TX0133A]
gi|313598359|gb|EFR77204.1| ribosomal protein S3 [Enterococcus faecium TX0133C]
gi|313642991|gb|EFS07571.1| ribosomal protein S3 [Enterococcus faecium TX0133a04]
gi|313645575|gb|EFS10155.1| ribosomal protein S3 [Enterococcus faecium TX0082]
Length = 218
Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats.
Identities = 96/219 (43%), Positives = 149/219 (68%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+G+ W+++W+A EY LHEDL+IR+++ L A V+ + IER
Sbjct: 1 MGQKVHPIGMRVGIIRDWDAKWYAE-KEYAEFLHEDLRIRKFISTKLADAAVSTVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK G+++E +RK+L+ +T IH+++ E+ KP+++A L+ + I
Sbjct: 60 TGRVNISIHTAKPGMVIGKGGSEVESLRKELNKLTGKRIHINIVEIKKPDLDAKLVGEGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRA K+A+Q +MR GA G+K SGRLNGA+++R+E Y EG VPL TLRA
Sbjct: 120 ARQLENRVAFRRAQKQAIQRSMRAGAQGIKTQVSGRLNGADIARSEGYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDY A+T YG G+KV++ + + +T +
Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEILPTKKNTEKGGK 218
>gi|313667447|ref|YP_004047731.1| 30S ribosomal protein S3 [Neisseria lactamica ST-640]
gi|309379153|emb|CBX22284.1| 30S ribosomal protein S3 [Neisseria lactamica Y92-1009]
gi|313004909|emb|CBN86335.1| 30S ribosomal protein S3 [Neisseria lactamica 020-06]
Length = 231
Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats.
Identities = 111/224 (49%), Positives = 159/224 (70%), Gaps = 2/224 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRL V W S+WFA+ +++ A+L +D+ +R YL+ L A V +++IER
Sbjct: 1 MGQKINPTGFRLAVTKDWASKWFAKSTDFSAVLKQDIDVRNYLRKKLANASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ RI ++S+RPG++IGKKG DIE +++ L + +H+++ E+ KPE++A +IA I
Sbjct: 61 AKSARITIHSSRPGVVIGKKGEDIEVLKRDLQALMGVPVHVNIEEIRKPELDAQIIADGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+RV FRRAMKRA+Q+AMR GA G+K++ SGRLNGA+++R+E Y EGRVPL TLRA
Sbjct: 121 AQQLEKRVQFRRAMKRAMQNAMRSGAKGIKIMTSGRLNGADIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
++DY T+ A T YG G+KV+V V S P E + +
Sbjct: 181 NVDYATSEAHTTYGVLGLKVWVYTEGNV--KASAKPEHEKKQRK 222
>gi|289548385|ref|YP_003473373.1| ribosomal protein S3 [Thermocrinis albus DSM 14484]
gi|289182002|gb|ADC89246.1| ribosomal protein S3 [Thermocrinis albus DSM 14484]
Length = 234
Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats.
Identities = 107/231 (46%), Positives = 159/231 (68%), Gaps = 4/231 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +PI FRLG+ W S+W+A G +Y LLHEDLKI+ Y++ AG++++++ER
Sbjct: 1 MGQKTHPIGFRLGIIKDWTSKWYAEGKDYTQLLHEDLKIKRYIKERYASAGISRVVVERM 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-TNSEIHLSVNEVPKPEINATLIAQS 119
+ ++ + +ARPG+IIG+KG ++E+++K L M I ++V+EV PE++A L+A+
Sbjct: 61 AEKVKVRILAARPGIIIGRKGAEVEQLKKDLEKMAPGKIITITVDEVRTPELDAQLVAEE 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA Q+ERRV RRAMKRA+ +A++ GA GVKV GR+ GAEL+R E +L GR+PLQTLR
Sbjct: 121 IALQIERRVSHRRAMKRAIDNAIKAGAKGVKVQVKGRIGGAELARAEWFLVGRMPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEV-SDSDSTIPAAEH--RVVEKDS 227
A IDYG AVA+T YG G+KV++ D + + + E + EK++
Sbjct: 181 ADIDYGFAVAQTKYGVLGVKVWIYKGDILKGGKEEIVKKIEEDLKRAEKEA 231
>gi|261400058|ref|ZP_05986183.1| ribosomal protein S3 [Neisseria lactamica ATCC 23970]
gi|269210284|gb|EEZ76739.1| ribosomal protein S3 [Neisseria lactamica ATCC 23970]
Length = 231
Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats.
Identities = 112/224 (50%), Positives = 159/224 (70%), Gaps = 2/224 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRL V W S+WFA+ +++ A+L +D+ +R YL+ L A V +++IER
Sbjct: 1 MGQKINPTGFRLAVTKDWASKWFAKSTDFSAVLKQDIDVRNYLRKKLANASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ RI ++SARPG++IGKKG DIE +++ L + +H+++ E+ KPE++A +IA I
Sbjct: 61 AKSARITIHSARPGVVIGKKGEDIEVLKRDLQALMGVPVHVNIEEIRKPELDAQIIADGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+RV FRRAMKRA+Q+AMR GA G+K++ SGRLNGA+++R+E Y EGRVPL TLRA
Sbjct: 121 AQQLEKRVQFRRAMKRAMQNAMRSGAKGIKIMTSGRLNGADIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
++DY T+ A T YG G+KV+V V S P E + +
Sbjct: 181 NVDYATSEAHTTYGVLGLKVWVYTEGNV--KASAKPEHEKKQRK 222
>gi|331268419|ref|YP_004394911.1| 30S ribosomal protein S3 [Clostridium botulinum BKT015925]
gi|329124969|gb|AEB74914.1| ribosomal protein S3 [Clostridium botulinum BKT015925]
Length = 221
Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats.
Identities = 98/221 (44%), Positives = 145/221 (65%), Gaps = 1/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+GV W+++W+A + L ED KIR++++ AGVAK IERT
Sbjct: 1 MGQKVHPHGLRVGVIKDWDAKWYANNQNFADNLIEDDKIRKFIKKKCFSAGVAKTEIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119
K +I +++ +PG+IIGK G IE+++ ++ +M + +++ EV +PE +A L+A++
Sbjct: 61 PKRVKINIHTGKPGMIIGKGGKGIEELKSEILSMIKEKNVIINIVEVKRPETDAQLMAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IAQQLE+R+ FRRAMK+ +Q AMR+G GVK SGRL GAE++RTE Y EG +PLQTLR
Sbjct: 121 IAQQLEKRISFRRAMKQTIQRAMRYGVKGVKTACSGRLGGAEIARTEQYHEGTIPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
A IDYG A A+T YG G+KV++ + +
Sbjct: 181 ADIDYGFAEADTTYGKIGVKVWLYRGEVLPAKKVRTQEISQ 221
>gi|156743942|ref|YP_001434071.1| 30S ribosomal protein S3 [Roseiflexus castenholzii DSM 13941]
gi|156235270|gb|ABU60053.1| ribosomal protein S3 [Roseiflexus castenholzii DSM 13941]
Length = 260
Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats.
Identities = 100/227 (44%), Positives = 150/227 (66%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG+K++PI FRLG W S+WFA Y LLHED+ +R+ + L+ AGVA+I IER+
Sbjct: 1 MGRKVHPIGFRLGYIKDWQSKWFAE-RNYTELLHEDVMLRKIIAKELENAGVARIDIERS 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ V++A+PG++IGK+G ++++R++L+ T ++ L++ E+ +PE+ A L+A+SI
Sbjct: 60 ANKVEVTVHTAKPGIVIGKRGAKVDELREELARRTGKKVKLNIQEIHQPELEAQLVAESI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+ +RV ++RAMK+AVQ AMR GA GVK+ SGRL GAE++R +GRVPL TLRA
Sbjct: 120 AEQINKRVSYKRAMKQAVQRAMRLGAQGVKIKCSGRLAGAEMARIAWERDGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDY A T YG G+KV++ D D + + V + S
Sbjct: 180 DIDYAQVHAHTTYGRIGVKVWIYKGDVFPDQKGQLQPTQPVVAARSS 226
>gi|297159603|gb|ADI09315.1| 30S ribosomal protein S3 [Streptomyces bingchenggensis BCW-1]
Length = 278
Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats.
Identities = 97/227 (42%), Positives = 152/227 (66%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FRLG+ + SRW+A Y + ED+ IR + +++AG++K+ IERT
Sbjct: 1 MGQKVNPHGFRLGITTDFKSRWYAD-KLYKDYVKEDVAIRRMMTKGMERAGISKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV PE++A L+AQ++
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQVQLNILEVKNPEVDAQLVAQAV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++++QS M+ GA G+K+ GRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLSSRVSFRRAMRKSMQSTMKAGAKGIKIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
++DYG A T +G G+KV++ D + ++ A R + S
Sbjct: 180 NVDYGFFEARTTFGRIGVKVWIYKGDVKNIAEVRAENAAARAGNRPS 226
>gi|331702074|ref|YP_004399033.1| 30S ribosomal protein S3 [Lactobacillus buchneri NRRL B-30929]
gi|329129417|gb|AEB73970.1| ribosomal protein S3 [Lactobacillus buchneri NRRL B-30929]
Length = 221
Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats.
Identities = 94/219 (42%), Positives = 149/219 (68%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KINP R+G+ W ++W+A G +Y A L EDL+IR+Y++ L A V+ + IER
Sbjct: 1 MGNKINPNGLRVGIIRDWEAKWYA-GKDYAAYLKEDLQIRKYIEKRLANASVSTVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G+++E +RK+L+++T +H+++ E+ KP+++A L+ ++I
Sbjct: 60 ANRVNVSIHTAKPGMVIGKGGSEVENLRKELNDLTGKRVHINIIEIKKPDLDAKLVGENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRAM++A+Q MR GA G+K +GRLNGA+++R E Y +G VPL TLRA
Sbjct: 120 ARQLEGRVAFRRAMRQAMQRTMRSGAKGIKTQVAGRLNGADMARVESYSDGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDY A T YGS G+K ++ + + + AA+
Sbjct: 180 DIDYSWVEAFTTYGSIGVKTWIYRGEVLPEKPKDSNAAK 218
>gi|255067452|ref|ZP_05319307.1| ribosomal protein S3 [Neisseria sicca ATCC 29256]
gi|261378047|ref|ZP_05982620.1| ribosomal protein S3 [Neisseria cinerea ATCC 14685]
gi|298370585|ref|ZP_06981900.1| ribosomal protein S3 [Neisseria sp. oral taxon 014 str. F0314]
gi|255048247|gb|EET43711.1| ribosomal protein S3 [Neisseria sicca ATCC 29256]
gi|269145497|gb|EEZ71915.1| ribosomal protein S3 [Neisseria cinerea ATCC 14685]
gi|298281195|gb|EFI22685.1| ribosomal protein S3 [Neisseria sp. oral taxon 014 str. F0314]
Length = 231
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 112/224 (50%), Positives = 159/224 (70%), Gaps = 2/224 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRL V W S+WFA+ +++ A+L +D+ +R YL+ L A V +++IER
Sbjct: 1 MGQKINPTGFRLAVTKDWASKWFAKSTDFSAVLKQDIDVRNYLRKKLANASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ RI ++SARPG++IGKKG DIE +++ L + +H+++ E+ KPE++A +IA I
Sbjct: 61 AKSARITIHSARPGVVIGKKGEDIEVLKRDLQALMGVPVHVNIEEIRKPELDAQIIADGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+RV FRRAMKRA+Q+AMR GA G+K++ SGRLNGA+++R+E Y EGRVPL TLRA
Sbjct: 121 AQQLEKRVQFRRAMKRAMQNAMRSGAKGIKIMTSGRLNGADIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
++DY T+ A T YG G+KV+V V S P E + +
Sbjct: 181 NVDYATSEAHTTYGVLGLKVWVYTEGNV--KTSAKPEHEKKQRK 222
>gi|319938501|ref|ZP_08012895.1| 30S ribosomal protein S3 [Coprobacillus sp. 29_1]
gi|319806417|gb|EFW03084.1| 30S ribosomal protein S3 [Coprobacillus sp. 29_1]
Length = 217
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 100/214 (46%), Positives = 145/214 (67%), Gaps = 1/214 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ R+GVN WNSRW+A ++ +LLHED++IRE+L LK A VA I IER+
Sbjct: 1 MGQKVSPVGLRVGVNRDWNSRWYANDKDFASLLHEDIRIREFLNAKLKGAYVANIEIERS 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119
I V+++RPG++IGK G ++ +RK+++ + ++ +++ E+ P++ A L+A
Sbjct: 61 KNRVNIFVHTSRPGVVIGKDGEAVDALRKQVTKLVKDKQVFINIVEIKNPDVVAQLVANR 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA+QLE R FR KRA+QSAMR GA G+K SGRL GA+++RTE Y EG VPL TLR
Sbjct: 121 IAEQLENRASFRTVQKRAIQSAMRAGAKGIKTCVSGRLGGADMARTEGYSEGNVPLHTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
A IDY TA A+T YG G+KV++ + +
Sbjct: 181 ADIDYATAEADTTYGKLGVKVWICKGEILPAKKK 214
>gi|242278664|ref|YP_002990793.1| 30S ribosomal protein S3 [Desulfovibrio salexigens DSM 2638]
gi|259495241|sp|C6C191|RS3_DESAD RecName: Full=30S ribosomal protein S3
gi|242121558|gb|ACS79254.1| ribosomal protein S3 [Desulfovibrio salexigens DSM 2638]
Length = 213
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 114/212 (53%), Positives = 153/212 (72%), Gaps = 2/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG W SRWF+ +Y A ++ED IR+Y++ + AGV+KI IER
Sbjct: 1 MGQKVHPYGFRLGYTKNWLSRWFS-SKDYPAFVYEDDSIRKYVKEKIFHAGVSKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+I+++ARPG+IIG+KG +IEK+R+ L N E L V+E+ +PE +A L+A++I
Sbjct: 60 GGKIRLIIHTARPGIIIGRKGVEIEKLREDLRRKFNKEFALEVSEIRRPETDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKR V A +FGA+G+KV +GRL GAE++RTE Y +GRVPLQTLRA
Sbjct: 120 AQQLERRVAFRRAMKRIVGLARKFGAEGIKVACAGRLAGAEIARTEWYRDGRVPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
IDYG A A T YG GIKV++ + E+ D +
Sbjct: 180 DIDYGVARANTTYGVIGIKVWIF-KGEILDHE 210
>gi|182436621|ref|YP_001824340.1| 30S ribosomal protein S3 [Streptomyces griseus subsp. griseus NBRC
13350]
gi|239943583|ref|ZP_04695520.1| 30S ribosomal protein S3 [Streptomyces roseosporus NRRL 15998]
gi|239990036|ref|ZP_04710700.1| 30S ribosomal protein S3 [Streptomyces roseosporus NRRL 11379]
gi|291447050|ref|ZP_06586440.1| 30S ribosomal protein S3 [Streptomyces roseosporus NRRL 15998]
gi|326777243|ref|ZP_08236508.1| ribosomal protein S3 [Streptomyces cf. griseus XylebKG-1]
gi|226697762|sp|B1W401|RS3_STRGG RecName: Full=30S ribosomal protein S3
gi|178465137|dbj|BAG19657.1| putative 30S ribosomal protein S3 [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|291349997|gb|EFE76901.1| 30S ribosomal protein S3 [Streptomyces roseosporus NRRL 15998]
gi|326657576|gb|EGE42422.1| ribosomal protein S3 [Streptomyces cf. griseus XylebKG-1]
Length = 276
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 96/227 (42%), Positives = 154/227 (67%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FRLG+ + SRW+A Y + ED+ IR + +++AG++K+ IERT
Sbjct: 1 MGQKVNPHGFRLGITTDFKSRWYAD-KLYKDYVKEDVAIRRMMTKGMERAGISKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV PE++A L+AQ++
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQVQLNILEVKNPEVDAQLVAQAV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++++QS+M+ GA G+K+ GRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLSSRVSFRRAMRKSMQSSMKAGAKGIKIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
++DYG A+T +G G+KV++ D + ++ A R + +
Sbjct: 180 NVDYGFFEAKTTFGRIGVKVWIYKGDVKNIAEVRAENAAARAGNRPA 226
>gi|296392591|ref|YP_003657475.1| 30S ribosomal protein S3 [Segniliparus rotundus DSM 44985]
gi|296179738|gb|ADG96644.1| ribosomal protein S3 [Segniliparus rotundus DSM 44985]
Length = 282
Score = 253 bits (646), Expect = 2e-65, Method: Composition-based stats.
Identities = 101/212 (47%), Positives = 145/212 (68%), Gaps = 2/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRLG+ W SRWFA +Y + ED++IR+ L +++AG+AK+ IERT
Sbjct: 1 MGQKIHPHGFRLGITTDWRSRWFAD-KQYKDYIKEDIQIRKLLVSGMERAGIAKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV E A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGQLEKLTGKQVQLNILEVKNSETIAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGA-DGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAMR G+KV+ GRL GAE+SR+E Y EGRVPL TLR
Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRHQQVKGIKVMCGGRLGGAEMSRSEYYREGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
A IDYG A+T +G G+KV++ D V
Sbjct: 180 ADIDYGFHEAKTTFGRIGVKVWIYKGDIVGGR 211
>gi|260905715|ref|ZP_05914037.1| 30S ribosomal protein S3 [Brevibacterium linens BL2]
Length = 273
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 102/210 (48%), Positives = 146/210 (69%), Gaps = 4/210 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQKINP FRLG+ S+WFA G Y + ED+KIR+ + L++AG++K+
Sbjct: 1 MGQKINPNGFRLGITTDHKSKWFADSTKPGQRYSDYVLEDVKIRQMMTKGLERAGISKVN 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + ++IR +L +T +I L++ EV EI+A L+
Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRIRGQLEKLTGKQIQLNILEVKNAEIDAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ +A+QL RV FRRAM++++QSA R GA G++V SGRL GAE+SR+E Y EGRVPL
Sbjct: 121 AQGVAEQLASRVAFRRAMRKSIQSAQRAGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
TLRA+IDYG A T +G G+KV++ D
Sbjct: 181 TLRANIDYGFHEAHTTFGRIGVKVWIYKGD 210
>gi|328884432|emb|CCA57671.1| SSU ribosomal protein S3p [Streptomyces venezuelae ATCC 10712]
Length = 279
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 95/227 (41%), Positives = 151/227 (66%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FRLG+ + SRW+A Y + ED+ IR + +++AG++K+ IERT
Sbjct: 1 MGQKVNPHGFRLGITTDFKSRWYAD-KLYKDYVKEDVAIRRMMTSGMERAGISKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PE++A L+AQ++
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPEMDAQLVAQAV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++++Q M+ GA G+K+ GRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLSSRVSFRRAMRKSMQGTMKAGAKGIKIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
++DYG A+T +G G+KV++ D + ++ A R + +
Sbjct: 180 NVDYGFFEAKTTFGRIGVKVWIYKGDVKNIAEVRAENAAARAGNRPA 226
>gi|311086240|gb|ADP66322.1| 30S ribosomal protein S3 [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
Length = 233
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 104/212 (49%), Positives = 152/212 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS WFA ++ L D K+R++L L++A +++I+IER
Sbjct: 1 MGQKVHPNGMRLGIIKKWNSVWFANTKDFADHLDSDYKVRQFLMKTLEKASISRIIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +Y+ARPG++IGKKG D+EK+R ++ +T + ++++EV KPE++A L++ SI
Sbjct: 61 AKSIRVTIYTARPGIVIGKKGEDVEKLRISIAKITGVPVQINISEVRKPELDAKLVSDSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV+FRRAMKR+VQ+AMR GA G+KV SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 TSQLERRVMFRRAMKRSVQNAMRQGAKGIKVEVSGRLGGAEIARREWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
+IDY + A T YG G+KV++ + + +
Sbjct: 181 NIDYSISEAHTTYGVIGVKVWIFKGEILGGME 212
>gi|219681864|ref|YP_002468250.1| 30S ribosomal protein S3 [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|257471569|ref|ZP_05635568.1| 30S ribosomal protein S3 [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|254764517|sp|B8D9U1|RS3_BUCA5 RecName: Full=30S ribosomal protein S3
gi|219624707|gb|ACL30862.1| 30S ribosomal protein S3 [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
Length = 233
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 104/212 (49%), Positives = 152/212 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS WFA ++ L D K+R++L L++A +++I+IER
Sbjct: 1 MGQKVHPNGMRLGIIKKWNSVWFANTKDFADHLDSDYKVRQFLMKTLEKASISRIIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +Y+ARPG++IGKKG D+EK+R ++ +T + ++++EV KPE++A L++ SI
Sbjct: 61 AKSIRVTIYTARPGIVIGKKGEDVEKLRISIAKITGVPVQINISEVRKPELDAKLVSDSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV+FRRAMKR+VQ+AMR GA G+KV SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 TSQLERRVMFRRAMKRSVQNAMRQGAKGIKVEVSGRLGGAEIARREWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
+IDY + A T YG G+KV++ + + +
Sbjct: 181 NIDYSISEAHTTYGVIGVKVWIFKGEILGGME 212
>gi|57650828|ref|YP_187043.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus COL]
gi|62287183|sp|Q5HDW4|RS3_STAAC RecName: Full=30S ribosomal protein S3
gi|57285014|gb|AAW37108.1| ribosomal protein S3 [Staphylococcus aureus subsp. aureus COL]
Length = 217
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 96/214 (44%), Positives = 150/214 (70%), Gaps = 1/214 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI R+G+ W ++W+A ++ +LLHEDLKIR+++ LK+A V+ + IER
Sbjct: 1 MGQKINPIGLRVGIIRDWEAKWYAE-KDFASLLHEDLKIRKFIDNELKEASVSHVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++ +PG++IGK G++IEK+R KL+ +T+ ++H++V E+ K +++A L+A++I
Sbjct: 60 ANRINIAIHTGKPGMVIGKGGSEIEKLRNKLNALTDKKVHINVIEIKKVDLDARLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R FRR K+A+ AM+ GA G+K SGRL GA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLENRASFRRVQKQAITRAMKLGAKGIKTQISGRLGGADIARAEQYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
IDY A A+T YG G+KV++ + + +++
Sbjct: 180 DIDYAHAEADTTYGKLGVKVWIYRGEVLPTKNTS 213
>gi|293402507|ref|ZP_06646642.1| ribosomal protein S3 [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291304021|gb|EFE45275.1| ribosomal protein S3 [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 264
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 104/221 (47%), Positives = 142/221 (64%), Gaps = 2/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+GV W SRW+A +Y LL ED+KIRE+L LK A V++I IER+
Sbjct: 1 MGQKVSPIGMRVGVIRDWESRWYAD-KDYADLLLEDVKIREFLFAELKAASVSRIEIERS 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119
I++ +ARPG+IIG G +IE ++KKL +T I++ V E+ P+++A L+A+S
Sbjct: 60 KNRVEIMIRTARPGVIIGTNGENIENLKKKLEKLTGGKNIYVKVLEIANPDLDARLVARS 119
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA QLE+R FR A K+A+Q MR GA G+K SGRL GA+++RTE Y EG VPL TLR
Sbjct: 120 IADQLEQRASFRTAQKKAIQRTMRAGAKGIKTAVSGRLGGADMARTEGYSEGVVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
A IDY A T YG G+KV++ + + P A
Sbjct: 180 ADIDYAWEEASTQYGRLGVKVWICRGEVLPGQMVQEPEAPK 220
>gi|298531079|ref|ZP_07018480.1| ribosomal protein S3 [Desulfonatronospira thiodismutans ASO3-1]
gi|298509102|gb|EFI33007.1| ribosomal protein S3 [Desulfonatronospira thiodismutans ASO3-1]
Length = 211
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 106/210 (50%), Positives = 147/210 (70%), Gaps = 1/210 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FR+G N W SRW+++ S Y + ED K+R YL+ L AG+++I +ER
Sbjct: 1 MGQKVHPYGFRVGYNKNWLSRWYSKTS-YPEFIIEDRKLRNYLKSKLYHAGISRIELERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
RII+Y++RPG++IG+KG +IE +R L +E + VNEV +PE +A L+A++I
Sbjct: 60 ADKVRIIIYTSRPGIVIGRKGAEIENLRSDLKKKFQNEFSIEVNEVRRPETDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV FRRAMKR+V A +FGA G+K+ +GRL GAE++RTE EGRVPL TLRA
Sbjct: 120 ALQLERRVAFRRAMKRSVSLAQKFGAQGIKISCAGRLGGAEIARTEWLREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210
IDYG A A T YG G+KV++ D +++
Sbjct: 180 DIDYGFAQARTTYGIIGVKVWIYKGDILNE 209
>gi|167767797|ref|ZP_02439850.1| hypothetical protein CLOSS21_02332 [Clostridium sp. SS2/1]
gi|317497089|ref|ZP_07955416.1| ribosomal protein S3 [Lachnospiraceae bacterium 5_1_63FAA]
gi|167710536|gb|EDS21115.1| hypothetical protein CLOSS21_02332 [Clostridium sp. SS2/1]
gi|291558866|emb|CBL37666.1| SSU ribosomal protein S3P [butyrate-producing bacterium SSC/2]
gi|316895634|gb|EFV17789.1| ribosomal protein S3 [Lachnospiraceae bacterium 5_1_63FAA]
Length = 216
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 101/213 (47%), Positives = 147/213 (69%), Gaps = 1/213 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+G+ W+SRW+A + + L ED KIR+Y++ L AG++KI IER
Sbjct: 1 MGQKVNPHGLRVGIIKDWDSRWYAEDA-FADNLVEDDKIRKYVKKRLYNAGISKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++IVY+A+PG++IGK G+ IE+++K L MT+ ++ + V EV +P+ +A L+A++I
Sbjct: 60 SDRVKLIVYTAKPGVVIGKGGSSIEELKKDLQKMTDKKLLIDVKEVKRPDKDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE R+ FRRAMK +Q MR GA G+K SGRL GA+++RTE Y EG +PLQTLRA
Sbjct: 120 AQQLENRISFRRAMKSCMQRTMRSGALGIKTSVSGRLGGADMARTEFYSEGTIPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
+IDYG A A+T YG G+K ++ + +
Sbjct: 180 NIDYGFAEADTTYGKVGVKTWIYHGEVLPSKKE 212
>gi|148655331|ref|YP_001275536.1| 30S ribosomal protein S3 [Roseiflexus sp. RS-1]
gi|189045329|sp|A5USI3|RS3_ROSS1 RecName: Full=30S ribosomal protein S3
gi|148567441|gb|ABQ89586.1| SSU ribosomal protein S3P [Roseiflexus sp. RS-1]
Length = 262
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 99/223 (44%), Positives = 145/223 (65%), Gaps = 1/223 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG+K++PI FRLG W S+WFA Y LLHED+ +R+ + L+ AGVA+I IER+
Sbjct: 1 MGRKVHPIGFRLGYIKDWQSKWFAE-RNYTELLHEDVMLRKIIAKELENAGVARIEIERS 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ VY+A+PG++IGK+G ++++R +L T ++ L++ E+ +PE+ A L+A+SI
Sbjct: 60 ANKVEVTVYTAKPGIVIGKRGAKVDELRAELEKRTGKKVKLNIQEIHQPELEAQLVAESI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+ +RV ++RAMK+AVQ AMR GA GVK+ SGRL GAE++R +GRVPL TLRA
Sbjct: 120 AEQINKRVSYKRAMKQAVQRAMRLGAQGVKIKCSGRLAGAEMARVAWERDGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223
IDY A T YG G+KV++ + D + V
Sbjct: 180 DIDYAQVHAHTTYGRIGVKVWIYKGEVFPDQKGQTQLPQPAVA 222
>gi|295838410|ref|ZP_06825343.1| ribosomal protein S3 [Streptomyces sp. SPB74]
gi|302519655|ref|ZP_07271997.1| ribosomal protein S3 [Streptomyces sp. SPB78]
gi|318058122|ref|ZP_07976845.1| 30S ribosomal protein S3 [Streptomyces sp. SA3_actG]
gi|318076025|ref|ZP_07983357.1| 30S ribosomal protein S3 [Streptomyces sp. SA3_actF]
gi|197695793|gb|EDY42726.1| ribosomal protein S3 [Streptomyces sp. SPB74]
gi|302428550|gb|EFL00366.1| ribosomal protein S3 [Streptomyces sp. SPB78]
Length = 277
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 96/227 (42%), Positives = 154/227 (67%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FRLG+ + SRW+A Y + ED+ IR + +++AG++K+ IERT
Sbjct: 1 MGQKVNPHGFRLGITTDFKSRWYAD-KLYKDYVKEDVAIRRMMTKGMERAGISKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV PE++A L+AQ++
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQVQLNILEVKNPEVDAQLVAQAV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++++QS+M+ GA G+K+ GRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLSSRVSFRRAMRKSMQSSMKAGAKGIKIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
++DYG A+T +G G+KV++ D + ++ A R + +
Sbjct: 180 NVDYGFFEAKTTFGRIGVKVWIYKGDVKNIAEVRAENAAARAGNRPA 226
>gi|295692166|ref|YP_003600776.1| 30S ribosomal protein s3 [Lactobacillus crispatus ST1]
gi|295030272|emb|CBL49751.1| 30S ribosomal protein S3 [Lactobacillus crispatus ST1]
Length = 224
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 101/225 (44%), Positives = 152/225 (67%), Gaps = 1/225 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLGV W S+W+A Y L+EDL+IR+++ LK A V+ + IER
Sbjct: 1 MGQKINPNGFRLGVIRDWESKWYAD-KGYKETLNEDLQIRKFISEKLKDASVSTVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK G+++E +RK+L+ +T ++H+++ E+ KP+++A L+A SI
Sbjct: 60 ANRINISIHTAKPGMVIGKGGSEVEALRKQLNALTGKQVHINIVEIKKPDLDAKLVADSI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRAM++A Q AMR GA G+KV SGRLNGA+++R E + EGRVPLQTLRA
Sbjct: 120 ARQLEARIAFRRAMRQATQRAMRAGAKGIKVQTSGRLNGADMARREWHTEGRVPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY A T YG G++V+++ + + + + +
Sbjct: 180 DIDYAWVNAFTTYGEIGVQVWINRGEILPTRKDKPASKPAKGGNR 224
>gi|289550149|ref|YP_003471053.1| SSU ribosomal protein S3p (S3e) [Staphylococcus lugdunensis
HKU09-01]
gi|315659221|ref|ZP_07912085.1| 30S ribosomal protein S3 [Staphylococcus lugdunensis M23590]
gi|289179681|gb|ADC86926.1| SSU ribosomal protein S3p (S3e) [Staphylococcus lugdunensis
HKU09-01]
gi|315495646|gb|EFU83977.1| 30S ribosomal protein S3 [Staphylococcus lugdunensis M23590]
Length = 217
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 98/214 (45%), Positives = 151/214 (70%), Gaps = 1/214 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI R+G+ W ++W+A ++ +LLHEDLKIR+++ LK+A V+ + IER
Sbjct: 1 MGQKINPIGLRVGIIRDWEAKWYAE-KDFASLLHEDLKIRKFIDNELKEASVSHVDIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++ +PG++IGK G++IEK+R KL+N+T+ ++H++V E+ K +I+A L+A++I
Sbjct: 60 ANRINIAIHTGKPGMVIGKGGSEIEKLRNKLNNLTDKKVHINVVEIKKIDIDARLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R FRR K+A+ AM+ GA G+K SGRL GA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLENRASFRRVQKQAISRAMKLGAKGIKTQVSGRLGGADIARAEQYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
IDY A A+T YG G+KV++ + + +++
Sbjct: 180 DIDYAHAEADTTYGKLGVKVWIYRGEVLPTKNTS 213
>gi|239980050|ref|ZP_04702574.1| 30S ribosomal protein S3 [Streptomyces albus J1074]
gi|291451907|ref|ZP_06591297.1| 30S ribosomal protein S3 [Streptomyces albus J1074]
gi|291354856|gb|EFE81758.1| 30S ribosomal protein S3 [Streptomyces albus J1074]
Length = 276
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 97/227 (42%), Positives = 153/227 (67%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FRLGV + SRW+A Y + ED+ IR + +++AG++K+ IERT
Sbjct: 1 MGQKVNPHGFRLGVTTDFKSRWYAD-KLYKDYVKEDVAIRRMMTKGMERAGISKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV PE +A L+AQ++
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQVQLNILEVKNPETDAQLVAQAV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++++QS+M+ GA G+K+ GRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLSSRVSFRRAMRKSMQSSMKAGAKGIKIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
++DYG A+T +G G+KV++ D + ++ A R + +
Sbjct: 180 NVDYGFFEAKTTFGRIGVKVWIYKGDVKNIAEVRAENAAARAGNRPA 226
>gi|160941063|ref|ZP_02088401.1| hypothetical protein CLOBOL_05956 [Clostridium bolteae ATCC
BAA-613]
gi|158436012|gb|EDP13779.1| hypothetical protein CLOBOL_05956 [Clostridium bolteae ATCC
BAA-613]
Length = 218
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 95/211 (45%), Positives = 147/211 (69%), Gaps = 1/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+S+W+A +++ L ED +R++L+ L AG++KI IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAE-ADFADCLVEDYNMRKFLKKRLFSAGISKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+II+Y+A+PG++IGK G++IEK++K++ +T+ ++ + + E+ +P+ +A L+A+SI
Sbjct: 60 SDRVKIIIYTAKPGVVIGKGGSEIEKLKKEVQKLTDKKLFIDIKEIKRPDRDAQLVAESI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE RV FRRAMK + M+ G G+K +GRL GA+++RTE Y EG +PLQTLRA
Sbjct: 120 AQQLENRVSFRRAMKSTMGRTMKAGVKGIKTAVAGRLGGADMARTEFYSEGTIPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYG A A+T YG G+KV++ + +
Sbjct: 180 DIDYGFAEADTTYGKIGVKVWIYKGEVLPTK 210
>gi|302388082|ref|YP_003823904.1| ribosomal protein S3 [Clostridium saccharolyticum WM1]
gi|302198710|gb|ADL06281.1| ribosomal protein S3 [Clostridium saccharolyticum WM1]
Length = 218
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 91/211 (43%), Positives = 145/211 (68%), Gaps = 1/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV WNS+W+A +++ L ED IR++L+ L AG++ I IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWNSKWYAE-ADFADNLVEDYAIRKFLKKRLYSAGISDIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ +++A+PG++IGK G++IEK++ ++ +T+ ++ + + E+ +P+ +A L+A+SI
Sbjct: 60 SDRVKVTIHTAKPGVVIGKGGSEIEKLKVEVQKLTDKKLFVDIKEIKRPDRDAQLVAESI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE RV FRRAMK + +M+ G G+K +GRL GA+++RTE Y EG +PLQTLRA
Sbjct: 120 AQQLENRVSFRRAMKSTMGRSMKAGVKGIKTAVAGRLGGADMARTEFYSEGTIPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYG A A+T +G G+KV++ + +
Sbjct: 180 DIDYGFAEADTTFGKIGVKVWIYNGEILPTK 210
>gi|256825880|ref|YP_003149840.1| 30S ribosomal protein S3P [Kytococcus sedentarius DSM 20547]
gi|256689273|gb|ACV07075.1| SSU ribosomal protein S3P [Kytococcus sedentarius DSM 20547]
Length = 276
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 105/222 (47%), Positives = 147/222 (66%), Gaps = 5/222 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQKINP FRLG+ SRWFA G Y + ED+ IR+ L +++AG+AK+
Sbjct: 1 MGQKINPHGFRLGITTDHKSRWFADSSAEGQRYADFVGEDVAIRKLLSSGMERAGIAKVE 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + +++R +L +T ++ L++ EV PE A L+
Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRLRGQLEKLTGKQVQLNILEVKNPEAVAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ IA+QL RV RRAMK+ +QSA R GA G++V SGRL GAE+SRTE Y EGRVPL
Sbjct: 121 AQGIAEQLSARVSTRRAMKKGIQSAQRAGAKGIRVQCSGRLGGAEMSRTEFYREGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
TLRA+IDYG A T +G G+KV++ D ++D + A
Sbjct: 181 TLRANIDYGFYEARTTFGRIGVKVWIYQGD-MTDKELAREQA 221
>gi|227549832|ref|ZP_03979881.1| 30S ribosomal protein S3 [Corynebacterium lipophiloflavum DSM
44291]
gi|227078087|gb|EEI16050.1| 30S ribosomal protein S3 [Corynebacterium lipophiloflavum DSM
44291]
Length = 249
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 98/215 (45%), Positives = 144/215 (66%), Gaps = 2/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P RLG+ W + W+A Y + ED+KIRE+L L +AG+A ++IERT
Sbjct: 1 MGQKIHPHGLRLGITADWKTHWYAD-KNYADYVAEDIKIREFLSKGLDRAGIADVVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR++L +T + L++ EV + NA L+AQS+
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRRELEKLTGKMVALNILEVKNVDANAALVAQSV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QS+M G+K++ SGRL GAE++R E Y EGRVPL TLR
Sbjct: 120 AEQLVNRVAFRRAMRKAIQSSMRNPQVKGIKIMTSGRLGGAEIARVERYHEGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
A IDYG A A T +G G+KV++ D V +
Sbjct: 180 AEIDYGIAEAHTTFGVIGVKVWIYKGDVVGGVRES 214
>gi|42518435|ref|NP_964365.1| 30S ribosomal protein S3 [Lactobacillus johnsonii NCC 533]
gi|61215654|sp|Q74L83|RS3_LACJO RecName: Full=30S ribosomal protein S3
gi|41582720|gb|AAS08331.1| 30S ribosomal protein S3 [Lactobacillus johnsonii NCC 533]
Length = 222
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 98/221 (44%), Positives = 148/221 (66%), Gaps = 2/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLGVN W ++W+A Y L+EDL+IR+++ L A V+ + IER
Sbjct: 1 MGQKINPNGFRLGVNRDWEAKWYAD-KNYADTLNEDLRIRKFISEKLADASVSTVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK G ++E +RK+LS +TN +H+++ E+ KP+++A L+ + I
Sbjct: 60 ANRINISIHTAKPGMVIGKGGKEVEALRKELSALTNKNVHINIVEIKKPDLDAKLVGEGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRA ++A Q +MR GA G+KV +GRLNGA+++R E + EG VPL TLRA
Sbjct: 120 ARQLEARIAFRRATRQATQRSMRSGAKGIKVQTAGRLNGADMARREWHTEGSVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
IDY A T YG G+KV+++ E+ P+ + +
Sbjct: 180 DIDYAWVEAATTYGQIGVKVWINRG-EILPQRKNKPSKKAK 219
>gi|283853159|ref|ZP_06370412.1| ribosomal protein S3 [Desulfovibrio sp. FW1012B]
gi|283571417|gb|EFC19424.1| ribosomal protein S3 [Desulfovibrio sp. FW1012B]
Length = 213
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 109/215 (50%), Positives = 156/215 (72%), Gaps = 2/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG N W SRWF+ +Y A + ED +IR++++ +L AG++KI IER
Sbjct: 1 MGQKVHPYGFRLGYNKNWLSRWFS-KKDYPAFVFEDNQIRKFVKKNLYHAGISKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+I+++ARPG++IG+KGT+IEK+R L E + VNE+ +PEI++ L+A++I
Sbjct: 60 GGKIRLIIHTARPGIVIGRKGTEIEKVRGDLKQRFGREFTVEVNEIRRPEIDSQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV FRRAMKR V + +FGA+G+KV +GRL GAE++R+E Y +GRVPLQTLRA
Sbjct: 120 ALQLERRVAFRRAMKRTVGLSRKFGAEGIKVSCAGRLAGAEIARSEWYRDGRVPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDYG A+A+T YG G+KV++ + E+ D +
Sbjct: 180 DIDYGYAIAKTTYGVIGVKVWIF-KGEILDHEVEA 213
>gi|18311381|ref|NP_563315.1| 30S ribosomal protein S3 [Clostridium perfringens str. 13]
gi|110800643|ref|YP_697088.1| 30S ribosomal protein S3 [Clostridium perfringens ATCC 13124]
gi|110803016|ref|YP_699657.1| 30S ribosomal protein S3 [Clostridium perfringens SM101]
gi|168205228|ref|ZP_02631233.1| ribosomal protein S3 [Clostridium perfringens E str. JGS1987]
gi|168211899|ref|ZP_02637524.1| ribosomal protein S3 [Clostridium perfringens B str. ATCC 3626]
gi|168215182|ref|ZP_02640807.1| ribosomal protein S3 [Clostridium perfringens CPE str. F4969]
gi|168216637|ref|ZP_02642262.1| ribosomal protein S3 [Clostridium perfringens NCTC 8239]
gi|169347113|ref|ZP_02866055.1| ribosomal protein S3 [Clostridium perfringens C str. JGS1495]
gi|182626920|ref|ZP_02954653.1| ribosomal protein S3 [Clostridium perfringens D str. JGS1721]
gi|27734515|sp|Q8XHS9|RS3_CLOPE RecName: Full=30S ribosomal protein S3
gi|122958674|sp|Q0TMQ2|RS3_CLOP1 RecName: Full=30S ribosomal protein S3
gi|123047161|sp|Q0SQF0|RS3_CLOPS RecName: Full=30S ribosomal protein S3
gi|18146065|dbj|BAB82105.1| 30S ribosomal protein S3 [Clostridium perfringens str. 13]
gi|110675290|gb|ABG84277.1| 30S ribosomal protein S3 [Clostridium perfringens ATCC 13124]
gi|110683517|gb|ABG86887.1| 30S ribosomal protein S3 [Clostridium perfringens SM101]
gi|169296796|gb|EDS78925.1| ribosomal protein S3 [Clostridium perfringens C str. JGS1495]
gi|170663255|gb|EDT15938.1| ribosomal protein S3 [Clostridium perfringens E str. JGS1987]
gi|170710163|gb|EDT22345.1| ribosomal protein S3 [Clostridium perfringens B str. ATCC 3626]
gi|170713391|gb|EDT25573.1| ribosomal protein S3 [Clostridium perfringens CPE str. F4969]
gi|177907710|gb|EDT70325.1| ribosomal protein S3 [Clostridium perfringens D str. JGS1721]
gi|182381145|gb|EDT78624.1| ribosomal protein S3 [Clostridium perfringens NCTC 8239]
Length = 222
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 96/219 (43%), Positives = 144/219 (65%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+GV W+++W+A + L ED +IR++++ L AG+AKI IER+
Sbjct: 1 MGQKVHPHGLRVGVIKDWDAKWYADKKNFADNLIEDQQIRKFIKKELFSAGIAKIEIERS 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT-NSEIHLSVNEVPKPEINATLIAQS 119
K ++ +++A+PG+IIGK G+ IE+++ L N+ + +++ EV E NA L+A++
Sbjct: 61 AKRVKLNIHTAKPGVIIGKGGSGIERLKASLKNIIAEKNVLINIVEVKNAETNAQLMAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA QLE+R+ FRRAMK+ +Q AM+ G GVK SGRL GAE++RTE Y EG +PLQT+R
Sbjct: 121 IAAQLEKRISFRRAMKQTIQRAMKAGTLGVKTACSGRLGGAEIARTEQYNEGTIPLQTIR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
A IDYG A A+T YG G+KV+V + +
Sbjct: 181 ADIDYGFAEADTTYGKIGVKVWVYNGEVLPTKKVEKKEE 219
>gi|15896377|ref|NP_349726.1| 30S ribosomal protein S3 [Clostridium acetobutylicum ATCC 824]
gi|27734526|sp|Q97EI4|RS3_CLOAB RecName: Full=30S ribosomal protein S3
gi|15026193|gb|AAK81066.1|AE007808_19 Ribosomal protein S3 [Clostridium acetobutylicum ATCC 824]
gi|325510533|gb|ADZ22169.1| 30S ribosomal protein S3 [Clostridium acetobutylicum EA 2018]
Length = 222
Score = 252 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 100/219 (45%), Positives = 145/219 (66%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV WN++W+A + + L +D KIR++++ L AGV++I IER
Sbjct: 1 MGQKVNPHGLRVGVIKEWNAKWYANSKNFSSYLVQDNKIRKFVKNKLSSAGVSRIEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS-EIHLSVNEVPKPEINATLIAQS 119
K ++ +++A+PG++IGK G IE ++K L N + + +++ EV + NA L+A++
Sbjct: 61 AKRVKLNIHTAKPGMVIGKGGQGIEALKKDLVNFVDKENVLINIVEVKNSDANAQLMAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IAQQLERR+ FRRAMK+ +Q AMR GA GVK +GRL GAE++RTE Y EG +PLQTLR
Sbjct: 121 IAQQLERRISFRRAMKQTIQRAMRTGAKGVKTACAGRLAGAEIARTEQYHEGTIPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
A IDYG A A+T YG G+KV+V + +
Sbjct: 181 ADIDYGFAEADTTYGKIGVKVWVYNGEILPTKKIEKKEE 219
>gi|301168452|emb|CBW28042.1| 30S ribosomal protein S3 [Bacteriovorax marinus SJ]
Length = 208
Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats.
Identities = 102/207 (49%), Positives = 138/207 (66%), Gaps = 1/207 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG W S W+A+ Y L EDL IR Y++ ++K A VAK I RT
Sbjct: 1 MGQKVHPYGFRLGYIKGWQSNWYAKD-NYAQQLKEDLAIRNYVEKNMKNAAVAKTDISRT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ VY+A+PG+ IGKKG IEKIR+ L +T + ++ EV +P+ ++ LIA++I
Sbjct: 60 SDQIKVTVYTAKPGVAIGKKGAGIEKIREDLKKLTKGTLIFNIAEVKRPDADSKLIAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV FRRAMK+ +QSA R G G++V +GRL GAE++R E Y E +VPL TLRA
Sbjct: 120 ASQLEKRVAFRRAMKKVMQSAFRAGVKGIRVRTAGRLGGAEMARAEGYSERKVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207
IDY TA A T YG G+KV+V +
Sbjct: 180 DIDYSTAEAHTTYGVIGVKVWVYKGEV 206
>gi|251772496|gb|EES53062.1| ribosomal protein S3 [Leptospirillum ferrodiazotrophum]
Length = 229
Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats.
Identities = 119/230 (51%), Positives = 170/230 (73%), Gaps = 4/230 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG TWNSRW+A Y LHEDL+IR+Y++ L QAG+++I IERT
Sbjct: 1 MGQKVHPTGFRLGYIKTWNSRWYA-KKSYVEWLHEDLQIRKYIKKKLYQAGISRIDIERT 59
Query: 61 HKN--CRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118
K+ R++++SA+PGLIIGKKG++IEK++ L+ SE+ +S+ EV KPE++A L+A+
Sbjct: 60 GKDSITRVLIHSAKPGLIIGKKGSEIEKLKSDLAKSIKSELSISIKEVKKPEVDAQLVAE 119
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
SIA QLE+R+ FRRAMK++V SA+RFGA GVK+ +GRL GAE++RTE Y EGRVPLQT+
Sbjct: 120 SIASQLEKRISFRRAMKKSVASALRFGALGVKICCAGRLGGAEIARTEWYREGRVPLQTI 179
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS-DSTIPAAEHRVVEKDS 227
RA ID G A + T +G GIKV+V + D + + ++++ AA + + +
Sbjct: 180 RADIDLGLAESYTTFGKIGIKVWVYMGDHLPSNPEASLDAASDKSRKVKA 229
>gi|227494551|ref|ZP_03924867.1| ribosomal protein S3 [Actinomyces coleocanis DSM 15436]
gi|226832285|gb|EEH64668.1| ribosomal protein S3 [Actinomyces coleocanis DSM 15436]
Length = 271
Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats.
Identities = 107/211 (50%), Positives = 147/211 (69%), Gaps = 4/211 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQK+NP FRLG+ SRWFA G Y + ED+ IR+ L L++AGVA+I
Sbjct: 1 MGQKVNPTGFRLGITTEHRSRWFADSTTKGQRYSDYVAEDVAIRKLLNETLERAGVARIQ 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +Y+ARPG++IG++G + +++R +L +T ++ L + EV PE++A L+
Sbjct: 61 IERTTDRVRVDLYAARPGIVIGRRGAEADRLRVQLEKLTGKQVQLKIIEVKNPELDAKLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ IA+QL RV FRRAM++A+QSAMR GA G++V SGRL GAE+SR E Y EGRVPL
Sbjct: 121 AQGIAEQLGARVSFRRAMRKAMQSAMRAGAKGIRVQCSGRLGGAEMSRAEFYREGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
TLRA+IDYGT A+T +G G+KV++ D
Sbjct: 181 TLRANIDYGTFEAKTTFGRIGVKVWIYKGDV 211
>gi|221140154|ref|ZP_03564647.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|302752117|gb|ADL66294.1| 30S ribosomal protein S3 [Staphylococcus aureus subsp. aureus str.
JKD6008]
Length = 217
Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats.
Identities = 96/214 (44%), Positives = 150/214 (70%), Gaps = 1/214 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI R+G+ W ++W+A ++ +LLHEDLKIR+++ LK+A V+ + IER
Sbjct: 1 MGQKINPIGLRVGIIRDWEAKWYAE-KDFASLLHEDLKIRKFIDNELKEASVSHVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++ +PG++IGK G++IEK+R KL+ +T+ ++H++V E+ K +++A L+A++I
Sbjct: 60 ANRINIAIHTGKPGMVIGKGGSEIEKLRNKLNVLTDKKVHINVIEIKKVDLDARLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R FRR K+A+ AM+ GA G+K SGRL GA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLENRASFRRVQKQAITRAMKLGAKGIKTQVSGRLGGADIARAEQYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
IDY A A+T YG G+KV++ + + +++
Sbjct: 180 DIDYAHAEADTTYGKLGVKVWIYRGEVLPTKNTS 213
>gi|42524369|ref|NP_969749.1| 30S ribosomal protein S3 [Bdellovibrio bacteriovorus HD100]
gi|61215579|sp|Q6MJ20|RS3_BDEBA RecName: Full=30S ribosomal protein S3
gi|39576578|emb|CAE80742.1| 30S ribosomal protein S3 [Bdellovibrio bacteriovorus HD100]
Length = 221
Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats.
Identities = 107/212 (50%), Positives = 162/212 (76%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI R+GV TW+SRW+A+G +Y LHED+++R++L+ LK AGVAKI +ER
Sbjct: 1 MGQKVNPIGLRVGVIRTWDSRWYAKGQQYYENLHEDIRLRKFLKDKLKNAGVAKIEMERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K +II+ +ARPG++IGKKG+ I+ ++ ++ +T +E+ LS+ EV KP+++A L+A+SI
Sbjct: 61 AKKIKIIISTARPGVVIGKKGSGIDALKAEVQKLTPNEVFLSIQEVRKPDLDAQLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+R+ +RRA+K+++ +A++ G G+K+ SGRL+GAE++R+E Y E VPL TLRA
Sbjct: 121 AQQLEKRISWRRALKKSIAAAIKGGVRGIKIRVSGRLDGAEIARSEWYNEKSVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
IDYGTA + TAYG G+KV++ D +S +
Sbjct: 181 DIDYGTAESLTAYGIIGLKVWIYKGDILSARE 212
>gi|158319549|ref|YP_001512056.1| ribosomal protein S3 [Alkaliphilus oremlandii OhILAs]
gi|189044984|sp|A8MLE6|RS3_ALKOO RecName: Full=30S ribosomal protein S3
gi|158139748|gb|ABW18060.1| ribosomal protein S3 [Alkaliphilus oremlandii OhILAs]
Length = 238
Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats.
Identities = 100/227 (44%), Positives = 152/227 (66%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+G+ W+++W+A ++G LL ED +IR++++ L +GV++I IER
Sbjct: 1 MGQKVNPHGLRVGIIKDWDTKWYANKRDFGDLLVEDNEIRKFVKKKLFLSGVSRIEIERA 60
Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
N ++ V++A+PG++IGK G +E +RK + ++ + ++V EV +PE +A L+A++
Sbjct: 61 ANNKVKVNVHTAKPGMVIGKGGQGVEDLRKDIEKISKKNVAVNVIEVKRPETDAQLVAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
+A QLERRV FRRAMK+ +Q AM+ GA G+KV SGRL GAE++RTE Y +G VPLQTLR
Sbjct: 121 VAFQLERRVSFRRAMKQVMQRAMKSGAKGIKVATSGRLGGAEMARTEGYSQGNVPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
A I+YG A A+T YG GIKV++ + + E V +
Sbjct: 181 ADINYGFAEADTTYGKLGIKVWIYKGEVLPTKGRVASNNEEVVGNVE 227
>gi|302876528|ref|YP_003845161.1| 30S ribosomal protein S3 [Clostridium cellulovorans 743B]
gi|307687201|ref|ZP_07629647.1| 30S ribosomal protein S3 [Clostridium cellulovorans 743B]
gi|302579385|gb|ADL53397.1| ribosomal protein S3 [Clostridium cellulovorans 743B]
Length = 223
Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats.
Identities = 99/219 (45%), Positives = 144/219 (65%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+++WFA E+ L ED KIR++++ L +G++KI IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDAKWFADKKEFANYLVEDNKIRDFVKTKLYNSGISKIEIERK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT-NSEIHLSVNEVPKPEINATLIAQS 119
K ++ +Y+A+PG+IIG+ G IE ++K L ++ + I +++ E+ E +A L+A+S
Sbjct: 61 AKRVKLNIYTAKPGMIIGRGGQGIEALKKDLLKISADKNILINIVEIKNAETDAQLMAES 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IAQQLE+R+ FRRAMK+ +Q AM+ G GVK +GRL GAE++RTE Y EG +PLQTLR
Sbjct: 121 IAQQLEKRISFRRAMKQTIQRAMKQGVRGVKTACAGRLAGAEIARTEQYHEGTIPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
A IDYG A A T YG G+KV+V + +
Sbjct: 181 ADIDYGFAEANTTYGKIGVKVWVYKGEVLPTKKVKNEEE 219
>gi|285017326|ref|YP_003375037.1| 30s ribosomal protein s3 [Xanthomonas albilineans GPE PC73]
gi|283472544|emb|CBA15049.1| probable 30s ribosomal protein s3 [Xanthomonas albilineans]
Length = 241
Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats.
Identities = 116/208 (55%), Positives = 156/208 (75%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+NP+ RLG++ WNS+W+A E+ L DLK+RE L+ L QAG++KILIER
Sbjct: 1 MGHKVNPVGIRLGISKDWNSKWYANKGEFAGYLAADLKVREMLRKKLAQAGISKILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ +Y+ARPG++IGK+G DIEK+RK++S M H++V EV KPE++A L+A+SI
Sbjct: 61 AKTARVTIYTARPGVVIGKRGEDIEKLRKEVSEMMGVPAHINVTEVRKPELDAQLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERR++FRRAMKR+V +AMR GA G+KV SGRLNGAE++R+E Y EGRVPL TLRA
Sbjct: 121 AQQLERRIMFRRAMKRSVGNAMRLGALGIKVSVSGRLNGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
I YG A A T YG+ G++V ++ +
Sbjct: 181 DIGYGFAEANTTYGTIGVQVTINNGEIF 208
>gi|323483295|ref|ZP_08088685.1| hypothetical protein HMPREF9474_00434 [Clostridium symbiosum
WAL-14163]
gi|323691207|ref|ZP_08105483.1| ribosomal protein S3 [Clostridium symbiosum WAL-14673]
gi|323403393|gb|EGA95701.1| hypothetical protein HMPREF9474_00434 [Clostridium symbiosum
WAL-14163]
gi|323504726|gb|EGB20512.1| ribosomal protein S3 [Clostridium symbiosum WAL-14673]
Length = 218
Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats.
Identities = 98/211 (46%), Positives = 146/211 (69%), Gaps = 1/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+S+W+A +++ L ED KIR YL+ L AG++KI IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAE-ADFADNLVEDHKIRTYLKKKLYSAGISKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++Y+A+PG++IGK G +IEK +K++ +T+ + + + EV + + +A L+A++I
Sbjct: 60 SDKVKIVIYTAKPGVVIGKGGAEIEKTKKEIQKLTDKRVFVDIKEVKRADRDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQL+ RV FRRAMK A+ +M+ GA G+K SGRL GA+++RTE Y EG +PLQTLRA
Sbjct: 120 AQQLQNRVSFRRAMKSAMGRSMKAGAKGIKASVSGRLGGADMARTEFYSEGTIPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYG A A+T YG G+KV++ + +
Sbjct: 180 DIDYGFAEADTTYGKTGVKVWIYKGEVLPAK 210
>gi|257454053|ref|ZP_05619327.1| ribosomal protein S3 [Enhydrobacter aerosaccus SK60]
gi|257448531|gb|EEV23500.1| ribosomal protein S3 [Enhydrobacter aerosaccus SK60]
Length = 250
Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats.
Identities = 106/225 (47%), Positives = 150/225 (66%), Gaps = 1/225 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI RLGV N+ W+A +Y L DL++R+YL+ LK A ++ I IER
Sbjct: 1 MGQKVHPIGIRLGVIRKSNANWYADPKKYSEYLINDLQVRKYLEKKLKAAMISGISIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I + +ARPG+IIGKKG DIE ++K+L+ + +S+ E+ +P+++A L+A I
Sbjct: 61 TGAAKITIATARPGIIIGKKGEDIESLQKELTKLMGVPAQVSIEEITQPDLDARLVADGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRAMKRAVQ++M+ GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNSMKAGAQGIKVELSGRLGGAEIARSEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-SDSTIPAAEHRVVE 224
IDY AET YG+ G+KV++ + + + P E +
Sbjct: 181 DIDYSNVRAETTYGTIGVKVWIFRGEVLDGMNRVYNPVKEEKQAR 225
>gi|239918193|ref|YP_002957751.1| SSU ribosomal protein S3P [Micrococcus luteus NCTC 2665]
gi|281415616|ref|ZP_06247358.1| 30S ribosomal protein S3 [Micrococcus luteus NCTC 2665]
gi|289706539|ref|ZP_06502889.1| ribosomal protein S3 [Micrococcus luteus SK58]
gi|259495253|sp|C5CC56|RS3_MICLC RecName: Full=30S ribosomal protein S3
gi|239839400|gb|ACS31197.1| SSU ribosomal protein S3P [Micrococcus luteus NCTC 2665]
gi|289556674|gb|EFD50015.1| ribosomal protein S3 [Micrococcus luteus SK58]
Length = 272
Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats.
Identities = 104/210 (49%), Positives = 147/210 (70%), Gaps = 4/210 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQKINP FRLG+ S WFA G Y L ED+KIRE + +++AG++K+
Sbjct: 1 MGQKINPNGFRLGITTDHVSHWFADSHKEGQRYADFLKEDVKIRELMTTGMERAGISKVE 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + ++IR +L +T +I L++ EV PE +A L+
Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQIQLNILEVKNPETDAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ +A+QL RV FRRAMK+A+QSAMR GA G+++ SGRL GAE+SR+E Y EGRVPL
Sbjct: 121 AQGVAEQLASRVAFRRAMKKAIQSAMRAGAQGIRIQCSGRLGGAEMSRSEFYREGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
TLRA+ID+G A+T +G G+KV++ D
Sbjct: 181 TLRANIDFGKFEAKTTFGRIGVKVWIYKGD 210
>gi|331004127|ref|ZP_08327607.1| 30S ribosomal protein S3 [Lachnospiraceae oral taxon 107 str.
F0167]
gi|330411537|gb|EGG90947.1| 30S ribosomal protein S3 [Lachnospiraceae oral taxon 107 str.
F0167]
Length = 218
Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats.
Identities = 95/219 (43%), Positives = 145/219 (66%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+SRW+A ++ L ED IR++L+ L A V+ I IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWSSRWYAD-KDFADCLVEDYNIRKFLKNKLYSASVSDIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
RII+++ARPG++IGK+G ++EK++K++S T+ ++ + + E+ +P+ +A L+A+SI
Sbjct: 60 SDRVRIILHTARPGVVIGKQGAEVEKLKKEVSKFTDKKVFIDIKEIKRPDRDAQLVAESI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE R+ FRRAMK + +M+ G G+K SGRL GA+++RTE Y EG +PLQTLRA
Sbjct: 120 ATQLENRISFRRAMKSTMSRSMKAGVLGIKASCSGRLGGADMARTEFYSEGTIPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
I YG A A T YG G+KV++ + + + + +
Sbjct: 180 DIQYGFAEANTTYGKVGVKVWIYTGEVLPQRKTQEGSVK 218
>gi|291562762|emb|CBL41578.1| SSU ribosomal protein S3P [butyrate-producing bacterium SS3/4]
Length = 218
Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats.
Identities = 101/211 (47%), Positives = 144/211 (68%), Gaps = 1/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+SRW+A +++ L ED KIR YL+ L AGV+KI IER
Sbjct: 1 MGQKVNPHGMRVGVIKDWDSRWYAE-ADFADNLIEDHKIRTYLKKRLYSAGVSKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+IIV++A+PG++IGK G++IEK++ ++ MT ++ + + EV +P+ A L+A+SI
Sbjct: 60 SDRVKIIVFTAKPGVVIGKGGSEIEKVKAEVQKMTAKKVFVDIKEVKRPDREAQLVAESI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE RV FRRAMK + +M+ G G+K GRL GA+++RTE Y EG +PLQTLRA
Sbjct: 120 AQQLENRVSFRRAMKSTMSRSMKAGVLGIKTAVGGRLGGADIARTEFYSEGTIPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYG A A+T YG G+KV++ + +
Sbjct: 180 DIDYGFAEADTTYGKLGVKVWIYKGEVLPTK 210
>gi|302543355|ref|ZP_07295697.1| ribosomal protein S3 [Streptomyces hygroscopicus ATCC 53653]
gi|302460973|gb|EFL24066.1| ribosomal protein S3 [Streptomyces himastatinicus ATCC 53653]
Length = 275
Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats.
Identities = 97/227 (42%), Positives = 153/227 (67%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FRLG+ + SRW+A Y + ED+ IR + +++AG++K+ IERT
Sbjct: 1 MGQKVNPHGFRLGITTDFKSRWYAD-KLYKDYVKEDVAIRRMMTKGMERAGISKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV PE++A L+AQ++
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQVQLNILEVKNPEVDAQLVAQAV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++++QS M+ GA G+K+ GRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLSSRVSFRRAMRKSMQSTMKAGAKGIKIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
++DYG A+T +G G+KV++ D + ++ A R + S
Sbjct: 180 NVDYGFFEAKTTFGRIGVKVWIYKGDVKNIAEVRAENAAARAGNRPS 226
>gi|296119215|ref|ZP_06837785.1| ribosomal protein S3 [Corynebacterium ammoniagenes DSM 20306]
gi|295967841|gb|EFG81096.1| ribosomal protein S3 [Corynebacterium ammoniagenes DSM 20306]
Length = 247
Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats.
Identities = 105/215 (48%), Positives = 149/215 (69%), Gaps = 2/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P RLG+ W + WFA +Y + ED+KIREYL L++AG+A ++IERT
Sbjct: 1 MGQKIHPHGLRLGITSDWKTHWFAD-KDYANYVAEDIKIREYLSKGLERAGIADVVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR++L +T + L++ EV + + NATL+AQSI
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRRELEKLTGKMVALNILEVKQVDANATLVAQSI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+Q AM + G+KV+ SGRL GAE+SRTE Y EGRVPL TLR
Sbjct: 120 AEQLVNRVAFRRAMRKAIQGAMRQPQVKGIKVLTSGRLGGAEMSRTERYHEGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
A IDYG A A T +G G+KV++ D V +
Sbjct: 180 AEIDYGFAEAHTTFGRIGVKVWIYKGDVVGGVRES 214
>gi|307328036|ref|ZP_07607217.1| ribosomal protein S3 [Streptomyces violaceusniger Tu 4113]
gi|306886341|gb|EFN17346.1| ribosomal protein S3 [Streptomyces violaceusniger Tu 4113]
Length = 275
Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats.
Identities = 97/227 (42%), Positives = 154/227 (67%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FRLG+ + SRW+A Y + ED+ IR + +++AG++K+ IERT
Sbjct: 1 MGQKVNPHGFRLGITTDFKSRWYAD-KLYKDYVKEDVAIRRMMTKGMERAGISKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV PE++A L+AQ++
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQVQLNILEVKNPEVDAQLVAQAV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++++QS+M+ GA G+K+ GRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLSSRVSFRRAMRKSMQSSMKAGAKGIKIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
++DYG A+T +G G+KV++ D + ++ A R + S
Sbjct: 180 NVDYGFFEAKTTFGRIGVKVWIYKGDVKNIAEVRAENAAARAGNRPS 226
>gi|58336636|ref|YP_193221.1| 30S ribosomal protein S3 [Lactobacillus acidophilus NCFM]
gi|75507660|sp|Q5FM84|RS3_LACAC RecName: Full=30S ribosomal protein S3
gi|58253953|gb|AAV42190.1| 30S ribosomal protein S3 [Lactobacillus acidophilus NCFM]
Length = 224
Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats.
Identities = 100/225 (44%), Positives = 151/225 (67%), Gaps = 1/225 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLGV W S+W+A Y L EDL+IR+++ LK A V+ + IER
Sbjct: 1 MGQKINPNGFRLGVIRDWESKWYAD-KGYKETLKEDLQIRKFISEKLKDASVSTVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK G+++E +RK+L+ +T ++H+++ E+ KP+++A L+A SI
Sbjct: 60 ANRINISIHTAKPGMVIGKGGSEVEALRKQLNALTGKQVHINIVEIKKPDLDAELVADSI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRAM++A Q AM GA G+KV SGRLNGA+++R E + EGRVPLQTLRA
Sbjct: 120 ARQLEARIAFRRAMRQATQRAMLAGAKGIKVQTSGRLNGADMARREWHTEGRVPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY A T YG G++V+++ + + + + + +
Sbjct: 180 DIDYAWVNAFTTYGEIGVQVWINRGEILPTRKNKPASKPAKGGNR 224
>gi|154149468|ref|YP_001405703.1| 30S ribosomal protein S3 [Campylobacter hominis ATCC BAA-381]
gi|171769698|sp|A7HZL2|RS3_CAMHC RecName: Full=30S ribosomal protein S3
gi|153805477|gb|ABS52484.1| ribosomal protein S3 [Campylobacter hominis ATCC BAA-381]
Length = 231
Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats.
Identities = 104/219 (47%), Positives = 148/219 (67%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N W SRWF S + ED KIR++L+ L AG+ +ILIERT
Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPVKSAIPENISEDYKIRKFLKAKLYYAGINQILIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ + +ARPG+IIGKKG++IE ++ ++ + ++ +++ E +P +A L A+++
Sbjct: 61 AKKLRVTIVAARPGVIIGKKGSEIENLKNEVVALLKKDVTINIKEERRPGSSAQLAAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV FRRAMK+ +QSA + GA G+K+ +GRL GAE++RTE YLEGRVPL TLRA
Sbjct: 121 AMQLEKRVAFRRAMKKVIQSAQKAGAKGIKISVAGRLGGAEMARTEWYLEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDYG A A T YG+ G+KV++ + + E
Sbjct: 181 KIDYGFAEAHTTYGNIGVKVWIFKGEVLQKGIQAEKTDE 219
>gi|168334346|ref|ZP_02692533.1| ribosomal protein S3 [Epulopiscium sp. 'N.t. morphotype B']
Length = 219
Score = 252 bits (644), Expect = 3e-65, Method: Composition-based stats.
Identities = 95/211 (45%), Positives = 141/211 (66%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+G+ W++RWFA ++ L ED KIR++++ L AG+ I IER
Sbjct: 1 MGQKVNPHGLRVGIIKDWDARWFADKKKFADYLVEDDKIRKFIKKKLYVAGIDXIEIERM 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ V +A+PG++IGK G IE +R+++ MT + +++ ++ +PE+NA L A+++
Sbjct: 61 AGKLRVHVSTAKPGIVIGKGGASIEALRQEVQKMTKDRVSINIVQIDRPEVNAQLAAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE R FRRAMK+ + A++ GA G+KV SGRL GAE++RTE Y EG +PLQTLRA
Sbjct: 121 ALQLENRTAFRRAMKQVMGRAIKAGAXGIKVSCSGRLGGAEMARTEAYSEGTIPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
I+YG A A+T YG GIKV++ + +
Sbjct: 181 DIEYGFAEADTTYGKLGIKVWIYKGEVLPQK 211
>gi|293380383|ref|ZP_06626454.1| 30S ribosomal protein S3 [Lactobacillus crispatus 214-1]
gi|290923066|gb|EFD99997.1| 30S ribosomal protein S3 [Lactobacillus crispatus 214-1]
Length = 224
Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats.
Identities = 101/225 (44%), Positives = 152/225 (67%), Gaps = 1/225 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLGV W S+W+A Y L+EDL+IR+++ LK A V+ + IER
Sbjct: 1 MGQKINPNGFRLGVIRDWESKWYAD-KGYKETLNEDLQIRKFISEKLKDASVSTVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK G+++E +RK+L+ +T ++H+++ E+ KP+++A L+A SI
Sbjct: 60 ANRINISIHTAKPGMVIGKGGSEVEALRKQLNALTGKQVHINIVEIKKPDLDAKLVADSI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE R+ FRRAM++A Q AMR GA G+KV SGRLNGA+++R E + EGRVPLQTLRA
Sbjct: 120 AHQLEARIAFRRAMRQATQRAMRAGAKGIKVQTSGRLNGADMARREWHTEGRVPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY A T YG G++V+++ + + + + + +
Sbjct: 180 DIDYAWVNAFTTYGEIGVQVWINRGEILPTRKNKPASKPAKGGNR 224
>gi|88854676|ref|ZP_01129342.1| 30S ribosomal protein S3 [marine actinobacterium PHSC20C1]
gi|88815837|gb|EAR25693.1| 30S ribosomal protein S3 [marine actinobacterium PHSC20C1]
Length = 271
Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats.
Identities = 105/231 (45%), Positives = 151/231 (65%), Gaps = 6/231 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQK+NP FRLG+ SRWF+ G Y + ED+KIR L+ +L +AGVA+I
Sbjct: 1 MGQKVNPYGFRLGITTDHVSRWFSDSTKPGQRYSDYVAEDVKIRNLLKSNLDRAGVARIE 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + E+IR +L ++ +I L++ EV PE A L+
Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEAERIRGELEKLSGKQIQLNILEVKNPEAEAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGA-DGVKVIASGRLNGAELSRTECYLEGRVPL 175
AQ IA+QL RV FRRAM++ +Q A R G+ GV++ SGRL GAE+SR+E Y EGRVPL
Sbjct: 121 AQGIAEQLAARVAFRRAMRKGLQGAQRVGSVKGVRIQVSGRLGGAEMSRSEYYREGRVPL 180
Query: 176 QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
TLRA+IDYG A+T +G G+KV+V D +++ + A + +
Sbjct: 181 HTLRANIDYGFYEAKTTFGRIGVKVWVYKGD-ITNKELAREQANQKSSRPE 230
>gi|228474735|ref|ZP_04059466.1| ribosomal protein S3 [Staphylococcus hominis SK119]
gi|314935838|ref|ZP_07843190.1| ribosomal protein S3 [Staphylococcus hominis subsp. hominis C80]
gi|228271398|gb|EEK12766.1| ribosomal protein S3 [Staphylococcus hominis SK119]
gi|313656403|gb|EFS20143.1| ribosomal protein S3 [Staphylococcus hominis subsp. hominis C80]
Length = 217
Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats.
Identities = 98/214 (45%), Positives = 151/214 (70%), Gaps = 1/214 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI R+GV W ++W+A ++ +LLHEDL+IR+++ LK+A V+ + IER
Sbjct: 1 MGQKINPIGLRVGVIRDWEAKWYAE-KDFASLLHEDLRIRKFIDNELKEASVSHVDIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++ +PG++IGK G++IEK+R KL+N+T+ ++H++V E+ K +I+A L+A++I
Sbjct: 60 ANRINIAIHTGKPGMVIGKGGSEIEKLRNKLNNLTDKKVHINVVEIKKVDIDARLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R FRR K+A+ AM+ GA G+K SGRL GA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLENRASFRRVQKQAITRAMKLGAKGIKTQVSGRLGGADIARAEQYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
IDY A A+T YG G+KV++ + + +++
Sbjct: 180 DIDYAHAEADTTYGKLGVKVWIYRGEVLPTKNTS 213
>gi|270291127|ref|ZP_06197350.1| 30S ribosomal protein S3 [Pediococcus acidilactici 7_4]
gi|304385408|ref|ZP_07367753.1| 30S ribosomal protein S3 [Pediococcus acidilactici DSM 20284]
gi|270280523|gb|EFA26358.1| 30S ribosomal protein S3 [Pediococcus acidilactici 7_4]
gi|304328615|gb|EFL95836.1| 30S ribosomal protein S3 [Pediococcus acidilactici DSM 20284]
Length = 223
Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats.
Identities = 95/221 (42%), Positives = 148/221 (66%), Gaps = 1/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FR+GV W ++W+A ++ L ED+KIRE++ L A V+ + IER
Sbjct: 1 MGQKVNPNGFRVGVIRDWQAKWYAD-KDFAKFLGEDIKIREFIAKQLTDASVSTVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK G+++EK+RK+L+ +T +H+++ E+ KP++ A L+ ++I
Sbjct: 60 ANRVNISIHTAKPGMVIGKGGSEVEKLRKQLNELTGKRVHINIVEIKKPDLEAKLVGENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE RV FRRAMK+A+Q +MR GA G+K +GRLNGA++SR E Y EG+VPL TLRA
Sbjct: 120 AAQLEGRVAFRRAMKQAMQRSMRAGAKGIKTQVAGRLNGADMSRVEHYSEGKVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
+DY A T YG G+K +V + + ++ ++ +
Sbjct: 180 DVDYAWVEARTTYGQLGVKTWVYRGEILPEAKEANNNSKEQ 220
>gi|88807890|ref|ZP_01123401.1| 30S ribosomal protein S3 [Synechococcus sp. WH 7805]
gi|88787929|gb|EAR19085.1| 30S ribosomal protein S3 [Synechococcus sp. WH 7805]
Length = 243
Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats.
Identities = 98/229 (42%), Positives = 139/229 (60%), Gaps = 6/229 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KI+P RLG+ SRW+A Y LL ED +IR+++ AG++ +LI R
Sbjct: 1 MGHKIHPTGLRLGITQEHRSRWYASSKSYPTLLQEDDRIRKFIHKKYGSAGISDVLIARK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIA 117
+ + +ARPG+++G++G+ IE +R +K N ++ ++V EV + + +A L+A
Sbjct: 61 ADQLEVELKTARPGVLVGRQGSGIEDLRSGIQKTVGDPNRQVRINVVEVERVDADAFLLA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ IAQQLE+RV FRR ++ AVQ A R G G+K+ SGRLNGAE++RTE EGRVPL T
Sbjct: 121 EYIAQQLEKRVAFRRTIRMAVQRAQRAGVLGLKIQVSGRLNGAEIARTEWTREGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSD---SDSTIPAAEHRVV 223
LRA IDY T VA T YG GIKV+V + + D + A R
Sbjct: 181 LRADIDYATKVASTTYGVLGIKVWVFKGEVLGDEAQQQLPVGATPRRRA 229
>gi|315652348|ref|ZP_07905340.1| 30S ribosomal protein S3 [Eubacterium saburreum DSM 3986]
gi|315485471|gb|EFU75861.1| 30S ribosomal protein S3 [Eubacterium saburreum DSM 3986]
Length = 218
Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats.
Identities = 94/219 (42%), Positives = 145/219 (66%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+SRW+A ++ L ED IR++L+ L A V+ I IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWSSRWYAD-KDFADCLVEDYNIRKFLKKKLYSASVSDIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
RII+++ARPG++IGK+G ++EK++K++S T+ ++ + + E+ +P+ +A L+A++I
Sbjct: 60 SDRVRIILHTARPGVVIGKQGVEVEKLKKEVSKFTDKKVFIDIKEIKRPDRDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE R+ FRRAMK + +M+ G G+K SGRL GA+++RTE Y EG +PLQTLRA
Sbjct: 120 AAQLENRISFRRAMKSTMSRSMKAGVLGIKASCSGRLGGADMARTEFYSEGTIPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
I YG A A T YG G+KV++ + + + + +
Sbjct: 180 DIQYGFAEANTTYGKVGVKVWIYTGEVLPQRKTQEGSVK 218
>gi|21223088|ref|NP_628867.1| 30S ribosomal protein S3 [Streptomyces coelicolor A3(2)]
gi|256785817|ref|ZP_05524248.1| 30S ribosomal protein S3 [Streptomyces lividans TK24]
gi|289769709|ref|ZP_06529087.1| 30S ribosomal protein S3 [Streptomyces lividans TK24]
gi|27734538|sp|Q9L0D4|RS3_STRCO RecName: Full=30S ribosomal protein S3
gi|7321298|emb|CAB82076.1| 30S ribosomal protein S3 [Streptomyces coelicolor A3(2)]
gi|289699908|gb|EFD67337.1| 30S ribosomal protein S3 [Streptomyces lividans TK24]
Length = 277
Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats.
Identities = 97/227 (42%), Positives = 151/227 (66%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FRLG+ + SRW+A Y + ED+ IR L +++AG++K+ IERT
Sbjct: 1 MGQKVNPHGFRLGITTDFKSRWYAD-KLYKDYVKEDVAIRRMLTSGMERAGISKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + +KIR +L +T ++ L++ EV PE +A L+AQ++
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADKIRGQLEKLTGKQVQLNILEVKSPETDAQLVAQAV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++++Q M+ GA G+K+ GRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLSSRVSFRRAMRKSMQGTMKAGAKGIKIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
++DYG A+T +G G+KV++ D + ++ A R + +
Sbjct: 180 NVDYGFFEAKTTFGRIGVKVWIYKGDVKNIAEVRAENAAARAGNRPA 226
>gi|302390964|ref|YP_003826784.1| 30S ribosomal protein S3P [Acetohalobium arabaticum DSM 5501]
gi|302203041|gb|ADL11719.1| SSU ribosomal protein S3P [Acetohalobium arabaticum DSM 5501]
Length = 216
Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats.
Identities = 96/215 (44%), Positives = 147/215 (68%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+++W+A EY +LHEDL+IR +++ + AG+A+I+IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDAKWYAEKDEYADVLHEDLEIRNHVKDKMYNAGIARIVIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ V++ARPG++IGK G+++ +R +L ++T +I ++V EV PE NA LIA+ +
Sbjct: 61 ADRVKLDVHTARPGMVIGKGGSEVNALRNELQDITGKQIQINVVEVKNPEKNAQLIAEGV 120
Query: 121 AQQLERRVVFRRAMKRAVQSA-MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
AQQLE+RV FRRAM++A+ + G +G ++ SGRL GAE++R E Y +G V LQTLR
Sbjct: 121 AQQLEQRVSFRRAMRQAMNRTLRQDGIEGFRIECSGRLGGAEMARQEGYNKGNVSLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
A IDYG A T YG G+KV+++ + + D +
Sbjct: 181 ADIDYGFTEAYTTYGKIGVKVWINKGEILPDVEDE 215
>gi|116075761|ref|ZP_01473020.1| 30S ribosomal protein S3 [Synechococcus sp. RS9916]
gi|116067076|gb|EAU72831.1| 30S ribosomal protein S3 [Synechococcus sp. RS9916]
Length = 243
Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats.
Identities = 96/229 (41%), Positives = 138/229 (60%), Gaps = 6/229 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KI+P RLG+ SRW+A Y +LL ED +IR ++ AG++ +LI R
Sbjct: 1 MGHKIHPTGLRLGITQEHRSRWYASSKNYPSLLQEDDRIRRFIHKKYGSAGISDVLIARK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117
+ + +ARPG+++G++G+ IE++R + ++ ++V EV + + +A L+A
Sbjct: 61 ADQLEVELKTARPGVLVGRQGSGIEELRSGIQKTVGDNSRQVRINVVEVERVDADAFLLA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ IAQQLE+RV FRR ++ AVQ A R G G+K+ SGRLNGAE++RTE EGRVPL T
Sbjct: 121 EYIAQQLEKRVAFRRTIRMAVQRAQRAGVLGLKIQVSGRLNGAEIARTEWTREGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSD---SDSTIPAAEHRVV 223
LRA IDY T VA T YG GIKV+V + + D + A R
Sbjct: 181 LRADIDYATKVASTTYGVLGIKVWVFKGEVLGDEARQQLPVGATPRRRA 229
>gi|229829423|ref|ZP_04455492.1| hypothetical protein GCWU000342_01513 [Shuttleworthia satelles DSM
14600]
gi|229791854|gb|EEP27968.1| hypothetical protein GCWU000342_01513 [Shuttleworthia satelles DSM
14600]
Length = 218
Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats.
Identities = 96/214 (44%), Positives = 145/214 (67%), Gaps = 1/214 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+G+ W+SRW+A E+ L ED IR++L+ L AG++K+ IER+
Sbjct: 1 MGQKVNPHGLRVGIIKDWDSRWYAE-KEFADFLVEDHTIRDFLKKKLYGAGISKVEIERS 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ IVY+A+PG++IGK G +IEKI+ + +T ++ + + EV +P+ +A L+A++I
Sbjct: 60 SDRVKAIVYTAKPGVVIGKGGAEIEKIKAEAQKLTKKKLLIDIKEVKRPDKDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE RV FRRAMK + +M+ G G+K SGRL GA+++R+E Y EG +PLQTLRA
Sbjct: 120 AQQLENRVSFRRAMKSTMSRSMKTGIKGIKTKCSGRLGGADIARSESYNEGTIPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
IDYG A A+T YG G+KV++ + + + +
Sbjct: 180 DIDYGFAEADTTYGKVGVKVWIYKGEVLPNKNKA 213
>gi|227879249|ref|ZP_03997119.1| 30S ribosomal protein S3 [Lactobacillus crispatus JV-V01]
gi|256844435|ref|ZP_05549921.1| 30S ribosomal protein S3 [Lactobacillus crispatus 125-2-CHN]
gi|256849177|ref|ZP_05554610.1| 30S ribosomal protein S3 [Lactobacillus crispatus MV-1A-US]
gi|262047193|ref|ZP_06020151.1| 30S ribosomal protein S3 [Lactobacillus crispatus MV-3A-US]
gi|227861143|gb|EEJ68792.1| 30S ribosomal protein S3 [Lactobacillus crispatus JV-V01]
gi|256613513|gb|EEU18716.1| 30S ribosomal protein S3 [Lactobacillus crispatus 125-2-CHN]
gi|256713953|gb|EEU28941.1| 30S ribosomal protein S3 [Lactobacillus crispatus MV-1A-US]
gi|260572438|gb|EEX29000.1| 30S ribosomal protein S3 [Lactobacillus crispatus MV-3A-US]
Length = 224
Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats.
Identities = 101/225 (44%), Positives = 153/225 (68%), Gaps = 1/225 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLGV W S+W+A Y L+EDL+IR+++ LK A V+ + IER
Sbjct: 1 MGQKINPNGFRLGVIRDWESKWYAD-KGYKETLNEDLQIRKFISEKLKDASVSTVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK G+++E +RK+L+ +T ++H+++ E+ KP+++A L+A SI
Sbjct: 60 ANRINISIHTAKPGMVIGKGGSEVEALRKQLNALTGKQVHINIVEIKKPDLDAKLVADSI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRAM++A Q AMR GA G+KV SGRLNGA+++R E + EGRVPLQTLRA
Sbjct: 120 ARQLEARIAFRRAMRQATQRAMRAGAKGIKVQTSGRLNGADMARREWHTEGRVPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY A T YG G++V+++ + + + + + +
Sbjct: 180 DIDYAWVNAFTTYGEIGVQVWINRGEILPTRKNKPASKPAKGGNR 224
>gi|212697259|ref|ZP_03305387.1| hypothetical protein ANHYDRO_01827 [Anaerococcus hydrogenalis DSM
7454]
gi|256544512|ref|ZP_05471885.1| 30S ribosomal protein S3 [Anaerococcus vaginalis ATCC 51170]
gi|325848910|ref|ZP_08170420.1| ribosomal protein S3 [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|212675708|gb|EEB35315.1| hypothetical protein ANHYDRO_01827 [Anaerococcus hydrogenalis DSM
7454]
gi|256399837|gb|EEU13441.1| 30S ribosomal protein S3 [Anaerococcus vaginalis ATCC 51170]
gi|325480554|gb|EGC83616.1| ribosomal protein S3 [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 241
Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats.
Identities = 96/215 (44%), Positives = 146/215 (67%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FR+GV W+S+W+A ++ LL ED KIRE ++ + AG++ I IER
Sbjct: 1 MGQKVNPKGFRVGVIKEWDSKWYANKKDFSELLVEDHKIRELVKKEVYDAGISDIEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-TNSEIHLSVNEVPKPEINATLIAQS 119
N ++ VY+ +PG++IGK G +E+++KK+ + + ++V E+ +++A L+A++
Sbjct: 61 VNNIKVSVYTGKPGMVIGKGGAGVEELKKKVEKIAPGKRVIINVEEIKNQDVDAQLVAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA QLE R+ FRRAMK+AVQ MR GA G+K SGRL GA+++R+E Y EG+VPLQTLR
Sbjct: 121 IAAQLENRITFRRAMKQAVQRTMRAGAVGIKTQVSGRLGGADMARSEGYNEGKVPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
A +DYG A A+T YG G KV+++ + + +
Sbjct: 181 ADVDYGFAEADTQYGKIGCKVWINRGEVLPGEKAK 215
>gi|260584422|ref|ZP_05852169.1| 30S ribosomal protein S3 [Granulicatella elegans ATCC 700633]
gi|260157940|gb|EEW93009.1| 30S ribosomal protein S3 [Granulicatella elegans ATCC 700633]
Length = 220
Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats.
Identities = 93/212 (43%), Positives = 147/212 (69%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+PI R+G+ W+S+W+A ++ LHEDLKIR+Y++ L A V+ I +ER
Sbjct: 1 MGQKIHPIGMRVGIIRDWDSKWYAE-KDFAEFLHEDLKIRDYIRKQLSDASVSTIEVERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G++++K+R L+ +T ++H+++ E+ KP+++A L+A+ I
Sbjct: 60 ANRVNVSIHTAKPGMVIGKGGSEVDKLRTNLNKLTGKKVHINIVEIKKPDLDAKLVAEGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+ LERR+ FRRA K+A+Q MR GA G+K + SGRLNGA+++R+E Y EG VPL TLRA
Sbjct: 120 ARDLERRIAFRRAQKQAIQRTMRAGAKGIKTMVSGRLNGADIARSESYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
IDY A+T YG G+K ++ + +
Sbjct: 180 DIDYAWEEADTTYGKLGVKTWIYRDEVLPTRK 211
>gi|254391387|ref|ZP_05006590.1| 30S ribosomal protein S3 [Streptomyces clavuligerus ATCC 27064]
gi|294814473|ref|ZP_06773116.1| 30S ribosomal protein S3 [Streptomyces clavuligerus ATCC 27064]
gi|326442862|ref|ZP_08217596.1| 30S ribosomal protein S3 [Streptomyces clavuligerus ATCC 27064]
gi|197705077|gb|EDY50889.1| 30S ribosomal protein S3 [Streptomyces clavuligerus ATCC 27064]
gi|294327072|gb|EFG08715.1| 30S ribosomal protein S3 [Streptomyces clavuligerus ATCC 27064]
Length = 276
Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats.
Identities = 98/227 (43%), Positives = 154/227 (67%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FRLG+ + SRW+A Y + ED+ IR L +++AG++K+ IERT
Sbjct: 1 MGQKVNPHGFRLGITTDFKSRWYAD-KLYKDYVKEDVAIRRMLTSGMERAGISKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + +KIR +L +T ++ L++ EV PE++A L+AQ++
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADKIRGQLEKLTGKQVQLNILEVKNPEVDAQLVAQAV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++++QSAM+ GA G+K+ GRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLSSRVSFRRAMRKSMQSAMKAGAKGIKIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
+++YG A+T +G G+KV++ D + ++ A R + +
Sbjct: 180 NVEYGFFEAKTTFGRIGVKVWIYKGDVKNIAEVRAENAAARAGNRPA 226
>gi|268318857|ref|YP_003292513.1| ribosomal protein S3 [Lactobacillus johnsonii FI9785]
gi|262397232|emb|CAX66246.1| ribosomal protein S3 [Lactobacillus johnsonii FI9785]
gi|329666698|gb|AEB92646.1| 30S ribosomal protein S3 [Lactobacillus johnsonii DPC 6026]
Length = 222
Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats.
Identities = 98/221 (44%), Positives = 148/221 (66%), Gaps = 2/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLGVN W ++W+A Y L+EDL+IR+++ L A V+ + IER
Sbjct: 1 MGQKINPNGFRLGVNRDWEAKWYAD-KNYADTLNEDLRIRKFISEKLADASVSTVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK G ++E +RK+LS +TN +H+++ E+ KP+++A L+ + I
Sbjct: 60 ANRINISIHTAKPGMVIGKGGKEVEALRKQLSALTNKNVHINIVEIKKPDLDAKLVGEGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRA ++A Q +MR GA G+KV +GRLNGA+++R E + EG VPL TLRA
Sbjct: 120 ARQLEARIAFRRATRQATQRSMRSGAKGIKVQTAGRLNGADMARREWHTEGSVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
IDY A T YG G+KV+++ E+ P+ + +
Sbjct: 180 DIDYAWVEAATTYGQIGVKVWINRG-EILPQRKNKPSKKAK 219
>gi|116513048|ref|YP_811955.1| 30S ribosomal protein S3 [Lactococcus lactis subsp. cremoris SK11]
gi|125625137|ref|YP_001033620.1| 30S ribosomal protein S3 [Lactococcus lactis subsp. cremoris
MG1363]
gi|281492753|ref|YP_003354733.1| 50S ribosomal protein S3P [Lactococcus lactis subsp. lactis KF147]
gi|123320111|sp|Q02W30|RS3_LACLS RecName: Full=30S ribosomal protein S3
gi|152060867|sp|A2RNP9|RS3_LACLM RecName: Full=30S ribosomal protein S3
gi|116108702|gb|ABJ73842.1| SSU ribosomal protein S3P [Lactococcus lactis subsp. cremoris SK11]
gi|124493945|emb|CAL98940.1| 30S ribosomal protein S3 [Lactococcus lactis subsp. cremoris
MG1363]
gi|281376405|gb|ADA65891.1| SSU ribosomal protein S3P [Lactococcus lactis subsp. lactis KF147]
gi|300071945|gb|ADJ61345.1| 30S ribosomal protein S3 [Lactococcus lactis subsp. cremoris
NZ9000]
gi|326407626|gb|ADZ64697.1| 30S ribosomal protein S3 [Lactococcus lactis subsp. lactis CV56]
Length = 217
Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats.
Identities = 94/218 (43%), Positives = 143/218 (65%), Gaps = 1/218 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+GV W+++W+A EY LHEDL IR+ +Q L A V+ I ER
Sbjct: 1 MGQKVHPIGMRVGVIRDWDAKWYAE-KEYADYLHEDLAIRQLIQTKLADASVSLIETERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G +++ +R +L+ +T ++H+++ E+ KP+++A L+ + I
Sbjct: 60 INKVIVTLHTAKPGMVIGKSGANVDALRAELNKLTGKQVHINIVEIKKPDLDAHLVGEGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRA K+A+Q AMR GA G+K SGRLNGA+++R E Y EG VPL TLRA
Sbjct: 120 AKQLEARIAFRRAQKQAIQRAMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
IDY A+T YG G+KV++ + + S
Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPTKKSVKGEK 217
>gi|153816246|ref|ZP_01968914.1| hypothetical protein RUMTOR_02495 [Ruminococcus torques ATCC 27756]
gi|317501780|ref|ZP_07959966.1| ribosomal protein S3 [Lachnospiraceae bacterium 8_1_57FAA]
gi|331088699|ref|ZP_08337609.1| 30S ribosomal protein S3 [Lachnospiraceae bacterium 3_1_46FAA]
gi|145846429|gb|EDK23347.1| hypothetical protein RUMTOR_02495 [Ruminococcus torques ATCC 27756]
gi|316896813|gb|EFV18898.1| ribosomal protein S3 [Lachnospiraceae bacterium 8_1_57FAA]
gi|330407222|gb|EGG86725.1| 30S ribosomal protein S3 [Lachnospiraceae bacterium 3_1_46FAA]
Length = 218
Score = 252 bits (643), Expect = 4e-65, Method: Composition-based stats.
Identities = 98/211 (46%), Positives = 146/211 (69%), Gaps = 1/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+S+W+A ++ L ED +IR +L+ L AG++KI IER
Sbjct: 1 MGQKVNPHGLRVGVIKEWDSKWYAE-KDFADNLVEDHEIRTFLKKRLYSAGISKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+IIVY+A+PG++IGK G++IEK++ +L+ T+ ++ + + E+ +P+ +A L+A++I
Sbjct: 60 SDRVKIIVYTAKPGVVIGKGGSEIEKVKAELAQFTDKKLIVDIKEIKRPDKDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE R+ FRRAMK + M+ GA GVK SGRL GA+++RTE Y EG +PLQTLRA
Sbjct: 120 AQQLENRISFRRAMKSCMSRTMKAGALGVKTSVSGRLGGADMARTEFYSEGTIPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYG A A+T YG G+KV++ + +
Sbjct: 180 DIDYGFAEADTTYGKVGVKVWIYKGEVLPTK 210
>gi|227502660|ref|ZP_03932709.1| 30S ribosomal protein S3 [Corynebacterium accolens ATCC 49725]
gi|306835225|ref|ZP_07468259.1| 30S ribosomal protein S3 [Corynebacterium accolens ATCC 49726]
gi|227076390|gb|EEI14353.1| 30S ribosomal protein S3 [Corynebacterium accolens ATCC 49725]
gi|304568905|gb|EFM44436.1| 30S ribosomal protein S3 [Corynebacterium accolens ATCC 49726]
Length = 248
Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats.
Identities = 105/215 (48%), Positives = 148/215 (68%), Gaps = 2/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P RLG+ W + WFA +Y + ED+KIR YL L++AG+A I+IERT
Sbjct: 1 MGQKIHPHGLRLGITSDWKTHWFAD-KDYANYVAEDIKIRNYLNKGLERAGIADIVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR++L +T + L++ EV + + NATL+A SI
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRRELEKLTGKMVALNILEVKQVDANATLVAHSI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAM + G+K++ SGRL GAE+SR E Y EGRVPL TLR
Sbjct: 120 AEQLVNRVAFRRAMRKAIQSAMRQPQVKGIKILLSGRLGGAEMSRVERYHEGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
A IDYGTA A T +G GIKV++ D V +
Sbjct: 180 AEIDYGTAEAHTTFGRIGIKVWIYKGDVVGGVRES 214
>gi|259047549|ref|ZP_05737950.1| 30S ribosomal protein S3 [Granulicatella adiacens ATCC 49175]
gi|259035740|gb|EEW36995.1| 30S ribosomal protein S3 [Granulicatella adiacens ATCC 49175]
Length = 220
Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats.
Identities = 93/212 (43%), Positives = 147/212 (69%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P+ R+G+ W+S+W+A ++ LHEDLKIR+Y++ L +A V+ I IER
Sbjct: 1 MGQKIHPLGMRVGIIRDWDSKWYAE-KDFAEFLHEDLKIRDYIRKQLNEASVSTIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G++++K+R L+ +T +H+++ E+ KP+++A L+A+ I
Sbjct: 60 ANRVNVSIHTAKPGMVIGKGGSEVDKLRTNLNKLTGKRVHINIVEIKKPDLDAKLVAEGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+ LERR+ FRRA K+A+Q MR GA G+K + SGRLNGA+++R+E Y EG VPL TLRA
Sbjct: 120 ARDLERRIAFRRAQKQAIQRTMRAGAKGIKTMVSGRLNGADIARSESYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
IDY A+T YG G+K ++ + +
Sbjct: 180 DIDYAWEEADTTYGKLGVKTWIYRDEVLPTRK 211
>gi|226356891|ref|YP_002786631.1| 30S ribosomal protein S3 [Deinococcus deserti VCD115]
gi|259495240|sp|C1CXG0|RS3_DEIDV RecName: Full=30S ribosomal protein S3
gi|226318881|gb|ACO46877.1| putative 30S ribosomal protein S3 [Deinococcus deserti VCD115]
Length = 248
Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats.
Identities = 108/226 (47%), Positives = 145/226 (64%), Gaps = 1/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KINP FRLG+ WNSRW+A +Y LL ED KIR+ + L AG+A++ IER
Sbjct: 1 MGNKINPNGFRLGITRGWNSRWYAGKKQYAGLLKEDEKIRKLVDKKLSAAGIARVEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119
+ +I+ +A+PG++IGK G I+++R + + + + ++V E+P P I+A L+A
Sbjct: 61 GQQVNVIISAAKPGIVIGKGGDSIKQLRADIEKLVSAGTVAVNVAEIPNPNISAPLVALR 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA+Q+ERR FRRAMK+A Q M GA GVKV+ SGRL GAE +R E EGRVPL TLR
Sbjct: 121 IAEQIERRFAFRRAMKQAAQRVMESGARGVKVVLSGRLGGAEQARRETVREGRVPLHTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
A IDYGTA+A T YG GIKV V + + TI + R E+
Sbjct: 181 ADIDYGTALARTTYGILGIKVMVFTGEVIGGRTETIARPQRRNDER 226
>gi|56416997|ref|YP_154071.1| 30S ribosomal protein S3 [Anaplasma marginale str. St. Maries]
gi|222475365|ref|YP_002563782.1| 30S ribosomal protein S3 (rpsC) [Anaplasma marginale str. Florida]
gi|254995173|ref|ZP_05277363.1| 30S ribosomal protein S3 [Anaplasma marginale str. Mississippi]
gi|255003347|ref|ZP_05278311.1| 30S ribosomal protein S3 [Anaplasma marginale str. Puerto Rico]
gi|255004471|ref|ZP_05279272.1| 30S ribosomal protein S3 [Anaplasma marginale str. Virginia]
gi|81677622|sp|Q5PA64|RS3_ANAMM RecName: Full=30S ribosomal protein S3
gi|254764509|sp|B9KJ64|RS3_ANAMF RecName: Full=30S ribosomal protein S3
gi|56388229|gb|AAV86816.1| 30S ribosomal protein S3 [Anaplasma marginale str. St. Maries]
gi|222419503|gb|ACM49526.1| 30S ribosomal protein S3 (rpsC) [Anaplasma marginale str. Florida]
Length = 211
Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats.
Identities = 109/212 (51%), Positives = 151/212 (71%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ TW+S W+A G Y + LHEDL +R +++ A V++++I R
Sbjct: 1 MGQKSNPIGLRLGIVGTWDSLWYAGGG-YASKLHEDLLLRSFVKKTFHHAAVSRVVIARK 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I ++SARPG+IIGKKGTDI+++++K++ M N ++ L + EV KP++ A LIA++I
Sbjct: 60 VDAVIINIHSARPGVIIGKKGTDIDRVKQKIAQMVNHDVELHIVEVKKPDLKAALIAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+RV FRRAMKR VQ+ ++ GA GVKV SGRL GAE++RTE Y EG VPL T RA
Sbjct: 120 AQQLEKRVSFRRAMKRGVQNCLKLGARGVKVSCSGRLGGAEIARTEWYKEGSVPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
+IDY A A+T YG G+KV+V + D + +
Sbjct: 180 NIDYSCAEAKTIYGIVGVKVWVYVGDSRTGGE 211
>gi|311087404|gb|ADP67484.1| 30S ribosomal protein S3 [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
Length = 233
Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats.
Identities = 104/212 (49%), Positives = 152/212 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS WFA ++ L D K+R++L L++A +++I+IER
Sbjct: 1 MGQKVHPNGMRLGIIKKWNSVWFANTKDFADHLDSDYKVRQFLMKTLEKASISRIIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +Y+ARPG++IGKKG D+EK+R ++ +T + ++++EV KPE++A L++ SI
Sbjct: 61 AKSIRVTIYTARPGIVIGKKGEDVEKLRISIAKITRVPVQINISEVRKPELDAKLVSDSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV+FRRAMKR+VQ+AMR GA G+KV SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 TSQLERRVMFRRAMKRSVQNAMRQGAKGIKVEVSGRLGGAEIARREWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
+IDY + A T YG G+KV++ + + +
Sbjct: 181 NIDYSISEAHTTYGVIGVKVWIFKGEILGGME 212
>gi|224510697|pdb|3FIC|C Chain C, T. Thermophilus 70s Ribosome In Complex With Mrna, Trnas
And Ef-Tu.Gdp.Kirromycin Ternary Complex, Fitted To A
6.4 A Cryo-Em Map. This File Contains The 30s Subunit
And The Ligands
Length = 207
Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats.
Identities = 100/207 (48%), Positives = 139/207 (67%)
Query: 2 GQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTH 61
G KI+PI FRLG+ W SRW+A +Y LL ED +IR L+ L AG+A++ IER
Sbjct: 1 GNKIHPIGFRLGITRDWESRWYAGKKQYRHLLLEDQRIRGLLEKELYSAGLARVDIERAA 60
Query: 62 KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIA 121
N + V+ A+PG++IG+ G I +R++L+ +T + L+V EV P ++A L+AQ +A
Sbjct: 61 DNVAVTVHVAKPGVVIGRGGERIRVLREELAKLTGKNVALNVQEVQNPNLSAPLVAQRVA 120
Query: 122 QQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH 181
+Q+ERR RRA+K+AVQ M GA G KVI SGR+ GAE +RTE +GRVPL TLRA+
Sbjct: 121 EQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSGRIGGAEQARTEWAAQGRVPLHTLRAN 180
Query: 182 IDYGTAVAETAYGSCGIKVYVSLRDEV 208
IDYG A+A T YG G+K Y+ L + +
Sbjct: 181 IDYGFALARTTYGVLGVKAYIFLGEVI 207
>gi|302553548|ref|ZP_07305890.1| ribosomal protein S3 [Streptomyces viridochromogenes DSM 40736]
gi|302471166|gb|EFL34259.1| ribosomal protein S3 [Streptomyces viridochromogenes DSM 40736]
Length = 274
Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats.
Identities = 96/227 (42%), Positives = 150/227 (66%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FRLGV + SRW+A Y + ED+ IR + +++AG++K+ IERT
Sbjct: 1 MGQKVNPHGFRLGVTTDFKSRWYAD-KLYKDYVKEDVAIRRMMTSGMERAGISKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PE +A L+AQ++
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKSPETDAQLVAQAV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++++Q M+ GA G+K+ GRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLSSRVSFRRAMRKSMQGTMKAGAKGIKIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
++DYG A+T +G G+KV++ D + ++ A R + +
Sbjct: 180 NVDYGFFEAKTTFGRIGVKVWIYKGDVKNIAEVRAENAAARAGNRPA 226
>gi|238916271|ref|YP_002929788.1| small subunit ribosomal protein S3 [Eubacterium eligens ATCC 27750]
gi|238871631|gb|ACR71341.1| small subunit ribosomal protein S3 [Eubacterium eligens ATCC 27750]
Length = 225
Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats.
Identities = 94/226 (41%), Positives = 149/226 (65%), Gaps = 2/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+++W+A ++ L ED IR++L+ L AG++KI ER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDAKWYAED-DFADNLVEDYNIRKFLKNKLYAAGISKIETERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119
+I++++A+PG++IGK G +IE ++K++ +T+ ++ + + EV +P+ +A L+A++
Sbjct: 60 SDRLKIVIHTAKPGIVIGKGGAEIENLKKQVEKLTSAKKLSIDIKEVKRPDKDAQLVAEN 119
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IAQQLE R+ FRRAMK + M+ GA G+K SGRL GA+++RTE Y EG +PLQTLR
Sbjct: 120 IAQQLENRISFRRAMKSCMGRTMKQGAKGIKTSCSGRLGGADMARTEFYSEGTIPLQTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
A IDYG A A+T YG G+KV++ + + ++ E +K
Sbjct: 180 ADIDYGFAEADTTYGKVGVKVWIYEGEVLPTKNNANANVEKEGSDK 225
>gi|254487466|ref|ZP_05100671.1| ribosomal protein S3 [Roseobacter sp. GAI101]
gi|214044335|gb|EEB84973.1| ribosomal protein S3 [Roseobacter sp. GAI101]
Length = 226
Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats.
Identities = 121/216 (56%), Positives = 160/216 (74%), Gaps = 4/216 (1%)
Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVY 69
RL VN TW+SRW+A +YG LL EDL IR +++ QAG+A+++IER HK CR+ ++
Sbjct: 1 MRLQVNRTWDSRWYADTKDYGDLLLEDLAIRAFIKKECAQAGIARVIIERPHKKCRVTIH 60
Query: 70 SARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV 129
+ARPG+IIGKKG DIE +R K++ MT S++HL++ EV KPE++A L+ +SIAQQLERRV
Sbjct: 61 TARPGVIIGKKGADIEGLRLKIAKMTKSDLHLNIVEVRKPELDAALVGESIAQQLERRVS 120
Query: 130 FRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189
FRRAMKRAVQ+AMR GA G++V +GRL GAE++RTE Y EGRVPL TLRA IDY A
Sbjct: 121 FRRAMKRAVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRADIDYAHVEA 180
Query: 190 ETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
TAYG GIK ++ + E+ + D PAA R ++
Sbjct: 181 MTAYGIIGIKTWIF-KGEIMEHD---PAARDRKAQE 212
>gi|269796249|ref|YP_003315704.1| 30S ribosomal protein S3P [Sanguibacter keddieii DSM 10542]
gi|269098434|gb|ACZ22870.1| SSU ribosomal protein S3P [Sanguibacter keddieii DSM 10542]
Length = 276
Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats.
Identities = 99/230 (43%), Positives = 149/230 (64%), Gaps = 4/230 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQK++P +RLG+ SRWFA G Y + ED++IR+ + L++AG++K+
Sbjct: 1 MGQKVHPHGYRLGITTDHRSRWFADSTKPGQRYRDYVREDVQIRKLMSTGLERAGISKVE 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV EI+A L+
Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQVQLNILEVKNAEIDAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ IA+QL RV FRRAM++ +QSA R GA G++V +GRL GAE+SR+E Y EGRVPL
Sbjct: 121 AQGIAEQLASRVSFRRAMRKGMQSAQRAGAKGIRVQCAGRLGGAEMSRSEFYREGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
TLRA+IDYG A T +G G+KV++ D + A + +
Sbjct: 181 TLRANIDYGFFEARTTFGRIGVKVWIYKGDMTEKEFAASQANQAPRAPRG 230
>gi|227903193|ref|ZP_04020998.1| 30S ribosomal protein S3 [Lactobacillus acidophilus ATCC 4796]
gi|227868998|gb|EEJ76419.1| 30S ribosomal protein S3 [Lactobacillus acidophilus ATCC 4796]
Length = 224
Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats.
Identities = 101/225 (44%), Positives = 152/225 (67%), Gaps = 1/225 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLGV W S+W+A Y L EDL+IR+++ LK A V+ + IER
Sbjct: 1 MGQKINPNGFRLGVIRDWESKWYAD-KGYKETLKEDLQIRKFISEKLKDASVSTVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK G+++E +RK+L+ +T ++H+++ E+ KP+++A L+A SI
Sbjct: 60 ANRINISIHTAKPGMVIGKGGSEVEALRKQLNALTGKQVHINIVEIKKPDLDAELVADSI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRAM++A Q AMR GA G+KV SGRLNGA+++R E + EGRVPLQTLRA
Sbjct: 120 ARQLEARIAFRRAMRQATQRAMRAGAKGIKVQTSGRLNGADMARREWHTEGRVPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY A T YG G++V+++ + + + + + +
Sbjct: 180 DIDYAWVNAFTTYGEIGVQVWINRGEILPTRKNKPASKPAKGGNR 224
>gi|160942895|ref|ZP_02090134.1| hypothetical protein FAEPRAM212_00371 [Faecalibacterium prausnitzii
M21/2]
gi|158445796|gb|EDP22799.1| hypothetical protein FAEPRAM212_00371 [Faecalibacterium prausnitzii
M21/2]
Length = 234
Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats.
Identities = 105/231 (45%), Positives = 140/231 (60%), Gaps = 13/231 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+SRWFA ++ L ED KIR L+ LK AGV KI IERT
Sbjct: 1 MGQKVNPHGIRVGVIKDWDSRWFASKKDFSDNLVEDHKIRTELKAQLKDAGVPKIEIERT 60
Query: 61 HK------NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINAT 114
+ +Y A+PG++IGK G + ++ KL+ + ++V EV P NA
Sbjct: 61 VDPSTSAPRVNVNIYCAKPGMVIGKGGEERIALQNKLTKEYGKTVIVNVIEVKSPSTNAQ 120
Query: 115 LIAQSIAQQLERRVVFRRAMKRAVQSAMRFGA------DGVKVIASGRLNGAELSRTECY 168
L+A+ IA+QLE RV FRRAMK+ +++AM G+K + SGRL GA+++RTE Y
Sbjct: 121 LVAEDIARQLENRVTFRRAMKQCMRNAMSPRDRATVPAKGIKAMCSGRLGGADIARTESY 180
Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
EG +PLQTLRA IDYG A A T YG G+KV++ + EV S T P E
Sbjct: 181 HEGTIPLQTLRADIDYGFAEAATTYGRIGVKVWIY-KGEVLKSAKTAPKKE 230
>gi|315037536|ref|YP_004031104.1| 30S ribosomal protein S3 [Lactobacillus amylovorus GRL 1112]
gi|325956009|ref|YP_004286619.1| 30S ribosomal protein S3 [Lactobacillus acidophilus 30SC]
gi|312275669|gb|ADQ58309.1| 30S ribosomal protein S3 [Lactobacillus amylovorus GRL 1112]
gi|325332574|gb|ADZ06482.1| 30S ribosomal protein S3 [Lactobacillus acidophilus 30SC]
gi|327182832|gb|AEA31279.1| 30S ribosomal protein S3 [Lactobacillus amylovorus GRL 1118]
Length = 224
Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats.
Identities = 100/225 (44%), Positives = 152/225 (67%), Gaps = 1/225 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLGV W S+W+A Y L+EDL+IR+++ LK A V+ + IER
Sbjct: 1 MGQKINPNGFRLGVIRDWESKWYAD-KGYKETLNEDLRIRKFISEKLKDASVSTVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK G+++E +RK+L+ +T ++H+++ E+ KP+++A L+A I
Sbjct: 60 ANRINISIHTAKPGMVIGKGGSEVEALRKQLNALTGKQVHINIVEIKKPDLDAELVADGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRAM++A Q AMR GA G+KV SGRLNGA+++R E + EGRVPLQTLRA
Sbjct: 120 ARQLEARIAFRRAMRQATQRAMRAGAKGIKVQTSGRLNGADMARREWHTEGRVPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY A T YG G++V+++ + + + + + +
Sbjct: 180 DIDYAWVNAFTTYGEIGVQVWINRGEVLPTRKNKPASKPAKGGNR 224
>gi|78357294|ref|YP_388743.1| 30S ribosomal protein S3 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|91207653|sp|Q30Z48|RS3_DESDG RecName: Full=30S ribosomal protein S3
gi|78219699|gb|ABB39048.1| SSU ribosomal protein S3P [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 213
Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats.
Identities = 107/208 (51%), Positives = 147/208 (70%), Gaps = 1/208 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG N W SRWF+ EY + + ED IR+Y++ L AG++KI IER
Sbjct: 1 MGQKVHPFGFRLGYNKNWQSRWFS-KKEYASFVFEDHNIRKYVKKTLYHAGLSKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+I+ +ARPG++IG+KG +IEK+R L + E + VNE+ +PE +A L+A++I
Sbjct: 60 GGKVRLILSTARPGIVIGRKGVEIEKLRADLRRKFSREFSIEVNEIRRPETDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV FRRAMKR V + +FGA+G+KV +GRL GAE++R+E Y +GRVPLQTLRA
Sbjct: 120 AMQLERRVAFRRAMKRTVSMSRKFGAEGIKVACAGRLAGAEIARSEWYRDGRVPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
IDYG A A T YG G+KV++ + +
Sbjct: 180 DIDYGYAEAHTTYGIIGVKVWIFKGEIL 207
>gi|15674075|ref|NP_268250.1| 30S ribosomal protein S3 [Lactococcus lactis subsp. lactis Il1403]
gi|27734532|sp|Q9CDW8|RS3_LACLA RecName: Full=30S ribosomal protein S3
gi|12725147|gb|AAK06191.1|AE006438_5 30S ribosomal protein S3 [Lactococcus lactis subsp. lactis Il1403]
Length = 217
Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats.
Identities = 94/218 (43%), Positives = 143/218 (65%), Gaps = 1/218 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+GV W+++W+A EY LHEDL IR+ +Q L A V+ I ER
Sbjct: 1 MGQKVHPIGMRVGVIRDWDAKWYAE-KEYSDYLHEDLAIRQLIQTKLADASVSLIETERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G +++ +R +L+ +T ++H+++ E+ KP+++A L+ + I
Sbjct: 60 INKVIVTLHTAKPGMVIGKSGANVDALRAELNKLTGKQVHINIVEIKKPDLDAHLVGEGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRA K+A+Q AMR GA G+K SGRLNGA+++R E Y EG VPL TLRA
Sbjct: 120 AKQLEARIAFRRAQKQAIQRAMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
IDY A+T YG G+KV++ + + S
Sbjct: 180 DIDYAWEEADTTYGKLGVKVWIYRGEVLPTKKSVKGEK 217
>gi|295103931|emb|CBL01475.1| SSU ribosomal protein S3P [Faecalibacterium prausnitzii SL3/3]
Length = 234
Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats.
Identities = 105/231 (45%), Positives = 140/231 (60%), Gaps = 13/231 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+SRWFA ++ L ED KIR L+ LK AGV KI IERT
Sbjct: 1 MGQKVNPHGIRVGVIKDWDSRWFASKKDFSDNLIEDHKIRTELKAQLKDAGVPKIEIERT 60
Query: 61 HK------NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINAT 114
+ +Y A+PG++IGK G + ++ KL+ + ++V EV P NA
Sbjct: 61 VDPSTSAPRVNVNIYCAKPGMVIGKGGEERIALQNKLTKEYGKTVIVNVIEVKSPSTNAQ 120
Query: 115 LIAQSIAQQLERRVVFRRAMKRAVQSAMRFGA------DGVKVIASGRLNGAELSRTECY 168
L+A+ IA+QLE RV FRRAMK+ +++AM G+K + SGRL GA+++RTE Y
Sbjct: 121 LVAEDIARQLENRVTFRRAMKQCMRNAMSPRDRATVPAKGIKAMCSGRLGGADIARTESY 180
Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
EG +PLQTLRA IDYG A A T YG G+KV++ + EV S T P E
Sbjct: 181 HEGTIPLQTLRADIDYGFAEAATTYGRIGVKVWIY-KGEVLKSAKTAPKKE 230
>gi|296130489|ref|YP_003637739.1| ribosomal protein S3 [Cellulomonas flavigena DSM 20109]
gi|296022304|gb|ADG75540.1| ribosomal protein S3 [Cellulomonas flavigena DSM 20109]
Length = 276
Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats.
Identities = 104/229 (45%), Positives = 151/229 (65%), Gaps = 5/229 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQK+NP+ +RLG+ SRWFA G Y + ED++IR+ + L++AG+AK+
Sbjct: 1 MGQKVNPLGYRLGITTDHRSRWFADSTKPGQRYRDYVREDVQIRKLMSTGLERAGIAKVE 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV EI A L+
Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQVQLNILEVKNAEIEAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ IA+QL RV FRRAM++ +QSA R GA G++V SGRL GAE+SRTE Y EGRVPL
Sbjct: 121 AQGIAEQLASRVSFRRAMRKGIQSAQRAGAKGIRVQVSGRLGGAEMSRTEFYREGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
TLRA+IDYG A T +G G+KV+V D +++ + A +
Sbjct: 181 TLRANIDYGFFEARTTFGRIGVKVWVYKGD-MTEKEWAREQASQAPRPQ 228
>gi|288574668|ref|ZP_06393025.1| ribosomal protein S3 [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288570409|gb|EFC91966.1| ribosomal protein S3 [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 227
Score = 251 bits (642), Expect = 5e-65, Method: Composition-based stats.
Identities = 96/207 (46%), Positives = 148/207 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ +R+GV W SRWFA G Y LHEDLK+R++++ A ++K+ IER
Sbjct: 1 MGQKVHPVGYRVGVIRDWESRWFADGKNYAKNLHEDLKLRDWIKARWDGASISKVEIERV 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R +++ARPG++IGK G++I+K++++L MT S++ ++V E+ PE+ A L+A+++
Sbjct: 61 GKVIRFSIWTARPGVVIGKGGSEIQKVKEELQAMTGSKVMINVQEIKNPEVEAQLVAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A LE RV FRRAMK+++ M+ G G+K+ +GRL GAE++RTE Y EG++PL TLRA
Sbjct: 121 AAALEHRVSFRRAMKQSIFRTMKAGGKGIKIQCAGRLGGAEIARTEWYNEGQLPLSTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207
IDYG A A+T YG G+KV++ ++
Sbjct: 181 DIDYGLAEAKTMYGVIGVKVWIYRDEK 207
>gi|282855202|ref|ZP_06264534.1| ribosomal protein S3 [Propionibacterium acnes J139]
gi|282581790|gb|EFB87175.1| ribosomal protein S3 [Propionibacterium acnes J139]
gi|314924179|gb|EFS88010.1| ribosomal protein S3 [Propionibacterium acnes HL001PA1]
gi|314965089|gb|EFT09188.1| ribosomal protein S3 [Propionibacterium acnes HL082PA2]
gi|314982257|gb|EFT26350.1| ribosomal protein S3 [Propionibacterium acnes HL110PA3]
gi|315090444|gb|EFT62420.1| ribosomal protein S3 [Propionibacterium acnes HL110PA4]
gi|315093679|gb|EFT65655.1| ribosomal protein S3 [Propionibacterium acnes HL060PA1]
gi|327326706|gb|EGE68492.1| ribosomal protein S3 [Propionibacterium acnes HL103PA1]
Length = 269
Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats.
Identities = 105/207 (50%), Positives = 143/207 (69%), Gaps = 1/207 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLGV +RW+A +Y L+ ED+KIRE L +L++AG++ I IER
Sbjct: 1 MGQKINPHGFRLGVTTDHKTRWYAE-KQYAELVGEDVKIRELLHKNLERAGLSSIEIERR 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ I +Y+ARPG++IG+ G + E++R +L +T +I L++ EV PE +A L+AQ I
Sbjct: 60 SERVTIFLYAARPGIVIGRNGAEAERVRGELEKLTGKQIQLNILEVKSPETDAQLVAQGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++A QSAM GA G+++ SGRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLAARVAFRRAMRKAQQSAMNAGALGIRIKCSGRLGGAEMSRSEGYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207
IDYG A T +G G+KV++ D
Sbjct: 180 DIDYGFFEARTTFGRIGVKVWIYKGDV 206
>gi|255324742|ref|ZP_05365856.1| ribosomal protein S3 [Corynebacterium tuberculostearicum SK141]
gi|311740071|ref|ZP_07713905.1| 30S ribosomal protein S3 [Corynebacterium pseudogenitalium ATCC
33035]
gi|255298217|gb|EET77520.1| ribosomal protein S3 [Corynebacterium tuberculostearicum SK141]
gi|311305144|gb|EFQ81213.1| 30S ribosomal protein S3 [Corynebacterium pseudogenitalium ATCC
33035]
Length = 247
Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats.
Identities = 104/215 (48%), Positives = 147/215 (68%), Gaps = 2/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P RLG+ W + WFA +Y + ED+KIR YL L +AG+A ++IERT
Sbjct: 1 MGQKIHPHGLRLGITSDWKTHWFAD-KDYANYVAEDIKIRNYLNKGLDRAGIADVVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR++L +T + L++ EV + + NATL+A SI
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRRELEKLTGKMVALNILEVKQVDANATLVAHSI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++A+QSAM + G+K++ SGRL GAE+SR E Y EGRVPL TLR
Sbjct: 120 AEQLVNRVAFRRAMRKAIQSAMRQPQVKGIKILLSGRLGGAEMSRVERYHEGRVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
A IDYGTA A T +G GIKV++ D V +
Sbjct: 180 AEIDYGTAEAHTTFGRIGIKVWIYKGDVVGGVRES 214
>gi|238855074|ref|ZP_04645402.1| ribosomal protein S3 [Lactobacillus jensenii 269-3]
gi|256852042|ref|ZP_05557429.1| ribosomal protein S3 [Lactobacillus jensenii 27-2-CHN]
gi|260661389|ref|ZP_05862302.1| ribosomal protein S3 [Lactobacillus jensenii 115-3-CHN]
gi|260664859|ref|ZP_05865710.1| ribosomal protein S3 [Lactobacillus jensenii SJ-7A-US]
gi|282932131|ref|ZP_06337586.1| ribosomal protein S3 [Lactobacillus jensenii 208-1]
gi|282932830|ref|ZP_06338229.1| ribosomal protein S3 [Lactobacillus jensenii 208-1]
gi|297205083|ref|ZP_06922479.1| 30S ribosomal protein S3 [Lactobacillus jensenii JV-V16]
gi|313472589|ref|ZP_07813078.1| ribosomal protein S3 [Lactobacillus jensenii 1153]
gi|238832318|gb|EEQ24627.1| ribosomal protein S3 [Lactobacillus jensenii 269-3]
gi|256615454|gb|EEU20644.1| ribosomal protein S3 [Lactobacillus jensenii 27-2-CHN]
gi|260547844|gb|EEX23821.1| ribosomal protein S3 [Lactobacillus jensenii 115-3-CHN]
gi|260561342|gb|EEX27315.1| ribosomal protein S3 [Lactobacillus jensenii SJ-7A-US]
gi|281303046|gb|EFA95249.1| ribosomal protein S3 [Lactobacillus jensenii 208-1]
gi|281303741|gb|EFA95888.1| ribosomal protein S3 [Lactobacillus jensenii 208-1]
gi|297149661|gb|EFH29958.1| 30S ribosomal protein S3 [Lactobacillus jensenii JV-V16]
gi|313448946|gb|EFR61264.1| ribosomal protein S3 [Lactobacillus jensenii 1153]
Length = 224
Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats.
Identities = 98/225 (43%), Positives = 152/225 (67%), Gaps = 1/225 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP+ FRLGVN W ++WFA +Y L+EDL+IR+++ LK A V+ + IER
Sbjct: 1 MGQKINPLGFRLGVNRDWEAKWFAD-KDYKETLNEDLRIRDFVAKKLKDASVSTVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK G+++E +RK+L+ +T ++H+++ E+ KP+++A L+ S+
Sbjct: 60 ANRINISIHTAKPGMVIGKGGSEVEALRKQLNALTEKQVHINIVEIKKPDLDAELVGDSV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRA ++A Q AMR GA G+KV +GRLNGA+++R E + EG VPL TLRA
Sbjct: 120 ARQLEARIAFRRATRQATQRAMRAGAKGIKVQTAGRLNGADMARREWHTEGSVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY A T YG G+KV+++ + + + + + K
Sbjct: 180 DIDYAWVQALTTYGQIGVKVWINRGEILPGRKNRPASKRSKGGNK 224
>gi|238563917|ref|ZP_00438025.2| 30S ribosomal protein S3 [Burkholderia mallei GB8 horse 4]
gi|238519670|gb|EEP83139.1| 30S ribosomal protein S3 [Burkholderia mallei GB8 horse 4]
Length = 202
Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats.
Identities = 111/201 (55%), Positives = 152/201 (75%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V+ W SRW+A + + A+L ED+ +REYL+ LK A V +++IER
Sbjct: 1 MGQKIHPTGFRLAVSRNWASRWYANNNNFAAMLQEDIGVREYLKKKLKNASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN RI ++S+RPG++IGKKG DIE ++ +L +H+++ E+ KPE +A LIA SI
Sbjct: 61 AKNARITIFSSRPGVVIGKKGEDIELLKTELQRRMGVPVHVNIEEIRKPETDAQLIADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLERR++FRRAMKRA+Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLRA
Sbjct: 121 TQQLERRIMFRRAMKRAMQNAMRLGAQGIKIMSAGRLNGIEIARTEWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVY 201
IDY T+ A+T YG G+KV+
Sbjct: 181 DIDYATSEAKTTYGIIGVKVW 201
>gi|118474301|ref|YP_891250.1| 30S ribosomal protein S3 [Campylobacter fetus subsp. fetus 82-40]
gi|152060852|sp|A0RM17|RS3_CAMFF RecName: Full=30S ribosomal protein S3
gi|118413527|gb|ABK81947.1| ribosomal protein S3 [Campylobacter fetus subsp. fetus 82-40]
Length = 232
Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats.
Identities = 109/231 (47%), Positives = 153/231 (66%), Gaps = 5/231 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N W SRWF + + ED KIR++L+ L AGV++IL+ERT
Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPSKATLPENIGEDYKIRKFLKTKLYYAGVSQILVERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ V +ARPG+IIGKKG +IE +R +++ + N +I +++ E K +A L A+++
Sbjct: 61 AKKLRVTVVAARPGIIIGKKGGEIENLRSEVTKLVNKDIAINIKEERKAGSSAQLAAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV FRRAMK+ +Q A + GA G+KV +GRL GAE++RTE YLEGRVPL TLRA
Sbjct: 121 AMQLERRVAFRRAMKKVIQGAQKAGAKGIKVSVAGRLGGAEMARTEWYLEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV-----SDSDSTIPAAEHRVVEKD 226
IDYG A A T YG+ G+KV++ + + +D + + R +
Sbjct: 181 RIDYGFAEAHTTYGNIGVKVWIFKGEVLQKGIQADKNEDTSPKKPRRARRG 231
>gi|298345466|ref|YP_003718153.1| 30S ribosomal protein S3 [Mobiluncus curtisii ATCC 43063]
gi|304391022|ref|ZP_07372974.1| 30S ribosomal protein S3 [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|315655875|ref|ZP_07908773.1| 30S ribosomal protein S3 [Mobiluncus curtisii ATCC 51333]
gi|315656199|ref|ZP_07909090.1| 30S ribosomal protein S3 [Mobiluncus curtisii subsp. holmesii ATCC
35242]
gi|298235527|gb|ADI66659.1| 30S ribosomal protein S3 [Mobiluncus curtisii ATCC 43063]
gi|304325905|gb|EFL93151.1| 30S ribosomal protein S3 [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|315489939|gb|EFU79566.1| 30S ribosomal protein S3 [Mobiluncus curtisii ATCC 51333]
gi|315493201|gb|EFU82801.1| 30S ribosomal protein S3 [Mobiluncus curtisii subsp. holmesii ATCC
35242]
Length = 273
Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats.
Identities = 101/210 (48%), Positives = 146/210 (69%), Gaps = 4/210 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQK++P FRLGV SRWFA G Y + ED++IR +Q L++AG++K+
Sbjct: 1 MGQKVHPTGFRLGVTAEHRSRWFADSTKSGQRYRDFVKEDVEIRRLMQDKLERAGISKVE 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT + +Y+ARPG++IG++G + +++R +L +T ++ L++ EV P+++A L+
Sbjct: 61 IERTRDRVSVDLYTARPGIVIGRRGAEADRLRAQLEKLTGKQVQLNIREVKNPDLDAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQSIA+QL RV FRRAM++ +QSA R GA G++V SGRL GAE+SR+E Y EGRVPL
Sbjct: 121 AQSIAEQLSARVSFRRAMRKGMQSAQRGGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
TLRA+IDYG A T +G G+KV++ D
Sbjct: 181 TLRANIDYGFYEARTTFGRIGVKVWIYKGD 210
>gi|291286318|ref|YP_003503134.1| 30S ribosomal protein S3 [Denitrovibrio acetiphilus DSM 12809]
gi|290883478|gb|ADD67178.1| ribosomal protein S3 [Denitrovibrio acetiphilus DSM 12809]
Length = 217
Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats.
Identities = 114/215 (53%), Positives = 156/215 (72%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FR+GVN W S W+A EY L ED++IR++L+ L QAG+++I IER
Sbjct: 1 MGQKVNPNGFRVGVNKPWKSVWYANKKEYRQQLLEDIRIRKFLKDRLMQAGLSRIGIERM 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
RI + ++RPG++IGKKG++I+K++K+L T SE+ L + EV KPEINA L+A++I
Sbjct: 61 GTRVRITLNTSRPGIVIGKKGSEIDKLKKELKKFTKSEVLLVIREVKKPEINAVLVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A Q++RRV FRRAMK+AV AM+ GA G++V +GRL GA+++RTE Y++GRVPLQTLRA
Sbjct: 121 AMQIQRRVAFRRAMKKAVLQAMKSGALGIRVACAGRLAGADMARTEWYIKGRVPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDYGT A T YG GIKV+V + + D S
Sbjct: 181 DIDYGTTEAMTTYGIIGIKVWVFTGEVLEDRKSEA 215
>gi|70725809|ref|YP_252723.1| 30S ribosomal protein S3 [Staphylococcus haemolyticus JCSC1435]
gi|91207842|sp|Q4L8A8|RS3_STAHJ RecName: Full=30S ribosomal protein S3
gi|68446533|dbj|BAE04117.1| 30S ribosomal protein S3 [Staphylococcus haemolyticus JCSC1435]
Length = 217
Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats.
Identities = 97/214 (45%), Positives = 151/214 (70%), Gaps = 1/214 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI R+G+ W ++W+A ++ +LLHEDL+IR+++ LK+A V+ + IER
Sbjct: 1 MGQKINPIGLRVGIIRDWEAKWYAE-KDFASLLHEDLRIRKFIDNELKEASVSHVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++ +PG++IGK G++IEK+R KL+N+T+ ++H++V E+ K +I+A L+A++I
Sbjct: 60 ANRINIAIHTGKPGMVIGKGGSEIEKLRNKLNNLTDKKVHINVIEIKKIDIDARLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R FRR K+A+ AM+ GA G+K SGRL GA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLENRASFRRVQKQAISRAMKLGAKGIKTQVSGRLGGADIARAEQYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
IDY A A+T YG G+KV++ + + +++
Sbjct: 180 DIDYAHAEADTTYGKLGVKVWIYRGEVLPTKNTS 213
>gi|182418828|ref|ZP_02950093.1| ribosomal protein S3 [Clostridium butyricum 5521]
gi|237666868|ref|ZP_04526853.1| ribosomal protein S3 [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182377325|gb|EDT74886.1| ribosomal protein S3 [Clostridium butyricum 5521]
gi|237658067|gb|EEP55622.1| ribosomal protein S3 [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 222
Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats.
Identities = 98/219 (44%), Positives = 142/219 (64%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV WN++W+A + L ED K+R++++ L AG++KI IER
Sbjct: 1 MGQKVNPHGLRVGVIKGWNAKWYANKKNFADNLIEDNKVRKFVKKELFSAGISKIEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIR-KKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
K ++ +Y+A+PG+IIGK G IE ++ K ++N + +++ EV E +A L+A++
Sbjct: 61 AKRVKLNIYTAKPGVIIGKGGAGIEALKGKLTQYISNKNVLINIVEVKSAEADAQLMAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA QLE+R+ FRRAMK+ +Q AM+ G GVK SGRL GAE++RTE Y EG +PLQTLR
Sbjct: 121 IAAQLEKRISFRRAMKQTMQRAMKHGIKGVKTACSGRLGGAEIARTEQYHEGTIPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
A IDYG A A+T YG G+KV+V + +
Sbjct: 181 ADIDYGFAEADTTYGKIGVKVWVYNGEVLPTKKVVEKEE 219
>gi|326799133|ref|YP_004316952.1| ribosomal protein S3 [Sphingobacterium sp. 21]
gi|326549897|gb|ADZ78282.1| ribosomal protein S3 [Sphingobacterium sp. 21]
Length = 267
Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats.
Identities = 99/212 (46%), Positives = 146/212 (68%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +PI RLG+ W+S WF G+ Y L ED KIR+YL + + GVAK++IERT
Sbjct: 1 MGQKAHPIGNRLGIIKGWDSNWF-GGNNYSDKLVEDEKIRKYLSVRIAKGGVAKVVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + +++ARPG++IGK G +++KI+++L +T ++ +++ E+ +PE++A L+A +
Sbjct: 60 LKRLTVTIHTARPGIVIGKGGQEVDKIKEELKKLTKKDVQINIFEIKRPELDAQLVADGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRAMK + S MR GA+G+K++ SGRL GAE++RTE Y EGR+PL T RA
Sbjct: 120 AKQLEARISFRRAMKTTIASTMRMGAEGIKIMCSGRLGGAEMARTEQYKEGRIPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
IDY A A T YG G+KV++ + D
Sbjct: 180 DIDYALAEAHTTYGKIGVKVWICKGEVYGKRD 211
>gi|242309325|ref|ZP_04808480.1| 30S ribosomal protein S3 [Helicobacter pullorum MIT 98-5489]
gi|239523896|gb|EEQ63762.1| 30S ribosomal protein S3 [Helicobacter pullorum MIT 98-5489]
Length = 235
Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats.
Identities = 114/220 (51%), Positives = 151/220 (68%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N W SRWF + + ED KIR++L+ L AGV+ ILIERT
Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPAFTTAPQNIAEDYKIRKFLKKELYYAGVSDILIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ R+ V +ARPG+IIGKKG D+EK+++ L + N +I L++ EV KP+ NA L A+S+
Sbjct: 61 ARKVRVTVVAARPGIIIGKKGADVEKLKESLKKIVNKDIFLNIKEVKKPQSNAQLSAESV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV FRRAMK+ +Q AM+ GA G+KV SGRL GAE++RTE Y+EGR+PL TLRA
Sbjct: 121 ATQLERRVAFRRAMKKVMQGAMKSGAKGIKVKVSGRLAGAEMARTEWYMEGRIPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
IDYG A A T YG+ G+KV++ + + E
Sbjct: 181 KIDYGFAEALTTYGNIGVKVWIFKGEVLQKGIQAEKQQEE 220
>gi|148238764|ref|YP_001224151.1| 30S ribosomal protein S3 [Synechococcus sp. WH 7803]
gi|189045372|sp|A5GIT9|RS3_SYNPW RecName: Full=30S ribosomal protein S3
gi|147847303|emb|CAK22854.1| 30S ribosomal protein S3 [Synechococcus sp. WH 7803]
Length = 243
Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats.
Identities = 97/229 (42%), Positives = 139/229 (60%), Gaps = 6/229 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KI+P RLG+ SRW+A Y LL ED +IR+++ AG++ +LI R
Sbjct: 1 MGHKIHPTGLRLGITQEHRSRWYASSKSYPTLLKEDDRIRKFIHKKYGSAGISDVLIARK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPKPEINATLIA 117
+ + +ARPG+++G++G+ IE++R + N ++ ++V EV + + +A L+A
Sbjct: 61 ADQLEVELKTARPGVLVGRQGSGIEELRSGIQKTVGDPNRQVRINVVEVERVDADAFLLA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ IAQQLE+RV FRR ++ AVQ A R G G+K+ SGRLNGAE++RTE EGRVPL T
Sbjct: 121 EYIAQQLEKRVAFRRTIRMAVQRAQRAGVLGLKIQVSGRLNGAEIARTEWTREGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSD---SDSTIPAAEHRVV 223
LRA IDY T VA T YG GIKV+V + + D + A R
Sbjct: 181 LRADIDYATKVASTTYGVLGIKVWVFKGEVLGDEAQQQLPVGATPRRRA 229
>gi|237753017|ref|ZP_04583497.1| 30s ribosomal protein s3 [Helicobacter winghamensis ATCC BAA-430]
gi|229375284|gb|EEO25375.1| 30s ribosomal protein s3 [Helicobacter winghamensis ATCC BAA-430]
Length = 235
Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats.
Identities = 111/220 (50%), Positives = 151/220 (68%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N W SRWF + + ED KIR++L+ L A V+ ILIERT
Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPAFNSAPQNIAEDYKIRKFLKKELYYASVSDILIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ V +ARPG+IIGKKG D+EK+++ L + N +I +++ EV KP+ NA L A+S+
Sbjct: 61 AKKVRVTVVAARPGIIIGKKGADVEKLKESLKKIVNKDIFINIKEVKKPQSNAQLAAESV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR+ FRRAMK+ +Q A++ GA G+KV SGRL GAE++RTE Y+EGR+PL TLRA
Sbjct: 121 ATQLERRIAFRRAMKKVMQGAIKSGAKGIKVRVSGRLAGAEMARTEWYMEGRIPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
IDYG A A T YG+ G+KV++ + + + E
Sbjct: 181 KIDYGFAEALTTYGNIGVKVWIFKGEVLQKGIQSEKQNED 220
>gi|46579720|ref|YP_010528.1| 30S ribosomal protein S3 [Desulfovibrio vulgaris str.
Hildenborough]
gi|120602803|ref|YP_967203.1| 30S ribosomal protein S3 [Desulfovibrio vulgaris DP4]
gi|61215611|sp|Q72CH4|RS3_DESVH RecName: Full=30S ribosomal protein S3
gi|152060859|sp|A1VEB0|RS3_DESVV RecName: Full=30S ribosomal protein S3
gi|46449135|gb|AAS95787.1| ribosomal protein S3 [Desulfovibrio vulgaris str. Hildenborough]
gi|120563032|gb|ABM28776.1| SSU ribosomal protein S3P [Desulfovibrio vulgaris DP4]
gi|311233511|gb|ADP86365.1| ribosomal protein S3 [Desulfovibrio vulgaris RCH1]
Length = 212
Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats.
Identities = 108/206 (52%), Positives = 145/206 (70%), Gaps = 1/206 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG N W SRW++ EY A + ED IR++++ L AG+AKI IER
Sbjct: 1 MGQKVHPFGFRLGYNKNWQSRWYS-KKEYPAFVFEDHNIRKFVKKTLYHAGLAKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+I+ +ARPG++IG+KG +IEK+R L E + VNE+ +PE+ + L+A++I
Sbjct: 60 GGKVRLILSTARPGIVIGRKGVEIEKLRADLRKKFKREFAIEVNEIRRPEVESQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV FRRAMKR V A +FGA+G+KV SGRL GAE++RTE Y +GRVPLQTLRA
Sbjct: 120 ALQLERRVAFRRAMKRTVSMARKFGAEGIKVTCSGRLAGAEIARTEWYRDGRVPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRD 206
ID+G A A T YG G+KV++ +
Sbjct: 180 DIDFGFAEARTTYGVIGVKVWIFKGE 205
>gi|118443821|ref|YP_877204.1| 30S ribosomal protein S3 [Clostridium novyi NT]
gi|152060856|sp|A0PXV2|RS3_CLONN RecName: Full=30S ribosomal protein S3
gi|118134277|gb|ABK61321.1| ribosomal protein S3 [Clostridium novyi NT]
Length = 221
Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats.
Identities = 98/221 (44%), Positives = 145/221 (65%), Gaps = 1/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+GV W+++W+A + L ED KIR++++ AG+AKI IERT
Sbjct: 1 MGQKVHPHGLRVGVIKDWDAKWYANSQNFADNLIEDDKIRKFVKKRSYSAGIAKIEIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119
K +I +++ +PG+IIGK G IE+++ ++ M + +++ EV +PE +A L+A++
Sbjct: 61 AKRVKINIHTGKPGMIIGKGGKGIEELKSEILKMIKEKNVIINIVEVKRPETDAQLMAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
+AQQLE+R+ FRRAMK+ +Q AMR GA GVK SGRL GAE++RTE Y EG +PLQTLR
Sbjct: 121 VAQQLEKRISFRRAMKQTIQRAMRSGAKGVKTACSGRLGGAEIARTEQYHEGTIPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
A IDYG A A+T YG G+KV++ + +
Sbjct: 181 ADIDYGFAEADTTYGKIGVKVWLYKGEVLPTKKVRTEEISQ 221
>gi|57238708|ref|YP_179839.1| 30S ribosomal protein S3 [Campylobacter jejuni RM1221]
gi|86149245|ref|ZP_01067476.1| ribosomal protein S3 [Campylobacter jejuni subsp. jejuni CF93-6]
gi|86152293|ref|ZP_01070504.1| ribosomal protein S3 [Campylobacter jejuni subsp. jejuni 260.94]
gi|86153025|ref|ZP_01071230.1| ribosomal protein S3 [Campylobacter jejuni subsp. jejuni HB93-13]
gi|88596276|ref|ZP_01099513.1| ribosomal protein S3 [Campylobacter jejuni subsp. jejuni 84-25]
gi|121612744|ref|YP_001001345.1| 30S ribosomal protein S3 [Campylobacter jejuni subsp. jejuni
81-176]
gi|148926792|ref|ZP_01810471.1| 30S ribosomal protein S3 [Campylobacter jejuni subsp. jejuni
CG8486]
gi|157415923|ref|YP_001483179.1| 30S ribosomal protein S3 [Campylobacter jejuni subsp. jejuni 81116]
gi|167006234|ref|ZP_02271992.1| 30S ribosomal protein S3 [Campylobacter jejuni subsp. jejuni
81-176]
gi|205355715|ref|ZP_03222485.1| 30S ribosomal protein S3 [Campylobacter jejuni subsp. jejuni
CG8421]
gi|218563287|ref|YP_002345067.1| 30S ribosomal protein S3 [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|283956157|ref|ZP_06373642.1| 30S ribosomal protein S3 [Campylobacter jejuni subsp. jejuni 1336]
gi|315125088|ref|YP_004067092.1| 30S ribosomal protein S3 [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|27734540|sp|Q9PLX7|RS3_CAMJE RecName: Full=30S ribosomal protein S3
gi|81675524|sp|Q5HS96|RS3_CAMJR RecName: Full=30S ribosomal protein S3
gi|152060853|sp|A1W1V4|RS3_CAMJJ RecName: Full=30S ribosomal protein S3
gi|172047265|sp|A8FP15|RS3_CAMJ8 RecName: Full=30S ribosomal protein S3
gi|57167512|gb|AAW36291.1| ribosomal protein S3 [Campylobacter jejuni RM1221]
gi|85840027|gb|EAQ57285.1| ribosomal protein S3 [Campylobacter jejuni subsp. jejuni CF93-6]
gi|85840782|gb|EAQ58033.1| ribosomal protein S3 [Campylobacter jejuni subsp. jejuni 260.94]
gi|85843910|gb|EAQ61120.1| ribosomal protein S3 [Campylobacter jejuni subsp. jejuni HB93-13]
gi|87249801|gb|EAQ72760.1| ribosomal protein S3 [Campylobacter jejuni subsp. jejuni 81-176]
gi|88191117|gb|EAQ95089.1| ribosomal protein S3 [Campylobacter jejuni subsp. jejuni 84-25]
gi|112360994|emb|CAL35795.1| 30S ribosomal protein S3 [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|145844517|gb|EDK21624.1| 30S ribosomal protein S3 [Campylobacter jejuni subsp. jejuni
CG8486]
gi|157386887|gb|ABV53202.1| 30S ribosomal protein S3 [Campylobacter jejuni subsp. jejuni 81116]
gi|205346492|gb|EDZ33125.1| 30S ribosomal protein S3 [Campylobacter jejuni subsp. jejuni
CG8421]
gi|283792311|gb|EFC31095.1| 30S ribosomal protein S3 [Campylobacter jejuni subsp. jejuni 1336]
gi|284926892|gb|ADC29244.1| 30S ribosomal protein S3 [Campylobacter jejuni subsp. jejuni
IA3902]
gi|307748561|gb|ADN91831.1| 30S ribosomal protein S3 [Campylobacter jejuni subsp. jejuni M1]
gi|315018810|gb|ADT66903.1| 30S ribosomal protein S3 [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|315059147|gb|ADT73476.1| SSU ribosomal protein S3p [Campylobacter jejuni subsp. jejuni S3]
gi|315926628|gb|EFV06008.1| ribosomal protein S3 [Campylobacter jejuni subsp. jejuni DFVF1099]
gi|315930387|gb|EFV09463.1| ribosomal protein S3 [Campylobacter jejuni subsp. jejuni 305]
gi|315931331|gb|EFV10300.1| ribosomal protein S3 [Campylobacter jejuni subsp. jejuni 327]
Length = 233
Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats.
Identities = 108/232 (46%), Positives = 156/232 (67%), Gaps = 6/232 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N W SRWF + + ED KIR +L+ L AG+++IL+ERT
Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPTKANLVENIGEDYKIRAFLKRKLYYAGISQILVERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ V +ARPG+IIGKKG+D++ +RK+L ++ ++++++ E K +A L A+S+
Sbjct: 61 AKKLRVTVVAARPGIIIGKKGSDVDNLRKELQDLIGKDVNINIKEERKAGASAQLAAESV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+R+ FRRAMK+ +Q A + GA G+KV SGRL GAE++RTE YLEGRVPL TLRA
Sbjct: 121 ATQLEKRIAFRRAMKKVIQGAQKAGAKGIKVSVSGRLGGAEMARTEWYLEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV------SDSDSTIPAAEHRVVEKD 226
IDYG A A T YG+ G+KV++ + + ++ + PA + R +
Sbjct: 181 KIDYGFAEARTTYGNIGVKVWIFKGEVLHKGMQPEKTEESAPAKKPRRTRRG 232
>gi|291547988|emb|CBL21096.1| SSU ribosomal protein S3P [Ruminococcus sp. SR1/5]
Length = 218
Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats.
Identities = 98/211 (46%), Positives = 141/211 (66%), Gaps = 1/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+SRW+A + L ED IR +L+ L AGV+KI IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWYAEDK-FADYLVEDYNIRTFLKKKLYSAGVSKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+II+Y+A+PG++IGK G +IEK++ +L T+ ++ + + EV +P+ +A L+A++I
Sbjct: 60 SDRVKIIIYTAKPGIVIGKGGAEIEKVKAELQKYTDKKLIVDIKEVKRPDKDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE R+ FRRAMK +Q M+ GA G+K SGRL GA+++RTE Y EG +PLQTLRA
Sbjct: 120 ALQLENRISFRRAMKSTMQRTMKAGAKGIKTSVSGRLGGADMARTEFYSEGTIPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYG A A+T YG G+K ++ + +
Sbjct: 180 DIDYGFAEADTTYGKVGVKAWIYNGEILPTK 210
>gi|227509937|ref|ZP_03939986.1| 30S ribosomal protein S3 [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
gi|227512870|ref|ZP_03942919.1| 30S ribosomal protein S3 [Lactobacillus buchneri ATCC 11577]
gi|227522998|ref|ZP_03953047.1| 30S ribosomal protein S3 [Lactobacillus hilgardii ATCC 8290]
gi|227083870|gb|EEI19182.1| 30S ribosomal protein S3 [Lactobacillus buchneri ATCC 11577]
gi|227089816|gb|EEI25128.1| 30S ribosomal protein S3 [Lactobacillus hilgardii ATCC 8290]
gi|227190543|gb|EEI70610.1| 30S ribosomal protein S3 [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
Length = 221
Score = 251 bits (641), Expect = 6e-65, Method: Composition-based stats.
Identities = 95/219 (43%), Positives = 148/219 (67%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KINP R+G+ W ++W+A G +Y A L EDL+IR+Y++ L A V+ + IER
Sbjct: 1 MGNKINPNGLRVGIIRDWEAKWYA-GKDYAAYLREDLQIRKYIEKRLANASVSTVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK G+++E +RK+L+N+T +H+++ E+ KP+++A L+ ++I
Sbjct: 60 ANRVNISIHTAKPGMVIGKGGSEVESLRKELNNLTGKRVHINIIEIKKPDLDAKLVGENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRAM++A+Q MR GA G+K +GRLNGA+++R E Y +G VPL TLRA
Sbjct: 120 ARQLEGRVAFRRAMRQAMQRTMRAGAKGIKTQVAGRLNGADMARVESYSDGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDY A T YGS G+K ++ + + + A +
Sbjct: 180 DIDYSWVEAFTTYGSIGVKTWIYRGEILPEKPKNSEADK 218
>gi|199598838|ref|ZP_03212249.1| Ribosomal protein S3 [Lactobacillus rhamnosus HN001]
gi|229552714|ref|ZP_04441439.1| ribosomal protein S3 [Lactobacillus rhamnosus LMS2-1]
gi|258509476|ref|YP_003172227.1| 30S ribosomal protein S3P [Lactobacillus rhamnosus GG]
gi|258540673|ref|YP_003175172.1| 30S ribosomal protein S3P [Lactobacillus rhamnosus Lc 705]
gi|199590250|gb|EDY98345.1| Ribosomal protein S3 [Lactobacillus rhamnosus HN001]
gi|229313920|gb|EEN79893.1| ribosomal protein S3 [Lactobacillus rhamnosus LMS2-1]
gi|257149403|emb|CAR88376.1| SSU/30S ribosomal protein S3P [Lactobacillus rhamnosus GG]
gi|257152349|emb|CAR91321.1| SSU/30S ribosomal protein S3P [Lactobacillus rhamnosus Lc 705]
gi|259650755|dbj|BAI42917.1| 30S ribosomal protein S3 [Lactobacillus rhamnosus GG]
gi|328478161|gb|EGF48007.1| 30S ribosomal protein S3 [Lactobacillus rhamnosus MTCC 5462]
Length = 220
Score = 251 bits (640), Expect = 6e-65, Method: Composition-based stats.
Identities = 98/218 (44%), Positives = 152/218 (69%), Gaps = 1/218 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FR+GV W+++W+A ++ LHED++IR ++ L+ A V++I IER
Sbjct: 1 MGQKINPTGFRVGVIRDWDAKWYAD-KDFADYLHEDIEIRNFINKKLQDASVSRIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I V++A+PG++IGK G+++E +RK+L+ +T ++H+++ E+ KP+++A L+ ++I
Sbjct: 60 AKRVNISVHTAKPGMVIGKGGSEVENLRKQLNKLTGRQVHINIVEIKKPDLDAKLVGENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE+R+ FRRAM++A+Q MR GA G+K ASGRLNGA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLEQRIAFRRAMRQAMQRTMRAGAKGIKTQASGRLNGADIARREHYNEGLVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
IDY A T YG GIK +++ + + + A
Sbjct: 180 DIDYAWEEAATTYGRIGIKTWINRGEILPEKPQQNNAK 217
>gi|325282646|ref|YP_004255187.1| ribosomal protein S3 [Deinococcus proteolyticus MRP]
gi|324314455|gb|ADY25570.1| ribosomal protein S3 [Deinococcus proteolyticus MRP]
Length = 259
Score = 251 bits (640), Expect = 7e-65, Method: Composition-based stats.
Identities = 110/227 (48%), Positives = 141/227 (62%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KINP FRLGV WNSRW+A Y +L ED KIR+ + L+ AG+A+I IER
Sbjct: 1 MGNKINPNGFRLGVTRGWNSRWYAGKKNYSQMLREDEKIRQLVHKELQAAGIARIEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119
+ +I+ +A+PG++IGK G I+ IR+ + NM + ++V E+P P +A L+A
Sbjct: 61 GQQINVIISAAKPGIVIGKGGESIKAIRQSIENMVEAGTVAVNVAEIPNPNTSAPLVALR 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA+Q+ERR FRRAMK+A Q M GA G KVI SGRL GAE +RTE LEGRVPL TLR
Sbjct: 121 IAEQIERRFAFRRAMKQAAQRVMESGARGCKVILSGRLGGAEQARTEKVLEGRVPLHTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
A IDYGTA A T YG GIKV V + + + R +
Sbjct: 181 ADIDYGTATASTTYGQLGIKVLVFNGEVIGGRTEGTQSRSARPANNE 227
>gi|242371891|ref|ZP_04817465.1| 30S ribosomal protein S3 [Staphylococcus epidermidis M23864:W1]
gi|242350398|gb|EES41999.1| 30S ribosomal protein S3 [Staphylococcus epidermidis M23864:W1]
Length = 217
Score = 251 bits (640), Expect = 7e-65, Method: Composition-based stats.
Identities = 97/214 (45%), Positives = 150/214 (70%), Gaps = 1/214 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI R+G+ W ++W+A ++ +LLHEDLKIR+++ LK+A V+ + IER
Sbjct: 1 MGQKINPIGLRVGIIRDWEAKWYAE-KDFASLLHEDLKIRKFIDNELKEASVSHVDIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++ +PG++IGK G++IEK+R KL+ +T+ ++H++V E+ K +I+A L+A++I
Sbjct: 60 ANRINIAIHTGKPGMVIGKGGSEIEKLRNKLNALTDKKVHINVIEIKKVDIDARLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R FRR K+A+ AM+ GA G+K SGRL GA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLENRASFRRVQKQAITRAMKLGAKGIKTQVSGRLGGADIARAEQYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
IDY A A+T YG G+KV++ + + +++
Sbjct: 180 DIDYAHAEADTTYGKLGVKVWIYRGEVLPTKNTS 213
>gi|315103973|gb|EFT75949.1| ribosomal protein S3 [Propionibacterium acnes HL050PA2]
Length = 269
Score = 251 bits (640), Expect = 7e-65, Method: Composition-based stats.
Identities = 105/207 (50%), Positives = 144/207 (69%), Gaps = 1/207 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLGV +RW+A +Y L+ ED+KIRE+L +L++AG++ I IER
Sbjct: 1 MGQKINPHGFRLGVTTDHKTRWYAE-KQYAELVGEDVKIREWLHKNLERAGLSSIEIERR 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ I +Y+ARPG++IG+ G + E++R +L +T +I L++ EV PE +A L+AQ I
Sbjct: 60 SERVTIFLYAARPGIVIGRNGAEAERVRGELEKLTGKQIQLNILEVKSPETDAQLVAQGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++A QSAM GA G+++ SGRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLAARVAFRRAMRKAQQSAMNAGALGIRIKCSGRLGGAEMSRSEGYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207
IDYG A T +G G+KV++ D
Sbjct: 180 DIDYGFFEARTTFGRIGVKVWIYKGDV 206
>gi|50843312|ref|YP_056539.1| 30S ribosomal protein S3 [Propionibacterium acnes KPA171202]
gi|289424825|ref|ZP_06426607.1| ribosomal protein S3 [Propionibacterium acnes SK187]
gi|289427613|ref|ZP_06429325.1| ribosomal protein S3 [Propionibacterium acnes J165]
gi|295131381|ref|YP_003582044.1| ribosomal protein S3 [Propionibacterium acnes SK137]
gi|61215506|sp|Q6A6N2|RS3_PROAC RecName: Full=30S ribosomal protein S3
gi|50840914|gb|AAT83581.1| 30S ribosomal protein S3 [Propionibacterium acnes KPA171202]
gi|289154788|gb|EFD03471.1| ribosomal protein S3 [Propionibacterium acnes SK187]
gi|289159104|gb|EFD07296.1| ribosomal protein S3 [Propionibacterium acnes J165]
gi|291377272|gb|ADE01127.1| ribosomal protein S3 [Propionibacterium acnes SK137]
gi|313763232|gb|EFS34596.1| ribosomal protein S3 [Propionibacterium acnes HL013PA1]
gi|313773091|gb|EFS39057.1| ribosomal protein S3 [Propionibacterium acnes HL074PA1]
gi|313793264|gb|EFS41322.1| ribosomal protein S3 [Propionibacterium acnes HL110PA1]
gi|313801092|gb|EFS42360.1| ribosomal protein S3 [Propionibacterium acnes HL110PA2]
gi|313808833|gb|EFS47287.1| ribosomal protein S3 [Propionibacterium acnes HL087PA2]
gi|313810373|gb|EFS48087.1| ribosomal protein S3 [Propionibacterium acnes HL083PA1]
gi|313812291|gb|EFS50005.1| ribosomal protein S3 [Propionibacterium acnes HL025PA1]
gi|313816568|gb|EFS54282.1| ribosomal protein S3 [Propionibacterium acnes HL059PA1]
gi|313818013|gb|EFS55727.1| ribosomal protein S3 [Propionibacterium acnes HL046PA2]
gi|313819926|gb|EFS57640.1| ribosomal protein S3 [Propionibacterium acnes HL036PA1]
gi|313823416|gb|EFS61130.1| ribosomal protein S3 [Propionibacterium acnes HL036PA2]
gi|313824888|gb|EFS62602.1| ribosomal protein S3 [Propionibacterium acnes HL063PA1]
gi|313830130|gb|EFS67844.1| ribosomal protein S3 [Propionibacterium acnes HL007PA1]
gi|313832599|gb|EFS70313.1| ribosomal protein S3 [Propionibacterium acnes HL056PA1]
gi|313837955|gb|EFS75669.1| ribosomal protein S3 [Propionibacterium acnes HL086PA1]
gi|314914338|gb|EFS78169.1| ribosomal protein S3 [Propionibacterium acnes HL005PA4]
gi|314917658|gb|EFS81489.1| ribosomal protein S3 [Propionibacterium acnes HL050PA1]
gi|314919610|gb|EFS83441.1| ribosomal protein S3 [Propionibacterium acnes HL050PA3]
gi|314925782|gb|EFS89613.1| ribosomal protein S3 [Propionibacterium acnes HL036PA3]
gi|314930201|gb|EFS94032.1| ribosomal protein S3 [Propionibacterium acnes HL067PA1]
gi|314957192|gb|EFT01296.1| ribosomal protein S3 [Propionibacterium acnes HL027PA1]
gi|314957768|gb|EFT01871.1| ribosomal protein S3 [Propionibacterium acnes HL002PA1]
gi|314960862|gb|EFT04963.1| ribosomal protein S3 [Propionibacterium acnes HL002PA2]
gi|314963536|gb|EFT07636.1| ribosomal protein S3 [Propionibacterium acnes HL082PA1]
gi|314969881|gb|EFT13979.1| ribosomal protein S3 [Propionibacterium acnes HL037PA1]
gi|314973021|gb|EFT17117.1| ribosomal protein S3 [Propionibacterium acnes HL053PA1]
gi|314975517|gb|EFT19612.1| ribosomal protein S3 [Propionibacterium acnes HL045PA1]
gi|314979741|gb|EFT23835.1| ribosomal protein S3 [Propionibacterium acnes HL072PA2]
gi|314984893|gb|EFT28985.1| ribosomal protein S3 [Propionibacterium acnes HL005PA1]
gi|314988675|gb|EFT32766.1| ribosomal protein S3 [Propionibacterium acnes HL005PA3]
gi|315077159|gb|EFT49226.1| ribosomal protein S3 [Propionibacterium acnes HL053PA2]
gi|315079844|gb|EFT51820.1| ribosomal protein S3 [Propionibacterium acnes HL078PA1]
gi|315083212|gb|EFT55188.1| ribosomal protein S3 [Propionibacterium acnes HL027PA2]
gi|315086834|gb|EFT58810.1| ribosomal protein S3 [Propionibacterium acnes HL002PA3]
gi|315089927|gb|EFT61903.1| ribosomal protein S3 [Propionibacterium acnes HL072PA1]
gi|315096751|gb|EFT68727.1| ribosomal protein S3 [Propionibacterium acnes HL038PA1]
gi|315097979|gb|EFT69955.1| ribosomal protein S3 [Propionibacterium acnes HL059PA2]
gi|315100622|gb|EFT72598.1| ribosomal protein S3 [Propionibacterium acnes HL046PA1]
gi|315106067|gb|EFT78043.1| ribosomal protein S3 [Propionibacterium acnes HL030PA1]
gi|315109226|gb|EFT81202.1| ribosomal protein S3 [Propionibacterium acnes HL030PA2]
gi|327325165|gb|EGE66971.1| ribosomal protein S3 [Propionibacterium acnes HL096PA3]
gi|327325205|gb|EGE67010.1| ribosomal protein S3 [Propionibacterium acnes HL096PA2]
gi|327332715|gb|EGE74449.1| ribosomal protein S3 [Propionibacterium acnes HL097PA1]
gi|327444006|gb|EGE90660.1| ribosomal protein S3 [Propionibacterium acnes HL043PA1]
gi|327449366|gb|EGE96020.1| ribosomal protein S3 [Propionibacterium acnes HL013PA2]
gi|327449406|gb|EGE96060.1| ribosomal protein S3 [Propionibacterium acnes HL043PA2]
gi|327451427|gb|EGE98081.1| ribosomal protein S3 [Propionibacterium acnes HL087PA3]
gi|327451598|gb|EGE98252.1| ribosomal protein S3 [Propionibacterium acnes HL092PA1]
gi|327451885|gb|EGE98539.1| ribosomal protein S3 [Propionibacterium acnes HL083PA2]
gi|328752099|gb|EGF65715.1| ribosomal protein S3 [Propionibacterium acnes HL087PA1]
gi|328755505|gb|EGF69121.1| ribosomal protein S3 [Propionibacterium acnes HL025PA2]
gi|328756289|gb|EGF69905.1| ribosomal protein S3 [Propionibacterium acnes HL020PA1]
gi|328761377|gb|EGF74904.1| ribosomal protein S3 [Propionibacterium acnes HL099PA1]
Length = 269
Score = 251 bits (640), Expect = 7e-65, Method: Composition-based stats.
Identities = 105/207 (50%), Positives = 144/207 (69%), Gaps = 1/207 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLGV +RW+A +Y L+ ED+KIRE+L +L++AG++ I IER
Sbjct: 1 MGQKINPHGFRLGVTTDHKTRWYAE-KQYAELVGEDVKIREWLHKNLERAGLSSIEIERR 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ I +Y+ARPG++IG+ G + E++R +L +T +I L++ EV PE +A L+AQ I
Sbjct: 60 SERVTIFLYAARPGIVIGRNGAEAERVRGELEKLTGKQIQLNILEVKSPETDAQLVAQGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++A QSAM GA G+++ SGRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLAARVAFRRAMRKAQQSAMNAGALGIRIKCSGRLGGAEMSRSEGYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207
IDYG A T +G G+KV++ D
Sbjct: 180 DIDYGFFEARTTFGRIGVKVWIYKGDV 206
>gi|34811531|pdb|1PNS|C Chain C, Crystal Structure Of A Streptomycin Dependent Ribosome
From E. Coli, 30s Subunit Of 70s Ribosome. This File,
1pns, Contains The 30s Subunit, Two Trnas, And One Mrna
Molecule. The 50s Ribosomal Subunit Is In File 1pnu.
gi|34811587|pdb|1PNX|C Chain C, Crystal Structure Of The Wild Type Ribosome From E. Coli,
30s Subunit Of 70s Ribosome. This File, 1pnx, Contains
Only Molecules Of The 30s Ribosomal Subunit. The 50s
Subunit Is In The Pdb File 1pny.
gi|56966325|pdb|1VOQ|C Chain C, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966378|pdb|1VOS|C Chain C, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966431|pdb|1VOV|C Chain C, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966484|pdb|1VOX|C Chain C, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966537|pdb|1VOZ|C Chain C, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|300508607|pdb|3MR8|C Chain C, Recognition Of The Amber Stop Codon By Release Factor Rf1.
This Entry 3mr8 Contains 30s Ribosomal Subunit. The 50s
Ribosomal Subunit Can Be Found In Pdb Entry 3ms1.
Molecule B In The Same Asymmetric Unit Is Deposited As
3mrz (50s) And 3ms0 (30s).
gi|300508662|pdb|3MS0|C Chain C, Recognition Of The Amber Stop Codon By Release Factor Rf1.
This Entry 3ms0 Contains 30s Ribosomal Subunit. The 50s
Ribosomal Subunit Can Be Found In Pdb Entry 3mrz.
Molecule A In The Same Asymmetric Unit Is Deposited As
3mr8 (30s) And 3ms1 (50s).
gi|322812552|pdb|3PYN|C Chain C, Crystal Structure Of A Complex Containing Domain 3 From
The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
File Contains The 30s Subunit Of The First 70s Ribosome.
gi|322812605|pdb|3PYQ|C Chain C, Crystal Structure Of A Complex Containing Domain 3 From
The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
File Contains The 30s Subunit Of The Second 70s
Ribosome.
gi|322812658|pdb|3PYS|C Chain C, Crystal Structure Of A Complex Containing Domain 3 Of Crpv
Igr Ires Rna Bound To The 70s Ribosome. This File
Contains The 30s Subunit Of The First 70s Ribosome.
gi|322812711|pdb|3PYU|C Chain C, Crystal Structure Of A Complex Containing Domain 3 Of Crpv
Igr Ires Rna Bound To The 70s Ribosome. This File
Contains The 30s Subunit Of The Second 70s Ribosome
Length = 206
Score = 251 bits (640), Expect = 7e-65, Method: Composition-based stats.
Identities = 100/206 (48%), Positives = 138/206 (66%)
Query: 2 GQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTH 61
G KI+PI FRLG+ W SRW+A +Y LL ED +IR L+ L AG+A++ IER
Sbjct: 1 GNKIHPIGFRLGITRDWESRWYAGKKQYRHLLLEDQRIRGLLEKELYSAGLARVDIERAA 60
Query: 62 KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIA 121
N + V+ A+PG++IG+ G I +R++L+ +T + L+V EV P ++A L+AQ +A
Sbjct: 61 DNVAVTVHVAKPGVVIGRGGERIRVLREELAKLTGKNVALNVQEVQNPNLSAPLVAQRVA 120
Query: 122 QQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH 181
+Q+ERR RRA+K+AVQ M GA G KVI SGR+ GAE +RTE +GRVPL TLRA+
Sbjct: 121 EQIERRFAVRRAIKQAVQRVMESGAKGAKVIVSGRIGGAEQARTEWAAQGRVPLHTLRAN 180
Query: 182 IDYGTAVAETAYGSCGIKVYVSLRDE 207
IDYG A+A T YG G+K Y+ L +
Sbjct: 181 IDYGFALARTTYGVLGVKAYIFLGEV 206
>gi|314929566|gb|EFS93397.1| ribosomal protein S3 [Propionibacterium acnes HL044PA1]
gi|328906224|gb|EGG25999.1| 30S ribosomal protein S3 [Propionibacterium sp. P08]
Length = 269
Score = 251 bits (640), Expect = 7e-65, Method: Composition-based stats.
Identities = 105/207 (50%), Positives = 145/207 (70%), Gaps = 1/207 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLGV +RW+A +Y L+ ED+KIR++LQ +L++AG++ I IER
Sbjct: 1 MGQKINPHGFRLGVTTDHKTRWYAE-KQYAELVGEDVKIRKWLQKNLERAGLSSIEIERR 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ I +Y+ARPG++IG+ G + E++R +L +T +I L++ EV PE +A L+AQ I
Sbjct: 60 SERVTIFLYAARPGIVIGRNGAEAERVRGELEKLTGKQIQLNILEVKTPETDAQLVAQGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++A QSAM GA G+++ SGRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLAARVAFRRAMRKAQQSAMNAGALGIRIKCSGRLGGAEMSRSEGYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207
IDYG A T +G G+KV++ D
Sbjct: 180 DIDYGFFEARTTFGRIGVKVWIYKGDV 206
>gi|313836027|gb|EFS73741.1| ribosomal protein S3 [Propionibacterium acnes HL037PA2]
gi|314970549|gb|EFT14647.1| ribosomal protein S3 [Propionibacterium acnes HL037PA3]
Length = 277
Score = 251 bits (640), Expect = 7e-65, Method: Composition-based stats.
Identities = 105/207 (50%), Positives = 145/207 (70%), Gaps = 1/207 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLGV +RW+A +Y L+ ED+KIR++LQ +L++AG++ I IER
Sbjct: 1 MGQKINPHGFRLGVTTDHKTRWYAE-KQYAELVGEDVKIRKWLQKNLERAGLSSIEIERR 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ I +Y+ARPG++IG+ G + E++R +L +T +I L++ EV PE +A L+AQ I
Sbjct: 60 SERVTIFLYAARPGIVIGRNGAEAERVRGELEKLTGKQIQLNILEVKTPETDAQLVAQGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++A QSAM GA G+++ SGRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLAARVAFRRAMRKAQQSAMNAGALGIRIKCSGRLGGAEMSRSEGYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207
IDYG A T +G G+KV++ D
Sbjct: 180 DIDYGFFEARTTFGRIGVKVWIYKGDV 206
>gi|28377838|ref|NP_784730.1| 30S ribosomal protein S3 [Lactobacillus plantarum WCFS1]
gi|300767827|ref|ZP_07077737.1| 30S ribosomal protein S3 [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|308180017|ref|YP_003924145.1| 30S ribosomal protein S3 [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|38258338|sp|Q88XY0|RS3_LACPL RecName: Full=30S ribosomal protein S3
gi|28270671|emb|CAD63577.1| ribosomal protein S3 [Lactobacillus plantarum WCFS1]
gi|300494812|gb|EFK29970.1| 30S ribosomal protein S3 [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|308045508|gb|ADN98051.1| 30S ribosomal protein S3 [Lactobacillus plantarum subsp. plantarum
ST-III]
Length = 217
Score = 251 bits (640), Expect = 7e-65, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 146/215 (67%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+G+ W ++W+A ++ A L+EDL+IR+Y++ L A V+ + IER
Sbjct: 1 MGQKVNPTGLRVGIIRDWEAKWYAE-KDFAAYLNEDLRIRKYIEQRLADASVSTVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK G+++E +RK+L+N+T +H+++ E+ KP+++A L+ +SI
Sbjct: 60 ANRVNISIHTAKPGMVIGKGGSEVEALRKELNNLTGKRVHINIIEIKKPDLDAKLVGESI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRAM+ A+Q MR GA G+K +GRLNGA++SR E Y +G VPL TLRA
Sbjct: 120 ARQLEGRVAFRRAMRGAMQRTMRSGAKGIKTQVAGRLNGADMSRVEAYSDGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDY A T YG G+K ++ + + + S
Sbjct: 180 DIDYSWVEARTTYGKLGVKTWIYRGEILPEKKSAK 214
>gi|153812870|ref|ZP_01965538.1| hypothetical protein RUMOBE_03277 [Ruminococcus obeum ATCC 29174]
gi|149831082|gb|EDM86171.1| hypothetical protein RUMOBE_03277 [Ruminococcus obeum ATCC 29174]
gi|295109483|emb|CBL23436.1| SSU ribosomal protein S3P [Ruminococcus obeum A2-162]
Length = 218
Score = 251 bits (640), Expect = 7e-65, Method: Composition-based stats.
Identities = 99/211 (46%), Positives = 144/211 (68%), Gaps = 1/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+SRW+A +++ L ED IR +L+ L AGV+KI IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWYAE-ADFADYLVEDYNIRTFLKKKLYSAGVSKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+II+Y+A+PG++IGK G++IEK++ +L T+ ++ + + EV +P+ +A L+A++I
Sbjct: 60 SDRVKIIIYTAKPGIVIGKGGSEIEKVKAELQKYTDKKLIVDIKEVKRPDRDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE R+ FRRAMK +Q M+ GA G+K SGRL GA+++RTE Y EG +PLQTLRA
Sbjct: 120 ALQLENRISFRRAMKSTMQRTMKAGAKGIKTSVSGRLGGADMARTEFYSEGTIPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYG A A+T YG G+K +V + +
Sbjct: 180 DIDYGFAEADTTYGKVGVKAWVYNGEVLPTK 210
>gi|116493157|ref|YP_804892.1| SSU ribosomal protein S3P [Pediococcus pentosaceus ATCC 25745]
gi|122265379|sp|Q03EC2|RS3_PEDPA RecName: Full=30S ribosomal protein S3
gi|116103307|gb|ABJ68450.1| SSU ribosomal protein S3P [Pediococcus pentosaceus ATCC 25745]
Length = 223
Score = 251 bits (640), Expect = 7e-65, Method: Composition-based stats.
Identities = 93/221 (42%), Positives = 146/221 (66%), Gaps = 1/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FR+GV W ++W+A ++ L ED+KIRE++ L A V+ + IER
Sbjct: 1 MGQKVNPNGFRVGVIRDWQAKWYAD-KDFSKFLAEDIKIREFIAKQLTDASVSTVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK G+++EK+R +L+ +T +H+++ E+ KP++ A L+ ++I
Sbjct: 60 ANRVNISIHTAKPGMVIGKGGSEVEKLRNQLNQLTGKRVHINIVEIKKPDLEAKLVGENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE RV FRRAMK+A+Q +MR GA G+K +GRLNGA++SR E Y EG+VPL TLRA
Sbjct: 120 AAQLEGRVAFRRAMKQAMQRSMRSGAKGIKTQVAGRLNGADMSRVERYSEGKVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
+DY A T YG G+K ++ + + + ++ +
Sbjct: 180 DVDYAWVEARTTYGQLGVKTWIYRGEILPEVKDAKKNSKEQ 220
>gi|87124968|ref|ZP_01080815.1| 30S ribosomal protein S3 [Synechococcus sp. RS9917]
gi|86167288|gb|EAQ68548.1| 30S ribosomal protein S3 [Synechococcus sp. RS9917]
Length = 243
Score = 251 bits (640), Expect = 7e-65, Method: Composition-based stats.
Identities = 96/229 (41%), Positives = 139/229 (60%), Gaps = 6/229 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KI+P RLG+ SRW+A Y LL ED +IR+++ AG++++LI R
Sbjct: 1 MGHKIHPTGLRLGITQEHRSRWYASSRNYPTLLQEDDRIRKFIHKKYGAAGISEVLIARK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117
+ + +ARPG+++G++G+ IE++R + ++ ++V EV + + +A L+A
Sbjct: 61 ADQLEVELKTARPGVLVGRQGSGIEELRSGIQKTVGDLSRQVRINVVEVERVDADAFLLA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ IAQQLE+RV FRR ++ AVQ A R G G+K+ SGRLNGAE++RTE EGRVPL T
Sbjct: 121 EYIAQQLEKRVAFRRTIRMAVQRAQRAGVLGLKIQVSGRLNGAEIARTEWTREGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSD---SDSTIPAAEHRVV 223
LRA IDY T VA T YG GIKV+V + + D + A R
Sbjct: 181 LRADIDYATKVASTTYGVLGIKVWVFKGEVLGDEARQQLPVGATPRRRA 229
>gi|303328088|ref|ZP_07358527.1| ribosomal protein S3 [Desulfovibrio sp. 3_1_syn3]
gi|302861914|gb|EFL84849.1| ribosomal protein S3 [Desulfovibrio sp. 3_1_syn3]
Length = 213
Score = 251 bits (640), Expect = 7e-65, Method: Composition-based stats.
Identities = 110/208 (52%), Positives = 148/208 (71%), Gaps = 1/208 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG N W SRWF+ EY A ++ED KIR +++ L AG++KI IER
Sbjct: 1 MGQKVHPFGFRLGYNKNWQSRWFS-KKEYPAFVYEDSKIRAFVKKLLYHAGLSKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+I+ +ARPG++IG+KG +IEK+R L E L VNE+ +PE++A L+A++I
Sbjct: 60 GGKVRLILSTARPGIVIGRKGVEIEKLRGDLRQKFGREFSLEVNEIRRPEVDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKR V A +FG +G+KV +GRL GAE++RTE Y +GRVPLQTLRA
Sbjct: 120 AQQLERRVAFRRAMKRTVSMARKFGGEGIKVTCAGRLAGAEIARTEWYRDGRVPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
ID+G A A T YG G+KV++ + +
Sbjct: 180 DIDFGFAEARTTYGIIGVKVWIYKGEIL 207
>gi|229823529|ref|ZP_04449598.1| hypothetical protein GCWU000282_00827 [Catonella morbi ATCC 51271]
gi|229786973|gb|EEP23087.1| hypothetical protein GCWU000282_00827 [Catonella morbi ATCC 51271]
Length = 218
Score = 251 bits (640), Expect = 8e-65, Method: Composition-based stats.
Identities = 94/216 (43%), Positives = 146/216 (67%), Gaps = 1/216 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+GV W+++W+A + LHEDL IR++L LK+A V+ I IER
Sbjct: 1 MGQKVHPIGMRVGVIRDWDAKWYAD-KNFAEYLHEDLAIRKFLYKKLKEASVSNIQIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ V++A+PG++IGK G++I+ +R +LS +T ++ ++V E+ +P ++A L+A+ I
Sbjct: 60 ANRVIVSVHTAKPGMVIGKGGSEIDAVRAELSKLTGKKVFINVVEIKEPSLDAKLVAEDI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRA K+A+Q M+ GA G+K + SGRLNGA+++R+E Y EG VPL TLR+
Sbjct: 120 ARQLENRVAFRRAQKQAIQRTMKAGAQGIKTMVSGRLNGADIARSEAYSEGTVPLHTLRS 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
IDY A+T YG G+KV++ + ++
Sbjct: 180 DIDYAWEEADTTYGKLGVKVWICRGQVLPQKKNSEK 215
>gi|239636227|ref|ZP_04677231.1| ribosomal protein S3 [Staphylococcus warneri L37603]
gi|239598243|gb|EEQ80736.1| ribosomal protein S3 [Staphylococcus warneri L37603]
gi|330685147|gb|EGG96811.1| ribosomal protein S3 [Staphylococcus epidermidis VCU121]
Length = 218
Score = 251 bits (640), Expect = 8e-65, Method: Composition-based stats.
Identities = 97/219 (44%), Positives = 151/219 (68%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI R+G+ W ++W+A ++ +LLHEDLKIR+++ LK+A V+ + IER
Sbjct: 1 MGQKINPIGLRVGIIRDWEAKWYAE-KDFASLLHEDLKIRKFIDNELKEASVSHVDIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++ +PG++IGK G++I+K+R KL+ +T+ ++H++V E+ K +I+A L+A++I
Sbjct: 60 ANRINIAIHTGKPGMVIGKGGSEIDKLRNKLNALTDKKVHINVIEIKKIDIDARLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R FRR K+A+ AM+ GA G+K SGRL GA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLENRASFRRVQKQAITRAMKLGAKGIKTQVSGRLGGADIARAEQYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDY A A+T YG G+KV++ + + + +T +
Sbjct: 180 DIDYAHAEADTTYGKLGVKVWIYRGEVLPTTKNTSEGGK 218
>gi|300857240|ref|YP_003782224.1| 30S ribosomal protein S3 [Clostridium ljungdahlii DSM 13528]
gi|300437355|gb|ADK17122.1| 30S ribosomal protein S3 [Clostridium ljungdahlii DSM 13528]
Length = 223
Score = 251 bits (640), Expect = 8e-65, Method: Composition-based stats.
Identities = 94/223 (42%), Positives = 141/223 (63%), Gaps = 1/223 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+GV W+++W+A + + ED KIR++++ AGV+KI IER
Sbjct: 1 MGQKVHPHGLRVGVIKEWDAKWYADKKNFADNIVEDNKIRKFVKEKTAIAGVSKIQIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-TNSEIHLSVNEVPKPEINATLIAQS 119
K ++ V++A+PG+IIGK G I ++ ++ M T + +++ EV + E +A L+A++
Sbjct: 61 AKRVKLNVFTAKPGMIIGKGGQGINALKAEIQKMVTEKTVLINIVEVKQAEADAQLMAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
+A QLE+R+ FRRAMK+ +Q AM+ G GVK SGRL GAE++R E Y EG +PLQTLR
Sbjct: 121 VALQLEKRISFRRAMKQTIQRAMKSGVKGVKTTCSGRLGGAEIARAESYHEGTIPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
A IDYG A A T YG G+KV+V + + E +
Sbjct: 181 ADIDYGFAEANTTYGKIGVKVWVYRGEVLPAKKPVENKEEVKA 223
>gi|297192697|ref|ZP_06910095.1| 30S ribosomal protein S3 [Streptomyces pristinaespiralis ATCC
25486]
gi|197721648|gb|EDY65556.1| 30S ribosomal protein S3 [Streptomyces pristinaespiralis ATCC
25486]
Length = 276
Score = 250 bits (639), Expect = 8e-65, Method: Composition-based stats.
Identities = 96/227 (42%), Positives = 153/227 (67%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FRLG+ + SRW+A Y + ED+ IR + +++AG++K+ IERT
Sbjct: 1 MGQKVNPHGFRLGITTDFKSRWYAD-KLYKDYVKEDVAIRRMMTSGMERAGISKVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++G + ++IR L +T ++ L++ EV PE++A L+AQ++
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGAEADRIRGDLEKLTGKQVQLNILEVKNPEVDAQLVAQAV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++++QSAM+ GA G+K+ GRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLSSRVSFRRAMRKSMQSAMKAGAKGIKIQCGGRLGGAEMSRSEFYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
+++YG A+T +G G+KV++ D + ++ A R + +
Sbjct: 180 NVEYGFFEAKTTFGRIGVKVWIYKGDVKNIAEVRAENAAARAGNRPA 226
>gi|57504692|ref|ZP_00370770.1| ribosomal protein S3 [Campylobacter coli RM2228]
gi|305432604|ref|ZP_07401765.1| 30S ribosomal protein S3 [Campylobacter coli JV20]
gi|57019461|gb|EAL56156.1| ribosomal protein S3 [Campylobacter coli RM2228]
gi|304444315|gb|EFM36967.1| 30S ribosomal protein S3 [Campylobacter coli JV20]
Length = 233
Score = 250 bits (639), Expect = 8e-65, Method: Composition-based stats.
Identities = 108/232 (46%), Positives = 156/232 (67%), Gaps = 6/232 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N W SRWF + + ED KIR +L+ L AG+++IL+ERT
Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPTKANLVENIGEDYKIRAFLKRKLYYAGISQILVERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ V +ARPG+IIGKKG+D++ +RK+L ++ ++++++ E K +A L A+S+
Sbjct: 61 AKKLRVTVVAARPGIIIGKKGSDVDNLRKELQDLIGKDVNINIKEERKAGASAQLAAESV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+R+ FRRAMK+ +Q A + GA G+KV SGRL GAE++RTE YLEGRVPL TLRA
Sbjct: 121 ATQLEKRIAFRRAMKKVIQGAQKAGAKGIKVSVSGRLGGAEMARTEWYLEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV------SDSDSTIPAAEHRVVEKD 226
IDYG A A T YG+ G+KV++ + + ++ + PA + R +
Sbjct: 181 KIDYGFAEARTTYGNIGVKVWIFKGEVLQKGLQTEKTEESAPAKKQRRTRRS 232
>gi|223042333|ref|ZP_03612382.1| ribosomal protein S3 [Staphylococcus capitis SK14]
gi|314934291|ref|ZP_07841650.1| ribosomal protein S3 [Staphylococcus caprae C87]
gi|222443996|gb|EEE50092.1| ribosomal protein S3 [Staphylococcus capitis SK14]
gi|313652221|gb|EFS15984.1| ribosomal protein S3 [Staphylococcus caprae C87]
Length = 217
Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats.
Identities = 98/214 (45%), Positives = 150/214 (70%), Gaps = 1/214 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI R+GV W ++W+A ++ +LLHEDLKIR+++ LK+A V+ + IER
Sbjct: 1 MGQKINPIGLRVGVIRDWEAKWYAE-KDFASLLHEDLKIRKFIDKELKEASVSHVDIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++ +PG++IGK G++IEK+R KL+ +T+ ++H++V E+ K +I+A L+A++I
Sbjct: 60 ANRINIAIHTGKPGMVIGKGGSEIEKLRNKLNALTDKKVHINVIEIKKVDIDARLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R FRR K+A+ AM+ GA G+K SGRL GA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLENRASFRRVQKQAITRAMKLGAKGIKTQVSGRLGGADIARAEQYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
IDY A A+T YG G+KV++ + + +++
Sbjct: 180 DIDYAHAEADTTYGKLGVKVWIYRGEVLPTKNTS 213
>gi|32491298|ref|NP_871552.1| hypothetical protein WGLp549 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|30173138|sp|Q8D206|RS3_WIGBR RecName: Full=30S ribosomal protein S3
gi|25166505|dbj|BAC24695.1| rpsC [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 236
Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats.
Identities = 109/227 (48%), Positives = 161/227 (70%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP RLG+ +W+S W+A E+ L D K+RE+L+ L +A V+K++IER
Sbjct: 1 MGQKVNPNGIRLGIIKSWSSTWYANTKEFSKNLISDFKVREFLKKSLSKAYVSKLIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ RI +Y+ARPG++IG+KG D++K+RK++SN+T +S+ E+ +PE++A L++++I
Sbjct: 61 AKSIRINIYTARPGIVIGRKGEDVDKLRKEISNITGVPAQISITEIKRPELDAKLVSENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR++FRRAMKRAVQ+A+R GA G+KV SGRL GAE++R E Y EGRVPL T RA
Sbjct: 121 ASQLERRIMFRRAMKRAVQNAIRLGAKGIKVEVSGRLGGAEIARKEWYREGRVPLHTFRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDY T+ A T YG G+KV + + + +S I ++ +K +
Sbjct: 181 DIDYNTSEAHTTYGIIGVKVTIFKGEILGNSSPYINEKKYMPTKKGN 227
>gi|227888847|ref|ZP_04006652.1| 30S ribosomal protein S3 [Lactobacillus johnsonii ATCC 33200]
gi|227850684|gb|EEJ60770.1| 30S ribosomal protein S3 [Lactobacillus johnsonii ATCC 33200]
Length = 222
Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats.
Identities = 98/221 (44%), Positives = 148/221 (66%), Gaps = 2/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLGVN W ++W+A Y L+EDL+IR+++ L A V+ + IER
Sbjct: 1 MGQKINPNGFRLGVNRGWEAKWYAD-KNYADTLNEDLRIRKFISEKLADASVSTVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK G ++E +RK+LS +TN +H+++ E+ KP+++A L+ + I
Sbjct: 60 ANRINISIHTAKPGMVIGKGGKEVEALRKQLSALTNKNVHINIVEIKKPDLDAKLVGEGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRA ++A Q +MR GA G+KV +GRLNGA+++R E + EG VPL TLRA
Sbjct: 120 ARQLEARIAFRRATRQATQRSMRSGAKGIKVQTAGRLNGADMARREWHTEGSVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
IDY A T YG G+KV+++ E+ P+ + +
Sbjct: 180 DIDYAWVEAATTYGQIGVKVWINRG-EILPQRKNKPSKKAK 219
>gi|253580625|ref|ZP_04857889.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251847996|gb|EES75962.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 218
Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats.
Identities = 99/211 (46%), Positives = 143/211 (67%), Gaps = 1/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+SRW+A +++ L ED IR +L+ L AGV+KI IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWYAD-ADFADYLVEDYNIRTFLKKKLYSAGVSKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+II+Y+A+PG++IGK G +IEK++ +L T+ ++ + + EV +P+ +A L+A++I
Sbjct: 60 SDRVKIIIYTAKPGIVIGKGGAEIEKVKAELKKFTDKKLIVDIKEVKRPDKDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE R+ FRRAMK +Q M+ GA G+K SGRL GA+++RTE Y EG +PLQTLRA
Sbjct: 120 ALQLENRISFRRAMKSTMQRTMKAGAKGIKTSVSGRLGGADMARTEFYSEGTIPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYG A A+T YG G+K +V + +
Sbjct: 180 DIDYGFAEADTTYGKVGVKAWVYNGEVLPTK 210
>gi|73661978|ref|YP_300759.1| 30S ribosomal protein S3 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|91207843|sp|Q49ZG2|RS3_STAS1 RecName: Full=30S ribosomal protein S3
gi|72494493|dbj|BAE17814.1| 30S ribosomal protein S3 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 217
Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats.
Identities = 97/214 (45%), Positives = 150/214 (70%), Gaps = 1/214 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI R+GV W ++W+A ++ +LLHEDLKIR+Y+ L++A V+ + IER
Sbjct: 1 MGQKINPIGLRVGVIRDWEAKWYAE-KDFASLLHEDLKIRKYIDNALQEASVSHVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++ +PG++IGK G++IEK+R KL+++TN ++H++V E+ K +++A L+A++I
Sbjct: 60 ANRINIAIHTGKPGMVIGKGGSEIEKLRNKLNSLTNKKVHINVIEIKKVDLDAKLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R FRR K+A+ AM+ GA G+K SGRL GA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLENRASFRRVQKQAITRAMKIGAKGIKTQVSGRLGGADIARAEQYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
I Y A A+T YG G+KV++ + + +++
Sbjct: 180 DIGYAHAEADTTYGKLGVKVWIYRGEVLPTKNTS 213
>gi|218885193|ref|YP_002434514.1| 30S ribosomal protein S3 [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|226697699|sp|B8DNA2|RS3_DESVM RecName: Full=30S ribosomal protein S3
gi|218756147|gb|ACL07046.1| ribosomal protein S3 [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 213
Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats.
Identities = 107/208 (51%), Positives = 145/208 (69%), Gaps = 1/208 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG N W SRWF+ EY + ED IR++++ L AG++KI IER
Sbjct: 1 MGQKVHPYGFRLGYNKNWQSRWFS-KKEYPGFVFEDHNIRKFVKKTLYHAGLSKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+I+ +ARPG++IG+KG +IEK+R L E + VNE+ +PE+ A L+A++I
Sbjct: 60 GGKVRLILSTARPGIVIGRKGVEIEKLRGDLRKKFKREFSIEVNEIRRPEVEAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV FRRAMKR V + +FGA+G+KV SGRL GAE++RTE Y +GRVPLQTLRA
Sbjct: 120 ALQLERRVAFRRAMKRTVSMSRKFGAEGIKVTCSGRLAGAEIARTEWYRDGRVPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
ID+G A A T YG G+KV++ + +
Sbjct: 180 DIDFGFAEARTTYGVIGVKVWIFKGEIL 207
>gi|323342795|ref|ZP_08083027.1| 30S ribosomal protein S3 [Erysipelothrix rhusiopathiae ATCC 19414]
gi|322463907|gb|EFY09101.1| 30S ribosomal protein S3 [Erysipelothrix rhusiopathiae ATCC 19414]
Length = 258
Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats.
Identities = 95/221 (42%), Positives = 143/221 (64%), Gaps = 2/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+GV W SRW+A ++ LLHED IR+Y+ +LK A V+++ IER+
Sbjct: 1 MGQKVHPIGMRVGVIRDWESRWYAE-KDFANLLHEDKLIRDYIFKNLKDAYVSRVEIERS 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-TNSEIHLSVNEVPKPEINATLIAQS 119
II+ +ARPG++IG G +IEK++K ++ + + +++ V EV P+++A L+A++
Sbjct: 60 KNRVDIIIRTARPGVVIGVNGANIEKVKKDIAKISEGNTVNIKVLEVANPDLDAHLVARN 119
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA+QLE+R FR A KR +Q MR GA G+K SGRL GA+++R+E Y EG VPL TLR
Sbjct: 120 IAEQLEQRASFRTAQKRTIQRTMRAGAKGIKTAVSGRLGGADMARSEGYSEGIVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
+ IDY A T +G G+KV++ + + P A
Sbjct: 180 SDIDYAHYEANTQFGILGVKVWICRGEVLPGQKVQEPEAPK 220
>gi|206889473|ref|YP_002249239.1| ribosomal protein S3 [Thermodesulfovibrio yellowstonii DSM 11347]
gi|226697770|sp|B5YG41|RS3_THEYD RecName: Full=30S ribosomal protein S3
gi|206741411|gb|ACI20468.1| ribosomal protein S3 [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 216
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 107/211 (50%), Positives = 151/211 (71%), Gaps = 1/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ TW SRWFA Y L EDLK+R+ L+ L AG++KI IER
Sbjct: 1 MGQKTNPIGNRLGIIRTWESRWFA-KKGYADQLIEDLKLRKMLKDKLYHAGISKIEIERV 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ R+++++ARPG+IIGKKG ++E+++K++ T + ++ + EV +PE++A L+A+++
Sbjct: 60 GEKVRVLIFAARPGIIIGKKGAEVERLKKEVEEKTGKQANIEIKEVRRPELDAQLVAENV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A Q+E+RV +RRAMKRAV S+MRFGA G+KV +GRL GAE++RTE Y EGRVPL T RA
Sbjct: 120 ALQIEKRVAYRRAMKRAVASSMRFGAKGIKVSCAGRLAGAEIARTEWYREGRVPLSTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYG A A+T YG G+KV++ +
Sbjct: 180 DIDYGFAEAKTTYGIIGVKVWIFKGEVQPGQ 210
>gi|313673461|ref|YP_004051572.1| SSU ribosomal protein s3p [Calditerrivibrio nitroreducens DSM
19672]
gi|312940217|gb|ADR19409.1| SSU ribosomal protein S3P [Calditerrivibrio nitroreducens DSM
19672]
Length = 219
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 111/219 (50%), Positives = 159/219 (72%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +PI R+G+N TW S W+A +Y L ED+KIR+YL+ L QAG++ I IER
Sbjct: 1 MGQKAHPIGLRIGINKTWKSVWYANKRDYRKNLSEDIKIRKYLKKKLNQAGISSIEIERM 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ R+ + ++RPG++IGKKG +I+K+++ L TN+++ +++ EV KPEI+ATLIA++I
Sbjct: 61 GQKMRVNLNTSRPGIVIGKKGAEIDKLKQDLKAYTNADVQINIREVKKPEIDATLIAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A Q+ERR+ FRRAMK+AV A++ GA G+KV SGRL GA+++RTE Y++GRVPLQTLRA
Sbjct: 121 ALQIERRIAFRRAMKKAVVQALKSGALGIKVSCSGRLAGADMARTEWYIKGRVPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
IDYGTA A T YG G+KV+V + + + + E
Sbjct: 181 DIDYGTADAMTTYGIIGVKVWVFKGETLEEKNKNATEVE 219
>gi|290968238|ref|ZP_06559781.1| ribosomal protein S3 [Megasphaera genomosp. type_1 str. 28L]
gi|290781720|gb|EFD94305.1| ribosomal protein S3 [Megasphaera genomosp. type_1 str. 28L]
Length = 223
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 101/224 (45%), Positives = 152/224 (67%), Gaps = 2/224 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+N FR+GV W+++W+A +Y LL+ED+KIRE+L+ L AGV++I IER+
Sbjct: 1 MGQKVNAHGFRVGVVKPWDAKWYAE-KDYATLLNEDVKIREFLKKQLFIAGVSRIEIERS 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K ++I+++A+PG++IG+ G IE I+K L T+ + +++ E+ + E++ATL+A++I
Sbjct: 60 AKRIKLIIHTAKPGMVIGRGGAGIEDIKKALKRFTSKAVDVNIAEIKQAELDATLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR+ FRRAMK+ V MR GA G+K++ SGRL GAE++R+E +G +PL TLRA
Sbjct: 120 AGQLERRIGFRRAMKQCVGRTMRMGAKGIKIMCSGRLGGAEIARSESVRDGSIPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
IDYG A A T YG GIK ++ + E+ P + E
Sbjct: 180 DIDYGFAEAHTTYGCIGIKCWIY-KGEILPEAKQAPQKKREGSE 222
>gi|284053309|ref|ZP_06383519.1| 30S ribosomal protein S3 [Arthrospira platensis str. Paraca]
gi|291567790|dbj|BAI90062.1| 30S ribosomal protein S3 [Arthrospira platensis NIES-39]
Length = 242
Score = 250 bits (639), Expect = 1e-64, Method: Composition-based stats.
Identities = 104/226 (46%), Positives = 147/226 (65%), Gaps = 3/226 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+PI FRLGV SRWFA +Y LL ED IR+Y+Q +L AG++ + IER
Sbjct: 1 MGQKIHPIGFRLGVTQEHKSRWFADAGQYPQLLQEDYTIRQYIQKNLSNAGISDVRIERK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLIAQ 118
+ V +ARPG+++G+ GT I+ +R+ L +N +I ++V EV + + +ATLIA+
Sbjct: 61 ADQIDLEVLTARPGVVVGRGGTGIDSLRQGLQKELGSNRQIRINVVEVSRVDADATLIAE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
+IA QLE+RV FRR +++A+ A + G +G+K+ SGRLNGAE++RTE EGRVPL TL
Sbjct: 121 NIAAQLEKRVSFRRVVRQAITRAQKAGIEGIKIQVSGRLNGAEIARTEWTREGRVPLHTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
RA IDY A T YG G+KV+V + + + T PA R +
Sbjct: 181 RADIDYAYCTALTIYGILGVKVWVFKGEIIPGQEET-PAPNTRAPK 225
>gi|307244777|ref|ZP_07526878.1| ribosomal protein S3 [Peptostreptococcus stomatis DSM 17678]
gi|306491875|gb|EFM63927.1| ribosomal protein S3 [Peptostreptococcus stomatis DSM 17678]
Length = 264
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 107/223 (47%), Positives = 149/223 (66%), Gaps = 1/223 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARG-SEYGALLHEDLKIREYLQCHLKQAGVAKILIER 59
MGQK+NP R+GV W+SRWFA E+G L ED +R L+ L AG+AKI IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWFANDRKEFGEFLKEDHVLRTSLKKELYSAGLAKIEIER 60
Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
+ ++ ++ A+PG++IGK G IE ++K+L MT + L++ EV + +A L+A++
Sbjct: 61 SANKIKMDLHVAKPGVVIGKGGAGIEALKKRLETMTGKTVILNIIEVRNIDRDAQLVAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IAQ +ERR+ FRRAMK+AVQ M+ GA G+KV ASGRL GAE++RTE Y EG VPLQTLR
Sbjct: 121 IAQAIERRIAFRRAMKQAVQRTMKSGAKGIKVSASGRLGGAEMARTEGYSEGNVPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
+ IDYG A A+T YG GIKV++ + + + +I E +
Sbjct: 181 SDIDYGFAEADTTYGKIGIKVWICNGEILPGRNVSIEREEKKA 223
>gi|225850741|ref|YP_002730975.1| ribosomal protein S3 [Persephonella marina EX-H1]
gi|254764539|sp|C0QQM9|RS3_PERMH RecName: Full=30S ribosomal protein S3
gi|225646450|gb|ACO04636.1| ribosomal protein S3 [Persephonella marina EX-H1]
Length = 227
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 107/224 (47%), Positives = 160/224 (71%), Gaps = 1/224 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI FRLGV W S+WFA +YG LLHED+KIR++++ KQAG+A ++IER
Sbjct: 1 MGQKVHPIGFRLGVTKDWKSKWFADKKKYGQLLHEDVKIRKFVEERYKQAGIADVIIERL 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119
+ RI + +++PG++IG+KG ++E++ K L +TN ++ ++V+EV KPE+NA L+A+
Sbjct: 61 GEKVRIKILASKPGIVIGRKGAEVEELNKVLQAVTNAKDVTVNVDEVKKPELNAKLVAED 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA QLERRV RRAMKRA+ +AM+ GA G+KV GR+ G +L+R E ++ GR+PLQT+R
Sbjct: 121 IALQLERRVSHRRAMKRAIDNAMKAGAKGIKVQVGGRIGGVDLARKEWFMAGRMPLQTIR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223
A IDYGTA A T YG G+KV++ D++++ + +
Sbjct: 181 ADIDYGTARASTKYGILGVKVWIYKGDKLAEQKEEVLKKIEEEL 224
>gi|310829579|ref|YP_003961936.1| hypothetical protein ELI_4029 [Eubacterium limosum KIST612]
gi|308741313|gb|ADO38973.1| hypothetical protein ELI_4029 [Eubacterium limosum KIST612]
Length = 239
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 101/224 (45%), Positives = 153/224 (68%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+N R+GV WN++W+A ++ L ED IR+Y++ QAG++KI+IER
Sbjct: 1 MGQKVNAHGLRVGVIKDWNAKWYANDRDFADCLIEDHDIRKYIKASQFQAGISKIVIERF 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I +++A+PG+IIGK G IE +R +L MT + +++ EV +++A LIA++I
Sbjct: 61 GNKIKIHIHTAKPGMIIGKGGAGIEALRLELEKMTGKTVFINIVEVKNIDMDAQLIAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR+ FRRAMK+ +Q MR GA G+K + +GRLNGAE++RTE Y +G VP+QTLRA
Sbjct: 121 AGQLERRISFRRAMKQCMQRTMRAGAKGIKTMVAGRLNGAEMARTEGYAQGNVPMQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
+IDYG A A+T YG GIKV+V+ + ++ ++ + +E +
Sbjct: 181 NIDYGFAEADTTYGKLGIKVWVNKGEILTGRENILAVSEEEDSK 224
>gi|313828370|gb|EFS66084.1| ribosomal protein S3 [Propionibacterium acnes HL063PA2]
Length = 269
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 105/207 (50%), Positives = 144/207 (69%), Gaps = 1/207 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLGV +RW+A +Y L+ ED+KIRE+L +L++AG++ I IER
Sbjct: 1 MGQKINPHGFRLGVTTDHKTRWYAE-KQYAELVGEDVKIREWLHKNLERAGLSSIEIERR 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ I +Y+ARPG++IG+ G + E++R +L +T +I L++ EV PE +A L+AQ I
Sbjct: 60 SERVTIFLYAARPGIVIGRNGAEAERVRGELEKLTGKQIPLNILEVKSPETDAQLVAQGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++A QSAM GA G+++ SGRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLAARVAFRRAMRKAQQSAMNAGALGIRIKCSGRLGGAEMSRSEGYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207
IDYG A T +G G+KV++ D
Sbjct: 180 DIDYGFFEARTTFGRIGVKVWIYKGDV 206
>gi|257067054|ref|YP_003153310.1| 30S ribosomal protein S3 [Anaerococcus prevotii DSM 20548]
gi|256798934|gb|ACV29589.1| ribosomal protein S3 [Anaerococcus prevotii DSM 20548]
Length = 238
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 96/222 (43%), Positives = 147/222 (66%), Gaps = 1/222 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FR+GV W+S+WFA ++ LL ED IR+ ++ + AG++ I IER
Sbjct: 1 MGQKVNPKGFRVGVIKDWDSKWFADKKDFSDLLVEDYNIRKIVKKEVYDAGISDIEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-TNSEIHLSVNEVPKPEINATLIAQS 119
N +I V++ +PG++IGK G+ +E+++KKL + I ++V E+ +++A L+A++
Sbjct: 61 VNNLKITVFAGKPGMVIGKGGSGVEELKKKLEKVAPGRRIIINVEEIKYQDLSAQLVAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA QLE RV FRRAMK+++Q MR GA G+K + SGRL GA+++R+E Y EG +PLQTLR
Sbjct: 121 IANQLENRVAFRRAMKQSMQRTMRAGAKGIKTMVSGRLGGADMARSEGYSEGTIPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
A+IDYG A A+T YG G KV++ + + + +
Sbjct: 181 ANIDYGFAEADTEYGKIGCKVWIYKGEVLPGEKAQREPKMKQ 222
>gi|227894526|ref|ZP_04012331.1| 30S ribosomal protein S3 [Lactobacillus ultunensis DSM 16047]
gi|227863685|gb|EEJ71106.1| 30S ribosomal protein S3 [Lactobacillus ultunensis DSM 16047]
Length = 224
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 102/225 (45%), Positives = 153/225 (68%), Gaps = 1/225 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLGV W S+W+A Y L+EDL+IR+++ LK A V+ + IER
Sbjct: 1 MGQKINPNGFRLGVIRDWESKWYAD-KGYKENLNEDLRIRKFISEKLKDASVSTVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I +++A+PG++IGK G+++E +RK+L+ +T ++H+++ E+ KP+++A L+A I
Sbjct: 60 AKRINISIHTAKPGMVIGKGGSEVEALRKQLNALTGKQVHINIVEIKKPDLDAKLVADGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRAM++A Q AMR GA G+KV SGRLNGA+++R E + EGRVPLQTLRA
Sbjct: 120 ARQLEARIAFRRAMRQATQRAMRAGAKGIKVQTSGRLNGADMARREWHTEGRVPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY A T YG G++V+++ + + + + + K
Sbjct: 180 DIDYAWVNAFTTYGEIGVQVWINRGEILPTRKNKPASKPAKGGNK 224
>gi|314986059|gb|EFT30151.1| ribosomal protein S3 [Propionibacterium acnes HL005PA2]
Length = 269
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 105/207 (50%), Positives = 144/207 (69%), Gaps = 1/207 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLGV +RW+A +Y L+ ED+KIRE+L +L++AG++ I IER
Sbjct: 1 MGQKINPHGFRLGVTTDHKTRWYAE-KQYAELVGEDVKIREWLHKNLERAGLSSIEIERR 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ I +Y+ARPG++IG+ G + E++R +L +T +I L++ EV PE +A L+AQ I
Sbjct: 60 SERVTIFLYAARPGIVIGRNGAEPERVRGELEKLTGKQIQLNILEVKSPETDAQLVAQGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL RV FRRAM++A QSAM GA G+++ SGRL GAE+SR+E Y EGRVPL TLRA
Sbjct: 120 AEQLAARVAFRRAMRKAQQSAMNAGALGIRIKCSGRLGGAEMSRSEGYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207
IDYG A T +G G+KV++ D
Sbjct: 180 DIDYGFFEARTTFGRIGVKVWIYKGDV 206
>gi|283953688|ref|ZP_06371219.1| 30S ribosomal protein S3 [Campylobacter jejuni subsp. jejuni 414]
gi|283794729|gb|EFC33467.1| 30S ribosomal protein S3 [Campylobacter jejuni subsp. jejuni 414]
Length = 233
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 108/232 (46%), Positives = 157/232 (67%), Gaps = 6/232 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N W SRWF + + ED KIR +L+ L AG+++IL+ERT
Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPTKANLVENIGEDYKIRAFLKRKLYYAGISQILVERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ V +ARPG+IIGKKG+D++ +RK+L ++ + ++++++ E K +A L A+S+
Sbjct: 61 AKKLRVTVVAARPGIIIGKKGSDVDNLRKELQDLISKDVNINIKEERKAGASAQLAAESV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+R+ FRRAMK+ +Q A + GA G+KV SGRL GAE++RTE YLEGRVPL TLRA
Sbjct: 121 ATQLEKRIAFRRAMKKVIQGAQKAGAKGIKVSVSGRLGGAEMARTEWYLEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV------SDSDSTIPAAEHRVVEKD 226
IDYG A A T YG+ G+KV++ + + ++ + PA + R +
Sbjct: 181 KIDYGFAEARTTYGNIGVKVWIFKGEVLHKGMQPEKTEESTPAKKPRRTRRG 232
>gi|238853477|ref|ZP_04643855.1| ribosomal protein S3 [Lactobacillus gasseri 202-4]
gi|300362383|ref|ZP_07058559.1| 30S ribosomal protein S3 [Lactobacillus gasseri JV-V03]
gi|238833917|gb|EEQ26176.1| ribosomal protein S3 [Lactobacillus gasseri 202-4]
gi|300353374|gb|EFJ69246.1| 30S ribosomal protein S3 [Lactobacillus gasseri JV-V03]
Length = 222
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 97/221 (43%), Positives = 147/221 (66%), Gaps = 2/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLGVN W ++W+A Y L+EDL+IR+++ L A V+ + IER
Sbjct: 1 MGQKINPNGFRLGVNRDWEAKWYAD-KNYADTLNEDLRIRKFISEKLADASVSTVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK G ++E +RK+LS +T +H+++ E+ KP+++A L+ + I
Sbjct: 60 ANRINISIHTAKPGMVIGKGGKEVEALRKQLSALTKKNVHINIVEIKKPDLDAKLVGEGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRA ++A Q +MR GA G+KV +GRLNGA+++R E + EG VPL TLRA
Sbjct: 120 ARQLEARIAFRRATRQATQRSMRSGAKGIKVQTAGRLNGADMARREWHTEGSVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
IDY A T YG G+KV+++ E+ P+ + +
Sbjct: 180 DIDYAWVEAATTYGQIGVKVWINRG-EILPQRKNKPSKKAK 219
>gi|256830532|ref|YP_003159260.1| ribosomal protein S3 [Desulfomicrobium baculatum DSM 4028]
gi|256579708|gb|ACU90844.1| ribosomal protein S3 [Desulfomicrobium baculatum DSM 4028]
Length = 212
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 108/213 (50%), Positives = 149/213 (69%), Gaps = 1/213 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K++P FRLG N W SRWF+ Y + ED ++R+Y++ L AG++KI IER
Sbjct: 1 MGHKVHPYGFRLGYNKNWKSRWFSDKK-YAEYVFEDSRLRKYVKEKLFHAGISKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+I+++ARPG++IG+KG +IEK+R +L E + VNE+ +PE +A L+A+SI
Sbjct: 60 ADKVRLILFTARPGIVIGRKGVEIEKLRAELKGKFAREFVIEVNEIRRPETDAQLVAESI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRA+K+ + A +FGA G+KV GRL GAE++RTE EGRVPL TLRA
Sbjct: 120 AQQLERRVAFRRAIKKTLGMAQKFGALGIKVQCGGRLGGAEIARTEWAREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
IDYG A+A+T YG G+KV+V + +S+ DS
Sbjct: 180 DIDYGVALAKTTYGIIGVKVWVFKGEILSEVDS 212
>gi|153952472|ref|YP_001398980.1| 30S ribosomal protein S3 [Campylobacter jejuni subsp. doylei
269.97]
gi|171769460|sp|A7H650|RS3_CAMJD RecName: Full=30S ribosomal protein S3
gi|152939918|gb|ABS44659.1| ribosomal protein S3 [Campylobacter jejuni subsp. doylei 269.97]
Length = 233
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 107/226 (47%), Positives = 152/226 (67%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N W SRWF + + ED KIR +L+ L AG+++IL+ERT
Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPTKANLVENIGEDYKIRAFLKRKLYYAGISQILVERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ V +ARPG+IIGKKG+D++ +RK+L ++ + ++++++ E K +A L A+S+
Sbjct: 61 AKKLRVTVVAARPGIIIGKKGSDVDNLRKELQDLISKDVNINIKEERKAGASAQLAAESV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+R+ FRRAMK+ +Q A + GA G+KV SGRL GAE++RTE YLEGRVPL TLRA
Sbjct: 121 ATQLEKRIAFRRAMKKVIQGAQKAGAKGIKVSVSGRLGGAEMARTEWYLEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDYG A A T YG+ G+KV++ + + E +K
Sbjct: 181 KIDYGFAEARTTYGNIGVKVWIFKGEVLHKGMQPEKTEESAPAKKS 226
>gi|328951230|ref|YP_004368565.1| ribosomal protein S3 [Marinithermus hydrothermalis DSM 14884]
gi|328451554|gb|AEB12455.1| ribosomal protein S3 [Marinithermus hydrothermalis DSM 14884]
Length = 247
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 104/221 (47%), Positives = 141/221 (63%), Gaps = 1/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KINPI FRLG+ W SRW+A +Y ALL ED IRE + + G+A+I IER
Sbjct: 1 MGNKINPIGFRLGITRDWESRWYAGKKDYAALLVEDRIIRELITREVYHGGIARIDIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT-NSEIHLSVNEVPKPEINATLIAQS 119
N + V++A+PG+IIG+ G I+++R +L N I L+V EVP P ++A L+AQ
Sbjct: 61 ADNVSVTVHAAKPGVIIGRGGETIKRMRAELQKRFPNRTISLNVQEVPNPNLSAPLVAQR 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
+A+Q+ERR RRA+K+AVQ M GA G KV+ SGR+ GAE +RTE GRVPL TLR
Sbjct: 121 VAEQIERRFAVRRAIKQAVQRVMEAGAQGAKVVVSGRIGGAEQARTEWAALGRVPLHTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
A+IDYG A+A T YG G+K Y+ L + + + +
Sbjct: 181 ANIDYGFALAWTTYGVLGVKAYIFLGEVIGRQKTAAKPSPK 221
>gi|210135470|ref|YP_002301909.1| 30S ribosomal protein S3 [Helicobacter pylori P12]
gi|226697718|sp|B6JNF1|RS3_HELP2 RecName: Full=30S ribosomal protein S3
gi|210133438|gb|ACJ08429.1| 30S ribosomal protein S3 [Helicobacter pylori P12]
Length = 234
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 107/208 (51%), Positives = 149/208 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ RLG+N W SRWF + + ED KIR++L+ L AGV++I+IER
Sbjct: 1 MGQKVNPVGLRLGINRNWTSRWFPSARTAPSNIDEDNKIRKFLKKELYYAGVSEIVIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ V +ARPGLIIGKKG DIEK+++ L + E+ +++ EV +P+ +A L A+++
Sbjct: 61 AKKLRVTVVAARPGLIIGKKGVDIEKVKEGLKTLIKKEVSINIKEVKRPQADAQLAAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV FRRAMK+ +Q+A++ GA G+KV SGRL GAE++RTE Y+EGRVPL TLRA
Sbjct: 121 ATQLEKRVAFRRAMKKVMQAALKSGAKGIKVCVSGRLAGAEIARTEWYMEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
IDYG A A T YG G+KV++ + +
Sbjct: 181 KIDYGFAEAMTVYGIIGVKVWIFKGEVL 208
>gi|119484827|ref|ZP_01619309.1| 30S ribosomal protein S3 [Lyngbya sp. PCC 8106]
gi|119457645|gb|EAW38769.1| 30S ribosomal protein S3 [Lyngbya sp. PCC 8106]
Length = 242
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 105/220 (47%), Positives = 142/220 (64%), Gaps = 2/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP+ FRLG+ SRWFA Y LL ED KIR+Y+Q +L AG++ + IER
Sbjct: 1 MGQKINPVGFRLGITQEHKSRWFADAKHYPDLLQEDYKIRQYIQKNLSNAGISDVRIERK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLIAQ 118
+ V +ARPG+++G+ GT IE +R L N +I ++V EV + + +A LIA+
Sbjct: 61 ADQIDLEVLTARPGVVVGRGGTGIESLRVGLQKELGNNRQIRINVVEVARVDADARLIAE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
IAQQLE+RV FRR +++A+ A + G +G+KV SGRLNGAE++RTE EGRVPL TL
Sbjct: 121 YIAQQLEKRVSFRRVVRQAITRAQKAGVEGIKVQVSGRLNGAEIARTEWTREGRVPLHTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
RA IDY A T YG GIKV+V + + + T +A
Sbjct: 181 RADIDYAYCTALTIYGILGIKVWVFKGEIIPGQEETSNSA 220
>gi|254556023|ref|YP_003062440.1| 30S ribosomal protein S3 [Lactobacillus plantarum JDM1]
gi|254044950|gb|ACT61743.1| 30S ribosomal protein S3 [Lactobacillus plantarum JDM1]
Length = 217
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 147/215 (68%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+G+ W ++W+A ++ A L+EDL+IR+Y++ L A V+ + IER
Sbjct: 1 MGQKVNPTGLRVGIIRDWEAKWYAE-KDFAAYLNEDLRIRKYIEQRLADASVSTVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK G+++E +RK+L+N+T+ +H+++ E+ KP+++A L+ +SI
Sbjct: 60 ANRVNISIHTAKPGMVIGKGGSEVEALRKELNNLTSKRVHINIIEIKKPDLDAKLVGESI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRAM+ A+Q MR GA G+K +GRLNGA++SR E Y +G VPL TLRA
Sbjct: 120 ARQLEGRVAFRRAMRGAMQRTMRSGAKGIKTQVAGRLNGADMSRVEAYSDGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDY A T YG G+K ++ + + + S
Sbjct: 180 DIDYSWVEARTTYGKLGVKTWIYRGEILPEKKSAK 214
>gi|295398294|ref|ZP_06808336.1| 30S ribosomal protein S3 [Aerococcus viridans ATCC 11563]
gi|294973433|gb|EFG49218.1| 30S ribosomal protein S3 [Aerococcus viridans ATCC 11563]
Length = 216
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 102/217 (47%), Positives = 149/217 (68%), Gaps = 1/217 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI R+GV W++RW+A ++ LHEDL IREY+ LK A V+++ IER
Sbjct: 1 MGQKINPIGMRIGVIKDWDARWYAE-KDFADTLHEDLHIREYIAETLKDASVSQVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G++++ +RK L+N T ++H+++ E+ KPE++A L+ +SI
Sbjct: 60 ANKVNVNIHTAKPGMVIGKGGSEVDALRKTLNNRTGKKVHINIVEIKKPELDAKLVGESI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE RV FRRA K+A+Q M+ GA G+KV SGRLNGA+++R+E +EG VPL TLRA
Sbjct: 120 AQQLENRVAFRRAQKQAIQRTMKSGAKGIKVQISGRLNGADMARSETQVEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
IDY A+T YG GIK +V + + + A
Sbjct: 180 DIDYSWEEADTTYGKIGIKTWVCRGEILPTKNIQGEA 216
>gi|21672764|ref|NP_660831.1| 30S ribosomal protein S3 [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
gi|25009194|sp|Q8K956|RS3_BUCAP RecName: Full=30S ribosomal protein S3
gi|21623411|gb|AAM68042.1| 30S ribosomal protein S3 [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
Length = 233
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 110/224 (49%), Positives = 157/224 (70%), Gaps = 1/224 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS WFA ++ L D K+R++L L +A V++I+IER
Sbjct: 1 MGQKVHPNGMRLGIIKKWNSVWFANTKDFADHLDSDYKVRQFLMKKLVKASVSRIIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +Y+ARPG++IGKKG D+EK+R ++ +T ++++EV KPE++A L+++SI
Sbjct: 61 AKSIRVTIYTARPGIVIGKKGEDVEKLRINIAKITGVPAQINISEVRKPELDAKLVSESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV+FRRAMKR+VQ+AMR GA G+KV SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 121 TSQLERRVMFRRAMKRSVQNAMRQGAKGIKVEVSGRLGGAEIARREWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
+IDY + A T YG G+KV++ + E+ STI E ++
Sbjct: 181 NIDYSISEAHTTYGVIGVKVWIF-KGEILGGMSTIEKLEKSSIQ 223
>gi|153952867|ref|YP_001393632.1| 30S ribosomal protein S3 [Clostridium kluyveri DSM 555]
gi|219853532|ref|YP_002470654.1| hypothetical protein CKR_0189 [Clostridium kluyveri NBRC 12016]
gi|189044970|sp|A5N4Q3|RS3_CLOK5 RecName: Full=30S ribosomal protein S3
gi|254764524|sp|B9DYB5|RS3_CLOK1 RecName: Full=30S ribosomal protein S3
gi|146345748|gb|EDK32284.1| RpsC [Clostridium kluyveri DSM 555]
gi|219567256|dbj|BAH05240.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 223
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 94/223 (42%), Positives = 143/223 (64%), Gaps = 1/223 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+G+ W+++W+A + L ED KIR++++ AG++KI IER
Sbjct: 1 MGQKVHPHGLRVGIIKEWDAKWYADKKNFADNLVEDNKIRKFVKKKGAIAGISKIQIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-TNSEIHLSVNEVPKPEINATLIAQS 119
K ++ +++A+PG+IIGK G IE ++ +L + + I +++ EV E +A L+A++
Sbjct: 61 AKRIKLNIFTAKPGMIIGKGGQGIEALKTELKKIVPDKVILINIVEVKVAEADAQLMAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA QLE+R+ FRRAMK+ +Q AM+ G GVK SGRL GAE++R+E Y EG +PLQTLR
Sbjct: 121 IALQLEKRISFRRAMKQTIQRAMKSGIKGVKTTCSGRLGGAEIARSESYHEGTIPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
A IDYG A A+T YG G+KV+V + + E +
Sbjct: 181 ADIDYGFAEADTTYGKIGVKVWVYKGEVLPVKKPVENKEEAKA 223
>gi|223038386|ref|ZP_03608680.1| ribosomal protein S3 [Campylobacter rectus RM3267]
gi|222880243|gb|EEF15330.1| ribosomal protein S3 [Campylobacter rectus RM3267]
Length = 233
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 109/225 (48%), Positives = 152/225 (67%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N W SRWF + ED KIR +L+ L AGV++ILIERT
Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPAKGNLAENIGEDYKIRAFLKKKLYYAGVSQILIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ V +ARPG+IIGKKG+D+EK+++ + + N E+++++ E K + +A L A+++
Sbjct: 61 AKKIRVTVVAARPGIIIGKKGSDVEKLKEDIQKLINKEVNVNIKEERKAQASAQLAAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV FRRAMK+ +Q A + GA G+K+ +GRL GAE++RTE YLEGRVPL TLRA
Sbjct: 121 AMQLEKRVAFRRAMKKVIQGAQKSGAKGIKISVAGRLGGAEIARTEWYLEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDYG A A T YG+ GIKV++ + + E + +K
Sbjct: 181 KIDYGVAEAHTTYGNIGIKVWIFKGEVLQKGVQPEKNEEEKTDKK 225
>gi|227876209|ref|ZP_03994325.1| possible ribosomal protein S3 [Mobiluncus mulieris ATCC 35243]
gi|269976885|ref|ZP_06183859.1| ribosomal protein S3 [Mobiluncus mulieris 28-1]
gi|306819485|ref|ZP_07453192.1| 30S ribosomal protein S3 [Mobiluncus mulieris ATCC 35239]
gi|307701267|ref|ZP_07638289.1| ribosomal protein S3 [Mobiluncus mulieris FB024-16]
gi|227843170|gb|EEJ53363.1| possible ribosomal protein S3 [Mobiluncus mulieris ATCC 35243]
gi|269934716|gb|EEZ91276.1| ribosomal protein S3 [Mobiluncus mulieris 28-1]
gi|304647777|gb|EFM45095.1| 30S ribosomal protein S3 [Mobiluncus mulieris ATCC 35239]
gi|307613661|gb|EFN92908.1| ribosomal protein S3 [Mobiluncus mulieris FB024-16]
Length = 274
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 102/223 (45%), Positives = 151/223 (67%), Gaps = 4/223 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQK+NP FRLG+ SRWFA G Y + ED++IR ++ L++AG++K+
Sbjct: 1 MGQKVNPTGFRLGITTEHRSRWFADSTKPGQRYRDFVKEDVEIRRLMEEKLERAGISKVG 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT + +Y+ARPG++IG++G + +++R +L +T ++ L++ EV P+I+A L+
Sbjct: 61 IERTRDRVSVDLYTARPGIVIGRRGAEADRLRAQLEKLTGKQVQLNIREVKNPDIDAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQSIA+QL RV FRRAM++ +QSA+R GA G++V SGRL GAE+SR+E Y EGRVPL
Sbjct: 121 AQSIAEQLSARVSFRRAMRKGMQSALRGGAKGIRVQCSGRLGGAEMSRSEFYREGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
TLRA+IDYG A T +G G+KV++ D + + A +
Sbjct: 181 TLRANIDYGFFEARTTFGRIGVKVWIYKGDTTEREFARMQAEQ 223
>gi|260589273|ref|ZP_05855186.1| ribosomal protein S3 [Blautia hansenii DSM 20583]
gi|331082679|ref|ZP_08331802.1| 30S ribosomal protein S3 [Lachnospiraceae bacterium 6_1_63FAA]
gi|260540354|gb|EEX20923.1| ribosomal protein S3 [Blautia hansenii DSM 20583]
gi|330400298|gb|EGG79940.1| 30S ribosomal protein S3 [Lachnospiraceae bacterium 6_1_63FAA]
Length = 218
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 98/211 (46%), Positives = 142/211 (67%), Gaps = 1/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+S+W+A G ++ L ED IR YL+ L AGV+KI IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSKWYAEG-DFADNLVEDYNIRTYLKKKLYSAGVSKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+II+Y+A+PG++IGK G +IEK++ +L T+ ++ + + EV +P+ +A L+A++I
Sbjct: 60 SDRVKIIIYTAKPGVVIGKGGAEIEKVKVELQKFTDKKLVVDIKEVKRPDKDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE R+ FRRAMK + M+ GA G+K SGRL GA+++RTE Y EG +PLQTLRA
Sbjct: 120 ALQLENRISFRRAMKSTMSRTMKAGAKGIKTAVSGRLGGADMARTEFYSEGTIPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYG A A+T YG G+K ++ + +
Sbjct: 180 DIDYGFAEADTTYGKVGVKAWIYNGEVLPTK 210
>gi|15645926|ref|NP_208105.1| 30S ribosomal protein S3 [Helicobacter pylori 26695]
gi|2500397|sp|P56010|RS3_HELPY RecName: Full=30S ribosomal protein S3
gi|2314475|gb|AAD08352.1| ribosomal protein S3 (rps3) [Helicobacter pylori 26695]
Length = 234
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 107/208 (51%), Positives = 147/208 (70%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ RLG+N W SRWF + + ED KIR++L+ L AGV++I+IER
Sbjct: 1 MGQKVNPVGLRLGINRNWTSRWFPSARTAPSNIDEDNKIRKFLKKELYYAGVSEIVIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ V +ARPGLIIGKKG DIEK++ L + E+ +++ EV P+ +A L A+++
Sbjct: 61 AKKLRVTVVAARPGLIIGKKGVDIEKVKDGLKTLIKKEVSINIKEVKHPQADAQLAAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV FRRAMK+ +Q+A++ GA G+KV SGRL GAE++RTE Y+EGRVPL TLRA
Sbjct: 121 ATQLEKRVAFRRAMKKVMQAALKSGAKGIKVCVSGRLAGAEIARTEWYMEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
IDYG A A T YG G+KV++ + +
Sbjct: 181 KIDYGFAEAMTVYGIIGVKVWIFKGEVL 208
>gi|259500898|ref|ZP_05743800.1| 30S ribosomal protein S3 [Lactobacillus iners DSM 13335]
gi|302190649|ref|ZP_07266903.1| 30S ribosomal protein S3 [Lactobacillus iners AB-1]
gi|309803626|ref|ZP_07697716.1| ribosomal protein S3 [Lactobacillus iners LactinV 11V1-d]
gi|309806724|ref|ZP_07700719.1| ribosomal protein S3 [Lactobacillus iners LactinV 03V1-b]
gi|309809126|ref|ZP_07702999.1| ribosomal protein S3 [Lactobacillus iners SPIN 2503V10-D]
gi|312871201|ref|ZP_07731299.1| ribosomal protein S3 [Lactobacillus iners LEAF 3008A-a]
gi|312872777|ref|ZP_07732842.1| ribosomal protein S3 [Lactobacillus iners LEAF 2062A-h1]
gi|312874924|ref|ZP_07734943.1| ribosomal protein S3 [Lactobacillus iners LEAF 2053A-b]
gi|259167592|gb|EEW52087.1| 30S ribosomal protein S3 [Lactobacillus iners DSM 13335]
gi|308164224|gb|EFO66481.1| ribosomal protein S3 [Lactobacillus iners LactinV 11V1-d]
gi|308166904|gb|EFO69088.1| ribosomal protein S3 [Lactobacillus iners LactinV 03V1-b]
gi|308170571|gb|EFO72591.1| ribosomal protein S3 [Lactobacillus iners SPIN 2503V10-D]
gi|311089669|gb|EFQ48094.1| ribosomal protein S3 [Lactobacillus iners LEAF 2053A-b]
gi|311091819|gb|EFQ50198.1| ribosomal protein S3 [Lactobacillus iners LEAF 2062A-h1]
gi|311093215|gb|EFQ51561.1| ribosomal protein S3 [Lactobacillus iners LEAF 3008A-a]
Length = 224
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 94/222 (42%), Positives = 148/222 (66%), Gaps = 2/222 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG+N W ++W+A G +Y L+EDL+IR+Y++ L A ++ + IER
Sbjct: 1 MGQKINPNGFRLGINRDWEAKWYA-GKDYANNLNEDLRIRKYIEQKLADASISNVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G ++E++R +L+ +T +H+++ E+ KP++ A L+ +S+
Sbjct: 60 ANRINLSIHTAKPGMVIGKGGKEVEELRTRLNTITGKNVHINIVEIKKPDLEAKLVGESV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRA ++A Q +M GA G+KV +GRLNGA+++R E + EG VPL TLRA
Sbjct: 120 AKQLEARIAFRRATRKATQRSMHVGAKGIKVQTAGRLNGADMARREWHTEGSVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
IDY A T YG G+KV+++ E+ P A +
Sbjct: 180 DIDYAWVEAATTYGQIGVKVWINRG-EILPQRKNKPVASKKA 220
>gi|223936422|ref|ZP_03628334.1| ribosomal protein S3 [bacterium Ellin514]
gi|223894940|gb|EEF61389.1| ribosomal protein S3 [bacterium Ellin514]
Length = 228
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 109/211 (51%), Positives = 151/211 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI R+ VN W S+W+A E+G LL ED +IR+ L+ L+ A V +ILIER
Sbjct: 1 MGQKSNPIGLRIAVNREWRSKWYAGKKEFGKLLTEDRQIRDLLKKKLESASVPRILIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
CRI + +ARPG++IG+KG +I+K++++LS MT EI++ + E+ PE++A L+A++I
Sbjct: 61 ATRCRITILTARPGVVIGRKGAEIDKLKEELSKMTGKEIYVDIMEIKTPELDAQLVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV FRRAMK+A+Q+ FGA+G+K+ +GRL GAEL+R E Y GRVPL TLRA
Sbjct: 121 ALQLERRVSFRRAMKKALQTTKDFGAEGIKLRCAGRLGGAELARVEQYHWGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYG A A+T YG G+K ++ + SD
Sbjct: 181 DIDYGFAEAKTMYGKLGVKCWICKGETKSDR 211
>gi|116628969|ref|YP_814141.1| 30S ribosomal protein S3 [Lactobacillus gasseri ATCC 33323]
gi|282852655|ref|ZP_06261997.1| ribosomal protein S3 [Lactobacillus gasseri 224-1]
gi|311111232|ref|ZP_07712629.1| ribosomal protein S3 [Lactobacillus gasseri MV-22]
gi|122274033|sp|Q046B9|RS3_LACGA RecName: Full=30S ribosomal protein S3
gi|116094551|gb|ABJ59703.1| SSU ribosomal protein S3P [Lactobacillus gasseri ATCC 33323]
gi|282556397|gb|EFB62017.1| ribosomal protein S3 [Lactobacillus gasseri 224-1]
gi|311066386|gb|EFQ46726.1| ribosomal protein S3 [Lactobacillus gasseri MV-22]
Length = 222
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 97/221 (43%), Positives = 147/221 (66%), Gaps = 2/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLGVN W ++W+A Y L+EDL+IR+++ L A V+ + IER
Sbjct: 1 MGQKINPNGFRLGVNRDWEAKWYAD-KNYADTLNEDLRIRKFISEKLADASVSTVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK G ++E +RK+LS +T +H+++ E+ KP+++A L+ + I
Sbjct: 60 ANRINISIHTAKPGMVIGKGGKEVEALRKQLSALTKKNVHINIVEIKKPDLDAKLVGEGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRA ++A Q +MR GA G+KV +GRLNGA+++R E + EG VPL TLRA
Sbjct: 120 ARQLEARIAFRRATRQATQRSMRSGAKGIKVQTAGRLNGADMARREWHTEGSVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
IDY A T YG G+KV+++ E+ P+ + +
Sbjct: 180 DIDYAWVEAATTYGQIGVKVWINRG-EILPQRKNKPSKKTK 219
>gi|260102361|ref|ZP_05752598.1| 30S ribosomal protein S3 [Lactobacillus helveticus DSM 20075]
gi|260083805|gb|EEW67925.1| 30S ribosomal protein S3 [Lactobacillus helveticus DSM 20075]
gi|328463370|gb|EGF35043.1| 30S ribosomal protein S3 [Lactobacillus helveticus MTCC 5463]
Length = 224
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 101/225 (44%), Positives = 153/225 (68%), Gaps = 1/225 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLGV W S+W+A Y L+EDL+IR+++ LK A V+ + IER
Sbjct: 1 MGQKINPNGFRLGVIHDWESKWYAD-KGYKETLNEDLRIRKFISKKLKDASVSTVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK G+++E +RK+L+ +T ++H+++ E+ KP+++A L+A SI
Sbjct: 60 ANRINISIHTAKPGMVIGKGGSEVEALRKQLNALTGKQVHINIVEIKKPDLDAELVADSI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRAM++A Q AMR GA G+KV SGRLNGA+++R E + EGRVPLQTLRA
Sbjct: 120 ARQLEARIAFRRAMRQATQRAMRAGAKGIKVQTSGRLNGADMARREWHTEGRVPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY A T YG G++V+++ + + + + + +
Sbjct: 180 DIDYAWVNAFTTYGEIGVRVWINRGEILPTRKNKPASKPAKGGNR 224
>gi|317485816|ref|ZP_07944680.1| ribosomal protein S3 [Bilophila wadsworthia 3_1_6]
gi|316922922|gb|EFV44144.1| ribosomal protein S3 [Bilophila wadsworthia 3_1_6]
Length = 213
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 109/208 (52%), Positives = 149/208 (71%), Gaps = 1/208 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG N W SRWF+ +Y A ++ED ++R+Y++ L AG++KI IER
Sbjct: 1 MGQKVHPYGFRLGYNKNWQSRWFS-KKDYPAFVYEDHEVRKYVKKLLYSAGISKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+I+ +ARPG++IG+KG +IEK+R L E L VNE+ +PE+++ L+A++I
Sbjct: 60 GGKIRLILSTARPGIVIGRKGVEIEKLRNDLRAKFGREFSLEVNEIRRPEVDSQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKR V A +FGA+G+KV SGRL GAE++RTE Y +GRVPLQTLRA
Sbjct: 120 AQQLERRVAFRRAMKRTVTMARKFGAEGIKVTCSGRLAGAEIARTEWYRDGRVPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
IDYG A A T YG G+K ++ + +
Sbjct: 180 DIDYGFAEARTTYGIIGVKAWIYKGEIL 207
>gi|27468736|ref|NP_765373.1| 30S ribosomal protein S3 [Staphylococcus epidermidis ATCC 12228]
gi|57867711|ref|YP_189388.1| 30S ribosomal protein S3 [Staphylococcus epidermidis RP62A]
gi|242243953|ref|ZP_04798396.1| 30S ribosomal protein S3 [Staphylococcus epidermidis W23144]
gi|251812053|ref|ZP_04826526.1| 30S ribosomal protein S3 [Staphylococcus epidermidis BCM-HMP0060]
gi|282875348|ref|ZP_06284221.1| ribosomal protein S3 [Staphylococcus epidermidis SK135]
gi|293368439|ref|ZP_06615063.1| 30S ribosomal protein S3 [Staphylococcus epidermidis
M23864:W2(grey)]
gi|29427432|sp|Q8CRG6|RS3_STAES RecName: Full=30S ribosomal protein S3
gi|62287186|sp|Q5HM05|RS3_STAEQ RecName: Full=30S ribosomal protein S3
gi|27316284|gb|AAO05459.1|AE016750_64 30S ribosomal protein S3 [Staphylococcus epidermidis ATCC 12228]
gi|57638369|gb|AAW55157.1| ribosomal protein S3 [Staphylococcus epidermidis RP62A]
gi|242232586|gb|EES34898.1| 30S ribosomal protein S3 [Staphylococcus epidermidis W23144]
gi|251804387|gb|EES57044.1| 30S ribosomal protein S3 [Staphylococcus epidermidis BCM-HMP0060]
gi|281296113|gb|EFA88634.1| ribosomal protein S3 [Staphylococcus epidermidis SK135]
gi|291317397|gb|EFE57819.1| 30S ribosomal protein S3 [Staphylococcus epidermidis
M23864:W2(grey)]
gi|319400618|gb|EFV88843.1| ribosomal protein S3 [Staphylococcus epidermidis FRI909]
gi|329731251|gb|EGG67621.1| ribosomal protein S3 [Staphylococcus epidermidis VCU144]
gi|329736485|gb|EGG72753.1| ribosomal protein S3 [Staphylococcus epidermidis VCU028]
gi|329737085|gb|EGG73340.1| ribosomal protein S3 [Staphylococcus epidermidis VCU045]
Length = 217
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 98/214 (45%), Positives = 150/214 (70%), Gaps = 1/214 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI R+GV W ++W+A ++ +LLHEDLKIR+++ LK+A V+ + IER
Sbjct: 1 MGQKINPIGLRVGVIRDWEAKWYAE-KDFASLLHEDLKIRKFIDNELKEASVSHVDIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++ +PG++IGK G++IEK+R KL+ +T+ ++H++V E+ K +I+A L+A++I
Sbjct: 60 ANRINIAIHTGKPGMVIGKGGSEIEKLRNKLNTLTDKKVHINVIEIKKIDIDARLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R FRR K+A+ AM+ GA G+K SGRL GA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLENRASFRRVQKQAITRAMKNGAKGIKTQVSGRLGGADIARAEQYSEGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
IDY A A+T YG G+KV++ + + +++
Sbjct: 180 DIDYAHAEADTTYGKLGVKVWIYRGEVLPTKNTS 213
>gi|148273795|ref|YP_001223356.1| 30S ribosomal protein S3 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|170780739|ref|YP_001709071.1| 30S ribosomal protein S3 [Clavibacter michiganensis subsp.
sepedonicus]
gi|189044966|sp|A5CUA7|RS3_CLAM3 RecName: Full=30S ribosomal protein S3
gi|189044967|sp|B0RB45|RS3_CLAMS RecName: Full=30S ribosomal protein S3
gi|147831725|emb|CAN02694.1| 30S ribosomal protein S3 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|169155307|emb|CAQ00410.1| 30S ribosomal protein S3 [Clavibacter michiganensis subsp.
sepedonicus]
Length = 265
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 108/230 (46%), Positives = 149/230 (64%), Gaps = 5/230 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQK+NP FRLG+ SRWF+ G Y + ED++IR L+ L +AGVA+I
Sbjct: 1 MGQKVNPYGFRLGITTDHVSRWFSDSTKKGQRYSDYVAEDVRIRTMLKTSLDRAGVARIE 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +Y+ARPG++IG++G + E+IR L +T +I L++ EV PE A L+
Sbjct: 61 IERTRDRVRVDIYTARPGIVIGRRGVEAERIRADLEKLTGKQIQLNILEVKNPEAEAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ IA+QL RV FRRAM++ +Q A R GA GV++ SGRL GAE+SR+E Y EGRVPL
Sbjct: 121 AQGIAEQLAGRVAFRRAMRKGLQGAQRAGAKGVRIQVSGRLGGAEMSRSEFYREGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
TLRA+IDYG A T++G G+KV+V D +++ D A + +
Sbjct: 181 TLRANIDYGFYEARTSFGRIGVKVWVYKGD-ITNKDLAREQANQKSSRPE 229
>gi|109946765|ref|YP_663993.1| 30S ribosomal protein S3 [Helicobacter acinonychis str. Sheeba]
gi|123362793|sp|Q17ZD2|RS3_HELAH RecName: Full=30S ribosomal protein S3
gi|109713986|emb|CAJ98994.1| 30S ribosomal protein S3 [Helicobacter acinonychis str. Sheeba]
Length = 234
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 108/208 (51%), Positives = 149/208 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ RLG+N W SRWF + + ED KIR++L+ L AGV++I+IER
Sbjct: 1 MGQKVNPVGLRLGINRNWTSRWFPSARTAPSNIDEDNKIRKFLKKELYYAGVSQIVIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ V +ARPGLIIGKKG DIEK+++ L + E+ +++ EV +P+ +A L A+++
Sbjct: 61 AKKLRVTVVAARPGLIIGKKGVDIEKVKEGLKTLIKKEVSINIKEVKRPQADAQLAAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV FRRAMK+ +Q+A++ GA GVKV SGRL GAE++RTE Y+EGRVPL TLRA
Sbjct: 121 ATQLEKRVAFRRAMKKVMQAALKSGAKGVKVRVSGRLAGAEIARTEWYMEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
IDYG A A T YG G+KV++ + +
Sbjct: 181 KIDYGFAEAMTVYGIIGVKVWIFKGEVL 208
>gi|317181035|dbj|BAJ58821.1| 30S ribosomal protein S3 [Helicobacter pylori F32]
Length = 234
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 105/208 (50%), Positives = 148/208 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ RLG+N W SRWF + + ED KIR++L+ L AGV++++IER
Sbjct: 1 MGQKVNPVGLRLGINRNWTSRWFPSARTAPSNIDEDNKIRKFLKKELYYAGVSEVVIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ V +ARPGLIIGKKG DIEK+++ L + E+ +++ EV P+ ++ L A+++
Sbjct: 61 AKKLRVTVVAARPGLIIGKKGVDIEKVKEGLKTLIKKEVSINIKEVKCPQADSQLAAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV FRRAMK+ +Q+A++ GA G+KV SGRL GAE++RTE Y+EGRVPL TLRA
Sbjct: 121 ATQLEKRVAFRRAMKKVMQAALKSGAKGIKVRVSGRLAGAEIARTEWYMEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
IDYG A A T YG G+KV++ + +
Sbjct: 181 KIDYGFAEAMTVYGIIGVKVWIFKGEVL 208
>gi|323465830|gb|ADX69517.1| 30S ribosomal protein S3 [Lactobacillus helveticus H10]
Length = 224
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 100/225 (44%), Positives = 152/225 (67%), Gaps = 1/225 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLGV W S+W+A Y L+EDL+IR+++ LK A V+ + IER
Sbjct: 1 MGQKINPNGFRLGVIHDWESKWYAD-KGYKETLNEDLRIRKFISKKLKDASVSTVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK G+++E +RK+L+ +T ++H+++ E+ KP+++A L+A SI
Sbjct: 60 ANRINISIHTAKPGMVIGKGGSEVEALRKQLNALTGKQVHINIVEIKKPDLDAELVADSI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRAM++A Q AMR GA G+K SGRLNGA+++R E + EGRVPLQTLRA
Sbjct: 120 ARQLEARIAFRRAMRQATQRAMRAGAKGIKAQTSGRLNGADMARREWHTEGRVPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY A T YG G++V+++ + + + + + +
Sbjct: 180 DIDYAWVNAFTTYGEIGVQVWINRGEILPTRKNKPASKPAKGGNR 224
>gi|94968260|ref|YP_590308.1| SSU ribosomal protein S3P [Candidatus Koribacter versatilis
Ellin345]
gi|123256699|sp|Q1ISB6|RS3_ACIBL RecName: Full=30S ribosomal protein S3
gi|94550310|gb|ABF40234.1| SSU ribosomal protein S3P [Candidatus Koribacter versatilis
Ellin345]
Length = 223
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 109/218 (50%), Positives = 151/218 (69%), Gaps = 1/218 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG W SRWF +Y LL ED+K++ L+ LK AGV+ I +ER
Sbjct: 1 MGQKVHPYGFRLGYTKPWKSRWFIE-RDYDKLLLEDVKLKAELKEKLKSAGVSSIEVERP 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
RII+ +ARPG+IIG+KG +I+K++ +L TN E+++ + EV KPE++A L+A+SI
Sbjct: 60 GNKLRIIIRTARPGIIIGRKGAEIDKLKGELQKRTNREVYIDIQEVHKPELDAQLVAESI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV FRRAM+++V SA+RFG G+KV SGRLNG E++R+E YL+GR+PL TLRA
Sbjct: 120 ALQLEKRVGFRRAMRKSVDSALRFGCKGIKVRVSGRLNGNEIARSEWYLQGRLPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
IDYG A A T YG G+K +V + + + P
Sbjct: 180 DIDYGFAEARTTYGVIGVKAWVYKGEILPAAKKREPQV 217
>gi|161506879|ref|YP_001576833.1| 30S ribosomal protein S3 [Lactobacillus helveticus DPC 4571]
gi|172048373|sp|A8YXL1|RS3_LACH4 RecName: Full=30S ribosomal protein S3
gi|160347868|gb|ABX26542.1| 30S ribosomal protein S3 [Lactobacillus helveticus DPC 4571]
Length = 224
Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats.
Identities = 101/225 (44%), Positives = 154/225 (68%), Gaps = 1/225 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLGV W S+W+A Y L+EDL+IR+++ LK A V+ + IER
Sbjct: 1 MGQKINPNGFRLGVIHDWESKWYAD-KGYKETLNEDLRIRKFISKKLKDASVSTVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK G+++E +RK+L+ +T+ ++H+++ E+ KP+++A L+A SI
Sbjct: 60 ANRINISIHTAKPGMVIGKGGSEVEALRKQLNALTDKQVHINIVEIKKPDLDAELVADSI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRAM++A Q AMR GA G+KV SGRLNGA+++R E + EGRVPLQTLRA
Sbjct: 120 ARQLEARIAFRRAMRQATQRAMRAGAKGIKVQTSGRLNGADMARREWHTEGRVPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY A T YG G++V+++ + + + + + +
Sbjct: 180 DIDYAWVNAFTTYGEIGVQVWINRGEILPTRKNKPASKPTKGGNR 224
>gi|94985961|ref|YP_605325.1| 30S ribosomal protein S3 [Deinococcus geothermalis DSM 11300]
gi|122986551|sp|Q1IX78|RS3_DEIGD RecName: Full=30S ribosomal protein S3
gi|94556242|gb|ABF46156.1| ribosomal protein S3 [Deinococcus geothermalis DSM 11300]
Length = 248
Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats.
Identities = 112/226 (49%), Positives = 148/226 (65%), Gaps = 1/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KINP FRLG+ WNSRW+A +Y LL ED KIR+ + L AG+A+I IER
Sbjct: 1 MGNKINPNGFRLGITKGWNSRWYAGKKQYSQLLKEDEKIRKLVSQKLAAAGIARIEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119
+ +I+ +A+PG++IGK G I+++R ++ + + + ++V E+P P I+A L+A
Sbjct: 61 GQQVNVIISAAKPGIVIGKGGESIKQLRGEIERLVSAGTVAVNVAEIPNPNISAPLVALR 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA+Q+ERR FRRAMK+A Q M GA GVKVI SGRL GAE +RTE LEGRVPL TLR
Sbjct: 121 IAEQIERRFAFRRAMKQAAQRVMESGARGVKVILSGRLGGAEQARTEKVLEGRVPLHTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
A IDYGTA AET YGS GIKV V + + T+ + E+
Sbjct: 181 ADIDYGTARAETTYGSLGIKVLVFNGEVIGGKTETLARPPRKSDER 226
>gi|325479134|gb|EGC82231.1| ribosomal protein S3 [Anaerococcus prevotii ACS-065-V-Col13]
Length = 238
Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats.
Identities = 96/222 (43%), Positives = 145/222 (65%), Gaps = 1/222 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FR+GV W+S+WFA ++ LL ED IR+ ++ + AG+A I IER
Sbjct: 1 MGQKVNPKGFRVGVIKDWDSKWFADKKDFSDLLVEDYNIRKIVKKEVYDAGIADIEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-TNSEIHLSVNEVPKPEINATLIAQS 119
N ++ V++ +PG++IGK G +E+++KKL I ++V E+ +++A L+A++
Sbjct: 61 VNNLKVTVFAGKPGMVIGKGGAGVEELKKKLEKAAPGKRIIINVEEIKYQDLSAQLVAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA QLE RV FRRAMK+++Q MR GA G+K + SGRL GA+++R+E Y EG +PLQTLR
Sbjct: 121 IASQLENRVAFRRAMKQSMQRTMRAGAKGIKTMVSGRLGGADMARSEGYSEGTIPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
A+IDYG A A+T YG G KV++ + + + +
Sbjct: 181 ANIDYGFAEADTEYGKIGCKVWIYKGEVLPGEKAQREPKMKQ 222
>gi|123969291|ref|YP_001010149.1| 30S ribosomal protein S3 [Prochlorococcus marinus str. AS9601]
gi|126697081|ref|YP_001091967.1| 30S ribosomal protein S3 [Prochlorococcus marinus str. MIT 9301]
gi|152060891|sp|A3PF41|RS3_PROM0 RecName: Full=30S ribosomal protein S3
gi|152060895|sp|A2BTD1|RS3_PROMS RecName: Full=30S ribosomal protein S3
gi|123199401|gb|ABM71042.1| 30S ribosomal protein S3 [Prochlorococcus marinus str. AS9601]
gi|126544124|gb|ABO18366.1| 30S ribosomal protein S3 [Prochlorococcus marinus str. MIT 9301]
Length = 243
Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats.
Identities = 98/230 (42%), Positives = 140/230 (60%), Gaps = 5/230 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KI+P RLG+ S+WFA Y LL ED KIR ++Q AG++ +LI R
Sbjct: 1 MGHKIHPSGLRLGITQEHRSKWFATSKTYPILLQEDFKIRTFIQKKYGAAGISDVLIARK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117
+ + +ARPG+I+G++G+ IE++R + ++ ++V EV + + +A L+A
Sbjct: 61 ADQLELELKTARPGVIVGRQGSGIEELRSGIQKTIGDRTRQVRINVVEVERVDADAFLLA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ IAQQLE+RV FRR ++ A+Q A R G G+K+ GRLNGAE++RTE EGRVPL T
Sbjct: 121 EYIAQQLEKRVAFRRTIRMALQRAQRAGVLGLKIQVGGRLNGAEIARTEWTREGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP--AAEHRVVEK 225
LRA IDY T A T YG GIKV+V + + + TIP A+ R +
Sbjct: 181 LRAEIDYATREANTTYGVLGIKVWVFKGEVLPKEEQTIPVGASPKRKASR 230
>gi|309804976|ref|ZP_07699034.1| ribosomal protein S3 [Lactobacillus iners LactinV 09V1-c]
gi|312874103|ref|ZP_07734138.1| ribosomal protein S3 [Lactobacillus iners LEAF 2052A-d]
gi|315654020|ref|ZP_07906936.1| 30S ribosomal protein S3 [Lactobacillus iners ATCC 55195]
gi|325912336|ref|ZP_08174732.1| ribosomal protein S3 [Lactobacillus iners UPII 143-D]
gi|325913232|ref|ZP_08175601.1| ribosomal protein S3 [Lactobacillus iners UPII 60-B]
gi|329920649|ref|ZP_08277336.1| ribosomal protein S3 [Lactobacillus iners SPIN 1401G]
gi|308165736|gb|EFO67961.1| ribosomal protein S3 [Lactobacillus iners LactinV 09V1-c]
gi|311090443|gb|EFQ48852.1| ribosomal protein S3 [Lactobacillus iners LEAF 2052A-d]
gi|315488716|gb|EFU78362.1| 30S ribosomal protein S3 [Lactobacillus iners ATCC 55195]
gi|325475807|gb|EGC78977.1| ribosomal protein S3 [Lactobacillus iners UPII 143-D]
gi|325477496|gb|EGC80639.1| ribosomal protein S3 [Lactobacillus iners UPII 60-B]
gi|328935907|gb|EGG32367.1| ribosomal protein S3 [Lactobacillus iners SPIN 1401G]
Length = 224
Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats.
Identities = 95/222 (42%), Positives = 148/222 (66%), Gaps = 2/222 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG+N W ++W+A G +Y L+EDL+IR+Y++ L A ++ + IER
Sbjct: 1 MGQKINPNGFRLGINRDWEAKWYA-GKDYANNLNEDLRIRKYIEQKLADASISNVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G ++E++R +L+ +T +H+++ E+ KP++ A L+ +SI
Sbjct: 60 ANRINLSIHTAKPGMVIGKGGKEVEELRTRLNTITGKNVHINIVEIKKPDLEAKLVGESI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRA ++A Q +M GA G+KV +GRLNGA+++R E + EG VPL TLRA
Sbjct: 120 AKQLEARIAFRRATRKATQRSMHVGAKGIKVQTAGRLNGADMARREWHTEGSVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
IDY A T YG G+KV+++ E+ P A +
Sbjct: 180 DIDYAWVEAATTYGQIGVKVWINRG-EILPQRKNKPVASKKA 220
>gi|225175668|ref|ZP_03729662.1| ribosomal protein S3 [Dethiobacter alkaliphilus AHT 1]
gi|225168997|gb|EEG77797.1| ribosomal protein S3 [Dethiobacter alkaliphilus AHT 1]
Length = 226
Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats.
Identities = 103/227 (45%), Positives = 155/227 (68%), Gaps = 2/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FR+GV W ++W+A Y LLHED+KIR+ + HL AGV+K+ IER
Sbjct: 1 MGQKVSPVGFRIGVIRDWEAKWYAD-KNYTDLLHEDMKIRKAIVKHLNNAGVSKVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-TNSEIHLSVNEVPKPEINATLIAQS 119
RI +++A+PG++IGK G+ +E++RKKL + ++H+++ E+ +PE++ATL+A+S
Sbjct: 60 ANRIRISIHTAKPGIVIGKGGSGVEELRKKLEKLTDKKQVHINIVEIKRPELDATLVAES 119
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA QL +R+ FRRAMK+++ MR GA G+KV+ SGRL GAE++RTE EG VPLQTLR
Sbjct: 120 IANQLTKRIAFRRAMKQSIFRTMRAGAKGIKVMISGRLGGAEIARTESNHEGTVPLQTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
A IDYG A+T YG G+KV++ + + ++ +K
Sbjct: 180 ADIDYGFVEADTTYGKIGVKVWIYKGEVLPTKQKQEGGNQNADTKKS 226
>gi|15612298|ref|NP_223951.1| 30S ribosomal protein S3 [Helicobacter pylori J99]
gi|7388209|sp|Q9ZJR9|RS3_HELPJ RecName: Full=30S ribosomal protein S3
gi|4155825|gb|AAD06799.1| 30S RIBOSOMAL PROTEIN S3 [Helicobacter pylori J99]
gi|297380494|gb|ADI35381.1| ribosomal protein S3 [Helicobacter pylori v225d]
gi|308064090|gb|ADO05977.1| 30S ribosomal protein S3 [Helicobacter pylori Sat464]
gi|317009996|gb|ADU80576.1| 30S ribosomal protein S3 [Helicobacter pylori India7]
Length = 234
Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats.
Identities = 107/208 (51%), Positives = 149/208 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ RLG+N W SRWF + + ED KIR++L+ L AGV++I+IER
Sbjct: 1 MGQKVNPVGLRLGINRNWTSRWFPSTRTAPSNIDEDNKIRKFLKKELYYAGVSEIVIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ V +ARPGLIIGKKG DIEK+++ L + E+ +++ EV +P+ +A L A+++
Sbjct: 61 AKKLRVTVVAARPGLIIGKKGVDIEKVKEGLKTLIKKEVSINIKEVKRPQADAQLAAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV FRRAMK+ +Q+A++ GA G+KV SGRL GAE++RTE Y+EGRVPL TLRA
Sbjct: 121 ATQLEKRVAFRRAMKKVMQAALKSGAKGIKVRVSGRLAGAEIARTEWYMEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
IDYG A A T YG G+KV++ + +
Sbjct: 181 KIDYGFAEAMTVYGIIGVKVWIFKGEVL 208
>gi|261838632|gb|ACX98398.1| ribosomal protein S3 [Helicobacter pylori 51]
Length = 234
Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats.
Identities = 106/208 (50%), Positives = 149/208 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ RLG+N W SRWF + + ED KIR++L+ L AGV++I+IER
Sbjct: 1 MGQKVNPVGLRLGINRNWTSRWFPSTRTAPSNIDEDNKIRKFLKKELYYAGVSEIVIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ V +ARPGLIIGKKG DIEK+++ L + E+ +++ EV +P+ ++ L A+++
Sbjct: 61 AKKLRVTVVAARPGLIIGKKGVDIEKVKEGLKTLIKKEVSINIKEVKRPQADSQLAAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV FRRAMK+ +Q+A++ GA G+KV SGRL GAE++RTE Y+EGRVPL TLRA
Sbjct: 121 ATQLEKRVAFRRAMKKVMQAALKSGAKGIKVRVSGRLAGAEIARTEWYMEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
IDYG A A T YG G+KV++ + +
Sbjct: 181 KIDYGFAEAMTVYGIIGVKVWIFKGEVL 208
>gi|302877807|ref|YP_003846371.1| 30S ribosomal protein S3 [Gallionella capsiferriformans ES-2]
gi|302580596|gb|ADL54607.1| ribosomal protein S3 [Gallionella capsiferriformans ES-2]
Length = 235
Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats.
Identities = 112/226 (49%), Positives = 160/226 (70%), Gaps = 1/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL V W+S+WFA + + +L +D+++R YL+ L A V+KI+IER
Sbjct: 1 MGQKIHPTGFRLSVRKNWDSKWFANSANFADMLLKDIEVRAYLKKKLASAMVSKIIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119
K+ ++ +Y+ARPG++IGKKG DIE +R +L + L++ EV KPEI+A LIA +
Sbjct: 61 AKSAKVTIYTARPGMVIGKKGEDIEVLRAELRRRMGLQSVDLAIEEVRKPEIDAQLIADN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
I QLE+R++FRRAMKR++Q+AMR GA G+K++++GRLNG E++RTE Y EGRVPL TLR
Sbjct: 121 ITAQLEKRIMFRRAMKRSMQNAMRLGALGIKIMSAGRLNGIEIARTEWYREGRVPLHTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
A IDYGT+ A+T YG G+KV+V D + + A + V+K
Sbjct: 181 ADIDYGTSEAQTTYGIIGVKVWVYKGDIGQEVAAPAAAEPEKRVKK 226
>gi|294101634|ref|YP_003553492.1| ribosomal protein S3 [Aminobacterium colombiense DSM 12261]
gi|293616614|gb|ADE56768.1| ribosomal protein S3 [Aminobacterium colombiense DSM 12261]
Length = 221
Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats.
Identities = 94/222 (42%), Positives = 149/222 (67%), Gaps = 2/222 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ +RLGV W S+W+A G +Y LHEDLK+R+++ AG++++ IER
Sbjct: 1 MGQKVHPVGYRLGVVTEWESKWYANGKDYAKKLHEDLKLRKWIMDRWAHAGISRVDIERV 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R ++++RPG++IG+ G++I+ ++ +L T S+I ++V E+ P++ A L+++S+
Sbjct: 61 GNVIRFSIWTSRPGVVIGRGGSEIQVVKDELQKQTGSKIMINVQEIKNPDLVAQLVSESV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
+ LERRV FRRAMK+A+ AM+ GA G+KV +GRL GAE++RTE Y EG++PL T+RA
Sbjct: 121 SSALERRVSFRRAMKQAIFRAMKAGAKGIKVQCAGRLGGAEIARTEWYNEGQLPLSTIRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
IDYG A+T YG G+KV++ E + P +
Sbjct: 181 DIDYGFYEAKTMYGIIGVKVWIFRDKE--NERPAQPRPSRKR 220
>gi|308272973|emb|CBX29577.1| 30S ribosomal protein S3 [uncultured Desulfobacterium sp.]
Length = 217
Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats.
Identities = 112/215 (52%), Positives = 151/215 (70%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ TW SRW+A G Y + ED IR++L+ L AG+++I IER+
Sbjct: 1 MGQKVNPIGLRLGIIKTWESRWYA-GKNYAEYILEDSNIRKFLKKKLNSAGISRIEIERS 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ +Y++RPG+IIGKKG++I +++++L + E+ + + EV KPEI+A LIA+S+
Sbjct: 60 SKRVRLRIYASRPGIIIGKKGSEILQLKQELEKQISHEVLIDIQEVRKPEIDAQLIAESV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
+QQ+ +RV FRRAMKR V SAMRFGA GVK+I SGRL GAE++R E Y EGRVPL TLRA
Sbjct: 120 SQQIIKRVAFRRAMKRGVASAMRFGAMGVKIICSGRLGGAEMARREWYREGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
IDYG A T YG GIKV+V + +
Sbjct: 180 DIDYGFTEALTTYGIIGIKVFVFKGEILRKDQIEA 214
>gi|34558021|ref|NP_907836.1| 30S ribosomal protein S3 [Wolinella succinogenes DSM 1740]
gi|61215661|sp|Q7M8E0|RS3_WOLSU RecName: Full=30S ribosomal protein S3
gi|34483739|emb|CAE10736.1| 30S RIBOSOMAL PROTEIN S3 [Wolinella succinogenes]
Length = 236
Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats.
Identities = 112/226 (49%), Positives = 152/226 (67%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N W SRWF + ED KIR++L+ L AGV++I+IERT
Sbjct: 1 MGQKVNPIGLRLGINRNWASRWFPNYQTAPLNISEDHKIRKFLKKELYYAGVSEIIIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ V +ARPG+IIGKKG DIEK+++ L + + EI +++ EV +P+ NA L A+++
Sbjct: 61 AKKLRVTVVAARPGIIIGKKGADIEKLKEALKKIVDKEISINIKEVKRPQANAQLAAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERRV FRRAMK+ +Q+AM+ GA G+K+ SGRL GAE++RTE Y+EGRVPL TLRA
Sbjct: 121 TMQLERRVAFRRAMKKVMQAAMKAGAKGIKIKVSGRLAGAEMARTEWYMEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDYG A A T YG G KV++ + + E +K+
Sbjct: 181 KIDYGFAEAMTTYGIIGAKVWIFKGEVLQKGIQPEKKEEAPARDKE 226
>gi|157164217|ref|YP_001467714.1| 30S ribosomal protein S3 [Campylobacter concisus 13826]
gi|171855078|sp|A7ZG06|RS3_CAMC1 RecName: Full=30S ribosomal protein S3
gi|157101407|gb|EAT98159.2| ribosomal protein S3 [Campylobacter concisus 13826]
Length = 232
Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats.
Identities = 106/224 (47%), Positives = 148/224 (66%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N W SRWF + ED KIR +L+ L AG+++ILIERT
Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPTKQSLPENIGEDYKIRAFLKKKLYYAGISQILIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ V +ARPG+IIGKKG D+E ++ ++S + E+++++ E K + +A L A+++
Sbjct: 61 AKKLRVTVVAARPGIIIGKKGQDVENLKNEVSKLIGKEVNVNIKEERKAQASAQLAAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV FRRAMK+ +Q A + GA G+K+ +GRL GAE++RTE YLEGRVPL TLRA
Sbjct: 121 AMQLEKRVAFRRAMKKVIQGAQKSGAKGIKISVAGRLGGAEMARTEWYLEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
IDYG A A T YG+ GIKV++ + + E +
Sbjct: 181 KIDYGVAEAHTTYGNIGIKVWIFKGEVLQKGVQPEKTEEEAPKK 224
>gi|113955322|ref|YP_729661.1| 30S ribosomal protein S3 [Synechococcus sp. CC9311]
gi|123132723|sp|Q0ID11|RS3_SYNS3 RecName: Full=30S ribosomal protein S3
gi|113882673|gb|ABI47631.1| ribosomal protein S3 [Synechococcus sp. CC9311]
Length = 243
Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats.
Identities = 98/229 (42%), Positives = 139/229 (60%), Gaps = 6/229 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KI+P RLG+ SRW+A Y ALL ED +IR+++ AG++ +LI R
Sbjct: 1 MGHKIHPTGLRLGITQEHRSRWYASSKSYPALLQEDDRIRKFIHKKYGSAGISDVLIARK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117
+ + +ARPG+++G++G+ IE +R + ++ ++V EV + + +A L+A
Sbjct: 61 ADQLEVELKTARPGVLVGRQGSGIEDLRSGIQKTVGDSSRQVRINVVEVERVDADAFLLA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ IAQQLE+RV FRR ++ AVQ A R G G+K+ SGRLNGAE++RTE EGRVPL T
Sbjct: 121 EYIAQQLEKRVAFRRTIRMAVQRAQRAGVLGLKIQVSGRLNGAEIARTEWTREGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS---DSTIPAAEHRVV 223
LRA IDY T VA T YG GIKV+V + +SD + A R
Sbjct: 181 LRAEIDYATKVASTTYGVLGIKVWVFKGEVLSDDSQQQIPVGANPRRRA 229
>gi|15605622|ref|NP_212995.1| ribosomal protein S03 [Aquifex aeolicus VF5]
gi|6647794|sp|O66437|RS3_AQUAE RecName: Full=30S ribosomal protein S3
gi|2982772|gb|AAC06398.1| ribosomal protein S03 [Aquifex aeolicus VF5]
Length = 212
Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats.
Identities = 108/212 (50%), Positives = 146/212 (68%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +PI FRLGV W S+W+A EY LLHEDLKI+ Y++ K AGV+K+ IER
Sbjct: 1 MGQKTHPIGFRLGVIKEWPSKWYAPKKEYSKLLHEDLKIKNYIKERYKVAGVSKVEIERI 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-TNSEIHLSVNEVPKPEINATLIAQS 119
R+ +++ARP ++IG++G ++E ++K L M EI +SV EV PE++A L+AQ
Sbjct: 61 VDKVRVKIHTARPAIVIGRRGQEVENLKKTLEKMLPGKEITISVVEVRVPELDAQLVAQD 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA Q+ERRV RRAMKRA+ +A++ GA GVKV GR+ GAEL+R E +L GR+PLQTLR
Sbjct: 121 IATQIERRVSHRRAMKRAIDNALKAGAKGVKVQVKGRIGGAELARKEWFLVGRMPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
A IDYG A A T YG +KV++ D ++
Sbjct: 181 ADIDYGFATAYTKYGILSVKVWIYKGDVLNGR 212
>gi|315587202|gb|ADU41583.1| 30S ribosomal protein S3 [Helicobacter pylori 35A]
Length = 234
Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats.
Identities = 107/208 (51%), Positives = 149/208 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ RLG+N W SRWF + + ED KIR++L+ L AGV++I+IER
Sbjct: 1 MGQKVNPVGLRLGINRNWTSRWFPSTRTAPSNIDEDNKIRKFLKKELYYAGVSEIVIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ V +ARPGLIIGKKG DIEK+++ L + E+ +++ EV P+ ++ L A+++
Sbjct: 61 AKKLRVTVVAARPGLIIGKKGVDIEKVKEGLKTLIKKEVSINIKEVKHPQADSQLAAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV FRRAMK+ +Q+A++FGA G+KV SGRL GAE++RTE Y+EGRVPL TLRA
Sbjct: 121 ATQLEKRVAFRRAMKKVMQAALKFGAKGIKVRVSGRLAGAEIARTEWYMEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
IDYG A A T YG G+KV++ + +
Sbjct: 181 KIDYGFAEAMTVYGIIGVKVWIFKGEVL 208
>gi|148243221|ref|YP_001228378.1| 30S ribosomal protein S3 [Synechococcus sp. RCC307]
gi|189045341|sp|A5GVW6|RS3_SYNR3 RecName: Full=30S ribosomal protein S3
gi|147851531|emb|CAK29025.1| 30S ribosomal protein S3 [Synechococcus sp. RCC307]
Length = 242
Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats.
Identities = 94/220 (42%), Positives = 134/220 (60%), Gaps = 3/220 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KINP RLG+ SRW+A Y LL ED +IR+++ AG++ +LI R
Sbjct: 1 MGHKINPTGLRLGITQEHRSRWYAPARTYPTLLQEDERIRKFVNKKYASAGISSVLIARK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117
+ + +ARPG+++G++G+ IE++R + ++ ++V EV + + +A L+A
Sbjct: 61 ADQLEVELKTARPGVLVGRQGSGIEELRAGIQKTLGDKSRQVRINVVEVERVDADAFLLA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ IAQQLE+RV FRR ++ AVQ A R G G+K+ GRLNGAE++RTE EGRVPL T
Sbjct: 121 EYIAQQLEKRVAFRRVIRMAVQRAQRAGVLGLKIQVGGRLNGAEIARTEWTREGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
LRA IDY T VA T YG GIKV+V + + P
Sbjct: 181 LRADIDYATKVASTTYGVLGIKVWVFKGEVLPGQKQQPPV 220
>gi|313680509|ref|YP_004058248.1| SSU ribosomal protein s3p [Oceanithermus profundus DSM 14977]
gi|313153224|gb|ADR37075.1| SSU ribosomal protein S3P [Oceanithermus profundus DSM 14977]
Length = 247
Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats.
Identities = 102/226 (45%), Positives = 142/226 (62%), Gaps = 1/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KINPI FRLG+ W SRW++ Y LL ED K+RE ++ + G+A+I IER
Sbjct: 1 MGNKINPIGFRLGITRDWESRWYSGKKGYAQLLEEDRKVRELIENEVAHGGIARIDIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT-NSEIHLSVNEVPKPEINATLIAQS 119
N + V++A+PG+IIG+ G I+++R +L M N I L+V EV P ++A L+AQ
Sbjct: 61 ADNLSVTVHAAKPGVIIGRGGETIKRMRAELQKMFPNRTIALNVQEVGNPNLSAPLVAQR 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
+A+Q+ERR RRA+K+AVQ + GA G KV+ SGR+ GAE +RTE +GRVPL TLR
Sbjct: 121 VAEQIERRFAVRRAIKQAVQRVVESGAQGAKVVVSGRIGGAEQARTEWSSDGRVPLHTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
A+IDYG A+A T YG G+K Y+ + + AA +
Sbjct: 181 ANIDYGFALARTTYGVLGVKAYIFKGEVIGQQKPARKAAAAAGKPE 226
>gi|217032066|ref|ZP_03437566.1| hypothetical protein HPB128_16g26 [Helicobacter pylori B128]
gi|298735662|ref|YP_003728187.1| 30S ribosomal protein S3 [Helicobacter pylori B8]
gi|216946214|gb|EEC24822.1| hypothetical protein HPB128_16g26 [Helicobacter pylori B128]
gi|298354851|emb|CBI65723.1| small subunit ribosomal protein S3 [Helicobacter pylori B8]
Length = 234
Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats.
Identities = 107/208 (51%), Positives = 149/208 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ RLG+N W SRWF + + ED KIR++L+ L AGV++I+IER
Sbjct: 1 MGQKVNPVGLRLGINRNWTSRWFPSARTAPSNIDEDNKIRKFLKKELYYAGVSEIVIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ V +ARPGLIIGKKG DIEK+++ L + E+ +++ EV +P+ +A L A+++
Sbjct: 61 AKKLRVTVVAARPGLIIGKKGVDIEKVKEGLKALIKKEVSINIKEVKRPQADAQLAAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV FRRAMK+ +Q+A++ GA G+KV SGRL GAE++RTE Y+EGRVPL TLRA
Sbjct: 121 ATQLEKRVAFRRAMKKVMQAALKSGAKGIKVRVSGRLAGAEIARTEWYMEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
IDYG A A T YG G+KV++ + +
Sbjct: 181 KIDYGFAEAMTVYGIIGVKVWIFKGEVL 208
>gi|116495941|ref|YP_807675.1| ribosomal protein S3 [Lactobacillus casei ATCC 334]
gi|191639422|ref|YP_001988588.1| 30S ribosomal protein S3 [Lactobacillus casei BL23]
gi|239630345|ref|ZP_04673376.1| 30S ribosomal protein S3 [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|301067497|ref|YP_003789520.1| 30S ribosomal protein L3 [Lactobacillus casei str. Zhang]
gi|122262659|sp|Q034Y9|RS3_LACC3 RecName: Full=30S ribosomal protein S3
gi|116106091|gb|ABJ71233.1| SSU ribosomal protein S3P [Lactobacillus casei ATCC 334]
gi|190713724|emb|CAQ67730.1| 30S ribosomal protein S3 [Lactobacillus casei BL23]
gi|239527957|gb|EEQ66958.1| 30S ribosomal protein S3 [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|300439904|gb|ADK19670.1| Ribosomal protein S3 [Lactobacillus casei str. Zhang]
Length = 220
Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats.
Identities = 97/214 (45%), Positives = 152/214 (71%), Gaps = 1/214 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FR+GV W+++W+A ++ A LHED++IR ++ L+ A V++I IER
Sbjct: 1 MGQKINPTGFRVGVIRDWDAKWYAD-KDFAAFLHEDIEIRNFINKKLQDASVSRIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I +++A+PG++IGK G+++E +RK+L+ +T ++H+++ E+ KP+++A L+ ++I
Sbjct: 60 AKRVNISIHTAKPGMVIGKGGSEVENLRKQLNKLTGRQVHINIVEIKKPDLDAKLVGENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE+R+ FRRAM++A+Q MR GA G+K ASGRLNGA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLEQRIAFRRAMRQAMQRTMRAGAKGIKTQASGRLNGADIARREHYNEGLVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
IDY A T YG GIK +++ + + +
Sbjct: 180 DIDYAWEEAATTYGRIGIKTWINRGEILPEKPKQ 213
>gi|317178396|dbj|BAJ56184.1| 30S ribosomal protein S3 [Helicobacter pylori F30]
Length = 234
Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats.
Identities = 108/208 (51%), Positives = 149/208 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ RLG+N W SRWF + + ED KIR++L+ L AGV++I+IER
Sbjct: 1 MGQKVNPVGLRLGINRNWTSRWFPSARTAPSNIDEDNKIRKFLKKELYYAGVSEIVIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ V +ARPGLIIGKKG DIEK+++ L + E+ +++ EV +P+ +A L A+S+
Sbjct: 61 AKKLRVTVVAARPGLIIGKKGVDIEKVKEGLKTLIKKEVSINIKEVKRPQADAQLAAESV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV FRRAMK+ +Q+A++ GA G+KV SGRL GAE++RTE Y+EGRVPL TLRA
Sbjct: 121 ATQLEKRVAFRRAMKKVMQAALKSGAKGIKVRVSGRLAGAEIARTEWYMEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
IDYG A A T YG G+KV++ + +
Sbjct: 181 KIDYGFAEAMTVYGIIGVKVWIFKGEVL 208
>gi|323700812|ref|ZP_08112724.1| ribosomal protein S3 [Desulfovibrio sp. ND132]
gi|323460744|gb|EGB16609.1| ribosomal protein S3 [Desulfovibrio desulfuricans ND132]
Length = 213
Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats.
Identities = 106/208 (50%), Positives = 153/208 (73%), Gaps = 1/208 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG N W SRW++R +Y A + +D ++R++++ L QAGV++I IER
Sbjct: 1 MGQKVHPYGFRLGYNKNWLSRWYSR-KDYPAFVFQDDQVRKFVKKKLFQAGVSRIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+I+++ARPG++IG+KG +IEK+R++L + +E + VNE+ +PE+ A L+A+SI
Sbjct: 60 GGKIRLIIHTARPGIVIGRKGVEIEKLREELRSKFQTEFTIEVNEIRRPEVEAQLVAESI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERR+ FRRAMKR V A +FGA+G+KV +GRL GAE++R E Y +GRVPL TLRA
Sbjct: 120 AQQLERRIAFRRAMKRTVGLARKFGAEGIKVACAGRLAGAEIARGEWYRDGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
IDYG A A T YG G+KV++ + +
Sbjct: 180 DIDYGFAEASTTYGVIGVKVWIFKGEIL 207
>gi|227533966|ref|ZP_03964015.1| ribosomal protein S3 [Lactobacillus paracasei subsp. paracasei ATCC
25302]
gi|227188343|gb|EEI68410.1| ribosomal protein S3 [Lactobacillus paracasei subsp. paracasei ATCC
25302]
Length = 220
Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats.
Identities = 96/214 (44%), Positives = 152/214 (71%), Gaps = 1/214 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FR+GV W+++W+A ++ A LHED++IR ++ L+ A V++I IER
Sbjct: 1 MGQKINPTGFRVGVIRDWDAKWYAD-KDFAAFLHEDIEIRNFINKKLQDASVSRIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I +++A+PG++IGK G+++E +RK+L+ +T ++H+++ E+ KP++++ L+ ++I
Sbjct: 60 AKRVNISIHTAKPGMVIGKGGSEVENLRKQLNKLTGRQVHINIVEIKKPDLDSKLVGENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE+R+ FRRAM++A+Q MR GA G+K ASGRLNGA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLEQRIAFRRAMRQAMQRTMRAGAKGIKTQASGRLNGADIARREHYNEGLVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
IDY A T YG GIK +++ + + +
Sbjct: 180 DIDYAWEEAATTYGRIGIKTWINRGEILPEKPKQ 213
>gi|307637984|gb|ADN80434.1| SSU ribosomal protein S3p:S3e [Helicobacter pylori 908]
Length = 234
Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats.
Identities = 107/208 (51%), Positives = 149/208 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ RLG+N W SRWF + + ED KIR++L+ L AGV++I+IER
Sbjct: 1 MGQKVNPVGLRLGINRNWTSRWFPSARTAPSNIDEDNKIRKFLKKELYYAGVSEIVIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ V +ARPGLIIGKKG DIEK+++ L + E+ +++ EV +P+ +A L A+++
Sbjct: 61 AKKLRVTVVAARPGLIIGKKGVDIEKVKEGLKTLIKKEVSINIKEVKRPQADAQLAAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV FRRAMK+ +Q+A++ GA G+KV SGRL GAE++RTE Y+EGRVPL TLRA
Sbjct: 121 ATQLEKRVAFRRAMKKVMQAALKSGAKGIKVRVSGRLAGAEIARTEWYMEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
IDYG A A T YG G+KV++ + +
Sbjct: 181 KIDYGFAEAMTVYGIIGVKVWIFKGEVL 208
>gi|108563683|ref|YP_627999.1| 30S ribosomal protein S3 [Helicobacter pylori HPAG1]
gi|188528101|ref|YP_001910788.1| 30S ribosomal protein S3 [Helicobacter pylori Shi470]
gi|208435210|ref|YP_002266876.1| ribosomal protein S3 [Helicobacter pylori G27]
gi|217033630|ref|ZP_03439058.1| hypothetical protein HP9810_899g66 [Helicobacter pylori 98-10]
gi|254779855|ref|YP_003057961.1| 30S ribosomal protein S3 [Helicobacter pylori B38]
gi|308183423|ref|YP_003927550.1| 30S ribosomal protein S3 [Helicobacter pylori PeCan4]
gi|308185065|ref|YP_003929198.1| 30S ribosomal protein S3 [Helicobacter pylori SJM180]
gi|123073728|sp|Q1CRU7|RS3_HELPH RecName: Full=30S ribosomal protein S3
gi|226697719|sp|B5Z8W1|RS3_HELPG RecName: Full=30S ribosomal protein S3
gi|226697720|sp|B2UV76|RS3_HELPS RecName: Full=30S ribosomal protein S3
gi|107837456|gb|ABF85325.1| ribosomal protein S3 [Helicobacter pylori HPAG1]
gi|188144341|gb|ACD48758.1| 30S ribosomal protein S3 [Helicobacter pylori Shi470]
gi|208433139|gb|ACI28010.1| ribosomal protein S3 [Helicobacter pylori G27]
gi|216943976|gb|EEC23410.1| hypothetical protein HP9810_899g66 [Helicobacter pylori 98-10]
gi|254001767|emb|CAX29998.1| 30S ribosomal subunit protein S3 [Helicobacter pylori B38]
gi|261840028|gb|ACX99793.1| 30S ribosomal protein S3 [Helicobacter pylori 52]
gi|308060985|gb|ADO02881.1| 30S ribosomal protein S3 [Helicobacter pylori SJM180]
gi|308062598|gb|ADO04486.1| 30S ribosomal protein S3 [Helicobacter pylori Cuz20]
gi|308065608|gb|ADO07500.1| 30S ribosomal protein S3 [Helicobacter pylori PeCan4]
gi|317011513|gb|ADU85260.1| 30S ribosomal protein S3 [Helicobacter pylori SouthAfrica7]
gi|317013100|gb|ADU83708.1| 30S ribosomal protein S3 [Helicobacter pylori Lithuania75]
gi|325996589|gb|ADZ51994.1| 30S ribosomal protein S3 [Helicobacter pylori 2018]
gi|325998179|gb|ADZ50387.1| 30S ribosomal protein S3 [Helicobacter pylori 2017]
Length = 234
Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats.
Identities = 107/208 (51%), Positives = 149/208 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ RLG+N W SRWF + + ED KIR++L+ L AGV++I+IER
Sbjct: 1 MGQKVNPVGLRLGINRNWTSRWFPSARTAPSNIDEDNKIRKFLKKELYYAGVSEIVIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ V +ARPGLIIGKKG DIEK+++ L + E+ +++ EV +P+ +A L A+++
Sbjct: 61 AKKLRVTVVAARPGLIIGKKGVDIEKVKEGLKTLIKKEVSINIKEVKRPQADAQLAAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV FRRAMK+ +Q+A++ GA G+KV SGRL GAE++RTE Y+EGRVPL TLRA
Sbjct: 121 ATQLEKRVAFRRAMKKVMQAALKSGAKGIKVRVSGRLAGAEIARTEWYMEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
IDYG A A T YG G+KV++ + +
Sbjct: 181 KIDYGFAEAMTVYGIIGVKVWIFKGEVL 208
>gi|227501140|ref|ZP_03931189.1| ribosomal protein S3 [Anaerococcus tetradius ATCC 35098]
gi|227216725|gb|EEI82126.1| ribosomal protein S3 [Anaerococcus tetradius ATCC 35098]
Length = 239
Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats.
Identities = 98/222 (44%), Positives = 146/222 (65%), Gaps = 1/222 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FR+GV W+S+WFA ++ LL ED IR+ ++ + AG+A I IER
Sbjct: 1 MGQKVNPKGFRVGVIRDWDSKWFADKKDFSELLVEDYNIRKIVKKEVYDAGIADIEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-TNSEIHLSVNEVPKPEINATLIAQS 119
N +I +++A+PG++IGK G +E+++KKL + I ++V E+ ++ A L+A+S
Sbjct: 61 VNNLKITIFAAKPGMVIGKGGAGVEELKKKLEKAAPSKRIIINVEEIKYQDLAAQLVAES 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA QLE RV FRRAMK+++Q MR GA G+K + SGRL GA+++R+E Y EG +PLQTLR
Sbjct: 121 IASQLENRVAFRRAMKQSIQRTMRAGAKGIKTMVSGRLGGADMARSEGYSEGTIPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
A+IDYG A A+T YG G KV++ + + + +
Sbjct: 181 ANIDYGFAEADTEYGKIGCKVWIYKGEVLPGEKAQREPKMKQ 222
>gi|254526486|ref|ZP_05138538.1| ribosomal protein S3 [Prochlorococcus marinus str. MIT 9202]
gi|221537910|gb|EEE40363.1| ribosomal protein S3 [Prochlorococcus marinus str. MIT 9202]
Length = 243
Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats.
Identities = 95/231 (41%), Positives = 139/231 (60%), Gaps = 6/231 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KI+P RLG+ S+WFA Y LL ED KIR +++ AG++ +LI R
Sbjct: 1 MGHKIHPSGLRLGITQEHRSKWFATSKTYPILLQEDFKIRTFIEKKYGAAGISDVLIARK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117
+ + +ARPG+I+G++G+ IE++R + ++ ++V EV + + +A L+A
Sbjct: 61 ADQLELELKTARPGVIVGRQGSGIEELRSGIQKTIGDRTRQVRINVVEVERVDADAFLLA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ IAQQLE+RV FRR ++ A+Q A R G G+K+ GRLNGAE++RTE EGRVPL T
Sbjct: 121 EYIAQQLEKRVAFRRTIRMALQRAQRAGVLGLKIQVGGRLNGAEIARTEWTREGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA---AEHRVVEK 225
LRA IDY T A T YG GIKV+V + + + TIP + + +
Sbjct: 181 LRAEIDYATREANTTYGVLGIKVWVFKGEVLPKEEQTIPVGANPKRKASRR 231
>gi|317182559|dbj|BAJ60343.1| 30S ribosomal protein S3 [Helicobacter pylori F57]
Length = 234
Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats.
Identities = 106/208 (50%), Positives = 149/208 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ RLG+N W SRWF + + ED KIR++L+ L AGV++I+IER
Sbjct: 1 MGQKVNPVGLRLGINRNWTSRWFPSARTAPSNIDEDNKIRKFLKKELYYAGVSEIVIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ V +ARPGLIIGKKG DIEK+++ L + E+ +++ EV +P+ ++ L A+++
Sbjct: 61 AKKLRVTVVAARPGLIIGKKGVDIEKVKEGLKTLIKKEVSINIKEVKRPQADSQLAAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV FRRAMK+ +Q+A++ GA G+KV SGRL GAE++RTE Y+EGRVPL TLRA
Sbjct: 121 ATQLEKRVAFRRAMKKVMQAALKSGAKGIKVRVSGRLAGAEIARTEWYMEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
IDYG A A T YG G+KV++ + +
Sbjct: 181 KIDYGFAEAMTVYGIIGVKVWIFKGEVL 208
>gi|149195492|ref|ZP_01872570.1| 30S ribosomal protein S3 [Caminibacter mediatlanticus TB-2]
gi|149134374|gb|EDM22872.1| 30S ribosomal protein S3 [Caminibacter mediatlanticus TB-2]
Length = 238
Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats.
Identities = 105/226 (46%), Positives = 154/226 (68%), Gaps = 1/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+N W SRWF + + D ++R++L+ L AG++ I+IERT
Sbjct: 1 MGQKTNPIGLRLGINKNWRSRWFINYNTMPENVLNDYELRKFLKKKLYYAGISDIIIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119
K RI +++A+PG+IIGK G+++E ++K+L + E+ L++ E KP+I+A L A++
Sbjct: 61 AKKVRITIFAAKPGIIIGKGGSEVEALKKELQKLVGDKELILNIKEERKPQISAQLAAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
+A Q+ERRV FRRAMK+ +Q+A++ GA G+KV SGRLNGAE++RTE YLEGRVPL TLR
Sbjct: 121 VATQIERRVAFRRAMKKVIQNALKNGAKGIKVQVSGRLNGAEMARTEWYLEGRVPLHTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
A IDYG A A T YG G+KV++ + + ++E + +
Sbjct: 181 AKIDYGFAEALTTYGIIGVKVWIFKGEVLQKKGQVESSSEAKPQRR 226
>gi|81429371|ref|YP_396372.1| 30S ribosomal protein S3 [Lactobacillus sakei subsp. sakei 23K]
gi|91207818|sp|Q38UR8|RS3_LACSS RecName: Full=30S ribosomal protein S3
gi|78611014|emb|CAI56066.1| 30S ribosomal protein S3 [Lactobacillus sakei subsp. sakei 23K]
Length = 219
Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats.
Identities = 94/211 (44%), Positives = 143/211 (67%), Gaps = 1/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FR+GV W+++W+A ++ LHEDLKIR+Y+ L A V+ I IER
Sbjct: 1 MGQKINPTGFRVGVIRDWDAKWYAE-KDFATFLHEDLKIRKYINTKLADASVSTIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++A+PG++IGK G+++E +RK L+N+T ++H+++ E+ KP+++A L+ + I
Sbjct: 60 ANRVNVSIHTAKPGMVIGKGGSEVENLRKALNNLTGKKVHINIVEIKKPDLDAHLVGEGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRA ++A+Q MR GA G+K +GRLNGA++SR E + +G VPL TLRA
Sbjct: 120 ARQLEARVAFRRAQRQAMQRTMRAGAKGIKTQVAGRLNGADMSRIETHAQGTVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDY A T YG G+K ++ + +
Sbjct: 180 DIDYSWDEAMTTYGKLGVKTWIYRGEVLPAK 210
>gi|16329935|ref|NP_440663.1| 30S ribosomal protein S3 [Synechocystis sp. PCC 6803]
gi|2500398|sp|P73314|RS3_SYNY3 RecName: Full=30S ribosomal protein S3
gi|1652421|dbj|BAA17343.1| 30S ribosomal protein S3 [Synechocystis sp. PCC 6803]
Length = 240
Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats.
Identities = 99/228 (43%), Positives = 144/228 (63%), Gaps = 2/228 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P+ FRLG+ S W+A Y LL ED KIR+Y++ L AG++ I IER
Sbjct: 1 MGQKIHPVGFRLGITKDHKSCWYADPKRYPELLQEDHKIRQYIEKTLNNAGISDIRIERK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN--SEIHLSVNEVPKPEINATLIAQ 118
+ + +++ARPG+++G+ G+ IE++R+ L + +I ++V EVP + +A L+A+
Sbjct: 61 AEQIELGIHTARPGVVVGRGGSGIEQLREGLQKLLGSARQIRVNVIEVPNADADAALMAE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
I QQLERRV FRR +++A+Q A R G+K+ SGRLNGAE++RTE EGRVPL TL
Sbjct: 121 YIGQQLERRVSFRRVVRQALQRAERAEVKGIKIQVSGRLNGAEIARTEWVREGRVPLHTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
RA IDY A T YG GIKV++ + + ++ I A + K
Sbjct: 181 RADIDYAYRTALTTYGILGIKVWIFKGEVIPGQEAAIVAPPSQPRRKS 228
>gi|257458702|ref|ZP_05623826.1| ribosomal protein S3 [Campylobacter gracilis RM3268]
gi|257443891|gb|EEV19010.1| ribosomal protein S3 [Campylobacter gracilis RM3268]
Length = 231
Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats.
Identities = 108/229 (47%), Positives = 150/229 (65%), Gaps = 5/229 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N W SRWF + + ED KIR++L+ L AG+++ILIERT
Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPSKATLSESIGEDYKIRKFLKAKLYYAGISQILIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ + +ARPG+IIGKKG ++E +R ++ + N +I +++ E K NA L A+++
Sbjct: 61 AKKIRVTIVAARPGIIIGKKGGEVENLRSEVVKLVNKDIAINIKEERKVGSNALLAAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV FRRAMK+ +Q A + GA G+K+ +GRL GAE++RTE YLEGRVPL TLRA
Sbjct: 121 AMQLERRVAFRRAMKKVIQGAQKAGAKGIKICVAGRLGGAEMARTEWYLEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV-----SDSDSTIPAAEHRVVE 224
IDYG A A T YG+ GIKV++ + + ++ P R
Sbjct: 181 RIDYGFAEAHTTYGNIGIKVWIFKGEILQKGIQAEKTDDAPKKTRRPRR 229
>gi|312880366|ref|ZP_07740166.1| SSU ribosomal protein S3P [Aminomonas paucivorans DSM 12260]
gi|310783657|gb|EFQ24055.1| SSU ribosomal protein S3P [Aminomonas paucivorans DSM 12260]
Length = 223
Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats.
Identities = 93/220 (42%), Positives = 147/220 (66%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ +RLGV W SRW+A Y LHEDL++R++++ AG+++I IER
Sbjct: 1 MGQKVHPVGYRLGVIYDWESRWYADKKTYAKNLHEDLRLRQWVKKRWGHAGISRIEIERI 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R V++ARPG++IGK G +I+ +R++L T + + +++ E+ + +A ++++ +
Sbjct: 61 GNVMRFTVWTARPGVVIGKGGAEIQAVREELQKKTGNRVMINIQEMKNADADAQVVSEGV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A LERRV FRRAMK+++ AM+ GA G+K+ SGRL GAE++RTE YLEG++PL TLRA
Sbjct: 121 ASSLERRVSFRRAMKQSIFRAMKAGAKGIKIQCSGRLGGAEIARTEWYLEGQLPLSTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
I YG AV+ T YG G+KV++ + + + + A
Sbjct: 181 DISYGYAVSRTIYGVIGVKVWIYKGEIIGGAKAQPEAVSR 220
>gi|313112874|ref|ZP_07798520.1| ribosomal protein S3 [Faecalibacterium cf. prausnitzii KLE1255]
gi|310624779|gb|EFQ08088.1| ribosomal protein S3 [Faecalibacterium cf. prausnitzii KLE1255]
Length = 234
Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats.
Identities = 99/230 (43%), Positives = 136/230 (59%), Gaps = 12/230 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+SRWFA ++ L ED KIR L+ LK AGV KI IERT
Sbjct: 1 MGQKVNPHGIRVGVIKDWDSRWFASKKDFSDNLVEDHKIRTELKAQLKDAGVPKIEIERT 60
Query: 61 HK------NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINAT 114
+ +Y A+PG++IGK G + ++ KL+ + ++V EV NA
Sbjct: 61 VDPSTSAPRVTVNIYCAKPGMVIGKGGEERVALQNKLTKEYGKTVIVNVIEVKSAATNAQ 120
Query: 115 LIAQSIAQQLERRVVFRRAMKRAVQSAMRFGA------DGVKVIASGRLNGAELSRTECY 168
L+A+ IA+QLE RV FRRAMK+ +++AM G+K + SGRL GA+++RTE Y
Sbjct: 121 LVAEDIARQLENRVTFRRAMKQCMRNAMSPRDRATVPAKGIKAMCSGRLGGADIARTESY 180
Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
EG +PLQTLRA IDYG A A T YG G+KV+V + + + +
Sbjct: 181 HEGTIPLQTLRADIDYGFAEAATTYGRIGVKVWVYKGEVLKSAKTAQKKE 230
>gi|257440263|ref|ZP_05616018.1| ribosomal protein S3 [Faecalibacterium prausnitzii A2-165]
gi|257197297|gb|EEU95581.1| ribosomal protein S3 [Faecalibacterium prausnitzii A2-165]
Length = 234
Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats.
Identities = 99/230 (43%), Positives = 136/230 (59%), Gaps = 12/230 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+SRWFA ++ L ED KIR L+ LK AGV KI IERT
Sbjct: 1 MGQKVNPHGIRVGVIKDWDSRWFASKKDFSDNLVEDHKIRTELKAQLKDAGVPKIEIERT 60
Query: 61 HK------NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINAT 114
+ +Y A+PG++IGK G + ++ KL+ + ++V EV NA
Sbjct: 61 VDPSTSAPRVTVNIYCAKPGMVIGKGGEERVALQNKLTKEYGKTVIVNVIEVKSASTNAQ 120
Query: 115 LIAQSIAQQLERRVVFRRAMKRAVQSAMRFGA------DGVKVIASGRLNGAELSRTECY 168
L+A+ IA+QLE RV FRRAMK+ +++AM G+K + SGRL GA+++RTE Y
Sbjct: 121 LVAEDIARQLENRVTFRRAMKQCMRNAMSPRDRSTVPAKGIKAMCSGRLGGADIARTESY 180
Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
EG +PLQTLRA IDYG A A T YG G+KV+V + + + +
Sbjct: 181 HEGTIPLQTLRADIDYGFAEAATTYGRIGVKVWVYKGEVLKSAKTAQKKE 230
>gi|157414157|ref|YP_001485023.1| 30S ribosomal protein S3 [Prochlorococcus marinus str. MIT 9215]
gi|189045028|sp|A8G756|RS3_PROM2 RecName: Full=30S ribosomal protein S3
gi|157388732|gb|ABV51437.1| 30S ribosomal protein S3 [Prochlorococcus marinus str. MIT 9215]
Length = 243
Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats.
Identities = 95/231 (41%), Positives = 139/231 (60%), Gaps = 6/231 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KI+P RLG+ S+WFA Y LL ED KIR +++ AG++ +LI R
Sbjct: 1 MGHKIHPSGLRLGITQEHRSKWFATSKTYPILLQEDFKIRTFIEKKYGAAGISDVLIARK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117
+ + +ARPG+I+G++G+ IE++R + ++ ++V EV + + +A L+A
Sbjct: 61 ADQLELELKTARPGVIVGRQGSGIEELRSGIQKTIGDRTRQVRINVVEVERVDADAFLLA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ IAQQLE+RV FRR ++ A+Q A R G G+K+ GRLNGAE++RTE EGRVPL T
Sbjct: 121 EYIAQQLEKRVAFRRTIRMALQRAQRAGVLGLKIQVGGRLNGAEIARTEWTREGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA---AEHRVVEK 225
LRA IDY T A T YG GIKV+V + + + TIP + + +
Sbjct: 181 LRAEIDYATREANTTYGVLGIKVWVFKGEVLPKEEQTIPVGANPKRKASRR 231
>gi|269955441|ref|YP_003325230.1| 30S ribosomal protein S3 [Xylanimonas cellulosilytica DSM 15894]
gi|269304122|gb|ACZ29672.1| ribosomal protein S3 [Xylanimonas cellulosilytica DSM 15894]
Length = 279
Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats.
Identities = 101/230 (43%), Positives = 148/230 (64%), Gaps = 4/230 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQK++P +RLG+ SRWFA G Y + ED++IR+ + L++AG+AK+
Sbjct: 1 MGQKVHPHGYRLGITTDHRSRWFADSTKPGQRYRDYVREDVEIRKLMATGLERAGIAKVE 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV EI A L+
Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQVQLNILEVKNAEIEAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ IA+QL RV FRRAM++ +QSA R GA G++V +GRL GAE+SR+E Y EGRVPL
Sbjct: 121 AQGIAEQLASRVSFRRAMRKGIQSAQRAGAKGIRVQVAGRLGGAEMSRSEFYREGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
TLRA+IDYG A T +G G+KV++ D + AA +
Sbjct: 181 TLRANIDYGFYEARTTFGRIGVKVWIYKGDITEKEFAAQQAASAPRQGRG 230
>gi|257069502|ref|YP_003155757.1| 30S ribosomal protein S3P [Brachybacterium faecium DSM 4810]
gi|256560320|gb|ACU86167.1| SSU ribosomal protein S3P [Brachybacterium faecium DSM 4810]
Length = 280
Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats.
Identities = 102/211 (48%), Positives = 144/211 (68%), Gaps = 4/211 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQK+NP FRLG+ +SRWFA G Y + ED+ IR + +++AG++K+
Sbjct: 1 MGQKVNPNGFRLGITTEHSSRWFADSSKEGQRYRDYVKEDVAIRSLMSKGMERAGISKVE 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + E++R +L +T +I L++ EV PE +A L+
Sbjct: 61 IERTRDRVRVDLHTARPGIVIGRRGAEAERLRGELEKLTGKQIQLNILEVKNPEADAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ IA+QL RV FRRAM++ +QSA R GA G++V SGRL GAE+SR E Y EGRVPL
Sbjct: 121 AQGIAEQLAARVSFRRAMRKGMQSAQRAGAKGIRVAVSGRLGGAEMSRNEFYREGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
TLRA+IDYG A TA+G G+KV++ D
Sbjct: 181 TLRANIDYGFYEARTAFGRIGVKVWIYKGDV 211
>gi|317178052|dbj|BAJ55841.1| 30S ribosomal protein S3 [Helicobacter pylori F16]
Length = 234
Score = 247 bits (632), Expect = 5e-64, Method: Composition-based stats.
Identities = 107/208 (51%), Positives = 149/208 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ RLG+N W SRWF + + ED KIR++L+ L AGV++I+IER
Sbjct: 1 MGQKVNPVGLRLGINRNWTSRWFPSTRTAPSNIDEDNKIRKFLKKELYYAGVSEIVIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ V +ARPGLIIGKKG DIEK+++ L + E+ +++ EV +P+ +A L A+++
Sbjct: 61 AKKLRVTVVAARPGLIIGKKGVDIEKVKEGLKTLIKKEVSINIKEVKRPQADAQLAAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV FRRAMK+ +Q+A++ GA G+KV SGRL GAE++RTE Y+EGRVPL TLRA
Sbjct: 121 AIQLEKRVAFRRAMKKVMQAALKSGAKGIKVHVSGRLAGAEIARTEWYMEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
IDYG A A T YG G+KV++ + +
Sbjct: 181 KIDYGFAEAMTVYGIIGVKVWIFKGEVL 208
>gi|225873072|ref|YP_002754531.1| ribosomal protein S3 [Acidobacterium capsulatum ATCC 51196]
gi|254764506|sp|C1F636|RS3_ACIC5 RecName: Full=30S ribosomal protein S3
gi|225794492|gb|ACO34582.1| ribosomal protein S3 [Acidobacterium capsulatum ATCC 51196]
Length = 223
Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats.
Identities = 112/218 (51%), Positives = 149/218 (68%), Gaps = 1/218 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLGVN W SRWF +Y LL ED+ ++ L+ LK AGV+ + +ER
Sbjct: 1 MGQKVHPYGFRLGVNKPWRSRWFVE-RDYDKLLVEDVHLKRELKEKLKAAGVSSVEVERP 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+I+ +ARPG+IIG+KG +IEK++ L TN E+ + + EV KPE++A LIA++I
Sbjct: 60 GNKLRLIIRTARPGIIIGRKGAEIEKLKADLQKRTNREVFIDILEVNKPELDAQLIAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV FRRAM++AV SA+RFG G+KV SGRLNG E++R+E YL+GR+PL TLRA
Sbjct: 120 ALQLEKRVGFRRAMRKAVDSALRFGCKGIKVRVSGRLNGNEIARSEWYLQGRLPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
IDYG A A T YG G+K +V D AA
Sbjct: 180 DIDYGFAEAHTTYGIIGVKTWVYRGDIYQQRRREPQAA 217
>gi|295425646|ref|ZP_06818333.1| 30S ribosomal protein S3 [Lactobacillus amylolyticus DSM 11664]
gi|295064662|gb|EFG55583.1| 30S ribosomal protein S3 [Lactobacillus amylolyticus DSM 11664]
Length = 223
Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats.
Identities = 98/220 (44%), Positives = 149/220 (67%), Gaps = 1/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLGV W S+W+A Y L+EDL+IR+Y+ LK + V+ + IER
Sbjct: 1 MGQKINPNGFRLGVIRDWESKWYAD-RGYKETLNEDLRIRKYISDKLKDSSVSTVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++++PG++IGK G+++E +RK+L+ +T+ ++H+++ E+ KP+++A L+A SI
Sbjct: 60 ANRINISIHTSKPGMVIGKGGSEVEALRKELNALTSKQVHINIVEIKKPDLDAELVADSI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRAM++A Q MR GA G ++ SGRLNGA+++R E + EGRVPLQTLRA
Sbjct: 120 ARQLEARVAFRRAMRQASQRTMRAGAKGTRIQISGRLNGADMARREWHTEGRVPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
IDY A T YG G++V+++ + + +
Sbjct: 180 DIDYAWVNAFTTYGEIGVQVWINRGEILPTRKNKSSKPAK 219
>gi|227871796|ref|ZP_03990200.1| ribosomal protein S3 [Oribacterium sinus F0268]
gi|227842359|gb|EEJ52585.1| ribosomal protein S3 [Oribacterium sinus F0268]
Length = 220
Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats.
Identities = 98/220 (44%), Positives = 143/220 (65%), Gaps = 1/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+G+ W+S+W+A + L ED KIRE+L+ L A V+KI IER
Sbjct: 1 MGQKVNPHGMRVGIIKDWDSKWYADKKNFADNLIEDHKIREFLKKKLYSANVSKIEIERA 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
RIIV++A+PG +IGK G +IEK++K + +TN I + + E+ +P+ +A L+A+S
Sbjct: 61 AEDKVRIIVFTAKPGYVIGKGGAEIEKLKKDVQKITNKNIFIDIKEIKRPDRDAQLVAES 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA LE RV FRRA+K+A+ M+ GA G+K GRL GA+++R E Y EG +PLQTLR
Sbjct: 121 IALSLENRVSFRRALKQAMSRTMKAGALGIKASVGGRLGGADIARREFYSEGTIPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
A IDYG A A+T YG G+KV++ + + + + +
Sbjct: 181 ADIDYGFAEADTTYGKLGVKVWIYKGEVLPAKKNKEGSEK 220
>gi|27904936|ref|NP_778062.1| 30S ribosomal protein S3 [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
gi|29427413|sp|P59447|RS3_BUCBP RecName: Full=30S ribosomal protein S3
gi|27904334|gb|AAO27167.1| 30S ribosomal protein S3 [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
Length = 235
Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats.
Identities = 106/222 (47%), Positives = 154/222 (69%), Gaps = 1/222 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS WF+ ++ +L D ++R +L+ L +A V++I+IER
Sbjct: 1 MGQKVHPNGMRLGIIKHWNSVWFSNSKDFAKILDSDYQVRLFLRKELFKASVSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +YSARPG++IGKKG D+EK+R ++N+T +++ E+ KPE++A L+A +I
Sbjct: 61 SKSIRVTIYSARPGIVIGKKGEDVEKLRLSITNITGVPTQINIAEIRKPELDAKLVADNI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QLERR++FRRAMKRAVQ+AMR GA G+KV SGRL G E++R E Y EGRVPL TLRA
Sbjct: 121 VSQLERRIMFRRAMKRAVQNAMRQGAKGIKVEISGRLGGTEIARREWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
I+Y + A T YG G+KV++ + E+ +IP E +
Sbjct: 181 DIEYNVSEAHTTYGVIGVKVWIF-KGEILGGIGSIPKIEKQK 221
>gi|255038095|ref|YP_003088716.1| 30S ribosomal protein S3 [Dyadobacter fermentans DSM 18053]
gi|254950851|gb|ACT95551.1| ribosomal protein S3 [Dyadobacter fermentans DSM 18053]
Length = 275
Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats.
Identities = 96/225 (42%), Positives = 155/225 (68%), Gaps = 2/225 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ W S W+ G ++ L ED KIR Y++ + + ++K++IERT
Sbjct: 1 MGQKVNPIGLRLGIVRGWESSWY-GGKDFSDKLVEDEKIRNYIKARIPKGSISKVVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + +++ARPG++IGK G++++KI+++L +T ++ +++ E+ +PEI+A L+ ++I
Sbjct: 60 LKRITLTIHTARPGIVIGKGGSEVDKIKEELKKITGKDVQINIYEIKRPEIDAKLVGEAI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQL+ R+ +RRAMK+++ SAMR G G+K+ +GRL GAE++RTE Y EGR+PL TLRA
Sbjct: 120 AQQLQARISYRRAMKQSIASAMRVGTQGIKIRLAGRLGGAEMARTEEYKEGRIPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY + A+T YG GIKV++ + E+ P+A ++
Sbjct: 180 DIDYAISEAQTIYGKIGIKVWIF-KGELYGKRDLTPSAATAASDR 223
>gi|116072558|ref|ZP_01469824.1| 30S ribosomal protein S3 [Synechococcus sp. BL107]
gi|116064445|gb|EAU70205.1| 30S ribosomal protein S3 [Synechococcus sp. BL107]
Length = 242
Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats.
Identities = 98/230 (42%), Positives = 142/230 (61%), Gaps = 5/230 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KI+P RLG+ SRW+A Y ALL ED +IR+++ AG++ +LI R
Sbjct: 1 MGHKIHPTGLRLGITQEHRSRWYASSKTYPALLQEDDRIRKFIHKKYGSAGISDVLIARK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117
+ + +ARPG+++G++G+ IE +R + ++ ++V EV + + +A L+A
Sbjct: 61 ADQLEVELKTARPGVLVGRQGSGIEDLRAGIQKTVGDKSRQVRINVVEVERVDGDAFLLA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ IAQQLE+RV FRR ++ AVQ A R G G+K+ SGRLNGAE++RTE EGRVPL T
Sbjct: 121 EYIAQQLEKRVAFRRTIRMAVQRAQRAGVLGLKIQVSGRLNGAEIARTEWTREGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP--AAEHRVVEK 225
LRA IDY T V +T YG GIKV+V + +S+ T+P A R +
Sbjct: 181 LRADIDYATKVGKTTYGVLGIKVWVFKGEVLSEQSQTMPVGANPRRRASR 230
>gi|317014704|gb|ADU82140.1| 30S ribosomal protein S3 [Helicobacter pylori Gambia94/24]
Length = 234
Score = 247 bits (632), Expect = 6e-64, Method: Composition-based stats.
Identities = 107/208 (51%), Positives = 149/208 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ RLG+N W SRWF + + ED KIR++L+ L AGV++I+IER
Sbjct: 1 MGQKVNPVGLRLGINRNWTSRWFPSARTAPSNIDEDNKIRKFLKKELYYAGVSEIVIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ V +ARPGLIIGKKG DIEK+++ L + E+ +++ EV +P+ +A L A+++
Sbjct: 61 AKKLRVTVVAARPGLIIGKKGVDIEKVKEGLKVLIKKEVSINIKEVKRPQADAQLAAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV FRRAMK+ +Q+A++ GA G+KV SGRL GAE++RTE Y+EGRVPL TLRA
Sbjct: 121 ATQLEKRVAFRRAMKKVMQAALKSGAKGIKVRVSGRLAGAEIARTEWYMEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
IDYG A A T YG G+KV++ + +
Sbjct: 181 KIDYGFAEAMTVYGIIGVKVWIFKGEVL 208
>gi|320335517|ref|YP_004172228.1| 30S ribosomal protein S3 [Deinococcus maricopensis DSM 21211]
gi|319756806|gb|ADV68563.1| ribosomal protein S3 [Deinococcus maricopensis DSM 21211]
Length = 247
Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats.
Identities = 110/229 (48%), Positives = 149/229 (65%), Gaps = 3/229 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KINP FRLG+ WNSRW+A Y LL ED +IR ++ LK AG+A+I IER
Sbjct: 1 MGNKINPNGFRLGITKGWNSRWYAGKKTYSKLLQEDERIRNLVEKELKAAGIARIEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119
+ +I+ +A+PG++IGK G I+++R ++ + + + ++V E+P P I+A L+A
Sbjct: 61 GQQVNVIISAAKPGIVIGKGGDSIKRLRGQIEALVSAGTVAVNVAEIPNPNISAPLVALR 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
+A+Q+ERR FRRAMK+A Q M GA GVKV+ SGRL GAE +RTE LEGRVPL TLR
Sbjct: 121 VAEQIERRFAFRRAMKQAAQRVMESGARGVKVVMSGRLGGAEQARTEKVLEGRVPLHTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI--PAAEHRVVEKD 226
A IDYGTA+A T YG GIKV V + + T+ P + R +D
Sbjct: 181 ADIDYGTALARTTYGIIGIKVLVFNGEVIGGKTETLARPPRQDRGRRED 229
>gi|207091942|ref|ZP_03239729.1| 30S ribosomal protein S3 [Helicobacter pylori HPKX_438_AG0C1]
Length = 234
Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats.
Identities = 107/208 (51%), Positives = 149/208 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ RLG+N W SRWF + + ED KIR++L+ L AGV++I+IER
Sbjct: 1 MGQKVNPVGLRLGINRNWTSRWFPSARTAPSSIDEDNKIRKFLKKELYYAGVSEIVIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ V +ARPGLIIGKKG DIEK+++ L + E+ +++ EV +P+ +A L A+++
Sbjct: 61 AKKLRVTVVAARPGLIIGKKGVDIEKVKEGLKTLIKKEVSINIKEVKRPQADAQLAAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV FRRAMK+ +Q+A++ GA G+KV SGRL GAE++RTE Y+EGRVPL TLRA
Sbjct: 121 ATQLEKRVAFRRAMKKVMQAALKSGAKGIKVRVSGRLAGAEIARTEWYMEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
IDYG A A T YG G+KV++ + +
Sbjct: 181 KIDYGFAEAMTVYGIIGVKVWIFKGEVL 208
>gi|33862108|ref|NP_893669.1| 30S ribosomal protein S3 [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
gi|61215695|sp|Q7UZV2|RS3_PROMP RecName: Full=30S ribosomal protein S3
gi|33634326|emb|CAE20011.1| 30S ribosomal protein S3 [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
Length = 243
Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats.
Identities = 97/220 (44%), Positives = 136/220 (61%), Gaps = 3/220 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KINP FRLG+ S+WFA Y LL ED KIR ++Q AG++ +LI R
Sbjct: 1 MGNKINPTGFRLGITQEHRSKWFATSKTYPTLLQEDDKIRTFIQKKYSSAGISDVLIARK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117
+ + +ARPG+I+G++G+ IE++R + ++ ++V EV + + +A L+A
Sbjct: 61 ADQLELELKTARPGVIVGRQGSGIEELRSGIQKTIGDRTRQVRINVVEVERVDADAYLLA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ IAQQLE+RV FRR ++ A+Q A R G G+KV GRLNGAE++RTE EGRVPL T
Sbjct: 121 EYIAQQLEKRVAFRRTIRMALQRAQRAGVLGLKVQVGGRLNGAEIARTEWTREGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
LRA +DY A T YG GIKV+V + + + TIP
Sbjct: 181 LRAEVDYALREANTTYGVLGIKVWVFKGEVLPKEEQTIPV 220
>gi|241895181|ref|ZP_04782477.1| 30S ribosomal protein S3 [Weissella paramesenteroides ATCC 33313]
gi|241871487|gb|EER75238.1| 30S ribosomal protein S3 [Weissella paramesenteroides ATCC 33313]
Length = 222
Score = 247 bits (632), Expect = 7e-64, Method: Composition-based stats.
Identities = 93/222 (41%), Positives = 142/222 (63%), Gaps = 2/222 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KINP R+G+ W+++W+A ++ LHEDLK+REY++ L +A V+++ IERT
Sbjct: 1 MGHKINPTGMRVGIIRDWDAKWYANKKDFATTLHEDLKLREYIEAKLAEASVSRVEIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLIAQ 118
I +++A+PG++IGK G++++ +R +L+ + +H+++ E+ KP+++A L+
Sbjct: 61 ANRVNISIHTAKPGMVIGKGGSEVDALRNELAKLVAKGERVHINIIEIKKPDLDAHLVGS 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
IA L RRV FRRAM+ A+Q AMR GA G+K SGRLNGA+++R E Y EG VPL TL
Sbjct: 121 QIAADLVRRVAFRRAMRSAIQRAMRAGAKGIKTQVSGRLNGADMARVEQYTEGTVPLHTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
RA IDY A T YG G+K ++ D + + S
Sbjct: 181 RADIDYSWDEATTTYGQIGVKTWIYRGDILPEKKSVKKQGGE 222
>gi|284042810|ref|YP_003393150.1| ribosomal protein S3 [Conexibacter woesei DSM 14684]
gi|283947031|gb|ADB49775.1| ribosomal protein S3 [Conexibacter woesei DSM 14684]
Length = 395
Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats.
Identities = 94/210 (44%), Positives = 140/210 (66%), Gaps = 1/210 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+G W S WF+ + L ED IR ++ L AG++ I I +
Sbjct: 1 MGQKVHPESLRVGYIHDWKSNWFSE-KNFSDYLVEDEAIRNHIVGRLSHAGLSDITIRKN 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ + +ARPG++IGK G++++ +R+ L +TN ++ +++ E+ +PE++A L+AQSI
Sbjct: 60 ANEVEVNINTARPGIVIGKSGSEVDALRRDLHRITNKQVKVNILEIKRPELDARLVAQSI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QL+ RV FRRAMKRA+ SAMR GA GVKV SGRL GAE++RTE Y +GRVPL TLRA
Sbjct: 120 AEQLQNRVAFRRAMKRALTSAMRSGAKGVKVQVSGRLGGAEMARTEGYSDGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210
IDYG A T +G G+K +++ + + +
Sbjct: 180 DIDYGFHEARTTFGRIGVKCWINKGEIMPE 209
>gi|154174323|ref|YP_001409148.1| 30S ribosomal protein S3 [Campylobacter curvus 525.92]
gi|171769454|sp|A7H106|RS3_CAMC5 RecName: Full=30S ribosomal protein S3
gi|112802261|gb|EAT99605.1| ribosomal protein S3 [Campylobacter curvus 525.92]
Length = 232
Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats.
Identities = 105/224 (46%), Positives = 148/224 (66%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N W SRWF + + ED KIR +L+ L AG+++ILIERT
Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPTKASLPENIGEDYKIRAFLKKKLYYAGISQILIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ V +ARPG+IIGKKG D+E ++ +S + E+++++ E K + +A L A+++
Sbjct: 61 AKKLRVTVVAARPGIIIGKKGQDVENLKNDVSKLIGKEVNVNIKEERKAQASAQLAAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV FRRAMK+ +Q A + GA G+K+ +GRL GAE++RTE YLEGRVPL TLRA
Sbjct: 121 AMQLEKRVAFRRAMKKVIQGAQKSGAKGIKISVAGRLGGAEMARTEWYLEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
IDYG A A T YG+ GIKV++ + + + +
Sbjct: 181 KIDYGVAEAHTTYGNIGIKVWIFKGEVLQKGVQPEKTEDDAPKK 224
>gi|33864005|ref|NP_895565.1| 30S ribosomal protein S3 [Prochlorococcus marinus str. MIT 9313]
gi|61215701|sp|Q7V537|RS3_PROMM RecName: Full=30S ribosomal protein S3
gi|33635589|emb|CAE21913.1| 30S ribosomal protein S3 [Prochlorococcus marinus str. MIT 9313]
Length = 242
Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats.
Identities = 97/230 (42%), Positives = 142/230 (61%), Gaps = 5/230 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KI+P RLG+ SRW+A Y LL ED +IR ++ AG++ +LI R
Sbjct: 1 MGHKIHPTGLRLGITQEHRSRWYATSKMYPILLQEDDRIRRFIHKKYGAAGISDVLIARK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIA 117
+ + +ARPG+++G++G+ IE++R +K + ++ ++V EV + + +A L+A
Sbjct: 61 ADQLEVELKTARPGVLVGRQGSGIEELRTGIQKTIGDHSRQVRINVVEVERVDADAFLLA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ IAQQLE+RV FRR ++ AVQ A R G G+K+ GRLNGAE++RTE EGRVPL T
Sbjct: 121 EYIAQQLEKRVAFRRTIRMAVQRAQRAGVLGLKIQVGGRLNGAEIARTEWTREGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP--AAEHRVVEK 225
LRA IDY T VA T YG GIKV++ + + D T+P A+ R +
Sbjct: 181 LRAEIDYATKVASTTYGVLGIKVWIFKGEVLGDEAQTMPVGASPRRRGNR 230
>gi|300770245|ref|ZP_07080124.1| 30S ribosomal protein S3 [Sphingobacterium spiritivorum ATCC 33861]
gi|300762721|gb|EFK59538.1| 30S ribosomal protein S3 [Sphingobacterium spiritivorum ATCC 33861]
Length = 268
Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats.
Identities = 104/212 (49%), Positives = 148/212 (69%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ W+S WF G+ Y L ED KIR+YL + + GVAK++IERT
Sbjct: 1 MGQKANPIGSRLGIIKGWDSNWF-GGNNYSDKLVEDEKIRKYLSVRIAKGGVAKVVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + V++ARPG++IGK G +++KI+++L +T ++ +++ E+ +PE++A L+A+ +
Sbjct: 60 LKRITVTVHTARPGIVIGKGGQEVDKIKEELKKLTKKDVQINIFEIKRPELDAKLVAEGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRAMK A+ S MR GA+G+KV+ SGRL GAE++RTE Y EGR PL TLRA
Sbjct: 120 AKQLEARISFRRAMKTAIASTMRMGAEGIKVMCSGRLGGAEMARTEQYKEGRTPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
IDY A A T YG G+KV++ + D
Sbjct: 180 DIDYALAEALTTYGKIGVKVWICKGEVYGKRD 211
>gi|227538712|ref|ZP_03968761.1| 30S ribosomal protein S3 [Sphingobacterium spiritivorum ATCC 33300]
gi|227241631|gb|EEI91646.1| 30S ribosomal protein S3 [Sphingobacterium spiritivorum ATCC 33300]
Length = 269
Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats.
Identities = 104/212 (49%), Positives = 148/212 (69%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ W+S WF G+ Y L ED KIR+YL + + GVAK++IERT
Sbjct: 1 MGQKANPIGSRLGIIKGWDSNWF-GGNNYSDKLVEDEKIRKYLSVRIAKGGVAKVVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + V++ARPG++IGK G +++KI+++L +T ++ +++ E+ +PE++A L+A+ +
Sbjct: 60 LKRITVTVHTARPGIVIGKGGQEVDKIKEELKKLTKKDVQINIFEIKRPELDAKLVAEGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRAMK A+ S MR GA+G+KV+ SGRL GAE++RTE Y EGR PL TLRA
Sbjct: 120 AKQLEARISFRRAMKTAIASTMRMGAEGIKVMCSGRLGGAEMARTEQYKEGRTPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
IDY A A T YG G+KV++ + D
Sbjct: 180 DIDYALAEALTTYGKIGVKVWICKGEVYGKRD 211
>gi|315639315|ref|ZP_07894477.1| 30S ribosomal protein S3 [Campylobacter upsaliensis JV21]
gi|315480641|gb|EFU71283.1| 30S ribosomal protein S3 [Campylobacter upsaliensis JV21]
Length = 233
Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats.
Identities = 107/232 (46%), Positives = 155/232 (66%), Gaps = 6/232 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N W SRWF + + ED KIR +L+ L AG+++IL+ERT
Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPTKANLVENIGEDYKIRAFLKRKLYYAGISQILVERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ V +ARPG+IIGKKG+D++ ++K+L ++ ++++++ E K +A L A+S+
Sbjct: 61 AKKLRVTVVAARPGIIIGKKGSDVDILKKELQDLIKKDVNINIKEERKAGSSAQLAAESV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+R+ FRRAMK+ +Q A + GA G+KV SGRL GAE++RTE YLEGRVPL TLRA
Sbjct: 121 ATQLEKRIAFRRAMKKVIQGAQKAGAKGIKVSVSGRLGGAEMARTEWYLEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV------SDSDSTIPAAEHRVVEKD 226
IDYG A A T YG+ G+KV++ + + ++ PA + R +
Sbjct: 181 KIDYGFAEARTTYGNIGVKVWIFKGEVLQKGFQAEKNEDNAPAKKPRRTRRG 232
>gi|57505350|ref|ZP_00371279.1| ribosomal protein S3 [Campylobacter upsaliensis RM3195]
gi|57016486|gb|EAL53271.1| ribosomal protein S3 [Campylobacter upsaliensis RM3195]
Length = 233
Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats.
Identities = 107/232 (46%), Positives = 155/232 (66%), Gaps = 6/232 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N W SRWF + + ED KIR +L+ L AG+++IL+ERT
Sbjct: 1 MGQKVNPIGLRLGINRNWESRWFPTKANLVENIGEDYKIRAFLKRKLYYAGISQILVERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ V +ARPG+IIGKKG+D++ ++K+L ++ ++++++ E K +A L A+S+
Sbjct: 61 AKKLRVTVVAARPGIIIGKKGSDVDILKKELQDLIKKDVNINIKEERKVGSSAQLAAESV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+R+ FRRAMK+ +Q A + GA G+KV SGRL GAE++RTE YLEGRVPL TLRA
Sbjct: 121 ATQLEKRIAFRRAMKKVIQGAQKAGAKGIKVSVSGRLGGAEMARTEWYLEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV------SDSDSTIPAAEHRVVEKD 226
IDYG A A T YG+ G+KV++ + + ++ PA + R +
Sbjct: 181 KIDYGFAEARTTYGNIGVKVWIFKGEVLQKGFQAEKNEDNAPAKKPRRTRRG 232
>gi|78780029|ref|YP_398141.1| 30S ribosomal protein S3 [Prochlorococcus marinus str. MIT 9312]
gi|91207828|sp|Q318J0|RS3_PROM9 RecName: Full=30S ribosomal protein S3
gi|78713528|gb|ABB50705.1| SSU ribosomal protein S3P [Prochlorococcus marinus str. MIT 9312]
Length = 243
Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats.
Identities = 97/228 (42%), Positives = 139/228 (60%), Gaps = 5/228 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KI+P RLG+ S+WFA Y LL ED KIR ++Q AG++ +LI R
Sbjct: 1 MGHKIHPSGLRLGITQEHRSKWFATSKTYPILLQEDFKIRTFIQKKYGAAGISDVLIARK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117
+ + +ARPG+I+G++G+ IE++R + ++ ++V EV + + +A L+A
Sbjct: 61 ADQLELELKTARPGVIVGRQGSGIEELRAGIQKTIGDNTRQVRINVVEVERVDADAFLLA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ I+QQLE+RV FRR ++ A+Q A R G G+K+ GRLNGAE++RTE EGRVPL T
Sbjct: 121 EYISQQLEKRVAFRRTIRMALQRAQRAGVLGLKIQVGGRLNGAEIARTEWTREGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP--AAEHRVV 223
LRA IDY T A T YG GIKV+V + + + TIP A+ R
Sbjct: 181 LRAEIDYATREANTTYGVLGIKVWVFKGEVLPKEEKTIPVGASPKRKA 228
>gi|282857357|ref|ZP_06266594.1| ribosomal protein S3 [Pyramidobacter piscolens W5455]
gi|282584857|gb|EFB90188.1| ribosomal protein S3 [Pyramidobacter piscolens W5455]
Length = 229
Score = 247 bits (631), Expect = 9e-64, Method: Composition-based stats.
Identities = 92/226 (40%), Positives = 149/226 (65%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI +R+GV W S+W+A G Y LHED+K+R +++ + AG++++ IER
Sbjct: 1 MGQKVHPIGYRIGVIRDWESKWYAVGKNYVKNLHEDIKLRSWIKKRWEGAGISRVEIERV 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R +++ARPG++IGK+G ++ K++ +L +T + + L+V E+ P+++A L+A+ I
Sbjct: 61 GKVIRFTLWTARPGVVIGKQGAELTKVKDELQALTGTRVMLNVQEIKNPDVDAQLVAEGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A LERRV FRRAMK+A+ M+ G G+K+ SGRL GAE++RTE Y +GR+PL TLRA
Sbjct: 121 ASALERRVSFRRAMKQAMFRTMKAGGLGIKIQCSGRLGGAEIARTEWYNDGRLPLSTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
+DY A T YG+ G+K ++ ++ ++ + P +
Sbjct: 181 DVDYSCVKAVTMYGAIGVKCWIYRDEKALNTAAPRPVRSRANKREG 226
>gi|291521892|emb|CBK80185.1| SSU ribosomal protein S3P [Coprococcus catus GD/7]
Length = 220
Score = 247 bits (630), Expect = 9e-64, Method: Composition-based stats.
Identities = 102/211 (48%), Positives = 144/211 (68%), Gaps = 3/211 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV WNSRW+A +++ L ED KIR YL+ L AGV+KI IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWNSRWYAD-ADFADNLIEDHKIRTYLKKRLYSAGVSKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++IVY+A+PG++IG++G++IEK++ +L TN ++ + + EV PE +A L+A++I
Sbjct: 60 SDRVKVIVYTAKPGVVIGRQGSEIEKVKAELKQFTNKKLLIDIKEVKLPECDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRF--GADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
A QLE R+ FRRAMK ++Q MR G G+K SGRL GA+++RTE Y EG +PLQTL
Sbjct: 120 AAQLENRISFRRAMKSSMQKTMRSRGGVKGIKTSVSGRLGGADMARTEFYSEGTIPLQTL 179
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVS 209
RA IDYG A A T YG G+K ++ + +
Sbjct: 180 RADIDYGFAEANTTYGKVGVKTWIYHGEVLP 210
>gi|261885695|ref|ZP_06009734.1| 30S ribosomal protein S3 [Campylobacter fetus subsp. venerealis
str. Azul-94]
Length = 232
Score = 247 bits (630), Expect = 9e-64, Method: Composition-based stats.
Identities = 108/231 (46%), Positives = 152/231 (65%), Gaps = 5/231 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+N I RLG+N W SRWF + + ED KIR++L+ L AGV++IL+ERT
Sbjct: 1 MGQKVNTIGLRLGINRNWESRWFPSKATLPENIGEDYKIRKFLKTKLYYAGVSQILVERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ V +ARPG+IIGKKG +IE +R +++ + N +I +++ E K +A L A+++
Sbjct: 61 AKKLRVTVVAARPGIIIGKKGGEIENLRSEVTKLVNKDIAINIKEERKAGSSAQLAAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV FRRAMK+ +Q A + GA G+KV +GRL GAE++RTE YLEGRVPL TLRA
Sbjct: 121 AMQLERRVAFRRAMKKVIQGAQKAGAKGIKVSVAGRLGGAEMARTEWYLEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV-----SDSDSTIPAAEHRVVEKD 226
IDYG A A T YG+ G+KV++ + + +D + + R +
Sbjct: 181 RIDYGFAEAHTTYGNIGVKVWIFKGEVLQKGIQADKNEDTSPKKPRRARRG 231
>gi|78185528|ref|YP_377962.1| 30S ribosomal protein S3 [Synechococcus sp. CC9902]
gi|123743495|sp|Q3AUX0|RS3_SYNS9 RecName: Full=30S ribosomal protein S3
gi|78169822|gb|ABB26919.1| SSU ribosomal protein S3P [Synechococcus sp. CC9902]
Length = 242
Score = 247 bits (630), Expect = 9e-64, Method: Composition-based stats.
Identities = 96/230 (41%), Positives = 142/230 (61%), Gaps = 5/230 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KI+P RLG+ SRW+A Y +LL ED +IR+++ AG++ +LI R
Sbjct: 1 MGHKIHPTGLRLGITQEHRSRWYASSKTYPSLLQEDDRIRKFIHKKYGSAGISDVLIARK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117
+ + +ARPG+++G++G+ IE +R + ++ ++V EV + + +A L+A
Sbjct: 61 ADQLEVELKTARPGVLVGRQGSGIEDLRAGIQKTVGDKSRQVRINVVEVERVDGDAFLLA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ IAQQLE+RV FRR ++ AVQ A R G G+K+ SGRLNGAE++RTE EGRVPL T
Sbjct: 121 EYIAQQLEKRVAFRRTIRMAVQRAQRAGVLGLKIQVSGRLNGAEIARTEWTREGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP--AAEHRVVEK 225
LRA IDY T V +T YG GIKV+V + +++ T+P A R +
Sbjct: 181 LRADIDYATKVGKTTYGVLGIKVWVFKGEVLNEQSQTMPVGANPRRRASR 230
>gi|256371221|ref|YP_003109045.1| ribosomal protein S3 [Acidimicrobium ferrooxidans DSM 10331]
gi|256007805|gb|ACU53372.1| ribosomal protein S3 [Acidimicrobium ferrooxidans DSM 10331]
Length = 288
Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats.
Identities = 102/210 (48%), Positives = 145/210 (69%), Gaps = 2/210 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLGV W SRW+A +Y L ED +IR++LQ L+ A V+++ IERT
Sbjct: 1 MGQKVHPYGFRLGVTTDWKSRWYAD-KDYQRWLIEDEQIRQWLQRELRTASVSRVDIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS-EIHLSVNEVPKPEINATLIAQS 119
R+ +++ARPG++IGKKG ++E++R++L + L+V E+ +P+++AT++AQS
Sbjct: 60 RDRVRVDIHTARPGIVIGKKGVEVERLRRELERRCAPARVQLNVEEIRQPDLDATIVAQS 119
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA Q+ RRV FRRAMKRA+Q AM+ GA G+ SGRL GAE++R E + EGRVP TLR
Sbjct: 120 IADQISRRVSFRRAMKRAIQVAMKEGARGITAQCSGRLGGAEMARRETHREGRVPRHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVS 209
A ID+G A T YG G+KV++ D V
Sbjct: 180 ADIDFGLREARTTYGQIGVKVWIYKGDVVP 209
>gi|168187808|ref|ZP_02622443.1| ribosomal protein S3 [Clostridium botulinum C str. Eklund]
gi|169294315|gb|EDS76448.1| ribosomal protein S3 [Clostridium botulinum C str. Eklund]
Length = 221
Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats.
Identities = 97/221 (43%), Positives = 146/221 (66%), Gaps = 1/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+GV W+++W+A + L ED KIR++++ AG+AKI IERT
Sbjct: 1 MGQKVHPHGLRVGVIKDWDAKWYANSHNFADNLIEDNKIRKFVKKKSYSAGIAKIEIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119
K +I +++ +PG+IIGK G IE+++ ++ M + +++ EV +PE +A L++++
Sbjct: 61 AKRVKINIHTGKPGMIIGKGGKGIEELKSEILKMIKEKNVIINIVEVKRPETDAQLMSEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
+AQQLE+R+ FRRAMK+ +Q AMR GA GVK+ SGRL GAE++RTE Y EG +PLQTLR
Sbjct: 121 VAQQLEKRISFRRAMKQTIQRAMRSGAKGVKIACSGRLGGAEIARTEQYHEGTIPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
A IDYG A A+T YG G+KV++ + +
Sbjct: 181 ADIDYGFAEADTTYGKIGVKVWLYKGEVLPTKKVRTEQISQ 221
>gi|299139136|ref|ZP_07032312.1| ribosomal protein S3 [Acidobacterium sp. MP5ACTX8]
gi|298598816|gb|EFI54978.1| ribosomal protein S3 [Acidobacterium sp. MP5ACTX8]
Length = 223
Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats.
Identities = 107/218 (49%), Positives = 149/218 (68%), Gaps = 1/218 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG+N W SRWF + LL ED+K++ L+ LK AGV+ + +ER
Sbjct: 1 MGQKVHPYGFRLGINKPWKSRWFTE-RGFDKLLVEDVKLKAELREKLKAAGVSSVEVERP 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+I+ +ARPG+IIG+KG +I+K++ + TN E+ + + EV KPE++A L+A++I
Sbjct: 60 GNKLRLIIRTARPGIIIGRKGAEIDKLKADIQKRTNREVFIDILEVNKPELDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV FRRAM+++V SA+RFG G+KV SGRLNG E++R+E YL+GR+PL TLRA
Sbjct: 120 ALQLEKRVSFRRAMRKSVDSALRFGCKGIKVRVSGRLNGNEIARSEWYLQGRLPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
IDYG A A T YG G+K +V D PA
Sbjct: 180 DIDYGFAEAHTTYGIIGVKTWVYRGDIYEQKKRREPAP 217
>gi|291166873|gb|EFE28919.1| 30S ribosomal protein S3 [Filifactor alocis ATCC 35896]
Length = 265
Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats.
Identities = 102/221 (46%), Positives = 148/221 (66%), Gaps = 1/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+GVN W+SRWFA ++ A + ED IRE+++ L AG++KI IER
Sbjct: 1 MGQKVSPHGLRVGVNKNWDSRWFANKKDFAANIKEDSVIREFVKKKLYLAGISKIEIERQ 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119
K R+ +++A+PG IIGK G IE+++ + + ++ ++V EV +PE++A L+A++
Sbjct: 61 GKTVRLNIFTAQPGRIIGKGGQGIEELKLDVEKICKDKQVFVNVVEVKRPEVDAQLVAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA LERR+ FRRAMK+A+Q AMR GA G+KV SGR+ GAE++RTE Y EG VPL TLR
Sbjct: 121 IALALERRIAFRRAMKQAMQRAMRAGAKGIKVSTSGRVGGAEMARTEGYAEGNVPLHTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
A I YG A A+T YG G+KV++ + + + E
Sbjct: 181 ADIGYGFAEADTTYGKLGVKVWICNGEILPTRNGPKREIED 221
>gi|226226285|ref|YP_002760391.1| 30S ribosomal protein S3 [Gemmatimonas aurantiaca T-27]
gi|259495248|sp|C1A6R1|RS3_GEMAT RecName: Full=30S ribosomal protein S3
gi|226089476|dbj|BAH37921.1| 30S ribosomal protein S3 [Gemmatimonas aurantiaca T-27]
Length = 219
Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats.
Identities = 108/212 (50%), Positives = 148/212 (69%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI FRLGV W S W+A E ALL ED +R+YL+ L A +A + IER
Sbjct: 1 MGQKTNPIGFRLGVTKNWRSTWYA-KKEMPALLKEDALLRKYLKARLDNAAIADVTIERK 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ V++ RPG++IGKKG +++K+R +L+ +T E+ ++V E+ +PE+ A L+A +I
Sbjct: 60 PGKVVVTVHTGRPGVVIGKKGAEVDKLRDELAQLTGKEVGINVEEIKRPEVEAQLVADNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL +R+ FRRAMKRAVQSAMR GA G+KV A GRL GAE++R E Y+EGRVPL TLRA
Sbjct: 120 AAQLSQRISFRRAMKRAVQSAMRMGALGIKVKAGGRLGGAEIARVEGYMEGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
I+Y T+ A+T YG+ G+KV++ + V D
Sbjct: 180 DINYATSTAKTTYGTIGVKVWIFKGEIVEDRR 211
>gi|328953152|ref|YP_004370486.1| ribosomal protein S3 [Desulfobacca acetoxidans DSM 11109]
gi|328453476|gb|AEB09305.1| ribosomal protein S3 [Desulfobacca acetoxidans DSM 11109]
Length = 216
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 109/214 (50%), Positives = 151/214 (70%), Gaps = 3/214 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQ--CHLKQAGVAKILIE 58
MGQK++P+ FRLG W+S WFAR Y LL ED KIR++++ L+ AG+A I IE
Sbjct: 1 MGQKVHPVGFRLGSYRRWHSYWFAR-KNYSDLLLEDQKIRKFIKNEKELQGAGIAAIDIE 59
Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118
R ++ ++++RPG++IG+KG IE++R+KL + E+ + ++EV KPE+NA L+A+
Sbjct: 60 RAANKVKMKIHTSRPGIVIGQKGKKIEELRQKLQRLIGRELIVDIHEVRKPELNAQLVAE 119
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
+IA QLERRV FRRAMK+AV AM+FGA G+KV +GRL GAE++R E Y EGRVPL TL
Sbjct: 120 NIALQLERRVAFRRAMKKAVGQAMKFGAQGIKVRVAGRLGGAEMARREWYREGRVPLHTL 179
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
RA IDYG A A T YG GIK ++ + +S+
Sbjct: 180 RADIDYGVAEARTTYGVIGIKAWIFKGEILSEDR 213
>gi|315925250|ref|ZP_07921464.1| 30S ribosomal protein S3 [Pseudoramibacter alactolyticus ATCC
23263]
gi|315621484|gb|EFV01451.1| 30S ribosomal protein S3 [Pseudoramibacter alactolyticus ATCC
23263]
Length = 240
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 99/226 (43%), Positives = 149/226 (65%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+N FR+GV WN++W+A + L ED K+R+Y++ QAG++KI+IER
Sbjct: 1 MGQKVNAFGFRVGVIKDWNAKWYANDKNFADNLIEDNKLRQYIKTSQFQAGISKIVIERF 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
RI +Y+A+PG+IIG+ G I+ ++ +L M + +++ EV +++A LIA++I
Sbjct: 61 GNKVRIHIYTAKPGMIIGRGGAGIDALKAELEKMIKKTVFINIVEVKNIDMDAQLIAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR+ FRRAMK+A+Q MR GA G+K + SGRLNGAE++R E Y +G VP+QTLRA
Sbjct: 121 AGQLERRISFRRAMKQAMQRTMRAGAKGIKTLVSGRLNGAEIARKEGYAQGNVPMQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
I YG A A+T YG G+KV+V+ + ++ + + A +
Sbjct: 181 DISYGFAEADTTYGKLGVKVWVNKGEILTGREDVLADAAKADSSRG 226
>gi|237751230|ref|ZP_04581710.1| 30s ribosomal protein s3 [Helicobacter bilis ATCC 43879]
gi|229372596|gb|EEO22987.1| 30s ribosomal protein s3 [Helicobacter bilis ATCC 43879]
Length = 229
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 108/220 (49%), Positives = 145/220 (65%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N W SRWF + ED IR++L+ L A V++I+IER
Sbjct: 1 MGQKVNPIGLRLGINRNWTSRWFPNAQNTPERIGEDHIIRKFLKKELYYASVSEIIIERM 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ V +A+PGLIIGKKG DIEK+++ L + N ++ +++ EV + + NA L A+S+
Sbjct: 61 ATKLRVTVVAAKPGLIIGKKGADIEKVKETLRKLVNKDVAINIKEVKRAQANAQLAAESV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV FRRAMK+ +Q AM+ GA G+KV SGRL GAE++RTE Y+EGRVPL TLRA
Sbjct: 121 AMQLERRVAFRRAMKKVMQQAMKSGAKGIKVKVSGRLAGAEMARTEWYMEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
IDYG A A T YG G+KV++ + + T
Sbjct: 181 KIDYGFAEAATTYGIIGVKVWIFKGEVLQKGIQTEREESK 220
>gi|295101420|emb|CBK98965.1| SSU ribosomal protein S3P [Faecalibacterium prausnitzii L2-6]
Length = 234
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 98/230 (42%), Positives = 135/230 (58%), Gaps = 12/230 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+SRWFA ++ L ED KIR L+ LK AGV KI IERT
Sbjct: 1 MGQKVNPHGIRVGVIKDWDSRWFASKKDFSDNLVEDHKIRTELKAQLKDAGVPKIEIERT 60
Query: 61 HK------NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINAT 114
+ +Y A+PG++IGK G + ++ KL+ + ++V EV NA
Sbjct: 61 VDPSTSAPRVTVNIYCAKPGMVIGKGGEERVALQNKLTKEYGKTVIVNVIEVKSAATNAQ 120
Query: 115 LIAQSIAQQLERRVVFRRAMKRAVQSAMRFGA------DGVKVIASGRLNGAELSRTECY 168
L+A+ IA+QLE RV FRRAMK+ +++AM G+K + SGRL GA+++R E Y
Sbjct: 121 LVAEDIARQLENRVTFRRAMKQCMRNAMSPRDRATVPAKGIKAMCSGRLGGADIARVESY 180
Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
EG +PLQTLRA IDYG A A T YG G+KV+V + + + +
Sbjct: 181 HEGTIPLQTLRADIDYGFAEAATTYGRIGVKVWVYKGEVLKSAKNAQKKE 230
>gi|160894750|ref|ZP_02075525.1| hypothetical protein CLOL250_02301 [Clostridium sp. L2-50]
gi|156863684|gb|EDO57115.1| hypothetical protein CLOL250_02301 [Clostridium sp. L2-50]
Length = 221
Score = 246 bits (629), Expect = 2e-63, Method: Composition-based stats.
Identities = 95/211 (45%), Positives = 137/211 (64%), Gaps = 2/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE--YGALLHEDLKIREYLQCHLKQAGVAKILIE 58
MGQK+NP R+GV W+SRW+A + L ED KIR YL+ L A ++KI IE
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWYADTKNDEFSNNLVEDHKIRTYLKKTLYNANISKIEIE 60
Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118
R ++ +Y+A+PG+IIGK G IEKI+ +T+ ++ + V E+ KP+ +A L+A+
Sbjct: 61 RAADRVKVALYTAKPGVIIGKGGAGIEKIKADAQKLTDKKLFIDVKEIKKPDADAQLVAE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
+IA QLE R+ FR+AMK + M+ GA G+K SGRL GA+++RTE Y +G +PLQTL
Sbjct: 121 NIAAQLENRISFRKAMKSCMSRTMKTGALGIKASCSGRLGGADMARTEFYSQGTIPLQTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVS 209
RA IDYG A A+T +G G+K +V + +
Sbjct: 181 RADIDYGFAEADTTFGKVGVKTWVYHGEVLP 211
>gi|260655377|ref|ZP_05860865.1| ribosomal protein S3 [Jonquetella anthropi E3_33 E1]
gi|260629825|gb|EEX48019.1| ribosomal protein S3 [Jonquetella anthropi E3_33 E1]
Length = 227
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 95/226 (42%), Positives = 154/226 (68%), Gaps = 3/226 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI +R+GV W S+W+A G Y LH+DLK+RE+++ + +G++++ IER
Sbjct: 1 MGQKVHPIGYRIGVIRDWESKWYASGKNYHESLHQDLKLREWIKSRWEGSGISRVEIERV 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R +++ARPG++IGK+G +I K+++ L T + + ++V E+ PE++A L+A+++
Sbjct: 61 GKIMRFTIWTARPGVVIGKQGAEINKLKEDLQAKTGTRVMINVQEIKNPEVDAQLVAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
+ LE R+ FRRAMK+ + MR G G+K+ SGRL GAE++RTE Y EGR+PL TLRA
Sbjct: 121 SSALENRISFRRAMKQGLFRTMRAGGLGIKIQCSGRLGGAEIARTEWYNEGRLPLSTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
+DYG +VA+T YG+ G+KV++ ++ + T + R K+
Sbjct: 181 DVDYGLSVAKTMYGTIGVKVWIYRDEKAIN---TAAPRQPRRGRKE 223
>gi|261415813|ref|YP_003249496.1| ribosomal protein S3 [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|261372269|gb|ACX75014.1| ribosomal protein S3 [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|302326260|gb|ADL25461.1| ribosomal protein S3 [Fibrobacter succinogenes subsp. succinogenes
S85]
Length = 219
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 104/220 (47%), Positives = 153/220 (69%), Gaps = 1/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K +P RLGV W S+W+A + LL+ED+ +R YL + A ++K+ IERT
Sbjct: 1 MGHKTHPNGLRLGVIRGWESKWYAEDK-FADLLYEDIVLRRYLMKRFEHASLSKVGIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + +Y+ARPG++IGKKG ++E+++ +L +T EI+++V+E+ +PE +A L+A++I
Sbjct: 60 VKKVNVNLYTARPGIVIGKKGEELERLKGELQFLTGKEIYIAVHEIKRPETDAKLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE+R+ FRRAMKRA+QSAMR G +G+KV GRL GAE++R E Y EGRVPL TLRA
Sbjct: 120 ARQLEKRISFRRAMKRAIQSAMRMGVEGIKVQCGGRLGGAEIARVEKYAEGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
IDY TA+A+T YG+ GIKV++ +++ E
Sbjct: 180 DIDYATAIAKTVYGAIGIKVWIMHGEKIGKDVMNDNKREK 219
>gi|329942417|ref|ZP_08291227.1| ribosomal protein S3 [Chlamydophila psittaci Cal10]
gi|313847654|emb|CBY16642.1| 30S ribosomal protein s3 [Chlamydophila psittaci RD1]
gi|325507321|gb|ADZ18959.1| 30S ribosomal protein S3 [Chlamydophila psittaci 6BC]
gi|328815327|gb|EGF85315.1| ribosomal protein S3 [Chlamydophila psittaci Cal10]
gi|328914291|gb|AEB55124.1| ribosomal protein S3 [Chlamydophila psittaci 6BC]
Length = 223
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 105/218 (48%), Positives = 148/218 (67%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK PI FR GV W S W+ E+G L ED+KIRE+L+ G A ++ R
Sbjct: 1 MGQKGCPIGFRTGVTKKWRSLWYGNKQEFGKFLIEDVKIREFLRKKPSCQGAAGFVVRRM 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ + +ARPGL+IGKKG +++ ++++L +T E+ + + E+ +PE+NA L+A +I
Sbjct: 61 SGKIEVTIQTARPGLVIGKKGAEVDLLKEELRKLTGKEVWVEIAEIKRPELNAKLVADNI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+ERRV FRRAMK+A+QS M GA GVK+ SGRL GAE++R+E Y GRVPL TLRA
Sbjct: 121 AKQIERRVSFRRAMKKAMQSVMDAGAVGVKIQVSGRLAGAEIARSEWYKNGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
IDY TA A T YG G+KV+++L ++VS + S + AA
Sbjct: 181 DIDYATASAATTYGIIGVKVWINLGEKVSTASSNVGAA 218
>gi|312899049|ref|ZP_07758433.1| ribosomal protein S3 [Megasphaera micronuciformis F0359]
gi|310619834|gb|EFQ03410.1| ribosomal protein S3 [Megasphaera micronuciformis F0359]
Length = 223
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 95/220 (43%), Positives = 152/220 (69%), Gaps = 1/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+N FR+GV W+++W+A +Y LL+ED++IRE+L+ L AGV++I IER+
Sbjct: 1 MGQKVNAHGFRVGVVKPWDAKWYAE-KDYATLLNEDVRIREFLKKQLYIAGVSRIEIERS 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K ++I+++A+PG++IG+ G IE I+K L T+ + +++ E+ + E++ATL+A+++
Sbjct: 60 AKRIKLIIHTAKPGMVIGRGGAGIEDIKKALKAFTDKTVDVNIAEIKQSELDATLVAENV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR+ FRRAMK+++ MR GA G+K++ SGRL GAE++R+E +G +PL T+RA
Sbjct: 120 ASQLERRIGFRRAMKQSIGRTMRMGAQGIKIMCSGRLGGAEIARSESVRDGSIPLHTIRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
IDYGTA A T YG GIK ++ + + ++
Sbjct: 180 DIDYGTAEAHTTYGCIGIKCWIYKGEILPEAKKAPQNKRE 219
>gi|320160420|ref|YP_004173644.1| 30S ribosomal protein S3 [Anaerolinea thermophila UNI-1]
gi|319994273|dbj|BAJ63044.1| 30S ribosomal protein S3 [Anaerolinea thermophila UNI-1]
Length = 225
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 102/219 (46%), Positives = 149/219 (68%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG+K+NP+ FRL VN W SRWFA G EY L +D +IR+ ++ + AGV+++ +ER
Sbjct: 1 MGRKVNPVGFRLVVNKAWESRWFADGKEYTQNLQQDFQIRKLVREIAENAGVSRVEVERF 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+IV++A+PG++IG+KG ++K+R+ L +T +I L + E+ P+ +A L+A+++
Sbjct: 61 PGKVRVIVFTAKPGILIGRKGESVKKLRQDLEALTGKKIDLEIKEIKNPDTDALLVAENL 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A Q+ERRV +RRAMKRA+Q AMR GA G+KV GRL+GAE+SR+ EGRVPLQTLRA
Sbjct: 121 ASQIERRVSYRRAMKRALQQAMRQGAKGIKVEVQGRLSGAEMSRSVWLREGRVPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
ID+ A A T YG G+KV+V + + + E
Sbjct: 181 DIDFARAEALTTYGRIGVKVWVYKGEMAPEVEEKAEPTE 219
>gi|315453729|ref|YP_004073999.1| 30S ribosomal protein S3 [Helicobacter felis ATCC 49179]
gi|315132781|emb|CBY83409.1| 30S ribosomal protein S3 [Helicobacter felis ATCC 49179]
Length = 235
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 112/208 (53%), Positives = 150/208 (72%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N W SRWF + + ED +IR++L+ L AGV++I+IER
Sbjct: 1 MGQKVNPIGLRLGINKNWASRWFPGTHDTVQNIEEDHRIRKFLKKELYYAGVSEIVIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K RI V +ARPGLIIGK+G DIEKI+ L N+ +I LS+ EV +P+ +A L+A+++
Sbjct: 61 AKKLRITVVAARPGLIIGKQGVDIEKIKVSLKNLIKRDIALSIKEVKRPQADAQLVAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV FRRAMK+ +Q+AM+ GA G+KV SGRL GAE++RTE Y+EGRVPL TLRA
Sbjct: 121 ATQLEKRVAFRRAMKKVMQTAMKSGARGIKVRVSGRLAGAEIARTEWYMEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
IDYG A A T YG G+KV++ + +
Sbjct: 181 KIDYGFAEAMTVYGIIGVKVWIFKGEVL 208
>gi|313677126|ref|YP_004055122.1| SSU ribosomal protein s3p [Marivirga tractuosa DSM 4126]
gi|312943824|gb|ADR23014.1| SSU ribosomal protein S3P [Marivirga tractuosa DSM 4126]
Length = 244
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 103/227 (45%), Positives = 153/227 (67%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGS-EYGALLHEDLKIREYLQCHLKQAGVAKILIER 59
MGQK+NPI FRLG+ W S W+ + L ED KIREY+ + + G++KI+IER
Sbjct: 1 MGQKVNPIGFRLGIVRGWESNWYGGKGLSFSDKLIEDQKIREYILARIPKGGISKIVIER 60
Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
T K + V++ARPG++IGK G++++K++++L +TN ++ +++ E+ +PE++A LI +S
Sbjct: 61 TLKRITLTVHTARPGVVIGKGGSEVDKLKEELKKLTNKDVQINIFEIKRPELDAKLIGES 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
I QQL+ R+ +RRAMK+A+ SAMR GA G+K+ SGRL GAE++RTE Y EGR+PL TLR
Sbjct: 121 IGQQLKARISYRRAMKQAIASAMRVGAQGIKIKVSGRLGGAEMARTEMYKEGRIPLHTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
A IDY T A T YG+ G+KV+V + D ++ K
Sbjct: 181 ADIDYETTPAHTIYGTIGVKVWVFKGEVFGKRDLSLNVGAGAPGNKG 227
>gi|149072015|ref|YP_001293586.1| 30S ribosomal protein S3 [Rhodomonas salina]
gi|172048718|sp|A6MW07|RR3_RHDSA RecName: Full=30S ribosomal protein S3, chloroplastic
gi|134302966|gb|ABO70770.1| 30S ribosomal protein S3 [Rhodomonas salina]
Length = 218
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 94/211 (44%), Positives = 138/211 (65%), Gaps = 2/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRL + T S WFA Y L ED IR Y++ +L AG++K+ I R
Sbjct: 1 MGQKVHPLGFRLRITQTHRSSWFASSKNYPETLAEDYAIRNYVKVNLSSAGISKVEIHRK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATLIAQ 118
+ ++++RPG+I+G+ G+ I+ I++ L + N +I ++V E+ + +A LIA+
Sbjct: 61 SDQVELEIHTSRPGIIVGRSGSGIDTIKEDLRKIINKNNQIRINVTELKNVDADANLIAE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
IAQQLE+R+ FRRA ++A+Q A R G+KV SGRLNGAE++R+E EGRVPLQTL
Sbjct: 121 FIAQQLEKRIAFRRATRQAIQRAQRANVQGIKVQVSGRLNGAEIARSEWVREGRVPLQTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVS 209
RA IDY T A+T YG G+KV+V ++
Sbjct: 181 RADIDYATKEADTTYGKLGVKVWVFNGEKTP 211
>gi|255530520|ref|YP_003090892.1| 30S ribosomal protein S3 [Pedobacter heparinus DSM 2366]
gi|255343504|gb|ACU02830.1| ribosomal protein S3 [Pedobacter heparinus DSM 2366]
Length = 285
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 100/212 (47%), Positives = 147/212 (69%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +PI RLG+ W+S WF G+ Y L ED KIR+YL + + GVAK++IERT
Sbjct: 1 MGQKAHPIGNRLGIIKGWDSNWF-GGNNYADKLVEDEKIRKYLSARIAKGGVAKVVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + +++ARPG++IGK G +++KI+++L +T EI +++ E+ +PE++A L+A+ +
Sbjct: 60 LKRITVTIHTARPGIVIGKAGQEVDKIKEELKKLTKKEIQINIFEIKRPELDAQLVAEGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRAMK + S MR GA+G+K++ SGRL GAE++R+E Y EGR+PL T RA
Sbjct: 120 AKQLEARISFRRAMKSTIASTMRMGAEGIKIMTSGRLGGAEMARSEQYKEGRIPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
IDY A A T YG G+KV++ + D
Sbjct: 180 DIDYALAEALTTYGKIGVKVWICKGEVYGKRD 211
>gi|269958590|ref|YP_003328377.1| 30S ribosomal protein S3 [Anaplasma centrale str. Israel]
gi|269848419|gb|ACZ49063.1| 30S ribosomal protein S3 [Anaplasma centrale str. Israel]
Length = 211
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 106/206 (51%), Positives = 148/206 (71%), Gaps = 1/206 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RL + TW+S W+A G Y + LHEDL +R +++ A V++++I R
Sbjct: 1 MGQKSNPIGLRLRIVGTWDSLWYANGG-YASKLHEDLLLRSFVKKTFHHAAVSRVVIARK 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ ++SARPG+IIGKKGTDI++++++++ M N ++ L + EV KP++ A LIA++I
Sbjct: 60 VDAVIVNIHSARPGVIIGKKGTDIDRVKQRIAKMVNHDVELHIVEVKKPDLKAALIAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+RV FRRAMKR VQ+ ++ GA GVKV SGRL GAE++RTE Y EG VPL T RA
Sbjct: 120 AQQLEKRVSFRRAMKRGVQNCLKLGARGVKVSCSGRLGGAEIARTEWYKEGSVPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRD 206
+IDY A A+T YG G+KV+V + D
Sbjct: 180 NIDYSCAEAKTIYGIVGVKVWVHVGD 205
>gi|225849542|ref|YP_002729707.1| ribosomal protein S3 [Sulfurihydrogenibium azorense Az-Fu1]
gi|225643333|gb|ACN98383.1| ribosomal protein S3 [Sulfurihydrogenibium azorense Az-Fu1]
Length = 226
Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 106/225 (47%), Positives = 156/225 (69%), Gaps = 1/225 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI FRLG+ W S+W+A +Y LLHEDL IR+++Q K AG+A ++IER
Sbjct: 1 MGQKVHPIGFRLGITQDWRSKWYADKKKYTKLLHEDLAIRQFIQDRYKAAGIADVIIERL 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119
R+ + +ARPG++IG KGT++EK+ + L N+++ EI ++V+EV +PE+NA L+A+
Sbjct: 61 GDKLRVKILAARPGIVIGAKGTEVEKLNETLKNISSAKEILINVDEVKRPELNAKLVAED 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA QLERRV RRAMK+A+ +AM+ GA G+K GR+ G +L+R E ++ GR+PLQTL+
Sbjct: 121 IALQLERRVTHRRAMKKAIDAAMKAGAKGIKTQVGGRIGGVDLARKEWFMAGRMPLQTLK 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
A IDYGTA A T YG G+KV++ D+V I + ++
Sbjct: 181 ADIDYGTARASTKYGILGVKVWIYKGDKVESRVEEILSKVEEELK 225
>gi|160881779|ref|YP_001560747.1| ribosomal protein S3 [Clostridium phytofermentans ISDg]
gi|189044971|sp|A9KJI8|RS3_CLOPH RecName: Full=30S ribosomal protein S3
gi|160430445|gb|ABX44008.1| ribosomal protein S3 [Clostridium phytofermentans ISDg]
Length = 219
Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 98/220 (44%), Positives = 146/220 (66%), Gaps = 1/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+SRW+A +++ L ED IR YL+ L AGVAKI IER
Sbjct: 1 MGQKVNPHGLRVGVINDWDSRWYAE-ADFADNLVEDYNIRTYLKKKLYSAGVAKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++I+++A+PG++IGK G +IEK++ +++ T +++L + E+ KP++ A L+A+SI
Sbjct: 60 SDKLKVIIHTAKPGVVIGKGGAEIEKLKVEITQYTTKKLNLEIKEIKKPDVCAQLVAESI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE R+ FRRAMK + MR GA G+K SGRL GA+++RTE Y EG +PLQTLRA
Sbjct: 120 AAQLENRISFRRAMKSTMSRTMRSGAKGIKTAVSGRLGGADMARTEFYSEGTIPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
IDYG A A+T +G G+K ++ + + + ++
Sbjct: 180 DIDYGFAEADTTFGKLGVKAWIYHGEVLPTKGNKKEGSDK 219
>gi|313904946|ref|ZP_07838317.1| ribosomal protein S3 [Eubacterium cellulosolvens 6]
gi|313470203|gb|EFR65534.1| ribosomal protein S3 [Eubacterium cellulosolvens 6]
Length = 218
Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 93/211 (44%), Positives = 144/211 (68%), Gaps = 1/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+G+ W+S+W+A +++ L ED KIR YL+ L +GV++I IER
Sbjct: 1 MGQKVNPHGLRVGIIKDWDSKWYAE-ADFADNLVEDYKIRTYLKKRLYTSGVSQIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I +++++PG++IGK G++IEK++K+L T ++ + + EV +P+ +A L+A++I
Sbjct: 60 SDRVKITIFTSKPGVVIGKGGSEIEKVKKELKQFTEKKLVVDIKEVKRPDRDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE R+ +RRAMK A+Q MR GA G+K SGR+ GA+++R E Y EG +PLQTLRA
Sbjct: 120 ALQLENRMSYRRAMKSAMQRTMRAGAKGIKTSVSGRIGGADMARREFYSEGNIPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDYG A A+T YG G+K ++ + +
Sbjct: 180 DIDYGFAEADTTYGKVGVKTWIYNGEVLPTK 210
>gi|730657|sp|P41118|RS3_ACHSP RecName: Full=30S ribosomal protein S3
gi|456688|gb|AAB88907.1| ribosomal protein S3 [Acholeplasma palmae]
Length = 248
Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 102/240 (42%), Positives = 147/240 (61%), Gaps = 13/240 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ +W S+W+A + AL++ED IR+YL K+AGV++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRSWESKWYANEKDVPALINEDYNIRKYLNKVYKKAGVSQIEIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
++ +Y+A+PG++IG+ G K +L +T EI +V EV +PE A L+
Sbjct: 61 KGKAKDRIKVTLYTAKPGIVIGRDGETRNKAVSELEYLTKKEIVFNVVEVKRPEKVAELV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R FRR K A+Q A++ GA GVK + SGRL GAE++R+E Y EGRVPL
Sbjct: 121 AQNMAEQLENRASFRRVQKIAIQRALKSGAKGVKTLVSGRLGGAEMARSEGYSEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS---------DSTIPAAEHRVVEKDS 227
TLRA +DY TA A T YG GIKV+V + + +++ P + R ++ +
Sbjct: 181 TLRADVDYATAEAHTTYGVLGIKVWVFHGEVLPGQTILDTRKPFEASAPRPQRRNRKEAN 240
>gi|15805346|ref|NP_294040.1| 30S ribosomal protein S3 [Deinococcus radiodurans R1]
gi|27734542|sp|Q9RXJ6|RS3_DEIRA RecName: Full=30S ribosomal protein S3
gi|6457991|gb|AAF09898.1|AE001892_9 ribosomal protein S3 [Deinococcus radiodurans R1]
Length = 249
Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 109/215 (50%), Positives = 143/215 (66%), Gaps = 1/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KINP FRLGV WNSRW+A +Y +LL ED +IR+ + L AG+A+I IER
Sbjct: 1 MGNKINPNGFRLGVTKGWNSRWYAGKKQYASLLKEDEQIRQLINKKLAAAGIARIEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119
+ +I+ +A+PG++IGK G I+++R + + + + ++V E+P P I+A L+A
Sbjct: 61 GQQVNVIISAAKPGVVIGKGGESIKELRGDIERLVSAGTVAVNVAEIPNPNISAPLVALR 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA+Q+ERR FRRAMK+A Q M GA GVKVI SGRL GAE +RTE LEGRVPL TLR
Sbjct: 121 IAEQIERRFAFRRAMKQAAQRVMESGARGVKVILSGRLGGAEQARTEKVLEGRVPLHTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
A IDYGTA+A T YG GIKV V + + T
Sbjct: 181 ADIDYGTALARTTYGILGIKVLVFNGEVIGGKTET 215
>gi|224370685|ref|YP_002604849.1| RpsC [Desulfobacterium autotrophicum HRM2]
gi|259495242|sp|C0Q9W7|RS3_DESAH RecName: Full=30S ribosomal protein S3
gi|223693402|gb|ACN16685.1| RpsC [Desulfobacterium autotrophicum HRM2]
Length = 215
Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 108/216 (50%), Positives = 152/216 (70%), Gaps = 1/216 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RL + TW+SRW+A Y + ED K+R +L+ L AG++KI IER
Sbjct: 1 MGQKVNPIGLRLNIVKTWDSRWYAD-KNYADFVFEDYKLRAFLKKKLFHAGISKIEIERF 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K RI V++ARPG+IIGKKG++I ++K++ M E+ + + E+ +PEI+A L+A++I
Sbjct: 60 TKRIRIRVFAARPGIIIGKKGSEIALLKKEIEQMITPEVLIDIQEIRRPEIDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
+ QLERR+ FRRAMKR+V SAMRFGA G+K+I SGRL GAE++RTE Y EGR+PL TLRA
Sbjct: 120 SAQLERRIAFRRAMKRSVSSAMRFGAQGIKIICSGRLGGAEMARTEWYKEGRIPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
+DYG A+T YG+ GIK ++ + + +
Sbjct: 180 DVDYGFTEAKTTYGAIGIKTFIFKGEVLKADRNVKA 215
>gi|284040615|ref|YP_003390545.1| ribosomal protein S3 [Spirosoma linguale DSM 74]
gi|283819908|gb|ADB41746.1| ribosomal protein S3 [Spirosoma linguale DSM 74]
Length = 302
Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 104/218 (47%), Positives = 154/218 (70%), Gaps = 2/218 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP+ RLG+ W S W+ G E+ L ED KIR+Y+ + + +A+++IERT
Sbjct: 1 MGQKINPVGLRLGIVRGWESSWY-GGKEFSEKLVEDEKIRKYVAARIPKGAIARVVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + +++ARPG++IGK G +++KI+++L +T ++ +++ E+ +PEI+A L+ ++I
Sbjct: 60 LKRVTLTIHTARPGIVIGKGGGEVDKIKEELKKITGKDVQINIFEIKRPEIDAKLVGEAI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQL+ R+ FRRAMK+A+QSA+R GA G+KV SGRL GAE++R+E Y EGRVPL TLRA
Sbjct: 120 AQQLQARISFRRAMKQAIQSAIRVGAQGIKVKVSGRLGGAEIARSEQYKEGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
IDY + A+T YG GIKV++ + EV PAA
Sbjct: 180 DIDYAISEAQTVYGKIGIKVWIF-KGEVYGKRDLSPAA 216
>gi|224542244|ref|ZP_03682783.1| hypothetical protein CATMIT_01419 [Catenibacterium mitsuokai DSM
15897]
gi|224524786|gb|EEF93891.1| hypothetical protein CATMIT_01419 [Catenibacterium mitsuokai DSM
15897]
Length = 217
Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 101/214 (47%), Positives = 145/214 (67%), Gaps = 1/214 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FR+GVN W+SRW+A ++ L ED+KIRE+L LK+A VAKI IER+
Sbjct: 1 MGQKVSPVGFRVGVNREWSSRWYADKKDFANYLLEDVKIREFLMAKLKKAYVAKIDIERS 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN-MTNSEIHLSVNEVPKPEINATLIAQS 119
K I V+++RPG++IGK G I+ +RK+L +++ ++ ++V E+ + NA L+A
Sbjct: 61 KKRVNIFVHTSRPGVVIGKDGEAIDALRKELMGLISDKKVFINVVEIKNADTNAQLVADR 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA+QLE R FR KRA+Q+AMR GA G+K SGRL GA+++R+E Y EG VPL T+R
Sbjct: 121 IAEQLENRASFRTVQKRAIQNAMRNGAKGIKTSVSGRLGGADIARSEGYSEGVVPLHTIR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
A IDY TA A T YG G+KV++ + +
Sbjct: 181 ADIDYATAEAATTYGKLGVKVWICKGEILPAKKK 214
>gi|308178130|ref|YP_003917536.1| 30S ribosomal protein S3 [Arthrobacter arilaitensis Re117]
gi|307745593|emb|CBT76565.1| 30S ribosomal protein S3 [Arthrobacter arilaitensis Re117]
Length = 260
Score = 246 bits (627), Expect = 3e-63, Method: Composition-based stats.
Identities = 102/211 (48%), Positives = 144/211 (68%), Gaps = 4/211 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQKINP FRLG+ S WFA G Y + ED++IR L + +AG+A++
Sbjct: 1 MGQKINPNGFRLGITTDHVSHWFADSSKPGQRYADYVKEDVQIRALLSNGMDRAGIARVE 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV P++ A L+
Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTKKQVQLNILEVKNPDMEAMLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ IA+QL RV FRRAMK+A+QSAMR GA G++V SGRL GAE+SR E Y EGRVPL
Sbjct: 121 AQGIAEQLASRVAFRRAMKKAMQSAMRAGAKGIRVQCSGRLGGAEMSRKEFYREGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
TLRA+ID+G A+T +G G+KV++ D
Sbjct: 181 TLRANIDFGKFEAKTTFGRIGVKVWIYKGDV 211
>gi|224373643|ref|YP_002608015.1| 30S ribosomal protein S3 [Nautilia profundicola AmH]
gi|254764538|sp|B9L6M7|RS3_NAUPA RecName: Full=30S ribosomal protein S3
gi|223589411|gb|ACM93147.1| ribosomal protein S3 [Nautilia profundicola AmH]
Length = 240
Score = 246 bits (627), Expect = 3e-63, Method: Composition-based stats.
Identities = 105/223 (47%), Positives = 152/223 (68%), Gaps = 1/223 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+N W SRWF + + D ++R++L+ L AG++ I+IERT
Sbjct: 1 MGQKTNPIGLRLGINKNWRSRWFINYNTMPENVLGDYELRKFLKKKLYYAGISDIIIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN-MTNSEIHLSVNEVPKPEINATLIAQS 119
K RI +++A+PG+IIGK G++IE ++ +L + N E+ L++ E KP+++A L A++
Sbjct: 61 AKKIRITIFAAKPGIIIGKGGSEIEALKAELQKRIGNKELILNIKEERKPQLSAQLAAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
+A Q+ERRV FRRAMK+ +QSA++ GA G+KV +GRLNGAE++RTE YLEGRVPL TLR
Sbjct: 121 VATQIERRVAFRRAMKKVIQSALKSGAKGIKVQVAGRLNGAEMARTEWYLEGRVPLHTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
A IDYG A A T YG G+KV++ + + ++ A
Sbjct: 181 AKIDYGFAEALTTYGIIGVKVWIFKGEVLQRKMNSDDTATPER 223
>gi|149279658|ref|ZP_01885787.1| 30S ribosomal protein S3 [Pedobacter sp. BAL39]
gi|149229694|gb|EDM35084.1| 30S ribosomal protein S3 [Pedobacter sp. BAL39]
Length = 281
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 99/212 (46%), Positives = 147/212 (69%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +PI RLG+ W+S WF G+ Y L ED KIR+YL + + GVAK++IERT
Sbjct: 1 MGQKAHPIGNRLGIIKGWDSNWF-GGNNYADKLVEDEKIRKYLSARIAKGGVAKVVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + +++ARPG++IGK G +++KI+++L +T EI +++ E+ +PE++A L+A+ +
Sbjct: 60 LKRITVTIHTARPGIVIGKAGQEVDKIKEELKKLTKKEIQINIFEIKRPELDAQLVAEGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRAMK + + MR GA+G+K++ SGRL GAE++R+E Y EGR+PL T RA
Sbjct: 120 AKQLEARISFRRAMKSTIAATMRMGAEGIKIMTSGRLGGAEMARSEQYKEGRIPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
IDY A A T YG G+KV++ + D
Sbjct: 180 DIDYALAEALTTYGKIGVKVWICKGEVYGKRD 211
>gi|261367797|ref|ZP_05980680.1| ribosomal protein S3 [Subdoligranulum variabile DSM 15176]
gi|282570595|gb|EFB76130.1| ribosomal protein S3 [Subdoligranulum variabile DSM 15176]
Length = 234
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 100/234 (42%), Positives = 143/234 (61%), Gaps = 12/234 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+SRWF +G L ED KIR+ L+ L AGV KI IERT
Sbjct: 1 MGQKVNPHGMRVGVIKDWDSRWFTSKQAFGDTLVEDHKIRKTLKKQLYAAGVPKIEIERT 60
Query: 61 HK------NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINAT 114
++ V+ A+PG++IGK G + K+ K+L+ +T ++L++ EV NA
Sbjct: 61 VDSQTGAPRVKVNVFCAKPGIVIGKGGAESAKLEKQLAKLTGKAVNLNIIEVKGTTTNAQ 120
Query: 115 LIAQSIAQQLERRVVFRRAMKRAVQSAMRFGA------DGVKVIASGRLNGAELSRTECY 168
L+A+ +A QLERR+ FRRAMK+A+++AM+ G+KV SGRL GA+++RTE Y
Sbjct: 121 LVAEDVASQLERRIAFRRAMKQAIRNAMQPRDRSATPAKGIKVTCSGRLAGADIARTESY 180
Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
EG +PLQTLRA IDYG A A T YG G+KV++ + + + + +
Sbjct: 181 HEGTIPLQTLRADIDYGFAEANTTYGKVGVKVWIYKGEILKGAKAPAKKEGGKQ 234
>gi|88607248|ref|YP_504898.1| 30S ribosomal protein S3 [Anaplasma phagocytophilum HZ]
gi|123736446|sp|Q2GL53|RS3_ANAPZ RecName: Full=30S ribosomal protein S3
gi|88598311|gb|ABD43781.1| ribosomal protein S3 [Anaplasma phagocytophilum HZ]
Length = 211
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 107/206 (51%), Positives = 145/206 (70%), Gaps = 1/206 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RL + TW+S W+A +Y LHEDL +R +++ A V+K++I R
Sbjct: 1 MGQKSNPIGLRLKIVGTWDSLWYAN-RDYATKLHEDLLLRSFVKKTFHHAAVSKVVIARK 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I ++SARPG+IIGKKG DI++I++K++ M N E+ L + EV KP++ A LIA++I
Sbjct: 60 VDAVIINIHSARPGVIIGKKGVDIDRIKQKIAKMVNHEVELHIVEVKKPDLKAVLIAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+RV FRRAMKR VQ+ ++ GA GVKV +GRL GAE++RTE Y EG VPL T RA
Sbjct: 120 AQQLEKRVSFRRAMKRGVQNCLKMGAKGVKVSCAGRLGGAEIARTEWYKEGSVPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRD 206
+IDY A+T YG G+KV+V + D
Sbjct: 180 NIDYSCVEAKTIYGIVGVKVWVYVGD 205
>gi|291277262|ref|YP_003517034.1| 30S ribosomal protein S3 [Helicobacter mustelae 12198]
gi|290964456|emb|CBG40306.1| 30S ribosomal protein S3 [Helicobacter mustelae 12198]
Length = 233
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 112/231 (48%), Positives = 153/231 (66%), Gaps = 5/231 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N W SRWF A + ED KIR++L+ L AG+++I+IER
Sbjct: 1 MGQKVNPIGLRLGINRNWTSRWFPSTQSTPANIAEDYKIRKFLKKELYYAGISEIIIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ V +ARPGLIIGKKG DIE+++ L + + E +++ EV +P+ NA L A+++
Sbjct: 61 AKKIRVTVVAARPGLIIGKKGADIERVKDSLKAIIHKEATINIKEVKRPQANAQLAAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV FRRAMK+ +QSAM+ GA G+KV SGRL GAE++RTE Y+EGRVPL TLRA
Sbjct: 121 AIQLEKRVAFRRAMKKVMQSAMKSGAKGIKVKVSGRLAGAEMARTEWYMEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV-----SDSDSTIPAAEHRVVEKD 226
IDYG A A T YG G+KV++ + + S+ E + +
Sbjct: 181 KIDYGFAEAMTTYGIIGVKVWIFRGEVLQKGIQSEKKEDSQDREVKKNRRG 231
>gi|327383511|gb|AEA54987.1| 30S ribosomal protein S3 [Lactobacillus casei LC2W]
gi|327386704|gb|AEA58178.1| 30S ribosomal protein S3 [Lactobacillus casei BD-II]
Length = 220
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 96/214 (44%), Positives = 152/214 (71%), Gaps = 1/214 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FR+GV W+++W+A ++ A LHED++IR ++ L+ A V++I IER
Sbjct: 1 MGQKINPTGFRVGVIRDWDAKWYAD-KDFAAFLHEDIEIRNFINKKLQDASVSRIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I +++A+PG++IGK G+++E +RK+L+ +T ++H+++ E+ KP+++A L+ ++I
Sbjct: 60 AKRVNISIHTAKPGMVIGKGGSEVENLRKQLNKLTGRQVHINIVEIKKPDLDAKLVGENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE+R+ FRRAM++A+Q MR GA G+K ASGRLNGA+++R E Y EG VPL TLRA
Sbjct: 120 ARQLEQRIAFRRAMRQAMQRTMRAGAKGIKTQASGRLNGADIARREHYNEGLVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
I+Y A T YG GIK +++ + + +
Sbjct: 180 DIEYAWEEAATTYGRIGIKTWINRGEILPEKPKQ 213
>gi|163783273|ref|ZP_02178266.1| 50S ribosomal protein L2 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881381|gb|EDP74892.1| 50S ribosomal protein L2 [Hydrogenivirga sp. 128-5-R1-1]
Length = 231
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 104/226 (46%), Positives = 148/226 (65%), Gaps = 1/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +PI FRLGV +W+S+W+A EY LHEDLKI+ Y++ K AG+++I +ER
Sbjct: 1 MGQKTHPIGFRLGVTKSWDSKWYAPKKEYAQTLHEDLKIKRYIKDRYKVAGISRIDVERI 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT-NSEIHLSVNEVPKPEINATLIAQS 119
+I VY++RP +IIG+KG ++E ++K + M E+ ++V EV PE +A L+A+
Sbjct: 61 VDKLKIRVYASRPAIIIGRKGQEVELLKKTIEKMISGKEVTINVTEVRVPEADAQLVAED 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA Q+ERRV RRAMKRA+ +A++ GA GVK+ GR+ GAEL+R E +L GR+PLQTLR
Sbjct: 121 IALQIERRVSHRRAMKRAIDNALKAGAKGVKIQVKGRIGGAELARKEWFLVGRMPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
A IDYG A A T YG +KV++ D + + + K
Sbjct: 181 ADIDYGFATAYTKYGILSVKVWIYKGDILKGGKEEVLKKIEEDLAK 226
>gi|86610034|ref|YP_478796.1| 30S ribosomal protein S3 [Synechococcus sp. JA-2-3B'a(2-13)]
gi|123751651|sp|Q2JIM1|RS3_SYNJB RecName: Full=30S ribosomal protein S3
gi|86558576|gb|ABD03533.1| ribosomal protein S3 [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 256
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 97/227 (42%), Positives = 137/227 (60%), Gaps = 14/227 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRLGV SRWFA + Y ALL ED +IR YL L AG+A I IER
Sbjct: 1 MGQKIHPTGFRLGVIKEHRSRWFADPARYPALLQEDDQIRTYLTKQLSSAGLADIQIERK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------------TNSEIHLSVNEV 106
+ + +ARPG+++G+ G+ +E +R+ L I ++V EV
Sbjct: 61 ADQIDLEIRAARPGVVVGRGGSSLETLRQGLQKELSALAGQSPGSRGGGERTIRINVVEV 120
Query: 107 PKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTE 166
+ + ATL+A++IAQQLERR+ FRR +++ +Q A R G G+K+ +GRLNGAE++RTE
Sbjct: 121 TRADAEATLLAENIAQQLERRIAFRRIVRQVIQRAQRAGVQGIKIQIAGRLNGAEIARTE 180
Query: 167 CYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
EGR+PL TLRA IDY +A T +G G+KV+V + + +
Sbjct: 181 WTREGRIPLHTLRADIDYAEHLAHTTFGIIGVKVWVFKGEVLPGQER 227
>gi|188996233|ref|YP_001930484.1| ribosomal protein S3 [Sulfurihydrogenibium sp. YO3AOP1]
gi|226697766|sp|B2V7K7|RS3_SULSY RecName: Full=30S ribosomal protein S3
gi|188931300|gb|ACD65930.1| ribosomal protein S3 [Sulfurihydrogenibium sp. YO3AOP1]
Length = 227
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 99/216 (45%), Positives = 151/216 (69%), Gaps = 1/216 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG+ W S+W++ +Y LHED+KIR++++ KQAG++ +LIER
Sbjct: 1 MGQKVHPTGFRLGITQDWKSKWYSEKKKYTQTLHEDIKIRKFIEERYKQAGISSVLIERL 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119
R+ + +ARPG++IG KG ++EK+ + + +T+ E+ ++V+EV KPE++A L+A+
Sbjct: 61 GDRMRVKIMAARPGIVIGAKGAEVEKLNEIIKKLTSTKEVIVNVDEVKKPELDAKLVAED 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA QLERRV RRAMK+A+ SA++ GA G+K GR+ G +L+R E ++ GR+PLQTL+
Sbjct: 121 IALQLERRVTHRRAMKKAIDSALKAGAKGIKTQVGGRIGGVDLARKEWFMAGRMPLQTLK 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
A IDYGTA A T YG GIKV++ D++ +
Sbjct: 181 ADIDYGTARASTKYGILGIKVWIYKGDKLEGKAEEV 216
>gi|72382961|ref|YP_292316.1| 30S ribosomal protein S3 [Prochlorococcus marinus str. NATL2A]
gi|91207829|sp|Q46IR5|RS3_PROMT RecName: Full=30S ribosomal protein S3
gi|72002811|gb|AAZ58613.1| SSU ribosomal protein S3P [Prochlorococcus marinus str. NATL2A]
Length = 244
Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats.
Identities = 95/230 (41%), Positives = 140/230 (60%), Gaps = 3/230 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KI+P RLG+ S+W+A Y LL ED +IR +++ AG++ +LI R
Sbjct: 1 MGHKIHPTGIRLGITQEHRSKWYAPSKTYPLLLQEDDRIRTFIKKKYLAAGISDVLIARK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIA 117
+ + +ARPG+I+G++G+ IE++R +K N ++ ++V EV K + +A L+A
Sbjct: 61 ADQLEVELKTARPGVIVGRQGSGIEELRSGIQKTIGDRNRQVRINVVEVEKVDADAYLLA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ IAQQLE+RV FRR ++ AVQ A R G G+K+ GRLNGAE++R+E EGRVPL T
Sbjct: 121 EYIAQQLEKRVAFRRTIRMAVQRAQRAGVLGLKIQVGGRLNGAEIARSEWTREGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
LRA IDY T VA T YG GIKV+V + + + +P + +
Sbjct: 181 LRAEIDYATKVASTTYGVLGIKVWVFKGEVLPKEEQPLPVGSSPRRSRGN 230
>gi|116515253|ref|YP_802882.1| 30S ribosomal protein S3 [Buchnera aphidicola str. Cc (Cinara
cedri)]
gi|122285351|sp|Q057B0|RS3_BUCCC RecName: Full=30S ribosomal protein S3
gi|116257107|gb|ABJ90789.1| 30S ribosomal protein S3 [Buchnera aphidicola str. Cc (Cinara
cedri)]
Length = 235
Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats.
Identities = 103/222 (46%), Positives = 154/222 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ +WNS WFA E+ L D K+R Y++ L +A V+K++IER
Sbjct: 1 MGQKVHPNGMRLGIIKSWNSIWFASKKEFSNYLDSDFKVRSYVKKKLIKASVSKVIIERL 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
KN R+ +Y+ARPG++IGKKG D+EK+R +++ +T ++++E+ KPE++A L+A +I
Sbjct: 61 SKNIRVTIYTARPGIVIGKKGEDVEKLRIEIAKITGVPAQVNISEIRKPELDAKLVADNI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
+ QLERRV+FRRA+KR+VQ+AMR GA G+K+ SGRL G E++R E Y EGRVPL TLRA
Sbjct: 121 SSQLERRVMFRRAIKRSVQNAMRQGAKGIKIEVSGRLGGVEIARREWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
+I+Y T+ A T YG G+KV++ + + + +
Sbjct: 181 NIEYNTSEAHTTYGIIGVKVWIFKGEILDGMLVVSNKKDKKP 222
>gi|123966967|ref|YP_001012048.1| 30S ribosomal protein S3 [Prochlorococcus marinus str. MIT 9515]
gi|152060894|sp|A2BYT0|RS3_PROM5 RecName: Full=30S ribosomal protein S3
gi|123201333|gb|ABM72941.1| 30S ribosomal protein S3 [Prochlorococcus marinus str. MIT 9515]
Length = 244
Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats.
Identities = 94/220 (42%), Positives = 135/220 (61%), Gaps = 3/220 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KINP RLG+ S+WFA Y LL ED KIR ++Q AG++ +LI R
Sbjct: 1 MGNKINPTGLRLGITQEHRSKWFATSKTYPILLQEDYKIRNFIQKKYSSAGISDVLIARK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117
+ + +ARPG+I+G++G+ IE++R + ++ ++V EV + + +A L+A
Sbjct: 61 ADQLELELKTARPGVIVGRQGSGIEELRSGIQKTIGDRTRQVRINVVEVERVDADAYLLA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ IAQQLE+RV FRR ++ A+Q A R G G+K+ GRLNGAE++R+E EGRVPL T
Sbjct: 121 EYIAQQLEKRVAFRRTIRMALQRAQRAGVLGLKIQVGGRLNGAEIARSEWTREGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
LRA +DY A T YG GIKV+V + + + TIP
Sbjct: 181 LRAEVDYALREANTTYGVLGIKVWVFKGEVLPKEEQTIPV 220
>gi|312889361|ref|ZP_07748915.1| SSU ribosomal protein S3P [Mucilaginibacter paludis DSM 18603]
gi|311298238|gb|EFQ75353.1| SSU ribosomal protein S3P [Mucilaginibacter paludis DSM 18603]
Length = 308
Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats.
Identities = 97/212 (45%), Positives = 147/212 (69%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +PI RLG+ W+S WF G+ Y L ED KIR+Y+ + + GV+K++IERT
Sbjct: 1 MGQKAHPIGNRLGIIRGWDSNWF-GGNNYSDKLVEDEKIRKYISVRIAKGGVSKVVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + +++ARPG++IGK G +++KI+++L +T ++ +++ E+ +PE++A L+A+ I
Sbjct: 60 LKRITVTIHTARPGIVIGKGGQEVDKIKEELKKLTKKDVQINIFEIKRPELDAQLVAEGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRAMK + S MR GA+G+K++ SGRL GAE++R+E Y EGR+PL T RA
Sbjct: 120 AKQLEARISFRRAMKTTIASTMRMGAEGIKIMTSGRLGGAEMARSEQYKEGRIPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
IDY A A T YG G+KV++ + D
Sbjct: 180 DIDYALAEALTTYGKIGVKVWICKGEVYGKRD 211
>gi|126680610|gb|ABO26532.1| ribosomal protein S3 [Acholeplasma palmae]
Length = 240
Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats.
Identities = 102/239 (42%), Positives = 145/239 (60%), Gaps = 13/239 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ +W S+W+A + AL++ED IR+YL K+AGV++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRSWESKWYANEKDVPALINEDYNIRKYLNKVYKKAGVSQIEIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
++ +Y+A+PG++IG+ G K +L +T EI +V EV +PE A L+
Sbjct: 61 KGKAKDRIKVTLYTAKPGIVIGRDGETRNKAVSELEYLTKKEIVFNVVEVKRPEKVAELV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R FRR K A+Q A++ GA GVK + SGRL GAE++R+E Y EGRVPL
Sbjct: 121 AQNMAEQLENRASFRRVQKIAIQRALKSGAKGVKTLVSGRLGGAEMARSEGYSEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS---------DSTIPAAEHRVVEKD 226
TLRA +DY TA A T YG GIKV+V + + +++ P + R +
Sbjct: 181 TLRADVDYATAEAHTTYGVLGIKVWVFHGEVLPGQTILDTRKPFEASAPRPQRRNRKGG 239
>gi|237736176|ref|ZP_04566657.1| SSU ribosomal protein S3P [Fusobacterium mortiferum ATCC 9817]
gi|229421729|gb|EEO36776.1| SSU ribosomal protein S3P [Fusobacterium mortiferum ATCC 9817]
Length = 218
Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats.
Identities = 101/218 (46%), Positives = 147/218 (67%), Gaps = 1/218 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ +W+S W+A EY HED+KIREY++ + AG+AK+ IERT
Sbjct: 1 MGQKVDPRGLRLGITRSWDSNWYADKKEYAKYFHEDVKIREYVKKNYFHAGIAKVKIERT 60
Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
N ++VY+A+ G+IIG+KG +I+ +R L +T ++ + V EV + +A L+A++
Sbjct: 61 SPSNVVVLVYTAKAGIIIGRKGAEIDNLRVNLEKLTGKKVTVKVQEVKEFNKDAVLVAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA +E+RV ++RA+ +AV AMR GA G+KV+ SGRLNGAE++R E +EG+VPL TLR
Sbjct: 121 IATSIEKRVAYKRAVSQAVMRAMRAGAKGIKVMVSGRLNGAEIARAEWVVEGKVPLHTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
A IDY TA A T YG+ GIKV+V + + A
Sbjct: 181 ADIDYATATAHTTYGALGIKVWVFHGEVLPTKREGGEA 218
>gi|124026702|ref|YP_001015817.1| 30S ribosomal protein S3 [Prochlorococcus marinus str. NATL1A]
gi|152060892|sp|A2C4Z3|RS3_PROM1 RecName: Full=30S ribosomal protein S3
gi|123961770|gb|ABM76553.1| 30S ribosomal protein S3 [Prochlorococcus marinus str. NATL1A]
Length = 244
Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats.
Identities = 95/230 (41%), Positives = 140/230 (60%), Gaps = 3/230 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KI+P RLG+ S+W+A Y LL ED +IR +++ AG++ +LI R
Sbjct: 1 MGHKIHPTGIRLGITQEHRSKWYAPSKTYPLLLQEDDRIRTFIKKKYVAAGISDVLIARK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIA 117
+ + +ARPG+I+G++G+ IE++R +K N ++ ++V EV K + +A L+A
Sbjct: 61 ADQLEVELKTARPGVIVGRQGSGIEELRSGIQKTIGDRNRQVRINVVEVEKVDADAYLLA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ IAQQLE+RV FRR ++ AVQ A R G G+K+ GRLNGAE++R+E EGRVPL T
Sbjct: 121 EYIAQQLEKRVAFRRTIRMAVQRAQRAGVLGLKIQVGGRLNGAEIARSEWTREGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
LRA IDY T VA T YG GIKV+V + + + +P + +
Sbjct: 181 LRAEIDYATKVASTTYGVLGIKVWVFKGEVLPKEEQPLPVGSSPRRSRGN 230
>gi|159904213|ref|YP_001551557.1| 30S ribosomal protein S3 [Prochlorococcus marinus str. MIT 9211]
gi|226697746|sp|A9BCP1|RS3_PROM4 RecName: Full=30S ribosomal protein S3
gi|159889389|gb|ABX09603.1| 30S ribosomal protein S3 [Prochlorococcus marinus str. MIT 9211]
Length = 243
Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats.
Identities = 93/220 (42%), Positives = 135/220 (61%), Gaps = 3/220 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KI+P RLG+ SRW+A Y LL ED +IR ++Q AG++ +LI R
Sbjct: 1 MGHKIHPNGLRLGITQEHRSRWYASSKTYPTLLQEDDRIRGFIQKKYASAGISDVLIARK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117
+ + +ARPG+I+G++G+ IE++R + ++ ++V E+ + + +A L+A
Sbjct: 61 ADQLEVELKTARPGVIVGRQGSGIEELRSGIQKTIGDRSRQVRINVVEIERVDADAHLLA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ IAQQLE+RV FRR ++ AVQ A R G G+K+ GRLNGAE++R+E EGRVPL T
Sbjct: 121 EYIAQQLEKRVAFRRTIRMAVQRAQRAGVLGLKIQVGGRLNGAEIARSEWTREGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
LRA IDY A T YG GIKV+V + +S D +P
Sbjct: 181 LRAEIDYANKTANTTYGVLGIKVWVFKGEVLSKEDQPLPV 220
>gi|269122575|ref|YP_003310752.1| ribosomal protein S3 [Sebaldella termitidis ATCC 33386]
gi|268616453|gb|ACZ10821.1| ribosomal protein S3 [Sebaldella termitidis ATCC 33386]
Length = 218
Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats.
Identities = 99/218 (45%), Positives = 145/218 (66%), Gaps = 1/218 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ TW+S+WFA G EY HEDLKIRE+++ + AGV+ I IERT
Sbjct: 1 MGQKVDPRGIRLGITRTWDSKWFAEGKEYLNNFHEDLKIREFIKKNYYHAGVSCIQIERT 60
Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
II+ + + G++IG+KG +IE ++ K+ N+T ++ + V EV P N+ L+A+S
Sbjct: 61 SPTELTIIIDTGKAGILIGRKGAEIEALKGKIENLTGKKVQVKVQEVKNPNKNSQLVAES 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA +E+RV ++RA+ +A+Q A + G G+K+ SGRLNGAE++R+E L GRVPL TLR
Sbjct: 121 IATAIEKRVAYKRAVSQAIQRAEKSGVKGIKIAVSGRLNGAEIARSEWTLSGRVPLHTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
A +DY TA A T YG+ GIKV++ + + A
Sbjct: 181 ADVDYATATAFTTYGALGIKVWIFNGEVLPSKKEGGNA 218
>gi|46446052|ref|YP_007417.1| 30S ribosomal protein S3 [Candidatus Protochlamydia amoebophila
UWE25]
gi|61215577|sp|Q6ME57|RS3_PARUW RecName: Full=30S ribosomal protein S3
gi|46399693|emb|CAF23142.1| probable 30S ribosomal protein S3 [Candidatus Protochlamydia
amoebophila UWE25]
Length = 214
Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats.
Identities = 104/214 (48%), Positives = 143/214 (66%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI FRL W S+WFA E+G LL ED IR YL GV+ I I+R
Sbjct: 1 MGQKVNPISFRLVRTRDWRSKWFANKKEFGDLLVEDQIIRAYLLKKPALVGVSAIKIKRM 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ + +ARPGL+IGKKG +I+ ++ +LS +T E+ ++V EV +P+++A ++A SI
Sbjct: 61 SGKVEVTIVTARPGLVIGKKGAEIDVLKGELSKLTGKEVWVAVEEVKRPDMDAKIVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLERR+ FRRAMK+A+QS++ GA G+KV SGR+ GAE++RTE Y EG PL TLRA
Sbjct: 121 AKQLERRIPFRRAMKKAMQSSIDAGAFGIKVQLSGRIGGAEIARTEWYKEGSTPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
IDY T AET YGS G+KV++ ++
Sbjct: 181 DIDYATGRAETTYGSIGVKVWIYRGEDNLAKKEA 214
>gi|58384686|gb|AAW72701.1| 30S ribosomal protein S3 [Buchnera aphidicola (Cinara cedri)]
Length = 235
Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats.
Identities = 102/222 (45%), Positives = 154/222 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ +WNS WFA E+ L D K+R Y++ L +A V+K++IER
Sbjct: 1 MGQKVHPNGMRLGIIKSWNSIWFASKKEFSNYLDSDFKVRSYVKKKLIKASVSKVIIERL 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+N R+ +Y+ARPG++IGKKG D+EK+R +++ +T ++++E+ KPE++A L+A +I
Sbjct: 61 SQNIRVTIYTARPGIVIGKKGEDVEKLRIEIAKITGVPAQVNISEIRKPELDAKLVADNI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
+ QLERRV+FRRA+KR+VQ+AMR GA G+K+ SGRL G E++R E Y EGRVPL TLRA
Sbjct: 121 SSQLERRVMFRRAIKRSVQNAMRQGAKGIKIEVSGRLGGVEIARREWYREGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
+I+Y T+ A T YG G+KV++ + + + +
Sbjct: 181 NIEYNTSEAHTTYGIIGVKVWIFKGEILDGMLVVSNKKDKKP 222
>gi|7388208|sp|Q9ZI44|RS3_AQUPY RecName: Full=30S ribosomal protein S3
gi|4165871|gb|AAD08791.1| ribosomal protein S3 [Aquifex pyrophilus]
Length = 231
Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats.
Identities = 100/211 (47%), Positives = 142/211 (67%), Gaps = 1/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +PI FRLGV W S+W+ +Y LLHEDLKI+ Y++ K AGV+K+ IER
Sbjct: 1 MGQKTHPIGFRLGVIKDWPSKWYPPKKDYAKLLHEDLKIKNYIKKRYKVAGVSKVEIERI 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-TNSEIHLSVNEVPKPEINATLIAQS 119
RI +++A+P ++IG++G ++++++K + M EI +SV EV PE++A L+A+
Sbjct: 61 VDKVRIKIHTAKPAIVIGRRGQEVDRLKKTIERMLPGKEISISVLEVKVPELDAQLVAED 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA Q+ERRV RRAMKRA+ +A++ G GVKV GR+ GA +R E +L GR+PLQTLR
Sbjct: 121 IALQIERRVSHRRAMKRAIDNALKAGQKGVKVQVKGRIGGAARARKEWFLVGRMPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210
A IDYG A A T YG +KV++ D +
Sbjct: 181 ADIDYGFATAYTKYGILSVKVWIYKGDVLKG 211
>gi|289423637|ref|ZP_06425436.1| ribosomal protein S3 [Peptostreptococcus anaerobius 653-L]
gi|289155887|gb|EFD04553.1| ribosomal protein S3 [Peptostreptococcus anaerobius 653-L]
Length = 265
Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats.
Identities = 105/223 (47%), Positives = 149/223 (66%), Gaps = 1/223 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFA-RGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER 59
MGQK+NP R+GV W+SRWFA E+GA + ED +R++L+ L AG+AKI IER
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWFANDKKEFGAFIKEDNVLRKHLKKELYSAGLAKIEIER 60
Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
+ ++ ++ A+PG++IGK G IE ++K+L MT + L++ EV + +A L+A++
Sbjct: 61 SANKVKMDLHVAKPGVVIGKGGAGIEALKKELEKMTGKTVILNIIEVRNIDRDAQLVAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IAQ +ERR+ FRRAMK+AV M+ GA G+KV ASGRL GAE++RTE Y EG VPLQTLR
Sbjct: 121 IAQAIERRIAFRRAMKQAVGRTMKSGAKGIKVSASGRLGGAEMARTEGYSEGNVPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
+ I+YG A A T YG GIKV++ + + + + E R
Sbjct: 181 SDIEYGFAEANTTYGKIGIKVWICNGEILPGRNLSTEREEKRA 223
>gi|309789661|ref|ZP_07684242.1| ribosomal protein S3 [Oscillochloris trichoides DG6]
gi|308228397|gb|EFO82044.1| ribosomal protein S3 [Oscillochloris trichoides DG6]
Length = 242
Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats.
Identities = 102/235 (43%), Positives = 150/235 (63%), Gaps = 9/235 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG+K++PI FRLG W S+WFA Y LHEDL +R+ + L+ AGV++I IER+
Sbjct: 1 MGRKVHPIGFRLGYIKDWQSKWFAE-RTYTDQLHEDLALRKLIAKELQNAGVSRIEIERS 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ VY+A+PG++IGK+G +++ ++ L T +I L++ E+ +PE++A L+A+SI
Sbjct: 60 ANKVEVTVYTAKPGIVIGKRGANVDLLKNNLEQKTGKKIKLNIQEIHQPELDAQLVAESI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+ +RV ++RAMK+AVQ AMR GA GVKV SGRL GAE+SR + EGRVP TLRA
Sbjct: 120 AEQITKRVSYKRAMKQAVQRAMRLGALGVKVRCSGRLGGAEMSRIQNESEGRVPRHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD--------SDSTIPAAEHRVVEKDS 227
IDY A T YG G+KV++ + D ++ P+A E+ +
Sbjct: 180 DIDYAQVHAHTTYGRIGVKVWIYKGEVFPDQLAKAAVEQQASAPSAPSERRERPA 234
>gi|312130543|ref|YP_003997883.1| ssu ribosomal protein s3p [Leadbetterella byssophila DSM 17132]
gi|311907089|gb|ADQ17530.1| SSU ribosomal protein S3P [Leadbetterella byssophila DSM 17132]
Length = 262
Score = 244 bits (624), Expect = 6e-63, Method: Composition-based stats.
Identities = 97/212 (45%), Positives = 147/212 (69%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ RLG W S W+ G + L ED KIR+Y+ + + V++++IERT
Sbjct: 1 MGQKVNPVGLRLGYIRGWESNWY-GGKTFSEKLVEDDKIRKYINARIPKGSVSRVVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + +++ARPG++IGK G++++K+R++L +T ++ +++ E+ +PEI+A L+ ++I
Sbjct: 60 LKRITLTIHTARPGVVIGKAGSEVDKLREELKKLTKKDVQINIFEIKRPEIDAKLVGETI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQL R+ FRRAMK+A+QSAMR GA G+K+ SGRL GAE++R+E Y EGR+PL TLRA
Sbjct: 120 AQQLRARISFRRAMKQAIQSAMRVGAQGIKIKLSGRLGGAEMARSEQYKEGRIPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
IDY + A T YG GIKV++ + D
Sbjct: 180 DIDYAVSEALTVYGLIGIKVWIFKGEVYGKRD 211
>gi|171913919|ref|ZP_02929389.1| 30S ribosomal protein S3 [Verrucomicrobium spinosum DSM 4136]
Length = 272
Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats.
Identities = 100/211 (47%), Positives = 147/211 (69%), Gaps = 1/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI FRL V W S+W+A E+ LH DL IR YL+ L A +AKI+IER
Sbjct: 1 MGQKVHPIGFRLAVTKDWRSKWYAPEKEFADFLHADLAIRSYLKGKLSSAALAKIVIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119
R+ +++ARPGL+IG+KG +IE + ++S M ++ + + E+ +PE++A L+A++
Sbjct: 61 WNLVRVTLHTARPGLVIGRKGQEIEVMSVEISKMCGGKQVKIDIIEIKQPELDAQLVAET 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
+A QLERR+ FRRAMKRAVQ+AM GADG+++ +GRL GA+++R E Y +G+VPLQ+LR
Sbjct: 121 VATQLERRISFRRAMKRAVQTAMDMGADGIRIRCAGRLGGADIARAEQYRQGKVPLQSLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210
IDYG A T YG G+K +++ + EV
Sbjct: 181 IPIDYGFTEARTVYGIIGVKCWLNRKPEVEG 211
>gi|71276489|ref|ZP_00652764.1| ribosomal protein S3 [Xylella fastidiosa Dixon]
gi|71900600|ref|ZP_00682727.1| ribosomal protein S3 [Xylella fastidiosa Ann-1]
gi|170729706|ref|YP_001775139.1| 30S ribosomal protein S3 [Xylella fastidiosa M12]
gi|226697778|sp|B0U5K5|RS3_XYLFM RecName: Full=30S ribosomal protein S3
gi|71162666|gb|EAO12393.1| ribosomal protein S3 [Xylella fastidiosa Dixon]
gi|71729657|gb|EAO31761.1| ribosomal protein S3 [Xylella fastidiosa Ann-1]
gi|167964499|gb|ACA11509.1| 30S ribosomal protein S3 [Xylella fastidiosa M12]
Length = 239
Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats.
Identities = 108/208 (51%), Positives = 154/208 (74%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K++PI RLG++ WNS+W+A +E+ L DLK+R+ L+ + QAG++KILIER
Sbjct: 1 MGHKVHPIGIRLGISADWNSKWYANKAEFAGYLAADLKVRQVLRKKMSQAGISKILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ ++ ARPG++IGK+G DIE +RK+LS++ +H++V EV KPE++A L+A+S+
Sbjct: 61 SNAACVSMHVARPGVVIGKRGEDIEMLRKQLSDIMGVSVHINVIEVRKPELDAQLVAESV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERR++FRRAMKR+V +A+R GA G+K+ +GRLNGAE++R+E Y EGRVPLQTLRA
Sbjct: 121 AQQLERRIMFRRAMKRSVSNAIRLGALGIKISVAGRLNGAEIARSEWYREGRVPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
I YG + A T YG G+KV + D
Sbjct: 181 DIGYGFSEAHTNYGVTGVKVLIYHGDIF 208
>gi|260438210|ref|ZP_05792026.1| ribosomal protein S3 [Butyrivibrio crossotus DSM 2876]
gi|292809402|gb|EFF68607.1| ribosomal protein S3 [Butyrivibrio crossotus DSM 2876]
Length = 219
Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats.
Identities = 92/212 (43%), Positives = 142/212 (66%), Gaps = 2/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+S+W+A +++ L ED IR++++ L AG++KI IER
Sbjct: 1 MGQKVNPHGMRVGVIKDWDSKWYAE-ADFSDNLVEDYNIRKFVKKELYSAGISKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ +Y+A+PG++IGK G DIEK++ K+ +T ++ + + E+ +P+ +A L+A++I
Sbjct: 60 SDRVKVFIYTAKPGVVIGKGGADIEKLKAKIQKLTTKKVSIDIKEIKRPDGDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A QLE RV FRRAMK + M+ G G+K SGRL GA+++RTE Y EG +PLQTLR
Sbjct: 120 ALQLENRVSFRRAMKSVMSRTMKTAGVKGIKTSVSGRLGGADMARTEFYSEGTIPLQTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
A I+YG A A+T YG G+KV++ + +
Sbjct: 180 ADIEYGFAEADTTYGKVGVKVWIYKGEVLPTK 211
>gi|288818158|ref|YP_003432506.1| ribosomal protein S3 [Hydrogenobacter thermophilus TK-6]
gi|288787558|dbj|BAI69305.1| ribosomal protein S3 [Hydrogenobacter thermophilus TK-6]
gi|308751759|gb|ADO45242.1| ribosomal protein S3 [Hydrogenobacter thermophilus TK-6]
Length = 231
Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats.
Identities = 102/209 (48%), Positives = 151/209 (72%), Gaps = 1/209 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +PI FR+GV WNS+WFA +Y LLHED+ I++Y++ AGV+K++IER
Sbjct: 1 MGQKTHPIGFRIGVIKDWNSKWFASKRDYTKLLHEDINIKDYIKRRYASAGVSKVIIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-TNSEIHLSVNEVPKPEINATLIAQS 119
+ ++ + +ARPG+IIG+KG ++E+++K + ++ ++ ++V+EV PE++A L+A+
Sbjct: 61 AEKVKVRILAARPGIIIGRKGAEVEQLKKDIESIAVGKDVTITVDEVRVPELDAQLVAEE 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA Q+ERRV RRAMKRA+ +A + GA GVKV GR+ GAEL+R E +L GR+PLQTLR
Sbjct: 121 IALQIERRVSHRRAMKRAIDNAFKAGAKGVKVQVKGRIGGAELARAEWFLVGRMPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEV 208
A IDYG A A+T YG G+KV++ D +
Sbjct: 181 ADIDYGYATAQTKYGVLGVKVWIYKGDIL 209
>gi|311748508|ref|ZP_07722293.1| ribosomal protein S3 [Algoriphagus sp. PR1]
gi|126577024|gb|EAZ81272.1| ribosomal protein S3 [Algoriphagus sp. PR1]
Length = 243
Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats.
Identities = 99/212 (46%), Positives = 154/212 (72%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI FRLGV W+S W+ G ++ L+ED KIR+Y+ + + G+AK++IERT
Sbjct: 1 MGQKINPIGFRLGVVKGWDSNWY-GGKDFAEKLYEDQKIRKYVLARIPKGGIAKVIIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + +++ARPG++IGK G +++K++++L +T+ +I +++ E+ +PE++A L+ +SI
Sbjct: 60 LKRITLTIHTARPGVVIGKGGAEVDKLKEELKKLTSKDIQINIFEIKRPELDAKLVGESI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQL+ R+ FRRAMK+A+ ++MR GA+G+K+ SGRL GAE++R+E Y EGR+PL T+RA
Sbjct: 120 AQQLQARISFRRAMKQAIAASMRVGAEGIKIKLSGRLGGAEMARSEMYKEGRIPLHTMRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
IDY + A T YG GIKV++ + D
Sbjct: 180 DIDYALSEARTVYGIIGIKVWIFKGEVYGKRD 211
>gi|225574707|ref|ZP_03783317.1| hypothetical protein RUMHYD_02784 [Blautia hydrogenotrophica DSM
10507]
gi|225038072|gb|EEG48318.1| hypothetical protein RUMHYD_02784 [Blautia hydrogenotrophica DSM
10507]
Length = 219
Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats.
Identities = 100/212 (47%), Positives = 145/212 (68%), Gaps = 2/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+SRW+A ++ L ED IR++L+ L AGV+KI IER
Sbjct: 1 MGQKVNPHGLRVGVIKEWDSRWYAD-KDFADCLVEDYNIRKFLKKKLYTAGVSKIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE-IHLSVNEVPKPEINATLIAQS 119
+II+Y+A+PG++IGK G++IEK++K+L N T+ + I + + EV +P+ +A L+A++
Sbjct: 60 SDRVKIIIYTAKPGIVIGKGGSEIEKVKKELKNYTDKKFIIVDIKEVKRPDRDAQLVAEN 119
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA QLE R+ FRRAMK + M+ GA G+K SGRL GA+++RTE Y EG +PLQTLR
Sbjct: 120 IALQLENRISFRRAMKSTMSRTMKAGAQGIKTSVSGRLGGADMARTEFYSEGTIPLQTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
A IDYG A A+T YG G+K ++ + +
Sbjct: 180 ADIDYGFAEADTTYGKVGVKAWIYNGEVLPTK 211
>gi|256831833|ref|YP_003160560.1| 30S ribosomal protein S3 [Jonesia denitrificans DSM 20603]
gi|256685364|gb|ACV08257.1| ribosomal protein S3 [Jonesia denitrificans DSM 20603]
Length = 271
Score = 244 bits (623), Expect = 8e-63, Method: Composition-based stats.
Identities = 100/210 (47%), Positives = 144/210 (68%), Gaps = 4/210 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQK++P +RLG+ SRWFA G Y + ED+ IR+ + L++AG+AK+
Sbjct: 1 MGQKVHPHGYRLGITTDHRSRWFADSTKPGQRYRDYVREDVAIRKLMSEGLERAGIAKVE 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + ++IR +L +T ++ L++ EV EI A L+
Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRIRGELEKLTGKQVQLNILEVKNAEIEAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ IA+QL RV FRRAM++ +QSA+R GA G++V SGRL GAE+SR+E Y EGRVPL
Sbjct: 121 AQGIAEQLASRVSFRRAMRKGMQSALRAGAKGIRVQYSGRLGGAEMSRSEFYREGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
TLRA+IDYG A T +G G+KV++ D
Sbjct: 181 TLRANIDYGFFEARTTFGRIGVKVWIYKGD 210
>gi|291460724|ref|ZP_06600114.1| ribosomal protein S3 [Oribacterium sp. oral taxon 078 str. F0262]
gi|291416683|gb|EFE90402.1| ribosomal protein S3 [Oribacterium sp. oral taxon 078 str. F0262]
Length = 220
Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats.
Identities = 96/213 (45%), Positives = 140/213 (65%), Gaps = 1/213 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV WNS+W+A + +L ED +IR +L+ L A V++I IER
Sbjct: 1 MGQKVNPHGMRVGVIKDWNSKWYADKKSFSTILIEDHRIRSFLKKRLYSANVSRIDIERA 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
R+I+Y+A+PG +IGK G +IEK+RK + +T I++ + E+ +P+ +A L+A+S
Sbjct: 61 AEDKVRVIIYTAKPGFVIGKGGAEIEKLRKDVQKLTGKSIYIDIKEIKRPDRDAQLVAES 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IAQ LE R+ FRRA+K+A+ M+ GA G+K GRL GA+++R E Y EG +PLQTLR
Sbjct: 121 IAQSLENRISFRRALKQAMSRTMKSGALGIKAAVGGRLGGADIARREFYSEGTIPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
A IDYG A A T YG G+KV++ + +
Sbjct: 181 ADIDYGFAEAATTYGRLGVKVWIYKGEVLPAKK 213
>gi|219849881|ref|YP_002464314.1| 30S ribosomal protein S3 [Chloroflexus aggregans DSM 9485]
gi|254764521|sp|B8G6R9|RS3_CHLAD RecName: Full=30S ribosomal protein S3
gi|219544140|gb|ACL25878.1| ribosomal protein S3 [Chloroflexus aggregans DSM 9485]
Length = 241
Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats.
Identities = 103/229 (44%), Positives = 150/229 (65%), Gaps = 8/229 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG+K++PI FRLG W S+WFA G Y LHED+++R+ + L+ AGV++I IER+
Sbjct: 1 MGRKVHPIGFRLGYIKDWQSKWFAEGETYTKQLHEDIELRKLISKELQSAGVSRIEIERS 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I VY+A+PG++IGK+GT+++ ++ L T +I L++ E+ +PE++A L+A+SI
Sbjct: 61 ANKIEISVYTAKPGIVIGKRGTNVDTLKSALEKKTGKKIKLNIKEISQPELDAQLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
+Q+ +RV ++RAMK+AVQ AMR GA GVK+ SGRL GAE++R EGRVP TLRA
Sbjct: 121 GEQITKRVSYKRAMKQAVQRAMRLGAQGVKIRCSGRLAGAEMARVHEEAEGRVPRHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVS--------DSDSTIPAAEHR 221
IDY A T YG G+KV++ D + +T PA+E R
Sbjct: 181 DIDYAQVHAHTTYGRIGVKVWIYKGDVFPNQSAKASVEQPATAPASERR 229
>gi|163815981|ref|ZP_02207351.1| hypothetical protein COPEUT_02161 [Coprococcus eutactus ATCC 27759]
gi|158448791|gb|EDP25786.1| hypothetical protein COPEUT_02161 [Coprococcus eutactus ATCC 27759]
Length = 222
Score = 244 bits (622), Expect = 1e-62, Method: Composition-based stats.
Identities = 92/213 (43%), Positives = 141/213 (66%), Gaps = 2/213 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE--YGALLHEDLKIREYLQCHLKQAGVAKILIE 58
MGQK+NP R+G+ W+S W+A + L ED +R+YL+ L ++ ++KI IE
Sbjct: 1 MGQKVNPHGLRVGIIKDWDSNWYADKRNDEFAKNLAEDQILRKYLKTTLYKSNISKIEIE 60
Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118
R+ KN +I++Y+A+PG++IGK G IEKI+ +T+ ++ + V E+ +P+ +A L+A+
Sbjct: 61 RSAKNVKIVLYTAKPGVVIGKGGAGIEKIKADAQKLTDKKLFIDVKEIKRPDADAQLVAE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
+IA QLE R+ FR+AMK + M+ GA G+K SGRL GA+++RTE Y EG +PLQTL
Sbjct: 121 NIAAQLENRIAFRKAMKSCMGRTMKSGAQGIKCACSGRLGGADMARTEFYSEGTIPLQTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
RA IDYG A A+T YG G+K ++ + +
Sbjct: 181 RADIDYGFAEADTTYGKVGVKTWIYHGEVLPTK 213
>gi|289450090|ref|YP_003475778.1| 30S ribosomal protein S3 [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289184637|gb|ADC91062.1| ribosomal protein S3 [Clostridiales genomosp. BVAB3 str. UPII9-5]
Length = 222
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 94/218 (43%), Positives = 138/218 (63%), Gaps = 1/218 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FR+GV WN+RW+A ++ L +D IR++++ AGV+ I IER
Sbjct: 1 MGQKVNPNGFRVGVIRDWNTRWYADKKDFSRYLVQDNSIRKFVKKECYVAGVSSIEIERK 60
Query: 61 HK-NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
I +++A+PG+IIG KG IE ++KKL ++V EV + +A L+A++
Sbjct: 61 GDDRTEITIHTAKPGIIIGAKGAGIEALKKKLLAEFGINFFINVLEVKGVDTDAQLVAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA QLE+R+ FRRAMK+A+ AM+ GA G+K SGR+ GAE++RTE Y +G +PLQTLR
Sbjct: 121 IAAQLEKRISFRRAMKQAMGRAMKTGAKGIKTQVSGRIGGAEIARTEHYHDGTIPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
A I YG A A+T YG G+KV++ + ++
Sbjct: 181 ADIKYGFAEADTTYGRLGVKVWIYKGEVLAAKKQETKK 218
>gi|83816111|ref|YP_445173.1| 30S ribosomal protein S3 [Salinibacter ruber DSM 13855]
gi|294507057|ref|YP_003571115.1| 30S ribosomal protein S3 [Salinibacter ruber M8]
gi|123739751|sp|Q2S3Q8|RS3_SALRD RecName: Full=30S ribosomal protein S3
gi|83757505|gb|ABC45618.1| ribosomal protein S3 [Salinibacter ruber DSM 13855]
gi|294343385|emb|CBH24163.1| 30S ribosomal protein S3 [Salinibacter ruber M8]
Length = 236
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 98/227 (43%), Positives = 160/227 (70%), Gaps = 2/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +PI FRLG W+S W++ + L ED ++R YL LK+AG+++ +IERT
Sbjct: 1 MGQKTHPIGFRLGAIRGWDSNWYSET-NFQDKLVEDEELRRYLHTRLKRAGLSRAVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ + ++++RPG++IG+ G+++EK++ +L +T +I ++++E+ +PE++ATL+A++I
Sbjct: 60 PERVILTLHTSRPGVVIGRGGSEVEKLKGELETLTGKDIQINISEIKRPELDATLVAKNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLE R+ FRRAMK+A+Q+AMR GA+GV++ A+GRL GAE+ RTE Y+EGRVPL T+RA
Sbjct: 120 VQQLEGRISFRRAMKQAMQAAMRMGAEGVRIRAAGRLGGAEMGRTEEYMEGRVPLHTIRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVS-DSDSTIPAAEHRVVEKD 226
ID+ A T YG+ G+KV++ + + S A+ R +++
Sbjct: 180 DIDFAQETALTIYGTIGVKVWIHRGEILGKPDLSPNVQAQQRKMKES 226
>gi|253581386|ref|ZP_04858612.1| ribosomal protein S3 [Fusobacterium varium ATCC 27725]
gi|251836750|gb|EES65284.1| ribosomal protein S3 [Fusobacterium varium ATCC 27725]
Length = 218
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 97/218 (44%), Positives = 145/218 (66%), Gaps = 1/218 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ +W+S W+A EY HED+KIRE ++ + AG++K+ IERT
Sbjct: 1 MGQKVDPRGLRLGITRSWDSNWYADKKEYAKYFHEDVKIRELIKKNYFHAGISKVKIERT 60
Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
N ++VY+A+ G+IIG+KG +I+ +R L +T ++ + V EV + +A L+A++
Sbjct: 61 SPSNVVVLVYTAKAGIIIGRKGAEIDNLRVLLEKLTGKKVTVKVQEVKEFNKDAVLVAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA +E+RV ++RA+ +A+ AMR GA G+KV+ SGRLNGAE++R E +EG+VPL TLR
Sbjct: 121 IATSIEKRVAYKRAVSQAIMRAMRAGAKGIKVMVSGRLNGAEIARAEWVVEGKVPLHTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
A IDY A A T YG+ GIKV+V + + A
Sbjct: 181 ADIDYAVATAHTTYGALGIKVWVFHGEVLPTKREGGEA 218
>gi|15837760|ref|NP_298448.1| 30S ribosomal protein S3 [Xylella fastidiosa 9a5c]
gi|27734539|sp|Q9PE70|RS3_XYLFA RecName: Full=30S ribosomal protein S3
gi|9106122|gb|AAF83968.1|AE003950_18 30S ribosomal protein S3 [Xylella fastidiosa 9a5c]
Length = 239
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 108/208 (51%), Positives = 154/208 (74%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K++PI RLG++ WNS+W+A +E+ L DLK+R+ L+ + QAG++KILIER
Sbjct: 1 MGHKVHPIGIRLGISADWNSKWYANKAEFAGYLAADLKVRQVLRKKMSQAGISKILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ ++ ARPG++IGK+G DIE +RK++S++ +H++V EV KPE++A L+A+S+
Sbjct: 61 SNTACVSMHVARPGVVIGKRGEDIEMLRKQVSDIMGVSVHINVIEVRKPELDAQLVAESV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERR++FRRAMKR+V +AMR GA G+K+ +GRLNGAE++R+E Y EGRVPLQTLRA
Sbjct: 121 AQQLERRIMFRRAMKRSVGNAMRLGALGIKISVAGRLNGAEIARSEWYREGRVPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
I YG + A T YG G+KV + D
Sbjct: 181 DIGYGFSEAHTNYGVTGVKVLIYHGDIF 208
>gi|33241155|ref|NP_876097.1| 30S ribosomal protein S3 [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
gi|61215704|sp|Q7V9W8|RS3_PROMA RecName: Full=30S ribosomal protein S3
gi|33238685|gb|AAQ00750.1| Ribosomal protein S3 [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
Length = 243
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 94/230 (40%), Positives = 139/230 (60%), Gaps = 5/230 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KI+P RLG+ SRW+A Y LL ED +IR ++Q AG++ +LI R
Sbjct: 1 MGHKIHPNGLRLGITQEHRSRWYASSKTYPLLLQEDDRIRVFIQKKYGAAGISDVLIARK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117
+ + +ARPG+I+G++G+ IE++R + ++ ++V E+ + + +A L+A
Sbjct: 61 ADQLEVELKTARPGVIVGRQGSGIEELRSGIQKTIGDRSRQVRINVVEIERVDADAHLLA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ IAQQLE+RV FRR ++ AVQ A R G G+K+ GRLNGAE++R+E EGRVPL T
Sbjct: 121 EYIAQQLEKRVAFRRTIRMAVQRAQRAGVLGLKIQVGGRLNGAEIARSEWTREGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP--AAEHRVVEK 225
LRA IDY A T YG GIKV+V + +S + +P A+ R +
Sbjct: 181 LRAEIDYANKTANTTYGVLGIKVWVFKGEVLSKEEQPLPVGASPRRKGNR 230
>gi|124024001|ref|YP_001018308.1| 30S ribosomal protein S3 [Prochlorococcus marinus str. MIT 9303]
gi|152060893|sp|A2CC33|RS3_PROM3 RecName: Full=30S ribosomal protein S3
gi|123964287|gb|ABM79043.1| 30S ribosomal protein S3 [Prochlorococcus marinus str. MIT 9303]
Length = 242
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 95/230 (41%), Positives = 141/230 (61%), Gaps = 5/230 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KI+P RLG+ SRW+A Y LL ED +IR ++ AG++ +LI R
Sbjct: 1 MGNKIHPTGLRLGITQEHRSRWYATSKMYPILLQEDDRIRRFIHKKYGAAGISDVLIARK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIA 117
+ + +ARPG+++G++G+ IE++R +K + ++ ++V EV + + +A L+A
Sbjct: 61 ADQLEVELKTARPGVLVGRQGSGIEELRTGIQKTIGDHSRQVRINVVEVERVDADAFLLA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ IAQQLE+RV FRR ++ AVQ A R G G+K+ GRLNGAE++R E EGRVPL T
Sbjct: 121 EYIAQQLEKRVAFRRTIRMAVQRAQRAGVLGLKIQVGGRLNGAEIARNEWTREGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP--AAEHRVVEK 225
LRA IDY T VA T YG GIKV++ + + D ++P A+ R +
Sbjct: 181 LRAEIDYATKVASTTYGVLGIKVWIFKGEVLGDEAQSMPVGASPRRRGNR 230
>gi|255348899|ref|ZP_05380906.1| 30S ribosomal protein S3 [Chlamydia trachomatis 70]
gi|255503439|ref|ZP_05381829.1| 30S ribosomal protein S3 [Chlamydia trachomatis 70s]
gi|255507118|ref|ZP_05382757.1| 30S ribosomal protein S3 [Chlamydia trachomatis D(s)2923]
gi|289525567|emb|CBJ15045.1| SSU ribosomal protein S3P [Chlamydia trachomatis Sweden2]
gi|296435127|gb|ADH17305.1| 30S ribosomal protein S3 [Chlamydia trachomatis E/150]
gi|296438847|gb|ADH21000.1| 30S ribosomal protein S3 [Chlamydia trachomatis E/11023]
Length = 219
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 102/208 (49%), Positives = 141/208 (67%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK P+ FR V W S W+ E+G L ED+KIRE+L+ G A +++R
Sbjct: 1 MGQKGCPVGFRTAVTKKWRSLWYGNNQEFGKFLIEDVKIREFLKKKPSCQGAAGFVVKRM 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++ARPGL+IGKKG ++E ++ +L +T ++ + + EV +PE+NA L+A I
Sbjct: 61 SGKIEVTIHTARPGLVIGKKGAEVESLKAELKKLTGKDVWVEIAEVKRPELNAQLVADGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+ERRV FRRAMK+A+QS M GA GVKV SGRL GAE++R+E Y GRVPL TLRA
Sbjct: 121 AKQIERRVSFRRAMKKALQSVMDAGALGVKVQVSGRLAGAEIARSEWYKNGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
IDY TA AET YG GIKV+++L ++
Sbjct: 181 DIDYATASAETTYGIIGIKVWINLGEKK 208
>gi|182412045|ref|YP_001817111.1| ribosomal protein S3 [Opitutus terrae PB90-1]
gi|226697739|sp|B1ZNE2|RS3_OPITP RecName: Full=30S ribosomal protein S3
gi|177839259|gb|ACB73511.1| ribosomal protein S3 [Opitutus terrae PB90-1]
Length = 210
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 105/206 (50%), Positives = 144/206 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP FRL V W SRW+A ++ LL ED IRE L LKQA V +I IER
Sbjct: 1 MGQKTNPTGFRLAVRRNWQSRWYATKKDFPKLLEEDQIIREKLMEKLKQASVPRIFIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +Y+ARPG++IG+KG +IEKI+++L+ +T EI L + EV KPEI A L+A+++
Sbjct: 61 SNRVRVKIYTARPGIVIGRKGQEIEKIKEELAKLTGKEILLDIQEVKKPEIEAQLVAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR+ FRRAMK+AV+ AM GA+G+++ SGRL GA+++R E +GRVPL TLR
Sbjct: 121 ALQLERRIAFRRAMKKAVEMAMTLGAEGIRIQCSGRLGGADIARREWQRKGRVPLHTLRE 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRD 206
+IDYG + A T YG G+K ++ ++
Sbjct: 181 NIDYGFSEAHTVYGKIGVKCWICKKE 206
>gi|257470832|ref|ZP_05634922.1| SSU ribosomal protein S3P [Fusobacterium ulcerans ATCC 49185]
gi|317065036|ref|ZP_07929521.1| SSU ribosomal protein S3P [Fusobacterium ulcerans ATCC 49185]
gi|313690712|gb|EFS27547.1| SSU ribosomal protein S3P [Fusobacterium ulcerans ATCC 49185]
Length = 218
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 97/218 (44%), Positives = 145/218 (66%), Gaps = 1/218 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ +W+S W+A EY HED+KIRE ++ + AG++K+ IERT
Sbjct: 1 MGQKVDPRGLRLGITRSWDSNWYADKKEYAKYFHEDVKIRELIKKNYFHAGISKVKIERT 60
Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
N ++VY+A+ G+IIG+KG +I+ +R L +T ++ + V EV + +A L+A++
Sbjct: 61 SPSNVVVLVYTAKAGIIIGRKGAEIDNLRVSLEKLTGKKVTVKVQEVKEFNKDAVLVAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA +E+RV ++RA+ +A+ AMR GA G+KV+ SGRLNGAE++R E +EG+VPL TLR
Sbjct: 121 IATSIEKRVAYKRAVSQAIMRAMRAGAKGIKVMVSGRLNGAEIARAEWVVEGKVPLHTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
A IDY A A T YG+ GIKV+V + + A
Sbjct: 181 ADIDYAVATAHTTYGALGIKVWVFHGEVLPTKREGGEA 218
>gi|326692231|ref|ZP_08229236.1| 30S ribosomal protein S3 [Leuconostoc argentinum KCTC 3773]
Length = 223
Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats.
Identities = 101/223 (45%), Positives = 152/223 (68%), Gaps = 8/223 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FR+GV W+++WFA ++Y LHEDL+IR+Y++ +L A V ++ IER+
Sbjct: 1 MGQKINPTGFRVGVIRDWDAKWFADKADYANQLHEDLRIRKYIEKNLADAAVDRVEIERS 60
Query: 61 HK-NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-------SEIHLSVNEVPKPEIN 112
K + +++A+PG++IGK G+++EK+R +L+ +T+ + +++ E+ KP+++
Sbjct: 61 TKSRVDVSIHTAKPGMVIGKGGSEVEKLRTQLAKLTDVDEKGRSKRVFINIVEIKKPDLS 120
Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172
A L+ Q IA LERRV FRRAM+ A+Q A R GA G+KV+ SGRLNGA+++R E Y EG
Sbjct: 121 AHLVGQQIAGDLERRVAFRRAMRGAIQRATRSGAKGIKVMVSGRLNGADIARVEQYTEGT 180
Query: 173 VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
VPL TLRA IDY A TAYG+ GIK ++ D + ++
Sbjct: 181 VPLHTLRADIDYSWDEAMTAYGNLGIKTWIYRGDVLPQKKNSK 223
>gi|158520731|ref|YP_001528601.1| ribosomal protein S3 [Desulfococcus oleovorans Hxd3]
gi|226697698|sp|A8ZV63|RS3_DESOH RecName: Full=30S ribosomal protein S3
gi|158509557|gb|ABW66524.1| ribosomal protein S3 [Desulfococcus oleovorans Hxd3]
Length = 216
Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats.
Identities = 105/216 (48%), Positives = 147/216 (68%), Gaps = 3/216 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP RLG+ TW SRW+A EY + ED K+RE+++ L AG+AK+ IER+
Sbjct: 1 MGQKVNPEGLRLGIVKTWQSRWYAD-KEYADFILEDFKLREFVKKKLHHAGIAKVEIERS 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN--MTNSEIHLSVNEVPKPEINATLIAQ 118
R+ +++ARPG++IGKKG +IE+++ ++ + ++ + + EV KPE A L+A+
Sbjct: 60 LNRIRLRIFAARPGIVIGKKGNEIEQLKNEIRQKVVAGKDLAIDIQEVKKPETVAQLVAE 119
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
++A QLERRV FRRAMKR V SAMRFG G+K+I SGRL GAE++R E Y EGRVPL TL
Sbjct: 120 NVAGQLERRVAFRRAMKRGVSSAMRFGVKGIKIICSGRLGGAEMARREWYREGRVPLHTL 179
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
RA +DYG A T YG G+KV++ + + D
Sbjct: 180 RADVDYGFVEASTTYGRIGVKVFIFKGEVLKDERKK 215
>gi|196228462|ref|ZP_03127329.1| ribosomal protein S3 [Chthoniobacter flavus Ellin428]
gi|196227865|gb|EDY22368.1| ribosomal protein S3 [Chthoniobacter flavus Ellin428]
Length = 251
Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats.
Identities = 100/223 (44%), Positives = 151/223 (67%), Gaps = 4/223 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI +RL VN W SRW+A E L+ DLKIR Y++ L+ A V+KI+IER
Sbjct: 1 MGQKVNPIGYRLAVNRDWRSRWYASPKELPDFLNSDLKIRRYVKDKLRLAAVSKIVIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119
+ R+ +++ARPG++IG+KGT+IE + K++ ++N + + + E+ PE++A L+A++
Sbjct: 61 WNSIRVTIFTARPGIVIGRKGTEIENMTKEIERLSNGKSVKIDIQEIKTPELDAQLVAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
+A Q+ERR+ FRRAMK+++Q M FGA G+K+ +GRL GAE+SR E Y EG++PL TLR
Sbjct: 121 VALQIERRISFRRAMKKSIQQTMEFGAQGIKLRCAGRLGGAEISRAEWYREGKIPLHTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
IDYG A A T YG G+K ++ + ++ PA +
Sbjct: 181 QPIDYGFAEANTVYGKIGVKCWLCKPE---GANEPQPADKEEK 220
>gi|282878765|ref|ZP_06287533.1| ribosomal protein S3 [Prevotella buccalis ATCC 35310]
gi|281299156|gb|EFA91557.1| ribosomal protein S3 [Prevotella buccalis ATCC 35310]
Length = 243
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 102/221 (46%), Positives = 150/221 (67%), Gaps = 1/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ W+S WF G ++G L ED KIR+YL L +A +++I+IERT
Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWF-GGKDFGDNLVEDRKIRKYLNERLAKASLSRIIIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I + +ARPG++IGK G D++K++++L N+ N EI +++ EV KPE++A ++A +I
Sbjct: 60 LKLVTITICTARPGIVIGKGGQDVDKLKEELKNLFNKEIQINIFEVKKPELDANIVANNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E ++ +RRA+K A+Q+ MR GA+G+KV SGRLNGAE++R E Y EGR PL T RA
Sbjct: 120 ARQVEGKIAYRRAIKMAIQNTMRAGAEGIKVQISGRLNGAEMARKEMYKEGRTPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
IDY A T G GIKV++ + + T + +
Sbjct: 180 DIDYCQTEALTKVGLLGIKVWICRGEVYGKQELTPNFTQDK 220
>gi|218779756|ref|YP_002431074.1| ribosomal protein S3 [Desulfatibacillum alkenivorans AK-01]
gi|226697696|sp|B8FES9|RS3_DESAA RecName: Full=30S ribosomal protein S3
gi|218761140|gb|ACL03606.1| ribosomal protein S3 [Desulfatibacillum alkenivorans AK-01]
Length = 219
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 113/219 (51%), Positives = 164/219 (74%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ TW+SRW+A +Y + ED K+R++L+ L AG++KI IER+
Sbjct: 1 MGQKVNPIGLRLGIVKTWDSRWYAEKGKYAEFIREDFKLRKFLKKKLHHAGISKIEIERS 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ R+ V++ARPG++IGKKG++IE+++K+L M ++E+ + + EV KPE++A L+A+++
Sbjct: 61 GRRVRLRVFAARPGIVIGKKGSEIEQLKKELEKMVDNEVLIDIQEVRKPELDAQLVAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV FRRAMKR + SAMRFGA GVK++A+GRL GAE++R E Y EGR+PL TLRA
Sbjct: 121 AMQLERRVAFRRAMKRGISSAMRFGAQGVKIMAAGRLGGAEMARREWYREGRMPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV-SDSDSTIPAA 218
IDYG A T YG G+KV++ + + SD+++ P A
Sbjct: 181 DIDYGYTEANTTYGVIGVKVFIFKGEILKSDTEAANPTA 219
>gi|89898714|ref|YP_515824.1| 30S ribosomal protein S3 [Chlamydophila felis Fe/C-56]
gi|123735902|sp|Q252V9|RS3_CHLFF RecName: Full=30S ribosomal protein S3
gi|89332086|dbj|BAE81679.1| 30S ribosomal protein S3 [Chlamydophila felis Fe/C-56]
Length = 223
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 101/207 (48%), Positives = 142/207 (68%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK PI FR GV W S W+ E+G L ED+KIRE+L+ G A ++ R
Sbjct: 1 MGQKGCPIGFRTGVTKKWRSLWYGNKQEFGKFLIEDVKIREHLRKKPSCQGAAGFVVRRM 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ + +ARPGL+IGKKG +++ ++++L +T E+ + + E+ +PE+NA L+A +I
Sbjct: 61 SGKIEVTIQTARPGLVIGKKGAEVDLLKEELRKLTGKEVWVEIAEIKRPELNAKLVADNI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+ERRV FRRAMK+A+QS M GA GVK+ SGRL GAE++R+E Y GRVPL TLRA
Sbjct: 121 ARQIERRVSFRRAMKKAMQSVMEAGAIGVKIQVSGRLAGAEIARSEWYKNGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207
IDY TA AET YG G+KV+++L ++
Sbjct: 181 DIDYATASAETTYGIIGVKVWINLGEK 207
>gi|325280962|ref|YP_004253504.1| ribosomal protein S3 [Odoribacter splanchnicus DSM 20712]
gi|324312771|gb|ADY33324.1| ribosomal protein S3 [Odoribacter splanchnicus DSM 20712]
Length = 244
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 105/218 (48%), Positives = 151/218 (69%), Gaps = 2/218 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ W+S WF G YG L ED KIR+YL L +AG+AKI+IERT
Sbjct: 1 MGQKCNPISNRLGIIRGWDSNWF-GGKNYGDKLVEDYKIRKYLNARLAKAGIAKIVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I + +ARPG+IIGK G +++K++++L +T+ E+ +++ E+ +PE++A ++ +I
Sbjct: 60 LKLITITINTARPGIIIGKGGQEVDKLKEELKKITDKEVQINIFEIKRPELDAVIVGNNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV +RRA+K A+ S MR GA+G+K++ SGRLNGAE++R E + EGR PL T RA
Sbjct: 120 ARQLEGRVAYRRAIKMAIASTMRMGAEGIKILISGRLNGAEMARAEMFKEGRTPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
ID+ A A T YG GIKV++ + EV +P +
Sbjct: 180 DIDFAQAEALTTYGLLGIKVWIC-KGEVYGKRELVPNS 216
>gi|237802951|ref|YP_002888145.1| 30S ribosomal protein S3 [Chlamydia trachomatis B/Jali20/OT]
gi|231274185|emb|CAX10979.1| SSU ribosomal protein S3P [Chlamydia trachomatis B/Jali20/OT]
Length = 224
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 102/208 (49%), Positives = 141/208 (67%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK PI FR + W S W+ E+G L ED+KIRE+L+ G A +++R
Sbjct: 1 MGQKGCPIGFRTAITKKWRSLWYGNNQEFGKFLVEDVKIREFLKKKPSCQGAAGFVVKRM 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++ARPGL+IGKKG ++E ++ +L +T ++ + + EV +PE+NA L+A I
Sbjct: 61 SGKIEVTIHTARPGLVIGKKGAEVESLKAELKKLTGKDVWVEIAEVKRPELNAQLVADGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+ERRV FRRAMK+A+QS M GA GVKV SGRL GAE++R+E Y GRVPL TLRA
Sbjct: 121 AKQIERRVSFRRAMKKALQSVMDAGALGVKVQVSGRLAGAEIARSEWYKNGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
IDY TA AET YG GIKV+++L ++
Sbjct: 181 DIDYATASAETTYGIIGIKVWINLGEKK 208
>gi|269837072|ref|YP_003319300.1| 30S ribosomal protein S3 [Sphaerobacter thermophilus DSM 20745]
gi|269786335|gb|ACZ38478.1| ribosomal protein S3 [Sphaerobacter thermophilus DSM 20745]
Length = 224
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 98/219 (44%), Positives = 143/219 (65%), Gaps = 1/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG+K++PI FRLG+ W S+W+A Y LHEDL IR + L +AG+++I IER
Sbjct: 1 MGRKVHPIGFRLGIVHDWESKWYAE-RNYTEQLHEDLTIRRLINAELTRAGISRIEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++++PG++IGK+G ++E+IR+ + ++HL + E+ PE++A LIA+SI
Sbjct: 60 ANRIEVTIHTSKPGIVIGKQGANVERIRQLIEQQVGKKVHLKIEEIKDPELDARLIAESI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+ RRV FRRAMK A AMR GA GVK+ SGRL GAE++RT + GRVPL T+RA
Sbjct: 120 AEQISRRVSFRRAMKHAATQAMRKGAKGVKIRLSGRLGGAEMARTVTEMMGRVPLHTIRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
ID+ A T YG G+KV+V D + ++ S E
Sbjct: 180 DIDFAVVHAHTTYGRIGVKVWVYRGDVMPEARSGAELPE 218
>gi|297567278|ref|YP_003686250.1| 30S ribosomal protein S3 [Meiothermus silvanus DSM 9946]
gi|296851727|gb|ADH64742.1| ribosomal protein S3 [Meiothermus silvanus DSM 9946]
Length = 250
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 99/210 (47%), Positives = 141/210 (67%), Gaps = 1/210 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KINP+ RLG+ W SRW+A +Y LL +D +IR ++ L AG+A+I IER
Sbjct: 1 MGNKINPVGLRLGITREWESRWYAGKKDYSKLLIQDRQIRSLIEKELAPAGLARIDIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRK-KLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
N + VY+A+PG++IG+ G I+++R+ + + L+V EV P ++A L+AQ
Sbjct: 61 ADNVAVTVYAAKPGVVIGRGGETIKRLRETLQNKFPGKTVALNVQEVGNPNLSAPLVAQR 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
+A+Q+ERR RRA+K+AVQ GA G K++ SGR+ GAE +RTE EGRVPL TLR
Sbjct: 121 VAEQIERRFAVRRAIKQAVQRIRESGALGAKIVVSGRIGGAEQARTEWAAEGRVPLHTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVS 209
A++DYGTA AET YGS G+KVYV + +++
Sbjct: 181 ANLDYGTARAETTYGSLGVKVYVFMGEQIG 210
>gi|282891944|ref|ZP_06300423.1| hypothetical protein pah_c200o108 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498204|gb|EFB40544.1| hypothetical protein pah_c200o108 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 216
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 99/216 (45%), Positives = 137/216 (63%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RL N + S+WFA E+G + ED IREYL G ++I I R
Sbjct: 1 MGQKANPIGLRLIRNRKFRSKWFANKHEFGQNVIEDHMIREYLMKKPACVGTSQIRICRM 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + +ARPGL+IGKKG +I+ ++ +L +T E+ + V E+ +P+++A ++A I
Sbjct: 61 SDKIEITICTARPGLVIGKKGAEIDALKSELFKLTGKEVWIEVEEIKRPDLDAKIVADGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLERR+ FRRAMK+A+QSA GA G+KV SGRL GAE++RTE Y EG PL TLRA
Sbjct: 121 AKQLERRIAFRRAMKKAMQSATDAGALGIKVQVSGRLGGAEIARTEWYKEGSTPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
ID+ AET YGS G+KV++ ++ +
Sbjct: 181 DIDFAYGRAETTYGSIGVKVWIYRGEDTQPTRQPTE 216
>gi|261880876|ref|ZP_06007303.1| 30S ribosomal protein S3 [Prevotella bergensis DSM 17361]
gi|270332383|gb|EFA43169.1| 30S ribosomal protein S3 [Prevotella bergensis DSM 17361]
Length = 241
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 102/220 (46%), Positives = 150/220 (68%), Gaps = 1/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ W+S WF G ++G L ED KIR+YL L++A V++I+IERT
Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWF-GGKDFGDNLVEDKKIRKYLNKRLEKASVSRIVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I + +ARPG++IGK G D+++++++L N+ +I +++ EV KPE++AT++A++I
Sbjct: 60 LKLVTITICTARPGIVIGKGGQDVDRLKEELKNLFKKDIQINIFEVKKPELDATIVAKNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A Q+E + +RRA+K AVQ+ MR GA+G+KV SGRLNGAE++RTE + EGR PL T RA
Sbjct: 120 ASQIEHMMAYRRAIKMAVQNTMRAGAEGIKVQISGRLNGAEMARTEMFKEGRTPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
IDY A T G GIKV++ + D + +
Sbjct: 180 DIDYCQTEALTKVGLLGIKVWICRGEVYGKRDLSPNFTQE 219
>gi|237804873|ref|YP_002889027.1| 30S ribosomal protein S3 [Chlamydia trachomatis B/TZ1A828/OT]
gi|255311340|ref|ZP_05353910.1| 30S ribosomal protein S3 [Chlamydia trachomatis 6276]
gi|255317641|ref|ZP_05358887.1| 30S ribosomal protein S3 [Chlamydia trachomatis 6276s]
gi|231273173|emb|CAX10086.1| SSU ribosomal protein S3P [Chlamydia trachomatis B/TZ1A828/OT]
gi|296436055|gb|ADH18229.1| 30S ribosomal protein S3 [Chlamydia trachomatis G/9768]
gi|296436983|gb|ADH19153.1| 30S ribosomal protein S3 [Chlamydia trachomatis G/11222]
gi|296437916|gb|ADH20077.1| 30S ribosomal protein S3 [Chlamydia trachomatis G/11074]
gi|297140416|gb|ADH97174.1| 30S ribosomal protein S3 [Chlamydia trachomatis G/9301]
Length = 224
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 103/208 (49%), Positives = 141/208 (67%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK PI FR V W S W+ E+G L ED+KIRE+L+ G A +++R
Sbjct: 1 MGQKGCPIGFRTAVTKKWRSLWYGNNQEFGKFLIEDVKIREFLKKKPSCQGAAGFVVKRM 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++ARPGL+IGKKG ++E ++ +L +T ++ + + EV +PE+NA L+A I
Sbjct: 61 SGKIEVTIHTARPGLVIGKKGAEVESLKAELKKLTGKDVWVEIAEVKRPELNAQLVADGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+ERRV FRRAMK+A+QS M GA GVKV SGRL GAE++R+E Y GRVPL TLRA
Sbjct: 121 AKQIERRVSFRRAMKKALQSVMDAGALGVKVQVSGRLAGAEIARSEWYKNGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
IDY TA AET YG GIKV+++L ++
Sbjct: 181 DIDYATASAETTYGIIGIKVWINLGEKK 208
>gi|225158906|ref|ZP_03725220.1| ribosomal protein S3 [Opitutaceae bacterium TAV2]
gi|224802524|gb|EEG20782.1| ribosomal protein S3 [Opitutaceae bacterium TAV2]
Length = 212
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 104/207 (50%), Positives = 147/207 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP+ FRL V W SRW+A ++ LLHED IR L LKQA V +I IER
Sbjct: 1 MGQKTNPVGFRLAVRRNWQSRWYATKKDFAKLLHEDQIIRGKLMEKLKQASVPRIFIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG+KG +IEKI+++++ +T EI L + EV KPEI A L+A+++
Sbjct: 61 SNRVRVKIFTARPGIVIGRKGQEIEKIKEEIAKLTGREILLDIQEVKKPEIEAQLVAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR+ FRRAMK+AV+ AM GA+G+++ SGRL G++++R E +GRVPL TLR
Sbjct: 121 ALQLERRIAFRRAMKKAVEIAMTLGAEGIRIQCSGRLGGSDIARREWQRKGRVPLHTLRE 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207
+IDYG + A+T YG G+K ++ +DE
Sbjct: 181 NIDYGFSEAQTVYGKIGVKCWICKKDE 207
>gi|325104862|ref|YP_004274516.1| SSU ribosomal protein S3P [Pedobacter saltans DSM 12145]
gi|324973710|gb|ADY52694.1| SSU ribosomal protein S3P [Pedobacter saltans DSM 12145]
Length = 257
Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats.
Identities = 97/212 (45%), Positives = 147/212 (69%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ W+S W+ G+ Y L ED KIR+YL + + GV+K++IERT
Sbjct: 1 MGQKANPIGNRLGIIRGWDSNWY-GGNNYSDKLVEDEKIRKYLSVRVAKGGVSKVVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + +++ARPG++IGK G++++KI+++L +T ++ +++ E+ +PE++A L+A +
Sbjct: 60 LKRITVTIHTARPGIVIGKGGSEVDKIKEELKKLTKKDVQINIFEIKRPELDAKLVADGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRAMK ++ S MR GA+G+K++ SGRL GAE++R+E Y EGR+PL T RA
Sbjct: 120 AKQLEARISFRRAMKTSIASTMRMGAEGIKIMCSGRLGGAEMARSEQYKEGRIPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
IDY A T YG GIKV++ + D
Sbjct: 180 DIDYALGEALTTYGKIGIKVWICKGEVYGKRD 211
>gi|257463967|ref|ZP_05628352.1| SSU ribosomal protein S3P [Fusobacterium sp. D12]
gi|317061490|ref|ZP_07925975.1| SSU ribosomal protein S3P [Fusobacterium sp. D12]
gi|313687166|gb|EFS24001.1| SSU ribosomal protein S3P [Fusobacterium sp. D12]
Length = 218
Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 95/218 (43%), Positives = 146/218 (66%), Gaps = 1/218 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ +W+S W+A EY HED+K+RE+++ AGV+K+ +ERT
Sbjct: 1 MGQKVDPRGLRLGITRSWDSNWYADKKEYAKYFHEDMKVREFVKKAYYHAGVSKVKLERT 60
Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
+++ + + G+IIG+KG +IE +R KL MT ++ + V EV + +A L+A+S
Sbjct: 61 SPSQITVLISAGKAGIIIGRKGAEIESLRAKLEKMTGKKVTVKVQEVKEFNKDAVLVAES 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA Q+E+R+ +++AM +A+ AM+ GA G+KV+ SGRLNGAE++R+E +EG+VPL TLR
Sbjct: 121 IATQIEKRIAYKKAMTQAIGRAMKAGAKGIKVMVSGRLNGAEIARSEWAVEGKVPLHTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
A IDY A A T YG+ GIKV+V + + + A
Sbjct: 181 ADIDYAVATAHTTYGALGIKVWVFHGEVLPTAKEGGEA 218
>gi|71902239|ref|ZP_00684246.1| ribosomal protein S3 [Xylella fastidiosa Ann-1]
gi|71728013|gb|EAO30227.1| ribosomal protein S3 [Xylella fastidiosa Ann-1]
Length = 239
Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 106/208 (50%), Positives = 153/208 (73%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K++PI RLG++ WNS+W+A +E+ L DLK+R+ L+ + QAG++KILIER
Sbjct: 1 MGHKVHPIGIRLGISADWNSKWYANKAEFARYLAADLKVRQVLRKKMSQAGISKILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ ++ ARPG++IGK+G DI +RK++S++ +H++V EV KPE++A L+A+S+
Sbjct: 61 SNTACVSMHVARPGVVIGKRGEDIGMLRKQVSDIMGVPVHINVIEVRKPELDAQLVAESV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERR++FRRAMKR+V +A+R GA G+K+ +GRLNGAE++R+E Y EGRVPLQTLRA
Sbjct: 121 AQQLERRIMFRRAMKRSVSNAIRLGALGIKISVAGRLNGAEIARSEWYREGRVPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
I YG + A T YG G+KV + D
Sbjct: 181 DIGYGFSEAHTNYGVTGVKVLMYHGDIF 208
>gi|300812370|ref|ZP_07092805.1| ribosomal protein S3 [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|300496675|gb|EFK31762.1| ribosomal protein S3 [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
Length = 223
Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 101/225 (44%), Positives = 152/225 (67%), Gaps = 2/225 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KINPI FRLGVN W ++W+A Y L+EDL+IR++L LK A V+ + IER
Sbjct: 1 MGSKINPIGFRLGVNRDWEAKWYA-ARGYKETLNEDLRIRKFLDEKLKDASVSTVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++ARPG++IGK G ++E + K+++ +TN ++H+++ E+ KP+++A L+A SI
Sbjct: 60 ANRVNITIHTARPGMVIGKGGAEVEALNKEINALTNKQVHINIVEIKKPDLDAKLVADSI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRA ++A Q +MR GA G+KV +GRLNGA+++R E + EG VPL TLRA
Sbjct: 120 ARQLEARIAFRRASRQAAQRSMRTGAKGIKVQTAGRLNGADMARREWHTEGSVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY A T YG G+KV+++ + + + PA + +K
Sbjct: 180 DIDYAWVNAFTTYGEIGVKVWINRGEILPGRKNQ-PAKRSKGGKK 223
>gi|15605251|ref|NP_220037.1| 30S ribosomal protein S3 [Chlamydia trachomatis D/UW-3/CX]
gi|7388191|sp|O84527|RS3_CHLTR RecName: Full=30S ribosomal protein S3
gi|3328959|gb|AAC68123.1| S3 Ribosomal Protein [Chlamydia trachomatis D/UW-3/CX]
gi|297748652|gb|ADI51198.1| SSU ribosomal protein S3P [Chlamydia trachomatis D-EC]
gi|297749532|gb|ADI52210.1| SSU ribosomal protein S3P [Chlamydia trachomatis D-LC]
Length = 224
Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 103/208 (49%), Positives = 142/208 (68%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK PI FR V W S W+ E+G L ED+KIRE+L+ G A +++R
Sbjct: 1 MGQKGCPIGFRTAVTKKWRSLWYGNNQEFGKFLIEDVKIREFLKKKPSCQGAAGFVVKRM 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++ARPGL+IGKKG ++E ++ +L +T+ ++ + + EV +PE+NA L+A I
Sbjct: 61 SGKIEVTIHTARPGLVIGKKGAEVESLKAELKKLTDKDVWVEIAEVKRPELNAQLVADGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+ERRV FRRAMK+A+QS M GA GVKV SGRL GAE++R+E Y GRVPL TLRA
Sbjct: 121 AKQIERRVSFRRAMKKALQSVMDAGALGVKVQVSGRLAGAEIARSEWYKNGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
IDY TA AET YG GIKV+++L ++
Sbjct: 181 DIDYATASAETTYGIIGIKVWINLGEKK 208
>gi|166154737|ref|YP_001654855.1| 30S ribosomal protein S3 [Chlamydia trachomatis 434/Bu]
gi|166155612|ref|YP_001653867.1| 30S ribosomal protein S3 [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|301336011|ref|ZP_07224255.1| 30S ribosomal protein S3 [Chlamydia trachomatis L2tet1]
gi|226697681|sp|B0B896|RS3_CHLT2 RecName: Full=30S ribosomal protein S3
gi|226697682|sp|B0BCG1|RS3_CHLTB RecName: Full=30S ribosomal protein S3
gi|165930725|emb|CAP04222.1| SSU ribosomal protein S3P [Chlamydia trachomatis 434/Bu]
gi|165931600|emb|CAP07176.1| SSU ribosomal protein S3P [Chlamydia trachomatis
L2b/UCH-1/proctitis]
Length = 224
Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 102/208 (49%), Positives = 141/208 (67%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK P+ FR V W S W+ E+G L ED+KIRE+L+ G A +++R
Sbjct: 1 MGQKGCPVGFRTAVTKKWRSLWYGNNQEFGKFLIEDVKIREFLKKKPSCQGAAGFVVKRM 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++ARPGL+IGKKG ++E ++ +L +T ++ + + EV +PE+NA L+A I
Sbjct: 61 SGKIEVTIHTARPGLVIGKKGAEVESLKAELKKLTGKDVWVEIAEVKRPELNAQLVADGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+ERRV FRRAMK+A+QS M GA GVKV SGRL GAE++R+E Y GRVPL TLRA
Sbjct: 121 AKQIERRVSFRRAMKKALQSVMDAGALGVKVQVSGRLAGAEIARSEWYKNGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
IDY TA AET YG GIKV+++L ++
Sbjct: 181 DIDYATASAETTYGIIGIKVWINLGEKK 208
>gi|124003668|ref|ZP_01688516.1| ribosomal protein S3 [Microscilla marina ATCC 23134]
gi|123990723|gb|EAY30190.1| ribosomal protein S3 [Microscilla marina ATCC 23134]
Length = 238
Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 97/212 (45%), Positives = 150/212 (70%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP RLG+ W S W+ G Y L ED KIR+Y+ + + G+++I+IERT
Sbjct: 1 MGQKVNPNGLRLGIIKGWESNWY-GGKNYSNKLLEDEKIRKYIHARIPKGGISRIIIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + +++ARPG++IG+ G +++KI+++L +T+ ++ +++ EV +PE++A L+ +SI
Sbjct: 60 LKRITLTIHTARPGVVIGRGGAEVDKIKEELKKLTSKDVQINIFEVKRPELDAKLVGESI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE R+ +RRAMK+A+ +AMR GA G+K+ A+GRL GAE++R+E Y EGR+PL TLRA
Sbjct: 120 AQQLEARISYRRAMKQAIAAAMRVGAQGIKIKAAGRLGGAEMARSEQYKEGRIPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
IDY + A T YG GIKV++ ++ D
Sbjct: 180 EIDYAISEANTVYGKIGIKVWIFKKEVYGKPD 211
>gi|257453265|ref|ZP_05618564.1| SSU ribosomal protein S3P [Fusobacterium sp. 3_1_5R]
gi|257467140|ref|ZP_05631451.1| SSU ribosomal protein S3P [Fusobacterium gonidiaformans ATCC 25563]
gi|315918271|ref|ZP_07914511.1| SSU ribosomal protein S3P [Fusobacterium gonidiaformans ATCC 25563]
gi|317059799|ref|ZP_07924284.1| SSU ribosomal protein S3P [Fusobacterium sp. 3_1_5R]
gi|313685475|gb|EFS22310.1| SSU ribosomal protein S3P [Fusobacterium sp. 3_1_5R]
gi|313692146|gb|EFS28981.1| SSU ribosomal protein S3P [Fusobacterium gonidiaformans ATCC 25563]
Length = 218
Score = 242 bits (617), Expect = 4e-62, Method: Composition-based stats.
Identities = 96/218 (44%), Positives = 146/218 (66%), Gaps = 1/218 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ +W+S W+A EY HED+K+RE+++ AGV+K+ +ERT
Sbjct: 1 MGQKVDPRGLRLGITRSWDSNWYADKKEYAKYFHEDVKVREFVKKAYYHAGVSKVKLERT 60
Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
+++ + + G+IIG+KG +IE +R KL MT +I + V EV + +A L+A+S
Sbjct: 61 SPSQITVLISAGKAGIIIGRKGAEIESLRAKLEKMTGKKITVKVQEVKEFNKDAVLVAES 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA Q+E+R+ +++AM +A+ AM+ GA G+KV+ SGRLNGAE++R+E +EG+VPL TLR
Sbjct: 121 IATQIEKRIAYKKAMTQAIGRAMKAGAKGIKVMVSGRLNGAEIARSEWAVEGKVPLHTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
A IDY A A T YG+ GIKV+V + + + A
Sbjct: 181 ADIDYAVATAHTTYGALGIKVWVFHGEVLPTAKEGGEA 218
>gi|113476573|ref|YP_722634.1| 30S ribosomal protein S3 [Trichodesmium erythraeum IMS101]
gi|122964705|sp|Q110B3|RS3_TRIEI RecName: Full=30S ribosomal protein S3
gi|110167621|gb|ABG52161.1| SSU ribosomal protein S3P [Trichodesmium erythraeum IMS101]
Length = 242
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 94/220 (42%), Positives = 140/220 (63%), Gaps = 2/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRLG+ SRW+A Y L ED KIR+Y++ L AG+++I +ER
Sbjct: 1 MGQKIHPTGFRLGITQEHRSRWYADPKNYPDTLQEDHKIRQYVKATLANAGISQIRVERK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLIAQ 118
+ + V +ARPG+++G+ G I+ +R L + +N +I ++V EV K + +A LI +
Sbjct: 61 AEQIDLEVRTARPGVVVGRGGAGIDSLRVGLQKLLGSNRQIRINVVEVTKVDTDAMLIGE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
IAQQLE+RV FRR +++A+ A + G +G+K+ SGR+NGAE++RTE EG VPL TL
Sbjct: 121 YIAQQLEKRVSFRRVVRQAITRAQKAGVEGIKIQVSGRVNGAEIARTEVTREGSVPLHTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
RA+IDY A+T YG GIK++V + + + A
Sbjct: 181 RANIDYAYCTAKTIYGILGIKIWVFKGEIIPGQEEIANAK 220
>gi|281358719|ref|ZP_06245196.1| ribosomal protein S3 [Victivallis vadensis ATCC BAA-548]
gi|281314845|gb|EFA98881.1| ribosomal protein S3 [Victivallis vadensis ATCC BAA-548]
Length = 235
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 106/233 (45%), Positives = 154/233 (66%), Gaps = 6/233 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE-----YGALLHEDLKIREYLQCHLKQAGVAKI 55
MGQK+NPI R + W SRWFA +G L EDL IR++++ QA +A+I
Sbjct: 1 MGQKVNPIGLRTALTKNWESRWFADKKSGGKTLFGEWLQEDLAIRKFIKEKFAQAAIARI 60
Query: 56 LIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT-NSEIHLSVNEVPKPEINAT 114
IER R+ + SARPGL+IGKKG ++E ++ +++ +T E+ + + EV + E NA
Sbjct: 61 QIERFANRVRVTICSARPGLLIGKKGAELESMKAQVAKLTAGKEVFIEIAEVRRAETNAQ 120
Query: 115 LIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVP 174
L++++IAQQLERR+ FRRAMKRA+Q+AM GADG+K+ +GRL GAEL+R E Y EGRVP
Sbjct: 121 LVSENIAQQLERRIGFRRAMKRAIQTAMDMGADGIKINCAGRLGGAELAREEQYKEGRVP 180
Query: 175 LQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
L TL+A+IDYG A T G+ G+KV++ +D + D + A + +V + +
Sbjct: 181 LHTLKANIDYGFTEANTTAGTIGVKVWICHKDSTEEQDYAVNAKKSKVQKGSA 233
>gi|258648153|ref|ZP_05735622.1| ribosomal protein S3 [Prevotella tannerae ATCC 51259]
gi|260852034|gb|EEX71903.1| ribosomal protein S3 [Prevotella tannerae ATCC 51259]
Length = 243
Score = 241 bits (616), Expect = 5e-62, Method: Composition-based stats.
Identities = 99/221 (44%), Positives = 146/221 (66%), Gaps = 1/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ W S W+ GS YG L ED K+R YL L +A V++I+IERT
Sbjct: 1 MGQKVNPISNRLGIIRGWESNWY-GGSNYGDTLLEDSKLRRYLNARLAKASVSRIIIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I + ++RPG+IIGK G +++K++++L +T+ ++ +++ EV +P+++A ++ QSI
Sbjct: 60 LKLITITICTSRPGIIIGKGGQEVDKLKEELHKITDKDVQINIFEVKRPDLDANIVGQSI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E ++ +RRA K A+Q+AMR GA+G+KV SGRLNGAE++R E + EGR PL T RA
Sbjct: 120 ARQIEGKIAYRRAAKMAIQNAMRMGAEGIKVQVSGRLNGAEMARKEMFKEGRTPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
IDY A T G GIKV++ + D R
Sbjct: 180 DIDYCQTTALTKVGLIGIKVWICRGEVYGKKDLAPNFTPER 220
>gi|257456898|ref|ZP_05622079.1| ribosomal protein S3 [Treponema vincentii ATCC 35580]
gi|257445607|gb|EEV20669.1| ribosomal protein S3 [Treponema vincentii ATCC 35580]
Length = 246
Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats.
Identities = 108/228 (47%), Positives = 144/228 (63%), Gaps = 2/228 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--HLKQAGVAKILIE 58
MGQK+NPI RLG+N TW+SRW+A EY LLHEDLKIR LQ K A VA I I
Sbjct: 1 MGQKVNPIGLRLGINKTWSSRWYASPREYADLLHEDLKIRAMLQTLPECKNADVADIEII 60
Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118
R + I++++ARPG+IIG KG +IEKI + N ++ + + EV + E+NA+L+AQ
Sbjct: 61 RHPQRVTIVIHTARPGVIIGTKGANIEKIGAIIQKELNKKVQIKIKEVKRAELNASLVAQ 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
++A+QL R FR+A+K+ S M+ GA G+K+ SGRL GAE+SRTE EGR+PL TL
Sbjct: 121 NVARQLMGRASFRKALKQGCFSTMKAGAQGIKIRVSGRLGGAEMSRTEEMKEGRIPLHTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
RA IDYG A A T YG G+KV++ S + K+
Sbjct: 181 RADIDYGFAEAHTTYGKIGVKVWLYSGMMYSSDQKDDAGLLLKKQRKE 228
>gi|297621714|ref|YP_003709851.1| 30S ribosomal protein S3 [Waddlia chondrophila WSU 86-1044]
gi|297377015|gb|ADI38845.1| 30S ribosomal protein S3 [Waddlia chondrophila WSU 86-1044]
Length = 215
Score = 241 bits (615), Expect = 6e-62, Method: Composition-based stats.
Identities = 100/214 (46%), Positives = 145/214 (67%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI FRL W S+WFA E+G L ED +IREYL + G +KI I R
Sbjct: 1 MGQKVNPIGFRLVRKKDWRSKWFANKQEFGDFLVEDRRIREYLLKKSQLVGTSKIKIRRM 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ + + +ARPGL+IGKKG +I+ ++ +L +T ++ + V E+ +P+ +A ++A I
Sbjct: 61 SEKIEVTIVTARPGLVIGKKGAEIDALKTELYKLTGKQVWVEVEEIKRPDADAQVVADGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLERR+ FRRA+K+A+QS++ GA G+KV SGRL GAE++RTE Y EG +PL TLRA
Sbjct: 121 AKQLERRIPFRRALKKAIQSSLDAGAVGIKVQTSGRLGGAEIARTEWYKEGSIPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
+IDY T+ AET YG+ G+KV+++ D+
Sbjct: 181 NIDYATSRAETTYGTIGVKVWINRGDDNYSKKEN 214
>gi|22297631|ref|NP_680878.1| 30S ribosomal protein S3 [Thermosynechococcus elongatus BP-1]
gi|27734497|sp|P59187|RS3_THEEB RecName: Full=30S ribosomal protein S3
gi|22293808|dbj|BAC07640.1| 30S ribosomal protein S3 [Thermosynechococcus elongatus BP-1]
Length = 238
Score = 241 bits (615), Expect = 6e-62, Method: Composition-based stats.
Identities = 102/227 (44%), Positives = 143/227 (62%), Gaps = 2/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+PI FRLG+ SRW+A Y LL ED +IR ++ L AG+A++ IER
Sbjct: 1 MGQKIHPIGFRLGITQDHRSRWYADSDRYPELLQEDHRIRTFINQQLANAGIAEVRIERK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLIAQ 118
+ + +ARPG+++GK G IE++RK+L M N I ++V EV + + A+L+A+
Sbjct: 61 ADQVELQIRTARPGVVVGKGGQGIEELRKQLRQMLPANRTIKVNVVEVNRVDAEASLLAE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
I QQLERRV FRRA+++A+Q A R G +G+KV +GRLNGAE++RTE EGRVPL TL
Sbjct: 121 YITQQLERRVAFRRAVRQAIQRAQRAGIEGIKVQVAGRLNGAEIARTEWTREGRVPLHTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
RA IDY A T YG G+KV++ + + +P R +
Sbjct: 181 RADIDYAYRTARTIYGILGVKVWIFKGEVLPGQTEAVPREATRRSPQ 227
>gi|291298716|ref|YP_003509994.1| 30S ribosomal protein S3 [Stackebrandtia nassauensis DSM 44728]
gi|290567936|gb|ADD40901.1| ribosomal protein S3 [Stackebrandtia nassauensis DSM 44728]
Length = 265
Score = 241 bits (615), Expect = 6e-62, Method: Composition-based stats.
Identities = 98/208 (47%), Positives = 149/208 (71%), Gaps = 2/208 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P +RLG++ W SRW+A Y + ED+KIR+ + +++AG+A++ IERT
Sbjct: 1 MGQKIHPHGYRLGISSGWTSRWYAD-KSYAEYVGEDVKIRKLMSQGMERAGIAEVDIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG+KG + +++R +L +T ++ ++ EV PE NA L+AQ+I
Sbjct: 60 RDRVRVDIHTARPGIVIGRKGAEADRLRTRLEKLTGKQVQFNIIEVKNPESNAQLVAQAI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGA-DGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A+QL RV FRRAM++++QSA+R G+KV SGRL GAE+SR+E YLEG+VPL TLR
Sbjct: 120 AEQLASRVNFRRAMRKSIQSALRNPTVKGIKVACSGRLGGAEMSRSEFYLEGQVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDE 207
A+IDYG A T++G G+KV++ +E
Sbjct: 180 ANIDYGLFEARTSFGRIGVKVWIYRDEE 207
>gi|291457208|ref|ZP_06596598.1| ribosomal protein S3 [Bifidobacterium breve DSM 20213]
gi|291381043|gb|EFE88561.1| ribosomal protein S3 [Bifidobacterium breve DSM 20213]
Length = 266
Score = 241 bits (615), Expect = 6e-62, Method: Composition-based stats.
Identities = 100/224 (44%), Positives = 148/224 (66%), Gaps = 4/224 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE----YGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQKINP +RLG+ S+WF+ ++ Y + ED +IR+ + L++AGV++I+
Sbjct: 1 MGQKINPFGYRLGITENHRSKWFSDSNKAGERYRDFVLEDDQIRKEMSKDLERAGVSRIV 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + E++R KL +T ++ L++ EV ++A L+
Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEAERVRAKLEKLTGKQVQLNIFEVKNAALDAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ IA+QL RV FRRAM++A Q AM GA G+++ SGRL GAE+SR+E Y EGRVPLQ
Sbjct: 121 AQGIAEQLTNRVTFRRAMRKAQQDAMHAGAKGIRIKLSGRLGGAEMSRSEFYREGRVPLQ 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
TLRA IDYG A+T YG G+KV++ D A ++
Sbjct: 181 TLRALIDYGFFEAKTTYGRIGVKVWIYKGDMTESEFEEQQAQQN 224
>gi|224178095|ref|YP_002600920.1| ribosomal protein S3 [Pyramimonas parkeae]
gi|215882762|gb|ACJ71135.1| ribosomal protein S3 [Pyramimonas parkeae]
Length = 212
Score = 241 bits (614), Expect = 7e-62, Method: Composition-based stats.
Identities = 94/206 (45%), Positives = 138/206 (66%), Gaps = 2/206 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI FR+GV +S WF++ ++Y +LL EDL IR YL+ +AG++ I + R
Sbjct: 1 MGQKVHPIGFRIGVTQNHSSHWFSKPNQYASLLQEDLTIRSYLKEKCVEAGISNIQLYRK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN--SEIHLSVNEVPKPEINATLIAQ 118
I +++ARP +I+G+KG ++ +R+ L + N + + V E+ +P+I A L+A+
Sbjct: 61 ADRVEIELHAARPVVILGRKGNGLDSLRQGLQSKLNQTRQFAIQVVEIREPDIEARLVAE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
I+ QLE+R+ FRRAMK+ + A R G +G+K+ SGRLNGAE++R+E EGRVPLQTL
Sbjct: 121 FISSQLEKRIPFRRAMKQGLLRAKRAGVEGMKIQVSGRLNGAEIARSEWVREGRVPLQTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSL 204
RA IDY A T YG GIKV+V
Sbjct: 181 RADIDYCHHEANTIYGILGIKVWVFK 206
>gi|15835423|ref|NP_297182.1| 30S ribosomal protein S3 [Chlamydia muridarum Nigg]
gi|270285603|ref|ZP_06194997.1| 30S ribosomal protein S3 [Chlamydia muridarum Nigg]
gi|270289613|ref|ZP_06195915.1| 30S ribosomal protein S3 [Chlamydia muridarum Weiss]
gi|301336999|ref|ZP_07225201.1| 30S ribosomal protein S3 [Chlamydia muridarum MopnTet14]
gi|13633874|sp|Q9PJM0|RS3_CHLMU RecName: Full=30S ribosomal protein S3
gi|7190837|gb|AAF39612.1| ribosomal protein S3 [Chlamydia muridarum Nigg]
Length = 224
Score = 241 bits (614), Expect = 7e-62, Method: Composition-based stats.
Identities = 101/208 (48%), Positives = 141/208 (67%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK P+ FR V W S W+ E+G L ED++IRE+L+ G A +++R
Sbjct: 1 MGQKGCPVGFRTAVTKKWRSLWYGNNQEFGKFLIEDVRIREFLKKKPSCQGAAGFVVKRM 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++ARPGL+IGKKG ++E ++ +L +T ++ + + EV +PE+NA L+A I
Sbjct: 61 SGKIEVTIHTARPGLVIGKKGAEVESLKAELKKLTGKDVWVEIAEVKRPELNAQLVADGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+ERRV FRRAMK+A+QS M GA GVKV SGRL GAE++R+E Y GRVPL TLRA
Sbjct: 121 AKQIERRVSFRRAMKKALQSVMDAGALGVKVQVSGRLAGAEIARSEWYKNGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
IDY TA AET YG GIKV+++L ++
Sbjct: 181 DIDYATASAETTYGIIGIKVWINLGEKK 208
>gi|322378773|ref|ZP_08053202.1| 30S ribosomal protein S3 [Helicobacter suis HS1]
gi|321148803|gb|EFX43274.1| 30S ribosomal protein S3 [Helicobacter suis HS1]
Length = 230
Score = 241 bits (614), Expect = 8e-62, Method: Composition-based stats.
Identities = 111/208 (53%), Positives = 150/208 (72%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+N W SRWF A + ED +IR++L+ L AGV++ILIER
Sbjct: 1 MGQKVNPIGLRLGINRNWTSRWFPSSGVAVANIEEDYRIRKFLKKELYYAGVSEILIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ V +ARPGLIIGKKG DIEK++ L ++ E+ L++ EV +P+ +A L A+++
Sbjct: 61 AKKLRVTVVAARPGLIIGKKGVDIEKVKTSLKDLIRKEVALNIKEVKRPQADAQLAAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV FRRAMK+ +Q+AM+ GA G+KV SGRL GAE++RTE Y+EGRVPL TLRA
Sbjct: 121 ATQLEKRVAFRRAMKKVMQTAMKAGARGIKVRVSGRLAGAEIARTEWYMEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
IDYG A A T YG+ G+KV++ + +
Sbjct: 181 KIDYGFAEAFTVYGNIGVKVWLFKGEVL 208
>gi|330718966|ref|ZP_08313566.1| 30S ribosomal protein S3 [Leuconostoc fallax KCTC 3537]
Length = 225
Score = 241 bits (614), Expect = 8e-62, Method: Composition-based stats.
Identities = 99/219 (45%), Positives = 150/219 (68%), Gaps = 8/219 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FR+GV W+++WFA ++Y LHEDL+IR++++ +L A V ++ IER+
Sbjct: 1 MGQKINPTGFRVGVIRDWDAKWFADKADYANQLHEDLRIRKFIEKNLADASVDRVEIERS 60
Query: 61 HK-NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-------SEIHLSVNEVPKPEIN 112
K I +++A+PG++IGK G+++EK+R +L+ +T+ + +++ E+ KP+++
Sbjct: 61 TKSRVDISIHTAKPGMVIGKGGSEVEKLRTQLAKLTDVDEKGRAKRVFINIVEIKKPDLS 120
Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172
A L+ Q +A LERRV FRRAM+ A+Q A R GA G+K++ SGRLNGA+++R E Y EG
Sbjct: 121 AHLVGQQVAGDLERRVAFRRAMRGAIQRATRSGAKGIKIMVSGRLNGADIARIEQYTEGT 180
Query: 173 VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
VPL TLRA IDY A+TAYG GIK ++ D +
Sbjct: 181 VPLHTLRADIDYSWDEADTAYGHLGIKTWIYRGDILPKK 219
>gi|11467723|ref|NP_050775.1| ribosomal protein S3 [Guillardia theta]
gi|3914822|sp|O46900|RR3_GUITH RecName: Full=30S ribosomal protein S3, chloroplastic
gi|3603048|gb|AAC35709.1| ribosomal protein S3 [Guillardia theta]
Length = 216
Score = 240 bits (613), Expect = 9e-62, Method: Composition-based stats.
Identities = 100/211 (47%), Positives = 136/211 (64%), Gaps = 2/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ FRL + S WFA Y LL +D KIR Y+ L+ AG++KI I R
Sbjct: 1 MGQKVNPLGFRLRITSQHRSSWFATKESYPQLLEQDFKIRSYINRELEAAGISKIEISRN 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEI--HLSVNEVPKPEINATLIAQ 118
+ VY++RPG+I+G+ G IEKI+ + + +I ++V E+ P+ +A LI +
Sbjct: 61 ANQLEVSVYTSRPGIIVGRSGLGIEKIKTDILRLLKQDISIRINVIELTNPDADANLIGE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
IAQQLE+RV FRRA ++A+Q A R G+KV SGRLNGAE++R+E EGRVPLQTL
Sbjct: 121 FIAQQLEKRVAFRRATRQAIQKAQRANVQGIKVQVSGRLNGAEIARSEWVREGRVPLQTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVS 209
RA+IDY T A T YG GIKV+V ++
Sbjct: 181 RANIDYATKEAHTTYGILGIKVWVFNGEQTP 211
>gi|76789259|ref|YP_328345.1| 30S ribosomal protein S3 [Chlamydia trachomatis A/HAR-13]
gi|91207647|sp|Q3KLH5|RS3_CHLTA RecName: Full=30S ribosomal protein S3
gi|76167789|gb|AAX50797.1| SSU ribosomal protein S3P [Chlamydia trachomatis A/HAR-13]
Length = 224
Score = 240 bits (613), Expect = 9e-62, Method: Composition-based stats.
Identities = 103/208 (49%), Positives = 141/208 (67%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK PI FR V W S W+ E+G L ED+KIRE+L+ G A +++R
Sbjct: 1 MGQKGCPIGFRTAVTKKWRSLWYGNNQEFGKFLIEDVKIREFLKKKPSCQGAAGFVVKRM 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++ARPGL+IGKKG ++E ++ +L +T ++ + + EV +PE+NA L+A I
Sbjct: 61 SGKIEVTIHTARPGLVIGKKGAEVESLKAELKKLTGKDVWVEIAEVKRPELNAQLVADGI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+ERRV FRRAMK+A+QS M GA GVKV SGRL GAE++R+E Y GRVPL TLRA
Sbjct: 121 AKQIERRVSFRRAMKKALQSVMDAGALGVKVQVSGRLAGAEIARSEWYKNGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
IDY TA AET YG GIKV+++L ++
Sbjct: 181 DIDYATASAETTYGIIGIKVWINLSEKK 208
>gi|23336507|ref|ZP_00121721.1| COG0092: Ribosomal protein S3 [Bifidobacterium longum DJO10A]
gi|23466136|ref|NP_696739.1| 30S ribosomal protein S3 [Bifidobacterium longum NCC2705]
gi|189440575|ref|YP_001955656.1| 30S ribosomal protein S3 [Bifidobacterium longum DJO10A]
gi|227546482|ref|ZP_03976531.1| ribosomal protein S3 [Bifidobacterium longum subsp. infantis ATCC
55813]
gi|239621016|ref|ZP_04664047.1| 30S ribosomal protein S3 [Bifidobacterium longum subsp. infantis
CCUG 52486]
gi|296454864|ref|YP_003662008.1| 30S ribosomal protein S3 [Bifidobacterium longum subsp. longum
JDM301]
gi|312133880|ref|YP_004001219.1| rpsc [Bifidobacterium longum subsp. longum BBMN68]
gi|317483444|ref|ZP_07942434.1| ribosomal protein S3 [Bifidobacterium sp. 12_1_47BFAA]
gi|322689923|ref|YP_004209657.1| 30S ribosomal protein S3 [Bifidobacterium longum subsp. infantis
157F]
gi|322691864|ref|YP_004221434.1| 30S ribosomal protein S3 [Bifidobacterium longum subsp. longum JCM
1217]
gi|27734490|sp|P59179|RS3_BIFLO RecName: Full=30S ribosomal protein S3
gi|226697665|sp|B3DQC0|RS3_BIFLD RecName: Full=30S ribosomal protein S3
gi|23326872|gb|AAN25375.1| 30S ribosomal protein S3 [Bifidobacterium longum NCC2705]
gi|189429010|gb|ACD99158.1| Ribosomal protein S3 [Bifidobacterium longum DJO10A]
gi|227213031|gb|EEI80910.1| ribosomal protein S3 [Bifidobacterium longum subsp. infantis ATCC
55813]
gi|239516117|gb|EEQ55984.1| 30S ribosomal protein S3 [Bifidobacterium longum subsp. infantis
CCUG 52486]
gi|291516463|emb|CBK70079.1| SSU ribosomal protein S3P [Bifidobacterium longum subsp. longum F8]
gi|296184296|gb|ADH01178.1| ribosomal protein S3 [Bifidobacterium longum subsp. longum JDM301]
gi|311773173|gb|ADQ02661.1| RpsC [Bifidobacterium longum subsp. longum BBMN68]
gi|316915130|gb|EFV36562.1| ribosomal protein S3 [Bifidobacterium sp. 12_1_47BFAA]
gi|320456720|dbj|BAJ67342.1| 30S ribosomal protein S3 [Bifidobacterium longum subsp. longum JCM
1217]
gi|320461259|dbj|BAJ71879.1| 30S ribosomal protein S3 [Bifidobacterium longum subsp. infantis
157F]
Length = 267
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 101/224 (45%), Positives = 149/224 (66%), Gaps = 4/224 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE----YGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQKINP +RLG+ S+WF+ ++ Y + ED +IR+ + L++AGV++I+
Sbjct: 1 MGQKINPFGYRLGITENHRSKWFSDSNKAGERYRDFVLEDDQIRKEMSKDLERAGVSRIV 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + E++R KL +T ++ L++ EV ++A L+
Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEAERVRAKLEKLTGKQVQLNIFEVKNAALDAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ IA+QL RV FRRAM++A Q AMR GA G+++ SGRL GAE+SR+E Y EGRVPLQ
Sbjct: 121 AQGIAEQLTNRVTFRRAMRKAQQDAMRAGAKGIRIKLSGRLGGAEMSRSEFYREGRVPLQ 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
TLRA IDYG A+T YG G+KV++ D A ++
Sbjct: 181 TLRALIDYGFFEAKTTYGRIGVKVWIYKGDMTESEFEEQQAQQN 224
>gi|28198359|ref|NP_778673.1| 30S ribosomal protein S3 [Xylella fastidiosa Temecula1]
gi|182681000|ref|YP_001829160.1| 30S ribosomal protein S3 [Xylella fastidiosa M23]
gi|32129995|sp|Q87E76|RS3_XYLFT RecName: Full=30S ribosomal protein S3
gi|226697777|sp|B2I8H5|RS3_XYLF2 RecName: Full=30S ribosomal protein S3
gi|28056429|gb|AAO28322.1| 30S ribosomal protein S3 [Xylella fastidiosa Temecula1]
gi|182631110|gb|ACB91886.1| ribosomal protein S3 [Xylella fastidiosa M23]
gi|307579469|gb|ADN63438.1| 30S ribosomal protein S3 [Xylella fastidiosa subsp. fastidiosa
GB514]
Length = 239
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 107/208 (51%), Positives = 154/208 (74%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K++PI RLG++ WNS+W+A +E+ L DLK+R+ L+ + QAG++KILIER
Sbjct: 1 MGHKVHPIGIRLGISADWNSKWYANKAEFARYLAADLKVRQVLRKKMSQAGISKILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ ++ ARPG++IGK+G DIE +RK++S++ +H++V EV KPE++A L+A+S+
Sbjct: 61 SNTACVSMHVARPGVVIGKRGEDIEMLRKQVSDIMGVPVHINVIEVRKPELDAQLVAESV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERR++FRRAMKR+V +A+R GA G+K+ +GRLNGAE++R+E Y EGRVPLQTLRA
Sbjct: 121 AQQLERRIMFRRAMKRSVSNAIRLGALGIKISVAGRLNGAEIARSEWYREGRVPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
I YG + A T YG G+KV + D
Sbjct: 181 DIGYGFSEAYTNYGVTGVKVLMYHGDIF 208
>gi|183601950|ref|ZP_02963319.1| 30S ribosomal protein S3 [Bifidobacterium animalis subsp. lactis
HN019]
gi|219682863|ref|YP_002469246.1| 30S ribosomal protein S3 [Bifidobacterium animalis subsp. lactis
AD011]
gi|241190439|ref|YP_002967833.1| 30S ribosomal protein S3 [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|241195845|ref|YP_002969400.1| 30S ribosomal protein S3 [Bifidobacterium animalis subsp. lactis
DSM 10140]
gi|254764512|sp|B8DW19|RS3_BIFA0 RecName: Full=30S ribosomal protein S3
gi|183218835|gb|EDT89477.1| 30S ribosomal protein S3 [Bifidobacterium animalis subsp. lactis
HN019]
gi|219620513|gb|ACL28670.1| ribosomal protein S3 [Bifidobacterium animalis subsp. lactis AD011]
gi|240248831|gb|ACS45771.1| 30S ribosomal protein S3 [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|240250399|gb|ACS47338.1| 30S ribosomal protein S3 [Bifidobacterium animalis subsp. lactis
DSM 10140]
gi|289178163|gb|ADC85409.1| SSU ribosomal protein S3P [Bifidobacterium animalis subsp. lactis
BB-12]
gi|295793426|gb|ADG32961.1| 30S ribosomal protein S3 [Bifidobacterium animalis subsp. lactis
V9]
Length = 277
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 103/223 (46%), Positives = 149/223 (66%), Gaps = 4/223 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE----YGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQKINP +RLG+ + S+WF+ ++ Y + ED IR+ + L++AGV++I+
Sbjct: 1 MGQKINPFGYRLGITESHRSKWFSDSNKVGERYRDFVLEDDAIRKVMNKDLERAGVSRII 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + E++R KL +T ++ L++ EV P I+A L+
Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEAERVRAKLEKLTGKQVQLNIFEVKNPAIDAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ IA+QL RV FRRAM++A Q AMR GA G+++ SGRL GAE+SR+E Y EGRVPLQ
Sbjct: 121 AQGIAEQLTNRVTFRRAMRKAQQDAMRAGAKGIRIKLSGRLGGAEMSRSEFYREGRVPLQ 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
TLRA IDYG A+T YG G+KV++ D A +
Sbjct: 181 TLRALIDYGFFEAKTTYGRIGVKVWIYKGDMTEREFEEQQAQQ 223
>gi|300174025|ref|YP_003773191.1| 30S ribosomal protein S3 [Leuconostoc gasicomitatum LMG 18811]
gi|299888404|emb|CBL92372.1| 30S ribosomal protein S3 [Leuconostoc gasicomitatum LMG 18811]
Length = 223
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 103/223 (46%), Positives = 152/223 (68%), Gaps = 8/223 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FR+GV W+++WFA ++Y LHEDL+IR+Y++ +L A V +I IER+
Sbjct: 1 MGQKINPTGFRVGVIRDWDAKWFADKADYANQLHEDLRIRKYIEKNLADAAVDRIEIERS 60
Query: 61 HK-NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-------SEIHLSVNEVPKPEIN 112
K + V++A+PG++IGK G+++EK+R +L+ +T+ + +++ E+ KP+++
Sbjct: 61 TKSRVDVSVHTAKPGMVIGKGGSEVEKLRTQLAKLTDVDEKGRSKRVFINIVEIKKPDLS 120
Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172
A L+ Q IA LERRV FRRAM+ A+Q A R GA G+KV+ SGRLNGA+++R E Y EG
Sbjct: 121 AHLVGQQIAGDLERRVAFRRAMRGAIQRATRSGAKGIKVMVSGRLNGADIARIEQYTEGT 180
Query: 173 VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
VPL TLRA IDY A TAYG+ GIK ++ D + ++
Sbjct: 181 VPLHTLRADIDYSWDEAMTAYGNLGIKTWIYRGDILPQKKNSK 223
>gi|229825315|ref|ZP_04451384.1| hypothetical protein GCWU000182_00669 [Abiotrophia defectiva ATCC
49176]
gi|229790687|gb|EEP26801.1| hypothetical protein GCWU000182_00669 [Abiotrophia defectiva ATCC
49176]
Length = 220
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 95/221 (42%), Positives = 144/221 (65%), Gaps = 1/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV W+S+W+A G ++ L ED KIRE+L+ L AGV I IERT
Sbjct: 1 MGQKVNPHGIRVGVIKDWSSKWYA-GKDFADFLVEDYKIREFLKKKLYDAGVGNIDIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+IV +++PG++IGK G D+++++ ++ ++ ++ L V E+ K ++NA L+A+ I
Sbjct: 60 SDRVIVIVSTSQPGIVIGKGGADVDRLKVEVQKLSKQKVDLKVKEIKKADLNAQLVAEKI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+ LE R+ FRRAMK A+ M+ GA G+K SGRL GA+++RTE Y EG +PLQTLRA
Sbjct: 120 AKDLEARISFRRAMKSAMGRTMKNGAKGIKTSVSGRLGGADMARTEFYSEGTIPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
I+YG A A+T YG G+K ++ L + + + +
Sbjct: 180 DIEYGFAEADTTYGKVGVKCWIYLGEVLPTKGNNKKEGSDK 220
>gi|86605860|ref|YP_474623.1| 30S ribosomal protein S3 [Synechococcus sp. JA-3-3Ab]
gi|123738117|sp|Q2JV87|RS3_SYNJA RecName: Full=30S ribosomal protein S3
gi|86554402|gb|ABC99360.1| ribosomal protein S3 [Synechococcus sp. JA-3-3Ab]
Length = 248
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 95/225 (42%), Positives = 136/225 (60%), Gaps = 6/225 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRLGV SRWFA + Y ALL ED IR YL L AG+A I IER
Sbjct: 1 MGQKIHPTGFRLGVIKEHRSRWFADPARYPALLREDDLIRAYLTKQLSSAGLADIQIERK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN------MTNSEIHLSVNEVPKPEINAT 114
+ + +ARPG+++G+ G+ ++ +R+ L I ++V EV + + A
Sbjct: 61 ADQIDLEIRAARPGVVVGRGGSGLDALRQGLQKELSSHGSPERTIRINVVEVTRADAEAV 120
Query: 115 LIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVP 174
L+A++IAQQLERR+ FRR +++ +Q A R G G+K+ +GRLNGAE++RTE EGR+P
Sbjct: 121 LLAENIAQQLERRIAFRRIVRQVIQRAQRAGVQGIKIQIAGRLNGAEIARTEWTREGRIP 180
Query: 175 LQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
L TLRA IDY +A+T +G G+KV+V + + +
Sbjct: 181 LHTLRADIDYADHIAQTTFGVIGVKVWVFKGEVLPGQERPEQKVP 225
>gi|269302425|gb|ACZ32525.1| ribosomal protein S3 [Chlamydophila pneumoniae LPCoLN]
Length = 223
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 102/206 (49%), Positives = 141/206 (68%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK PI FR GV W S W+ E+G L ED++IRE+L+ G A ++ R
Sbjct: 1 MGQKGCPIGFRTGVTKKWRSLWYGNKQEFGKFLIEDVRIREFLRKKPSCQGAAGFVVRRM 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ + +ARPGL+IGKKG +++ ++++L +T E+ L + E+ +PE+NA L+A +I
Sbjct: 61 SGKIEVTIQTARPGLVIGKKGAEVDLLKEELRALTGKEVWLEIAEIKRPELNAKLVADNI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+ERRV FRRAMK+A+QS M GA GVK+ SGRL GAE++R+E Y GRVPL TLRA
Sbjct: 121 ARQIERRVSFRRAMKKAMQSVMDAGAVGVKIQVSGRLAGAEIARSEWYKNGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRD 206
IDY TA AET YG GIKV+++L +
Sbjct: 181 DIDYATACAETTYGIIGIKVWINLGE 206
>gi|313206389|ref|YP_004045566.1| SSU ribosomal protein s3p [Riemerella anatipestifer DSM 15868]
gi|312445705|gb|ADQ82060.1| SSU ribosomal protein S3P [Riemerella anatipestifer DSM 15868]
gi|315023670|gb|EFT36674.1| 30S ribosomal protein S3 [Riemerella anatipestifer RA-YM]
gi|325336166|gb|ADZ12440.1| Ribosomal protein S3 [Riemerella anatipestifer RA-GD]
Length = 231
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 96/223 (43%), Positives = 150/223 (67%), Gaps = 1/223 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ W+S WF G++YG + ED KIR YL+ L + G+++I I+RT
Sbjct: 1 MGQKTNPIGNRLGIIRGWDSNWF-GGNDYGDRIAEDYKIRRYLEARLSKGGISRIYIDRT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + + +ARPGLIIGK G +++K++++L +T ++ +++ E+ +PE++A L+A S+
Sbjct: 60 LKLVTVTITTARPGLIIGKGGQEVDKLKEELKKLTGKDVQINIFEIKRPELDAVLVADSV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E R+ +RRA+K A+ AMR GA+G+K+ SGRLNGAE++R+E + EGR+PL T RA
Sbjct: 120 AKQIENRISYRRAVKMAIAGAMRMGAEGIKIQISGRLNGAEMARSESFKEGRIPLSTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223
IDY A A T YG G+KV++ + + + +
Sbjct: 180 DIDYHIAEAHTTYGRLGVKVWIMKGEVYGKRELSPLVGTQKKS 222
>gi|91216904|ref|ZP_01253868.1| putative 30S ribosomal protein S3 [Psychroflexus torquis ATCC
700755]
gi|91185065|gb|EAS71444.1| putative 30S ribosomal protein S3 [Psychroflexus torquis ATCC
700755]
Length = 236
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 98/216 (45%), Positives = 149/216 (68%), Gaps = 2/216 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ W S W+ G++YG L ED KIR+Y+ L +A V++++IERT
Sbjct: 1 MGQKTNPIGNRLGIIKGWESNWY-GGNDYGDNLAEDHKIRKYIHARLTKASVSRVIIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + + +ARPG+IIGK G +++K++++L N+T+ E+ +++ E+ +PE++A L+A S+
Sbjct: 60 LKLVTVTITTARPGIIIGKGGQEVDKLKEELKNITDKEVQVNIFEIKRPELDAFLVATSV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E R+ +RRA K A+ +A+R A+G+K+ SGRLNGAE++R E Y EGR+PL T RA
Sbjct: 120 ARQVENRISYRRATKMAIAAAIRMNAEGIKIQVSGRLNGAEMARVETYKEGRIPLSTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
IDY + T YG GIKV++ + EV P
Sbjct: 180 DIDYALVESHTTYGRLGIKVWIM-KGEVYGKRELSP 214
>gi|254442541|ref|ZP_05056017.1| ribosomal protein S3 [Verrucomicrobiae bacterium DG1235]
gi|198256849|gb|EDY81157.1| ribosomal protein S3 [Verrucomicrobiae bacterium DG1235]
Length = 207
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 112/206 (54%), Positives = 147/206 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +PI FRL VN W SRWFAR +E+ + L+ED IRE L LK A V +I IER
Sbjct: 1 MGQKTHPIGFRLAVNRNWQSRWFARKNEFASTLYEDHIIREKLMEKLKFASVPRIFIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG+KG +IEKI+ +LS T EI L + EV KPE++ATL+A+++
Sbjct: 61 SSRVRVKIFTARPGIVIGRKGQEIEKIKDELSKATGKEILLDIQEVKKPELDATLVAENV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR+ FRRAMK+AVQ AM GA+G+K+ GRL GA+++RTE +G VPL TLR
Sbjct: 121 ALQLERRIAFRRAMKKAVQMAMSLGANGIKIQVGGRLGGADIARTEVQRQGSVPLHTLRE 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRD 206
IDYGTA A T YG GIK +V ++
Sbjct: 181 EIDYGTAEARTVYGIIGIKCWVFNKE 206
>gi|195952649|ref|YP_002120939.1| ribosomal protein S3 [Hydrogenobaculum sp. Y04AAS1]
gi|226697721|sp|B4U750|RS3_HYDS0 RecName: Full=30S ribosomal protein S3
gi|195932261|gb|ACG56961.1| ribosomal protein S3 [Hydrogenobaculum sp. Y04AAS1]
Length = 231
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 102/222 (45%), Positives = 148/222 (66%), Gaps = 1/222 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +PI FR+GV W S+W EY LHED+ IR+Y++ K AG++K+ IER+
Sbjct: 1 MGQKTHPIGFRIGVTKDWLSKWCTSKKEYPNTLHEDIVIRKYIKERYKSAGISKVTIERS 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-TNSEIHLSVNEVPKPEINATLIAQS 119
+ R+ + S++PG+IIG+KG ++++++ L + N +I LSV+EV P+++A L+A+
Sbjct: 61 GEKIRVRILSSKPGIIIGRKGAEVDQLKNDLERIVKNKDISLSVDEVRVPQLDAQLVAED 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA Q+ERRV RRAMKRA+ +A++ GA G+KV GR+ GA+L+R E +L GR+PLQTLR
Sbjct: 121 IALQIERRVSHRRAMKRAIDNAIKSGAKGIKVQVKGRIGGADLARAEWFLVGRMPLQTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
A IDYG A A T YG GIKV++ D + I
Sbjct: 181 ADIDYGYATAYTKYGILGIKVWIYKGDILKGGKEEIMKKIEE 222
>gi|306821614|ref|ZP_07455212.1| 30S ribosomal protein S3 [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304550359|gb|EFM38352.1| 30S ribosomal protein S3 [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 267
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 94/213 (44%), Positives = 142/213 (66%), Gaps = 1/213 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+G+N W+SRWFA + + ED K+R +L+ L QA ++K+ IER
Sbjct: 1 MGQKVSPHGLRVGINKNWDSRWFAGKDKIAEYIKEDHKVRVFLKKELAQADLSKVEIERV 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ +++A+PG++IGK G IE+++ + +T +++++ EV P+ +A L+A I
Sbjct: 61 GDKLKLNIFTAKPGMVIGKGGQGIEELKSSVEKLTGRNVYVNIEEVKNPDADAMLVAAKI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMR-FGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
AQ LERR+ FRRAMK+A+ M+ G G+KV SGRL GAE++RTE Y EG VPL TLR
Sbjct: 121 AQSLERRIAFRRAMKQAMSRTMKTRGVKGIKVATSGRLGGAEMARTEGYAEGVVPLHTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
A IDYG A A+T YG G+KV++ + + D +
Sbjct: 181 ADIDYGFAEADTTYGKLGVKVWICKGEILRDRN 213
>gi|150008978|ref|YP_001303721.1| 30S ribosomal protein S3 [Parabacteroides distasonis ATCC 8503]
gi|255014809|ref|ZP_05286935.1| 30S ribosomal protein S3 [Bacteroides sp. 2_1_7]
gi|256841021|ref|ZP_05546528.1| ribosomal protein S3 [Parabacteroides sp. D13]
gi|298375789|ref|ZP_06985745.1| ribosomal protein S3 [Bacteroides sp. 3_1_19]
gi|301312027|ref|ZP_07217949.1| ribosomal protein S3 [Bacteroides sp. 20_3]
gi|189045025|sp|A6LEI5|RS3_PARD8 RecName: Full=30S ribosomal protein S3
gi|149937402|gb|ABR44099.1| 30S ribosomal protein S3 [Parabacteroides distasonis ATCC 8503]
gi|256736864|gb|EEU50191.1| ribosomal protein S3 [Parabacteroides sp. D13]
gi|298266826|gb|EFI08483.1| ribosomal protein S3 [Bacteroides sp. 3_1_19]
gi|300830129|gb|EFK60777.1| ribosomal protein S3 [Bacteroides sp. 20_3]
Length = 244
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 101/212 (47%), Positives = 148/212 (69%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ W+S W+ G YG L ED KIR+YL L +A V++I+IERT
Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWY-GGKNYGDTLLEDSKIRKYLNARLAKASVSRIVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I V ++RPG+IIGK G +++K++++L +T+ E+ +++ EV +PE++A ++A +I
Sbjct: 60 LKLITITVCTSRPGIIIGKGGQEVDKLKEELKKITDKEVQINIFEVKRPELDAVIVANNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE ++ +RRA+K A+ S MR GA+G+K+ SGRLNGAE++R+E Y EGR PL TLRA
Sbjct: 120 ARQLEGKIAYRRAVKMAIASTMRMGAEGIKIQISGRLNGAEMARSEMYKEGRTPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
IDY A A T G G+KV++ + D
Sbjct: 180 DIDYALAEALTKVGLLGVKVWICRGEVYGKRD 211
>gi|116617335|ref|YP_817706.1| SSU ribosomal protein S3P [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|227431335|ref|ZP_03913388.1| ribosomal protein S3 [Leuconostoc mesenteroides subsp. cremoris
ATCC 19254]
gi|122272464|sp|Q03ZN9|RS3_LEUMM RecName: Full=30S ribosomal protein S3
gi|116096182|gb|ABJ61333.1| SSU ribosomal protein S3P [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|227352928|gb|EEJ43101.1| ribosomal protein S3 [Leuconostoc mesenteroides subsp. cremoris
ATCC 19254]
Length = 223
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 103/223 (46%), Positives = 151/223 (67%), Gaps = 8/223 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FR+GV W+++WFA ++Y LHEDL+IR+Y++ +L A V +I IERT
Sbjct: 1 MGQKINPTGFRVGVIRDWDAKWFADKADYANQLHEDLRIRKYIEKNLADASVDRIEIERT 60
Query: 61 HK-NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-------SEIHLSVNEVPKPEIN 112
K + + +A+PG++IGK G+++EK+R +L+ +T+ + +++ E+ KP+++
Sbjct: 61 TKSRVDVSIQTAKPGMVIGKGGSEVEKLRTQLAKLTDTDEKGRSKRVFINIVEIKKPDLS 120
Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172
A L+ Q IA LERRV FRRAM+ A+Q A R GA G+KV+ SGRLNGA+++R E Y EG
Sbjct: 121 AHLVGQQIAGDLERRVAFRRAMRGAIQRATRSGAKGIKVMVSGRLNGADIARIEQYTEGT 180
Query: 173 VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
VPL TLRA IDY A TAYG+ GIK ++ D + ++
Sbjct: 181 VPLHTLRADIDYSWDEAMTAYGNLGIKTWIYRGDVLPQKKNSK 223
>gi|262383868|ref|ZP_06077004.1| 30S ribosomal protein S3 [Bacteroides sp. 2_1_33B]
gi|262294766|gb|EEY82698.1| 30S ribosomal protein S3 [Bacteroides sp. 2_1_33B]
Length = 244
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 101/212 (47%), Positives = 148/212 (69%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ W+S W+ G YG L ED KIR+YL L +A V++I+IERT
Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWY-GGKNYGDTLLEDSKIRKYLNARLAKASVSRIVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I V ++RPG+IIGK G +++K++++L +T+ E+ +++ EV +PE++A ++A +I
Sbjct: 60 LKLITITVCTSRPGIIIGKGGQEVDKLKEELKKITDKEVQINIFEVKRPELDAVIVANNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE ++ +RRA+K A+ S MR GA+G+K+ SGRLNGAE++R+E Y EGR PL TLRA
Sbjct: 120 ARQLEGKIAYRRAVKMAIASTMRMGAEGIKIQISGRLNGAEMARSEMYKEGRTPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
IDY A A T G G+KV++ + D
Sbjct: 180 DIDYALAEALTKVGLLGVKVWICRGEVYGKRD 211
>gi|325972655|ref|YP_004248846.1| ribosomal protein S3 [Spirochaeta sp. Buddy]
gi|324027893|gb|ADY14652.1| ribosomal protein S3 [Spirochaeta sp. Buddy]
Length = 235
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 96/209 (45%), Positives = 139/209 (66%), Gaps = 2/209 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--HLKQAGVAKILIE 58
MGQK+NPI RLGVN TW S+W+ EY LHEDLK+R+ L ++ A ++ + I
Sbjct: 1 MGQKVNPIGLRLGVNKTWKSKWYVDPREYAETLHEDLKLRKALIECPEVQGAEISDVEII 60
Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118
R + I++ ++RPG+IIG KG ++EK+ +L ++N ++ + + E+ KPE +A LIA
Sbjct: 61 RKPQRITIVITTSRPGIIIGSKGANVEKLGARLQKLSNKKVQIKIKEIKKPEADAQLIAM 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
++A+QL R FRRAMK AV A++ GA GVK+ SGR+ GAE++R+E EGRVPL TL
Sbjct: 121 NVAKQLVSRGSFRRAMKTAVSKAIQSGAQGVKIRLSGRIGGAEIARSEWMKEGRVPLHTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
R+ IDYG A T +G G+KV+V +
Sbjct: 181 RSDIDYGFTTANTTFGVIGVKVWVFNGEI 209
>gi|261338273|ref|ZP_05966157.1| ribosomal protein S3 [Bifidobacterium gallicum DSM 20093]
gi|270276928|gb|EFA22782.1| ribosomal protein S3 [Bifidobacterium gallicum DSM 20093]
Length = 271
Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats.
Identities = 102/210 (48%), Positives = 147/210 (70%), Gaps = 4/210 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE----YGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQKINP +RLG+ S+WF+ ++ Y + ED KIR+ + L++AGV++I+
Sbjct: 1 MGQKINPFGYRLGITEDHRSKWFSDSNKPGERYRDFVLEDDKIRKAMSKDLERAGVSRII 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + E++R KL +T ++ L++ EV P ++A L+
Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEAERVRAKLEKLTGKQVQLNIYEVKNPALDAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ IA+QL RV FRRAM++A Q AMR GA G+++ SGRL GAE+SR+E Y EGRVPLQ
Sbjct: 121 AQGIAEQLTNRVTFRRAMRKAQQDAMRAGAKGIRIKLSGRLGGAEMSRSEFYREGRVPLQ 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
TLRA IDYG A+T YG G+KV++ D
Sbjct: 181 TLRALIDYGFFEAKTTYGRIGVKVWIYKGD 210
>gi|330814193|ref|YP_004358432.1| SSU ribosomal protein S3p (S3e) [Candidatus Pelagibacter sp.
IMCC9063]
gi|327487288|gb|AEA81693.1| SSU ribosomal protein S3p (S3e) [Candidatus Pelagibacter sp.
IMCC9063]
Length = 226
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 110/225 (48%), Positives = 155/225 (68%), Gaps = 1/225 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RL +N W+S WFA+ YG L +D KIR+Y+ ++K +G+++ILIER
Sbjct: 1 MGQKINPIGIRLKINRNWDSIWFAKKEAYGTYLIQDFKIRKYINANIKNSGISRILIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K C + ++++RPG +IGKKG+DIEKI+ + + E+ +++ E+ KPE++A L+A++I
Sbjct: 61 SKKCNVTIFTSRPGFVIGKKGSDIEKIKSNIGKIVTDEVSVNIKEIRKPELDAYLVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQ+E+R+ +R+AMKRA+QS MR GA G+KV+ SGRL G E++RTE EG VPL TLRA
Sbjct: 121 AQQIEKRIAYRKAMKRAMQSTMRIGAKGIKVMISGRLAGNEIARTEWLREGSVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY A T YG GIKVY+ + V D A + EK
Sbjct: 181 EIDYAECEALTTYGIIGIKVYIY-KGVVFQKDLQKKIASEKEEEK 224
>gi|149199510|ref|ZP_01876545.1| 30S ribosomal protein S3 [Lentisphaera araneosa HTCC2155]
gi|149137445|gb|EDM25863.1| 30S ribosomal protein S3 [Lentisphaera araneosa HTCC2155]
Length = 232
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 104/206 (50%), Positives = 145/206 (70%), Gaps = 1/206 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ FR+G W SRWFA E+ L ED++IR+ ++ K+ V++I IER
Sbjct: 1 MGQKVNPVGFRIGYTKDWRSRWFASKKEFAGKLAEDIEIRKLIKGRFKEFAVSRINIERF 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-TNSEIHLSVNEVPKPEINATLIAQS 119
RI +++ARPGL+IG KG IE+++ +L+ + E+ L V EV PE++A L+A+S
Sbjct: 61 ANRVRIAIHTARPGLVIGSKGAQIEEVKSELAKLAKGKEVFLDVVEVRNPEVDAVLVAES 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IAQQLERRV +RRAMK+++Q AM GADG+KV GRL+GA+++R E Y EGRVPLQT+
Sbjct: 121 IAQQLERRVSYRRAMKKSIQVAMDMGADGIKVKCGGRLSGADIARNEVYSEGRVPLQTIS 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLR 205
A+IDYG A A T YG G+KV++
Sbjct: 181 ANIDYGFAEANTTYGIIGVKVWICKP 206
>gi|170017937|ref|YP_001728856.1| ribosomal protein S3 [Leuconostoc citreum KM20]
gi|226697727|sp|B1MW08|RS3_LEUCK RecName: Full=30S ribosomal protein S3
gi|169804794|gb|ACA83412.1| Ribosomal protein S3 [Leuconostoc citreum KM20]
Length = 223
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 103/223 (46%), Positives = 152/223 (68%), Gaps = 8/223 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FR+GV W+++WFA ++Y LHEDL+IR+Y++ +L A V +I IER+
Sbjct: 1 MGQKINPTGFRVGVIRDWDAKWFADKADYANQLHEDLRIRKYIEKNLADAAVDRIEIERS 60
Query: 61 HK-NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-------SEIHLSVNEVPKPEIN 112
K + V++A+PG++IGK G+++EK+R +L+ +T+ + +++ E+ KP+++
Sbjct: 61 TKSRVDVSVHTAKPGMVIGKGGSEVEKLRTQLAKLTDRDEKGRSKRVFINIVEIKKPDLS 120
Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172
A L+ Q IA LERRV FRRAM+ A+Q A R GA G+KV+ SGRLNGA+++R E Y EG
Sbjct: 121 AHLVGQQIAGDLERRVAFRRAMRGAIQRATRSGAKGIKVMVSGRLNGADIARIEQYTEGT 180
Query: 173 VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
VPL TLRA IDY A TAYG+ GIK ++ D + ++
Sbjct: 181 VPLHTLRADIDYSWDEAMTAYGNLGIKTWIYRGDILPQKKNSK 223
>gi|213693082|ref|YP_002323668.1| ribosomal protein S3 [Bifidobacterium longum subsp. infantis ATCC
15697]
gi|254764513|sp|B7GND4|RS3_BIFLI RecName: Full=30S ribosomal protein S3
gi|213524543|gb|ACJ53290.1| ribosomal protein S3 [Bifidobacterium longum subsp. infantis ATCC
15697]
gi|320459260|dbj|BAJ69881.1| 30S ribosomal protein S3 [Bifidobacterium longum subsp. infantis
ATCC 15697]
Length = 267
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 101/224 (45%), Positives = 149/224 (66%), Gaps = 4/224 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE----YGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQKINP +RLG+ S+WF+ ++ Y + ED +IR+ + L++AGV++I+
Sbjct: 1 MGQKINPFGYRLGITENHRSKWFSDSNKAGERYRDFVLEDDQIRKEMSKDLERAGVSRIV 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + E++R KL +T ++ L++ EV ++A L+
Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEAERVRAKLEKLTGKQVQLNIFEVKNAALDAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ IA+QL RV FRRAM++A Q AMR GA G+++ SGRL GAE+SR+E Y EGRVPLQ
Sbjct: 121 AQGIAEQLTNRVTFRRAMRKAQQDAMRAGAKGIRIKLSGRLGGAEISRSEFYREGRVPLQ 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
TLRA IDYG A+T YG G+KV++ D A ++
Sbjct: 181 TLRALIDYGFFEAKTTYGRIGVKVWIYKGDMTESEFEEQQAQQN 224
>gi|167749433|ref|ZP_02421560.1| hypothetical protein EUBSIR_00387 [Eubacterium siraeum DSM 15702]
gi|167657605|gb|EDS01735.1| hypothetical protein EUBSIR_00387 [Eubacterium siraeum DSM 15702]
gi|291532099|emb|CBK97684.1| SSU ribosomal protein S3P [Eubacterium siraeum 70/3]
gi|291558160|emb|CBL35277.1| SSU ribosomal protein S3P [Eubacterium siraeum V10Sc8a]
Length = 260
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 101/237 (42%), Positives = 147/237 (62%), Gaps = 17/237 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLK------------ 48
MGQK+NP R+GV W+SRWFA + +G L ED KIR+Y+
Sbjct: 1 MGQKVNPHGLRVGVIKDWDSRWFAGKATFGDTLVEDYKIRDYIMNKRMLTRANGEKSDQQ 60
Query: 49 ---QAGVAKILIERTHKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSV 103
AG+A++ IER+ N +I + +A+PG++IG KG +IEK+R ++S + +++L++
Sbjct: 61 LSRAAGIAQVEIERSSDNKIKIHILTAKPGMLIGAKGAEIEKLRAEISKIAGGKDVNLNI 120
Query: 104 NEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELS 163
EV P++NA L+A++IA QLE+RV FRRAMK + M+ GA G+K + SGRL GAE++
Sbjct: 121 VEVKNPDMNAKLVAENIAMQLEQRVSFRRAMKSCIGRTMKSGAKGIKTMVSGRLGGAEIA 180
Query: 164 RTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
R+E Y EG +PLQTLRA IDYG A A T YG G+KV++ + + E
Sbjct: 181 RSENYHEGTIPLQTLRADIDYGVARANTTYGVIGVKVWIYKGEVLKGEIPAQRTTEK 237
>gi|322436540|ref|YP_004218752.1| ribosomal protein S3 [Acidobacterium sp. MP5ACTX9]
gi|321164267|gb|ADW69972.1| ribosomal protein S3 [Acidobacterium sp. MP5ACTX9]
Length = 228
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 103/207 (49%), Positives = 147/207 (71%), Gaps = 1/207 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG+N W SRWF Y LL ED+K++ L+ LK AGV+ + +ER
Sbjct: 1 MGQKVHPYGFRLGINKPWKSRWFVE-RGYDKLLVEDVKLKAELREKLKAAGVSSVEVERP 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+I+ +ARPG+IIG+KG +I+K++ + T+ E+ + + EV KPE++A L++++I
Sbjct: 60 GNKLRLIIRTARPGIIIGRKGAEIDKLKADIQKRTSREVFIDILEVNKPELDAQLVSENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV FRRAM+++V SA+RFG G+KV SGRLNG E++R+E YL+GR+PL TLRA
Sbjct: 120 ALQLEKRVSFRRAMRKSVDSALRFGCKGIKVRVSGRLNGNEIARSEWYLQGRLPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207
IDYG + A T YG G+K +V D
Sbjct: 180 DIDYGFSEAHTTYGIIGVKTWVYRGDI 206
>gi|296111435|ref|YP_003621817.1| 30S ribosomal protein S3 [Leuconostoc kimchii IMSNU 11154]
gi|295832967|gb|ADG40848.1| 30S ribosomal protein S3 [Leuconostoc kimchii IMSNU 11154]
Length = 223
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 102/223 (45%), Positives = 151/223 (67%), Gaps = 8/223 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FR+GV W+++WFA ++Y LHEDL+IR+Y++ +L A V +I IER+
Sbjct: 1 MGQKINPTGFRVGVIRDWDAKWFADKADYANQLHEDLRIRKYIEKNLADAAVDRIEIERS 60
Query: 61 HK-NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-------SEIHLSVNEVPKPEIN 112
K + V++A+PG++IGK G+++EK+R +L+ +T+ + +++ E+ KP+++
Sbjct: 61 TKSRVDVSVHTAKPGMVIGKGGSEVEKLRTQLAKLTDTDEKGRSKRVFINIVEIKKPDLS 120
Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172
A L+ Q IA LERRV FRRAM+ A+Q R GA G+KV+ SGRLNGA+++R E Y EG
Sbjct: 121 AHLVGQQIAGDLERRVAFRRAMRGAIQRTTRSGAKGIKVMVSGRLNGADIARIEQYTEGT 180
Query: 173 VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
VPL TLRA IDY A TAYG+ GIK ++ D + ++
Sbjct: 181 VPLHTLRADIDYSWDEAMTAYGNLGIKTWIYRGDILPQKKNSK 223
>gi|330444119|ref|YP_004377105.1| 30S ribosomal protein S3 [Chlamydophila pecorum E58]
gi|328807229|gb|AEB41402.1| ribosomal protein S3 [Chlamydophila pecorum E58]
Length = 230
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 101/218 (46%), Positives = 144/218 (66%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK PI FR V W S W+ E+G L ED+KIRE+L+ G A ++ R
Sbjct: 1 MGQKGCPIGFRTSVTKKWRSLWYGNKQEFGNFLIEDVKIREFLRKKPSCQGAAGFIVRRM 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ + +ARPGL+IGKKGT+++ ++++L +T E+ + + E+ +PE+NA L+A +I
Sbjct: 61 SGKIEVTIQTARPGLVIGKKGTEVDLLKEELRKLTGKEVWVEIAEIKRPELNAKLVADNI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+ERRV FRRAMK+A+QS M GA GVK+ SGRL GA ++R+E Y GRVPL TLRA
Sbjct: 121 ARQIERRVSFRRAMKKAMQSVMDAGAVGVKIQVSGRLAGAAIARSEWYKNGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
IDY TA AET YG G+KV+++L ++ + + A
Sbjct: 181 DIDYATASAETTYGIIGVKVWINLGEKTASAAPRNEAV 218
>gi|288929334|ref|ZP_06423179.1| ribosomal protein S3 [Prevotella sp. oral taxon 317 str. F0108]
gi|288329436|gb|EFC68022.1| ribosomal protein S3 [Prevotella sp. oral taxon 317 str. F0108]
Length = 244
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 101/223 (45%), Positives = 151/223 (67%), Gaps = 1/223 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ W+S WF G +G + ED+KIR+YL L +A V++I+IERT
Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWF-GGKNFGDNIVEDMKIRKYLNERLAKANVSRIVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I + +ARPG++IGK G D++K++++L + +I +++ EV +P+++AT++A +I
Sbjct: 60 LKLVTITICTARPGIVIGKGGQDVDKLKEELKKLYKKDIQINIFEVKRPDLDATIVANNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E ++ +RRA+K AVQ+ MR GA+G+KV +GRLNGAE++R E Y EGR PL T RA
Sbjct: 120 ARQVEGKIAYRRAIKMAVQNTMRAGAEGIKVQITGRLNGAEMARKEMYKEGRTPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223
IDY A A T G GIKV++ + D D T + +
Sbjct: 180 DIDYCQAEALTKVGLLGIKVWICRGEVYGDRDLTPNFTQDKQS 222
>gi|29839867|ref|NP_828973.1| 30S ribosomal protein S3 [Chlamydophila caviae GPIC]
gi|33301545|sp|Q824P5|RS3_CHLCV RecName: Full=30S ribosomal protein S3
gi|29834214|gb|AAP04851.1| ribosomal protein S3 [Chlamydophila caviae GPIC]
Length = 223
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 100/207 (48%), Positives = 141/207 (68%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK PI FR V W S W+ E+G L ED+KIRE+L+ G A ++ R
Sbjct: 1 MGQKGCPIGFRTAVTKKWRSLWYGNKQEFGKFLIEDVKIREHLRKKPSCQGAAGFIVRRM 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ + +ARPGL+IGKKG +++ ++++L +T E+ + + E+ +PE+NA L+A +I
Sbjct: 61 SGKIEVTIQTARPGLVIGKKGAEVDLLKEELRKLTGKEVWVEIAEIKRPELNAKLVADNI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+ERRV FRRAMK+A+QS M GA GVK+ SGRL GAE++R+E Y GRVPL TLRA
Sbjct: 121 ARQIERRVSFRRAMKKAMQSVMDAGAIGVKIQVSGRLAGAEIARSEWYKNGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207
IDY TA AET YG G+KV+++L ++
Sbjct: 181 DIDYATASAETTYGIIGVKVWINLGEK 207
>gi|223983927|ref|ZP_03634087.1| hypothetical protein HOLDEFILI_01368 [Holdemania filiformis DSM
12042]
gi|223964119|gb|EEF68471.1| hypothetical protein HOLDEFILI_01368 [Holdemania filiformis DSM
12042]
Length = 265
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 101/221 (45%), Positives = 141/221 (63%), Gaps = 2/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+GV W SRW+A +YG LL ED+KIRE+L L A V++I IER+
Sbjct: 1 MGQKVSPIGMRVGVIRDWESRWYAE-KDYGTLLMEDVKIREFLLKELHAAYVSRIEIERS 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT-NSEIHLSVNEVPKPEINATLIAQS 119
II+ +ARPG+IIG G IE ++KKL M +IH+ V EV P+++A L+A++
Sbjct: 60 KNRVEIIIRAARPGVIIGSNGESIEILKKKLQKMCAGKQIHIKVVEVANPDLDAHLVARA 119
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA+QLE+R FR KR +Q MR GA G++ + SGRL GA+++R+E Y EG VPL TLR
Sbjct: 120 IAEQLEQRASFRTCQKRQIQKTMRAGAKGIRTLVSGRLGGADIARSEGYSEGVVPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
+ ID+ A T YG G+KV++ + + P A
Sbjct: 180 SDIDFAIVEAMTTYGKLGVKVWICRGEVLPGQMVQEPEAPK 220
>gi|332182010|gb|AEE17698.1| ribosomal protein S3 [Treponema brennaborense DSM 12168]
Length = 248
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 108/231 (46%), Positives = 150/231 (64%), Gaps = 5/231 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--HLKQAGVAKILIE 58
MGQK+NPI RLGVN TW SRW+A EY L+ EDLKIR+ +Q K A +A+I I
Sbjct: 1 MGQKVNPIGLRLGVNKTWQSRWYADSREYADLVLEDLKIRKMVQDLPECKNADIAEIEIV 60
Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118
R + I++++ARPG+IIG KG +IEKI ++ ++ + + E+ + EINA+LIAQ
Sbjct: 61 RHPQRVTIVIHTARPGVIIGVKGANIEKIGVEIQKHLTKKVQIKIKEIKRAEINASLIAQ 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
++A+QL R FR+A+K+A +AM+ G+ GVK+ SGRL GAE+SRTE + EGRVPL TL
Sbjct: 121 NVARQLMSRGSFRKALKQASGNAMKAGSQGVKIRISGRLGGAEMSRTEEHKEGRVPLHTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE--HRVVEKDS 227
RA IDYG A A T YG G+KV+V + + A + + + S
Sbjct: 181 RADIDYGFAEAHTTYGKIGVKVWVY-NGMMYSHEQNEDAGQLVKKQRRERS 230
>gi|294674765|ref|YP_003575381.1| 30S ribosomal protein S3 [Prevotella ruminicola 23]
gi|294473167|gb|ADE82556.1| ribosomal protein S3 [Prevotella ruminicola 23]
Length = 240
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 103/227 (45%), Positives = 153/227 (67%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ W+S WF G ++G L ED KIR+YL L +A V+KI+IERT
Sbjct: 1 MGQKVNPISNRLGIVRGWDSNWF-GGKDFGDNLVEDQKIRKYLNERLAKASVSKIVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I + +ARPGL+IGK G D++K++++L + + EI +++ EV +PE++AT++A +I
Sbjct: 60 LKLVTITICTARPGLVIGKGGQDVDKLKEELKKLYDKEIQINIFEVKRPELDATIVANNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E ++ +RRA+K A+Q+ MR GA+G+KV SGRLNGAE++R+E EGR PL T RA
Sbjct: 120 ARQVEGKIAYRRAIKMAIQNTMRAGAEGIKVQISGRLNGAEIARSEMLKEGRTPLHTYRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDY A A T G GIKV++ + + D + + + +
Sbjct: 180 DIDYCHAEALTKVGILGIKVWICRGEIYGNVDLAPNFTQEKSNGRSN 226
>gi|300775020|ref|ZP_07084883.1| 30S ribosomal protein S3 [Chryseobacterium gleum ATCC 35910]
gi|300506835|gb|EFK37970.1| 30S ribosomal protein S3 [Chryseobacterium gleum ATCC 35910]
Length = 249
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 100/222 (45%), Positives = 151/222 (68%), Gaps = 1/222 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ W+S WF G++YG + ED KIR YL+ L + G++KI IERT
Sbjct: 1 MGQKTNPIGNRLGIIRGWDSNWF-GGNDYGDRIAEDYKIRRYLEARLSKGGISKIYIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + + +ARPGLIIGK G +++K++++L +T +I +++ E+ +PE++A L+A SI
Sbjct: 60 LKLVTVTITTARPGLIIGKGGQEVDKLKEELKKLTGKDIQINIFEIKRPELDAVLVADSI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
++Q+E R+ +RRA+K A+ S MR GA+G+KV SGRLNGAE++R+E + EGR+PL T RA
Sbjct: 120 SKQIENRISYRRAVKMAMASTMRMGAEGIKVQISGRLNGAEMARSESFKEGRIPLSTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
IDY A A T YG G+KV++ + + + + +
Sbjct: 180 DIDYHWAEAHTTYGRLGVKVWIMKGEVYGKRELSPLVGQQKK 221
>gi|28493515|ref|NP_787676.1| 30S ribosomal protein S3 [Tropheryma whipplei str. Twist]
gi|28572373|ref|NP_789153.1| 30S ribosomal protein S3 [Tropheryma whipplei TW08/27]
gi|61215753|sp|Q83FZ2|RS3_TROWT RecName: Full=30S ribosomal protein S3
gi|61215759|sp|Q83I72|RS3_TROW8 RecName: Full=30S ribosomal protein S3
gi|28410504|emb|CAD66890.1| 30s ribosomal protein S3 [Tropheryma whipplei TW08/27]
gi|28476557|gb|AAO44645.1| 30S ribosomal protein S3 [Tropheryma whipplei str. Twist]
Length = 220
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 98/209 (46%), Positives = 140/209 (66%), Gaps = 4/209 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR----GSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQKINP RLG+ S W++ G Y + ED+KIR YL L +AG+A+I
Sbjct: 1 MGQKINPYGLRLGITTDHVSHWYSDSTRPGQRYADYVSEDIKIRSYLTKTLDRAGIARIE 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +Y+ARPG++IG++G + ++ R +L +T+ ++ L++ EV PE A L+
Sbjct: 61 IERTRDRIRVDIYTARPGIVIGRRGAEADRYRLELEKITSKQVQLNILEVKNPETTARLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ IA+QL RV FRRAM++ +QSA G G+++ +GRL GAE+SR+E Y+EG+VPLQ
Sbjct: 121 AQGIAEQLAARVAFRRAMRKGLQSATSAGVRGIRIRLAGRLGGAEISRSEFYIEGQVPLQ 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
TLRA IDYG A T YG G+KV++ +
Sbjct: 181 TLRASIDYGFYEARTPYGHIGVKVWIYKK 209
>gi|224283715|ref|ZP_03647037.1| 30S ribosomal protein S3 [Bifidobacterium bifidum NCIMB 41171]
gi|310288018|ref|YP_003939277.1| 30S ribosomal protein S3 [Bifidobacterium bifidum S17]
gi|311064891|ref|YP_003971617.1| 30S ribosomal protein S3 RpsC [Bifidobacterium bifidum PRL2010]
gi|313140871|ref|ZP_07803064.1| 30S ribosomal protein S3 [Bifidobacterium bifidum NCIMB 41171]
gi|309251955|gb|ADO53703.1| 30S ribosomal protein S3 [Bifidobacterium bifidum S17]
gi|310867211|gb|ADP36580.1| RpsC 30S ribosomal protein S3 [Bifidobacterium bifidum PRL2010]
gi|313133381|gb|EFR50998.1| 30S ribosomal protein S3 [Bifidobacterium bifidum NCIMB 41171]
Length = 272
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 102/210 (48%), Positives = 147/210 (70%), Gaps = 4/210 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE----YGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQKINP +RLG+ + S+WF+ ++ Y + ED KIR+ + L++AGV++I+
Sbjct: 1 MGQKINPFGYRLGITESHRSKWFSDSNKVGERYSDFVLEDDKIRKVMNKDLERAGVSRIV 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + EK+R KL +T ++ L++ EV ++A L+
Sbjct: 61 IERTRDRVRVDIHAARPGIVIGRRGAEAEKVRAKLEKLTGKQVQLNIFEVKNAALDAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ IA+QL RV FRRAM++A Q AMR GA G+++ SGRL GAE+SR+E Y EGRVPLQ
Sbjct: 121 AQGIAEQLTNRVTFRRAMRKAQQDAMRAGAKGIRIKLSGRLGGAEMSRSEFYREGRVPLQ 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
TLRA IDYG A+T YG G+KV++ D
Sbjct: 181 TLRALIDYGFFEAKTTYGRIGVKVWIYKGD 210
>gi|15836173|ref|NP_300697.1| 30S ribosomal protein S3 [Chlamydophila pneumoniae J138]
gi|16752399|ref|NP_444658.1| 30S ribosomal protein S3 [Chlamydophila pneumoniae AR39]
gi|33241998|ref|NP_876939.1| 30S ribosomal protein S3 [Chlamydophila pneumoniae TW-183]
gi|12644034|sp|Q9Z7R3|RS3_CHLPN RecName: Full=30S ribosomal protein S3
gi|7189040|gb|AAF37989.1| ribosomal protein S3 [Chlamydophila pneumoniae AR39]
gi|8979013|dbj|BAA98848.1| S3 ribosomal protein [Chlamydophila pneumoniae J138]
gi|33236508|gb|AAP98596.1| ribosomal protein S3 [Chlamydophila pneumoniae TW-183]
gi|301051557|gb|ADK54932.1| 30S ribosomal protein S3 [Chlamydophila psittaci]
Length = 223
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 101/206 (49%), Positives = 141/206 (68%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK PI FR GV W S W+ E+G L ED++IR++L+ G A ++ R
Sbjct: 1 MGQKGCPIGFRTGVTKKWRSLWYGNKQEFGKFLIEDVRIRQFLRKKPSCQGAAGFVVRRM 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ + +ARPGL+IGKKG +++ ++++L +T E+ L + E+ +PE+NA L+A +I
Sbjct: 61 SGKIEVTIQTARPGLVIGKKGAEVDLLKEELRALTGKEVWLEIAEIKRPELNAKLVADNI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+ERRV FRRAMK+A+QS M GA GVK+ SGRL GAE++R+E Y GRVPL TLRA
Sbjct: 121 ARQIERRVSFRRAMKKAMQSVMDAGAVGVKIQVSGRLAGAEIARSEWYKNGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRD 206
IDY TA AET YG GIKV+++L +
Sbjct: 181 DIDYATACAETTYGIIGIKVWINLGE 206
>gi|58584593|ref|YP_198166.1| 30S ribosomal protein S3 [Wolbachia endosymbiont strain TRS of
Brugia malayi]
gi|75507982|sp|Q5GSV0|RS3_WOLTR RecName: Full=30S ribosomal protein S3
gi|58418909|gb|AAW70924.1| Ribosomal protein S3 [Wolbachia endosymbiont strain TRS of Brugia
malayi]
Length = 206
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 107/204 (52%), Positives = 147/204 (72%), Gaps = 2/204 (0%)
Query: 1 MGQKINPILFRLGVNCT-WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER 59
MGQK+NPI FRL +N W+S W+A +Y LH+DL IR Y+ K AG++KI+IER
Sbjct: 1 MGQKVNPIGFRLKINNNTWDSVWYAN-KDYKEKLHQDLFIRSYINESFKHAGLSKIIIER 59
Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
+ ++S+RPG+IIGKKG DIEK+++K++ + + ++V + +PEI+A LI+ S
Sbjct: 60 KVDLLSVTIHSSRPGVIIGKKGLDIEKVKQKIAEKVKNSVEVNVVGIKRPEIDAALISSS 119
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IAQQLE+RV FRRAMK+A+QS +R G G+KV SGRL GAE++RTE Y EGR+PL TLR
Sbjct: 120 IAQQLEKRVSFRRAMKKAIQSCLRMGGGGIKVGCSGRLGGAEIARTEWYKEGRLPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVS 203
A+IDY A+T YG G+KV+V
Sbjct: 180 ANIDYAFCEAKTIYGIIGVKVWVY 203
>gi|163847929|ref|YP_001635973.1| 30S ribosomal protein S3 [Chloroflexus aurantiacus J-10-fl]
gi|222525809|ref|YP_002570280.1| 30S ribosomal protein S3 [Chloroflexus sp. Y-400-fl]
gi|189044964|sp|A9WH72|RS3_CHLAA RecName: Full=30S ribosomal protein S3
gi|254764522|sp|B9LJD8|RS3_CHLSY RecName: Full=30S ribosomal protein S3
gi|163669218|gb|ABY35584.1| ribosomal protein S3 [Chloroflexus aurantiacus J-10-fl]
gi|222449688|gb|ACM53954.1| ribosomal protein S3 [Chloroflexus sp. Y-400-fl]
Length = 243
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 101/211 (47%), Positives = 144/211 (68%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG+K++PI FRLG W S+WFA G EY LHED+++R+ + L+ AGV++I IER+
Sbjct: 1 MGRKVHPIGFRLGYIKDWQSKWFAEGEEYTRQLHEDIELRKLISKELQSAGVSRIEIERS 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I VY+A+PG++IGK+GT+++ ++ L T +I L++ E+ +PE++A L+A+SI
Sbjct: 61 ANKIEISVYTAKPGIVIGKRGTNVDTLKSALERKTGKKIKLNIKEIHQPELDAQLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
+Q+ RRV ++RAMK+AVQ AMR GA GVKV SGRL GAE+SR EGRVP TLRA
Sbjct: 121 GEQITRRVSYKRAMKQAVQRAMRLGAQGVKVRCSGRLGGAEMSRVHEEAEGRVPRHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
IDY A T YG G+KV++ + +
Sbjct: 181 DIDYAQVHAHTTYGRIGVKVWIYKGEVFPNQ 211
>gi|303240965|ref|ZP_07327476.1| ribosomal protein S3 [Acetivibrio cellulolyticus CD2]
gi|302591551|gb|EFL61288.1| ribosomal protein S3 [Acetivibrio cellulolyticus CD2]
Length = 222
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 89/209 (42%), Positives = 145/209 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+G+ W+++W+A + L ED KIR++++ L +G+++I IER
Sbjct: 1 MGQKVNPHGLRIGIIKDWDTKWYAGNKNFSDFLVEDFKIRKFIKKKLYTSGISRIEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++ V +A+PGL+IGK G IE++RK+L MT + +++ E+ PE+++ ++A++I
Sbjct: 61 ANKVKVNVNTAKPGLVIGKGGAGIEELRKQLEKMTQKNVLINITEIKVPELDSQIVAENI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+R+ FR+AMK+A+ +M+ GA G+K +GR+ GAE++RTE Y EG +PLQTLRA
Sbjct: 121 ASQLEKRISFRKAMKQAMTRSMKLGAKGIKTQVAGRVGGAEIARTEHYHEGTIPLQTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVS 209
+DYG A A+T YG G+KV++ + +
Sbjct: 181 DVDYGFAEADTTYGKLGVKVWIYKGEVLP 209
>gi|160872272|ref|ZP_02062404.1| ribosomal protein S3 [Rickettsiella grylli]
gi|159121071|gb|EDP46409.1| ribosomal protein S3 [Rickettsiella grylli]
Length = 263
Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 103/209 (49%), Positives = 145/209 (69%), Gaps = 1/209 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARG-SEYGALLHEDLKIREYLQCHLKQAGVAKILIER 59
MG K+NP+ RLG+ T +RW+A+ EY L+ DL R+ ++ L QAGV+ I IER
Sbjct: 1 MGHKVNPVGIRLGITRTSTARWYAKKSREYADNLYYDLSARKLIEKALLQAGVSSIQIER 60
Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
+ +I + A+PG++IGKKG I+++R +L + + LSV EV KPE++A L+A++
Sbjct: 61 AARKSKITISVAKPGVVIGKKGEYIDQLRDQLEKIMRVPVRLSVLEVKKPELDAKLVAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IAQQLERRV+FRRAMKRAVQ+A+R GA G+K+ +GRL GAE++R+E Y EG VPL T R
Sbjct: 121 IAQQLERRVMFRRAMKRAVQTALRLGALGIKITVAGRLGGAEIARSERYQEGSVPLHTFR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEV 208
A IDY A A+T YG G+KV++ +
Sbjct: 181 ADIDYALAEAQTTYGKLGVKVWIYKGEVF 209
>gi|57239330|ref|YP_180466.1| 30S ribosomal protein S3 [Ehrlichia ruminantium str. Welgevonden]
gi|161598452|ref|YP_197508.2| 30S ribosomal protein S3 [Ehrlichia ruminantium str. Welgevonden]
gi|81672785|sp|Q5HAS8|RS3_EHRRW RecName: Full=30S ribosomal protein S3
gi|57161409|emb|CAH58333.1| 30S ribosomal protein S3 [Ehrlichia ruminantium str. Welgevonden]
Length = 211
Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 108/212 (50%), Positives = 151/212 (71%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RL + TW+S W+A +Y LHED +R++++ A ++K++I R
Sbjct: 1 MGQKSNPIGLRLKIINTWDSLWYAN-KDYTTKLHEDFLLRKFIKKAFYHASISKVVIARK 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ VYSA+PG+IIGKKG DI+K+++K+ M N+ I L++ EV KPE+ A LIA++I
Sbjct: 60 VDVIMVNVYSAKPGVIIGKKGADIDKVKQKIVKMINNNIELNIIEVKKPELKAILIAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKR+VQ+ ++ GA G+KV +GRL GAE++RTE Y EG VPL T RA
Sbjct: 120 AQQLERRVSFRRAMKRSVQNCLKIGAKGIKVSCAGRLGGAEIARTEWYKEGSVPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
+IDYG + A+T YG G+KV+V L + S ++
Sbjct: 180 NIDYGFSEAKTIYGIIGVKVWVYLGETKSSNE 211
>gi|254412256|ref|ZP_05026031.1| ribosomal protein S3 [Microcoleus chthonoplastes PCC 7420]
gi|196181222|gb|EDX76211.1| ribosomal protein S3 [Microcoleus chthonoplastes PCC 7420]
Length = 241
Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 100/224 (44%), Positives = 143/224 (63%), Gaps = 2/224 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+PI FRLG+ S WFA Y +L ED IR+Y++ +L AG++ I IER
Sbjct: 1 MGQKIHPIGFRLGITQEHRSCWFADTKRYPEVLQEDYIIRQYVEKNLSNAGISMIRIERK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLIAQ 118
+ V++ARPG+++G+ G+ IE +R L ++ +N +I ++V EV + + +A LIA+
Sbjct: 61 ADQIDLEVHTARPGVVVGRGGSGIESLRTGLQDLLGSNRQIRINVIEVARVDADAELIAE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
IAQQLERRV FRR +++A+Q A R G+KV SGRLNGAE++RTE EGRVPL TL
Sbjct: 121 YIAQQLERRVSFRRVVRQAIQRAQRADVQGIKVQVSGRLNGAEIARTEWTREGRVPLHTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
RA IDY A T YG G+KV++ + + ++ P +
Sbjct: 181 RADIDYSYRTASTTYGILGVKVWIFKGEIIPSTEDVAPPPTAQP 224
>gi|294790417|ref|ZP_06755575.1| ribosomal protein S3 [Scardovia inopinata F0304]
gi|294458314|gb|EFG26667.1| ribosomal protein S3 [Scardovia inopinata F0304]
Length = 272
Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 105/223 (47%), Positives = 150/223 (67%), Gaps = 4/223 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE----YGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQKINP +RLGV + S+WF+ ++ Y + ED KIR+ +Q L++AGV++I+
Sbjct: 1 MGQKINPFGYRLGVTESHRSKWFSDSTKPGERYRDFVLEDDKIRKEMQKDLERAGVSRIV 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + +++R KL +T ++ L++ EV I+A L+
Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRVRAKLEKITGKQVQLNIFEVKNAAIDAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQSIA+QL RV FRRAM++A Q AMR GA G+++ SGRL GAE+SR+E Y EGRVPLQ
Sbjct: 121 AQSIAEQLTNRVTFRRAMRKAQQDAMRAGAQGIRIKLSGRLGGAEMSRSEFYREGRVPLQ 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
TLRA IDYG A T YG G+KV++ D A +
Sbjct: 181 TLRALIDYGFFEARTTYGRIGVKVWIYKGDMTERQFEEQQAQQ 223
>gi|161986608|ref|YP_196549.2| 30S ribosomal protein S3 [Ehrlichia ruminantium str. Gardel]
gi|91207655|sp|Q5FFU6|RS3_EHRRG RecName: Full=30S ribosomal protein S3
Length = 211
Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats.
Identities = 109/212 (51%), Positives = 151/212 (71%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RL + TW+S W+A +Y LHED +R++++ A ++K++I R
Sbjct: 1 MGQKSNPIGLRLKIINTWDSLWYAN-KDYTTKLHEDFLLRKFIKKAFYHASISKVVIARK 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ VYSA+PG+IIGKKG DI+K+++K+ M N+ I L++ EV KPE+ A LIA++I
Sbjct: 60 VDVIMVNVYSAKPGVIIGKKGADIDKVKQKIVKMINNNIELNIIEVKKPELKAILIAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKR+VQS ++ GA G+KV +GRL GAE++RTE Y EG VPL T RA
Sbjct: 120 AQQLERRVSFRRAMKRSVQSCLKIGAKGIKVSCAGRLGGAEIARTEWYKEGSVPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
+IDYG + A+T YG G+KV+V L + S ++
Sbjct: 180 NIDYGFSEAKTIYGIIGVKVWVYLGETKSSNE 211
>gi|288801104|ref|ZP_06406560.1| ribosomal protein S3 [Prevotella sp. oral taxon 299 str. F0039]
gi|288332038|gb|EFC70520.1| ribosomal protein S3 [Prevotella sp. oral taxon 299 str. F0039]
Length = 243
Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats.
Identities = 104/222 (46%), Positives = 148/222 (66%), Gaps = 1/222 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ W+S WF G +G L ED KIR YL L +A V+KI+IERT
Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWF-GGKNFGENLVEDQKIRNYLNERLAKASVSKIVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I + +ARPG++IGK G D++K++++L + +I +++ EV KPE++A ++A +I
Sbjct: 60 LKLVTITICTARPGIVIGKGGQDVDKLKEELKKLYKKDIQINIFEVKKPELDANIVANNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E ++ +RRA+K A+QS MR GA+G+KV SGRLNGAE++R E Y EGR PL T RA
Sbjct: 120 ARQVEGKISYRRAIKMAIQSTMRAGAEGIKVQISGRLNGAEMARKEMYKEGRTPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
IDY A A T G GIKV++ + + D T + +
Sbjct: 180 DIDYCQAEALTKVGLLGIKVWICRGEVYGERDLTPNFTQDKQ 221
>gi|154494386|ref|ZP_02033706.1| hypothetical protein PARMER_03741 [Parabacteroides merdae ATCC
43184]
gi|218262281|ref|ZP_03476804.1| hypothetical protein PRABACTJOHN_02478 [Parabacteroides johnsonii
DSM 18315]
gi|154085830|gb|EDN84875.1| hypothetical protein PARMER_03741 [Parabacteroides merdae ATCC
43184]
gi|218223504|gb|EEC96154.1| hypothetical protein PRABACTJOHN_02478 [Parabacteroides johnsonii
DSM 18315]
Length = 244
Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats.
Identities = 98/212 (46%), Positives = 146/212 (68%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ RLG+ W+S W+ YG L ED KIR+YL L +A V++++IERT
Sbjct: 1 MGQKVNPVSNRLGIIRGWDSNWYGGKK-YGDTLLEDSKIRKYLNARLAKASVSRVVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I V ++RPG+IIGK G +++K++++L +T+ E+ +++ EV +PE++A ++A +I
Sbjct: 60 LKLITITVCTSRPGIIIGKGGQEVDKLKEELKKITDKEVQINIFEVKRPELDAVIVANNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE ++ +RRA+K A+ S MR GA+G+KV SGRLNGAE++R+E Y EGR PL T RA
Sbjct: 120 ARQLEGKIAYRRAIKMAIASTMRMGAEGIKVQVSGRLNGAEMARSEMYKEGRTPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
IDY A A T G G+KV++ + D
Sbjct: 180 DIDYALAEALTKVGLIGVKVWICRGEVYGKRD 211
>gi|304384281|ref|ZP_07366692.1| 30S ribosomal protein S3 [Prevotella marshii DSM 16973]
gi|304334597|gb|EFM00879.1| 30S ribosomal protein S3 [Prevotella marshii DSM 16973]
Length = 243
Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats.
Identities = 98/223 (43%), Positives = 148/223 (66%), Gaps = 1/223 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ W+S WF G +G L ED KIR+YL L +A +++I+IERT
Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWF-GGKSFGDNLIEDRKIRKYLNERLAKASLSRIVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I + +ARPG++IGK G D++K++++L + + EI +++ EV KPE++A ++ +I
Sbjct: 60 LKLVTITICTARPGIVIGKGGQDVDKLKEELKKLYDKEIQINIFEVKKPELDANIVGNNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E ++ +RRA+K A+ + MR GA+G+KV +GRLNGAE++R E + EGR PL T RA
Sbjct: 120 ARQVEGKIAYRRAIKMAIANTMRAGAEGIKVQITGRLNGAEMARKEMFKEGRTPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223
IDY A T G GIKV++ + + D T A+ +
Sbjct: 180 DIDYCQTEALTKVGLLGIKVWICRGEVYGECDLTPNFAQEKQS 222
>gi|310779590|ref|YP_003967923.1| SSU ribosomal protein S3P [Ilyobacter polytropus DSM 2926]
gi|309748913|gb|ADO83575.1| SSU ribosomal protein S3P [Ilyobacter polytropus DSM 2926]
Length = 218
Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats.
Identities = 95/214 (44%), Positives = 144/214 (67%), Gaps = 1/214 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ TW+S W+A EY HED+ IRE ++ AGV+KI IERT
Sbjct: 1 MGQKVDPRGLRLGITRTWDSNWYADKKEYAKYFHEDITIREVIKKTYFHAGVSKIRIERT 60
Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
+ + +++A+ G++IG+KG +IE +++KL +T ++ + V E +A L+A++
Sbjct: 61 SPSHVVVFIHTAKAGIVIGRKGAEIESLKRKLEKLTGKKLTIKVQEEKGFNTDAVLVAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA +ERRV ++RA+ +AV AMR G G+K++ASGRLNGAE++R+E +EG+VPL TLR
Sbjct: 121 IATGIERRVAYKRAINQAVMRAMRAGVKGIKIMASGRLNGAEIARSEWVVEGKVPLHTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
A IDY TA A+T YG+ GIKV++ + +
Sbjct: 181 ADIDYATATAQTTYGALGIKVWIFHGEVLPSKKE 214
>gi|88658625|ref|YP_507233.1| 30S ribosomal protein S3 [Ehrlichia chaffeensis str. Arkansas]
gi|123750075|sp|Q2GH50|RS3_EHRCR RecName: Full=30S ribosomal protein S3
gi|88600082|gb|ABD45551.1| ribosomal protein S3 [Ehrlichia chaffeensis str. Arkansas]
Length = 211
Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats.
Identities = 107/212 (50%), Positives = 151/212 (71%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RL + TW+S W+A +Y LHED +R++++ A ++K++I R
Sbjct: 1 MGQKSNPIGLRLKIINTWDSLWYAN-KDYTTKLHEDFLLRKFIKKAFYHASISKVVIARK 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ VYSA+PG+IIGKKG DI+K+++++ M N+ I L++ EV KPE+ A LIA++I
Sbjct: 60 VDVIMVNVYSAKPGVIIGKKGADIDKVKQQIVKMINNNIELNIIEVKKPELKAVLIAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+R+ FRRAMKR+VQS ++ GA G+KV +GRL GAE++RTE Y EG VPL T RA
Sbjct: 120 AQQLEKRISFRRAMKRSVQSCLKIGAKGIKVSCAGRLGGAEIARTEWYKEGSVPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
+IDYG + A+T YG G+KV+V L D S ++
Sbjct: 180 NIDYGFSEAKTIYGIIGVKVWVYLGDTKSSNE 211
>gi|15618551|ref|NP_224837.1| 30S ribosomal protein S3 [Chlamydophila pneumoniae CWL029]
gi|4376939|gb|AAD18780.1| S3 Ribosomal Protein [Chlamydophila pneumoniae CWL029]
Length = 223
Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats.
Identities = 101/206 (49%), Positives = 141/206 (68%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK PI FR GV W S W+ E+G L ED++IR++L+ G A ++ R
Sbjct: 1 MGQKGCPIGFRTGVTKRWRSLWYGNKQEFGKFLIEDVRIRQFLRKKPSCQGAAGFVVRRM 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ + +ARPGL+IGKKG +++ ++++L +T E+ L + E+ +PE+NA L+A +I
Sbjct: 61 SGKIEVTIQTARPGLVIGKKGAEVDLLKEELRALTGKEVWLEIAEIKRPELNAKLVADNI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+ERRV FRRAMK+A+QS M GA GVK+ SGRL GAE++R+E Y GRVPL TLRA
Sbjct: 121 ARQIERRVSFRRAMKKAMQSVMDAGAVGVKIQVSGRLAGAEIARSEWYKNGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRD 206
IDY TA AET YG GIKV+++L +
Sbjct: 181 DIDYATACAETTYGIIGIKVWINLGE 206
>gi|73667222|ref|YP_303238.1| 30S ribosomal protein S3 [Ehrlichia canis str. Jake]
gi|91207654|sp|Q3YRL5|RS3_EHRCJ RecName: Full=30S ribosomal protein S3
gi|72394363|gb|AAZ68640.1| SSU ribosomal protein S3P [Ehrlichia canis str. Jake]
Length = 211
Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats.
Identities = 105/212 (49%), Positives = 151/212 (71%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RL + TW+S W+A +Y LHED +R++++ A ++K++I R
Sbjct: 1 MGQKCNPIGLRLKIINTWDSLWYAN-KDYTTKLHEDFLLRKFIKKAFYHAAISKVVIARK 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ VYSA+PG+IIGKKG DI+K+++++ M N+ I L++ EV KPE+ A LIA++I
Sbjct: 60 VDLIMVNVYSAKPGVIIGKKGADIDKVKQQIVKMINNNIELNIIEVKKPELKAVLIAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+R+ FRRAMKR+VQ+ ++ GA G+KV +GRL GAE++RTE Y EG VPL T RA
Sbjct: 120 AQQLEKRISFRRAMKRSVQNCLKIGAKGIKVSCAGRLGGAEIARTEWYKEGSVPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
+IDYG + A+T YG G+KV+V L + S ++
Sbjct: 180 NIDYGFSEAKTIYGIIGVKVWVYLGETKSSNE 211
>gi|313123117|ref|YP_004033376.1| 30S ribosomal protein s3 [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|312279680|gb|ADQ60399.1| 30S ribosomal protein S3 [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|325684726|gb|EGD26880.1| 30S ribosomal protein S3 [Lactobacillus delbrueckii subsp. lactis
DSM 20072]
Length = 223
Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats.
Identities = 100/225 (44%), Positives = 151/225 (67%), Gaps = 2/225 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KINPI FRLGVN W ++W+A Y L+EDL+IR++L LK A V+ + IER
Sbjct: 1 MGSKINPIGFRLGVNRDWEAKWYA-ARGYKETLNEDLRIRKFLDEKLKDASVSTVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++ARPG++IGK G ++E + K+++ +TN ++H+++ E+ KP+++A L+A I
Sbjct: 60 ANRVNIAIHTARPGMVIGKGGAEVETLNKEINALTNKQVHINIVEIKKPDLDAKLVADGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRA ++A Q +MR GA G+KV +GRLNGA+++R E + EG VPL TLRA
Sbjct: 120 ARQLEARIAFRRASRQAAQRSMRAGAKGIKVQTAGRLNGADIARREWHTEGSVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY A T YG G+KV+++ + + + PA + +K
Sbjct: 180 DIDYAWVNAFTTYGEIGVKVWINRGEILPGRKNQ-PAKRSKGGKK 223
>gi|323344642|ref|ZP_08084866.1| 30S ribosomal protein S3 [Prevotella oralis ATCC 33269]
gi|323093912|gb|EFZ36489.1| 30S ribosomal protein S3 [Prevotella oralis ATCC 33269]
Length = 243
Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats.
Identities = 102/222 (45%), Positives = 152/222 (68%), Gaps = 1/222 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ W+S WF G ++G L ED+KIR+YL L +A V++I+IERT
Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWF-GGKDFGDNLVEDMKIRKYLNERLAKASVSRIVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I + +ARPG++IGK G D++K++++L + +I +++ E+ KPE++AT++A +I
Sbjct: 60 LKLVTITICTARPGIVIGKGGQDVDKLKEELKKLYKKDIQINIFEIKKPELDATIVANNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E ++ +RRA+K A+Q+ MR GA+G+KV +GRLNGAE++R E Y EGR PL T RA
Sbjct: 120 ARQVEGKIAYRRAIKMAIQNTMRTGAEGIKVQITGRLNGAEMARKEMYKEGRTPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
IDY A A T G GIKV++ + D T A+ +
Sbjct: 180 DIDYCQAEALTKVGLLGIKVWICRGEVYGVPDLTPNFAQDKQ 221
>gi|260909756|ref|ZP_05916450.1| 30S ribosomal protein S3 [Prevotella sp. oral taxon 472 str. F0295]
gi|260636181|gb|EEX54177.1| 30S ribosomal protein S3 [Prevotella sp. oral taxon 472 str. F0295]
Length = 244
Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats.
Identities = 99/223 (44%), Positives = 151/223 (67%), Gaps = 1/223 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ W+S WF G +G + ED+KIR+YL L +A V++I+IERT
Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWF-GGKNFGENIVEDMKIRKYLNERLAKANVSRIVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I + +ARPG++IGK G D+++++++L + +I +++ EV +P+++AT++A +I
Sbjct: 60 LKLVTITICTARPGIVIGKGGQDVDRLKEELKKLYKKDIQINIFEVKRPDLDATIVANNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E ++ +RRA+K AVQ+ MR GA+G+KV +GRLNGAE++R E Y EGR PL T RA
Sbjct: 120 ARQVEGKIAYRRAIKMAVQNTMRAGAEGIKVQITGRLNGAEMARKEMYKEGRTPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223
IDY A A T G GIKV++ + + D T + +
Sbjct: 180 DIDYCQAEALTKVGLLGIKVWICRGEVYGERDLTPNFTQDKQS 222
>gi|329962273|ref|ZP_08300279.1| ribosomal protein S3 [Bacteroides fluxus YIT 12057]
gi|328530381|gb|EGF57258.1| ribosomal protein S3 [Bacteroides fluxus YIT 12057]
Length = 243
Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats.
Identities = 100/227 (44%), Positives = 151/227 (66%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ W+S W+ G YG L ED KIR+YL L +A V++I+IERT
Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWY-GGKNYGDSLLEDSKIRKYLNARLVKASVSRIVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I V +ARPG+IIGK G +++K++++L +T+ +I +++ EV +PE++A ++A +I
Sbjct: 60 LKLVTITVCTARPGIIIGKGGQEVDKLKEELKKVTDKDIQINIFEVKRPELDAVIVANNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E ++ +RRA+K A+ + MR GA+G+K+ SGRLNGAE++R+E Y EGR PL T RA
Sbjct: 120 ARQVEGKIAYRRAIKMAIANTMRMGAEGIKIQISGRLNGAEMARSEMYKEGRTPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDY A A T G GIKV++ + + + + + S
Sbjct: 180 DIDYCHAEALTKVGLLGIKVWICRGEVYGKKELAPNFTQSKESGRGS 226
>gi|104773548|ref|YP_618528.1| 30S ribosomal protein S3 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116513545|ref|YP_812451.1| 30S ribosomal protein S3 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|122275685|sp|Q04C09|RS3_LACDB RecName: Full=30S ribosomal protein S3
gi|123378517|sp|Q1GBL2|RS3_LACDA RecName: Full=30S ribosomal protein S3
gi|103422629|emb|CAI97237.1| 30S ribosomal protein S3 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116092860|gb|ABJ58013.1| SSU ribosomal protein S3P [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
Length = 223
Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats.
Identities = 100/225 (44%), Positives = 150/225 (66%), Gaps = 2/225 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KINPI FRLGVN W ++W+A Y L+EDL+IR++L LK A V+ + IER
Sbjct: 1 MGSKINPIGFRLGVNRDWEAKWYA-ARGYKETLNEDLRIRKFLDEKLKDASVSTVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++ARPG++IGK G ++E + K+++ +TN ++H+++ E+ KP++ A L+A I
Sbjct: 60 ANRVNIAIHTARPGMVIGKGGAEVEALNKEINALTNKQVHINIVEIKKPDLEAKLVADGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRA ++A Q +MR GA G+KV +GRLNGA+++R E + EG VPL TLRA
Sbjct: 120 ARQLEARIAFRRASRQAAQRSMRAGAKGIKVQIAGRLNGADIARREWHTEGSVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY A T YG G+KV+++ + + + PA + +K
Sbjct: 180 DIDYAWVNAFTTYGEIGVKVWINRGEILPGRKNQ-PAKRSKGGKK 223
>gi|171741267|ref|ZP_02917074.1| hypothetical protein BIFDEN_00342 [Bifidobacterium dentium ATCC
27678]
gi|283455372|ref|YP_003359936.1| 30S ribosomal protein S3 [Bifidobacterium dentium Bd1]
gi|306823562|ref|ZP_07456937.1| 30S ribosomal protein S3 [Bifidobacterium dentium ATCC 27679]
gi|309802981|ref|ZP_07697082.1| ribosomal protein S3 [Bifidobacterium dentium JCVIHMP022]
gi|171276881|gb|EDT44542.1| hypothetical protein BIFDEN_00342 [Bifidobacterium dentium ATCC
27678]
gi|283102006|gb|ADB09112.1| rpsC 30S ribosomal protein S3 [Bifidobacterium dentium Bd1]
gi|304553269|gb|EFM41181.1| 30S ribosomal protein S3 [Bifidobacterium dentium ATCC 27679]
gi|308220448|gb|EFO76759.1| ribosomal protein S3 [Bifidobacterium dentium JCVIHMP022]
Length = 267
Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats.
Identities = 101/223 (45%), Positives = 147/223 (65%), Gaps = 4/223 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE----YGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQKINP +RLG+ S+WF+ ++ Y + ED IR+ + L++AGV++I+
Sbjct: 1 MGQKINPFGYRLGITENHRSKWFSDSNKAGERYRDFVLEDDAIRKAMSKDLERAGVSRIV 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + E++R KL +T ++ L++ EV ++A L+
Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEAERVRAKLEKLTGKQVQLNIFEVKNAALDAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ IA+QL RV FRRAM++A Q AMR GA G+++ SGRL GAE+SR+E Y EGRVPLQ
Sbjct: 121 AQGIAEQLTNRVTFRRAMRKAQQDAMRAGAKGIRIKLSGRLGGAEMSRSEFYREGRVPLQ 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
TLRA IDYG A+T YG G+KV++ D A +
Sbjct: 181 TLRALIDYGFFEAKTTYGRIGVKVWIYKGDMTEREFEEQQAQQ 223
>gi|229818234|ref|ZP_04448516.1| hypothetical protein BIFANG_03532 [Bifidobacterium angulatum DSM
20098]
gi|229784485|gb|EEP20599.1| hypothetical protein BIFANG_03532 [Bifidobacterium angulatum DSM
20098]
Length = 267
Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats.
Identities = 104/224 (46%), Positives = 149/224 (66%), Gaps = 4/224 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE----YGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQKINP +RLGV S+WF+ ++ Y + ED KIR+ + L++AGV+KI+
Sbjct: 1 MGQKINPFGYRLGVTENHRSKWFSDSNKAGERYRDFVLEDDKIRKEMSKDLERAGVSKIV 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + E++R KL +T ++ L++ EV ++A L+
Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEAERVRAKLEKITGKQVQLNIFEVKNAALDAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ IA+QL RV FRRAM++A Q AMR GA G+++ SGRL GAE+SR+E Y EGRVPLQ
Sbjct: 121 AQGIAEQLTNRVTFRRAMRKAQQDAMRAGAKGIRIKLSGRLGGAEMSRSEFYREGRVPLQ 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
TLRA IDYG A+T YG G+KV++ D A ++
Sbjct: 181 TLRALIDYGFFEAKTTYGRIGVKVWIYKGDMTEREFEEQQAQQN 224
>gi|167764366|ref|ZP_02436491.1| hypothetical protein BACSTE_02750 [Bacteroides stercoris ATCC
43183]
gi|167697771|gb|EDS14350.1| hypothetical protein BACSTE_02750 [Bacteroides stercoris ATCC
43183]
Length = 243
Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats.
Identities = 100/227 (44%), Positives = 151/227 (66%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ W+S W+ G YG L ED KIR+YL L +A V++I+IERT
Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWY-GGKNYGDSLLEDSKIRKYLNARLAKASVSRIVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I V +ARPG+IIGK G +++K++++L +T+ +I +++ EV +PE++A ++A +I
Sbjct: 60 LKLVTITVCTARPGIIIGKGGQEVDKLKEELKKVTDKDIQINIFEVKRPELDAVIVANNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E ++ +RRA+K A+ + MR GA+G+K+ SGRLNGAE++R+E Y EGR PL T RA
Sbjct: 120 ARQVEGKIAYRRAIKMAIANTMRMGAEGIKIQISGRLNGAEMARSEMYKEGRTPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDY A A T G GIKV++ + + + + + S
Sbjct: 180 DIDYCHAEALTKVGLLGIKVWICRGEVYGKRELAPNFTQSKESGRGS 226
>gi|160888392|ref|ZP_02069395.1| hypothetical protein BACUNI_00805 [Bacteroides uniformis ATCC 8492]
gi|218131321|ref|ZP_03460125.1| hypothetical protein BACEGG_02932 [Bacteroides eggerthii DSM 20697]
gi|270294746|ref|ZP_06200947.1| 30S ribosomal protein S3 [Bacteroides sp. D20]
gi|317476350|ref|ZP_07935599.1| ribosomal protein S3 [Bacteroides eggerthii 1_2_48FAA]
gi|317477745|ref|ZP_07936938.1| ribosomal protein S3 [Bacteroides sp. 4_1_36]
gi|319900930|ref|YP_004160658.1| SSU ribosomal protein S3P [Bacteroides helcogenes P 36-108]
gi|329956709|ref|ZP_08297282.1| ribosomal protein S3 [Bacteroides clarus YIT 12056]
gi|156862069|gb|EDO55500.1| hypothetical protein BACUNI_00805 [Bacteroides uniformis ATCC 8492]
gi|217986253|gb|EEC52590.1| hypothetical protein BACEGG_02932 [Bacteroides eggerthii DSM 20697]
gi|270273993|gb|EFA19854.1| 30S ribosomal protein S3 [Bacteroides sp. D20]
gi|316906090|gb|EFV27851.1| ribosomal protein S3 [Bacteroides sp. 4_1_36]
gi|316907376|gb|EFV29081.1| ribosomal protein S3 [Bacteroides eggerthii 1_2_48FAA]
gi|319415961|gb|ADV43072.1| SSU ribosomal protein S3P [Bacteroides helcogenes P 36-108]
gi|328524081|gb|EGF51157.1| ribosomal protein S3 [Bacteroides clarus YIT 12056]
Length = 243
Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats.
Identities = 100/227 (44%), Positives = 151/227 (66%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ W+S W+ G YG L ED KIR+YL L +A V++I+IERT
Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWY-GGKNYGDSLLEDSKIRKYLNARLAKASVSRIVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I V +ARPG+IIGK G +++K++++L +T+ +I +++ EV +PE++A ++A +I
Sbjct: 60 LKLVTITVCTARPGIIIGKGGQEVDKLKEELKKVTDKDIQINIFEVKRPELDAVIVANNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E ++ +RRA+K A+ + MR GA+G+K+ SGRLNGAE++R+E Y EGR PL T RA
Sbjct: 120 ARQVEGKIAYRRAIKMAIANTMRMGAEGIKIQISGRLNGAEMARSEMYKEGRTPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDY A A T G GIKV++ + + + + + S
Sbjct: 180 DIDYCHAEALTKVGLLGIKVWICRGEVYGKKELAPNFTQSKESGRGS 226
>gi|58417922|emb|CAI27126.1| 30S ribosomal protein S3 [Ehrlichia ruminantium str. Welgevonden]
Length = 217
Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats.
Identities = 108/212 (50%), Positives = 151/212 (71%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RL + TW+S W+A +Y LHED +R++++ A ++K++I R
Sbjct: 7 MGQKSNPIGLRLKIINTWDSLWYAN-KDYTTKLHEDFLLRKFIKKAFYHASISKVVIARK 65
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ VYSA+PG+IIGKKG DI+K+++K+ M N+ I L++ EV KPE+ A LIA++I
Sbjct: 66 VDVIMVNVYSAKPGVIIGKKGADIDKVKQKIVKMINNNIELNIIEVKKPELKAILIAENI 125
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKR+VQ+ ++ GA G+KV +GRL GAE++RTE Y EG VPL T RA
Sbjct: 126 AQQLERRVSFRRAMKRSVQNCLKIGAKGIKVSCAGRLGGAEIARTEWYKEGSVPLHTFRA 185
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
+IDYG + A+T YG G+KV+V L + S ++
Sbjct: 186 NIDYGFSEAKTIYGIIGVKVWVYLGETKSSNE 217
>gi|119025345|ref|YP_909190.1| 30S ribosomal protein S3 [Bifidobacterium adolescentis ATCC 15703]
gi|152060848|sp|A1A075|RS3_BIFAA RecName: Full=30S ribosomal protein S3
gi|118764929|dbj|BAF39108.1| 30S ribosomal protein S3 [Bifidobacterium adolescentis ATCC 15703]
Length = 267
Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats.
Identities = 100/223 (44%), Positives = 146/223 (65%), Gaps = 4/223 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE----YGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQKINP +RLG+ S+WF+ ++ Y + ED IR+ + L++AGV++I+
Sbjct: 1 MGQKINPFGYRLGITENHRSKWFSDSNKVGERYRDFVLEDDAIRKAMSKDLERAGVSRIV 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + E++R KL +T ++ L++ EV ++A L+
Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEAERVRAKLEKLTGKQVQLNIFEVKNAALDAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ IA+QL RV FRRAM++A Q AMR GA G+++ SGRL GAE+SR+E Y EG VPLQ
Sbjct: 121 AQGIAEQLTNRVTFRRAMRKAQQDAMRAGAKGIRIKLSGRLGGAEMSRSEFYREGCVPLQ 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
TLRA IDYG A+T YG G+KV++ D A +
Sbjct: 181 TLRALIDYGFFEAKTTYGRIGVKVWIYKGDMTEREFEEQQAQQ 223
>gi|308235490|ref|ZP_07666227.1| 30S ribosomal protein S3 [Gardnerella vaginalis ATCC 14018]
gi|311115161|ref|YP_003986382.1| 30S ribosomal protein S3 [Gardnerella vaginalis ATCC 14019]
gi|310946655|gb|ADP39359.1| 30S ribosomal protein S3 [Gardnerella vaginalis ATCC 14019]
Length = 271
Score = 237 bits (606), Expect = 7e-61, Method: Composition-based stats.
Identities = 104/223 (46%), Positives = 148/223 (66%), Gaps = 4/223 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE----YGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQKINP +RLG+ SRWF+ ++ Y + ED KIR+ + L++AGV++I+
Sbjct: 1 MGQKINPFGYRLGITENHRSRWFSDSTKAGERYRDFVLEDDKIRKEMSHDLERAGVSRIV 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG+IIG++G + E++R KL +T ++ L++ EV ++A L+
Sbjct: 61 IERTRDRVRVDIHTARPGIIIGRRGAEAERVRAKLEKLTGKQVQLNIFEVKNAALDAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ IA+QL RV FRRAM++A Q AMR GA G+++ SGRL GAE+SR+E Y EGRVPLQ
Sbjct: 121 AQGIAEQLTNRVTFRRAMRKAQQDAMRAGAKGIRIKLSGRLGGAEMSRSEFYREGRVPLQ 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
TLRA IDYG A+T YG G+KV++ D A +
Sbjct: 181 TLRALIDYGFFEAKTTYGRIGVKVWIYKGDMTEREFEEQQAQQ 223
>gi|58416962|emb|CAI28075.1| 30S ribosomal protein S3 [Ehrlichia ruminantium str. Gardel]
Length = 217
Score = 237 bits (606), Expect = 7e-61, Method: Composition-based stats.
Identities = 109/212 (51%), Positives = 151/212 (71%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RL + TW+S W+A +Y LHED +R++++ A ++K++I R
Sbjct: 7 MGQKSNPIGLRLKIINTWDSLWYAN-KDYTTKLHEDFLLRKFIKKAFYHASISKVVIARK 65
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ VYSA+PG+IIGKKG DI+K+++K+ M N+ I L++ EV KPE+ A LIA++I
Sbjct: 66 VDVIMVNVYSAKPGVIIGKKGADIDKVKQKIVKMINNNIELNIIEVKKPELKAILIAENI 125
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLERRV FRRAMKR+VQS ++ GA G+KV +GRL GAE++RTE Y EG VPL T RA
Sbjct: 126 AQQLERRVSFRRAMKRSVQSCLKIGAKGIKVSCAGRLGGAEIARTEWYKEGSVPLHTFRA 185
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
+IDYG + A+T YG G+KV+V L + S ++
Sbjct: 186 NIDYGFSEAKTIYGIIGVKVWVYLGETKSSNE 217
>gi|86141146|ref|ZP_01059692.1| putative 30S ribosomal protein S3 [Leeuwenhoekiella blandensis
MED217]
gi|85831705|gb|EAQ50160.1| putative 30S ribosomal protein S3 [Leeuwenhoekiella blandensis
MED217]
Length = 238
Score = 237 bits (606), Expect = 7e-61, Method: Composition-based stats.
Identities = 100/216 (46%), Positives = 149/216 (68%), Gaps = 2/216 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ W S W+ G++YG L ED KIR+Y+ L +A V++++IERT
Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDKLAEDDKIRKYIHARLSKASVSRVIIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + + +ARPG+IIGK G +++K++++L +TN E+ +++ E+ +PE++A L+A S+
Sbjct: 60 LKLVTVTITTARPGIIIGKGGQEVDKLKEELKQITNKEVQINIFEIKRPELDAYLVASSV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E R+ +RRA K A+ +AMR A+G+K+ SGRLNGAE++R+E Y EGR+PL T RA
Sbjct: 120 ARQIENRISYRRATKMAIAAAMRMNAEGIKIQISGRLNGAEMARSESYKEGRIPLSTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
IDY A T YG GIKV++ + EV P
Sbjct: 180 DIDYALVEAHTTYGRLGIKVWIM-KGEVYGKRELSP 214
>gi|189465424|ref|ZP_03014209.1| hypothetical protein BACINT_01777 [Bacteroides intestinalis DSM
17393]
gi|224537823|ref|ZP_03678362.1| hypothetical protein BACCELL_02710 [Bacteroides cellulosilyticus
DSM 14838]
gi|189437698|gb|EDV06683.1| hypothetical protein BACINT_01777 [Bacteroides intestinalis DSM
17393]
gi|224520509|gb|EEF89614.1| hypothetical protein BACCELL_02710 [Bacteroides cellulosilyticus
DSM 14838]
Length = 243
Score = 237 bits (606), Expect = 7e-61, Method: Composition-based stats.
Identities = 100/227 (44%), Positives = 152/227 (66%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ W+S W+ G+ YG L ED KIR+YL L +A V++I+IERT
Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWY-GGNNYGDSLLEDSKIRKYLNARLAKASVSRIVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I V +ARPG+IIGK G +++K++++L +T+ +I +++ EV +PE++A ++A +I
Sbjct: 60 LKLVTITVCTARPGIIIGKGGQEVDKLKEELKKVTDKDIQINIFEVKRPELDAVIVANNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E ++ +RRA+K A+ + MR GA+G+K+ SGRLNGAE++R+E Y EGR PL T RA
Sbjct: 120 ARQVEGKIAYRRAIKMAIANTMRMGAEGIKIQISGRLNGAEMARSEMYKEGRTPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDY A A T G GIKV++ + + + + + S
Sbjct: 180 DIDYCHAEALTKVGLLGIKVWICRGEVFGKRELAPNFTQSKESGRGS 226
>gi|298243962|ref|ZP_06967769.1| ribosomal protein S3 [Ktedonobacter racemifer DSM 44963]
gi|297557016|gb|EFH90880.1| ribosomal protein S3 [Ktedonobacter racemifer DSM 44963]
Length = 339
Score = 237 bits (606), Expect = 7e-61, Method: Composition-based stats.
Identities = 102/229 (44%), Positives = 144/229 (62%), Gaps = 12/229 (5%)
Query: 1 MGQKINPILFRLGVNCTWNS---RWFARGSEYGALLHEDLKIREYLQCHLKQA------- 50
MG K++PI FRLGV W S RW+A + Y +L ED++IR + L A
Sbjct: 1 MGHKVHPIGFRLGVIKGWESWQSRWYAE-NNYKDVLAEDIQIRRMINKELSSAHGAKVDA 59
Query: 51 GVAKILIERT-HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKP 109
GV+KI IER K + + +A+PG++IGK G +E+++ L + T + + + E+ +P
Sbjct: 60 GVSKIEIERAAPKQVLVKINTAKPGIVIGKSGEKVERLKAHLESKTQKRVRVEIVEIRQP 119
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
E++A L+ +SI QLE+RV FRRAMK+AVQ +MR GA G+KVIA GRL GAE++RTE +
Sbjct: 120 ELDAYLVGRSICDQLEKRVSFRRAMKQAVQKSMRAGAKGIKVIAGGRLGGAEIARTEKEV 179
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
EG+VPL TLRA IDYG A A T +G G+KV++ D + A
Sbjct: 180 EGKVPLHTLRADIDYGLAEAHTTFGVIGVKVWIYRGDILPSRRRESAEA 228
>gi|283782763|ref|YP_003373517.1| ribosomal protein S3 [Gardnerella vaginalis 409-05]
gi|283441952|gb|ADB14418.1| ribosomal protein S3 [Gardnerella vaginalis 409-05]
Length = 272
Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats.
Identities = 103/223 (46%), Positives = 148/223 (66%), Gaps = 4/223 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE----YGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQKINP +RLG+ S+WF+ ++ Y + ED KIR+ + L++AGV++I+
Sbjct: 1 MGQKINPFGYRLGITENHRSKWFSDSNKAGERYRDFVLEDDKIRKEMSHDLERAGVSRIV 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG+IIG++G + E++R KL +T ++ L++ EV ++A L+
Sbjct: 61 IERTRDRVRVDIHTARPGIIIGRRGAEAERVRAKLEKLTGKQVQLNIFEVKNAALDAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ IA+QL RV FRRAM++A Q AMR GA G+++ SGRL GAE+SR+E Y EGRVPLQ
Sbjct: 121 AQGIAEQLTNRVTFRRAMRKAQQDAMRAGAKGIRIKLSGRLGGAEMSRSEFYREGRVPLQ 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
TLRA IDYG A+T YG G+KV++ D A +
Sbjct: 181 TLRALIDYGFFEAKTTYGRIGVKVWIYKGDMTEREFEEQQAQQ 223
>gi|294786417|ref|ZP_06751671.1| ribosomal protein S3 [Parascardovia denticolens F0305]
gi|315225979|ref|ZP_07867767.1| 30S ribosomal protein S3 [Parascardovia denticolens DSM 10105]
gi|294485250|gb|EFG32884.1| ribosomal protein S3 [Parascardovia denticolens F0305]
gi|315120111|gb|EFT83243.1| 30S ribosomal protein S3 [Parascardovia denticolens DSM 10105]
Length = 270
Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats.
Identities = 102/223 (45%), Positives = 151/223 (67%), Gaps = 4/223 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE----YGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQK+NP +RLGV S+WF+ ++ Y + ED KIR+ ++ L++AGV++I+
Sbjct: 1 MGQKVNPFGYRLGVTEYHRSKWFSDSTKVGERYRDFVLEDDKIRKEMEKDLERAGVSRIV 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + +++R KL +T ++ L++ EV ++A L+
Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEADRVRAKLEKITGKQVQLNIFEVKNAALDAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQSIA+QL RV FRRAM++A Q AMR GA G+++ SGRL GAE+SR+E Y EGRVPLQ
Sbjct: 121 AQSIAEQLTNRVTFRRAMRKAQQDAMRAGAHGIRIKLSGRLGGAEMSRSEFYREGRVPLQ 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
TLRA IDYG A+T YG G+KV++ D A++
Sbjct: 181 TLRALIDYGFFEAKTTYGRIGVKVWIYKGDMTEREFEEQQASQ 223
>gi|113170446|ref|YP_717238.1| Rps3 [Ostreococcus tauri]
gi|122235244|sp|Q0P3L7|RR3_OSTTA RecName: Full=30S ribosomal protein S3, chloroplastic
gi|112806853|emb|CAL36360.1| Rps3 [Ostreococcus tauri]
Length = 211
Score = 237 bits (605), Expect = 8e-61, Method: Composition-based stats.
Identities = 93/209 (44%), Positives = 136/209 (65%), Gaps = 2/209 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI FR+GV T S+WFA+ +Y L+ EDL IRE+ + L AG+++I I R
Sbjct: 1 MGQKVHPIGFRIGVTQTHRSQWFAKPKDYAKLVEEDLLIREFAESRLPDAGISRINISRQ 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLIAQ 118
I ++ARP ++G KG + ++R ++ + L V + +PE+ A IA+
Sbjct: 61 VDRIEIEFFTARPRALVGAKGETLTQLRDEIKAKLPDTRNVALYVTKTQQPEMEAICIAE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
+IA+QLE+R FRR M++A+ A + GA+G+K+ SGRLNGAE++R E EGRVPL T+
Sbjct: 121 NIAEQLEKRTPFRRTMRQAIMRARKAGAEGIKIQISGRLNGAEIARHEWAREGRVPLHTI 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
RA IDY TA A+T YG GIKV+V ++
Sbjct: 181 RADIDYATARAQTIYGILGIKVWVCKGEK 209
>gi|282880994|ref|ZP_06289685.1| ribosomal protein S3 [Prevotella timonensis CRIS 5C-B1]
gi|281305217|gb|EFA97286.1| ribosomal protein S3 [Prevotella timonensis CRIS 5C-B1]
Length = 242
Score = 237 bits (605), Expect = 9e-61, Method: Composition-based stats.
Identities = 97/222 (43%), Positives = 150/222 (67%), Gaps = 1/222 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ W+S WF G ++G L ED KIR+YL L +A +++I+IERT
Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWF-GGKDFGDNLVEDRKIRKYLNERLAKASLSRIIIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I + +ARPG++IGK G D++K++++L N+ + +I +++ EV KPE++A ++ +I
Sbjct: 60 LKLVTITICTARPGIVIGKGGQDVDKLKEELKNLFHKDIQINIFEVKKPELDAIIVGNNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E ++ +RRA+K A+Q+ MR GA+G+K+ +GRLNGAE++R E Y EGR PL T RA
Sbjct: 120 ARQVEGKIAYRRAIKMAIQNTMRAGAEGIKIQITGRLNGAEMARKEMYKEGRTPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
IDY A T G GIKV++ + + T ++ +
Sbjct: 180 DIDYCQTEALTKVGLLGIKVWICRGEIYGKQELTPNFSQEKA 221
>gi|320103623|ref|YP_004179214.1| 30S ribosomal protein S3P [Isosphaera pallida ATCC 43644]
gi|319750905|gb|ADV62665.1| SSU ribosomal protein S3P [Isosphaera pallida ATCC 43644]
Length = 234
Score = 237 bits (605), Expect = 9e-61, Method: Composition-based stats.
Identities = 108/230 (46%), Positives = 147/230 (63%), Gaps = 6/230 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+ P FR+G+ W SRW+A ++ LL ED KIR+Y++ AG+ K+ IERT
Sbjct: 1 MGQKVRPTGFRVGIMEDWRSRWYASKQDFSDLLVEDFKIRKYIKTKHGNAGIPKVEIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++I+++ARPG+IIGKKG ++EK++++L +T I + + EV +PEINA LIA+ I
Sbjct: 61 RDAVKVILFTARPGVIIGKKGAEVEKLQEELQKLTGRRIDIKIEEVNRPEINAQLIAEDI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+RRV FRR +KRA +S M GA GVKV SGRL GAE+SRTE G +PL TLRA
Sbjct: 121 ADQLQRRVSFRRTIKRAQESTMEAGAKGVKVQLSGRLGGAEMSRTEQGAAGSIPLSTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVS------DSDSTIPAAEHRVVE 224
IDYG A A+T G GIKV+V+ D + D+ +
Sbjct: 181 KIDYGFAEAKTPQGHIGIKVWVNQGDYLKLEGSADGHDAQKGEVSKKSKR 230
>gi|257125042|ref|YP_003163156.1| ribosomal protein S3 [Leptotrichia buccalis C-1013-b]
gi|257048981|gb|ACV38165.1| ribosomal protein S3 [Leptotrichia buccalis C-1013-b]
Length = 218
Score = 237 bits (605), Expect = 9e-61, Method: Composition-based stats.
Identities = 96/214 (44%), Positives = 146/214 (68%), Gaps = 1/214 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ TW+S+WFA G EY HEDLKI+EY++ + AG++ I IERT
Sbjct: 1 MGQKVDPRGIRLGITRTWDSKWFAEGKEYVNNFHEDLKIKEYIKKNYYHAGISSIQIERT 60
Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
+I+ + + G++IG+KG +IE ++ KL +T + + V E+ P +A L+A+S
Sbjct: 61 SPTEVAVIIETGKAGILIGRKGQEIEALKVKLEKLTGKRVQIKVQEIKNPNKDAQLVAES 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA +E+RV ++RA+++A+Q A + G G+KV+ SGRLNGAE++R+E L GRVPL TLR
Sbjct: 121 IATAIEKRVAYKRAVQQAIQRAEKAGIKGIKVMVSGRLNGAEIARSEWTLSGRVPLHTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
A +DY TA A T YG+ G+KV++ + +S +
Sbjct: 181 ADVDYATATAHTTYGALGLKVWIFNGEVLSTTKE 214
>gi|154486753|ref|ZP_02028160.1| hypothetical protein BIFADO_00578 [Bifidobacterium adolescentis
L2-32]
gi|154084616|gb|EDN83661.1| hypothetical protein BIFADO_00578 [Bifidobacterium adolescentis
L2-32]
Length = 267
Score = 237 bits (605), Expect = 9e-61, Method: Composition-based stats.
Identities = 101/223 (45%), Positives = 147/223 (65%), Gaps = 4/223 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE----YGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQKINP +RLG+ S+WF+ ++ Y + ED IR+ + L++AGV++I+
Sbjct: 1 MGQKINPFGYRLGITENHCSKWFSDSNKVGERYRDFVLEDDAIRKAMSKDLERAGVSRIV 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + E++R KL +T ++ L++ EV ++A L+
Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEAERVRAKLEKLTGKQVQLNIFEVKNAALDAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ IA+QL RV FRRAM++A Q AMR GA G+++ SGRL GAE+SR+E Y EGRVPLQ
Sbjct: 121 AQGIAEQLTNRVTFRRAMRKAQQDAMRAGAKGIRIKLSGRLGGAEMSRSEFYREGRVPLQ 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
TLRA IDYG A+T YG G+KV++ D A +
Sbjct: 181 TLRALIDYGFFEAKTTYGRIGVKVWIYKGDMTEREFEEQQAQQ 223
>gi|325125181|gb|ADY84511.1| 30S ribosomal protein S3 [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 223
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 100/225 (44%), Positives = 150/225 (66%), Gaps = 2/225 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KINPI FRLGVN W ++W+A Y L+EDL+IR++L LK A V+ + IER
Sbjct: 1 MGSKINPIGFRLGVNRDWEAKWYA-ARGYKETLNEDLRIRKFLDEKLKDASVSTVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++ARPG++IGK G ++E + K+++ +TN ++H+++ E+ KP++ A L+A I
Sbjct: 60 ANRVNIAIHTARPGMVIGKGGAEVEALNKEINALTNKQVHINIVEIKKPDLEAKLVADGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE R+ FRRA ++A Q +MR GA G+KV +GRLNGA+++R E + EG VPL TLRA
Sbjct: 120 ARQLEARIAFRRASRQAAQRSMRAGAKGIKVQTAGRLNGADIARREWHTEGSVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY A T YG G+KV+++ + + + PA + +K
Sbjct: 180 DIDYAWVNAFTTYGEIGVKVWINRGEILPGRKNQ-PAKRSKGGKK 223
>gi|62184743|ref|YP_219528.1| 30S ribosomal protein S3 [Chlamydophila abortus S26/3]
gi|81313074|sp|Q5L714|RS3_CHLAB RecName: Full=30S ribosomal protein S3
gi|62147810|emb|CAH63556.1| 30S ribosomal protein s3 [Chlamydophila abortus S26/3]
Length = 223
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 99/207 (47%), Positives = 140/207 (67%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK PI FR GV W S W+ E+G L ED+KIRE+L+ G A ++ R
Sbjct: 1 MGQKGCPIGFRTGVTKKWRSLWYGNKQEFGKFLIEDVKIREFLRKKPSCQGAAGFVVRRM 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ + +ARPGL+IGKKG +++ ++++L +T E+ + + E+ +PE+NA L+A +I
Sbjct: 61 SGKIEVTIQTARPGLVIGKKGAEVDLLKEELRKLTGKEVWVEIAEIKRPELNAKLVADNI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+ERRV FRRAMK+A+QS M GA GVK+ SGRL GAE++R+E Y GRVPL TLRA
Sbjct: 121 ARQIERRVSFRRAMKKAMQSVMDAGAVGVKIQVSGRLAGAEIARSEWYKNGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDE 207
IDY A A T YG G+KV+++L ++
Sbjct: 181 DIDYAAASAATTYGIIGVKVWINLGEK 207
>gi|255536148|ref|YP_003096519.1| 30S ribosomal protein S3 [Flavobacteriaceae bacterium 3519-10]
gi|255342344|gb|ACU08457.1| SSU ribosomal protein S3p (S3e) [Flavobacteriaceae bacterium
3519-10]
Length = 251
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 99/222 (44%), Positives = 150/222 (67%), Gaps = 1/222 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ W+S WF G YG + ED KIR YL+ L + G+++I IERT
Sbjct: 1 MGQKTNPIGNRLGIIRGWDSNWF-GGKNYGDRIAEDYKIRRYLEARLSKGGISRIYIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + + +ARPGLIIGK G +++K++++L +T+ +I +++ E+ +PE++A L+A SI
Sbjct: 60 LKLVTVTITTARPGLIIGKGGQEVDKLKEELKKITDKDIQINIFEIKRPELDAVLVADSI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E R+ +RRA+K ++QS MR GA+G+KV SGRLNGAE++R+E + +GR+PL T RA
Sbjct: 120 AKQIENRISYRRAVKMSIQSTMRMGAEGIKVQISGRLNGAEMARSESFKDGRIPLSTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
IDY A T YG G+KV++ + D + + +
Sbjct: 180 DIDYHIGEALTQYGKLGVKVWIMKGEVYGKRDLSPLVGQQKK 221
>gi|149922205|ref|ZP_01910643.1| ribosomal protein S3 [Plesiocystis pacifica SIR-1]
gi|149816945|gb|EDM76430.1| ribosomal protein S3 [Plesiocystis pacifica SIR-1]
Length = 225
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 113/226 (50%), Positives = 155/226 (68%), Gaps = 1/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +PI FRLG+ TWNSRWF G Y LHEDL++R +L+ L A +++I IER
Sbjct: 1 MGQKTHPIGFRLGIVKTWNSRWFEEGR-YKQWLHEDLQLRGFLKRKLISASISEITIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I ++SARPG+IIGK+G ++EKIR+++ MT+S++ L++ EV K E+NA L+A++I
Sbjct: 60 ANKVKINIFSARPGIIIGKRGAEVEKIRREVQKMTDSKVFLNIQEVRKAEVNAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
QQLERR+ FRRA+KRAVQ+AM+FGA G++V A+GRL GAE+ R E YL+GRVPL TLRA
Sbjct: 120 GQQLERRIAFRRALKRAVQTAMKFGAKGIRVNAAGRLGGAEMGRREWYLQGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDYG A T G GIK ++ + P ++
Sbjct: 180 DIDYGFHEARTPAGRIGIKCWIFKGEVYGSMSGVDPRFPRPANKRS 225
>gi|317054772|ref|YP_004103239.1| 30S ribosomal protein S3 [Ruminococcus albus 7]
gi|315447041|gb|ADU20605.1| ribosomal protein S3 [Ruminococcus albus 7]
Length = 272
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 101/227 (44%), Positives = 141/227 (62%), Gaps = 16/227 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ----------- 49
MGQK+NP R+GV W+SRWFA S +G L ED IR+ + L +
Sbjct: 1 MGQKVNPHGLRVGVIKNWDSRWFADKSTFGDTLVEDYNIRKDIMKDLNRRSKNPADKCVY 60
Query: 50 AGVAKILIERT-----HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVN 104
AGV K+ IER + RI +Y A+PG++IGK G +I+K+R+ + + +++
Sbjct: 61 AGVPKVEIERFTGKDGAQKVRIHIYCAKPGMVIGKGGAEIDKLRESIEKKIGKSVAINIV 120
Query: 105 EVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSR 164
EV P+INA L+A+ IA LE R+ FRRAMK+++ AM+ GA G+KV SGRL GAE++R
Sbjct: 121 EVKNPDINAQLVAEKIAHDLEDRISFRRAMKQSIGRAMKLGAKGIKVKVSGRLAGAEIAR 180
Query: 165 TECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
+E Y EG +PLQT+RA IDYGTA A T YG GIKV++ + +
Sbjct: 181 SESYHEGTIPLQTIRADIDYGTAEAHTTYGRLGIKVWIYRGEVLKGE 227
>gi|329121834|ref|ZP_08250449.1| 30S ribosomal protein S3 [Dialister micraerophilus DSM 19965]
gi|327467772|gb|EGF13264.1| 30S ribosomal protein S3 [Dialister micraerophilus DSM 19965]
Length = 249
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 104/217 (47%), Positives = 146/217 (67%), Gaps = 1/217 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV WNS+WFA Y A L ED KIR++L+ HL AG++KI I+R
Sbjct: 1 MGQKVNPHGMRVGVINDWNSKWFAE-KNYAAQLVEDTKIRQFLKKHLFVAGISKIGIKRV 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I +Y+A+PG++IG+ GT IE I+K L +T+ EI + + E+ +++A L+ ++I
Sbjct: 60 GNRVKIAIYTAKPGMVIGRGGTGIEDIKKALKTVTDKEIDIDILEIKSSDLSAILVGENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR+ FRRA+K+AV MR GA GVKV SGRL GAE++ +E Y EG +PLQTLRA
Sbjct: 120 ASQLERRIGFRRAVKQAVGRTMRSGAKGVKVTVSGRLGGAEIAHSESYREGSIPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
+IDYG +VA T +G+ GIKV++ +
Sbjct: 180 NIDYGVSVAHTTFGAIGIKVWIYKGELAPGQMVDEAE 216
>gi|291514949|emb|CBK64159.1| SSU ribosomal protein S3P [Alistipes shahii WAL 8301]
Length = 262
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 98/205 (47%), Positives = 142/205 (69%), Gaps = 1/205 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ W+S WF G ++ L ED KIR+YL L +A ++KI+IERT
Sbjct: 1 MGQKVNPIANRLGIIRGWDSNWF-GGKDFSDKLVEDAKIRKYLNVRLAKASISKIIIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + + +ARPG+IIGK G +++K++++L +T EI +++ EV +PE++A ++ Q+I
Sbjct: 60 LKLVTVTISTARPGIIIGKGGQEVDKLKEELKKLTGKEIQINIFEVKRPEVDAVIVGQNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRA+K AV S MR GA+G+K+ +GR+ GAE++RTE EGR+PL T RA
Sbjct: 120 ARQLEGRVSFRRAVKTAVASTMRMGAEGIKIQVAGRVGGAEMARTETIKEGRIPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLR 205
IDY A T G G+KV++
Sbjct: 180 DIDYCLTEALTKVGILGVKVWICQG 204
>gi|260891588|ref|ZP_05902851.1| hypothetical protein GCWU000323_02803 [Leptotrichia hofstadii
F0254]
gi|260858696|gb|EEX73196.1| ribosomal protein S3 [Leptotrichia hofstadii F0254]
Length = 218
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 96/214 (44%), Positives = 146/214 (68%), Gaps = 1/214 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ TW+S+WFA G EY HEDLKI+EY++ + AG++ I IERT
Sbjct: 1 MGQKVDPRGIRLGITRTWDSKWFAEGKEYVNNFHEDLKIKEYVKKNYYHAGISSIQIERT 60
Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
+I+ + + G++IG+KG +IE ++ KL +T + + V E+ P +A L+A+S
Sbjct: 61 SPTEVAVIIETGKAGILIGRKGQEIEALKVKLEKLTGKRVQIKVQEIKNPNKDAQLVAES 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA +E+RV ++RA+++A+Q A + G G+KV+ SGRLNGAE++R+E L GRVPL TLR
Sbjct: 121 IATAIEKRVAYKRAVQQAIQRAEKAGIKGIKVMVSGRLNGAEIARSEWTLSGRVPLHTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
A +DY TA A T YG+ G+KV++ + +S +
Sbjct: 181 ADVDYATATAHTTYGALGLKVWIFNGEVLSTTKE 214
>gi|320538159|ref|ZP_08038054.1| ribosomal protein S3 [Treponema phagedenis F0421]
gi|320144976|gb|EFW36697.1| ribosomal protein S3 [Treponema phagedenis F0421]
Length = 251
Score = 236 bits (603), Expect = 2e-60, Method: Composition-based stats.
Identities = 101/228 (44%), Positives = 143/228 (62%), Gaps = 2/228 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--HLKQAGVAKILIE 58
MGQK+NPI RLG+N TW+SRW+A EY LHEDL+IR+ +Q K +A + I
Sbjct: 1 MGQKVNPIGLRLGINKTWSSRWYADPREYADTLHEDLRIRKIIQELPEAKNDDIACVDII 60
Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118
R + I++++ARPG+IIG KG IEKI + + ++ + + E+ + E+NA+L+AQ
Sbjct: 61 RHPQRITIMIHTARPGVIIGVKGATIEKIGADIQKKLDKKVQIKIKEIKRAELNASLVAQ 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
++A+QL R FR+A+K+A + M+ GA GVK+ SGRL GAE+SRTE EGR PL TL
Sbjct: 121 NVARQLAGRASFRKALKQACFNTMKAGAQGVKIRVSGRLGGAEMSRTEEMKEGRTPLHTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
RA IDYG A A T YG G+KV++ + + R K+
Sbjct: 181 RADIDYGFAEAHTTYGKIGVKVWLYAGMMYGNEQKEDAGSLLRKQRKE 228
>gi|226968560|ref|YP_002808513.1| small subunit ribosomal protein S3 [Micromonas pusilla CCMP1545]
gi|226348855|gb|ACO50758.1| small subunit ribosomal protein S3 [Micromonas pusilla CCMP1545]
Length = 227
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 97/228 (42%), Positives = 144/228 (63%), Gaps = 4/228 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FR+GV T S+WFA+ +Y L+ EDL IR+Y+ HL A ++++ I R
Sbjct: 1 MGQKVHPLGFRIGVTQTHRSQWFAKPKDYANLVKEDLVIRDYVAKHLSDASISRVNISRQ 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLIAQ 118
I ++ARP ++G KG + K+R+ LS + + L V + +PE++A IA+
Sbjct: 61 VDRIEIEFFTARPRALVGAKGEALVKVREALSAKLPAHRSVALYVTKTVQPEVDAVCIAE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
+IA QLE+R FRR +++A++SA + GA G+KV +GRLNGAE++R+E EGRVPL T+
Sbjct: 121 NIAMQLEKRAPFRRTIRQALRSAQQAGAVGIKVKIAGRLNGAEIARSEWSREGRVPLHTI 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
RA IDY TA A T YG GIKV+V D ++ P+A +
Sbjct: 181 RADIDYATARALTVYGILGIKVWVCKDD--TERFKPQPSASAPSGSEG 226
>gi|330837649|ref|YP_004412290.1| 30S ribosomal protein S3P [Spirochaeta coccoides DSM 17374]
gi|329749552|gb|AEC02908.1| SSU ribosomal protein S3P [Spirochaeta coccoides DSM 17374]
Length = 236
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 96/209 (45%), Positives = 143/209 (68%), Gaps = 2/209 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--HLKQAGVAKILIE 58
MGQK+NPI RLG+N TW S+W+ EY LHEDL++R+ L ++ A ++ + I
Sbjct: 1 MGQKVNPIGLRLGINKTWKSKWYVDPREYVDTLHEDLRLRKTLNECPEVQGAEISDVEII 60
Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118
R + I++ ++RPG+IIG KG ++EK+ ++L +++ ++ + + E+ KPE++A LIA
Sbjct: 61 RKPQRITIVLATSRPGIIIGSKGANVEKLGQRLQKLSDKKVQIKIKEIKKPEVDAQLIAA 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
++A+QL R FRR+MK AV AM+ GA GVK+ SGRL GAE++RTE EGRVPL TL
Sbjct: 121 NVAKQLTSRGSFRRSMKMAVSKAMQGGAQGVKIRLSGRLGGAEIARTEWMKEGRVPLHTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
R+ IDYG A A T +G+ G+KV+V +
Sbjct: 181 RSDIDYGFAQANTTFGAIGVKVWVFNGEI 209
>gi|330997359|ref|ZP_08321210.1| ribosomal protein S3 [Paraprevotella xylaniphila YIT 11841]
gi|329570733|gb|EGG52449.1| ribosomal protein S3 [Paraprevotella xylaniphila YIT 11841]
Length = 240
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 102/226 (45%), Positives = 153/226 (67%), Gaps = 1/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ W+S W+ G ++G L ED KIR+YL L QA V++I+IERT
Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWY-GGKDFGDSLLEDSKIRKYLNARLAQASVSRIVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I V +ARPGLIIGK G +++K++++L +T+ +I +++ E+ KPE++A ++A +I
Sbjct: 60 LKLVTITVCTARPGLIIGKGGQEVDKLKEELKKITDKDIQINIFEIKKPELDAVIVANNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E ++ +RRA+K A+ + MR GA+G+K++ SGRLNGAE++R+E Y EGR PL T RA
Sbjct: 120 ARQVEGKIAYRRAIKMAIANTMRSGAEGIKILISGRLNGAEMARSEMYKEGRTPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDY A A T G GIKV++ + D A+ + +
Sbjct: 180 DIDYCQAEALTKVGLLGIKVWICRGEVYGKRDLAPNFAQTKENSRG 225
>gi|313204923|ref|YP_004043580.1| SSU ribosomal protein s3p [Paludibacter propionicigenes WB4]
gi|312444239|gb|ADQ80595.1| SSU ribosomal protein S3P [Paludibacter propionicigenes WB4]
Length = 253
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 100/226 (44%), Positives = 151/226 (66%), Gaps = 1/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RLG+ W+S W+ G+ YG + ED KIR+YL L +A +++I+IERT
Sbjct: 1 MGQKINPISNRLGIIRGWDSNWY-GGNNYGDTILEDSKIRKYLNARLAKASISRIVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I V +ARPG+IIGK G +++K++++L +T+ E+ +++ EV +PE++A ++A ++
Sbjct: 60 LKLVTITVCTARPGIIIGKGGQEVDKLKEELKKITDKEVQINIFEVKRPELDAVIVANNV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E ++ +RRA K A+ S MR GA+G+K++ SGRLNGAE++R+E Y EGR PL TLRA
Sbjct: 120 ARQVEGKIAYRRATKMAIASTMRMGAEGIKIMCSGRLNGAEMARSEMYKEGRTPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDY A A T G GIKV++ + D + +
Sbjct: 180 DIDYAHAEALTKVGLIGIKVWICRGEIYGKKDLAPNFTATKEASRG 225
>gi|325678646|ref|ZP_08158256.1| ribosomal protein S3 [Ruminococcus albus 8]
gi|324109696|gb|EGC03902.1| ribosomal protein S3 [Ruminococcus albus 8]
Length = 275
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 103/227 (45%), Positives = 140/227 (61%), Gaps = 16/227 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ----------- 49
MGQK+NP R+GV W+SRWFA S +G L ED IR+ + L +
Sbjct: 1 MGQKVNPHGLRVGVIKNWDSRWFADKSTFGDTLVEDYNIRKDIMKDLNRRSKNPADKCVY 60
Query: 50 AGVAKILIERT-----HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVN 104
AGV K+ IER + RI +Y A+PGL+IGK G +IEK+R + + +++
Sbjct: 61 AGVPKVEIERFTGKDGAQKVRIHIYCAKPGLVIGKGGAEIEKLRAAIEKKIGKSVAINIV 120
Query: 105 EVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSR 164
EV P+INA L+A+ IA LE R+ FRRAMK+++ AM+ GA G+KV SGRL GAE++R
Sbjct: 121 EVKNPDINAQLVAEKIAHDLEDRISFRRAMKQSIGRAMKLGAKGIKVKVSGRLAGAEIAR 180
Query: 165 TECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
+E Y EG +PLQT+RA IDYGTA A T YG GIKV++ + +
Sbjct: 181 SESYHEGTIPLQTIRADIDYGTAEAHTTYGRLGIKVWIYRGEVLKGE 227
>gi|212716605|ref|ZP_03324733.1| hypothetical protein BIFCAT_01534 [Bifidobacterium catenulatum DSM
16992]
gi|225351039|ref|ZP_03742062.1| hypothetical protein BIFPSEUDO_02621 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|212660309|gb|EEB20884.1| hypothetical protein BIFCAT_01534 [Bifidobacterium catenulatum DSM
16992]
gi|225158495|gb|EEG71737.1| hypothetical protein BIFPSEUDO_02621 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 267
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 101/223 (45%), Positives = 148/223 (66%), Gaps = 4/223 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSE----YGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQKINP +RLG+ + S+WF+ ++ Y + ED IR+ + L++AGV++I+
Sbjct: 1 MGQKINPFGYRLGITESHRSKWFSDSNKVGERYRDFVLEDDVIRKAMSKDLERAGVSRIV 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
IERT R+ +++ARPG++IG++G + E++R KL +T ++ L++ EV ++A L+
Sbjct: 61 IERTRDRVRVDIHTARPGIVIGRRGAEAERVRAKLEKLTGKQVQLNIFEVKNAALDAQLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ IA+QL RV FRRAM++A Q AMR GA G+++ SGRL GAE+SR+E Y EGRVPLQ
Sbjct: 121 AQGIAEQLTNRVTFRRAMRKAQQDAMRAGAKGIRIKLSGRLGGAEMSRSEFYREGRVPLQ 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
TLRA IDYG A+T YG G+KV++ D A +
Sbjct: 181 TLRALIDYGFFEAKTTYGRIGVKVWIYKGDMTEREFEEQQAQQ 223
>gi|166368478|ref|YP_001660751.1| 30S ribosomal protein S3 [Microcystis aeruginosa NIES-843]
gi|189045019|sp|B0JHZ7|RS3_MICAN RecName: Full=30S ribosomal protein S3
gi|166090851|dbj|BAG05559.1| 30S ribosomal protein S3 [Microcystis aeruginosa NIES-843]
Length = 242
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 100/220 (45%), Positives = 139/220 (63%), Gaps = 2/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P+ FRLGV S W+A Y LL ED +IR+Y++ +L AG+A I IER
Sbjct: 1 MGQKIHPLGFRLGVIKDHKSCWYADAKRYPELLQEDRRIRQYVEKNLANAGIADIRIERK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN--SEIHLSVNEVPKPEINATLIAQ 118
I +++ARPG+++G+ GT IE++R L +I ++V EV + + +A LIA+
Sbjct: 61 ADQVDISIHTARPGVVVGRGGTGIEQLRLGLQKALGGQRQIRINVIEVARVDADANLIAE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
IAQQLERRV FRR +++A+Q A R G+K+ SGRLNGAE++RTE EGRVPL TL
Sbjct: 121 YIAQQLERRVSFRRVVRQAIQRAQRAEVKGIKIQVSGRLNGAEIARTEWVREGRVPLHTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
RA IDY A T YG G+KV++ + + + A
Sbjct: 181 RADIDYSYKTASTIYGILGVKVWIFKGEIIPGQEEIAAAV 220
>gi|146298155|ref|YP_001192746.1| 30S ribosomal protein S3 [Flavobacterium johnsoniae UW101]
gi|189045007|sp|A5FMZ4|RS3_FLAJO RecName: Full=30S ribosomal protein S3
gi|146152573|gb|ABQ03427.1| 30S ribosomal protein S3 [Flavobacterium johnsoniae UW101]
Length = 252
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 100/222 (45%), Positives = 154/222 (69%), Gaps = 1/222 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ W+S W+ G++YG L ED KIR+Y+ L +A V+K++IERT
Sbjct: 1 MGQKTNPIGNRLGIIRGWDSNWY-GGNDYGDKLAEDHKIRKYIHARLSKASVSKVIIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + + +ARPG+IIGK G +++K++++L +T+ E+ +++ E+ +PE++A L+A SI
Sbjct: 60 LKLVTVTITTARPGIIIGKGGQEVDKLKEELKKVTDKEVQINIFEIKRPELDAYLVATSI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E R+ +RRA+K A+ ++MR A+G+KV+ SGRLNGAE++R+E + EGR+PL T RA
Sbjct: 120 ARQIESRISYRRAIKMAIAASMRMNAEGIKVLISGRLNGAEMARSEGFKEGRIPLSTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
IDY A A T YG GIKV++ + D + A +
Sbjct: 180 DIDYALAEAHTTYGRMGIKVWIMKGEVYGKRDLSPLAGMDKK 221
>gi|289824219|ref|ZP_06543814.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
Length = 213
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 104/209 (49%), Positives = 145/209 (69%), Gaps = 1/209 (0%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLII 77
WNS WFA E+ L D K+R+YL L +A V++I+IER K+ R+ +++ARPG++I
Sbjct: 2 WNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERPAKSIRVTIHTARPGIVI 61
Query: 78 GKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRA 137
GKKG D+EK+RK ++++ +++ EV KPE++A L+A SI QLERRV+FRRAMKRA
Sbjct: 62 GKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRA 121
Query: 138 VQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197
VQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA IDY T+ A T YG G
Sbjct: 122 VQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIG 181
Query: 198 IKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
+KV++ + E+ + + E + +
Sbjct: 182 VKVWIF-KGEILGGMAAVEQPEKPAAQTE 209
>gi|303237478|ref|ZP_07324043.1| ribosomal protein S3 [Prevotella disiens FB035-09AN]
gi|302482298|gb|EFL45328.1| ribosomal protein S3 [Prevotella disiens FB035-09AN]
Length = 242
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 101/227 (44%), Positives = 149/227 (65%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ W S WF G ++G L ED KIR YL L++A V++I+IERT
Sbjct: 1 MGQKVNPISNRLGIIRGWESNWF-GGKDFGDNLLEDKKIRTYLNKRLEKASVSRIVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I + +ARPG++IGK G D++K++++L N+ EI +++ EV KPE++A ++ +I
Sbjct: 60 LKLVTITICTARPGIVIGKGGQDVDKLKEELKNLFKKEIQINIFEVKKPELDANIVGYNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E +V +RRA+K AV + MR GA+G+KV +GRLNGAE++R E + EGR PL T RA
Sbjct: 120 ARQVEGKVAYRRAIKMAVANTMRAGAEGIKVQITGRLNGAEMARKEMFKEGRTPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDY A T G GIKV++ + + D T + + + +
Sbjct: 180 DIDYCQTEALTKVGLLGIKVWICRGEVYNKVDLTPNFTQDKGNARSN 226
>gi|33519664|ref|NP_878496.1| 30S ribosomal protein S3 [Candidatus Blochmannia floridanus]
gi|61215719|sp|Q7VQE2|RS3_BLOFL RecName: Full=30S ribosomal protein S3
gi|33517327|emb|CAD83712.1| 30S ribosomal subunit protein S3 [Candidatus Blochmannia
floridanus]
Length = 235
Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 106/208 (50%), Positives = 152/208 (73%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ +W+S W+A + L+ D ++R++L L +A V++I+IER
Sbjct: 1 MGQKVHPNGMRLGIIKSWHSTWYANNKNFSNNLNNDFEVRKFLLGQLSKALVSRIIIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +Y+ARPG+IIG+KG DIEK+R+K+S ++ L+++E+ KPE+ A L+A +I
Sbjct: 61 AKSIRVTIYTARPGVIIGRKGEDIEKLREKVSKISGVPTKLNISEIRKPELEAKLLADNI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERRV+FRRA+KR VQSAMR GA G+KV SGRL+GAE++RTE Y EGRVPL T RA
Sbjct: 121 ASQLERRVIFRRAIKRVVQSAMRLGAKGIKVEVSGRLSGAEIARTEWYREGRVPLHTFRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEV 208
IDY + A T+YG G+KV+V + +
Sbjct: 181 DIDYSLSEAHTSYGVVGVKVWVFKGEIL 208
>gi|299830384|ref|YP_003734599.1| ribosomal protein S3 [Kryptoperidinium foliaceum]
gi|297385086|gb|ADI40384.1| ribosomal protein S3 [Kryptoperidinium foliaceum]
Length = 214
Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 87/212 (41%), Positives = 136/212 (64%), Gaps = 4/212 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +P+ FRLG+ S W+A ++Y +L ED KIR Y++ K ++ + I R
Sbjct: 1 MGQKTHPLGFRLGITQDHKSTWYANLNQYANVLEEDDKIRTYIKSISKANNISNLKIYRN 60
Query: 61 HKNCRI--IVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLI 116
N +I + + +PG+++G+ G+ +E + L + +N ++ + V EV K +++A L+
Sbjct: 61 GLNDQIQLTIETGKPGILVGELGSGLETLLTNLKKILPSNRQVTIKVFEVEKVDLDANLL 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
A +A+QLE+R+ FRRA++ A+Q A + +G+K+ SGRLNGAE++R+E EGRVPLQ
Sbjct: 121 ADLVAEQLEKRIAFRRAIREALQRAQKQNVNGIKIQVSGRLNGAEIARSEWIREGRVPLQ 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208
TLRA IDY T A T YG GIKV+V + +
Sbjct: 181 TLRADIDYATTEANTIYGVLGIKVWVFRSEIL 212
>gi|42526285|ref|NP_971383.1| 30S ribosomal protein S3 [Treponema denticola ATCC 35405]
gi|61215637|sp|Q73PM6|RS3_TREDE RecName: Full=30S ribosomal protein S3
gi|41816397|gb|AAS11264.1| ribosomal protein S3 [Treponema denticola ATCC 35405]
gi|325473229|gb|EGC76424.1| 30S ribosomal protein S3 [Treponema denticola F0402]
Length = 239
Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 100/232 (43%), Positives = 141/232 (60%), Gaps = 6/232 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--HLKQAGVAKILIE 58
MGQK+NP RLG+N TW+SRW+A Y LL EDLKIR +Q K A +A++ I
Sbjct: 1 MGQKVNPTGLRLGINKTWSSRWYAGPRNYADLLLEDLKIRAMIQEIPECKNADIAEVEII 60
Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118
R + I++++ARPG+IIG KG +IE I + ++ + + EV + E+ A L+AQ
Sbjct: 61 RHPQRITIMIHTARPGVIIGVKGANIENIGAIIQKKLGKKVQIKIKEVKRAELRAALVAQ 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
++A+QL R FR+ +K+A + MR GA G+K+ SGRL GAE+SRTE EGRVPL TL
Sbjct: 121 NVARQLAGRASFRKVLKQACFNTMRSGAQGIKIRISGRLGGAEMSRTEEMKEGRVPLHTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVS----LRDEVSDSDSTIPAAEHRVVEKD 226
RA IDYG A A+T YG G+KV++ E + + + R +
Sbjct: 181 RADIDYGFAEADTTYGKIGVKVWLYSGMMFGGEQKEDAGALLKKQRRPRTEK 232
>gi|330752354|emb|CBL87307.1| ribosomal protein S3 [uncultured Sphingobacteria bacterium]
Length = 247
Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 101/226 (44%), Positives = 154/226 (68%), Gaps = 1/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ W S W+ G E+G L ED KIR+YL + +AG++KILIER
Sbjct: 1 MGQKVNPISLRLGIVRGWESNWY-GGKEFGVKLAEDNKIRKYLNARMPRAGISKILIERM 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I V+++RPG++IGK G++++K+++++ +T ++ +++ EV +PE++A L+ QSI
Sbjct: 60 LKRIIITVHTSRPGIVIGKGGSEVDKLKEEVKKLTKKDVQINIFEVKRPELDAMLVGQSI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQ+E RV F+RA+K A+ S MR GA GVK++ SGRLNGAE++RT+ + EGR+PL T RA
Sbjct: 120 AQQIEGRVNFKRAIKMAIASTMRMGAQGVKIMVSGRLNGAEMARTQQFKEGRIPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
+DY A T YG G+KV++ + D +I +++
Sbjct: 180 DVDYALTEALTVYGKIGVKVWIFKEEVFGKRDLSINMGMGEPKQRE 225
>gi|67923589|ref|ZP_00517061.1| ribosomal protein S3 [Crocosphaera watsonii WH 8501]
gi|67854559|gb|EAM49846.1| ribosomal protein S3 [Crocosphaera watsonii WH 8501]
Length = 241
Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 100/230 (43%), Positives = 142/230 (61%), Gaps = 5/230 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+PI FRLG+ S W+A Y LL EDL +REY++ +L AG+A I IER
Sbjct: 1 MGQKIHPIGFRLGITKEHKSCWYADKKRYPELLQEDLVVREYIEKNLSNAGIADIRIERK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLIAQ 118
+ +++ARPG+++G+ G+ IE++R L N +I ++V EV + + +A LIA+
Sbjct: 61 ADQIDLAIHTARPGVVVGRGGSGIEQLRTGLQKALGENRQIRINVIEVARVDADAALIAE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
I QQLERRV FRR +++A+Q A R G+K+ GRLNGAE++R+E EGRVPL TL
Sbjct: 121 YIGQQLERRVSFRRVVRQAIQRAQRAEVKGIKIQVGGRLNGAEIARSEWVREGRVPLHTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST---IPAAEHRVVEK 225
RA IDY A+T YG GIKV++ + + + PA R +
Sbjct: 181 RADIDYCYRTAQTIYGILGIKVWIFKGEVIPGQEQEAMAAPAPTPRKKRR 230
>gi|160883058|ref|ZP_02064061.1| hypothetical protein BACOVA_01021 [Bacteroides ovatus ATCC 8483]
gi|237717405|ref|ZP_04547886.1| 30S ribosomal protein S3 [Bacteroides sp. D1]
gi|237718737|ref|ZP_04549218.1| 30S ribosomal protein S3 [Bacteroides sp. 2_2_4]
gi|260175422|ref|ZP_05761834.1| 30S ribosomal protein S3 [Bacteroides sp. D2]
gi|262406170|ref|ZP_06082720.1| ribosomal protein S3 [Bacteroides sp. 2_1_22]
gi|293372112|ref|ZP_06618503.1| ribosomal protein S3 [Bacteroides ovatus SD CMC 3f]
gi|294644065|ref|ZP_06721842.1| ribosomal protein S3 [Bacteroides ovatus SD CC 2a]
gi|298483070|ref|ZP_07001251.1| ribosomal protein S3 [Bacteroides sp. D22]
gi|299144618|ref|ZP_07037686.1| ribosomal protein S3 [Bacteroides sp. 3_1_23]
gi|315923652|ref|ZP_07919892.1| 30S ribosomal protein S3 [Bacteroides sp. D2]
gi|156111530|gb|EDO13275.1| hypothetical protein BACOVA_01021 [Bacteroides ovatus ATCC 8483]
gi|229443388|gb|EEO49179.1| 30S ribosomal protein S3 [Bacteroides sp. D1]
gi|229451869|gb|EEO57660.1| 30S ribosomal protein S3 [Bacteroides sp. 2_2_4]
gi|262357045|gb|EEZ06135.1| ribosomal protein S3 [Bacteroides sp. 2_1_22]
gi|292632904|gb|EFF51491.1| ribosomal protein S3 [Bacteroides ovatus SD CMC 3f]
gi|292640589|gb|EFF58830.1| ribosomal protein S3 [Bacteroides ovatus SD CC 2a]
gi|295085422|emb|CBK66945.1| SSU ribosomal protein S3P [Bacteroides xylanisolvens XB1A]
gi|298270814|gb|EFI12394.1| ribosomal protein S3 [Bacteroides sp. D22]
gi|298515109|gb|EFI38990.1| ribosomal protein S3 [Bacteroides sp. 3_1_23]
gi|313697527|gb|EFS34362.1| 30S ribosomal protein S3 [Bacteroides sp. D2]
Length = 243
Score = 236 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 99/221 (44%), Positives = 151/221 (68%), Gaps = 1/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ W+S W+ G++YG L ED KIR+YL L +A V++I+IERT
Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWY-GGNDYGDSLLEDSKIRKYLNARLAKASVSRIVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I V +ARPG+IIGK G +++K++++L +T+ +I +++ EV +PE++A ++A +I
Sbjct: 60 LKLVTITVCTARPGIIIGKGGQEVDKLKEELKKVTDKDIQINIFEVKRPELDAVIVANNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E ++ +RRA+K A+ + MR GA+G+K+ SGRLNGAE++R+E Y EGR PL T RA
Sbjct: 120 ARQVEGKIAYRRAIKMAIANTMRMGAEGIKIQISGRLNGAEMARSEMYKEGRTPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
IDY A A T G GIKV++ + + + +
Sbjct: 180 DIDYCHAEALTKVGLLGIKVWICRGEVFGKKELAPNFTQSK 220
>gi|29348130|ref|NP_811633.1| 30S ribosomal protein S3 [Bacteroides thetaiotaomicron VPI-5482]
gi|253569597|ref|ZP_04847007.1| 30S ribosomal protein S3 [Bacteroides sp. 1_1_6]
gi|298386186|ref|ZP_06995743.1| ribosomal protein S3 [Bacteroides sp. 1_1_14]
gi|61215767|sp|Q8A482|RS3_BACTN RecName: Full=30S ribosomal protein S3
gi|29340033|gb|AAO77827.1| 30S ribosomal protein S3 [Bacteroides thetaiotaomicron VPI-5482]
gi|251841616|gb|EES69697.1| 30S ribosomal protein S3 [Bacteroides sp. 1_1_6]
gi|298261414|gb|EFI04281.1| ribosomal protein S3 [Bacteroides sp. 1_1_14]
Length = 243
Score = 236 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 99/221 (44%), Positives = 151/221 (68%), Gaps = 1/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ W+S W+ G++YG L ED KIR+YL L +A V++I+IERT
Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWY-GGNDYGDSLLEDSKIRKYLNARLAKASVSRIVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I V +ARPG+IIGK G +++K++++L +T+ +I +++ EV +PE++A ++A +I
Sbjct: 60 LKLVTITVCTARPGIIIGKGGQEVDKLKEELKKVTDKDIQINIFEVKRPELDAVIVANNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E ++ +RRA+K A+ + MR GA+G+K+ SGRLNGAE++R+E Y EGR PL T RA
Sbjct: 120 ARQVEGKIAYRRAIKMAIANTMRMGAEGIKIQISGRLNGAEMARSEMYKEGRTPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
IDY A A T G GIKV++ + + + +
Sbjct: 180 DIDYCHAEALTKVGLLGIKVWICRGEVFGKKELAPNFTQSK 220
>gi|88803744|ref|ZP_01119268.1| putative 30S ribosomal protein S3 [Polaribacter irgensii 23-P]
gi|88780477|gb|EAR11658.1| putative 30S ribosomal protein S3 [Polaribacter irgensii 23-P]
Length = 242
Score = 236 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 98/216 (45%), Positives = 150/216 (69%), Gaps = 2/216 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ W S W+ G++YG L ED KIREY+ L +A V++++IERT
Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDRLAEDFKIREYVNARLSKASVSRVIIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + + +ARPG+IIGK GT+++K++++L +T E+ +++ E+ +PE+++ L+A S+
Sbjct: 60 LKLVTVTITTARPGIIIGKGGTEVDKLKEELKKITGKEVQINIFEIKRPELDSKLVAVSV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E R+ ++RA+K A+Q+ MR A+G+K+ SGRLNGAE++R+E + EGR+PL T RA
Sbjct: 120 ARQIENRISYKRAIKMAIQATMRMNAEGIKIQISGRLNGAEMARSEHFKEGRIPLSTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
IDY A T YG GIKV++ + EV P
Sbjct: 180 DIDYSLVEAHTTYGRLGIKVWIM-KGEVYGKRELSP 214
>gi|153805963|ref|ZP_01958631.1| hypothetical protein BACCAC_00208 [Bacteroides caccae ATCC 43185]
gi|255690009|ref|ZP_05413684.1| ribosomal protein S3 [Bacteroides finegoldii DSM 17565]
gi|149130640|gb|EDM21846.1| hypothetical protein BACCAC_00208 [Bacteroides caccae ATCC 43185]
gi|260624617|gb|EEX47488.1| ribosomal protein S3 [Bacteroides finegoldii DSM 17565]
Length = 243
Score = 236 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 99/221 (44%), Positives = 151/221 (68%), Gaps = 1/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ W+S W+ G++YG L ED KIR+YL L +A V++I+IERT
Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWY-GGNDYGDSLLEDSKIRKYLNARLAKASVSRIVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I V +ARPG+IIGK G +++K++++L +T+ +I +++ EV +PE++A ++A +I
Sbjct: 60 LKLVTITVCTARPGIIIGKGGQEVDKLKEELKKVTDKDIQINIFEVKRPELDAVIVANNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E ++ +RRA+K A+ + MR GA+G+K+ SGRLNGAE++R+E Y EGR PL T RA
Sbjct: 120 ARQVEGKIAYRRAIKMAIANTMRMGAEGIKIQISGRLNGAEMARSEMYKEGRTPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
IDY A A T G GIKV++ + + + +
Sbjct: 180 DIDYCHAEALTKVGLLGIKVWICRGEVFGKRELAPNFTQSK 220
>gi|53715460|ref|YP_101452.1| 30S ribosomal protein S3 [Bacteroides fragilis YCH46]
gi|60683432|ref|YP_213576.1| 30S ribosomal protein S3 [Bacteroides fragilis NCTC 9343]
gi|253566676|ref|ZP_04844129.1| 30S ribosomal protein S3 [Bacteroides sp. 3_2_5]
gi|255011652|ref|ZP_05283778.1| 30S ribosomal protein S3 [Bacteroides fragilis 3_1_12]
gi|265767554|ref|ZP_06095220.1| ribosomal protein S3 [Bacteroides sp. 2_1_16]
gi|313149489|ref|ZP_07811682.1| 30S ribosomal protein S3 [Bacteroides fragilis 3_1_12]
gi|61215468|sp|Q64NL4|RS3_BACFR RecName: Full=30S ribosomal protein S3
gi|81313520|sp|Q5L8B5|RS3_BACFN RecName: Full=30S ribosomal protein S3
gi|52218325|dbj|BAD50918.1| 30S ribosomal protein S3 [Bacteroides fragilis YCH46]
gi|60494866|emb|CAH09673.1| putative 30S ribosomal protein S3 [Bacteroides fragilis NCTC 9343]
gi|251944848|gb|EES85323.1| 30S ribosomal protein S3 [Bacteroides sp. 3_2_5]
gi|263252859|gb|EEZ24371.1| ribosomal protein S3 [Bacteroides sp. 2_1_16]
gi|301164917|emb|CBW24478.1| putative 30S ribosomal protein S3 [Bacteroides fragilis 638R]
gi|313138256|gb|EFR55616.1| 30S ribosomal protein S3 [Bacteroides fragilis 3_1_12]
Length = 244
Score = 236 bits (601), Expect = 3e-60, Method: Composition-based stats.
Identities = 99/221 (44%), Positives = 151/221 (68%), Gaps = 1/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ W+S W+ G++YG L ED KIR+YL L +A V++I+IERT
Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWY-GGNDYGDSLLEDSKIRKYLNARLAKASVSRIVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I V +ARPG+IIGK G +++K++++L +T+ +I +++ EV +PE++A ++A +I
Sbjct: 60 LKLVTITVCTARPGIIIGKGGQEVDKLKEELKKVTDKDIQINIFEVKRPELDAVIVANNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E ++ +RRA+K A+ + MR GA+G+K+ SGRLNGAE++R+E Y EGR PL T RA
Sbjct: 120 ARQVEGKIAYRRAIKMAIANTMRMGAEGIKIQISGRLNGAEMARSEMYKEGRTPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
IDY A A T G GIKV++ + + + +
Sbjct: 180 DIDYCHAEALTKVGLLGIKVWICRGEVFGKRELAPNFTQSK 220
>gi|150025401|ref|YP_001296227.1| 30S ribosomal protein S3 [Flavobacterium psychrophilum JIP02/86]
gi|189045008|sp|A6GZ93|RS3_FLAPJ RecName: Full=30S ribosomal protein S3
gi|149771942|emb|CAL43416.1| 30S ribosomal protein S3 [Flavobacterium psychrophilum JIP02/86]
Length = 253
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 98/212 (46%), Positives = 150/212 (70%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ W+S W+ G++YG + ED KIR+Y+ L +A V+K++IERT
Sbjct: 1 MGQKTNPIGNRLGIIRGWDSNWY-GGNDYGDKIAEDYKIRKYIHARLSKASVSKVIIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + + +ARPG+IIGK G +++K++++L +T+ E+ +++ E+ +PE++A L+A SI
Sbjct: 60 LKLVTVTITTARPGIIIGKGGQEVDKLKEELKKVTDKEVQINIFEIKRPELDAFLVATSI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
+Q+E R+ +RRA+K A+ ++MR A+G+KV+ SGRLNGAE++R+E + EGRVPL T RA
Sbjct: 120 CRQIESRISYRRAIKMAIAASMRMNAEGIKVLISGRLNGAEMARSEGFKEGRVPLSTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
IDY A A T YG GIKV++ + D
Sbjct: 180 DIDYALAEAHTTYGRMGIKVWIMKGEVYGKRD 211
>gi|218440629|ref|YP_002378958.1| 30S ribosomal protein S3 [Cyanothece sp. PCC 7424]
gi|226697694|sp|B7KHZ3|RS3_CYAP7 RecName: Full=30S ribosomal protein S3
gi|218173357|gb|ACK72090.1| ribosomal protein S3 [Cyanothece sp. PCC 7424]
Length = 240
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 103/228 (45%), Positives = 146/228 (64%), Gaps = 2/228 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P+ FRLG+ SRWFA Y LL ED KIR+Y++ +L AG++ I IER
Sbjct: 1 MGQKIHPVGFRLGITKEHKSRWFADKYHYPELLQEDRKIRQYVEKNLSNAGISDIRIERK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLIAQ 118
I +++ARPG+++G+ G+ IE +R L N + +I ++V EV + + +ATLIA+
Sbjct: 61 ADQVDIEIHTARPGVVVGRGGSGIEALRVGLQNALGGHRQIRINVVEVARVDADATLIAE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
IAQQLERRV FRR +++A+Q A R G+KV SGRLNGAE++RTE EGRVPL TL
Sbjct: 121 YIAQQLERRVSFRRVVRQAIQRAQRAEVKGIKVQVSGRLNGAEIARTEWIREGRVPLHTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
RA ID+ A+T YG G+K++V + + + PA ++
Sbjct: 181 RADIDFAYRTAKTIYGILGVKIWVFKGEIIPGQEEQAPAQPATTPKRQ 228
>gi|269925837|ref|YP_003322460.1| ribosomal protein S3 [Thermobaculum terrenum ATCC BAA-798]
gi|269789497|gb|ACZ41638.1| ribosomal protein S3 [Thermobaculum terrenum ATCC BAA-798]
Length = 226
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 99/224 (44%), Positives = 151/224 (67%), Gaps = 2/224 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG+K+NPI FRLG TW SRWFA Y LHED+KIR + L AG++ ++I R+
Sbjct: 1 MGRKVNPIGFRLGGIKTWESRWFAE-RNYTQQLHEDIKIRSTVFNRLSNAGISHVVISRS 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ + VY+A+PG++IGK G ++ +R +L NMT ++ L++ EV +PE++A L+A SI
Sbjct: 60 GDDLNVTVYTAKPGVVIGKGGATVDALRTELENMTGKKVTLNIEEVRQPELDAQLVADSI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNG-AELSRTECYLEGRVPLQTLR 179
A+Q+ +RV ++RAMK+AVQ AMR GA G+K+ SG + G + +SR+ ++GRVPLQT+R
Sbjct: 120 AEQISKRVSYKRAMKQAVQRAMRAGAKGIKIRVSGLVGGPSSMSRSIVEIDGRVPLQTIR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223
A IDY A T G G+KV++ D + +++++ AA +V
Sbjct: 180 ADIDYAQVHAYTPGGRIGVKVWIYKGDVLPEAETSGQAATTELV 223
>gi|228472293|ref|ZP_04057059.1| ribosomal protein S3 [Capnocytophaga gingivalis ATCC 33624]
gi|228276496|gb|EEK15220.1| ribosomal protein S3 [Capnocytophaga gingivalis ATCC 33624]
Length = 243
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 100/216 (46%), Positives = 147/216 (68%), Gaps = 2/216 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ W S W+ G++YG L ED KIR+Y+ L +A V++++IERT
Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDKLAEDDKIRKYVHTRLAKASVSRVIIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + + ++RPG IIGK G +++K+R++L +T +I +++ E+ +PE++A L+A SI
Sbjct: 60 LKLVTVTITTSRPGSIIGKGGQEVDKLREELKKITGKDIQINIFEIKRPELDAPLVAASI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E R+ +RRA+K A+ + MR A+G+K+ SGRLNGAE++R E Y EGR+PL T RA
Sbjct: 120 ARQIENRISYRRAIKMAIAATMRMNAEGIKIQISGRLNGAEMARNESYKEGRIPLSTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
IDY T A T YG GIKV++ + EV P
Sbjct: 180 DIDYATDEAHTTYGRMGIKVWIM-KGEVYGKRELSP 214
>gi|313891562|ref|ZP_07825172.1| ribosomal protein S3 [Dialister microaerophilus UPII 345-E]
gi|313120021|gb|EFR43203.1| ribosomal protein S3 [Dialister microaerophilus UPII 345-E]
Length = 249
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 104/217 (47%), Positives = 146/217 (67%), Gaps = 1/217 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+GV WNS+WFA Y A L ED KIR++L+ HL AG++KI I+R
Sbjct: 1 MGQKVNPHGMRVGVINDWNSKWFAE-KNYAAQLVEDTKIRQFLKKHLFVAGISKIGIKRV 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I +Y+A+PG++IG+ GT IE I+K L +T+ EI + + E+ +++A L+ ++I
Sbjct: 60 GNRVKIAIYTAKPGMVIGRGGTGIEDIKKALKIVTDKEIDIDILEIKSSDLSAILVGENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLERR+ FRRA+K+AV MR GA GVKV SGRL GAE++ +E Y EG +PLQTLRA
Sbjct: 120 ASQLERRIGFRRAVKQAVGRTMRSGAKGVKVTVSGRLGGAEIAHSESYREGSIPLQTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
+IDYG +VA T +G+ GIKV++ +
Sbjct: 180 NIDYGVSVAHTTFGAIGIKVWIYKGELAPGQMVDEAE 216
>gi|162446963|ref|YP_001620095.1| 30S ribosomal protein S3 [Acholeplasma laidlawii PG-8A]
gi|189044988|sp|A9NED9|RS3_ACHLI RecName: Full=30S ribosomal protein S3
gi|161985070|gb|ABX80719.1| small subunit ribosomal protein S3 [Acholeplasma laidlawii PG-8A]
Length = 256
Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats.
Identities = 98/215 (45%), Positives = 139/215 (64%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+W+A + AL+ ED IRE+L + +AGV++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESKWYADQKDVPALIKEDALIREFLNENFSKAGVSQIEIERV 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
+ + I +Y ++PG+ +GK+ + K L +T E+ L++ EV +PE A L+
Sbjct: 61 KAKSKERVTIKLYVSKPGIALGKEASVKNKAVSTLEYLTKKEVILNIIEVRRPEKVAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQSIA+QLE R FRRA K A+Q A++ GA G++ + SGRL GAE++R+E Y EGRVPL
Sbjct: 121 AQSIAEQLENRASFRRAQKMAIQRALKSGAKGIRTLVSGRLGGAEMARSEGYSEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA +DY TA A+T YG GIKV++ + +
Sbjct: 181 TLRADVDYATAEAKTTYGILGIKVWIYHGEVLPGQ 215
>gi|299141153|ref|ZP_07034290.1| ribosomal protein S3 [Prevotella oris C735]
gi|298577113|gb|EFI48982.1| ribosomal protein S3 [Prevotella oris C735]
Length = 241
Score = 235 bits (600), Expect = 4e-60, Method: Composition-based stats.
Identities = 99/222 (44%), Positives = 147/222 (66%), Gaps = 1/222 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ W+S WF G +G L ED KIR+YL L +A V++I+IERT
Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWF-GGKNFGDNLVEDCKIRKYLNERLAKASVSRIVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I + +ARPG++IGK G D++K++++L + +I +++ EV KPE++A ++A +I
Sbjct: 60 LKLVTITICTARPGIVIGKGGQDVDKLKEELKKLYKKDIQINIFEVKKPELDANIVANNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E ++ +RRA+K AVQ+ MR GA+G+KV +GRLNGAE++R E + EGR PL T RA
Sbjct: 120 ARQVEGKISYRRAIKMAVQNTMRAGAEGIKVQITGRLNGAEMARKEMFKEGRTPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
IDY A T G GIKV++ + + T + +
Sbjct: 180 DIDYCATEALTKVGLLGIKVWICRGEVYGKRELTPNFTQEKQ 221
>gi|145219067|ref|YP_001129776.1| 30S ribosomal protein S3 [Prosthecochloris vibrioformis DSM 265]
gi|145205231|gb|ABP36274.1| SSU ribosomal protein S3P [Chlorobium phaeovibrioides DSM 265]
Length = 251
Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats.
Identities = 104/226 (46%), Positives = 152/226 (67%), Gaps = 2/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLK--QAGVAKILIE 58
MGQK+NP FRLG+ W SRW+ + +D IR Y+Q LK +AG+A+I+IE
Sbjct: 1 MGQKVNPTGFRLGIIRDWTSRWYDDSPVISEKIKQDQVIRNYVQTRLKREKAGIARIIIE 60
Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118
RT+KN RI +Y+ARPG ++G+KG +I + ++L +T E+ + V EV KPEI + LI +
Sbjct: 61 RTNKNIRINIYAARPGAVVGRKGEEINNLSQELGRITGKEVKIDVVEVVKPEIESQLIGE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
+IA QLE RV FRRAMK+A+Q+AMR GA+GV++ +GRL GAE++R E Y EG++PL T+
Sbjct: 121 NIAYQLENRVSFRRAMKQAIQTAMRAGAEGVRIRCAGRLGGAEIARAEQYKEGKIPLHTI 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
RA++DY + A T G+ GIKV+V + + I E + ++
Sbjct: 181 RANVDYASVTAHTIAGTIGIKVWVYKGEVLVQRIDAIEEEEMKRIK 226
>gi|224023624|ref|ZP_03641990.1| hypothetical protein BACCOPRO_00331 [Bacteroides coprophilus DSM
18228]
gi|224016846|gb|EEF74858.1| hypothetical protein BACCOPRO_00331 [Bacteroides coprophilus DSM
18228]
Length = 244
Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats.
Identities = 100/225 (44%), Positives = 151/225 (67%), Gaps = 1/225 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ W+S W+ G YG L ED KIR+YL L +A V++I+IERT
Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWY-GGKNYGDALLEDSKIRKYLNARLAKASVSRIVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I V +ARPG+IIGK G +++K++++L +T+ +I +++ EV +PE++A ++A +I
Sbjct: 60 LKLVTITVCTARPGIIIGKGGQEVDKLKEELKKITDKDIQINIFEVKRPELDAVIVANNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E ++ +RRA+K A+ + MR GA+G+K++ SGRLNGAE++R+E Y EGR PL T RA
Sbjct: 120 ARQVEGKIAYRRAIKMAIANTMRMGAEGIKILISGRLNGAEMARSEMYKEGRTPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY A A T G GIKV++ + D + + +
Sbjct: 180 DIDYCHAEALTKVGLLGIKVWICRGEVYGKRDLAPNFTQSKETSR 224
>gi|320108390|ref|YP_004183980.1| 30S ribosomal protein S3 [Terriglobus saanensis SP1PR4]
gi|319926911|gb|ADV83986.1| ribosomal protein S3 [Terriglobus saanensis SP1PR4]
Length = 222
Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats.
Identities = 102/214 (47%), Positives = 147/214 (68%), Gaps = 1/214 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLGVN W SRWF + LL ED+K++ L+ LK AGV+ + IER
Sbjct: 1 MGQKVHPYGFRLGVNKPWKSRWFVE-RGFDKLLVEDVKLKAELREKLKAAGVSSVEIERP 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+I+ +ARPG+IIG+KG +I+K++ + T+ E+ + + EV KPE++A L++++I
Sbjct: 60 GNKLRLIIKTARPGIIIGRKGAEIDKLKADIQKRTSREVFIDILEVNKPELDAQLVSENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+RV FRRAM+++V SA+RFG G+KV SGRLNG E++R+E YL+GR+PL TLRA
Sbjct: 120 ALQLEKRVSFRRAMRKSVDSALRFGCKGIKVRVSGRLNGNEIARSEWYLQGRLPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
IDYG + A T +G G+K +V +
Sbjct: 180 DIDYGFSEAHTTFGIIGVKTWVYKGEIYEQKKRR 213
>gi|295099231|emb|CBK88320.1| SSU ribosomal protein S3P [Eubacterium cylindroides T2-87]
Length = 273
Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats.
Identities = 96/240 (40%), Positives = 142/240 (59%), Gaps = 14/240 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ----------- 49
MGQK++PI R+GV W SRW+A E+G LL ED+KIRE+++ + +
Sbjct: 1 MGQKVSPIGMRVGVIRDWQSRWYADDKEFGTLLMEDVKIREFIESYYAKLSNEAQDKRKA 60
Query: 50 -AGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVP 107
+++I IERT +I+ +A PG++IG+ G IE ++KK+ M + + ++V EV
Sbjct: 61 DPQISRIEIERTKGRMTVIIRTAHPGVVIGQDGKSIEGLKKKIEKMASAKNVQINVVEVA 120
Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTEC 167
P ++A L+A+ IA +LE R FR K+A+Q+ MR GA G+K SGRL GA+++RTE
Sbjct: 121 NPNLDARLVARWIANELEARKSFRATQKKAIQNTMRAGAKGIKTAVSGRLGGADMARTEG 180
Query: 168 YLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH-RVVEKD 226
Y EG VPL TLR+ IDY A T YG G+KV++ + + P A R + K
Sbjct: 181 YSEGVVPLHTLRSDIDYAWEEASTTYGRLGVKVWICRGEVLPGEMVKEPEAPKQRPMRKG 240
>gi|19704960|ref|NP_602455.1| SSU ribosomal protein S3P [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|34764032|ref|ZP_00144918.1| SSU ribosomal protein S3P [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|237739372|ref|ZP_04569853.1| SSU ribosomal protein S3P [Fusobacterium sp. 2_1_31]
gi|237742666|ref|ZP_04573147.1| SSU ribosomal protein S3P [Fusobacterium sp. 4_1_13]
gi|237743905|ref|ZP_04574386.1| SSU ribosomal protein S3P [Fusobacterium sp. 7_1]
gi|256027484|ref|ZP_05441318.1| SSU ribosomal protein S3P [Fusobacterium sp. D11]
gi|256846061|ref|ZP_05551519.1| ribosomal protein S3 [Fusobacterium sp. 3_1_36A2]
gi|260495197|ref|ZP_05815325.1| ribosomal protein S3 [Fusobacterium sp. 3_1_33]
gi|289765446|ref|ZP_06524824.1| SSU ribosomal protein S3P [Fusobacterium sp. D11]
gi|294784808|ref|ZP_06750096.1| ribosomal protein S3 [Fusobacterium sp. 3_1_27]
gi|296329214|ref|ZP_06871715.1| 30S ribosomal protein S3 [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
gi|27734504|sp|Q8RIG1|RS3_FUSNN RecName: Full=30S ribosomal protein S3
gi|19712862|gb|AAL93754.1| SSU ribosomal protein S3P [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|27886196|gb|EAA23486.1| SSU ribosomal protein S3P [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|229422980|gb|EEO38027.1| SSU ribosomal protein S3P [Fusobacterium sp. 2_1_31]
gi|229430314|gb|EEO40526.1| SSU ribosomal protein S3P [Fusobacterium sp. 4_1_13]
gi|229432936|gb|EEO43148.1| SSU ribosomal protein S3P [Fusobacterium sp. 7_1]
gi|256719620|gb|EEU33175.1| ribosomal protein S3 [Fusobacterium sp. 3_1_36A2]
gi|260197254|gb|EEW94773.1| ribosomal protein S3 [Fusobacterium sp. 3_1_33]
gi|289717001|gb|EFD81013.1| SSU ribosomal protein S3P [Fusobacterium sp. D11]
gi|294486522|gb|EFG33884.1| ribosomal protein S3 [Fusobacterium sp. 3_1_27]
gi|296153570|gb|EFG94387.1| 30S ribosomal protein S3 [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
Length = 219
Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats.
Identities = 87/219 (39%), Positives = 141/219 (64%), Gaps = 2/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ W+S W+A EY HED++I+E+++ + G++K+ IERT
Sbjct: 1 MGQKVDPRGLRLGITRAWDSNWYADKKEYVKYFHEDVQIKEFIKKNYFHTGISKVRIERT 60
Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
+ +++ + GLIIG+KG +I+ +R KL +T ++ + V E+ +A L+A+S
Sbjct: 61 SPSQVVVHIHTGKAGLIIGRKGAEIDALRAKLEKLTGKKVTVKVQEIKDLNGDAVLVAES 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMR-FGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
IA Q+E+R+ +++AM +A+ +M+ G+KV+ SGRLNGAE++R+E +EG+VPL TL
Sbjct: 121 IAAQIEKRIAYKKAMTQAISRSMKSPEVKGIKVMISGRLNGAEIARSEWAVEGKVPLHTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
RA IDY A A T YG+ GIKV++ + + A
Sbjct: 181 RADIDYAVATAHTTYGALGIKVWIFHGEVLPSKKEGGEA 219
>gi|288925709|ref|ZP_06419641.1| ribosomal protein S3 [Prevotella buccae D17]
gi|315606498|ref|ZP_07881513.1| 30S ribosomal protein S3 [Prevotella buccae ATCC 33574]
gi|288337647|gb|EFC76001.1| ribosomal protein S3 [Prevotella buccae D17]
gi|315251904|gb|EFU31878.1| 30S ribosomal protein S3 [Prevotella buccae ATCC 33574]
Length = 242
Score = 235 bits (599), Expect = 5e-60, Method: Composition-based stats.
Identities = 102/220 (46%), Positives = 148/220 (67%), Gaps = 1/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ W+S WF G +G + ED KIR+YL L +A V++I+IERT
Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWF-GGKNFGDNIVEDQKIRKYLNERLAKASVSRIVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I + +ARPG++IGK G D++K++++L N+ + EI +++ EV KPE++AT++A +I
Sbjct: 60 LKLVTITICTARPGIVIGKGGQDVDKLKEELKNIFDKEIQINIFEVKKPELDATIVANNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E ++ +RRA+K A+ + MR GA+G+KV SGRLNGAE++R E EGR PL T RA
Sbjct: 120 ARQVEGKIAYRRAIKMAIANTMRAGAEGIKVQISGRLNGAEIARKEMLKEGRTPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
IDY A A T G GIKV++ + D T +
Sbjct: 180 DIDYCQAEALTKVGLLGIKVWICRGEVYGKRDLTPNFTQD 219
>gi|332042714|gb|EGI78914.1| ribosomal protein S3 [Lacinutrix algicola 5H-3-7-4]
Length = 240
Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats.
Identities = 97/216 (44%), Positives = 147/216 (68%), Gaps = 2/216 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ W S W+ G++YG L ED KIR+Y+ L +A V++++IERT
Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDKLAEDDKIRKYVHARLSKASVSRVIIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + + +ARPG+IIGK G +++K++++L +T E+ +++ E+ +PE++A L+ SI
Sbjct: 60 LKLVTVTITTARPGIIIGKGGQEVDKLKEELKKITGKEVQINIFEIKRPELDAFLVGTSI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E R+ +RRA+K A+ + MR A+G+K+ SGRLNGAE++R+E Y EGR+PL T RA
Sbjct: 120 ARQIENRISYRRAIKMAIAATMRMNAEGIKIQISGRLNGAEMARSEHYKEGRIPLSTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
IDY A T YG G+KV++ + EV P
Sbjct: 180 DIDYALVEAHTTYGRLGVKVWIM-KGEVYGKRELSP 214
>gi|60117156|ref|YP_209490.1| ribosomal protein S3 [Huperzia lucidula]
gi|68052893|sp|Q5SD19|RR3_HUPLU RecName: Full=30S ribosomal protein S3, chloroplastic
gi|50659964|gb|AAT80686.1| ribosomal protein S3 [Huperzia lucidula]
Length = 219
Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats.
Identities = 84/219 (38%), Positives = 127/219 (57%), Gaps = 12/219 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG+ NS WFA+ + Y L ED K+R + ++ + GV
Sbjct: 1 MGQKINPLGFRLGITKNHNSHWFAKPNNYSEFLQEDRKVRNCIDNYVHRHVKNSSNYGGV 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLS----NMTNSEIHLSVNEVPK 108
A++ I+R + +++ P L++ G IE+IRK + + +H++ E+ K
Sbjct: 61 ARVEIQRKTDLILVEIHTGFPALLVESHGQGIEQIRKDVQQNLLDSKIRRVHVTSTEIAK 120
Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168
P ++A+ IA QLE RV FRR +++A++ A G+K+ +GRLNG E++R E
Sbjct: 121 PYGEPNILAEYIAIQLENRVAFRRTIRKAIELAKETDIKGIKIQIAGRLNGTEIARVEWA 180
Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQTLRA IDY A+T YG GIK+++ +E
Sbjct: 181 REGRVPLQTLRAQIDYCYYPAQTIYGVLGIKIWIFRDEE 219
>gi|159028200|emb|CAO89807.1| rpsC [Microcystis aeruginosa PCC 7806]
Length = 242
Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats.
Identities = 99/220 (45%), Positives = 138/220 (62%), Gaps = 2/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P+ FRLGV S W+A Y L+ ED +IR Y++ +L AG+A I IER
Sbjct: 1 MGQKIHPLGFRLGVIKDHKSCWYADAKRYPELVQEDRRIRNYVEKNLANAGIADIRIERK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN--SEIHLSVNEVPKPEINATLIAQ 118
I +++ARPG+++G+ GT IE++R L +I ++V EV + + +A LIA+
Sbjct: 61 ADQVDISIHTARPGVVVGRGGTGIEQLRLGLQKALGGQRQIRINVIEVARVDADANLIAE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
IAQQLERRV FRR +++A+Q A R G+K+ SGRLNGAE++RTE EGRVPL TL
Sbjct: 121 YIAQQLERRVSFRRVVRQAIQRAQRAEVKGIKIQVSGRLNGAEIARTEWVREGRVPLHTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
RA IDY A T YG G+KV++ + + + A
Sbjct: 181 RADIDYSYKTASTIYGILGVKVWIFKGEIIPGQEEIAAAV 220
>gi|254303414|ref|ZP_04970772.1| ribosomal protein S3 [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
gi|148323606|gb|EDK88856.1| ribosomal protein S3 [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
Length = 219
Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats.
Identities = 87/219 (39%), Positives = 141/219 (64%), Gaps = 2/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ W+S W+A EY HED++I+E+++ + G++K+ IERT
Sbjct: 1 MGQKVDPRGLRLGITRAWDSNWYADKKEYVKYFHEDVQIKEFIKKNYFHTGISKVRIERT 60
Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
+ +++ + GLIIG+KG +I+ +R KL +T ++ + V E+ +A L+A+S
Sbjct: 61 SPSQVVVHIHTGKAGLIIGRKGAEIDALRTKLEKLTGKKVTVKVQEIKDLNGDAVLVAES 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMR-FGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
IA Q+E+R+ +++AM +A+ +M+ G+KV+ SGRLNGAE++R+E +EG+VPL TL
Sbjct: 121 IAAQIEKRIAYKKAMTQAISRSMKSPEVKGIKVMISGRLNGAEIARSEWAVEGKVPLHTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
RA IDY A A T YG+ GIKV++ + + A
Sbjct: 181 RADIDYAVATAHTTYGALGIKVWIFHGEVLPSKKEGGEA 219
>gi|34541535|ref|NP_906014.1| 30S ribosomal protein S3 [Porphyromonas gingivalis W83]
gi|188995726|ref|YP_001929978.1| 30S ribosomal protein S3 [Porphyromonas gingivalis ATCC 33277]
gi|61215670|sp|Q7MTL9|RS3_PORGI RecName: Full=30S ribosomal protein S3
gi|226697744|sp|B2RLY6|RS3_PORG3 RecName: Full=30S ribosomal protein S3
gi|34397852|gb|AAQ66913.1| ribosomal protein S3 [Porphyromonas gingivalis W83]
gi|188595406|dbj|BAG34381.1| 30S ribosomal protein S3 [Porphyromonas gingivalis ATCC 33277]
Length = 246
Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats.
Identities = 101/216 (46%), Positives = 152/216 (70%), Gaps = 2/216 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP+ RLG+ W+S W+ G +YG L ED +IR+YL L +A V++I+IER
Sbjct: 1 MGQKINPVSNRLGIIRGWDSNWY-GGRKYGETLLEDSRIRQYLNARLAKASVSRIVIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I + +ARPG+IIGK G +++K++++L +T ++ +++ E+ KPE++A ++A++I
Sbjct: 60 LKLVTITICTARPGMIIGKAGQEVDKLKEELKRITKKDVQINIYEIRKPELDAAIVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE ++ +RRA+K A+ SAMR GA+G+K+ SGRLNGAE++R+E + EGR PL TLRA
Sbjct: 120 ARQLEGKIAYRRAVKMAIASAMRMGAEGIKIQVSGRLNGAEMARSEMFKEGRTPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
IDY A A T G GIKV++ + EV + P
Sbjct: 180 DIDYALAEALTKVGLLGIKVWIC-KGEVYEKRDLAP 214
>gi|126657994|ref|ZP_01729146.1| 30S ribosomal protein S3 [Cyanothece sp. CCY0110]
gi|126620632|gb|EAZ91349.1| 30S ribosomal protein S3 [Cyanothece sp. CCY0110]
Length = 241
Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats.
Identities = 101/230 (43%), Positives = 142/230 (61%), Gaps = 5/230 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+PI FRLGV S W+A Y LL EDL IR+Y++ +L AG+A I I+R
Sbjct: 1 MGQKIHPIGFRLGVTKEHKSCWYADKRRYPELLQEDLAIRQYVEKNLSNAGIADIRIQRK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLIAQ 118
+ +++ARPG+++G+ G+ IE++R L N +I ++V EV + + +A LIA+
Sbjct: 61 ADQIDLAIHTARPGVVVGRGGSGIEQLRTGLQQTLGENRQIRINVIEVSRVDADAALIAE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
I QQLERRV FRR +++A+Q A R G+K+ GRLNGAE++R+E EGRVPL TL
Sbjct: 121 YITQQLERRVSFRRVVRQAIQRAQRAEVKGIKIQVGGRLNGAEIARSEWVREGRVPLHTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST---IPAAEHRVVEK 225
RA IDY A+T YG G+KV+V + + D PA R +
Sbjct: 181 RADIDYAYRTAQTIYGILGVKVWVFKGEIIPGQDEQAMAAPAPTPRKKRR 230
>gi|317503974|ref|ZP_07961982.1| 30S ribosomal protein S3 [Prevotella salivae DSM 15606]
gi|315665000|gb|EFV04659.1| 30S ribosomal protein S3 [Prevotella salivae DSM 15606]
Length = 241
Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats.
Identities = 100/223 (44%), Positives = 148/223 (66%), Gaps = 1/223 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ W+S WF G +G L ED KIR+YL L +A V++I+IERT
Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWF-GGKNFGDNLVEDRKIRKYLNERLAKASVSRIVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I + +ARPG++IGK G D++K++++L + +I +++ EV KPE++A ++A +I
Sbjct: 60 LKLVTITICTARPGIVIGKGGQDVDKLKEELKKLYKKDIQINIFEVKKPELDANIVANNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E ++ +RRA+K AVQ+ MR GA+G+KV +GRLNGAE++R E + EGR PL T RA
Sbjct: 120 ARQVEGKISYRRAIKMAVQNTMRAGAEGIKVQITGRLNGAEMARKEMFKEGRTPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223
IDY A T G GIKV++ + + T + + V
Sbjct: 180 DIDYCATEALTKVGLLGIKVWICRGEVYGKRELTPNFTQEKQV 222
>gi|332178461|gb|AEE14150.1| ribosomal protein S3 [Thermodesulfobium narugense DSM 14796]
Length = 245
Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats.
Identities = 98/210 (46%), Positives = 143/210 (68%), Gaps = 4/210 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+G+ + WFA S +G L +D KIR++++ L A V+K+LIER
Sbjct: 1 MGQKVHPNGLRVGITKDHITHWFAPKSNFGPDLVQDFKIRQFIKKELSSAFVSKVLIERR 60
Query: 61 H----KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
+ ++IV +ARPG++IG+ G E +RKKL + S I + V ++P P+++A LI
Sbjct: 61 GSKGQEKIKVIVRTARPGMVIGRGGQGREILRKKLVDEFKSNIEVDVEDIPVPDLDAQLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
A+++A Q+E+RV FRRAMK+A+ A R GA G+K++ GRL GAE++R+E EGRVPLQ
Sbjct: 121 AENVASQIEKRVTFRRAMKQAIFRARRSGAKGIKIMVGGRLGGAEVARSEWLREGRVPLQ 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
TLRA IDYG A A T YG G+KV++ + D
Sbjct: 181 TLRADIDYGFAEAHTIYGIIGVKVWLYVND 210
>gi|305665131|ref|YP_003861418.1| putative 30S ribosomal protein S3 [Maribacter sp. HTCC2170]
gi|88709883|gb|EAR02115.1| putative 30S ribosomal protein S3 [Maribacter sp. HTCC2170]
Length = 239
Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats.
Identities = 102/216 (47%), Positives = 150/216 (69%), Gaps = 2/216 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ W S W+ G++YG L ED KIR+Y+ L +A V++++IERT
Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDKLAEDDKIRKYIHARLSKASVSRVIIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + V +ARPG+IIGK G +++K++++L +TN E+ +++ E+ +PE++A L+A SI
Sbjct: 60 LKLITVTVTTARPGIIIGKGGQEVDKLKEELKKITNKEVQINIYEIKRPEVDANLVAASI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E R+ FRRA+K ++ +AMR A+G+KV SGRLNGAE++R+E Y +GR+PL T RA
Sbjct: 120 ARQIESRISFRRAIKMSIAAAMRMNAEGIKVQISGRLNGAEMARSESYKDGRIPLSTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
IDY A T YG GIKV++ + EV P
Sbjct: 180 DIDYALHEAHTTYGRLGIKVWIM-KGEVYGKRELSP 214
>gi|124112119|ref|YP_001019089.1| ribosomal protein S3 [Chlorokybus atmophyticus]
gi|152060532|sp|Q19VB0|RR3_CHLAT RecName: Full=30S ribosomal protein S3, chloroplastic
gi|124012226|gb|ABD62251.2| ribosomal protein S3 [Chlorokybus atmophyticus]
Length = 217
Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats.
Identities = 96/213 (45%), Positives = 139/213 (65%), Gaps = 2/213 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P+ FRLG+ S WFA+ ++Y LL ED IR +L+ L AG+A+I I+R
Sbjct: 1 MGQKIHPLGFRLGITQDHRSHWFAKPAQYRQLLQEDNSIRNFLRTKLINAGIARIDIQRK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKK--LSNMTNSEIHLSVNEVPKPEINATLIAQ 118
I V +ARPGLI+G+ G +E + + +++ +P+P++ +TLIA+
Sbjct: 61 ADQVEIEVRTARPGLIVGRSGKGVENLLRDLQEQFKNKRRFRITITYIPEPDLESTLIAE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
IAQ+LE R FRRAM++A+Q A R G +G+K+ +GRLNGAE++R+E EGRVPLQTL
Sbjct: 121 FIAQRLEARAPFRRAMRQAIQRATRAGVEGIKIQVAGRLNGAEIARSEWVREGRVPLQTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
RA+IDY A+T YG GIKV++ ++ S
Sbjct: 181 RANIDYSYCQAKTIYGILGIKVWMFKGEKFSSK 213
>gi|291296985|ref|YP_003508383.1| 30S ribosomal protein S3 [Meiothermus ruber DSM 1279]
gi|290471944|gb|ADD29363.1| ribosomal protein S3 [Meiothermus ruber DSM 1279]
Length = 253
Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats.
Identities = 98/213 (46%), Positives = 137/213 (64%), Gaps = 1/213 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KINP+ RLG+ + SRW+A Y L ED IR ++ L QAG+A+I IER
Sbjct: 1 MGNKINPVGLRLGITRDFESRWYAGKKAYAKTLEEDRLIRALIEKELHQAGLARIDIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRK-KLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
N ++VY+A+PG++IG+ G I+++R+ S + L+V EV P ++A L+AQ
Sbjct: 61 ADNVTVMVYAAKPGVVIGRGGETIKRLRETLQSRFPGKTVALNVQEVGNPNLSAPLVAQR 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
+A+Q+ERR RR++K+AVQ GA G K++ SGR+ GAE +R E EGRVPL TLR
Sbjct: 121 VAEQIERRFAVRRSIKQAVQRVRESGALGAKIVVSGRIGGAEQARVEWAAEGRVPLHTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
A+IDYGTA AET YGS G+K YV + + +
Sbjct: 181 ANIDYGTARAETTYGSLGVKAYVFMGEVIGGKK 213
>gi|206895537|ref|YP_002247329.1| ribosomal protein S3 [Coprothermobacter proteolyticus DSM 5265]
gi|226697689|sp|B5Y982|RS3_COPPD RecName: Full=30S ribosomal protein S3
gi|206738154|gb|ACI17232.1| ribosomal protein S3 [Coprothermobacter proteolyticus DSM 5265]
Length = 234
Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats.
Identities = 92/227 (40%), Positives = 149/227 (65%), Gaps = 2/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRLGV W SRW A +Y + +D KIR + H AG++ + IER
Sbjct: 1 MGQKIHPYGFRLGVTKNWRSRWVAPFEKYPEYIVQDEKIRTLINKHYGHAGISSVEIERL 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE--IHLSVNEVPKPEINATLIAQ 118
R+I+++ARPG+IIGK+G +IE++R+++ + ++ + +++ EV PE +A +++
Sbjct: 61 GNKMRVIIWTARPGMIIGKQGAEIERLREEIVKLLKNDYEVRIAIYEVKNPETDAQIVSD 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
SIA+Q+ERRV ++RAMK+A+ AMR GA G+K+ SGRL GAE++R E +++G++PL TL
Sbjct: 121 SIARQIERRVSYKRAMKQAISRAMRSGAQGIKIAVSGRLGGAEIARREWFVQGKLPLSTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
++ +DYG ++A T YG+ G+K ++ D + P R +
Sbjct: 181 KSDVDYGYSIAVTKYGTIGVKCWIYKGDVEDLQELLPPRGLERAERR 227
>gi|167752391|ref|ZP_02424518.1| hypothetical protein ALIPUT_00635 [Alistipes putredinis DSM 17216]
gi|167660632|gb|EDS04762.1| hypothetical protein ALIPUT_00635 [Alistipes putredinis DSM 17216]
Length = 263
Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats.
Identities = 98/212 (46%), Positives = 143/212 (67%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ W+S WF G ++ L ED KIR+YL L +A ++KI+IERT
Sbjct: 1 MGQKVNPIANRLGIIRGWDSNWF-GGKDFSEKLVEDAKIRKYLNVRLAKASISKIIIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + + +ARPG+IIGK G +++K++++L +T E+ +++ EV +PE++A ++ Q+I
Sbjct: 60 LKLVTVTIATARPGIIIGKGGQEVDKLKEELKKLTGKEVQINIFEVKRPEVDAVIVGQNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRA+K A+ S MR GA+G+KV SGR+ GAE++R+E EGR+PL T RA
Sbjct: 120 ARQLEGRVSFRRAVKTAIASTMRMGAEGIKVQVSGRVGGAEMARSETMKEGRIPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
IDY A T G G+KV++ D
Sbjct: 180 DIDYCLTEALTKVGILGVKVWICQGTVYGKRD 211
>gi|170077679|ref|YP_001734317.1| 30S ribosomal protein S3 [Synechococcus sp. PCC 7002]
gi|226697767|sp|B1XJT3|RS3_SYNP2 RecName: Full=30S ribosomal protein S3
gi|169885348|gb|ACA99061.1| ribosomal protein S3 [Synechococcus sp. PCC 7002]
Length = 240
Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats.
Identities = 101/229 (44%), Positives = 148/229 (64%), Gaps = 2/229 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P+ FRLG+ SRW+A +Y AL+ ED KIR+++ +L AG++K+LIER
Sbjct: 1 MGQKIHPVGFRLGITKEHLSRWYADPKQYPALVQEDYKIRQHIDANLNNAGISKVLIERK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN--SEIHLSVNEVPKPEINATLIAQ 118
+ +++ARPG+++G+ G+ IE +R L ++ +I ++V EV + + +A LIA+
Sbjct: 61 ADQVDLEIHTARPGVVVGRGGSGIEALRTGLQDVLGDQRQIRINVVEVNRVDADAALIAE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
I QQLERRV FRR +++AVQ A R G+K+ SGRLNGAE++RTE EGRVPL TL
Sbjct: 121 YIVQQLERRVSFRRVVRQAVQRAQRAEVQGIKIQVSGRLNGAEIARTEWVREGRVPLHTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
RA IDY A+T YG GIKV++ + + + T A + + S
Sbjct: 181 RADIDYSYKTAQTIYGILGIKVWIFKGEIIPGQEETSAANAAPLPRRKS 229
>gi|119358185|ref|YP_912829.1| 30S ribosomal protein S3 [Chlorobium phaeobacteroides DSM 266]
gi|152060855|sp|A1BJ28|RS3_CHLPD RecName: Full=30S ribosomal protein S3
gi|119355534|gb|ABL66405.1| SSU ribosomal protein S3P [Chlorobium phaeobacteroides DSM 266]
Length = 250
Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats.
Identities = 102/227 (44%), Positives = 150/227 (66%), Gaps = 2/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLK--QAGVAKILIE 58
MGQK+NP FRLG+ W SRW+ + +D IR Y+Q LK +AG+A+I+IE
Sbjct: 1 MGQKVNPNGFRLGIIRDWTSRWYDDSPVIAEKIKQDHVIRNYVQARLKREKAGIARIVIE 60
Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118
RT K+ +I +Y+ARPG ++G+KG +I + ++LS +T E+ + V EV KPE A LI +
Sbjct: 61 RTTKHIKINIYAARPGAVVGRKGEEINNLSQELSRITGKEVKIDVVEVIKPETEAQLIGE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
+IA QLE RV FRRAMK+A+Q AMR GA+G+++ +GRL GAE++R E Y EG++PL T+
Sbjct: 121 NIAYQLENRVSFRRAMKQAIQQAMRAGAEGIRIRCAGRLGGAEIARAEQYKEGKIPLHTI 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
RA++DY + A T G+ GIKV+V + + I E + + +
Sbjct: 181 RANVDYASVTAHTIAGTIGIKVWVYKGEVLVQRIDAIEEDELKRINE 227
>gi|299830605|ref|YP_003735053.1| 30S ribosomal protein S3 [Durinskia baltica]
gi|297384969|gb|ADI40268.1| 30S ribosomal protein S3 [Durinskia baltica]
Length = 214
Score = 234 bits (597), Expect = 8e-60, Method: Composition-based stats.
Identities = 84/212 (39%), Positives = 136/212 (64%), Gaps = 4/212 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +P+ FRLG+ S W+A ++Y ++L ED KIR Y+ K ++ + I R
Sbjct: 1 MGQKTHPLGFRLGITQEHKSTWYANFNQYASVLEEDDKIRTYINSIAKTNNISNLNISRN 60
Query: 61 H--KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLI 116
++ + + +PG+++G+ G+ +E + L + +N ++ + V EV K +++A L+
Sbjct: 61 GLNDQIQVTIETGKPGILVGELGSGLETVLSNLKKILPSNRQVTIKVFEVEKVDLDAKLL 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
A +A+QLE+R+ FRRA++ A+Q A + +G+K+ SGRLNGAE++R+E EGRVPLQ
Sbjct: 121 ADLVAEQLEKRIAFRRAIREALQRAQKQNVNGIKIQVSGRLNGAEIARSEWIREGRVPLQ 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208
TLRA IDY T+ A T YG GIKV++ + +
Sbjct: 181 TLRADIDYATSEANTIYGVLGIKVWLFRNEIL 212
>gi|159901432|ref|YP_001547679.1| 30S ribosomal protein S3 [Herpetosiphon aurantiacus ATCC 23779]
gi|159894471|gb|ABX07551.1| ribosomal protein S3 [Herpetosiphon aurantiacus ATCC 23779]
Length = 230
Score = 234 bits (596), Expect = 8e-60, Method: Composition-based stats.
Identities = 91/215 (42%), Positives = 141/215 (65%), Gaps = 3/215 (1%)
Query: 6 NPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQ--CHLKQAGVAKILIERTHKN 63
+P FRLG+ W S+WFA Y LH+DL +R+Y++ LK AGVA + IER+
Sbjct: 2 HPNGFRLGIIKDWKSKWFAE-RNYTEQLHQDLALRKYIEGADELKNAGVALVDIERSANR 60
Query: 64 CRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQ 123
+ +++A+PG++IGK+G +++ ++ ++ +T ++ L++ E+ +PE+NA L+A+S+A+Q
Sbjct: 61 VEVTIHTAKPGIVIGKRGANVDTLKNQIEKLTGKKVRLNIQEIHQPELNAYLVAESVAEQ 120
Query: 124 LERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHID 183
+ +RV +RAMK+A Q AMR GA G+KV SGRL GAE+SR+ EGRVPL T+RA ID
Sbjct: 121 ISKRVSHKRAMKQATQRAMRLGAQGIKVKCSGRLGGAEMSRSLWEREGRVPLHTIRADID 180
Query: 184 YGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
Y A T YG G+KV++ D + + A
Sbjct: 181 YALVHAHTTYGRIGVKVWIYKGDVLGQRERQSATA 215
>gi|326334539|ref|ZP_08200750.1| 30S ribosomal protein S3 [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325693308|gb|EGD35236.1| 30S ribosomal protein S3 [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 242
Score = 234 bits (596), Expect = 9e-60, Method: Composition-based stats.
Identities = 99/216 (45%), Positives = 147/216 (68%), Gaps = 2/216 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ W S W+ G++YG L ED KIR+Y+ L +A V++++IERT
Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDKLAEDDKIRKYVHTRLSKASVSRVIIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + + +ARPG IIGK G +++K++++L +T +I +++ E+ +PE++A L+A SI
Sbjct: 60 LKLVTVTITTARPGSIIGKGGQEVDKLKEELKKITGKDIQINIFEIKRPELDAPLVAASI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E R+ +RRA+K A+ + MR A+G+K+ SGRLNGAE++R+E Y EGR+PL T RA
Sbjct: 120 ARQIENRISYRRAIKMAIAATMRMNAEGIKIQISGRLNGAEMARSESYKEGRIPLSTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
IDY A T YG GIKV++ + EV P
Sbjct: 180 DIDYAIDEAHTTYGRMGIKVWIM-KGEVYGKRELSP 214
>gi|110639529|ref|YP_679738.1| 30S ribosomal protein S3 [Cytophaga hutchinsonii ATCC 33406]
gi|123354299|sp|Q11QB8|RS3_CYTH3 RecName: Full=30S ribosomal protein S3
gi|110282210|gb|ABG60396.1| SSU ribosomal protein S3P [Cytophaga hutchinsonii ATCC 33406]
Length = 254
Score = 234 bits (596), Expect = 9e-60, Method: Composition-based stats.
Identities = 97/212 (45%), Positives = 145/212 (68%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI FRLGV W S W+ G + L ED +IR+Y+ + + G++KI+IERT
Sbjct: 1 MGQKVNPIGFRLGVVKGWESNWY-GGKTFADKLVEDEQIRKYVLARIPKGGISKIVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + + +ARPG++IGK G +++KI+++L +T ++ +++ E+ +PE+ A L+ +SI
Sbjct: 60 IKRVTLTINTARPGVVIGKGGAEVDKIKEELKKITGKDVQINIFEIKRPEMEALLVGESI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQL+ R+ +RRAMK+A+ MR GA G+K+ SGRL GAE++RT+ Y EGR+PL TLRA
Sbjct: 120 AQQLKARISYRRAMKQAIAGTMRVGALGIKIKLSGRLGGAEMARTDQYKEGRIPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
IDY + A T YG GIKV++ + D
Sbjct: 180 DIDYAVSEALTVYGKIGIKVWIFKGEVYGKRD 211
>gi|218245134|ref|YP_002370505.1| 30S ribosomal protein S3 [Cyanothece sp. PCC 8801]
gi|257058159|ref|YP_003136047.1| 30S ribosomal protein S3 [Cyanothece sp. PCC 8802]
gi|226697695|sp|B7K329|RS3_CYAP8 RecName: Full=30S ribosomal protein S3
gi|218165612|gb|ACK64349.1| ribosomal protein S3 [Cyanothece sp. PCC 8801]
gi|256588325|gb|ACU99211.1| ribosomal protein S3 [Cyanothece sp. PCC 8802]
Length = 241
Score = 234 bits (596), Expect = 9e-60, Method: Composition-based stats.
Identities = 96/215 (44%), Positives = 137/215 (63%), Gaps = 2/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+PI FRLG+ S W+A Y L ED +IR+Y+ +L AG++ I IER
Sbjct: 1 MGQKIHPIGFRLGITADHKSCWYADSKRYPETLQEDRQIRQYITKNLSNAGISDIRIERK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLIAQ 118
+ +++ARPG+++G+ G+ IE++R L N +I ++V EV + + +A LIA+
Sbjct: 61 ADQVDLAIHTARPGVVVGRGGSGIEQLRLGLQQDLGGNRQIRINVIEVQRVDADAMLIAE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
I QQLERRV FRR +++A+Q A R G+K+ SGRLNGAE++RTE EGRVPL TL
Sbjct: 121 YITQQLERRVSFRRVVRQAIQRAQRAEVKGIKIQVSGRLNGAEIARTEWVREGRVPLHTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
RA IDY A+T YG G+KV+V + + +
Sbjct: 181 RADIDYAYRTAQTIYGILGVKVWVFKGEIIPGQEE 215
>gi|325269529|ref|ZP_08136145.1| 30S ribosomal protein S3 [Prevotella multiformis DSM 16608]
gi|324988148|gb|EGC20115.1| 30S ribosomal protein S3 [Prevotella multiformis DSM 16608]
Length = 242
Score = 234 bits (596), Expect = 9e-60, Method: Composition-based stats.
Identities = 101/221 (45%), Positives = 147/221 (66%), Gaps = 1/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ W S WF G +G L ED KIR YL L++A V++I+IERT
Sbjct: 1 MGQKVNPISNRLGIIRGWESNWF-GGKNFGDNLVEDRKIRTYLNKRLEKASVSRIVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I + +ARPG++IGK G D++K++++L N+ EI +++ EV KPE++A ++ +I
Sbjct: 60 LKLVTITICTARPGIVIGKGGQDVDKLKEELKNLFKKEIQINIFEVKKPELDANIVGNNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E ++ +RRA+K AV + MR GA+GVK+ +GRLNGAE++R E + EGR PL T RA
Sbjct: 120 ARQVEGKIAYRRAIKMAVANTMRAGAEGVKIQITGRLNGAEMARKEMFKEGRTPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
IDY A T G GIKV++ + + D T A+ +
Sbjct: 180 DIDYCQTEALTKVGLLGIKVWICRGEVYNKVDLTPNFAQEK 220
>gi|172038933|ref|YP_001805434.1| 30S ribosomal protein S3 [Cyanothece sp. ATCC 51142]
gi|254764526|sp|B1WQR6|RS3_CYAA5 RecName: Full=30S ribosomal protein S3
gi|171700387|gb|ACB53368.1| 30S ribosomal protein S3 [Cyanothece sp. ATCC 51142]
Length = 241
Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 102/230 (44%), Positives = 142/230 (61%), Gaps = 5/230 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+PI FRLGV S W+A Y LL EDL IR++++ +L AG+A I IER
Sbjct: 1 MGQKIHPIGFRLGVTKEHKSCWYADKRRYPELLQEDLAIRQHVEKNLSNAGIADIRIERK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLIAQ 118
+ +++ARPG+++G+ G+ IE++R L N +I ++V EV + + +A LIA+
Sbjct: 61 ADQIDLAIHTARPGVVVGRGGSGIEQLRTGLQQTLGENRQIRINVIEVSRVDADAALIAE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
I QQLERRV FRR +++A+Q A R G+K+ GRLNGAE++RTE EGRVPL TL
Sbjct: 121 YITQQLERRVSFRRVVRQAIQRAQRAEVKGIKIQVGGRLNGAEIARTEWVREGRVPLHTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST---IPAAEHRVVEK 225
RA IDY A+T YG G+KV+V + + D PA R +
Sbjct: 181 RADIDYAYRTAQTIYGILGVKVWVFKGEIIPGQDEQAMAAPAPTPRKKRR 230
>gi|47093991|ref|ZP_00231725.1| ribosomal protein S3 [Listeria monocytogenes str. 4b H7858]
gi|47017652|gb|EAL08451.1| ribosomal protein S3 [Listeria monocytogenes str. 4b H7858]
Length = 209
Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 88/210 (41%), Positives = 139/210 (66%), Gaps = 1/210 (0%)
Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVY 69
R+GV W+S+W+A +Y LHEDL+IR+Y+ L A V+++ IER I ++
Sbjct: 1 MRIGVIRDWDSKWYAE-KDYADFLHEDLRIRDYVAKRLSDASVSRVEIERAANRVNITIH 59
Query: 70 SARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV 129
+A+PG++IGK G+++E +RK L+ +T +H+++ E+ + +++A L+A++IA+QLE RV
Sbjct: 60 TAKPGMVIGKGGSEVEALRKNLNELTQKRVHINIVEIKRADLDAKLVAENIARQLEGRVS 119
Query: 130 FRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189
FRRA K+A+Q MR GA G+K SGRL GA+++R E Y EG VPL TLRA IDY A
Sbjct: 120 FRRAQKQAIQRTMRAGAKGIKTQVSGRLGGADIARAEHYSEGTVPLHTLRADIDYAWEEA 179
Query: 190 ETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
+T YG G+KV++ + + + + +
Sbjct: 180 DTTYGKLGVKVWIYRGEVLPTKKNNVEGGK 209
>gi|262066298|ref|ZP_06025910.1| ribosomal protein S3 [Fusobacterium periodonticum ATCC 33693]
gi|294783636|ref|ZP_06748960.1| ribosomal protein S3 [Fusobacterium sp. 1_1_41FAA]
gi|291379993|gb|EFE87511.1| ribosomal protein S3 [Fusobacterium periodonticum ATCC 33693]
gi|294480514|gb|EFG28291.1| ribosomal protein S3 [Fusobacterium sp. 1_1_41FAA]
Length = 219
Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 87/219 (39%), Positives = 141/219 (64%), Gaps = 2/219 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ W+S W+A EY HED++I+E+++ + G++K+ IERT
Sbjct: 1 MGQKVDPRGLRLGITRAWDSNWYADKKEYVKYFHEDVQIKEFIKKNYFHTGISKVRIERT 60
Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
+ +++ + GLIIG+KG +I+ +R KL +T ++ + V E+ +A L+A+S
Sbjct: 61 SPSQVVVHIHTGKAGLIIGRKGAEIDALRAKLEKLTAKKVTVKVQEIKDLNGDAVLVAES 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMR-FGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
IA Q+E+R+ +++AM +A+ +M+ G+KV+ SGRLNGAE++R+E +EG+VPL TL
Sbjct: 121 IAAQIEKRIAYKKAMTQAISRSMKSPEVKGIKVMISGRLNGAEIARSEWAVEGKVPLHTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
RA IDY A A T YG+ GIKV++ + + A
Sbjct: 181 RADIDYAVATAHTTYGALGIKVWIFHGEVLPSKKEGGEA 219
>gi|237725879|ref|ZP_04556360.1| 30S ribosomal protein S3 [Bacteroides sp. D4]
gi|229435687|gb|EEO45764.1| 30S ribosomal protein S3 [Bacteroides dorei 5_1_36/D4]
Length = 242
Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 100/221 (45%), Positives = 152/221 (68%), Gaps = 1/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ W+S W+ G++YG L ED KIR+YL L +A V++I+IERT
Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWY-GGNDYGDALLEDSKIRKYLNARLAKASVSRIVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I V +ARPG+IIGK G +++K++++L +T+ +I +++ EV +PE++A ++A +I
Sbjct: 60 LKLVTITVCTARPGIIIGKGGQEVDKLKEELKKITDKDIQINIFEVKRPELDAVIVANNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E ++ +RRA+K A+ + MR GA+G+KV+ SGRLNGAE++R+E Y EGR PL T RA
Sbjct: 120 ARQVEGKIAYRRAIKMAIANTMRMGAEGIKVLISGRLNGAEMARSEMYKEGRTPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
IDY A A T G GIKV++ + + + +
Sbjct: 180 DIDYCHAEALTKVGLLGIKVWICRGEVYGKRELAPNFTQTK 220
>gi|325954998|ref|YP_004238658.1| ribosomal protein S3 [Weeksella virosa DSM 16922]
gi|323437616|gb|ADX68080.1| ribosomal protein S3 [Weeksella virosa DSM 16922]
Length = 240
Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 100/227 (44%), Positives = 153/227 (67%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ W+S W+ G++YG + ED K+R+YL+ L +AGV++I I+RT
Sbjct: 1 MGQKTNPIGNRLGIIRGWDSNWY-GGNDYGDRIAEDAKVRKYLRARLSKAGVSRIYIDRT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + V +ARPG+IIGK G +++K++++L +T E+ +++ E+ +PE++A L+ SI
Sbjct: 60 FKLVTVTVTTARPGIIIGKGGQEVDKLKEELKKITGKEVQINIFEIKRPELDAILVGDSI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E R+ +RRA+K A+ SAMR A+G+K+ SGRLNGAE++R+E Y EGR+PL T RA
Sbjct: 120 ARQIENRISYRRAIKMAMTSAMRMNAEGIKIQISGRLNGAEMARSETYKEGRIPLSTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDY + A T YG GIKV++ + + + + K S
Sbjct: 180 DIDYHISEAHTTYGRLGIKVWIMKGEVYGKRELSPLVGLQKKQNKRS 226
>gi|150003381|ref|YP_001298125.1| 30S ribosomal protein S3 [Bacteroides vulgatus ATCC 8482]
gi|212695299|ref|ZP_03303427.1| hypothetical protein BACDOR_04839 [Bacteroides dorei DSM 17855]
gi|237711679|ref|ZP_04542160.1| 30S ribosomal protein S3 [Bacteroides sp. 9_1_42FAA]
gi|254881328|ref|ZP_05254038.1| 30S ribosomal protein S3 [Bacteroides sp. 4_3_47FAA]
gi|265753099|ref|ZP_06088668.1| 30S ribosomal protein S3 [Bacteroides sp. 3_1_33FAA]
gi|294777827|ref|ZP_06743271.1| ribosomal protein S3 [Bacteroides vulgatus PC510]
gi|319640330|ref|ZP_07995055.1| 30S ribosomal protein S3 [Bacteroides sp. 3_1_40A]
gi|189044951|sp|A6KYI9|RS3_BACV8 RecName: Full=30S ribosomal protein S3
gi|149931805|gb|ABR38503.1| 30S ribosomal protein S3 [Bacteroides vulgatus ATCC 8482]
gi|212662209|gb|EEB22783.1| hypothetical protein BACDOR_04839 [Bacteroides dorei DSM 17855]
gi|229454374|gb|EEO60095.1| 30S ribosomal protein S3 [Bacteroides sp. 9_1_42FAA]
gi|254834121|gb|EET14430.1| 30S ribosomal protein S3 [Bacteroides sp. 4_3_47FAA]
gi|263236285|gb|EEZ21780.1| 30S ribosomal protein S3 [Bacteroides sp. 3_1_33FAA]
gi|294448281|gb|EFG16837.1| ribosomal protein S3 [Bacteroides vulgatus PC510]
gi|317388105|gb|EFV68959.1| 30S ribosomal protein S3 [Bacteroides sp. 3_1_40A]
Length = 243
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 100/221 (45%), Positives = 152/221 (68%), Gaps = 1/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ W+S W+ G++YG L ED KIR+YL L +A V++I+IERT
Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWY-GGNDYGDALLEDSKIRKYLNARLAKASVSRIVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I V +ARPG+IIGK G +++K++++L +T+ +I +++ EV +PE++A ++A +I
Sbjct: 60 LKLVTITVCTARPGIIIGKGGQEVDKLKEELKKITDKDIQINIFEVKRPELDAVIVANNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E ++ +RRA+K A+ + MR GA+G+KV+ SGRLNGAE++R+E Y EGR PL T RA
Sbjct: 120 ARQVEGKIAYRRAIKMAIANTMRMGAEGIKVLISGRLNGAEMARSEMYKEGRTPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
IDY A A T G GIKV++ + + + +
Sbjct: 180 DIDYCHAEALTKVGLLGIKVWICRGEVYGKRELAPNFTQTK 220
>gi|198273997|ref|ZP_03206529.1| hypothetical protein BACPLE_00133 [Bacteroides plebeius DSM 17135]
gi|198273075|gb|EDY97344.1| hypothetical protein BACPLE_00133 [Bacteroides plebeius DSM 17135]
Length = 243
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 100/221 (45%), Positives = 150/221 (67%), Gaps = 1/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ W+S W+ G YG L ED KIR+YL L +A V++I+IERT
Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWY-GGKNYGDALLEDSKIRKYLNARLAKASVSRIVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I V +ARPG+IIGK G +++K++++L +T+ +I +++ EV +PE++A ++A +I
Sbjct: 60 LKLVTITVCTARPGIIIGKGGQEVDKLKEELKKITDKDIQINIFEVKRPELDAVIVANNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E ++ +RRA+K A+ + MR GA+G+KV+ SGRLNGAE++R+E Y EGR PL T RA
Sbjct: 120 ARQVEGKIAYRRAIKMAIANTMRMGAEGIKVLISGRLNGAEMARSEMYKEGRTPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
IDY A A T G GIKV++ + + + +
Sbjct: 180 DIDYCHAEALTKVGLLGIKVWICRGEVYGKRELAPNFTQSK 220
>gi|189460690|ref|ZP_03009475.1| hypothetical protein BACCOP_01337 [Bacteroides coprocola DSM 17136]
gi|189432649|gb|EDV01634.1| hypothetical protein BACCOP_01337 [Bacteroides coprocola DSM 17136]
Length = 243
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 101/221 (45%), Positives = 150/221 (67%), Gaps = 1/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ W+S W+ G YG L ED KIR+YL L +A V++I+IERT
Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWY-GGKNYGDALLEDSKIRKYLNARLAKASVSRIVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I V +ARPG+IIGK G +++K++++L +T+ +I +++ EV KPE++A ++A +I
Sbjct: 60 LKLVTITVCTARPGIIIGKGGQEVDKLKEELKKITDKDIQINIFEVKKPELDAVIVANNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E ++ +RRA+K A+ + MR GA+G+KV+ SGRLNGAE++R+E Y EGR PL T RA
Sbjct: 120 ARQVEGKIAYRRAIKMAIANTMRMGAEGIKVLISGRLNGAEMARSEMYKEGRTPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
IDY A A T G GIKV++ + + + +
Sbjct: 180 DIDYCHAEALTKVGLLGIKVWICRGEVYGKRELAPNFTQSK 220
>gi|11467774|ref|NP_050825.1| ribosomal protein S3 [Nephroselmis olivacea]
gi|27734487|sp|Q9TL20|RR3_NEPOL RecName: Full=30S ribosomal protein S3, chloroplastic
gi|5880703|gb|AAD54796.1|AF137379_19 ribosomal protein S3 [Nephroselmis olivacea]
Length = 221
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 90/219 (41%), Positives = 132/219 (60%), Gaps = 3/219 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P+ FRLG+ S WFA Y + +HE+ ++R+YL+ L AGVA + + R
Sbjct: 1 MGQKIHPLGFRLGITQQHRSTWFAPRKLYVSWIHEERQLRDYLKTRLADAGVANVQLTRQ 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATLIAQ 118
+ +++A PG I+G+ G +E +R+ + + + V E+ P+ A LI
Sbjct: 61 SDRIEVEIHTACPGAIVGRTGQGLEILREDIQKRLPKVRRVIVHVVEIANPDAQAVLIGG 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMR-FGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
IA+QLE R+ FRRA+++AVQ AMR G +G+K+ SGRLNGAE++R+E EGRVPL T
Sbjct: 121 IIAKQLEERIPFRRAVRQAVQRAMRAPGVEGIKIEVSGRLNGAEIARSEWVREGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
LRA +DY A+T YG GIKV++ + P
Sbjct: 181 LRADVDYCDCTAQTIYGVLGIKVWIFRGEIRPVRQVLAP 219
>gi|226968672|ref|YP_002808632.1| small subunit ribosomal protein S3 [Micromonas sp. RCC299]
gi|226431150|gb|ACO55556.1| small subunit ribosomal protein S3 [Micromonas sp. RCC299]
Length = 211
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 92/208 (44%), Positives = 136/208 (65%), Gaps = 2/208 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FR+GV T S+WFA+ +Y L+ EDL IR+Y+ +L A ++++ I R
Sbjct: 1 MGQKVHPLGFRIGVTQTHRSQWFAKPKDYANLVKEDLIIRDYVAKNLTDASISRVNISRQ 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRK--KLSNMTNSEIHLSVNEVPKPEINATLIAQ 118
I ++ARP ++G KG + K+R+ K + + L V + +PE++A IA+
Sbjct: 61 VDRIEIEFFTARPRALVGAKGEALVKVREALKAKLPAHRSVALYVTKTVQPEVDAVCIAE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
+IA QLE+R FRR +++A++SA + GA G+KV +GRLNGAE++R+E EGRVPL T+
Sbjct: 121 NIAMQLEKRAPFRRTIRQALRSAQKAGAVGIKVQIAGRLNGAEIARSEWAREGRVPLHTI 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRD 206
A IDY TA A T YG GIKV+V D
Sbjct: 181 SADIDYATARALTVYGILGIKVWVCKGD 208
>gi|284929567|ref|YP_003422089.1| 30S ribosomal protein S3P [cyanobacterium UCYN-A]
gi|284810011|gb|ADB95708.1| SSU ribosomal protein S3P [cyanobacterium UCYN-A]
Length = 240
Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 99/232 (42%), Positives = 143/232 (61%), Gaps = 6/232 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+PI FRLG+ SRW+A Y LL EDL +R++++ +L AG+A I IER
Sbjct: 1 MGQKIHPIGFRLGITKEHKSRWYADKRRYPELLQEDLAVRKHIEKNLSNAGIADIRIERK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLIAQ 118
+ +++ARPG+++G+ G+ IE++R L N +I ++V EV + + +A LIA+
Sbjct: 61 ADQIDLAIHTARPGVVVGRGGSGIEQLRTALQKNLGENRQIRINVIEVSRVDADAALIAE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
I QQLERRV FRR +++A+Q A R G+K+ GRLNGAE++R+E EGRVPL TL
Sbjct: 121 YITQQLERRVSFRRVVRQAIQRAQRAEVKGIKIQVGGRLNGAEIARSEWVREGRVPLHTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS----TIPAAEHRVVEKD 226
RA IDY A+T YG G+KV+V + + + + P R K
Sbjct: 181 RADIDYSYRTAQTTYGILGVKVWVFKGEIIPGQEEQTTTSAPPTPKRNRRKQ 232
>gi|281423833|ref|ZP_06254746.1| ribosomal protein S3 [Prevotella oris F0302]
gi|281402060|gb|EFB32891.1| ribosomal protein S3 [Prevotella oris F0302]
Length = 252
Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 99/222 (44%), Positives = 147/222 (66%), Gaps = 1/222 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ W+S WF G +G L ED KIR+YL L +A V++I+IERT
Sbjct: 12 MGQKVNPISNRLGIIRGWDSNWF-GGKNFGDNLVEDCKIRKYLNERLAKASVSRIVIERT 70
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I + +ARPG++IGK G D++K++++L + +I +++ EV KPE++A ++A +I
Sbjct: 71 LKLVTITICTARPGIVIGKGGQDVDKLKEELKKLYKKDIQINIFEVKKPELDANIVANNI 130
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E ++ +RRA+K AVQ+ MR GA+G+KV +GRLNGAE++R E + EGR PL T RA
Sbjct: 131 ARQVEGKISYRRAIKMAVQNTMRAGAEGIKVQITGRLNGAEMARKEMFKEGRTPLHTFRA 190
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
IDY A T G GIKV++ + + T + +
Sbjct: 191 DIDYCATEALTKVGLLGIKVWICRGEVYGKRELTPNFTQEKQ 232
>gi|307154836|ref|YP_003890220.1| 30S ribosomal protein S3 [Cyanothece sp. PCC 7822]
gi|306985064|gb|ADN16945.1| ribosomal protein S3 [Cyanothece sp. PCC 7822]
Length = 241
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 98/216 (45%), Positives = 141/216 (65%), Gaps = 2/216 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P+ FRLG+ SRW+A Y LL ED KIR Y+ +L AG++ + IER
Sbjct: 1 MGQKIHPVGFRLGITKEHKSRWYADKHNYPELLQEDRKIRSYIDANLSNAGISDVRIERK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIE--KIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118
I +++ARPG+++G+ G+ IE ++ + + + +I ++V EV + + +ATLIA+
Sbjct: 61 ADQVDIEIHTARPGVVVGRGGSGIESLRLGLQTALGGHRQIRINVIEVSRVDADATLIAE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
IAQQLERRV FRR +++A+Q A R G+KV SGRLNGAE++RTE EGRVPL TL
Sbjct: 121 YIAQQLERRVSFRRVVRQAIQRAQRAEVKGIKVQVSGRLNGAEIARTEWIREGRVPLHTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
RA ID+ A+T YG G+KV+V + + + T
Sbjct: 181 RADIDFSYRTAKTIYGILGVKVWVFKGEIIPGQEET 216
>gi|307565122|ref|ZP_07627630.1| 30S ribosomal protein S3 [Prevotella amnii CRIS 21A-A]
gi|307346153|gb|EFN91482.1| 30S ribosomal protein S3 [Prevotella amnii CRIS 21A-A]
Length = 245
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 98/227 (43%), Positives = 148/227 (65%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ W S WF G +G L ED KIR YL L++A +++I IERT
Sbjct: 1 MGQKVNPISNRLGIIRGWESNWF-GGKNFGESLVEDRKIRAYLNKRLEKASISRIAIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I + +ARPG++IGK G D++K++++L N+ EI +++ EV KP+++A ++ +I
Sbjct: 60 LKLVTITICTARPGIVIGKGGQDVDKLKEELKNLFKKEIQINIFEVKKPDLDANIVGNNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E ++ +RRA+K A+ + MR GA+GVKV +GRLNGAE++R E + EGR PL TLRA
Sbjct: 120 ARQVEGKIAYRRAIKMAIANVMRAGAEGVKVQIAGRLNGAEMARKEMFKEGRTPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDY A T G GIKV++ + + + T + + + +
Sbjct: 180 DIDYCATEALTKVGLLGIKVWICRGEVYNKVELTPNFTQDKTSARSN 226
>gi|38426844|gb|AAR20467.1| ribosomal protein S3 [Candidatus Phytoplasma australiense]
gi|38426860|gb|AAR20475.1| ribosomal protein S3 [Candidatus Phytoplasma australiense]
Length = 216
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 135/215 (62%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW+S+W E AL+ ED IR+ + K+ +++I I+R
Sbjct: 1 MGQKTNPNGLRLGIIRTWDSQWCVNDKEIPALIKEDFLIRQLINNFSKRNSISQIEIQRL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
T I +++A+PG+IIGK G KI+ +L +T +I+L++ EV P+ A L+
Sbjct: 61 KEKTKNRITITIHTAKPGIIIGKDGETRNKIQAQLKKLTQKDINLNILEVKNPDKTAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A + GA G+KV+ SGRLNG E++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMKFRRVQKMAIQKAFKAGAKGIKVLISGRLNGDEIARSERHDEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAALEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|260592759|ref|ZP_05858217.1| ribosomal protein S3 [Prevotella veroralis F0319]
gi|288803939|ref|ZP_06409362.1| ribosomal protein S3 [Prevotella melaninogenica D18]
gi|302345080|ref|YP_003813433.1| ribosomal protein S3 [Prevotella melaninogenica ATCC 25845]
gi|325856065|ref|ZP_08171954.1| ribosomal protein S3 [Prevotella denticola CRIS 18C-A]
gi|327313196|ref|YP_004328633.1| 30S ribosomal protein S3 [Prevotella denticola F0289]
gi|260535290|gb|EEX17907.1| ribosomal protein S3 [Prevotella veroralis F0319]
gi|288333572|gb|EFC72024.1| ribosomal protein S3 [Prevotella melaninogenica D18]
gi|302150155|gb|ADK96417.1| ribosomal protein S3 [Prevotella melaninogenica ATCC 25845]
gi|325483737|gb|EGC86701.1| ribosomal protein S3 [Prevotella denticola CRIS 18C-A]
gi|326945970|gb|AEA21855.1| ribosomal protein S3 [Prevotella denticola F0289]
Length = 242
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 100/221 (45%), Positives = 146/221 (66%), Gaps = 1/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ W S WF G +G L ED KIR YL L++A V++I+IERT
Sbjct: 1 MGQKVNPISNRLGIIRGWESNWF-GGKNFGDNLVEDRKIRTYLNKRLEKASVSRIVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I + +ARPG++IGK G D++K++++L N+ EI +++ EV KPE++A ++ +I
Sbjct: 60 LKLVTITICTARPGIVIGKGGQDVDKLKEELKNLFKKEIQINIFEVKKPELDANIVGNNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E ++ +RRA+K AV + MR GA+G+KV +GRLNGAE++R E + EGR PL T RA
Sbjct: 120 ARQVEGKIAYRRAIKMAVANTMRAGAEGIKVQITGRLNGAEMARKEMFKEGRTPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
IDY A T G GIKV++ + + D T + +
Sbjct: 180 DIDYCQTEALTKVGLLGIKVWICRGEVYNKVDLTPNFTQEK 220
>gi|15639188|ref|NP_218634.1| 30S ribosomal protein S3 [Treponema pallidum subsp. pallidum str.
Nichols]
gi|189025428|ref|YP_001933200.1| 30S ribosomal protein S3 [Treponema pallidum subsp. pallidum SS14]
gi|6094180|sp|O83225|RS3_TREPA RecName: Full=30S ribosomal protein S3
gi|226697771|sp|B2S2E2|RS3_TREPS RecName: Full=30S ribosomal protein S3
gi|3322459|gb|AAC65180.1| ribosomal protein S3 (rpsC) [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189018003|gb|ACD70621.1| ribosomal protein S3 [Treponema pallidum subsp. pallidum SS14]
gi|291059602|gb|ADD72337.1| ribosomal protein S3 [Treponema pallidum subsp. pallidum str.
Chicago]
Length = 247
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 99/207 (47%), Positives = 141/207 (68%), Gaps = 2/207 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCH--LKQAGVAKILIE 58
MGQK++PI RLG+N W+SRW+A EY ALLHEDL+IR ++ K A +A++ I
Sbjct: 1 MGQKVSPIGLRLGINKVWSSRWYAGPREYAALLHEDLRIRSMIRSFPECKNADIAEVEIV 60
Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118
R + +++++ARPG++IG KG +IEKI ++ N ++ + V E+ + E+NA L+AQ
Sbjct: 61 RHPQRVTVVMHTARPGVVIGAKGVNIEKIGAEVQKRLNKKVQIKVKEIKRMELNAYLVAQ 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
++A+QL RV FR+ +++A M+ GA GVK+ SGRL GAE+SRTE EGR PL TL
Sbjct: 121 NVARQLTARVSFRKCLRQACAGTMKSGAQGVKIRVSGRLGGAEMSRTEEIKEGRTPLHTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLR 205
RA IDYG A A T YGS G+KV++
Sbjct: 181 RADIDYGFAEAHTTYGSIGVKVWLYSG 207
>gi|255994813|ref|ZP_05427948.1| ribosomal protein S3 [Eubacterium saphenum ATCC 49989]
gi|255993526|gb|EEU03615.1| ribosomal protein S3 [Eubacterium saphenum ATCC 49989]
Length = 300
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 95/226 (42%), Positives = 144/226 (63%), Gaps = 1/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+G+N W S+W+A + L ED IRE+++ L AGV+KILIER
Sbjct: 1 MGQKVSPHGLRVGINKEWGSKWYADKKSFADFLAEDKAIREHVKTKLYGAGVSKILIERP 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
++I+ R G++IGK G E I+K L+ +T E+ + + +V + E++A L A+
Sbjct: 61 AEDKVKVIIAVGRSGMVIGKGGDGHEAIKKSLAKLTGKEVAVDIRQVGRTELDAQLTAER 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA+ LE+RV +RRAMK+A+ AM+ GA G+K++ SGRL GAE++R E Y EG VPL TLR
Sbjct: 121 IAEDLEKRVSYRRAMKQAMGRAMKAGAKGIKLLVSGRLGGAEIARDEKYSEGNVPLHTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
+ IDYG A A+T YG G+K++++ + + + E + K
Sbjct: 181 SDIDYGFAEADTTYGKLGVKIWINHGEILDKGLQDLIREEKKDGRK 226
>gi|193214806|ref|YP_001996005.1| 30S ribosomal protein S3 [Chloroherpeton thalassium ATCC 35110]
gi|193088283|gb|ACF13558.1| ribosomal protein S3 [Chloroherpeton thalassium ATCC 35110]
Length = 266
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 96/227 (42%), Positives = 151/227 (66%), Gaps = 2/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL--KQAGVAKILIE 58
MGQK+NP+ FRLGV W+SRW+ + + ED IR Y+ L ++AGVAK++IE
Sbjct: 1 MGQKVNPVGFRLGVIKDWDSRWYDNTDKIAGKIKEDQVIRNYVITRLKRQKAGVAKVVIE 60
Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118
RT KN R+ +Y+ARPG ++G+ G +I + ++L +T+ +I + V E+ +PE++A L+A
Sbjct: 61 RTSKNVRLYIYAARPGAVVGRSGEEINTLAQELGKITSKDIKIDVIEIKRPELDAQLVAD 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
+IA QLE R+ FRRAMK+A+Q A R GA+G+++ +GRL GAE++R E Y EG++PL T+
Sbjct: 121 NIASQLEGRISFRRAMKQAIQQARRAGAEGIRIRCAGRLGGAEIARAEQYKEGKIPLHTI 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
RA+IDY + T G+ GIKV++ + + + E + ++
Sbjct: 181 RANIDYAASTGFTITGTIGIKVWIYKGEILGQRIDMLEEEERQKAKE 227
>gi|189501648|ref|YP_001957365.1| 30S ribosomal protein S3 [Candidatus Amoebophilus asiaticus 5a2]
gi|189497089|gb|ACE05636.1| ribosomal protein S3 [Candidatus Amoebophilus asiaticus 5a2]
Length = 240
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 95/224 (42%), Positives = 148/224 (66%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP R+G W S WF+ Y L ED KIR+YL + +A ++KI+IERT
Sbjct: 1 MGQKVNPNSLRIGYIKGWESNWFSSKKGYADKLIEDHKIRKYLGARMAKANLSKIVIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I V+S++PG+IIGK G ++E+I+++L +T E+H+++ E+ +PE++A L+ S+
Sbjct: 61 LKRITITVHSSKPGIIIGKGGAEVERIKEELRKLTEKEVHVNILEIKRPELDAKLVGSSM 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQ++ R+ ++R +K+A+ + MR GA G+K+ SGRL GAE++R+E + EGR+PL TLRA
Sbjct: 121 AQQIQARISYKRVVKQALSATMRVGAQGIKIQVSGRLAGAEIARSEQFKEGRIPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
ID+ + A+T YG GIKV++ + D + A E
Sbjct: 181 DIDFAISEAQTVYGKIGIKVWIFKGEVYQRPDLSSNATTATSSE 224
>gi|254495347|ref|ZP_05108271.1| 30S ribosomal protein S3 [Polaribacter sp. MED152]
gi|85819701|gb|EAQ40858.1| 30S ribosomal protein S3 [Polaribacter sp. MED152]
Length = 238
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 94/216 (43%), Positives = 148/216 (68%), Gaps = 2/216 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ W S W+ G++YG + ED KIR+Y+ L +A V++++IERT
Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDKIAEDDKIRKYIHARLSKASVSRVIIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + + +ARPG+IIGK G +++K++++L +T E+ +++ E+ +PE++A L+A S+
Sbjct: 60 LKLVTVTITTARPGIIIGKGGQEVDKLKEELKKITGKEVQINIFEIKRPELDARLVATSV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E R+ ++RA+K A+ + MR A+G+K+ SGRLNGAE++R+E + EGR+PL T RA
Sbjct: 120 ARQIENRISYKRAIKMAIAATMRMNAEGIKIQISGRLNGAEMARSEHFKEGRIPLSTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
IDY A T YG G+KV++ + EV P
Sbjct: 180 DIDYALVEAHTTYGRLGVKVWIM-KGEVYGKRELSP 214
>gi|116490664|ref|YP_810208.1| SSU ribosomal protein S3P [Oenococcus oeni PSU-1]
gi|290890080|ref|ZP_06553163.1| hypothetical protein AWRIB429_0553 [Oenococcus oeni AWRIB429]
gi|122277152|sp|Q04G79|RS3_OENOB RecName: Full=30S ribosomal protein S3
gi|116091389|gb|ABJ56543.1| SSU ribosomal protein S3P [Oenococcus oeni PSU-1]
gi|290480271|gb|EFD88912.1| hypothetical protein AWRIB429_0553 [Oenococcus oeni AWRIB429]
Length = 267
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 101/213 (47%), Positives = 145/213 (68%), Gaps = 7/213 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI FR+GV W+++W+A EY L EDL+IR+YL+ +LK A V +I IERT
Sbjct: 1 MGQKINPIGFRVGVIRDWDAKWYADKKEYVPALQEDLRIRKYLETNLKDAAVDRITIERT 60
Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM------TNSEIHLSVNEVPKPEINA 113
+ +++A+PG++IG+ G D+E++R +LS + + +++++ E+ KP++NA
Sbjct: 61 EPTRINLTIHTAKPGIVIGRGGADVERLRSELSKIVDTYKGQHKRVNINIVEIRKPDLNA 120
Query: 114 TLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV 173
L+ Q IA LERRV FRRAM+ A+Q R GA GV+ + SGRLNGA+++R E Y EG V
Sbjct: 121 HLVGQQIAADLERRVAFRRAMRGAIQRVQRAGAKGVRTMVSGRLNGADIARKEQYTEGTV 180
Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
PL TLRA IDY A T+YG+ GIK ++ D
Sbjct: 181 PLHTLRADIDYSWDEAMTSYGNLGIKTWIYRGD 213
>gi|114107171|ref|YP_740156.1| ribosomal protein S3 [Daucus carota]
gi|122239957|sp|Q0G9S3|RR3_DAUCA RecName: Full=30S ribosomal protein S3, chloroplastic
gi|113200946|gb|ABI32462.1| ribosomal protein S3 [Daucus carota]
Length = 218
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 81/218 (37%), Positives = 132/218 (60%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + +S WF + Y L ED KIR++++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFTQPKNYSEGLQEDQKIRDFIKNYVQKNLKISSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I + ++I+Y P L+I + IEK++ +K N N ++++++ + KP
Sbjct: 61 ARIEIHKRIDLIQVIIYMGFPKLLIENRPGGIEKLQMNLQKEFNCVNRKLNITITRIAKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ ++A+ IA QL+ RV FR+AMK+A++ + G++V SGR++G E++R E
Sbjct: 121 YGSPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQISGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY + T YG GIK+++ L E
Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFLDGE 218
>gi|320526875|ref|ZP_08028065.1| ribosomal protein S3 [Solobacterium moorei F0204]
gi|320132843|gb|EFW25383.1| ribosomal protein S3 [Solobacterium moorei F0204]
Length = 269
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 99/227 (43%), Positives = 143/227 (62%), Gaps = 4/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+GV W+SRW+A +++G LL+ED+K+R +L+ LK A ++++ IERT
Sbjct: 1 MGQKVSPIGMRVGVIRDWDSRWYANKADFGDLLNEDVKVRNFLEKELKDAYISRVEIERT 60
Query: 61 HKNC-RIIVYSARPGLIIGKKGTD--IEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLI 116
K ++IV ARPG ++GK G +E ++KKLS +T I + V V P+++A L+
Sbjct: 61 SKKDVKVIVRCARPGAMLGKDGDKDKMEVLKKKLSKLTGGKNIKVDVIAVANPDLDARLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
A+ I +QLE R FR A K+A+Q MR GA G+K +A GRL GAE++R E Y G VPL
Sbjct: 121 ARRICEQLEARQSFRIAQKKAIQQTMRSGAKGIKTLAKGRLGGAEIARQEGYARGVVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223
TLR+ IDY A T YG G+KV++ + + P A R
Sbjct: 181 TLRSDIDYAAEEATTTYGKLGVKVWICRGEVLPGQMVKEPEAPSRPA 227
>gi|32965350|gb|AAP91833.1| ribosomal protein S3 [Paulownia witches'-broom phytoplasma]
gi|145982746|gb|ABQ01156.1| ribosomal protein S3 [Paulownia witches'-broom phytoplasma]
Length = 244
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 95/215 (44%), Positives = 132/215 (61%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++A+PG+IIGK G K+ KL +T +++L+V EV + NA LI
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKNALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|194335451|ref|YP_002017245.1| ribosomal protein S3 [Pelodictyon phaeoclathratiforme BU-1]
gi|226697741|sp|B4SBV3|RS3_PELPB RecName: Full=30S ribosomal protein S3
gi|194307928|gb|ACF42628.1| ribosomal protein S3 [Pelodictyon phaeoclathratiforme BU-1]
Length = 249
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 103/227 (45%), Positives = 150/227 (66%), Gaps = 2/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ--AGVAKILIE 58
MGQK+NP FRLG+ W SRW+ + +D IR Y+ LK+ AG+A+I+IE
Sbjct: 1 MGQKVNPTGFRLGIIRDWASRWYDDSPVISEKIKQDHVIRTYVLARLKKERAGIARIIIE 60
Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118
RT K+ +I +Y+ARPG ++G+KG +I + ++LS +T E+ + V EV KPEI A LI
Sbjct: 61 RTTKHVKINIYAARPGAVVGRKGEEINNLSQELSRITGKEVKIDVVEVVKPEIEAQLIGD 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
+IA QLE RV FRRAMK+A+Q AMR GA+GV++ GRL GAE++R+E Y EG++PL T+
Sbjct: 121 NIAYQLENRVSFRRAMKQAIQQAMRSGAEGVRIRCGGRLGGAEIARSEQYKEGKIPLHTI 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
RA++DY + A T G+ GIKV+V + + I E + +++
Sbjct: 181 RANVDYASVTAHTIAGTIGIKVWVYKGEVLVQRIDAIEEDELKRIKE 227
>gi|282858368|ref|ZP_06267548.1| ribosomal protein S3 [Prevotella bivia JCVIHMP010]
gi|282588816|gb|EFB93941.1| ribosomal protein S3 [Prevotella bivia JCVIHMP010]
Length = 245
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 101/226 (44%), Positives = 148/226 (65%), Gaps = 1/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ W S WF G +G L ED KIR YL L++A +++I+IERT
Sbjct: 1 MGQKVNPISNRLGIIRGWESNWF-GGKNFGESLVEDRKIRAYLNKRLEKASISRIVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I + +ARPG++IGK G D++K++++L N+ EI +++ EV KP+++A ++ +I
Sbjct: 60 LKLVTITICTARPGIVIGKGGQDVDKLKEELKNLFKKEIQINIFEVKKPDLDANIVGNNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E +V +RRA+K AV + MR GA+GVKV +GRLNGAE++R E + EGR PL TLRA
Sbjct: 120 ARQVEGKVAYRRAIKMAVANVMRAGAEGVKVQITGRLNGAEMARKEMFKEGRTPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDY A T G GIKV++ + + D T + + +
Sbjct: 180 DIDYCATEALTKVGLLGIKVWICRGEVYNKVDLTPNFTQEKTNARS 225
>gi|78186075|ref|YP_374118.1| 30S ribosomal protein S3 [Chlorobium luteolum DSM 273]
gi|91207826|sp|Q3B6F6|RS3_PELLD RecName: Full=30S ribosomal protein S3
gi|78165977|gb|ABB23075.1| SSU ribosomal protein S3P [Chlorobium luteolum DSM 273]
Length = 252
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 104/227 (45%), Positives = 151/227 (66%), Gaps = 2/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLK--QAGVAKILIE 58
MGQK+NP FRLG+ W SRW+ + ED IR Y+Q LK +AG+A+I+IE
Sbjct: 1 MGQKVNPTGFRLGIIKDWTSRWYDDSPVISGKIKEDHVIRNYVQTRLKREKAGIARIIIE 60
Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118
RT K+ +I +Y+ARPG ++G+KG +I + ++L +T E+ + V EV KPEI + LI +
Sbjct: 61 RTTKHIKINIYAARPGAVVGRKGEEINNLSQELGRITGKEVKIDVVEVVKPEIESQLIGE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
SIA QLE RV FRRAMK A+Q AMR GA+GV++ +GRL GAE++R E Y EG++PL T+
Sbjct: 121 SIAYQLENRVSFRRAMKMAIQQAMRAGAEGVRIRCAGRLGGAEIARAEQYKEGKIPLHTI 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
RA++DY + A T G+ GIKV+V + ++ I E + +++
Sbjct: 181 RANVDYASVTAHTIAGTIGIKVWVYKGEVLNQRIDAIEEEEMKRIKE 227
>gi|290487112|gb|ADD29940.1| ribosomal protein S3 [Cornus florida]
Length = 218
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 81/218 (37%), Positives = 135/218 (61%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG+ +S WFA+ Y L ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGITQGHHSLWFAQPKNYSEGLQEDQKIRDCVKNYVQKNMRISSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I+Y P L+I + IE+++ +K N N ++++++ + KP
Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKLLIESRPRGIEELQVNLQKEFNCVNRKLNIAITRIAKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
N ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E
Sbjct: 121 YGNPNILAEFIAGQLKNRVSFRKAMKKAIELTEQEDTKGIQVQIAGRIDGKEIARVEWVR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY + A T YG GIK+++ + +E
Sbjct: 181 EGRVPLQTIRAKIDYCSYTARTIYGVLGIKIWIFIDEE 218
>gi|213962924|ref|ZP_03391184.1| ribosomal protein S3 [Capnocytophaga sputigena Capno]
gi|213954581|gb|EEB65903.1| ribosomal protein S3 [Capnocytophaga sputigena Capno]
Length = 246
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 101/216 (46%), Positives = 149/216 (68%), Gaps = 2/216 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ W S W+ G++YG L ED KIR+Y+ L +A VA ++IERT
Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDKLAEDDKIRKYVLARLSKASVAHVIIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + + +ARPG+IIGK G +++K++++L +T +I +++ E+ +PE++A L+A SI
Sbjct: 60 FKLVTVTITTARPGIIIGKGGQEVDKLKEELKKITGKDIQINIFEIKRPELDAALVAASI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E RV ++RA+K A+ SAMR A+G+KV+ SGRLNGAE++R+E + EGR+PL T RA
Sbjct: 120 ARQIEGRVSYKRAIKMAIASAMRMNAEGIKVMISGRLNGAEMARSESFKEGRIPLSTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
IDY A T YG GIKV++ + E+ P
Sbjct: 180 DIDYAIDEAHTTYGRMGIKVWIM-KGEIYGKRELSP 214
>gi|256819988|ref|YP_003141267.1| 30S ribosomal protein S3 [Capnocytophaga ochracea DSM 7271]
gi|256581571|gb|ACU92706.1| ribosomal protein S3 [Capnocytophaga ochracea DSM 7271]
Length = 246
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 101/216 (46%), Positives = 149/216 (68%), Gaps = 2/216 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ W S W+ G++YG L ED KIR+Y+ L +A VA ++IERT
Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDKLAEDDKIRKYVLARLSKASVAHVIIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + + +ARPG+IIGK G +++K++++L +T +I +++ E+ +PE++A L+A SI
Sbjct: 60 FKLVTVTITTARPGIIIGKGGQEVDKLKEELKKITGKDIQINIFEIKRPELDAALVAASI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E RV ++RA+K A+ SAMR A+G+KV+ SGRLNGAE++R+E + EGR+PL T RA
Sbjct: 120 ARQIEGRVSYKRAIKMAIASAMRMNAEGIKVMISGRLNGAEMARSESFKEGRIPLSTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
IDY A T YG GIKV++ + E+ P
Sbjct: 180 DIDYAIDEAHTTYGRMGIKVWIM-KGEIYGKRELSP 214
>gi|330850877|ref|YP_004376627.1| 30S ribosomal protein S3 [Fistulifera sp. JPCC DA0580]
gi|328835697|dbj|BAK18993.1| 30S ribosomal protein S3 [Fistulifera sp. JPCC DA0580]
Length = 214
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 88/212 (41%), Positives = 137/212 (64%), Gaps = 4/212 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +P+ FRLG+ S W+A ++Y +L ED IR Y+ K +A + I R
Sbjct: 1 MGQKTHPLGFRLGITQEHRSTWYANLTQYAEILKEDDAIRTYIHKISKANSIANVNINRN 60
Query: 61 HKNCRI--IVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLI 116
N +I +++ +PG+++G G +EK+ + N+ + ++ ++V EV K +++A+L+
Sbjct: 61 SLNDQIQLNIHTGKPGILVGDLGVGLEKLLSNIKNLLPFDRQLIINVLEVEKVDLSASLL 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
A +A+QLE+RV FRRA++ A+Q A + A+G+K+ SGRLNGAE++R+E EGRVPLQ
Sbjct: 121 ADLVAEQLEKRVAFRRAIREALQRAQKQNANGIKIQVSGRLNGAEIARSEWTREGRVPLQ 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208
TLRA IDY T A T YG GIKV++ + +
Sbjct: 181 TLRADIDYATQEANTIYGVLGIKVWLFKSEIL 212
>gi|325299126|ref|YP_004259043.1| ribosomal protein S3 [Bacteroides salanitronis DSM 18170]
gi|324318679|gb|ADY36570.1| ribosomal protein S3 [Bacteroides salanitronis DSM 18170]
Length = 243
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 99/221 (44%), Positives = 149/221 (67%), Gaps = 1/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ W+S W+ G YG L ED KIR+YL L +A V++I+IERT
Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWY-GGKNYGEALLEDSKIRKYLNARLAKASVSRIVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I V +ARPG+IIGK G +++K++++L +T+ +I +++ EV +PE++A ++A +I
Sbjct: 60 LKLVTITVCTARPGIIIGKGGQEVDKLKEELKKITDKDIQINIFEVKRPELDAVIVANNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E ++ +RRA+K A+ + MR GA+G+KV+ SGRLNGAE++R+E Y EGR PL T RA
Sbjct: 120 ARQVEGKIAYRRAIKTAIANTMRMGAEGIKVLISGRLNGAEMARSEMYKEGRTPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
IDY A T G GIKV++ + + + +
Sbjct: 180 DIDYCHTEALTKVGLLGIKVWICRGEVYGKRELAPNFTQTK 220
>gi|290581283|ref|YP_003485675.1| 30S ribosomal protein S3 [Streptococcus mutans NN2025]
gi|24378382|gb|AAN59624.1|AE015024_16 30S ribosomal protein S3 [Streptococcus mutans UA159]
gi|254998182|dbj|BAH88783.1| 30S ribosomal protein S3 [Streptococcus mutans NN2025]
Length = 208
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 87/206 (42%), Positives = 139/206 (67%), Gaps = 1/206 (0%)
Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVY 69
R+G+ W+++W+A EY LHEDL IR+++Q L A V+ I IER + ++
Sbjct: 1 MRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFIQKELADAAVSTIEIERAVNKVNVSLH 59
Query: 70 SARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV 129
+A+PG++IGK G +++ +R +L+ +T ++H+++ E+ P+++A L+ ++IA+QLE+RV
Sbjct: 60 TAKPGMVIGKGGANVDALRAQLNKLTGKQVHINIVEIKSPDLDAHLVGENIARQLEQRVA 119
Query: 130 FRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189
FRRA K+A+Q MR GA G+K SGRLNGA+++R+E Y EG VPL TLRA IDY A
Sbjct: 120 FRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARSEGYSEGTVPLHTLRADIDYAWEEA 179
Query: 190 ETAYGSCGIKVYVSLRDEVSDSDSTI 215
+T YG G+KV++ + + +T
Sbjct: 180 DTTYGKLGVKVWIYRGEILPARKNTK 205
>gi|189218701|ref|YP_001939342.1| Ribosomal protein S3 [Methylacidiphilum infernorum V4]
gi|226697729|sp|B3E0J0|RS3_METI4 RecName: Full=30S ribosomal protein S3
gi|189185559|gb|ACD82744.1| Ribosomal protein S3 [Methylacidiphilum infernorum V4]
Length = 215
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 97/210 (46%), Positives = 147/210 (70%), Gaps = 2/210 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPILFRL VN W S W+A + + ED +IR++++ L+ A VAKI+IER
Sbjct: 1 MGQKVNPILFRLPVNRQWRSIWYADKKTFPRFIWEDYQIRKFIKKRLESAAVAKIVIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLIAQ 118
RI +++ARPGL+IG++ +++KI++++ + E+ + V EV PE+ A L+A+
Sbjct: 61 GNRVRINIHTARPGLVIGRRAAELDKIKEEIMEIVEKGREVLVDVKEVKHPELEAQLVAE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
+IA Q+ERRV +RRA+KRA+Q M GA G+KV +GRL GAE++R E Y EG+VPL +L
Sbjct: 121 NIALQIERRVAYRRAIKRAMQLTMDAGAVGIKVRCAGRLGGAEIARAERYHEGKVPLHSL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208
RA +DYG A A+T G G+KV++ ++++
Sbjct: 181 RADVDYGFAEAKTVAGKIGVKVWICRKEDI 210
>gi|300728437|ref|ZP_07061799.1| ribosomal protein S3 [Prevotella bryantii B14]
gi|299774356|gb|EFI70986.1| ribosomal protein S3 [Prevotella bryantii B14]
Length = 241
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 102/220 (46%), Positives = 147/220 (66%), Gaps = 1/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLGV W+S WF G +G L ED KIR+YL L +A V++I+IERT
Sbjct: 1 MGQKVNPISNRLGVIRGWDSNWF-GGKNFGDSLVEDQKIRKYLNERLAKASVSRIVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I + +ARPG++IGK G D++K++++L N+ +I +++ EV KPE++AT++A +I
Sbjct: 60 LKLVTITICTARPGIVIGKGGQDVDKLKEELKNLFKKDIQINIFEVKKPELDATIVATNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E +V +RRA+K A+ + MR GA+G+KV +GRLNGAE++R E EGR PL T RA
Sbjct: 120 ARQVEGKVAYRRAIKMAIANTMRAGAEGIKVQITGRLNGAEMARKEMLKEGRTPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
ID+ A A T G GIKV++ + D T +
Sbjct: 180 DIDFCQAEALTKVGLLGIKVWICRGEVYGKRDLTPNFTQD 219
>gi|183221341|ref|YP_001839337.1| 30S ribosomal protein S3 [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189911434|ref|YP_001962989.1| 30S ribosomal protein S3 [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|226697724|sp|B0SA41|RS3_LEPBA RecName: Full=30S ribosomal protein S3
gi|226697725|sp|B0SSH1|RS3_LEPBP RecName: Full=30S ribosomal protein S3
gi|167776110|gb|ABZ94411.1| 30S Ribosomal protein S3 [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167779763|gb|ABZ98061.1| 30S ribosomal protein S3 [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
Length = 225
Score = 232 bits (591), Expect = 4e-59, Method: Composition-based stats.
Identities = 97/214 (45%), Positives = 145/214 (67%), Gaps = 1/214 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI R+G+ W+S WF+ +Y LHED+KIR +LQ K A V KI+IER
Sbjct: 1 MGQKVNPIGLRIGITRNWDSVWFS-KQDYIKNLHEDIKIRRFLQKKFKNASVVKIIIERF 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ + +++++PG++IG+KG +IE ++++L + I +++ EV KPEI A IA+++
Sbjct: 60 PEKINVNLHTSKPGMVIGQKGQNIEAVKQELKKFADKPIGMNIIEVKKPEIIAQAIAETV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A Q+E+R+ FRR MK ++ AMR G +GVK+ SGRLNGA+++RTE Y+EGRVPL TLRA
Sbjct: 120 ALQIEQRMPFRRVMKAELRRAMRGGVEGVKIQISGRLNGADMARTEKYMEGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
ID+G A T +G G+KV+ D + +
Sbjct: 180 KIDFGFKEALTTFGQIGVKVWTYTGDYFPTKEES 213
>gi|32965358|gb|AAP91839.1| ribosomal protein S3 [Ipomoea obscura witches'-broom phytoplasma]
Length = 244
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+WF E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWFVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++ +PG+IIGK G K+ KL +T +++L+V EV + A LI
Sbjct: 61 KEKNKNRITISVHTTKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKIALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAAFEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|300865408|ref|ZP_07110213.1| 30S ribosomal protein S3 [Oscillatoria sp. PCC 6506]
gi|300336591|emb|CBN55363.1| 30S ribosomal protein S3 [Oscillatoria sp. PCC 6506]
Length = 242
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 104/230 (45%), Positives = 146/230 (63%), Gaps = 4/230 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P+ FRLG+ SRWFA Y LL ED KIR+Y+Q +L AG++ + I+R
Sbjct: 1 MGQKIHPVGFRLGITQEHRSRWFADAKNYPELLQEDSKIRQYVQKNLSNAGISSVKIDRK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLIAQ 118
+ V +ARPG+++G+ GT IE++R L +N +I ++V EV + + +ATLIA+
Sbjct: 61 ADQIDLEVQTARPGVVVGRGGTGIEQLRVGLQQQLGSNRQIRINVVEVQRVDADATLIAE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
IAQQLERRV FRR +++A+ A + G +G+K+ SGRLNGAE++RTE EGRVPL TL
Sbjct: 121 YIAQQLERRVSFRRVVRQAITRAQKAGIEGIKIQVSGRLNGAEIARTEWTREGRVPLHTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD--STIPAAEHRVVEKD 226
RA IDY A+T YG G+KV+V + + + A R K
Sbjct: 181 RADIDYSYCTAKTIYGILGVKVWVFKGEIIPGQEDIPAPNAGPPRTKNKG 230
>gi|194334855|ref|YP_002016715.1| 30S ribosomal protein S3 [Prosthecochloris aestuarii DSM 271]
gi|226697745|sp|B4S5C2|RS3_PROA2 RecName: Full=30S ribosomal protein S3
gi|194312673|gb|ACF47068.1| ribosomal protein S3 [Prosthecochloris aestuarii DSM 271]
Length = 251
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 104/226 (46%), Positives = 151/226 (66%), Gaps = 2/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ--AGVAKILIE 58
MGQK+NP FRLG+ W SRW+ L +D IR Y+Q LK+ AG+AKI+IE
Sbjct: 1 MGQKVNPTGFRLGIIRDWTSRWYDDSPVIAEKLKQDHVIRNYVQARLKRERAGIAKIVIE 60
Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118
RT K+ +I +++ARPG ++G+KG +I + ++LS +T E+ + V EV KPEI A LI +
Sbjct: 61 RTTKHIKINIFAARPGAVVGRKGEEINNLSQELSRITGREVKIDVIEVIKPEIEAQLIGE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
+IA QLE RV FRRAMK+A+Q AMR GA+G+++ +GRL G E++R+E Y EG++PL TL
Sbjct: 121 NIAYQLENRVSFRRAMKQAIQQAMRAGAEGIRIRCAGRLGGVEIARSEQYKEGKIPLHTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
RA++DY + A T G+ GIKV+V + + I E + ++
Sbjct: 181 RANVDYASVTAHTIAGAIGIKVWVYKGEVLVQRIDAIEEDELKKIK 226
>gi|730658|sp|P41119|RS3_ANAAB RecName: Full=30S ribosomal protein S3
gi|456692|gb|AAA22058.1| ribosomal protein S3 [Anaeroplasma abactoclasticum]
Length = 251
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 94/213 (44%), Positives = 142/213 (66%), Gaps = 5/213 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK++P+ R+G+N W++ W+A ++ LL EDLKIR+Y+ +A +++++IER
Sbjct: 1 MGQKVSPMGLRVGINREWDAAWYAEKTQVANLLLEDLKIRKYINEVYAKAAISRVIIERV 60
Query: 60 ----THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATL 115
+I +++A+PG++IG + K+ K+L +T I L+V EV +PE++ATL
Sbjct: 61 KGPNNKDRVKITLHTAKPGVVIGHEAETKNKVVKELGFITKKNIILNVVEVRRPELDATL 120
Query: 116 IAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPL 175
+A+SIA+QLE R FRR K A+Q A++ GA G K + SGRL GAE++R+E Y EG+VPL
Sbjct: 121 VAKSIAEQLEARASFRRVQKVAIQRALKAGAKGAKTLISGRLGGAEIARSEGYNEGQVPL 180
Query: 176 QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208
QTLRA +DY A A T YG GIKV++ +
Sbjct: 181 QTLRADVDYAVAEAHTTYGKLGIKVWIYKGEVF 213
>gi|34501443|ref|NP_904230.1| ribosomal protein S3 [Physcomitrella patens subsp. patens]
gi|68052968|sp|Q6YXK8|RR3_PHYPA RecName: Full=30S ribosomal protein S3, chloroplastic
gi|34494813|dbj|BAC85080.1| ribosomal protein S3 [Physcomitrella patens subsp. patens]
Length = 218
Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats.
Identities = 83/218 (38%), Positives = 133/218 (61%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ--------AGV 52
MGQKINP+ FRLGV +S WFA+ Y LL ED K+R ++ ++ + G+
Sbjct: 1 MGQKINPLGFRLGVTQNHHSYWFAQPKNYSKLLQEDQKMRNCIENYVYKNIRNSSNYGGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPKP 109
A+I I+R ++ +++ P L++ + IE+++ + ++ + ++ +++ EV KP
Sbjct: 61 ARIEIKRKTDLIQVEIHTGFPALLVENRKRGIEQLKTDVQSILTSGDRKLRMTLTEVTKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
++A+ IA QLE RV FRR MK+A++ A + G+K+ +GRLNGAE++R E
Sbjct: 121 YGEPNILAEYIALQLESRVAFRRTMKKAIELAKKTNIKGIKIQIAGRLNGAEIARVEWAR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQTLRA IDY A+T YG GIK+++ ++
Sbjct: 181 EGRVPLQTLRAKIDYCYYPAQTIYGVLGIKIWIFQDEK 218
>gi|12751545|ref|NP_043610.2| ribosomal protein S3 [Odontella sinensis]
gi|1350891|sp|P49491|RR3_ODOSI RecName: Full=30S ribosomal protein S3, chloroplastic
gi|13620209|emb|CAA91642.2| 30S ribosomal protein S3 [Odontella sinensis]
Length = 214
Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats.
Identities = 87/212 (41%), Positives = 134/212 (63%), Gaps = 4/212 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +P+ FRLG+ S W+A ++Y LL ED +IR YL K A ++ I I R
Sbjct: 1 MGQKTHPLGFRLGITQEHRSAWYANFNQYANLLKEDNQIRTYLNKLAKTASISNIQINRN 60
Query: 61 --HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLI 116
++ + + RPG+++G+ GT I+ + + + N ++ +++ EV K +NA+LI
Sbjct: 61 GLSDQIQLNIETGRPGVLVGENGTGIKTLLSNIKKILPPNRQLTINIIEVEKVNLNASLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
+ +QLE RV FR+A+++A+QSA+ +G+K+ SGRLNGAE++R+E EGRVPLQ
Sbjct: 121 GDLVVEQLEDRVAFRKAIRKAMQSALDENVNGIKIQVSGRLNGAEIARSEWIREGRVPLQ 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208
TLRA IDY T A T YG G+KV++ + +
Sbjct: 181 TLRADIDYATKEAHTIYGVLGVKVWLFKSEIL 212
>gi|189347697|ref|YP_001944226.1| 30S ribosomal protein S3 [Chlorobium limicola DSM 245]
gi|226697678|sp|B3EGY4|RS3_CHLL2 RecName: Full=30S ribosomal protein S3
gi|189341844|gb|ACD91247.1| ribosomal protein S3 [Chlorobium limicola DSM 245]
Length = 251
Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats.
Identities = 102/226 (45%), Positives = 149/226 (65%), Gaps = 2/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLK--QAGVAKILIE 58
MGQK+NP FRLG+ W SRW+ + +D IR Y+ LK +AG+A+I+IE
Sbjct: 1 MGQKVNPTGFRLGIIKDWTSRWYDDSPVISEKIKQDHVIRNYVLARLKREKAGIARIVIE 60
Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118
RT K+ +I +Y+ARPG ++G+KG +I + ++L+ +T E+ + V EV KPEI A LI
Sbjct: 61 RTTKHVKINIYAARPGAVVGRKGEEINNLSQELTRITGKEVKIDVVEVIKPEIEAQLIGD 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
+IA QLE RV FRRAMK+A+Q AMR GA+G+++ +GRL GAE++R E Y EG++PL T+
Sbjct: 121 NIAYQLENRVSFRRAMKQAIQQAMRAGAEGIRIRCAGRLGGAEIARAEQYKEGKIPLHTI 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
RA+IDY + A T G+ GIKV+V + + I E + ++
Sbjct: 181 RANIDYASVTAHTIAGTIGIKVWVYKGEVLVQRIDAIEEDEMKRMK 226
>gi|315225407|ref|ZP_07867221.1| 30S ribosomal protein S3 [Capnocytophaga ochracea F0287]
gi|314944680|gb|EFS96715.1| 30S ribosomal protein S3 [Capnocytophaga ochracea F0287]
Length = 246
Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats.
Identities = 101/216 (46%), Positives = 150/216 (69%), Gaps = 2/216 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ W S W+ G++YG L ED KIR+Y+ L +A VA ++IERT
Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDKLAEDDKIRKYVLARLSKASVAHVIIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + + +ARPG+IIGK G +++K++++L +T+ +I +++ E+ +PE++A L+A SI
Sbjct: 60 FKLVTVTITTARPGIIIGKGGQEVDKLKEELKKITSKDIQINIFEIKRPELDAALVAASI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E RV ++RA+K A+ SAMR A+G+KV+ SGRLNGAE++R+E + EGR+PL T RA
Sbjct: 120 ARQIEGRVSYKRAIKMAIASAMRMNAEGIKVMISGRLNGAEMARSESFKEGRIPLSTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
IDY A T YG GIKV++ + E+ P
Sbjct: 180 DIDYAIDEAHTTYGRMGIKVWIM-KGEIYGKRELSP 214
>gi|313158326|gb|EFR57728.1| ribosomal protein S3 [Alistipes sp. HGB5]
Length = 263
Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats.
Identities = 96/205 (46%), Positives = 142/205 (69%), Gaps = 1/205 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ W+S WF G ++ L ED KIR+YL L +A ++KI+IERT
Sbjct: 1 MGQKVNPIANRLGIIRGWDSNWF-GGKDFSEKLVEDAKIRKYLNVRLAKASISKIIIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + + +ARPG+IIGK G +++K++++L +T EI +++ EV +PE++A ++ Q+I
Sbjct: 60 LKLVTVTISTARPGIIIGKGGQEVDKLKEELKKLTGKEIQINIFEVKRPEVDAVIVGQNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE RV FRRA+K AV S MR GA+G+K+ SGR+ GAE++R+E EGR+PL T RA
Sbjct: 120 ARQLEGRVSFRRAVKTAVASTMRMGAEGIKIQVSGRVGGAEMARSETIKEGRIPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLR 205
+D+ A T G G+KV++
Sbjct: 180 DVDFCLTEALTKVGILGVKVWICQG 204
>gi|4927746|gb|AAD33262.1|AF126059_3 RpS3 [Streptococcus pneumoniae]
gi|4927755|gb|AAD33271.1| RpS3 [Streptococcus pneumoniae]
gi|4927764|gb|AAD33280.1| RpS3 [Streptococcus pneumoniae]
Length = 208
Score = 231 bits (588), Expect = 7e-59, Method: Composition-based stats.
Identities = 89/206 (43%), Positives = 139/206 (67%), Gaps = 1/206 (0%)
Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVY 69
R+G+ W+++W+A EY LHEDL IR+++Q L A V+ I IER + ++
Sbjct: 1 MRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFVQKELADAAVSTIEIERAVNKVNVSLH 59
Query: 70 SARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV 129
+A+PG++IGK G +++ +R KL+ +T ++H+++ E+ +P+++A L+ + IA+QLE+RV
Sbjct: 60 TAKPGMVIGKGGANVDALRAKLNKLTGKQVHINIIEIKQPDLDAHLVGEGIARQLEQRVA 119
Query: 130 FRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189
FRRA K+A+Q AMR GA G+K SGRLNGA+++R E Y EG VPL TLRA IDY A
Sbjct: 120 FRRAQKQAIQRAMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRADIDYAWEEA 179
Query: 190 ETAYGSCGIKVYVSLRDEVSDSDSTI 215
+T YG G+KV++ + + +T
Sbjct: 180 DTTYGKLGVKVWIYRGEVLPARKNTK 205
>gi|110598093|ref|ZP_01386371.1| ribosomal protein S3 [Chlorobium ferrooxidans DSM 13031]
gi|110340225|gb|EAT58722.1| ribosomal protein S3 [Chlorobium ferrooxidans DSM 13031]
Length = 251
Score = 231 bits (588), Expect = 7e-59, Method: Composition-based stats.
Identities = 103/227 (45%), Positives = 150/227 (66%), Gaps = 2/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ--AGVAKILIE 58
MGQK+NP FRLG+ W SRW+ + +D IR Y+ LK+ AG+A+I+IE
Sbjct: 1 MGQKVNPTGFRLGIIRDWTSRWYDDSPVISEKIKQDHVIRNYVIARLKRERAGIARIVIE 60
Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118
RT K+ +I +Y+ARPG ++G+KG +I + ++LS +T E+ + V EV KPEI A LI
Sbjct: 61 RTTKHVKINIYAARPGAVVGRKGEEINNLSQELSRITGKEVKIDVVEVVKPEIEAQLIGD 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
+IA QLE RV FRRAMK+A+Q AMR GA+GV++ +GRL GAE++R E Y EG++PL T+
Sbjct: 121 NIAYQLENRVSFRRAMKQAIQQAMRSGAEGVRIRCAGRLGGAEIARAEQYKEGKIPLHTI 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
RA++DY + A T G+ GIKV+V + + I E + +++
Sbjct: 181 RANVDYASVTAHTIAGTIGIKVWVYKGEVLVQRIDAIEEDELKRIKE 227
>gi|38426832|gb|AAR20458.1| ribosomal protein S3 [Candidatus Phytoplasma australiense]
Length = 239
Score = 231 bits (588), Expect = 7e-59, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 135/215 (62%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW+S+W E AL+ ED IR+ + K+ +++I I+R
Sbjct: 1 MGQKTNPNGLRLGIIRTWDSQWCVNDKEIPALIKEDFLIRQLINNFSKRNSISQIEIQRL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
T I +++A+PG+IIGK G KI+ +L +T +I+L++ EV P+ A L+
Sbjct: 61 KEKTKNRITITIHTAKPGIIIGKDGETRNKIQAQLKKLTQKDINLNILEVKNPDKTAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A + GA G+KV+ SGRLNG E++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMKFRRVQKMAIQKAFKAGAKGIKVLISGRLNGDEIARSERHDEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAALEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|78189801|ref|YP_380139.1| 30S ribosomal protein S3 [Chlorobium chlorochromatii CaD3]
gi|91207646|sp|Q3APH9|RS3_CHLCH RecName: Full=30S ribosomal protein S3
gi|78172000|gb|ABB29096.1| SSU ribosomal protein S3P [Chlorobium chlorochromatii CaD3]
Length = 253
Score = 231 bits (588), Expect = 8e-59, Method: Composition-based stats.
Identities = 102/226 (45%), Positives = 148/226 (65%), Gaps = 2/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ--AGVAKILIE 58
MGQK+NP FRLG+ W SRW+ + +D IR Y+ LK+ AG+A+I IE
Sbjct: 1 MGQKVNPTGFRLGIIRDWTSRWYDDSPVISEKIKQDHIIRNYVLARLKKERAGIARINIE 60
Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118
RT K+ +I +Y+ARPG ++G+KG +I + ++LS + E+ + V EV KPEI A LI +
Sbjct: 61 RTTKHVKINIYAARPGAVVGRKGEEINNLSQELSRIIGKEVKIDVVEVIKPEIEAQLIGE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
+IA QLE RV FRRAMK+A+Q AMR GA+GV++ +GRL GAE++R E Y EG++PL T+
Sbjct: 121 NIAYQLENRVSFRRAMKQAIQQAMRAGAEGVRIRCAGRLGGAEIARAEQYKEGKIPLHTI 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
RA++DY + A T G+ GIKV+V + + I E + ++
Sbjct: 181 RANVDYASVTAHTIAGTIGIKVWVYKGEVLVQRIDAIEEDEMKKMK 226
>gi|307297388|ref|ZP_07577194.1| ribosomal protein S3 [Thermotogales bacterium mesG1.Ag.4.2]
gi|306916648|gb|EFN47030.1| ribosomal protein S3 [Thermotogales bacterium mesG1.Ag.4.2]
Length = 209
Score = 231 bits (588), Expect = 8e-59, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 142/208 (68%), Gaps = 2/208 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLGV+ W +RW Y L EDLKIR++L+ + AGV+ I IER
Sbjct: 1 MGQKVHPYGFRLGVSKDWKARWI-NEKNYKEYLLEDLKIRDFLKKNYMAAGVSDIYIERP 59
Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
I V ARPG++IGKKG++++ +R++L + + L++ EV PE +A L+A+
Sbjct: 60 EPGKVVITVKCARPGVMIGKKGSEVKLLRQRLEKLITRQFQLNIEEVKTPETDAILVAED 119
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA ++E+R ++RAMKRA+ +AMR GA G+K++ SGRLNGA+++RTE YLEGR+PLQTLR
Sbjct: 120 IASRIEKRASYKRAMKRAIFTAMRKGARGIKIMVSGRLNGADIARTEWYLEGRLPLQTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDE 207
A +DYG A T G G+KV++ D
Sbjct: 180 ADLDYGYTTAFTKMGIIGVKVWIYKGDV 207
>gi|58379061|gb|AAW72452.1| ribosomal protein S3 [Paulownia witches'-broom phytoplasma]
Length = 252
Score = 231 bits (588), Expect = 8e-59, Method: Composition-based stats.
Identities = 95/215 (44%), Positives = 132/215 (61%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++A+PG+IIGK G K+ KL +T +++L+V EV + NA LI
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKNALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|48374164|gb|AAT41877.1| 30S ribosomal subunit S3 [Fremyella diplosiphon Fd33]
Length = 253
Score = 231 bits (588), Expect = 8e-59, Method: Composition-based stats.
Identities = 104/225 (46%), Positives = 144/225 (64%), Gaps = 7/225 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL-----KQAGVAKI 55
MGQKI+P+ FRLG+ SRWFA +Y LL ED K+R+Y++ L AG++++
Sbjct: 1 MGQKIHPVGFRLGITQEHQSRWFAVPDKYPELLQEDYKLRQYIEQKLGRLAQNNAGISEV 60
Query: 56 LIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINA 113
IER + V +ARPG+++G+ G IE +R L + +N +I ++V EV + + +A
Sbjct: 61 RIERKADQIDLEVRTARPGVVVGRGGQGIESLRTGLQELLGSNRQIRINVVEVQRVDADA 120
Query: 114 TLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV 173
LIA+ IAQQLERRV FRR +++A+Q A R G G+KV SGRLNGAE++RTE EGRV
Sbjct: 121 YLIAEYIAQQLERRVSFRRVVRQAIQRAQRAGVQGIKVQVSGRLNGAEIARTEWTREGRV 180
Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
PL TLRA IDY A+T YG GIKV+V + + + PA
Sbjct: 181 PLHTLRADIDYSYCTAKTVYGILGIKVWVFKGEIIPGQEEAAPAP 225
>gi|27734511|sp|Q8VQR8|RS3_PHYPY RecName: Full=30S ribosomal protein S3
gi|18042127|gb|AAL57843.1|AF453327_3 ribosomal protein S3 [Phytoplasma sp. PY1]
gi|50345841|gb|AAT74863.1| ribosomal protein S3 [Paulownia witches'-broom phytoplasma]
Length = 252
Score = 231 bits (588), Expect = 8e-59, Method: Composition-based stats.
Identities = 95/215 (44%), Positives = 132/215 (61%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++A+PG+IIGK G K+ KL +T +++L+V EV + NA LI
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKNALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|306486205|gb|ADM92744.1| ribosomal protein S3 [Franklinia alatamaha]
Length = 218
Score = 231 bits (588), Expect = 9e-59, Method: Composition-based stats.
Identities = 79/218 (36%), Positives = 132/218 (60%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG +S WFA+ Y L ED KIR+++Q ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQDHHSLWFAQPKNYSEGLEEDQKIRDFIQNYVQKNMRISSGIEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I+Y P L+I + I++++ +K N ++++++ + KP
Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKLLIESRPRGIDELQMNLQKEFNCLKRKLNIAITRIAKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
N ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E
Sbjct: 121 YGNPNILAEFIAGQLKNRVSFRKAMKKAIELTEQTDTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY T YG GIK+++ + +E
Sbjct: 181 EGRVPLQTIRAKIDYCFYTVRTIYGVLGIKIWIFIDEE 218
>gi|269124032|ref|YP_003306609.1| 30S ribosomal protein S3 [Streptobacillus moniliformis DSM 12112]
gi|268315358|gb|ACZ01732.1| ribosomal protein S3 [Streptobacillus moniliformis DSM 12112]
Length = 219
Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats.
Identities = 98/215 (45%), Positives = 145/215 (67%), Gaps = 2/215 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFA-RGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER 59
MGQK++P R+G+ TW+S+WFA +G EY HEDLKIREY++ + QAG++ I IER
Sbjct: 1 MGQKVDPRGMRIGIVKTWDSKWFARKGKEYLNNFHEDLKIREYIKKNYYQAGISSIAIER 60
Query: 60 -THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118
+ IIV + + ++IG+KG +I +R KL NMT ++ + E+ P +A L+A+
Sbjct: 61 VSENEITIIVSTGKAAVLIGRKGAEITALRAKLENMTGKKVFVKALEIKNPNRDAQLVAE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
SIA +E+RV ++RA+++A+Q A + G G+KV+ SGRLNGAE++R+E L GRVPL TL
Sbjct: 121 SIATAIEKRVAYKRAVQQAIQRAEKAGVLGIKVMTSGRLNGAEIARSEWTLSGRVPLHTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
RA +DY TA A T YG+ GIKV++ + +
Sbjct: 181 RADVDYATATAHTTYGALGIKVWIFNGEVLPTKKE 215
>gi|161897993|gb|ABX80107.1| ribosomal protein S3 [Lilium sp. phytoplasma NECu2]
Length = 232
Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats.
Identities = 95/215 (44%), Positives = 132/215 (61%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQKINP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKINPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVDKLKELTQKDVNLNVLEVKNSDKIALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAALEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|308191282|gb|ADO16223.1| ribosomal protein S3 [Cherry bunchy leaf phytoplasma]
Length = 237
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKVALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|159135078|gb|ABW88127.1| ribosomal protein S3 [Carrot phytoplasma sp. ca2006/9]
Length = 236
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKIALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|51209937|ref|YP_063601.1| ribosomal protein S3 [Gracilaria tenuistipitata var. liui]
gi|68052935|sp|Q6B8V9|RR3_GRATL RecName: Full=30S ribosomal protein S3, chloroplastic
gi|50657691|gb|AAT79676.1| 30S ribosomal protein S3 [Gracilaria tenuistipitata var. liui]
Length = 217
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 89/214 (41%), Positives = 135/214 (63%), Gaps = 2/214 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +P+ FR+G+ S WF+ Y L ED KIR ++ L A ++ I I+R
Sbjct: 1 MGQKTHPLGFRIGITRDHKSSWFSNMKSYPKLAQEDYKIRSCIEKQLHNASISLIYIDRK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATLIAQ 118
++ +++ARPG+I+GK G +E +RKKL + +I +++ E+ P+ ATLIA+
Sbjct: 61 VDQVQVHIHTARPGIILGKMGRGLEDLRKKLETTLKNDTQIRINLIEITDPDKEATLIAE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
I QQLE+R+ FRR +++A+Q + + G+K+ SGRLNGAE++R+E EGRVPLQTL
Sbjct: 121 FIVQQLEKRIAFRRVIRQAMQRSQKAKNQGIKIQVSGRLNGAEIARSEWVREGRVPLQTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
RAHIDY A T YG G+KV++ +++
Sbjct: 181 RAHIDYSYKTAHTIYGILGVKVWLFKGEKIITDK 214
>gi|56751880|ref|YP_172581.1| 30S ribosomal protein S3 [Synechococcus elongatus PCC 6301]
gi|81301035|ref|YP_401243.1| 30S ribosomal protein S3 [Synechococcus elongatus PCC 7942]
gi|3122820|sp|O24695|RS3_SYNP6 RecName: Full=30S ribosomal protein S3
gi|123755336|sp|Q31L13|RS3_SYNE7 RecName: Full=30S ribosomal protein S3
gi|2446896|dbj|BAA22455.1| 30S ribosomal protein S3 [Synechococcus elongatus PCC 6301]
gi|56686839|dbj|BAD80061.1| 30S ribosomal protein S3 [Synechococcus elongatus PCC 6301]
gi|81169916|gb|ABB58256.1| SSU ribosomal protein S3P [Synechococcus elongatus PCC 7942]
Length = 244
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 100/220 (45%), Positives = 142/220 (64%), Gaps = 3/220 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP+ FRLGV SRWFA + Y LL ED KIR+Y++ +L AG+A I +ER
Sbjct: 1 MGQKINPVGFRLGVTQEHRSRWFADPNRYPQLLQEDKKIRDYVRKNLSNAGIADIRVERK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIA 117
+ + +ARPG+++G+ G I+ +R + L ++ +I ++V EV + + +A L+
Sbjct: 61 ADQVELEIRTARPGVVVGRGGAGIDTLREGLQALLKDSSRQIRINVIEVERVDADAALLG 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ IAQQLERRV FRR +++A+Q A R G G+K+ +GRLNGAE++RTE EGRVPL T
Sbjct: 121 EYIAQQLERRVAFRRCVRQAIQRAQRAGVQGIKIQVAGRLNGAEIARTEWTREGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
LRA IDY A T YG GIKV+V + + + P+
Sbjct: 181 LRADIDYAYTTATTTYGILGIKVWVFRGEIIPGQEDAAPS 220
>gi|118411065|ref|YP_874460.1| 30S ribosomal protein S3 [Phaeodactylum tricornutum]
gi|125987747|sp|A0T0I5|RR3_PHATC RecName: Full=30S ribosomal protein S3, chloroplastic
gi|116739812|gb|ABK20683.1| 30S ribosomal protein S3 [Phaeodactylum tricornutum]
Length = 214
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 86/212 (40%), Positives = 133/212 (62%), Gaps = 4/212 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +P+ FRLG+ S W+A ++Y +L ED KIR Y+ K +A + I R
Sbjct: 1 MGQKTHPLGFRLGITQEHKSTWYANFNQYANILKEDDKIRTYIHTISKANSIANVRINRN 60
Query: 61 HKNCRI--IVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLI 116
N +I + + +PG+++G G +E + + N ++ ++V EV K +++A+L+
Sbjct: 61 GLNDQIQLNIETGKPGILVGDLGAGLETLLNNVKKFLPANRQLTINVLEVEKVDLDASLL 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
A +A+QLE+R+ FRRA++ A+Q A + +G+K+ SGRLNGAE++R+E EGRVPLQ
Sbjct: 121 ADLVAEQLEKRIAFRRAIREALQRAQKQNVNGIKIQVSGRLNGAEIARSEWIREGRVPLQ 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208
TLRA IDY T A T YG GIKV++ + +
Sbjct: 181 TLRADIDYATQEANTIYGVLGIKVWLFKSEIL 212
>gi|254425252|ref|ZP_05038970.1| ribosomal protein S3 [Synechococcus sp. PCC 7335]
gi|196192741|gb|EDX87705.1| ribosomal protein S3 [Synechococcus sp. PCC 7335]
Length = 243
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 98/222 (44%), Positives = 139/222 (62%), Gaps = 3/222 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+PI RLG+ SRW+A + Y LL ED IREY+ +L AG++ + IER
Sbjct: 1 MGQKIHPIGLRLGITQEHRSRWYADKNRYPELLEEDHNIREYVIKNLANAGISDVHIERK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIA 117
+ V +ARPG+++G+ G IE +R +K + +I ++V EV K + +A LI
Sbjct: 61 ADQIDLEVRTARPGVVVGRGGAGIESLRSGLQKQIKDDSRQIRINVVEVSKVDADAGLIC 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ I QQLERRV FRR +++A+Q A R G +G+K+ SGRLNGAE++RTE EGRVPL T
Sbjct: 121 EYITQQLERRVSFRRVVRQAIQRAQRAGVEGIKIQVSGRLNGAEIARTEWTREGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
LRA+IDY A+T YG G+K +V + + +S +
Sbjct: 181 LRANIDYAYRTAQTTYGILGVKTWVFKGEVIPGQESQPEESR 222
>gi|38426840|gb|AAR20464.1| ribosomal protein S3 [Candidatus Phytoplasma australiense]
Length = 242
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 135/215 (62%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW+S+W E AL+ ED IR+ + K+ +++I I+R
Sbjct: 1 MGQKTNPNGLRLGIIRTWDSQWCVNDKEIPALIKEDFLIRQLINNFSKRNSISQIEIQRL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
T I +++A+PG+IIGK G KI+ +L +T +I+L++ EV P+ A L+
Sbjct: 61 KEKTKNRITITIHTAKPGIIIGKDGETRNKIQAQLKKLTQKDINLNILEVKNPDKTAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A + GA G+KV+ SGRLNG E++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMKFRRVQKMAIQKAFKAGAKGIKVLISGRLNGDEIARSERHDEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAALEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|76798223|ref|ZP_00780473.1| ribosomal protein S3 [Streptococcus agalactiae 18RS21]
gi|77406119|ref|ZP_00783193.1| ribosomal protein S3 [Streptococcus agalactiae H36B]
gi|77409628|ref|ZP_00786301.1| ribosomal protein S3 [Streptococcus agalactiae COH1]
gi|77412288|ref|ZP_00788604.1| ribosomal protein S3 [Streptococcus agalactiae CJB111]
gi|77414567|ref|ZP_00790710.1| ribosomal protein S3 [Streptococcus agalactiae 515]
gi|209558633|ref|YP_002285105.1| 30S ribosomal protein S3 [Streptococcus pyogenes NZ131]
gi|21903763|gb|AAM78653.1| 30S ribosomal protein S3 [Streptococcus pyogenes MGAS315]
gi|28810205|dbj|BAC63143.1| 30S ribosomal protein S3 [Streptococcus pyogenes SSI-1]
gi|76586432|gb|EAO62940.1| ribosomal protein S3 [Streptococcus agalactiae 18RS21]
gi|77159365|gb|EAO70533.1| ribosomal protein S3 [Streptococcus agalactiae 515]
gi|77161678|gb|EAO72673.1| ribosomal protein S3 [Streptococcus agalactiae CJB111]
gi|77171751|gb|EAO74947.1| ribosomal protein S3 [Streptococcus agalactiae COH1]
gi|77175300|gb|EAO78095.1| ribosomal protein S3 [Streptococcus agalactiae H36B]
gi|209539834|gb|ACI60410.1| SSU ribosomal protein S3p (S3e) [Streptococcus pyogenes NZ131]
Length = 208
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 86/206 (41%), Positives = 138/206 (66%), Gaps = 1/206 (0%)
Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVY 69
R+G+ W+++W+A EY LHEDL IR+++ L A V+ I IER + ++
Sbjct: 1 MRVGIIRDWDAKWYAE-KEYADYLHEDLAIRKFINKELADASVSTIEIERAVNKVIVSLH 59
Query: 70 SARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV 129
+A+PG++IGK G +++ +R +L+ +T ++H+++ E+ +P+++A L+ ++IA+QLE+RV
Sbjct: 60 TAKPGMVIGKGGANVDALRGQLNKLTGKQVHINIIEIKQPDLDAHLVGENIARQLEQRVA 119
Query: 130 FRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189
FRRA K+A+Q MR GA G+K SGRLNGA+++R E Y EG VPL TLRA IDY A
Sbjct: 120 FRRAQKQAIQRTMRAGAKGIKTQVSGRLNGADIARAEGYSEGTVPLHTLRADIDYAWEEA 179
Query: 190 ETAYGSCGIKVYVSLRDEVSDSDSTI 215
+T YG G+KV++ + + +T
Sbjct: 180 DTTYGKLGVKVWIYRGEVLPARKNTK 205
>gi|197294625|ref|YP_001799166.1| 30S ribosomal protein S3 [Candidatus Phytoplasma australiense]
gi|226697743|sp|B1VAE2|RS3_PHYAS RecName: Full=30S ribosomal protein S3
gi|171853952|emb|CAM11915.1| 30S ribosomal protein S3 [Candidatus Phytoplasma australiense]
Length = 250
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 135/215 (62%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW+S+W E AL+ ED IR+ + K+ +++I I+R
Sbjct: 1 MGQKTNPNGLRLGIIRTWDSQWCVNDKEIPALIKEDFLIRQLINNFSKRNSISQIEIQRL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
T I +++A+PG+IIGK G KI+ +L +T +I+L++ EV P+ A L+
Sbjct: 61 KEKTKNRITITIHTAKPGIIIGKDGETRNKIQAQLKKLTQKDINLNILEVKNPDKTAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A + GA G+KV+ SGRLNG E++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMKFRRVQKMAIQKAFKAGAKGIKVLISGRLNGDEIARSERHDEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAALEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|11465995|ref|NP_054537.1| ribosomal protein S3 [Nicotiana tabacum]
gi|78102577|ref|YP_358717.1| ribosomal protein S3 [Nicotiana sylvestris]
gi|133939|sp|P06357|RR3_TOBAC RecName: Full=30S ribosomal protein S3, chloroplastic
gi|91207771|sp|Q3C1L6|RR3_NICSY RecName: Full=30S ribosomal protein S3, chloroplastic
gi|11865|emb|CAA77381.1| ribosomal protein S3 [Nicotiana tabacum]
gi|77799604|dbj|BAE46693.1| ribosomal protein S3 [Nicotiana sylvestris]
gi|225235|prf||1211235BT ribosomal protein S3
Length = 218
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 78/218 (35%), Positives = 133/218 (61%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG +S WF++ Y L ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFSQPKNYSEGLQEDQKIRDCIKNYVQKNMRTSSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I++ P L+I + IE+++ +K + N +++++V + KP
Sbjct: 61 ARIEIQKRIDLIQVIIFMGFPKLLIESRPRGIEELQTTLQKEFHCVNRKLNIAVTRIAKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
N ++A+ IA QL+ RV FR+AMK+A++ + G+++ +GR++G E++R E
Sbjct: 121 YGNPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY + T YG GIK+++ L +E
Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFLDEE 218
>gi|159135081|gb|ABW88129.1| ribosomal protein S3 [Broccoli phytoplasma sp. br273]
Length = 237
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKIALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|328949271|ref|YP_004366608.1| ribosomal protein S3 [Treponema succinifaciens DSM 2489]
gi|328449595|gb|AEB15311.1| ribosomal protein S3 [Treponema succinifaciens DSM 2489]
Length = 250
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 101/207 (48%), Positives = 138/207 (66%), Gaps = 2/207 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL--QCHLKQAGVAKILIE 58
MGQK+NPI RLGVN TW SRW+A EY L ED+KIR+ + K A +A+I I
Sbjct: 1 MGQKVNPIGLRLGVNKTWQSRWYADSREYADLFLEDMKIRKLVGSLPECKNADIAEIEIV 60
Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118
R + I++++ARPG+IIG KG IEKI + ++ + + E+ +PEINA+LIAQ
Sbjct: 61 RHPQRVTIVIHTARPGVIIGVKGATIEKISADIQKQLTKKVQIKIKEIKRPEINASLIAQ 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
++ +QL R FR+A+K++ +AM+ GA G+K+ SGRL GA+++R+E EGRVPL TL
Sbjct: 121 NVGRQLAGRGSFRKALKQSASNAMKGGAQGIKIRISGRLGGADMTRSEELKEGRVPLHTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLR 205
RA IDYGT A T YG GIKV+V
Sbjct: 181 RADIDYGTYEALTTYGKIGIKVWVYNG 207
>gi|118411197|ref|YP_874591.1| 30S ribosomal protein S3 [Thalassiosira pseudonana]
gi|125987749|sp|A0T0X9|RR3_THAPS RecName: Full=30S ribosomal protein S3, chloroplastic
gi|116739944|gb|ABK20814.1| 30S ribosomal protein S3 [Thalassiosira pseudonana]
Length = 214
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 91/212 (42%), Positives = 125/212 (58%), Gaps = 4/212 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +P+ FRLG+ S W+A Y LL ED KIR YL K A ++ I I R
Sbjct: 1 MGQKTHPLGFRLGITQEHRSAWYADFKHYSTLLEEDDKIRTYLNKLAKLASISDIHINRN 60
Query: 61 HKNCRI--IVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLI 116
+I + + RPG+++G G+ I+ + + N +I ++V EV NA+LI
Sbjct: 61 GLGDQIELNIETGRPGILVGDNGSGIKTLATNIKKFIPNNRQITINVVEVENVNANASLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
A + QQLE RV FRRA++ A+Q +G+KV SGRLNGAE++R+E EGRVPLQ
Sbjct: 121 ADLVVQQLEDRVAFRRAIREALQCLQDNQVNGIKVEVSGRLNGAEMARSEWIREGRVPLQ 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208
TLRA IDY T A T YG G+KV++ + +
Sbjct: 181 TLRADIDYATKEANTIYGVLGVKVWLFKNEIL 212
>gi|223931038|ref|YP_002586898.1| ribosomal protein S3 [Syntrichia ruralis]
gi|219562252|gb|ACL27583.1| ribosomal protein S3 [Syntrichia ruralis]
Length = 218
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 83/214 (38%), Positives = 132/214 (61%), Gaps = 11/214 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ--------AGV 52
MGQKINP+ FRLGV + NS WFA+ Y LL ED KIR ++ ++ + G+
Sbjct: 1 MGQKINPLGFRLGVIQSHNSYWFAQPKNYSKLLQEDQKIRHCIENYVYKNIRNSSNYGGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPKP 109
A++ I+R ++ +++ P L++ +G IE+++ + + + ++ +++ E+ KP
Sbjct: 61 ARVEIKRKTDLIQVEIHTGFPALLVENRGRGIEQLKTDVQTILTPGDRKLRMTLTEITKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
++A+ IA QLE RV FRR MK+A++ A + G+K+ +GRLNGAE++R E
Sbjct: 121 YGEPNILAEYIALQLESRVAFRRTMKKAIELAKKTNIKGIKIQIAGRLNGAEIARVEWAR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
EGRVPLQT+RA IDY A+T YG GIK+++
Sbjct: 181 EGRVPLQTIRAKIDYCYYPAQTIYGVLGIKIWIF 214
>gi|196018443|ref|XP_002118805.1| hypothetical protein TRIADDRAFT_34776 [Trichoplax adhaerens]
gi|190578158|gb|EDV18710.1| hypothetical protein TRIADDRAFT_34776 [Trichoplax adhaerens]
Length = 202
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 100/203 (49%), Positives = 144/203 (70%), Gaps = 1/203 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FRLG+ TW+S W+ Y LHED+KIR+ + L AGV+++ +ER
Sbjct: 1 MGQKVNPNSFRLGIVSTWDSSWYC-TKNYAKKLHEDIKIRKLIFDKLNYAGVSRVCVERP 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +YS+RPG++IGKKG DI KI++ +S +T +E+ +++ EV K E + L+A+++
Sbjct: 60 ANKIIINIYSSRPGVVIGKKGADIAKIKEFISKITLNEVVINITEVRKAETDPLLVAKAV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE++V FR+A+KRA+ +AM+ GA G+K+ SGRL GAE++RTE Y EGRVPL TLRA
Sbjct: 120 AEQLEKKVSFRKAVKRAISNAMKMGAKGIKISVSGRLGGAEIARTEWYKEGRVPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVS 203
+ Y A A T YG G+KV+V
Sbjct: 180 IVKYDMAEAHTIYGLIGVKVWVY 202
>gi|32965338|gb|AAP91824.1| ribosomal protein S3 [Primrose virescence phytoplasma]
gi|52547302|gb|AAU81714.1| ribosomal protein S3 [Candidatus Barley phytoplasma]
Length = 244
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKIALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|11465428|ref|NP_045181.1| ribosomal protein S3 [Cyanidium caldarium]
gi|27734488|sp|Q9TLT8|RR3_CYACA RecName: Full=30S ribosomal protein S3, chloroplastic
gi|6466331|gb|AAF12913.1|AF022186_35 unknown [Cyanidium caldarium]
Length = 207
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 91/207 (43%), Positives = 144/207 (69%), Gaps = 2/207 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP+ FRLG+N +S WFAR Y A+L ED KIR+Y+ +L +A +++I I R
Sbjct: 1 MGQKINPLSFRLGINKLHHSSWFARPQSYTAILQEDKKIRDYIFTNLLRASISRIQINRQ 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE--IHLSVNEVPKPEINATLIAQ 118
+ ++++RPG+IIG+ GT I+ +++ + N+ + + + +++ +V P+I+A L+A
Sbjct: 61 FNQVELQLHTSRPGVIIGRSGTGIDSLKRNVKNLLSKQSQLKINIIDVTNPDIDAVLLAC 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
I+QQLE R F+RA+++A+Q A + G+K+ SGRLNGAE++RTE EGRVPLQTL
Sbjct: 121 FISQQLESRTTFKRAVRQAIQRAQKSDIPGIKIQVSGRLNGAEIARTEWIREGRVPLQTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLR 205
+A +DY T+ A T++G G+KV++
Sbjct: 181 KADLDYATSSAYTSFGVVGVKVWIFKG 207
>gi|28261755|ref|NP_783269.1| ribosomal protein S3 [Atropa belladonna]
gi|27734482|sp|Q8S8V5|RR3_ATRBE RecName: Full=30S ribosomal protein S3, chloroplastic
gi|20068369|emb|CAC88082.1| ribosomal protein S3 [Atropa belladonna]
Length = 218
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 79/218 (36%), Positives = 132/218 (60%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG +S WF++ Y L ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFSQPKNYSEGLQEDQKIRDCIKNYVQKNMRTSSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I++ P L+I + IE+++ +K N N +++++V + KP
Sbjct: 61 ARIEIQKRIDLIQVIIFMGFPKLLIESRPRGIEELQMTLQKELNCVNRKLNIAVTRIAKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
N ++A+ IA QL+ RV FR+AMK+A++ + G+++ +GR++G E++R E
Sbjct: 121 YGNPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY T YG GIK+++ L +E
Sbjct: 181 EGRVPLQTIRAKIDYCAYTVRTIYGVLGIKIWIFLDEE 218
>gi|126680553|gb|ABO26494.1| ribosomal protein S3 [Mexican periwinkle virescence phytoplasma]
Length = 251
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 95/215 (44%), Positives = 138/215 (64%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQKINP RLG+ TW+S+WF + E AL+ ED IRE ++ K++ +++I I+R
Sbjct: 1 MGQKINPNGLRLGIIRTWDSQWFVQDKEIPALIKEDYLIRELIKNFSKKSAISQIEIQRL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
T +I +++A+PG+IIG+ G K+ KL +T ++ L++ EV E A LI
Sbjct: 61 KEKTKNRIKIHIHTAKPGVIIGRDGETRNKMVAKLKELTQKDVDLNILEVKNFEKIALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA+QLE R+ FRR K A+Q A++ G G+K + SGRLNGAE++R+E EGRVPL
Sbjct: 121 AQNIAEQLENRMNFRRVQKMAIQKALKAGVKGIKTLVSGRLNGAEIARSEGNAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY + A T YG G+KV++ + +
Sbjct: 181 TLRADIDYASLQAHTTYGVLGVKVWIFHGEVLPGQ 215
>gi|37039552|gb|AAQ88141.1| ribosomal protein S3 [Candidatus Phytoplasma australiense]
Length = 239
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 135/215 (62%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW+S+W E AL+ ED IR+ + + K+ +++I I+R
Sbjct: 1 MGQKTNPNGLRLGIIRTWDSQWCVNDKEIPALIKEDFLIRQLINNYSKRNSISQIEIQRL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
T I +++A+PG+I GK G KI+ +L +T +I+L++ EV P+ A L+
Sbjct: 61 KEKTKNRITITIHTAKPGIISGKDGETRNKIQAQLKKLTQKDINLNILEVKNPDKTAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A + GA G+KV+ SGRLNG E++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMKFRRVQKMAIQKAFKAGAKGIKVLISGRLNGDEIARSERHDEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAALEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|75906920|ref|YP_321216.1| 30S ribosomal protein S3 [Anabaena variabilis ATCC 29413]
gi|91207639|sp|Q3MFB5|RS3_ANAVT RecName: Full=30S ribosomal protein S3
gi|75700645|gb|ABA20321.1| SSU ribosomal protein S3P [Anabaena variabilis ATCC 29413]
Length = 260
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 103/225 (45%), Positives = 142/225 (63%), Gaps = 7/225 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL-----KQAGVAKI 55
MGQKI+P+ FRLG+ SRWFA S Y LL ED K+R+Y++ L AG++++
Sbjct: 1 MGQKIHPVGFRLGITQEHQSRWFAEPSRYPELLQEDHKLRQYIEQKLGRLAQNNAGISEV 60
Query: 56 LIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINA 113
IER + V +ARPG+++G+ G IE +R L + N +I ++V EV + + +A
Sbjct: 61 RIERKADQIDLEVRTARPGVVVGRGGQGIEALRTGLQTLLGGNRQIRINVVEVQRVDADA 120
Query: 114 TLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV 173
LIA+ IAQQLERRV FRR +++A+Q A + G G+KV SGRLNGAE++RTE EGRV
Sbjct: 121 YLIAEFIAQQLERRVSFRRVVRQAIQRAQKAGIQGIKVQVSGRLNGAEIARTEWTREGRV 180
Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
PL TLRA IDY A+T YG GIKV+V + + + P
Sbjct: 181 PLHTLRADIDYSYCTAKTVYGILGIKVWVFKGEIIPGQEVAAPPP 225
>gi|239618259|ref|YP_002941581.1| ribosomal protein S3 [Kosmotoga olearia TBF 19.5.1]
gi|259495252|sp|C5CGQ8|RS3_KOSOT RecName: Full=30S ribosomal protein S3
gi|239507090|gb|ACR80577.1| ribosomal protein S3 [Kosmotoga olearia TBF 19.5.1]
Length = 215
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 98/208 (47%), Positives = 141/208 (67%), Gaps = 2/208 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG++ W +RW Y L EDLKIR+Y++ AGV+ I IER
Sbjct: 1 MGQKVHPYGFRLGISKDWKARWI-NEKNYKEYLLEDLKIRDYIKKTYHSAGVSDIFIERP 59
Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
I + ARPG+IIG+KG++++K+R L + N + L++ EV PE +A L+A+
Sbjct: 60 EPGKVSITIKCARPGVIIGRKGSEVKKLRAGLERLINRKFQLNIEEVKTPETDALLVAED 119
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA ++E+R ++RAMKRA+ +AMR GA G+K++ SGRLNGAE++RTE YLEGR+PLQTL+
Sbjct: 120 IASRIEKRASYKRAMKRAIFTAMRKGAKGIKIMVSGRLNGAEIARTEWYLEGRLPLQTLK 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDE 207
+ IDYG A T G G++V++ D
Sbjct: 180 SDIDYGYTTALTKMGIIGVRVWIYKGDV 207
>gi|95116727|gb|ABF56574.1| ribosomal protein S3 [Paulownia witches'-broom phytoplasma]
Length = 237
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 95/215 (44%), Positives = 132/215 (61%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++A+PG+IIGK G K+ KL +T +++L+V EV + NA LI
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKNALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLL 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|159135075|gb|ABW88125.1| ribosomal protein S3 [Carrot phytoplasma sp. ca2006/5]
Length = 237
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVDKLKELTQKDVNLNVLEVKNSDKIALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAALEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|27734479|sp|O98455|RR3_SPIMX RecName: Full=30S ribosomal protein S3, chloroplastic
gi|4007871|gb|AAC95311.1| ribosomal protein S3 [Spirogyra maxima]
Length = 218
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 88/218 (40%), Positives = 133/218 (61%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL--------KQAGV 52
MGQKI+P+ FRLGV S WFAR S Y LL ED KIR ++ ++ G+
Sbjct: 1 MGQKIHPLGFRLGVTQEHLSNWFARPSRYSDLLEEDEKIRNCIKEYVRTHIRNSSNYGGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN--SEIHLSVNEVPKPE 110
+++ I+R ++ +++ P L+I +G + +++ + N + ++ ++++E+ K
Sbjct: 61 SRVKIQRKTDLVQVDIHTGFPALLIEGRGKGLLVLKQSVLNSISTERKLKITLSEIDKYY 120
Query: 111 INATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGA-DGVKVIASGRLNGAELSRTECYL 169
A ++A+ IA QLE RV FRR MK+A+Q AM G G+K+ +GRLNGAE++R E
Sbjct: 121 AEANILAEYIALQLESRVAFRRTMKKAIQLAMEQGKVKGIKIQIAGRLNGAEIARIEWAR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQTLRA IDY A+T YG GIKV++ +E
Sbjct: 181 EGRVPLQTLRACIDYCHYPAQTTYGVLGIKVWIFKGEE 218
>gi|32965342|gb|AAP91827.1| ribosomal protein S3 [Aster yellows phytoplasma]
gi|32965346|gb|AAP91830.1| ribosomal protein S3 [Aster yellows phytoplasma]
Length = 244
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 133/215 (61%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERX 60
Query: 61 HKNCR----IIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
+ + I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKIALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|32965354|gb|AAP91836.1| ribosomal protein S3 [Maize bushy stunt phytoplasma]
Length = 244
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVDKLKELTQKDVNLNVLEVKNSDKIALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAALEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|28202211|ref|NP_777452.1| ribosomal protein S3 [Anthoceros formosae]
gi|34924918|sp|Q85CS9|RR3_ANTFO RecName: Full=30S ribosomal protein S3, chloroplastic
gi|27807913|dbj|BAC55388.1| ribosomal protein S3 [Anthoceros formosae]
gi|27808066|dbj|BAC55485.1| ribosomal protein S3 [Anthoceros formosae]
Length = 218
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 87/218 (39%), Positives = 132/218 (60%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLK--------IREYLQCHLKQAGV 52
MGQKINP+ FRLGV S WFA+ + Y LL ED K +R++++ G+
Sbjct: 1 MGQKINPLGFRLGVTQNHCSHWFAKPNNYYKLLEEDEKMRNCIYNYVRKHIKSSSNYGGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLS---NMTNSEIHLSVNEVPKP 109
A+I IER +I +Y+ P L++ +G IE+++ + N+ N ++ +++ EV +P
Sbjct: 61 ARIEIERKTDLIQIEIYTGFPALLVESRGRGIEELKADVQTVLNLGNRKLRMALTEVEEP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
++A+ IA QLE RV FRR MK+A++ + G+K+ +GRLNGAE++R E
Sbjct: 121 YTEPNILAEYIALQLENRVAFRRTMKKAIELTRKTSVKGIKIQIAGRLNGAEIARVEWAR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA I+Y A+T YG GIKV++ +E
Sbjct: 181 EGRVPLQTIRAQINYCYYPAQTIYGVLGIKVWIFQTEE 218
>gi|225712488|gb|ACO12090.1| 30S ribosomal protein S3 [Lepeophtheirus salmonis]
Length = 238
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 108/226 (47%), Positives = 157/226 (69%), Gaps = 2/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ W+S W+ G++YG L ED KIR+Y+ L +A V+K++IERT
Sbjct: 1 MGQKTNPIGNRLGIIRGWDSAWY-GGNDYGDRLAEDNKIRKYISARLARASVSKVIIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I + SARPG+IIGK+G++++K++++L +T+ E+ +++ E+ +PE++A L+A SI
Sbjct: 60 LKLVTITICSARPGIIIGKQGSEVDKLKEELKKLTSKEVQVNIYEIRRPEMDAKLVANSI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E RV FRRA+K A+ +AMR GA+G+K+ A+GRLNGAE++RTE Y EGR PL T RA
Sbjct: 120 ARQIEGRVSFRRAIKMAIAAAMRMGAEGIKIQAAGRLNGAEMARTEMYSEGRTPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDY + A T YG GIKV++ + EV P +K
Sbjct: 180 DIDYALSEALTTYGLIGIKVWIC-KGEVYGKRDLTPMETTAKQKKG 224
>gi|32965386|gb|AAP91860.1| ribosomal protein S3 [Apricot aster yellows phytoplasma]
Length = 244
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 132/215 (61%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+WF E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWFVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++A+PG+IIGK G K+ K+ +T +++L+V EV + A LI
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKIKELTQKDVNLNVLEVKNSDKIALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRIQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEALPGQ 215
>gi|298373704|ref|ZP_06983693.1| ribosomal protein S3 [Bacteroidetes oral taxon 274 str. F0058]
gi|298274756|gb|EFI16308.1| ribosomal protein S3 [Bacteroidetes oral taxon 274 str. F0058]
Length = 255
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 95/225 (42%), Positives = 147/225 (65%), Gaps = 2/225 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ W+S W+ G +G L ED KIR+YL L +A V++I+IERT
Sbjct: 1 MGQKTNPISNRLGIIRGWDSNWYGGG-NFGDTLVEDSKIRKYLNIRLAKAMVSRIVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I V +ARPG I+G+ G D+EK+++++ +T+ +I +++ EV P+++A ++A +
Sbjct: 60 LKLVTITVCAARPGFIVGRGGEDVEKLKEEIKKITDKDIEINIFEVKNPDLDAQIVANDV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+++E ++ +R+A++ A+ + M+ GA+G+KV SGRLNGAE++R+E Y EGR PL T RA
Sbjct: 120 ARKIEGKIAYRKAVRSAIFNTMKNGAEGIKVQVSGRLNGAEIARSEMYKEGRTPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
IDY A A T G G+KV++ EV P E ++
Sbjct: 180 DIDYCHAEALTKVGLIGVKVWICRG-EVYGKKDLEPKFESERDKR 223
>gi|89280673|ref|YP_514890.1| ribosomal protein S3 [Solanum lycopersicum]
gi|91207770|sp|Q2MI62|RR3_SOLLC RecName: Full=30S ribosomal protein S3, chloroplastic
gi|84372021|gb|ABC56338.1| ribosomal protein S3 [Solanum lycopersicum]
gi|89241709|emb|CAJ32432.1| ribosomal protein S3 [Solanum lycopersicum]
Length = 218
Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 79/218 (36%), Positives = 134/218 (61%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + +S WF++ Y L ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFSQPKNYSEGLQEDKKIRDCIKNYVQKNMRTSSGIEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I++ P L+I + IE+++ +K N N +++++V + KP
Sbjct: 61 ARIEIQKRIDLIQVIIFMGFPKLLIESRPRGIEELQMTLQKEFNCVNRKLNIAVTRIAKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
N ++A+ IA QL+ RV FR+AMK+A++ + G+++ +GR++G E++R E
Sbjct: 121 YGNPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY + T YG GIK+++ L +E
Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGILGIKIWIFLDEE 218
>gi|126680548|gb|ABO26491.1| ribosomal protein S3 [American potato purple top wilt phytoplasma]
Length = 251
Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 95/215 (44%), Positives = 136/215 (63%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW+S+WFA E L+ ED IR+ + K++ +++I I+R
Sbjct: 1 MGQKTNPNGLRLGIIRTWDSQWFANDKEIPVLIKEDFLIRQLINNFSKKSSISQIEIQRL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
T I +++A+PG IIGK G + KI ++L +T I+L++ EV E + L+
Sbjct: 61 KEKTKNCITISIHTAKPGFIIGKDGENRNKIVEQLKKLTKKNINLNILEVKNSEKTSLLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQS+A+QLE R+ FRR K A+Q A++ GA G+KV+ SGRLNG E++R+E + EGRVPL
Sbjct: 121 AQSMAEQLENRMKFRRVQKLAIQKALKSGAKGIKVLISGRLNGDEIARSEGHSEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAALEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|229496214|ref|ZP_04389934.1| ribosomal protein S3 [Porphyromonas endodontalis ATCC 35406]
gi|229316792|gb|EEN82705.1| ribosomal protein S3 [Porphyromonas endodontalis ATCC 35406]
Length = 245
Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 101/226 (44%), Positives = 147/226 (65%), Gaps = 2/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RLG W+S W+ G YG L ED +IR+YL +AG+++I+IER
Sbjct: 1 MGQKINPISNRLGYIRGWDSNWY-GGKNYGPTLLEDSRIRKYLNARHAKAGISRIVIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ + +ARPGLIIGK G +++K++++L +T E+ + + E+ +PE++++L+A SI
Sbjct: 60 LHLVTVTICTARPGLIIGKGGQEVDKLKEELKKLTKKEVQIYIYEIRRPELDSSLVASSI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE V +RRA+K A+ SAMR GA+G+KV SGRLNGAE++R+E + EGR PL TLRA
Sbjct: 120 ARQLEGNVAYRRAVKMAIASAMRSGAEGIKVHLSGRLNGAEMARSEMFKEGRTPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
IDY A T G G+KV++ + EV + P +
Sbjct: 180 DIDYAHEEALTKVGMIGVKVWIM-KGEVYEKRDLAPNFQQASQNNQ 224
>gi|218282165|ref|ZP_03488464.1| hypothetical protein EUBIFOR_01046 [Eubacterium biforme DSM 3989]
gi|218216844|gb|EEC90382.1| hypothetical protein EUBIFOR_01046 [Eubacterium biforme DSM 3989]
Length = 270
Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 95/240 (39%), Positives = 142/240 (59%), Gaps = 14/240 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ----------- 49
MGQK++PI R+GV W SRW+A E+G LL ED+KIRE ++ + +
Sbjct: 1 MGQKVSPIGMRVGVIRDWQSRWYADDKEFGTLLMEDVKIRELVEAYYAKLSNEAVDKRKA 60
Query: 50 -AGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVP 107
+++I IERT +I+ +A PG++IG+ G IE ++KK++ + + + ++V EV
Sbjct: 61 DPQISRIEIERTKGRMTVIIRTAHPGVVIGQDGKSIEGLKKKVAKIASAKNVQINVVEVA 120
Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTEC 167
P ++A L+A+ IA +LE R FR K+A+Q+ MR GA G+K SGRL GA+++RTE
Sbjct: 121 NPNLDARLVARWIANELEGRKSFRATQKKAIQNTMRAGAKGIKTAVSGRLGGADMARTEG 180
Query: 168 YLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH-RVVEKD 226
Y EG VPL TLR+ IDY A T YG G+KV++ + + P A R + K
Sbjct: 181 YSEGVVPLHTLRSDIDYAWEEAATQYGRLGVKVWICRGEVLPGEMVKEPEAPKQRPMRKG 240
>gi|32965378|gb|AAP91854.1| ribosomal protein S3 [Grey dogwood witches'-broom phytoplasma]
Length = 244
Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKIALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRIQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|290574709|gb|ADD46948.1| ribosomal protein S3 [Paulownia witches'-broom phytoplasma]
Length = 252
Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++A+PG+IIGK G K+ KL +T +++L+V EV + NA LI
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKNALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA VK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKEVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|91209026|ref|YP_538888.1| ribosomal protein S3 [Solanum bulbocastanum]
gi|108773167|ref|YP_635677.1| ribosomal protein S3 [Solanum tuberosum]
gi|91207775|sp|Q2MIE9|RR3_SOLBU RecName: Full=30S ribosomal protein S3, chloroplastic
gi|91207776|sp|Q2VEE2|RR3_SOLTU RecName: Full=30S ribosomal protein S3, chloroplastic
gi|82754662|gb|ABB90076.1| ribosomal protein S3 [Solanum tuberosum]
gi|84371933|gb|ABC56251.1| ribosomal protein S3 [Solanum bulbocastanum]
gi|88656841|gb|ABD47094.1| ribosomal protein S3 [Solanum tuberosum]
Length = 218
Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 79/218 (36%), Positives = 133/218 (61%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG +S WF++ Y L ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFSQPKNYSEGLQEDKKIRDCIKNYVQKNMRTSSGIEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I++ P L+I + IE+++ +K N N +++++V + KP
Sbjct: 61 ARIEIQKRIDLIQVIIFMGFPKLLIESRPRGIEELQMTLQKEFNCVNRKLNIAVTRIAKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
N ++A+ IA QL+ RV FR+AMK+A++ + G+++ +GR++G E++R E
Sbjct: 121 YGNPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY + T YG GIK+++ L +E
Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGILGIKIWIFLDEE 218
>gi|331271809|gb|AED02510.1| ribosomal protein S3 [Azalea little leaf phytoplasma]
Length = 252
Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 95/215 (44%), Positives = 132/215 (61%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+W E L+ EDL IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDLLIRKLINNFTKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKIALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|147669102|ref|YP_001213920.1| 30S ribosomal protein S3 [Dehalococcoides sp. BAV1]
gi|189044974|sp|A5FRY1|RS3_DEHSB RecName: Full=30S ribosomal protein S3
gi|146270050|gb|ABQ17042.1| SSU ribosomal protein S3P [Dehalococcoides sp. BAV1]
Length = 278
Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 90/218 (41%), Positives = 143/218 (65%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG+K++PI FRLG+ W+++W A + L EDLK+R+ + A ++++ IER
Sbjct: 1 MGRKVHPIGFRLGIIKDWSAKWHASDKNFAECLTEDLKLRKAISKKYVDAAISQVDIERQ 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ V +ARPG++IG+ G ++++R L ++ ++ L++ E+ + E++A L+A+S+
Sbjct: 61 SNKVTVSVRTARPGIVIGRGGQRVDEMRHFLEDLIGKKVQLNIVEISQAELDAFLVARSV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+ERRV +RRAMK+A+ +M+ GA G+K+ ASGRL G E++R E EGRVPL TLRA
Sbjct: 121 AEQIERRVAYRRAMKQAIFRSMQAGAKGIKICASGRLGGVEIARREVMHEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
IDYG A TA G GIKV+V D + ++ +A
Sbjct: 181 DIDYGCTRAHTALGDVGIKVWVYRGDILPEAKEKSESA 218
>gi|300088191|ref|YP_003758713.1| 30S ribosomal protein S3 [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527924|gb|ADJ26392.1| ribosomal protein S3 [Dehalogenimonas lykanthroporepellens BL-DC-9]
Length = 283
Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 86/217 (39%), Positives = 141/217 (64%), Gaps = 1/217 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG+K++P FR+G WNS+WFA ++ L EDLKIR+ ++ AG++ I IER
Sbjct: 1 MGRKVHPYAFRIGAIKGWNSKWFAE-KDFSTNLLEDLKIRKAIKKKYADAGISNIEIERQ 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ V ++RPG++IG+ G ++++R+ L ++ +I L+++E+ + E++A L+A+S+
Sbjct: 60 AAKITVTVSTSRPGIVIGRGGQRVDEMRRYLEEVSGKKIQLNIHEIGQAELDAYLVARSV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A Q+ERR+ +RRAMK+A+ + GA G+K+ +GRL G E++R E GRVPL T+RA
Sbjct: 120 ADQMERRIAYRRAMKQAMFRTRQAGAQGIKIKCAGRLGGVEIARQEEMHNGRVPLHTIRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
IDYG A A T G G+KV+V D + ++ + +
Sbjct: 180 DIDYGFAEAHTPLGRIGVKVWVYRGDILPEAKAVVEQ 216
>gi|220906725|ref|YP_002482036.1| 30S ribosomal protein S3 [Cyanothece sp. PCC 7425]
gi|219863336|gb|ACL43675.1| ribosomal protein S3 [Cyanothece sp. PCC 7425]
Length = 252
Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 101/232 (43%), Positives = 137/232 (59%), Gaps = 10/232 (4%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL---------QCHLKQAG 51
MGQKI+P FRLGV SRWFA Y LL ED KIR+++ L AG
Sbjct: 1 MGQKIHPTGFRLGVTQEHRSRWFADPERYPELLQEDHKIRKFIATPHKFKDGNLDLTSAG 60
Query: 52 VAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK-IRKKLSNMTNSEIHLSVNEVPKPE 110
+A++ IER + V +ARPG+++G+ G+ IE + ++ I ++V EV + +
Sbjct: 61 IAEVRIERKADQIDLEVRTARPGVVVGRGGSGIELLRTRLQQHLGGRSIRVNVVEVQRVD 120
Query: 111 INATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLE 170
A LIA+ IAQQLERRV FRR +++A+Q A R G +G+K+ SGRLNGAE++RTE E
Sbjct: 121 AEAGLIAEYIAQQLERRVSFRRVVRQAIQRAQRAGIEGIKIQVSGRLNGAEIARTEWTRE 180
Query: 171 GRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
GRVPL TLRA IDY A T YG GIKV+V + + + E +
Sbjct: 181 GRVPLHTLRADIDYAYRTARTVYGILGIKVWVFKGEVIPGQEEPPSNREAQP 232
>gi|121534641|ref|ZP_01666462.1| ribosomal protein S3 [Thermosinus carboxydivorans Nor1]
gi|121306661|gb|EAX47582.1| ribosomal protein S3 [Thermosinus carboxydivorans Nor1]
Length = 215
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 90/197 (45%), Positives = 137/197 (69%), Gaps = 1/197 (0%)
Query: 23 FARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT 82
+A +Y LLHED+KIR++++ L AGV++I IER + +++A+PG++IG+ G
Sbjct: 16 YAD-KDYAKLLHEDIKIRDFIKEKLYTAGVSRIEIERAANRVKATIHTAKPGMVIGRGGA 74
Query: 83 DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAM 142
IE+++++L + I +++ E+ +PE++ATL+A++IA QLERR+ FRRAMK+AV M
Sbjct: 75 GIEELKQELRKLVGRNIDINIAEIKQPELDATLVAENIAAQLERRIAFRRAMKQAVTRTM 134
Query: 143 RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202
R GA G+KV+ SGRL GAE++RTE Y EG +PL TLRA IDYGTA A T YG G+KV++
Sbjct: 135 RMGAKGIKVMVSGRLGGAEIARTEQYREGSIPLHTLRADIDYGTAEAHTTYGRIGVKVWI 194
Query: 203 SLRDEVSDSDSTIPAAE 219
+ + ++ E
Sbjct: 195 YKGEVLPEAKKPAAVTE 211
>gi|108794922|gb|ABG20965.1| ribosomal protein S3 [Chinaberry witches'-broom phytoplasma]
Length = 252
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISRIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKIALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|161897986|gb|ABX80102.1| ribosomal protein S3 [Lilium sp. phytoplasma NECu1]
Length = 216
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 95/215 (44%), Positives = 132/215 (61%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQKINP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKINPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVDKLKELTQKDVNLNVLEVKNSDKIALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAALEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|306486203|gb|ADM92743.1| ribosomal protein S3 [Davidia involucrata]
Length = 218
Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats.
Identities = 80/218 (36%), Positives = 134/218 (61%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG+ +S WFA+ Y L ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGITQGHHSLWFAQPKNYSEGLQEDQKIRDSIKNYVQKNMRISSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I+Y P L+I + IE+++ +K N N ++++++ + KP
Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKLLIESRPRGIEELQMNLQKEFNCVNRKLNIAITRIAKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
N+ ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E
Sbjct: 121 YGNSNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY T YG GIK+++ + +E
Sbjct: 181 EGRVPLQTIRAKIDYCCYTVRTIYGVLGIKIWIFIDEE 218
>gi|161897989|gb|ABX80104.1| ribosomal protein S3 [Lilium sp. phytoplasma Lix]
Length = 215
Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats.
Identities = 95/215 (44%), Positives = 132/215 (61%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQKINP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKINPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVDKLKELTQKDVNLNVLEVKNSDKIALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAALEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|7388189|sp|O66098|RS3_PHYS2 RecName: Full=30S ribosomal protein S3
gi|3047158|gb|AAC13665.1| ribosomal protein S3 [Phytoplasma sp. STRAWB2]
Length = 252
Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats.
Identities = 95/215 (44%), Positives = 132/215 (61%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+W+ E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWYVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++A+PG+IIGK G K+ KL +T E++L+V EV + A LI
Sbjct: 61 KEKNKNRITIFVHTAKPGVIIGKDGDTRNKLVVKLKELTQKEVNLNVLEVKNSDKIALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|290487090|gb|ADD29929.1| ribosomal protein S3 [Ehretia acuminata]
Length = 218
Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats.
Identities = 78/218 (35%), Positives = 133/218 (61%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG +S WFA+ Y L ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFAQPKNYSEGLQEDQKIRDCIKNYVQKNMRISSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I++ P L+I + IE+++ +K N + ++++++ + KP
Sbjct: 61 ARIEIQKRIDLIQVIIFMGFPKLLIESRPRGIEELQTNLQKEFNCVSRKLNIAITRIAKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
N ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E
Sbjct: 121 YGNPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY + T YG GIK+++ + +E
Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDEE 218
>gi|32965374|gb|AAP91851.1| ribosomal protein S3 [Blueberry stunt phytoplasma]
Length = 244
Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 132/215 (61%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+W E L+ ED IR+ + +K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFVKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI
Sbjct: 61 KEKNKNRITISVHAAKPGVIIGKDGDTRNKLVVKLKELTKKDVNLNVLEVKNSDKIALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|62263397|gb|AAX78158.1| unknown protein [synthetic construct]
Length = 224
Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats.
Identities = 98/190 (51%), Positives = 139/190 (73%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP RLG W S W+A S Y L+ED+K+RE+L L A V+KI IER
Sbjct: 27 MGQKVNPNGIRLGYIRDWRSTWYADSSRYATKLNEDIKVREFLHKKLAAAAVSKIQIERP 86
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+N +I +++AR G++IGKKG D+EK+R ++ + + +++ EV KPEI+A L+A+S+
Sbjct: 87 AQNAKITIHTARSGIVIGKKGEDVEKLRAEVHKLMGIPVQINIEEVRKPEIDAKLVAESV 146
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+RV+FRRAMK+A+Q+AM+ GA G+K++ SGRL GAE++R+E +GRVPLQT RA
Sbjct: 147 AQQLEKRVMFRRAMKKAMQAAMKSGAKGIKIMVSGRLGGAEIARSEWARDGRVPLQTFRA 206
Query: 181 HIDYGTAVAE 190
+DY TA A
Sbjct: 207 DVDYATAEAY 216
>gi|193211857|ref|YP_001997810.1| 30S ribosomal protein S3 [Chlorobaculum parvum NCIB 8327]
gi|226697679|sp|B3QR86|RS3_CHLP8 RecName: Full=30S ribosomal protein S3
gi|193085334|gb|ACF10610.1| ribosomal protein S3 [Chlorobaculum parvum NCIB 8327]
Length = 254
Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats.
Identities = 100/210 (47%), Positives = 146/210 (69%), Gaps = 2/210 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ--AGVAKILIE 58
MGQK+NP FRLG+ W SRW+ G + +D IR Y+ LK+ AGV+K++IE
Sbjct: 1 MGQKVNPTGFRLGIIKDWTSRWYDDGPVIAEKIKQDQVIRNYISARLKKEKAGVSKVVIE 60
Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118
RT K+ +I +Y+ARPG ++G+KG +I + ++L+ +T E+ + V EV KPEI A LI +
Sbjct: 61 RTTKHIKINIYAARPGAVVGRKGEEINNLSQELTRITGREVKIDVIEVIKPEIEAQLIGE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
+IA QLE RV FRRAMK+A+Q AMR GA+G+++ +GRL G E++R+E Y EG++PL TL
Sbjct: 121 NIAYQLENRVSFRRAMKQAIQQAMRAGAEGIRIRCAGRLGGVEIARSEQYKEGKIPLHTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208
RA++DY + A T G+ GIKV+V + +
Sbjct: 181 RANVDYASVTAHTIAGAIGIKVWVYKGEVL 210
>gi|202070824|gb|ACH95368.1| ribosomal protein S3 [Mulberry dwarf phytoplasma]
gi|226903427|gb|ACO90361.1| ribosomal protein S3 [Amaranth virescence phytoplasma]
gi|229577480|gb|ACQ82715.1| ribosomal protein S3 [Mulberry dwarf phytoplasma]
gi|229577487|gb|ACQ82719.1| ribosomal protein S3 [Mulberry dwarf phytoplasma]
Length = 252
Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 130/215 (60%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++ +PG+IIGK G K+ KL +T +++L+V EV + A LI
Sbjct: 61 KEKNKNRITISVHTDKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKIALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|290574717|gb|ADD46953.1| ribosomal protein S3 [Periwinkle leaf yellowing phytoplasma]
Length = 252
Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++A+PG+IIGK G K+ KL +T +++L++ EV + A LI
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNLLEVKNSDKIALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|11467339|ref|NP_043196.1| ribosomal protein S3 [Cyanophora paradoxa]
gi|133926|sp|P23401|RR3_CYAPA RecName: Full=Cyanelle 30S ribosomal protein S3
gi|336647|gb|AAA63621.1| ribosomal protein s3 [Cyanophora paradoxa]
gi|1016140|gb|AAA81227.1| ribosomal protein S3 [Cyanophora paradoxa]
Length = 219
Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats.
Identities = 97/217 (44%), Positives = 141/217 (64%), Gaps = 2/217 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+PI FRLG+ S WFA +Y LL ED IR+Y++ +L AG+A+I I+R
Sbjct: 1 MGQKIHPIGFRLGITQKHRSCWFANPKQYPTLLQEDHLIRQYIEKNLSNAGIAQIYIQRK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN--SEIHLSVNEVPKPEINATLIAQ 118
+ + +ARPG+++G+ G IE +RK L ++ +I ++V EV + + A LI +
Sbjct: 61 ADRIELELRTARPGVVVGRGGRGIEVLRKGLKDLLGEQKQIRINVIEVKQIDAEAALIGE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
I QQLERRV FRR +++A+ A R G +G+K+ SGRLNGAE++R+E EGRVPLQTL
Sbjct: 121 FITQQLERRVAFRRIVRKAITRAQRRGIEGIKIQISGRLNGAEIARSEWSREGRVPLQTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
RA IDY A+T YG G+KV++ + + + + I
Sbjct: 181 RAEIDYSYKRAQTIYGVLGVKVWIFKGEVIPGNPTEI 217
>gi|57234672|ref|YP_181224.1| 30S ribosomal protein S3 [Dehalococcoides ethenogenes 195]
gi|91207651|sp|Q3Z975|RS3_DEHE1 RecName: Full=30S ribosomal protein S3
gi|57225120|gb|AAW40177.1| ribosomal protein S3 [Dehalococcoides ethenogenes 195]
Length = 278
Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats.
Identities = 91/221 (41%), Positives = 142/221 (64%), Gaps = 1/221 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG+K++PI FRLG+ W+++W A + L EDLK+R+ + A ++++ IER
Sbjct: 1 MGRKVHPIGFRLGIIKDWSAKWHASDKGFAECLTEDLKLRKAIAKKYVDAAISQVDIERQ 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ V +ARPG++IG+ G ++++R L + ++ L++ E+ + E++A L+A+S+
Sbjct: 61 SNKVTVSVRTARPGIVIGRGGQRVDEMRHFLEELIGKKVQLNIVEISQAELDAFLVARSV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+ERRV +RRAMK+A+ +M+ GA G+KV ASGRL G E++R E EGRVPL TLRA
Sbjct: 121 AEQIERRVAYRRAMKQAIFRSMQAGAKGIKVCASGRLGGVEIARREVMHEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD-SDSTIPAAEH 220
IDYG A TA G GIKV+V D + + + + P
Sbjct: 181 DIDYGCTRAHTALGDIGIKVWVYRGDILPEAKEQSEPEVTE 221
>gi|39938692|ref|NP_950458.1| 30S ribosomal protein S3 [Onion yellows phytoplasma OY-M]
gi|7388193|sp|Q50267|RS3_ASTYP RecName: Full=30S ribosomal protein S3
gi|61215600|sp|Q6YR15|RS3_ONYPE RecName: Full=30S ribosomal protein S3
gi|285401|pir||B41839 ribosomal protein S3 - Oenothera mycoplasma-like organism
gi|149869|gb|AAA25330.1| rps3 [Phytoplasma sp.]
gi|37731403|gb|AAO74983.1| ribosomal protein S3 [Aster yellows phytoplasma]
gi|37731407|gb|AAO74986.1| ribosomal protein S3 [Aster yellows phytoplasma]
gi|37731425|gb|AAO74989.1| ribosomal protein S3 [Aster yellows phytoplasma]
gi|37731429|gb|AAO74992.1| ribosomal protein S3 [Aster yellows phytoplasma]
gi|37731433|gb|AAO74995.1| ribosomal protein S3 [Aster yellows phytoplasma]
gi|37731437|gb|AAO74998.1| ribosomal protein S3 [Aster yellows phytoplasma]
gi|37731441|gb|AAO75001.1| ribosomal protein S3 [Aster yellows phytoplasma]
gi|37731777|gb|AAO75004.1| ribosomal protein S3 [Aster yellows phytoplasma]
gi|37731809|gb|AAO75010.1| ribosomal protein S3 [Aster yellows phytoplasma]
gi|39721801|dbj|BAD04291.1| ribosomal protein S3 [Onion yellows phytoplasma OY-M]
gi|89258039|gb|ABD65271.1| ribosomal protein S3 [Aster yellows phytoplasma]
gi|164506987|gb|ABY59730.1| ribosomal protein S3 [Chinaberry witches'-broom phytoplasma]
gi|224551880|gb|ACN54335.1| ribosomal protein S3 [Goldenrain phytoplasma]
gi|297787443|gb|ADI52864.1| ribosomal protein S3 [Onion proliferation phytoplasma]
gi|326368573|gb|ADZ55419.1| ribosomal protein S3 [Periwinkle phyllody phytoplasma]
Length = 252
Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKIALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|37731399|gb|AAO74980.1| ribosomal protein S3 [Aster yellows phytoplasma]
Length = 252
Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKIALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|323149121|ref|YP_004222685.1| ribosomal protein S3 [Anthriscus cerefolium]
gi|289645614|gb|ADD13677.1| ribosomal protein S3 [Anthriscus cerefolium]
Length = 218
Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats.
Identities = 79/218 (36%), Positives = 131/218 (60%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + +S WF + Y L ED KIR ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFTQPKNYSEGLQEDQKIRYFINNYVQKNMKISSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I+Y P L+I + IE+++ +K N N ++++++ + KP
Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKLLIENRPGGIEELQMNLQKEFNCVNRKLNITITRIAKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ ++A+ IA QL+ RV FR+AMK+A++ + G++V SGR++G E++R E
Sbjct: 121 YGSPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQISGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY + T YG GIK+++ + E
Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGE 218
>gi|52220848|ref|YP_087004.1| ribosomal protein S3 [Panax ginseng]
gi|68052925|sp|Q68RW8|RR3_PANGI RecName: Full=30S ribosomal protein S3, chloroplastic
gi|51235351|gb|AAT98547.1| ribosomal protein S3 [Panax ginseng]
Length = 219
Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats.
Identities = 78/218 (35%), Positives = 132/218 (60%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG +S WFA+ Y L ED KIR++++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFAQPKNYSEGLQEDQKIRDFIKNYVQKNMKISSSVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I+Y P L+I + IE+++ +K N ++++++ + KP
Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKLLIESRPRGIEELQMNLQKEFKSVNQKLNIAITRIAKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E
Sbjct: 121 YGSPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY + T YG GIK+++ + E
Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGE 218
>gi|37731817|gb|AAO75013.1| ribosomal protein S3 [Aster yellows phytoplasma]
Length = 252
Score = 228 bits (581), Expect = 6e-58, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKIALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMSFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|81301607|ref|YP_398903.1| ribosomal protein S3 [Nicotiana tomentosiformis]
gi|91207772|sp|Q33BZ3|RR3_NICTO RecName: Full=30S ribosomal protein S3, chloroplastic
gi|80750966|dbj|BAE48042.1| ribosomal protein S3 [Nicotiana tomentosiformis]
Length = 218
Score = 228 bits (581), Expect = 6e-58, Method: Composition-based stats.
Identities = 79/218 (36%), Positives = 132/218 (60%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG +S WF++ Y L ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFSQPKNYSEGLQEDQKIRDCIKNYVQKNMRTSSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I++ P L+I + IE+++ +K N N +++++V + KP
Sbjct: 61 ARIEIKKRIDLIQVIIFMGFPKLLIESRPRGIEELQTTLQKEFNCVNRKLNIAVTRIAKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
N ++A+ IA QL+ RV FR+AMK+A++ + G+++ +GR++G E++R E
Sbjct: 121 YGNPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY + T YG GIK+++ L E
Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFLDQE 218
>gi|225542944|emb|CAX63055.1| rps3 protein [Toona witches'-broom phytoplasma]
Length = 252
Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKIALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEFLPGQ 215
>gi|270307848|ref|YP_003329906.1| ribosomal protein S3 [Dehalococcoides sp. VS]
gi|270153740|gb|ACZ61578.1| ribosomal protein S3 [Dehalococcoides sp. VS]
Length = 278
Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats.
Identities = 90/218 (41%), Positives = 141/218 (64%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG+K++PI FRLG+ W+++W A + L EDLK+R+ + A ++++ IER
Sbjct: 1 MGRKVHPIGFRLGIIKDWSAKWHASDKGFAECLTEDLKLRKAIAKKYVDAAISQVDIERQ 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ V +ARPG++IG+ G ++++R L + ++ L++ E+ + E++A L+A+S+
Sbjct: 61 SNKVTVSVRTARPGIVIGRGGQRVDEMRHFLEELIGKKVQLNIVEISQAELDAFLVARSV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+ERRV +RRAMK+A+ +M+ GA G+KV ASGRL G E++R E EGRVPL TLRA
Sbjct: 121 AEQIERRVAYRRAMKQAIFRSMQAGAKGIKVCASGRLGGVEIARREVMHEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
IDYG A TA G GIKV+V D + ++ +
Sbjct: 181 DIDYGCTRAHTALGDIGIKVWVYRGDILPEAKEKSESE 218
>gi|37731801|gb|AAO75007.1| ribosomal protein S3 [Aster yellows phytoplasma]
Length = 252
Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 130/215 (60%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++ +PG+IIGK G K+ KL +T +++L+V EV + A LI
Sbjct: 61 KEKNKNRITISVHTVKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKIALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|283795005|ref|YP_003359396.1| ribosomal protein S3 [Olea europaea]
gi|281428724|gb|ADA69963.1| ribosomal protein S3 [Olea europaea]
gi|291059291|gb|ADD72127.1| ribosomal protein S3 [Olea europaea]
Length = 218
Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats.
Identities = 78/218 (35%), Positives = 131/218 (60%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG +S WFA+ Y L ED KIR++++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFAQPKNYSEGLQEDQKIRDFIKNYIQKNMRISSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK---IRKKLSNMTNSEIHLSVNEVPKP 109
A I I++ ++I++ P L+I + I++ +K N N ++++++ + KP
Sbjct: 61 AHIEIQKRIDLIQVIIFMGFPKLLIENRPRGIQELQIHLEKEFNYVNQKLNVAITRIAKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
N ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E
Sbjct: 121 YGNPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY + T YG GIK+++ + +E
Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDEE 218
>gi|73748322|ref|YP_307561.1| 30S ribosomal protein S3 [Dehalococcoides sp. CBDB1]
gi|289432370|ref|YP_003462243.1| ribosomal protein S3 [Dehalococcoides sp. GT]
gi|91207652|sp|Q3ZZL8|RS3_DEHSC RecName: Full=30S ribosomal protein S3
gi|73660038|emb|CAI82645.1| ribosomal protein S3 [Dehalococcoides sp. CBDB1]
gi|288946090|gb|ADC73787.1| ribosomal protein S3 [Dehalococcoides sp. GT]
Length = 278
Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats.
Identities = 89/218 (40%), Positives = 142/218 (65%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG+K++PI FRLG+ W+++W A + L EDLK+R+ + A ++++ IER
Sbjct: 1 MGRKVHPIGFRLGIIKDWSAKWHASDKNFAECLTEDLKLRKAISKKYVDAAISQVDIERQ 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ V +ARPG++IG+ G ++++R L ++ ++ L++ E+ + E++A L+A+S+
Sbjct: 61 SNKVTVSVRTARPGIVIGRGGQRVDEMRHFLEDLIGKKVQLNIVEISQAELDAFLVARSV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+ERRV +RRAMK+A+ +M+ GA G+K+ ASGRL G E++R E EGRVPL TLRA
Sbjct: 121 AEQIERRVAYRRAMKQAIFRSMQAGAKGIKICASGRLGGVEIARREVMHEGRVPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
IDYG A TA G GIKV+V D + ++ +
Sbjct: 181 DIDYGCTRAHTALGDVGIKVWVYRGDILPEAKEKSESE 218
>gi|37731301|gb|AAO74977.1| ribosomal protein S3 [Aster yellows phytoplasma]
Length = 252
Score = 227 bits (580), Expect = 7e-58, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 133/215 (61%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERX 60
Query: 61 HKNCR----IIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
+ + I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKIALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|290487092|gb|ADD29930.1| ribosomal protein S3 [Ilex cornuta]
Length = 218
Score = 227 bits (580), Expect = 7e-58, Method: Composition-based stats.
Identities = 79/218 (36%), Positives = 131/218 (60%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG +S WFA Y L ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFAPPKNYSEGLQEDQKIRDCIKNYVQKNSKISSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I+Y P +I + IE+++ +K N N ++++++ + KP
Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKFLIESRPRGIEELQMNLQKEFNGVNRKLNIAITRIAKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
N ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E
Sbjct: 121 YGNPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY + T YG GIK+++ + +E
Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDEE 218
>gi|290487100|gb|ADD29934.1| ribosomal protein S3 [Nerium oleander]
Length = 218
Score = 227 bits (580), Expect = 7e-58, Method: Composition-based stats.
Identities = 75/218 (34%), Positives = 131/218 (60%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG +S WFA+ Y L ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFAQPKNYLEGLQEDQKIRDCIKNYVQKNMKISSALEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
+I I++ ++I++ P ++ + +E+++ +K N N ++++++ + KP
Sbjct: 61 VRIEIQKRIDLIQVIIFMGFPKFLLESRPRGVEELQTTLQKEFNCMNRKLNIAIKRIAKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
N ++A+ +A QL+ RV FR+AMK+A++ + G++V +GR++G E++R E
Sbjct: 121 YGNPNILAEFLAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY + T YG GIK+++ L +E
Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFLDEE 218
>gi|11497565|ref|NP_054973.1| ribosomal protein S3 [Spinacia oleracea]
gi|133938|sp|P09595|RR3_SPIOL RecName: Full=30S ribosomal protein S3, chloroplastic
gi|188036204|pdb|3BBN|C Chain C, Homology Model For The Spinach Chloroplast 30s Subunit
Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome.
gi|12310|emb|CAA31715.1| ribosomal protein S3 [Spinacia oleracea]
gi|7636146|emb|CAB88766.1| ribosomal protein S3 [Spinacia oleracea]
Length = 218
Score = 227 bits (580), Expect = 7e-58, Method: Composition-based stats.
Identities = 75/218 (34%), Positives = 129/218 (59%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + S WF++ Y L ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHYSLWFSQPKNYAEGLQEDQKIRDCIKNYVQKNTKTSSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK---IRKKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I++ P L+I + +E +K N N ++++++ + KP
Sbjct: 61 ARIEIQKRIDLIQVIIHMGFPKLLIENRPQGVEDLKINVQKELNCVNRKLNIAITRIAKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ ++A+ IA QL+ RV FR+AMK+A++ + G+++ +GR++G E++R E
Sbjct: 121 YGDPNILAEFIAGQLKSRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARIEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY T YG GIK+++ + +E
Sbjct: 181 EGRVPLQTIRAKIDYCAYTVRTIYGVLGIKIWIFMGEE 218
>gi|141818|gb|AAA21912.1| 5' end of coding region undetermined [Acholeplasma laidlawii]
Length = 266
Score = 227 bits (580), Expect = 7e-58, Method: Composition-based stats.
Identities = 97/215 (45%), Positives = 137/215 (63%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+ +A + AL+ ED IRE+L + +AGV++I IER
Sbjct: 2 MGQKTNPNGLRLGIIRTWESKRYADQKDVPALIKEDALIREFLNENFSKAGVSQIEIERV 61
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
+ + I +Y ++PG+ +GK+ + K L +T E+ L++ EV +PE A L+
Sbjct: 62 KAKSKERVTIKLYVSKPGIALGKEASVKNKAVSNLEYLTKKEVILNIIEVRRPEKVAVLV 121
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQSIA+QLE R FRRA K A+Q A++ GA G++ + SGRL GAE++R+E Y EGRVPL
Sbjct: 122 AQSIAEQLENRASFRRAQKMAIQRALKSGAKGIRTLVSGRLGGAEMARSEGYSEGRVPLH 181
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA +DY TA A T YG GIKV++ + +
Sbjct: 182 TLRADVDYATAEASTTYGILGIKVWIYHGEVLPGQ 216
>gi|187251816|ref|YP_001876298.1| 30S ribosomal protein S3 [Elusimicrobium minutum Pei191]
gi|226697709|sp|B2KEL5|RS3_ELUMP RecName: Full=30S ribosomal protein S3
gi|186971976|gb|ACC98961.1| Ribosomal protein S3 [Elusimicrobium minutum Pei191]
Length = 239
Score = 227 bits (580), Expect = 7e-58, Method: Composition-based stats.
Identities = 103/227 (45%), Positives = 142/227 (62%), Gaps = 3/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KINP RLG W SRWFA AL+ ED +IRE ++ K A ++ + IER
Sbjct: 1 MGHKINPKGLRLGYTQDWQSRWFA-PKNMPALIIEDKRIRELIEERFKMAAISFVGIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
RI +++ARPG++IGKKG DIE++RK L MT S+ ++V E+ PE +A+L+AQSI
Sbjct: 60 GAFLRINIHTARPGVVIGKKGADIEQLRKDLEKMTGSKTFVNVVEIKNPETDASLVAQSI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
Q+E+R + AMK+A++ A+ A G+K++ SGRL GAE++RTE EGRVPL TL A
Sbjct: 120 CMQIEKRAHYGAAMKKAIEKALAGKALGIKIMVSGRLGGAEIARTEWKREGRVPLHTLCA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRD--EVSDSDSTIPAAEHRVVEK 225
IDYGTA A T G G KV++ + S + +HR V +
Sbjct: 180 EIDYGTAEAMTISGKIGCKVWIFKKTHFAKSPKEILHELRKHREVTE 226
>gi|94502529|ref|YP_588156.1| ribosomal protein S3 [Helianthus annuus]
gi|122237664|sp|Q1KXS0|RR3_HELAN RecName: Full=30S ribosomal protein S3, chloroplastic
gi|88656933|gb|ABD47184.1| ribosomal protein S3 [Helianthus annuus]
Length = 218
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 82/218 (37%), Positives = 132/218 (60%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINPI FRLG +S WFA+ Y L ED KIR Y++ ++++ G+
Sbjct: 1 MGQKINPIGFRLGTTQGHHSLWFAQPKNYSEGLQEDQKIRNYIKNYVQKNMKTSSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ +II+Y P ++I + IE+++ +K N N ++++++ + KP
Sbjct: 61 ARIEIQKRIDLIQIIIYMGFPKILIESRPRGIEELQMNLQKEFNSVNRKLNIAITRIEKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
N ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E
Sbjct: 121 YGNPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY + T YG GIK+++ + E
Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIEGE 218
>gi|330850780|ref|YP_004376458.1| ribosomal protein S3 [Olea europaea subsp. europaea]
gi|328795470|emb|CBR30352.1| ribosomal protein S3 [Olea europaea subsp. europaea]
Length = 218
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 78/218 (35%), Positives = 133/218 (61%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG +S WFA+ Y L ED KIR++++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFAQPKNYSEGLQEDQKIRDFIKNYIQKNMRISSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A I I++ ++I++ P L+I + I++++ +K N N ++++++ + KP
Sbjct: 61 AHIEIQKRIDLIQVIIFMGFPKLLIENRPRGIQELQINLEKEFNYVNQKLNVAITRIAKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
N ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E
Sbjct: 121 YGNPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY + T YG GIK+++ + +E
Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDEE 218
>gi|256261833|gb|ACU65956.1| ribosomal protein S3 [Mulberry yellow dwarf phytoplasma]
Length = 252
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 130/215 (60%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++ +PG+IIGK G K+ KL +T +++L+V EV + A LI
Sbjct: 61 KEKNKNRITISVHTDKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKIALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|225020392|ref|ZP_03709584.1| hypothetical protein CORMATOL_00399 [Corynebacterium matruchotii
ATCC 33806]
gi|224946781|gb|EEG27990.1| hypothetical protein CORMATOL_00399 [Corynebacterium matruchotii
ATCC 33806]
Length = 237
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 102/216 (47%), Positives = 145/216 (67%), Gaps = 3/216 (1%)
Query: 13 GVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSAR 72
G+ W S WFA EY L ED+KIR+YL +L +AG+A ++IERT RI +++AR
Sbjct: 2 GITSDWKSHWFAD-KEYADYLAEDIKIRDYLTKNLDRAGIADVVIERTRDRVRIDIHTAR 60
Query: 73 PGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRR 132
PG++IG++G++ +++R KL +T ++ L++ EV + NA L+AQSIA+QL RV FRR
Sbjct: 61 PGIVIGRRGSEADRLRTKLEKLTRKQVALNILEVKNIDANAQLVAQSIAEQLTNRVAFRR 120
Query: 133 AMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAET 191
AM++A+Q AM + G+KV+ +GRL GAE+SRTE Y EGRVPL TLRA IDYGT A T
Sbjct: 121 AMRKAIQGAMRQPQVKGIKVMCAGRLGGAEMSRTERYHEGRVPLHTLRAEIDYGTYEAHT 180
Query: 192 AYGSCGIKVYVSLRDEVSD-SDSTIPAAEHRVVEKD 226
+G G+KV++ D V + +S + A R D
Sbjct: 181 TFGRIGVKVWIYKGDVVGNRRESELNAPTERRGRGD 216
>gi|95114359|gb|ABF55684.1| ribosomal protein S3 [Wheat blue dwarf phytoplasma]
Length = 233
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 133/215 (61%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+WF E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWFVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
+ I V++A+PG+IIGK G K+ K+ +T +++L+V EV + A LI
Sbjct: 61 KEKNKNSITISVHTAKPGVIIGKDGDTRNKLVAKIKELTQKDVNLNVLEVKNSDKIALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIK+++ + +
Sbjct: 181 TLRADIDYAAVEAHTNYGVLGIKIWIFHGEVLPGQ 215
>gi|156573699|gb|ABU85182.1| ribosomal protein S3 [Anethum graveolens]
Length = 218
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 79/218 (36%), Positives = 133/218 (61%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + +S WF + Y L ED KIR++++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFKQPKNYSEGLQEDQKIRDFIKNYVQKNMKISSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I+Y P L+I + IE+++ +K N N ++++++ + KP
Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKLLIENRPGGIEELQMNLQKEFNCVNRKLNITITRIAKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ ++A+ IA QL+ RV FR+AMK+A++ + G++V SGR++G E++R E
Sbjct: 121 YGSPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQISGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY + T YG GIK+++ + E
Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDGE 218
>gi|133923|sp|P29223|RS3_ACHLA RecName: Full=30S ribosomal protein S3
Length = 265
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 97/215 (45%), Positives = 137/215 (63%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+ +A + AL+ ED IRE+L + +AGV++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESKRYADQKDVPALIKEDALIREFLNENFSKAGVSQIEIERV 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
+ + I +Y ++PG+ +GK+ + K L +T E+ L++ EV +PE A L+
Sbjct: 61 KAKSKERVTIKLYVSKPGIALGKEASVKNKAVSNLEYLTKKEVILNIIEVRRPEKVAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQSIA+QLE R FRRA K A+Q A++ GA G++ + SGRL GAE++R+E Y EGRVPL
Sbjct: 121 AQSIAEQLENRASFRRAQKMAIQRALKSGAKGIRTLVSGRLGGAEMARSEGYSEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA +DY TA A T YG GIKV++ + +
Sbjct: 181 TLRADVDYATAEASTTYGILGIKVWIYHGEVLPGQ 215
>gi|126680545|gb|ABO26489.1| ribosomal protein S3 [American potato purple top wilt phytoplasma]
Length = 251
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 95/215 (44%), Positives = 136/215 (63%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW+S+WFA E L+ ED IR+ + K++ +++I I+R
Sbjct: 1 MGQKTNPNGLRLGIIRTWDSQWFANDKEIPVLIKEDFLIRQLINNFSKKSSISQIEIQRL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
T I +++A+PG IIGK G + KI ++L +T I+L++ EV E + L+
Sbjct: 61 KEKTKNCITISIHTAKPGFIIGKDGENRNKIVEQLKKLTKKNINLNILEVKNSEKISLLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQS+A+QLE R+ FRR K A+Q A++ GA G+KV+ SGRLNG E++R+E + EGRVPL
Sbjct: 121 AQSMAEQLENRMKFRRVQKLAIQKALKSGAKGIKVLISGRLNGDEIARSEGHSEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAALEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|307718212|ref|YP_003873744.1| 30S ribosomal protein S3 [Spirochaeta thermophila DSM 6192]
gi|306531937|gb|ADN01471.1| 30S ribosomal protein S3 [Spirochaeta thermophila DSM 6192]
Length = 234
Score = 227 bits (579), Expect = 9e-58, Method: Composition-based stats.
Identities = 96/211 (45%), Positives = 136/211 (64%), Gaps = 2/211 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--HLKQAGVAKILIE 58
MGQK+NP RLG+N TW S+WF +Y +LHEDL +R+ L K A V + I
Sbjct: 1 MGQKVNPYGLRLGINKTWKSKWFVDLKDYAKVLHEDLLLRKRLLALPEAKAANVGDVEII 60
Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118
R + ++V++ RPG++IG KG IE+I +L M + ++ + + E+ +PE +A ++AQ
Sbjct: 61 RHPQRVMLVVHTPRPGVLIGAKGATIERIGAELQKMVSKKLQIKIKEIKRPEAHAQVVAQ 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
+IA QLE R FRR MK AV +AM+ G G+KV SGRL GAE++R+E + GRVPL TL
Sbjct: 121 NIAAQLEHRASFRRVMKLAVANAMKAGVQGIKVRVSGRLGGAEIARSEVQMAGRVPLHTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVS 209
RA IDYG A A T YG G+KV++ + +
Sbjct: 181 RADIDYGFAEARTTYGVIGVKVWIFHGETLG 211
>gi|32965382|gb|AAP91857.1| ribosomal protein S3 [Leafhopper-borne phytoplasma]
Length = 244
Score = 227 bits (579), Expect = 9e-58, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 132/215 (61%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+WF E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWFVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++A+PG+IIGK G K+ K+ +T +++L+V EV + A LI
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKIKELTQKDVNLNVLEVKNSDKIALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRIQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIK+++ + +
Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKIWIFHGEALPGQ 215
>gi|300870641|ref|YP_003785512.1| 30S ribosomal protein S3 [Brachyspira pilosicoli 95/1000]
gi|300688340|gb|ADK31011.1| 30S ribosomal protein S3 [Brachyspira pilosicoli 95/1000]
Length = 245
Score = 227 bits (579), Expect = 1e-57, Method: Composition-based stats.
Identities = 97/243 (39%), Positives = 144/243 (59%), Gaps = 17/243 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ----------- 49
MGQK++PI RLGVN TW+S+WF G Y LHEDL IR Y+ + +
Sbjct: 1 MGQKVSPIGLRLGVNKTWSSKWFEDGRTYADSLHEDLSIRRYIMNYYYKTLKEEQKKIGG 60
Query: 50 ------AGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSV 103
++ I I R + + +AR G+++G KG +E ++ + + I++S+
Sbjct: 61 KKESFDPAISDIQIVRFPDRINVFISTARVGVVVGPKGQRVEAVKAAVQKLVKKPINVSI 120
Query: 104 NEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELS 163
+E+ + E++ATL AQS+A+QLE RV FRRAMK + AM+ GA G+KV+ SGRL GA+++
Sbjct: 121 SEIKEAELDATLAAQSVARQLEMRVAFRRAMKSVITQAMKKGAKGIKVMCSGRLAGADIA 180
Query: 164 RTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223
RTE Y G VPL T+RA+IDYGTA A T +G G+KV++ + + +S A +
Sbjct: 181 RTEQYKNGSVPLHTIRANIDYGTAEASTTFGIIGVKVWIYKGEILDKKESKQDDAGKVIS 240
Query: 224 EKD 226
K
Sbjct: 241 AKG 243
>gi|114329786|ref|YP_740604.1| ribosomal protein S3 [Platanus occidentalis]
gi|122165999|sp|Q09G07|RR3_PLAOC RecName: Full=30S ribosomal protein S3, chloroplastic
gi|114054424|gb|ABI49818.1| ribosomal protein S3 [Platanus occidentalis]
Length = 217
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 79/217 (36%), Positives = 132/217 (60%), Gaps = 10/217 (4%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA-------GVA 53
MGQKINP+ FRLG +S WFA+ Y L ED KIR+ ++ ++++ G+A
Sbjct: 1 MGQKINPLGFRLGTTQNHHSVWFAQPKSYSEGLQEDQKIRDCIKNYVQKNKRIPLVEGIA 60
Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPE 110
+I I++ ++I+Y P L+I + IE+++ +K N N ++++++ + KP
Sbjct: 61 RIEIQKRIDLIQVIIYMGFPKLLIEDRPRGIEELQINLQKEFNSMNRKLNIAITRIAKPY 120
Query: 111 INATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLE 170
++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E E
Sbjct: 121 GQPNILAEYIAGQLKSRVSFRKAMKKAIELTEQTDTKGIQVQIAGRIDGKEIARVEWIRE 180
Query: 171 GRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
GRVPLQT+RA IDY + T YG GIK+++ + +E
Sbjct: 181 GRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFVDEE 217
>gi|290487108|gb|ADD29938.1| ribosomal protein S3 [Berberidopsis corallina]
Length = 218
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 79/218 (36%), Positives = 131/218 (60%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG +S WFA+ Y L ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFAQPKNYSEGLQEDQKIRDCIKNYVQKNMRISSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK---IRKKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I+Y P L+I + IE+ +K N N ++++++ + KP
Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKLLIEGRPRGIEELQMNIQKEFNCVNRKLNIAITRIAKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E
Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY + T YG GIK+++ + +E
Sbjct: 181 EGRVPLQTIRAKIDYCSYTVGTIYGVLGIKIWIFIDEE 218
>gi|108794918|gb|ABG20962.1| ribosomal protein S3 [Chinaberry witches'-broom phytoplasma]
Length = 252
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 130/215 (60%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++A+PG+IIGK G K+ KL T +++L+V EV + A LI
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKEPTQKDVNLNVLEVKNSDKIALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|86132550|ref|ZP_01051143.1| 30S ribosomal protein S3 [Dokdonia donghaensis MED134]
gi|85816792|gb|EAQ37977.1| 30S ribosomal protein S3 [Dokdonia donghaensis MED134]
Length = 239
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 99/216 (45%), Positives = 149/216 (68%), Gaps = 2/216 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ W S W+ G++YG L ED KIR Y+ L +A V++++IERT
Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDKLAEDDKIRRYIHARLSKASVSRVIIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + + +ARPG+IIGK G +++K++++L +T E+ ++++E+ +PE++A L+ QS+
Sbjct: 60 LKLVTVTITTARPGIIIGKGGQEVDKLKEELKKLTGKEVQINIHEIKRPELDAFLVGQSV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E R+ FRRA+K A+ +AMR A+G+K+ SGRLNGAE++RTE Y +GR+PL T RA
Sbjct: 120 ARQIEGRISFRRAIKMAIAAAMRMNAEGIKIQISGRLNGAEMARTESYKDGRIPLSTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
IDY A T YG G+KV++ + EV P
Sbjct: 180 DIDYALVEAHTTYGRLGVKVWIM-KGEVYGKRELSP 214
>gi|327402777|ref|YP_004343615.1| 30S ribosomal protein S3P [Fluviicola taffensis DSM 16823]
gi|327318285|gb|AEA42777.1| SSU ribosomal protein S3P [Fluviicola taffensis DSM 16823]
Length = 251
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 99/212 (46%), Positives = 140/212 (66%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG W S W+ Y + ED KIR+YL L +A ++KI+IERT
Sbjct: 1 MGQKTNPIGNRLGFIHGWESNWYGGD-NYKDKIIEDDKIRKYLHARLSRASISKIIIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + + +ARPG+IIGK G +++K++++L +T EI +++ EV +PE++A L+A I
Sbjct: 60 LKLVTVTINTARPGVIIGKGGQEVDKLKEELKKLTKKEIQINIFEVKRPELDARLVADGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E R+ FRRA+K ++ S MR GA+G+KV SGRLNGAE++R+E Y +GR PL T RA
Sbjct: 120 ARQIEARISFRRAIKMSIGSTMRMGAEGIKVKISGRLNGAEMARSEMYKDGRTPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
IDY A T YG GIKV++ + D
Sbjct: 180 DIDYAVGEALTTYGLIGIKVWICKGEVYGRRD 211
>gi|225542954|emb|CAX63063.1| rps3 protein [Egyptian periwinkle phytoplasma]
Length = 252
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 130/215 (60%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKIALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK SGRL GAE++R+E + EG+VPL
Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTFISGRLGGAEIARSEGHAEGKVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|158337816|ref|YP_001518992.1| 30S ribosomal protein S3 [Acaryochloris marina MBIC11017]
gi|189044989|sp|B0C1D9|RS3_ACAM1 RecName: Full=30S ribosomal protein S3
gi|158308057|gb|ABW29674.1| 30S ribosomal protein S3 [Acaryochloris marina MBIC11017]
Length = 241
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 99/222 (44%), Positives = 135/222 (60%), Gaps = 2/222 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRLG+ SRWFA Y LL ED K+R Y+ +L AG+A + IER
Sbjct: 1 MGQKIHPTGFRLGITQDHWSRWFADTDRYPELLQEDFKVRNYVNKNLSNAGIAGVRIERK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN--SEIHLSVNEVPKPEINATLIAQ 118
+ V +ARPG+++G+ G+ IE +R L I ++V EV + + ATLIA+
Sbjct: 61 ADQIDLEVRTARPGVVVGRGGSGIESLRVGLQKELGDDRPIRINVVEVARVDAEATLIAE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
I QQL RRV FRR +++A+Q A R G +G+K+ GRLNGAE++R+E EGRVPL TL
Sbjct: 121 YIVQQLVRRVSFRRVVRQAIQRAQRAGVEGIKIQVGGRLNGAEIARSEWTREGRVPLHTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
RA+IDY A T YG G+KV+V + + +D E
Sbjct: 181 RANIDYSYRTASTTYGILGVKVWVFKGEVIPGADEQPTNREP 222
>gi|146432294|gb|ABQ41131.1| ribosomal protein S3 [Czech Echinacea purpurea phyllody
phytoplasma]
Length = 220
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 133/215 (61%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+WF E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWFVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
+ I V++A+PG+IIGK G K+ K+ +T +++L+V EV + A LI
Sbjct: 61 KEKNKNSITISVHTAKPGVIIGKDGDTRNKLVAKIKELTQKDVNLNVLEVKNSDKIALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIK+++ + +
Sbjct: 181 TLRADIDYAAVEAHTNYGVLGIKIWIFHGEVLPGQ 215
>gi|159135072|gb|ABW88123.1| ribosomal protein S3 [Carrot phytoplasma sp. ca2006/1]
Length = 237
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKVALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A++LE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEKLENRMFFRRVQKMAIQKAIKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|32965366|gb|AAP91845.1| ribosomal protein S3 [Clover phyllody phytoplasma]
Length = 244
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 134/215 (62%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+WF E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWFVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERX 60
Query: 61 HKNCR----IIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
+ + I V++A+PG+IIGK G K+ K+ +T +++L+V EV + A LI
Sbjct: 61 KEKNKXSITISVHTAKPGVIIGKDGDTRNKLVAKIKELTQKDVNLNVLEVKNSDKIALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIK+++ + +
Sbjct: 181 TLRADIDYAAVEAHTNYGVLGIKIWIFHGEVLPGQ 215
>gi|37731293|gb|AAO74971.1| ribosomal protein S3 [Aster yellows phytoplasma]
gi|37731297|gb|AAO74974.1| ribosomal protein S3 [Aster yellows phytoplasma]
Length = 252
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 130/215 (60%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKIALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K +Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRVQKMTIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|32965370|gb|AAP91848.1| ribosomal protein S3 [Clover phyllody phytoplasma]
Length = 244
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 133/215 (61%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+WF E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWFVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
+ I V++A+PG+IIGK G K+ K+ +T +++L+V EV + A LI
Sbjct: 61 KEKNKNSITISVHTAKPGVIIGKDGDTRNKLVAKIKELTQKDVNLNVLEVKNSDKIALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIK+++ + +
Sbjct: 181 TLRADIDYAAVEAHTNYGVLGIKIWIFHGEVLPGQ 215
>gi|281422245|ref|ZP_06253244.1| ribosomal protein S3 [Prevotella copri DSM 18205]
gi|281403750|gb|EFB34430.1| ribosomal protein S3 [Prevotella copri DSM 18205]
Length = 243
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 100/220 (45%), Positives = 146/220 (66%), Gaps = 1/220 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLGV W+S WF G +G L ED KIR+YL L +A +++I+IERT
Sbjct: 1 MGQKVNPISNRLGVIRGWDSNWF-GGKNFGDNLVEDQKIRKYLNERLAKASISRIIIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I + +ARPG++IGK G D++K++++L + +I +++ EV KPE++AT++ ++I
Sbjct: 60 LKLVTITICTARPGIVIGKGGQDVDKLKEELKKLYKKDIQINIFEVKKPELDATIVGKNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A Q+E + +RRA+K AV + MR GA+G+KV +GRLNGAE++R E Y EGR PL T RA
Sbjct: 120 ATQIEHMIAYRRAIKMAVANTMRAGAEGIKVQITGRLNGAEMARKEMYKEGRTPLHTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
IDY A T G GIKV++ + +D T ++
Sbjct: 180 DIDYCQCEALTKVGLLGIKVWICRGEVYGKADLTPNFSQD 219
>gi|183217779|ref|YP_001837399.1| ribosomal protein S3 [Guizotia abyssinica]
gi|179366294|gb|ACB86565.1| ribosomal protein S3 [Guizotia abyssinica]
Length = 218
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 81/218 (37%), Positives = 132/218 (60%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINPI FRLG +S WFA+ Y L ED KIR Y++ ++++ G+
Sbjct: 1 MGQKINPIGFRLGTTQGHHSLWFAQPKNYSEGLQEDQKIRNYIKNYVQKNMKTSSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ +II+Y P ++I + IE+++ +K + N ++++++ + KP
Sbjct: 61 ARIEIQKRIDLIQIIIYMGFPKILIESRPRGIEELQMNLQKEFHSANRKLNIAITRIEKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
N ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E
Sbjct: 121 YGNPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY + T YG GIK+++ + E
Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIEGE 218
>gi|81176290|ref|YP_398367.1| ribosomal protein S3 [Lactuca sativa]
gi|91207769|sp|Q332T8|RR3_LACSA RecName: Full=30S ribosomal protein S3, chloroplastic
gi|78675208|dbj|BAE47634.1| chloroplast 30S ribosomal protein S3 [Lactuca sativa]
gi|88657021|gb|ABD47271.1| ribosomal protein S3 [Lactuca sativa]
Length = 218
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 82/218 (37%), Positives = 131/218 (60%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINPI FRLG +S WFA+ Y L ED KIR Y+Q ++++ G+
Sbjct: 1 MGQKINPIGFRLGTTQGHHSLWFAQPKNYSEGLQEDKKIRTYIQNYVQKNMKTSSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ +II+Y P ++I + IE+++ +K + N ++++++ + KP
Sbjct: 61 ARIEIQKRIDLIQIIIYMGFPKILIESRPRGIEELQMNLQKEFHSVNRKLNIAITRIEKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
N ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E
Sbjct: 121 YGNPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY T YG GIK+++ + E
Sbjct: 181 EGRVPLQTIRAKIDYCCYTVRTIYGVLGIKIWIFIDGE 218
>gi|308191286|gb|ADO16226.1| ribosomal protein S3 [Lilac little leaf phytoplasma]
Length = 237
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 133/215 (61%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+WF E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWFVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
+ I V++A+PG+IIGK G K+ K+ +T +++L+V EV + A LI
Sbjct: 61 KEKNKNSITISVHTAKPGVIIGKDGDTRNKLVAKIKELTQKDVNLNVLEVKNSDKIALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIK+++ + +
Sbjct: 181 TLRADIDYAAVEAHTNYGVLGIKIWIFHGEVLPGQ 215
>gi|32965362|gb|AAP91842.1| ribosomal protein S3 [Clover phyllody phytoplasma]
Length = 244
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 133/215 (61%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+WF E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWFVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
+ I V++A+PG+IIGK G K+ K+ +T +++L+V EV + A LI
Sbjct: 61 KEKNKNSITISVHTAKPGVIIGKDGDTRNKLVAKIKELTQKDVNLNVLEVKNSDKIALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIK+++ + +
Sbjct: 181 TLRADIDYAAVEAHTNYGVLGIKIWIFHGEVLPGQ 215
>gi|283768456|ref|ZP_06341368.1| ribosomal protein S3 [Bulleidia extructa W1219]
gi|283104848|gb|EFC06220.1| ribosomal protein S3 [Bulleidia extructa W1219]
Length = 265
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 97/224 (43%), Positives = 138/224 (61%), Gaps = 4/224 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+GV W SRW+A S++G LL+ED +IR +L+ K A +++I IERT
Sbjct: 1 MGQKVSPIGLRVGVIRDWESRWYADKSDFGDLLNEDNRIRGFLEKEFKDAYISRIEIERT 60
Query: 61 HKNC-RIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLI 116
K ++I+ ARPG ++GK G + +RKKL +T + + V V P+++A L+
Sbjct: 61 GKKDAKVIIRCARPGALLGKDGDQDKMVVLRKKLGKLTGGKNVKIDVIAVANPDLDARLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
A+ IA+QLE R FR A K+A+Q MR GA G+K +A GRL GAE++R E Y G VPL
Sbjct: 121 ARRIAEQLEARQSFRIAQKKAIQQTMRSGAKGIKTLAKGRLGGAEIARQEGYSRGVVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
TLR+ IDY A T YG G+KV++ + + P A
Sbjct: 181 TLRSDIDYSAQEATTTYGKLGVKVWICRGEVLPGQLVKEPEAPK 224
>gi|242620048|ref|YP_003002052.1| 30S ribosomal protein S3 [Aureococcus anophagefferens]
gi|239997293|gb|ACS36816.1| 30S ribosomal protein S3 [Aureococcus anophagefferens]
Length = 213
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 96/212 (45%), Positives = 140/212 (66%), Gaps = 4/212 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRL S WFA+ ++Y +LL +D KIREY+ + AG++ I IERT
Sbjct: 1 MGQKVHPLGFRLNTTQKHKSTWFAQINQYSSLLEQDAKIREYITANYDSAGISDIEIERT 60
Query: 61 HKNCRI--IVYSARPGLIIGKKGTDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATLI 116
+K I +Y A+PG+II + G+ + + KKL ++ +I + V EV +P+ +A L+
Sbjct: 61 YKLNNIFLKIYVAKPGVIITESGSGLINLTKKLKSLLPRVNKISIDVFEVAEPDTHANLL 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ IA QL RRV F+RA+++A+ A G+KV +GRLNGAE++RTE EGR+PLQ
Sbjct: 121 AQFIANQLVRRVAFKRAVRKAIDRAQAQDIKGIKVQIAGRLNGAEIARTEWVKEGRMPLQ 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208
TLRA IDY TA A+T YG G+KV++ + +
Sbjct: 181 TLRAEIDYATASAKTIYGILGVKVWLFKGESM 212
>gi|32965390|gb|AAP91863.1| ribosomal protein S3 [Plantago virescence phytoplasma]
gi|32965398|gb|AAP91869.1| ribosomal protein S3 [Chrysanthemum yellows phytoplasma]
Length = 244
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKVALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A++LE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEKLENRMFFRRVQKMAIQKAIKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|163786184|ref|ZP_02180632.1| putative 30S ribosomal protein S3 [Flavobacteriales bacterium
ALC-1]
gi|159878044|gb|EDP72100.1| putative 30S ribosomal protein S3 [Flavobacteriales bacterium
ALC-1]
Length = 238
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 99/216 (45%), Positives = 149/216 (68%), Gaps = 2/216 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ W S W+ G++YG L ED K+R+Y+ L +A V++++IERT
Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDKLAEDDKVRKYIHARLSKASVSRVIIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + + +ARPG+IIGK G +++K++++L +T E+ L++ E+ +PE++A L+A S+
Sbjct: 60 LKLVTVTITTARPGIIIGKGGQEVDKLKEELKKITGKEVQLNIFEIKRPELDAHLVAASV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E R+ +RRA+K A+ +AMR A+G+K+ SGRLNGAE++R+E Y EGR+PL T RA
Sbjct: 120 ARQIESRISYRRAIKMAIAAAMRMNAEGIKIQISGRLNGAEMARSEHYKEGRIPLSTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
IDY A T YG GIKV++ + EV P
Sbjct: 180 DIDYALVEAHTTYGRLGIKVWIM-KGEVYGKRELSP 214
>gi|317046211|ref|YP_004072500.1| ribosomal protein S3 [Corynocarpus laevigata]
gi|309252928|gb|ADO60348.1| ribosomal protein S3 [Corynocarpus laevigata]
Length = 218
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 78/218 (35%), Positives = 134/218 (61%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG N +S WFA+ +Y L ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGANQGHHSLWFAQPQKYSEGLQEDQKIRDCIKNYVQKNMRIFSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIG---KKGTDIEKIRKKLSNMTNSEIHLSVNEVPKP 109
++I I++ ++I+Y P L+I ++ +++ +K N N ++++++ + P
Sbjct: 61 SRIEIQKRIDLIQVIIYMGFPKLLIEGGSRRIEELQMNVQKELNCVNQKLNIAITRIANP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ ++A+ IA QL+ RV FR+AMK+A++ + G G++V +GRL+G E++R E
Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRLDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY + T YG GIK+++ + +E
Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFVDEE 218
>gi|32965394|gb|AAP91866.1| ribosomal protein S3 [Hydrangea phyllody phytoplasma]
Length = 244
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 133/215 (61%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERX 60
Query: 61 HKNCR----IIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
+ + I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI
Sbjct: 61 KEKNKXRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKVALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A++LE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEKLENRMFFRRVQKMAIQKAIKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|290487120|gb|ADD29944.1| ribosomal protein S3 [Heuchera sanguinea]
Length = 217
Score = 226 bits (577), Expect = 2e-57, Method: Composition-based stats.
Identities = 78/217 (35%), Positives = 129/217 (59%), Gaps = 11/217 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG +S WFA+ Y L ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFAQPKNYSEGLQEDQKIRDCIKNYVQKNMRISSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDI---EKIRKKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I+Y P L+I + I + +K N N ++++++ + KP
Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKLLIEGRPRRIEDLQMNVQKELNYVNRKLNIAITRIAKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
N ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E
Sbjct: 121 YGNPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
EGRVPLQT+RA IDY + T YG GIK+++ + +
Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFVDE 217
>gi|7388188|sp|O66095|RS3_PHYS1 RecName: Full=30S ribosomal protein S3
gi|3047153|gb|AAC13662.1| ribosomal protein S3 [Phytoplasma sp. STRAWB1]
Length = 251
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 136/215 (63%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQKINP RLG+ TW+S+WF + E AL+ ED IRE + K++ +++I I+R
Sbjct: 1 MGQKINPNGLRLGIIRTWDSQWFVQDKEIPALIKEDYLIRELINNFSKKSAISQIEIQRL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
T +I +++A+PG+IIG+ G K+ KL +T ++ L++ EV E A LI
Sbjct: 61 KEKTKNRIKIYIHTAKPGVIIGRDGDTRNKMVAKLKELTQKDVDLNILEVKNSEKIALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA+QLE R+ FR K A+Q A++ G G+K + SGRLNGAE++R+E EGRVPL
Sbjct: 121 AQNIAEQLENRMNFRHVQKMAIQKALKAGVKGIKTLVSGRLNGAEIARSEGNDEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY + A T YG G+KV++ + +
Sbjct: 181 TLRADIDYASLQAYTTYGVLGVKVWIFHGEVLPGQ 215
>gi|325126903|ref|YP_004286140.1| ribosomal protein S3 [Fragaria vesca subsp. vesca]
gi|324022815|gb|ADY15389.1| ribosomal protein S3 [Fragaria vesca subsp. vesca]
Length = 218
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 79/218 (36%), Positives = 135/218 (61%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG +S WFA+ Y L ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGATQGHHSVWFAQPKNYSEDLQEDQKIRDCIKNYVQKNLKISSNVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I+Y P L+I ++ IE+++ +K N N ++++++ ++ P
Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKLLIEERTRKIEELQFNVQKELNCVNRKLNIAITKIVNP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ ++A+ IA QL+ RV FR+AMK+A++ + G G++V +GR++G E++R E
Sbjct: 121 YSHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY + T YG GIK+++ + +E
Sbjct: 181 EGRVPLQTIRAKIDYCSYAVRTIYGVLGIKIWIFVDEE 218
>gi|315186325|gb|EFU20086.1| SSU ribosomal protein S3P [Spirochaeta thermophila DSM 6578]
Length = 234
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 96/208 (46%), Positives = 135/208 (64%), Gaps = 2/208 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--HLKQAGVAKILIE 58
MGQK+NP RLG+N TW S+WF +Y +LHEDL +R+ L K A V + I
Sbjct: 1 MGQKVNPYGLRLGINKTWKSKWFVDLKDYAKVLHEDLLLRKRLLALPEAKAANVGDVEII 60
Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118
R + ++V++ RPG++IG KG IE+I +L M + ++ + + E+ +PE +A ++AQ
Sbjct: 61 RHPQRVMLVVHTPRPGVLIGAKGATIERIGAELQKMVSKKLQIKIKEIKRPEAHAQVVAQ 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
+IA QLE R FRR MK AV +AM+ G G+KV SGRL GAE++R+E + GRVPL TL
Sbjct: 121 NIAGQLEHRASFRRVMKLAVANAMKAGVQGIKVRVSGRLGGAEIARSEVQMAGRVPLHTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRD 206
RA IDYG A A T YG G+KV++ +
Sbjct: 181 RADIDYGFAEARTTYGVIGVKVWIFHGE 208
>gi|166033620|gb|ABY78838.1| ribosomal protein S3 [Potato purple top phytoplasma YN-169]
Length = 241
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 133/215 (61%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW+S+W E AL+ ED IR + K+ +++I I+R
Sbjct: 1 MGQKTNPNGLRLGIIRTWDSQWCVNDKEIPALIKEDFLIRRLINDFNKKNSISQIEIQRL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
T I +++A+PG+IIGK G K+ +L +T +I+L++ EV PE A L+
Sbjct: 61 KEKTKNRITISIHTAKPGIIIGKDGETRNKLIAQLQKITQKDINLNILEVKNPEKTALLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQS+A+QLE R+ FRR K A+Q A++ GA G+KV+ SGRLNG E++R+E +GRVPL
Sbjct: 121 AQSMAEQLENRMKFRRVQKMAIQKALKAGAKGIKVLVSGRLNGDEIARSEGSAKGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAALEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|298491404|ref|YP_003721581.1| 30S ribosomal protein S3 ['Nostoc azollae' 0708]
gi|298233322|gb|ADI64458.1| ribosomal protein S3 ['Nostoc azollae' 0708]
Length = 251
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 103/221 (46%), Positives = 141/221 (63%), Gaps = 7/221 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL-----KQAGVAKI 55
MGQKI+P+ FRLG+ SRWFA Y LL ED K+R+Y+ L AG++++
Sbjct: 1 MGQKIHPVGFRLGITQEHQSRWFAVPDRYPELLQEDHKLRKYIDQKLGRYAQNNAGISEV 60
Query: 56 LIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINA 113
IER + V +ARPG+++G+ G IE +R L + +N +I ++V EV + + +A
Sbjct: 61 RIERKADQIDLEVRTARPGVVVGRGGQGIESLRTGLQELLGSNRQIRINVVEVQRVDADA 120
Query: 114 TLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV 173
LIA+ IAQQLERRV FRR +++A+Q A R G G+KV SGRLNGAE++RTE EGRV
Sbjct: 121 YLIAEYIAQQLERRVSFRRVVRQAIQRAQRAGVQGIKVQVSGRLNGAEIARTEWTREGRV 180
Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
PL TLRA IDY A+T YG GIKV+V + + + T
Sbjct: 181 PLHTLRADIDYSYCTAQTIYGILGIKVWVFKGEIIPGQEET 221
>gi|302337483|ref|YP_003802689.1| ribosomal protein S3 [Spirochaeta smaragdinae DSM 11293]
gi|301634668|gb|ADK80095.1| ribosomal protein S3 [Spirochaeta smaragdinae DSM 11293]
Length = 233
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 98/229 (42%), Positives = 139/229 (60%), Gaps = 2/229 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--HLKQAGVAKILIE 58
MGQK+NP+ RLG+N TW S+W+ EY LHEDL +R+ L+ + A ++ I I
Sbjct: 1 MGQKVNPVGMRLGINKTWKSKWYVDPREYADTLHEDLALRKELESCPETQGADISDIEII 60
Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118
R + I+V ++RPG+IIG KG++IEKI +L + +I + + EV +PE +A +IA+
Sbjct: 61 RHPQRITIVVKTSRPGIIIGAKGSNIEKIGARLQKIAKKKIQIKIKEVKRPEADAQIIAE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
+IA+QL+ R FRR +K AV AM+ G GVKV SGRL GAE+SR + EGRVPL TL
Sbjct: 121 NIARQLKMRGAFRRTLKMAVSKAMQSGVQGVKVRISGRLGGAEMSRVAWHHEGRVPLHTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
RA IDYG A + T +G G+KV+ + R + +
Sbjct: 181 RADIDYGFAESRTTFGVIGVKVWTFNGEVYQKDQKEDAGLLVRKKREKT 229
>gi|296120753|ref|YP_003628531.1| ribosomal protein S3 [Planctomyces limnophilus DSM 3776]
gi|296013093|gb|ADG66332.1| ribosomal protein S3 [Planctomyces limnophilus DSM 3776]
Length = 233
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 93/227 (40%), Positives = 148/227 (65%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+ P FR+G+ W SRW+A E+G LL ED KIR +++ + AG+ +I IERT
Sbjct: 1 MGQKVRPTGFRVGIVEDWRSRWYATKKEFGDLLIEDQKIRRFIKTKYEFAGIPRIEIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++ARPG+IIGKKG ++++++ +L ++T + L + E+ +P +A L+A+ I
Sbjct: 61 RDQVIVHLHTARPGIIIGKKGQEVDRLKAELEDLTGRRMELKIVEIHQPHRSAVLVAEDI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQL +R FRR MKR++ M G +G+K+ +GRL GAE+SRTE + G +PL TL+
Sbjct: 121 AQQLVKRGSFRRVMKRSLDQVMESGVEGIKIEMNGRLGGAEMSRTEKAIRGSIPLSTLQK 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
HIDYG A+A+T G G+KV++ L + ++ +S A+ + +
Sbjct: 181 HIDYGLAIAKTTMGVIGVKVWIDLGEYRNEEESYGADAQAGQAPQRA 227
>gi|126032123|gb|ABN71578.1| ribosomal protein S3 [Wheat blue dwarf phytoplasma]
Length = 252
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 132/215 (61%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+WF E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWFVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
+ I V++A+PG+IIGK G K+ K+ +T +++L+V EV + A LI
Sbjct: 61 KEKNKNSITISVHTAKPGVIIGKDGDTRNKLVAKIKELTQKDVNLNVLEVKNSDKIALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A + GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKAPKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIK+++ + +
Sbjct: 181 TLRADIDYAAVEAHTNYGVLGIKIWIFHGEVLPGQ 215
>gi|116327230|ref|YP_796950.1| 30S ribosomal protein S3 [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116327270|ref|YP_796990.1| 30S ribosomal protein S3 [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116332116|ref|YP_801834.1| 30S ribosomal protein S3 [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|122280154|sp|Q04PU4|RS3_LEPBJ RecName: Full=30S ribosomal protein S3
gi|122284923|sp|Q055D8|RS3_LEPBL RecName: Full=30S ribosomal protein S3
gi|116119974|gb|ABJ78017.1| 30S Ribosomal protein S3 [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116120014|gb|ABJ78057.1| 30S Ribosomal protein S3 [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116125805|gb|ABJ77076.1| 30S Ribosomal protein S3 [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 225
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 97/218 (44%), Positives = 148/218 (67%), Gaps = 1/218 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI R+G+ W+S WF++ +Y LHED+KIR+++Q AGV K++IER
Sbjct: 1 MGQKVNPIGLRIGITRGWDSIWFSQS-DYKKNLHEDIKIRKFIQSRFSNAGVVKVVIERF 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ + +++A+PG++IG+KG++IE ++K L MT ++L++ EV KPE A IA+SI
Sbjct: 60 PEKINVNLHTAKPGIVIGQKGSNIEAVKKILKTMTEKPVNLNIIEVKKPETVAQCIAESI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A Q+E+R FRR MK+ ++ AMR G +G+K++ SGRLNGA+++R E Y EGR+PL TLRA
Sbjct: 120 ALQIEQRQPFRRVMKQELRRAMRGGVEGIKILISGRLNGADMARRENYKEGRIPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
ID G A+T +G G+KV+ D + + +
Sbjct: 180 KIDLGFKEAKTTFGQIGVKVWTYSGDFIQSKEESEEDK 217
>gi|24213445|ref|NP_710926.1| 30S ribosomal protein S3 [Leptospira interrogans serovar Lai str.
56601]
gi|45658697|ref|YP_002783.1| 30S ribosomal protein S3 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|7388200|sp|Q9XD30|RS3_LEPIN RecName: Full=30S ribosomal protein S3
gi|61215617|sp|Q72NG7|RS3_LEPIC RecName: Full=30S ribosomal protein S3
gi|5163210|gb|AAD40589.1|AF115283_8 ribosomal protein S3 [Leptospira interrogans]
gi|24194215|gb|AAN47944.1| 30S ribosomal protein S3 [Leptospira interrogans serovar Lai str.
56601]
gi|45601941|gb|AAS71420.1| 30S ribosomal protein S3 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 225
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 97/218 (44%), Positives = 148/218 (67%), Gaps = 1/218 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI R+G+ W+S WF++ +Y LHED+KIR+++Q AGV K++IER
Sbjct: 1 MGQKVNPIGLRIGITRGWDSIWFSQS-DYKKNLHEDIKIRKFVQNRFNNAGVVKVVIERF 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ + +++A+PG++IG+KG +IE ++K L MT+ ++L++ EV KPE A IA+SI
Sbjct: 60 PEKINVNLHTAKPGIVIGQKGANIEAVKKILKTMTDKPVNLNIIEVKKPETVAQCIAESI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A Q+E+R FRR MK+ ++ AMR G +G+K++ SGRLNGA+++R E Y EGR+PL TLRA
Sbjct: 120 ALQIEQRQPFRRVMKQELRRAMRGGVEGIKILISGRLNGADMARRENYKEGRIPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
ID G A+T +G G+KV+ D + + +
Sbjct: 180 KIDLGFKEAKTTFGQIGVKVWTYSGDFIQSKEESEEDK 217
>gi|7525071|ref|NP_051096.1| ribosomal protein S3 [Arabidopsis thaliana]
gi|139387290|ref|YP_001123411.1| ribosomal protein S3 [Capsella bursa-pastoris]
gi|139389134|ref|YP_001123852.1| ribosomal protein S3 [Nasturtium officinale]
gi|139389456|ref|YP_001123153.1| ribosomal protein S3 [Olimarabidopsis pumila]
gi|6685913|sp|P56798|RR3_ARATH RecName: Full=30S ribosomal protein S3, chloroplastic
gi|152060531|sp|A4QKN0|RR3_CAPBU RecName: Full=30S ribosomal protein S3, chloroplastic
gi|152060538|sp|A4QLX1|RR3_NASOF RecName: Full=30S ribosomal protein S3, chloroplastic
gi|152060539|sp|A4QJW9|RR3_OLIPU RecName: Full=30S ribosomal protein S3, chloroplastic
gi|5881732|dbj|BAA84423.1| ribosomal protein S3 [Arabidopsis thaliana]
gi|134286350|dbj|BAF49977.1| ribosomal protein S3 [Olimarabidopsis pumila]
gi|134286611|dbj|BAF50235.1| ribosomal protein S3 [Capsella bursa-pastoris]
gi|134287057|dbj|BAF50676.1| ribosomal protein S3 [Nasturtium officinale]
Length = 218
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 77/218 (35%), Positives = 131/218 (60%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + +S WFA+ +Y L ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFAQPKKYSEGLEEDKKIRDCIKNYVQKNIRISSGMEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGT---DIEKIRKKLSNMTNSEIHLSVNEVPKP 109
A+I I++ +II+Y P L+I K +++ +K N N ++++++ + P
Sbjct: 61 ARIEIQKRIDLIQIIIYMGFPKLLIEDKPRRVEELQMNVQKELNCVNRKLNIAITRISNP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E
Sbjct: 121 YGDPNILAEFIAGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+ A IDY + T YG GIK+++ + +E
Sbjct: 181 EGRVPLQTIEAKIDYCSYTVRTIYGVLGIKIWIFVDEE 218
>gi|139388948|ref|YP_001123675.1| ribosomal protein S3 [Lepidium virginicum]
gi|152060536|sp|A4QLE4|RR3_LEPVR RecName: Full=30S ribosomal protein S3, chloroplastic
gi|134286878|dbj|BAF50499.1| ribosomal protein S3 [Lepidium virginicum]
Length = 218
Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 77/218 (35%), Positives = 131/218 (60%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + +S WFA+ +Y L ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFAQPKKYSEGLEEDKKIRDCIKKYVQKNIRISSGMEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGT---DIEKIRKKLSNMTNSEIHLSVNEVPKP 109
A+I I++ +II+Y P L+I K +++ +K N N ++++++ + P
Sbjct: 61 ARIEIQKRIDLIQIIIYMGFPKLLIEDKPRRVEELQMNVQKELNCVNRKLNIAITRISNP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E
Sbjct: 121 YGDPNILAEFIAGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+ A IDY + T YG GIK+++ + +E
Sbjct: 181 EGRVPLQTIEAKIDYCSYTVRTIYGVLGIKIWIFVDEE 218
>gi|290487086|gb|ADD29927.1| ribosomal protein S3 [Aucuba japonica]
Length = 218
Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 77/218 (35%), Positives = 132/218 (60%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG +S WFA+ Y L ED K+R+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFAQPKNYSEGLQEDQKLRDCIKNYVQKNMKIPSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I++ P L+I + IE+++ +K N N ++++++ + KP
Sbjct: 61 ARIEIQKRIDLIQVIIFMGFPKLLIESRPRGIEELQMNLQKEFNCVNRKLNIAITRIAKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
N ++A+ IA QL+ RV FR+AMK+A++ + G+++ +GR++G E++R E
Sbjct: 121 YGNPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY + T YG GIK+++ + E
Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDQE 218
>gi|225542959|emb|CAX63067.1| rps3 protein [Chandigarh periwinkle phytoplasma]
Length = 252
Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+W + E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVKNKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKIALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + E RVPL
Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAESRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|139389988|ref|YP_001123588.1| ribosomal protein S3 [Draba nemorosa]
gi|152060534|sp|A4QL57|RR3_DRANE RecName: Full=30S ribosomal protein S3, chloroplastic
gi|134286790|dbj|BAF50412.1| ribosomal protein S3 [Draba nemorosa]
Length = 218
Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 79/218 (36%), Positives = 132/218 (60%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + +S WFA+ +Y L ED KIR+ ++ +++ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFAQPKKYSEGLEEDKKIRDCIKNYVQNNIRISSGMEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ +II+Y P L+I K IE+++ +K N N ++++++ + P
Sbjct: 61 ARIEIQKRIDLIQIIIYMGFPKLLIEDKPRRIEELQINVQKELNCVNRKLNIAITRISNP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E
Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+ A IDY + T YG GIK+++ + +E
Sbjct: 181 EGRVPLQTIDAKIDYCSYTVRTIYGVLGIKIWIFVDEE 218
>gi|290487084|gb|ADD29926.1| ribosomal protein S3 [Antirrhinum majus]
Length = 220
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 78/218 (35%), Positives = 133/218 (61%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG +S WFA+ Y L ED KIR++++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQNHHSLWFAQPKNYSEGLQEDQKIRDFIKNYVQKNMRISSGTEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A I I++ ++I++ P L+I + IE+++ +K + N ++++++ + KP
Sbjct: 61 ACIEIQKRIDLIQVIIFMGFPKLLIESRPRGIEELQINLQKEFHYVNRKLNIAITRIAKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
N ++A+ IA QL+ RV FR+AMK+A++ + + G++V +GR++G E++R E
Sbjct: 121 YGNPNILAEFIAGQLKNRVSFRKAMKKAIELSEQADTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT++A IDY + T YG GIKV++ + E
Sbjct: 181 EGRVPLQTIQAKIDYCSYTVRTIYGVLGIKVWIFIDKE 218
>gi|212550445|ref|YP_002308762.1| 30S ribosomal protein S3 [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|226697663|sp|B6YQ79|RS3_AZOPC RecName: Full=30S ribosomal protein S3
gi|212548683|dbj|BAG83351.1| 30S ribosomal protein S3 [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 245
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 101/225 (44%), Positives = 155/225 (68%), Gaps = 1/225 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RLG+ W+S W YG +L+ED KIR+YL L +A V++I+IERT
Sbjct: 1 MGQKINPISNRLGIIRGWDSNWCGGD-NYGDILYEDSKIRKYLNTRLAKASVSRIVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K ++V +ARPG+IIGK G +++K++++L +T+ E+ +++ E+ KPE++A ++A +I
Sbjct: 60 LKLVTVVVCTARPGVIIGKGGQEVDKLKEELKRITSKEVQINIFEIKKPELDAAIVASNI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+QLE ++ +R +K A+ +AMR GA+G+KV SGRLNG E++R+E Y EGR+PL TLRA
Sbjct: 120 ARQLEAKIAYRHVIKVAIAAAMRMGAEGIKVQISGRLNGVEIARSEMYKEGRIPLHTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
+IDY + A T G G+KV++ + S D + A R + +
Sbjct: 180 NIDYALSEALTKVGLLGVKVWICRGEVYSKQDFVVQFASQRGMNR 224
>gi|319952190|ref|YP_004163457.1| ssu ribosomal protein s3p [Cellulophaga algicola DSM 14237]
gi|319420850|gb|ADV47959.1| SSU ribosomal protein S3P [Cellulophaga algicola DSM 14237]
Length = 239
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 97/222 (43%), Positives = 150/222 (67%), Gaps = 1/222 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ W S W+ G++YG L ED KIR+Y+ L +A V++++IERT
Sbjct: 1 MGQKTNPIGIRLGIIRGWESNWY-GGNDYGDKLAEDNKIRKYVHARLAKASVSRVIIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I + +ARPG+IIGK G +++K++++L +T+ E+ +++ E+ +PE++A L+A S+
Sbjct: 60 LKLITITITTARPGIIIGKGGQEVDKLKEELKKITDKEVQINIFEIKRPELDANLVAASV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E R+ FRRA+K A+ +AMR ++G+K+ SGRLNGAE++R+E Y +GR+PL T RA
Sbjct: 120 ARQIENRISFRRAIKMAIAAAMRMNSEGIKIQISGRLNGAEMARSETYKDGRIPLSTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
IDY A T YG GIKV++ + D + +
Sbjct: 180 DIDYALHEAHTTYGRLGIKVWIMKGEVYGKRDLSPLVGMEKS 221
>gi|37731273|gb|AAO74956.1| ribosomal protein S3 [Aster yellows phytoplasma]
Length = 252
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKVALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A++LE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEKLENRMFFRRVQKMAIQKAIKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|119511173|ref|ZP_01630290.1| 30S ribosomal protein S3 [Nodularia spumigena CCY9414]
gi|119464161|gb|EAW45081.1| 30S ribosomal protein S3 [Nodularia spumigena CCY9414]
Length = 258
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 104/226 (46%), Positives = 143/226 (63%), Gaps = 8/226 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL-----KQAGVAKI 55
MGQKI+P+ FRLG+ SRWFA Y LL ED K+R+Y++ L AG++++
Sbjct: 1 MGQKIHPVGFRLGITREHQSRWFAVPERYPELLQEDYKLRQYIEKKLGKLAQNNAGISEV 60
Query: 56 LIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINA 113
IER + V +ARPG+++G+ G IE +R L + N +I ++V EV K + +A
Sbjct: 61 RIERKADQIDLEVRTARPGVVVGRGGQGIESLRLGLQEVLGGNRQIRINVVEVQKVDADA 120
Query: 114 TLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV 173
+LI + IAQQLERRV FRR +++A+Q A R G G+K+ SGRLNGAE++RTE EGRV
Sbjct: 121 SLIGEYIAQQLERRVSFRRVVRQAIQRAQRAGVQGIKIQVSGRLNGAEIARTEWTREGRV 180
Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
PL TLRA IDY A+T YG GIKV+V + + + IPA
Sbjct: 181 PLHTLRADIDYAYCTAKTIYGILGIKVWVFKGEIIPGQEE-IPAPP 225
>gi|290487098|gb|ADD29933.1| ribosomal protein S3 [Nelumbo nucifera]
Length = 218
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 77/218 (35%), Positives = 130/218 (59%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG +S WFA+ Y L ED KIR+ ++ +++ G+
Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFAQPKSYSEGLQEDQKIRDCIKNFVQKNMRISSGFEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I+Y P L+I + IE+++ +K + N ++++ + + KP
Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKLLIESRPRGIEELQINVQKEFHSVNRKLNIDITRIAKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
++A+ IA QL+ RV FR+AMK+A++ + G+++ +GR++G E++R E
Sbjct: 121 YGQPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY + T YG GIK+++ + +E
Sbjct: 181 EGRVPLQTIRAKIDYCSYPVRTIYGVLGIKIWIFVDEE 218
>gi|37731204|gb|AAO74911.1| ribosomal protein S3 [Aster yellows phytoplasma]
Length = 252
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKVALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A++LE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEKLENRMFFRRVQKMAIQKAIKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|11466365|ref|NP_038368.1| ribosomal protein S3 [Mesostigma viride]
gi|14548252|sp|Q9MUU2|RR3_MESVI RecName: Full=30S ribosomal protein S3, chloroplastic
gi|7259508|gb|AAF43809.1|AF166114_21 ribosomal protein S3 [Mesostigma viride]
Length = 213
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 96/210 (45%), Positives = 139/210 (66%), Gaps = 2/210 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P+ FRLGV + WFA+ SEY L+ ED IR+YL L AGVA+I I+R
Sbjct: 1 MGQKIHPLGFRLGVTQEHRAHWFAKPSEYKFLVEEDNYIRKYLNAKLANAGVARIDIQRK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN--MTNSEIHLSVNEVPKPEINATLIAQ 118
I +Y+ARPGL++G+ G IE + + L + + +++ + +P++ +TLI +
Sbjct: 61 ADQVEIEIYTARPGLVVGRTGKGIENLIRDLQDKLRNKRKFRITITYLQEPDLESTLIGE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
IAQ+L+ R FRRA+++AVQ A R G G+K+ +GRLNGAE++R+E EGRVPLQTL
Sbjct: 121 FIAQRLQERKPFRRAIRQAVQRAKRAGVQGIKIQVAGRLNGAEIARSEWVREGRVPLQTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208
RA IDY A+T YG GIKV++ +++
Sbjct: 181 RADIDYSHCQAKTIYGIIGIKVWIFKGEKI 210
>gi|21674992|ref|NP_663057.1| 30S ribosomal protein S3 [Chlorobium tepidum TLS]
gi|27734498|sp|Q8KAH8|RS3_CHLTE RecName: Full=30S ribosomal protein S3
gi|21648225|gb|AAM73399.1| ribosomal protein S3 [Chlorobium tepidum TLS]
Length = 253
Score = 225 bits (574), Expect = 4e-57, Method: Composition-based stats.
Identities = 104/210 (49%), Positives = 144/210 (68%), Gaps = 2/210 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ--AGVAKILIE 58
MGQK+NP FRLG+ W SRW+ G + +D IR Y+ LK+ AG+AKI+IE
Sbjct: 1 MGQKVNPTGFRLGIIKDWTSRWYDDGPVIAEKIKQDQVIRNYVHARLKKEKAGIAKIVIE 60
Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118
RT K+ +I +Y+ARPG I+G KG +I + ++L+ +T E+ + V EV KPEI A LI +
Sbjct: 61 RTTKHIKINIYAARPGAIVGHKGEEINNLSQELTRITGKEVKIDVIEVIKPEIEAQLIGE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
+IA QLE RV FRRAMK A+Q AMR GA+GV++ +GRL GAE++R E Y EG++PL TL
Sbjct: 121 NIAYQLENRVSFRRAMKMAIQQAMRAGAEGVRIRCAGRLGGAEIARAEQYKEGKIPLHTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208
RA++DY + A T G+ GIKV+V + +
Sbjct: 181 RANVDYASVTAHTIAGAIGIKVWVYKGEVL 210
>gi|311062988|gb|ADP65742.1| ribosomal protein S3 [Gaillardia yellows phytoplasma]
gi|311062992|gb|ADP65745.1| ribosomal protein S3 [Strawberry green petal phytoplasma SGP]
Length = 252
Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 133/215 (61%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+WF E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWFVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
+ I V++A+PG+IIGK G K+ K+ +T +++L+V EV + A LI
Sbjct: 61 KEKNKNSITISVHTAKPGVIIGKDGDTRNKLVAKIKELTQKDVNLNVLEVKNSDKIALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIK+++ + +
Sbjct: 181 TLRADIDYAAVEAHTNYGVLGIKIWIFHGEVLPGQ 215
>gi|313199740|ref|YP_004021354.1| ribosomal protein S3 [Theobroma cacao]
gi|309321304|gb|ADO64847.1| ribosomal protein S3 [Theobroma cacao]
gi|328924817|gb|ADO64928.2| ribosomal protein S3 [Theobroma cacao]
Length = 218
Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 76/218 (34%), Positives = 132/218 (60%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + +S WFA+ Y L ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFAQPKNYSEGLQEDKKIRDCIKNYVQKNLRISSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I+Y P L+I + IE+++ +K N N ++++++ + P
Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKLLIEDRPRKIEELQMNVQKELNCMNRKLNIAITRIANP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ ++A+ IA QL+ RV FR+AMK+A++ + G+++ +GR++G E++R E
Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+ A IDY + T YG GIK+++ + +E
Sbjct: 181 EGRVPLQTIGAKIDYCSYRVRTIYGVLGIKIWIFIDEE 218
>gi|37731281|gb|AAO74962.1| ribosomal protein S3 [Aster yellows phytoplasma]
Length = 252
Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKVALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A++LE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEKLENRMFFRRVQKMAIQKAIKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|34500952|ref|NP_904137.1| ribosomal protein S3 [Amborella trichopoda]
gi|68052970|sp|Q70XX2|RR3_AMBTC RecName: Full=30S ribosomal protein S3, chloroplastic
gi|34481667|emb|CAD45145.1| ribosomal protein S3 [Amborella trichopoda]
Length = 218
Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 77/218 (35%), Positives = 129/218 (59%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + S WFA+ +Y L ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHRSLWFAQPKDYSRNLQEDEKIRDCIKNYVQKHMRISSGFQGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK---IRKKLSNMTNSEIHLSVNEVPKP 109
A++ I++ ++ +Y L+I IE+ +K N N +++++ + +P
Sbjct: 61 ARLGIQKRIDLIQVTIYIGSSNLLIEGPTRGIEELRTDVQKKLNSMNRRLNITITRIARP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
++A+ IA QL+ RV FR+AMK+A++ A + G++V +GRLNG E++R E
Sbjct: 121 YEQPNILAEYIALQLKNRVSFRKAMKKAIELAEQANTKGIRVQIAGRLNGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPL T+RA IDY + + +T YG GIK+++ + +E
Sbjct: 181 EGRVPLHTIRAKIDYCSYMVQTIYGVLGIKIWIFVDEE 218
>gi|282898351|ref|ZP_06306342.1| ribosomal protein S3 [Raphidiopsis brookii D9]
gi|281196882|gb|EFA71787.1| ribosomal protein S3 [Raphidiopsis brookii D9]
Length = 251
Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 99/222 (44%), Positives = 141/222 (63%), Gaps = 7/222 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL-----KQAGVAKI 55
MGQKI+P+ FRLG+ S WFA Y LL ED K+R+Y++ L AG+++I
Sbjct: 1 MGQKIHPVGFRLGITQEHQSLWFAVPGRYPELLQEDHKLRQYIEQKLGRNAQNNAGLSEI 60
Query: 56 LIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINA 113
IER + + +ARPG+++G+ G IE +R L + ++ ++ ++V EV K + +A
Sbjct: 61 HIERKADQVDLELRTARPGVVVGRGGQGIEALRTGLQQLLGSHRQVRINVVEVQKVDADA 120
Query: 114 TLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV 173
LIA+ IAQQLERRV FRR +++A+Q A R G G+KV SGRLNGAE++RTE EGRV
Sbjct: 121 YLIAEYIAQQLERRVSFRRVVRQAIQRAQRAGVQGIKVQVSGRLNGAEIARTEWTREGRV 180
Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
PL TLRA IDY A+T YG G+KV+V + + + +
Sbjct: 181 PLHTLRADIDYSYCTAQTVYGILGVKVWVFKGEIIPGQEDIV 222
>gi|153012175|ref|YP_001381691.1| ribosomal protein S3 [Medicago truncatula]
Length = 214
Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 77/212 (36%), Positives = 127/212 (59%), Gaps = 7/212 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA----GVAKIL 56
MGQKI+P+ FRLG +S WFA+ Y L ED IR+ ++ ++++ G+ +I
Sbjct: 1 MGQKIHPLGFRLGTTQNHDSIWFAQPRNYSENLKEDKIIRDCIKNYIQKTPGVEGIGRIK 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINA 113
I++T ++I+Y P L+ K IE+++ + N +I+++ +P +
Sbjct: 61 IKKTIDQIQVIIYMVLPTLLTEGKPRRIEELQTNVQKKLNCVTRKINITSTRIPNAYSDP 120
Query: 114 TLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV 173
++A+ IA QL+ R+ FR+A+K+A++ A + G GV+V +GR++G E++R E EGRV
Sbjct: 121 NILAEFIAGQLKNRISFRKAIKKAIELAEQAGTKGVQVQIAGRIDGKEIARVEWIREGRV 180
Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
PLQT+RA IDY + T YG GIKV++ L
Sbjct: 181 PLQTIRAKIDYCSYPVRTIYGVLGIKVWIFLN 212
>gi|85057796|ref|YP_456712.1| 30S ribosomal protein S3 [Aster yellows witches'-broom phytoplasma
AYWB]
gi|123738895|sp|Q2NIW0|RS3_AYWBP RecName: Full=30S ribosomal protein S3
gi|37731212|gb|AAO74917.1| ribosomal protein S3 [Aster yellows phytoplasma]
gi|37731216|gb|AAO74920.1| ribosomal protein S3 [Aster yellows phytoplasma]
gi|37731222|gb|AAO74923.1| ribosomal protein S3 [Aster yellows phytoplasma]
gi|37731226|gb|AAO74926.1| ribosomal protein S3 [Aster yellows phytoplasma]
gi|37731230|gb|AAO74929.1| ribosomal protein S3 [Aster yellows phytoplasma]
gi|37731234|gb|AAO74932.1| ribosomal protein S3 [Aster yellows phytoplasma]
gi|37731240|gb|AAO74935.1| ribosomal protein S3 [Aster yellows phytoplasma]
gi|37731244|gb|AAO74938.1| ribosomal protein S3 [Aster yellows phytoplasma]
gi|37731257|gb|AAO74944.1| ribosomal protein S3 [Aster yellows phytoplasma]
gi|37731261|gb|AAO74947.1| ribosomal protein S3 [Aster yellows phytoplasma]
gi|37731277|gb|AAO74959.1| ribosomal protein S3 [Aster yellows phytoplasma]
gi|37731285|gb|AAO74965.1| ribosomal protein S3 [Aster yellows phytoplasma]
gi|37731289|gb|AAO74968.1| ribosomal protein S3 [Aster yellows phytoplasma]
gi|84789901|gb|ABC65633.1| SSU ribosomal protein S3P [Aster yellows witches'-broom phytoplasma
AYWB]
gi|297787447|gb|ADI52867.1| ribosomal protein S3 [Onion proliferation phytoplasma]
Length = 252
Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKVALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A++LE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEKLENRMFFRRVQKMAIQKAIKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|290487132|gb|ADD29950.1| ribosomal protein S3 [Trochodendron aralioides]
Length = 218
Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 79/218 (36%), Positives = 132/218 (60%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG +S WFA+ Y L ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFAQPKSYSEGLQEDKKIRDCIKNYVQKNMRISSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I+Y P L+I + IE+++ +K N N ++++++ + KP
Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKLLIEGRPRGIEELQINVQKDFNSVNRKLNIAITRIAKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E
Sbjct: 121 YGQPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY + T YG GIK+++ + +E
Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFVDEE 218
>gi|163752911|ref|ZP_02160035.1| putative 30S ribosomal protein S3 [Kordia algicida OT-1]
gi|161326643|gb|EDP97968.1| putative 30S ribosomal protein S3 [Kordia algicida OT-1]
Length = 240
Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 100/216 (46%), Positives = 149/216 (68%), Gaps = 2/216 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ W S W+ G++YG L ED KIR+Y+ L +A V++++IERT
Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDKLAEDDKIRKYIHARLSKASVSRVIIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + + +ARPG+IIGK G +++K++++L +T E+ +++ E+ +PE++A L+A SI
Sbjct: 60 LKLVTVTITTARPGIIIGKGGQEVDKLKEELKKITGKEVQINIFEIKRPELDANLVAASI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E R+ +RRA+K A+ +AMR A+G+KV SGRLNGAE++R+E Y +GR+PL T RA
Sbjct: 120 ARQIENRISYRRAIKMAIAAAMRMNAEGIKVQISGRLNGAEMARSESYKDGRIPLSTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
IDY A T YG G+KV+V + EV P
Sbjct: 180 DIDYALHEAHTTYGRLGVKVWVM-KGEVYGKRELSP 214
>gi|157363448|ref|YP_001470215.1| ribosomal protein S3 [Thermotoga lettingae TMO]
gi|189045342|sp|A8F4R7|RS3_THELT RecName: Full=30S ribosomal protein S3
gi|157314052|gb|ABV33151.1| ribosomal protein S3 [Thermotoga lettingae TMO]
Length = 209
Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 100/207 (48%), Positives = 143/207 (69%), Gaps = 2/207 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLGV+ W +RWF Y L ED +IR+ ++ QAG++++ IER
Sbjct: 1 MGQKVHPRGFRLGVSADWQTRWF-NEKNYATWLKEDEEIRKVVKNAYSQAGISEVFIERP 59
Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
I + +ARPG+IIGKKG +I K+R+ L N + ++V E+ PE +A L+A++
Sbjct: 60 DNESVTITIKTARPGVIIGKKGAEIGKLREDLEKELNRRVIVNVEEIKTPETDAQLVAEN 119
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA ++E+R ++RAMKRA+ A+R GA GVKV+ SGRL GAE++R E YL GR+PLQT+R
Sbjct: 120 IAGRIEKRASYKRAMKRALSDALRKGATGVKVMVSGRLAGAEIARREWYLRGRLPLQTVR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRD 206
A +DYGTA A+T YG+ GIKV++ D
Sbjct: 180 AVVDYGTATAKTKYGTIGIKVWIYKGD 206
>gi|330850668|ref|YP_004376549.1| ribosomal protein S3 [Ptilidium pulcherrimum]
gi|302024797|gb|ADK89643.1| ribosomal protein S3 [Ptilidium pulcherrimum]
Length = 217
Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats.
Identities = 82/217 (37%), Positives = 130/217 (59%), Gaps = 11/217 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG+ + +S WFA+ Y L D KIR ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGITQSHHSYWFAKPKNYSKLFEGDKKIRNCIEFYVRKHIRNSSNYGGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK---IRKKLSNMTNSEIHLSVNEVPKP 109
A++ I+R ++ +Y+ P L++ +G IE+ + + N N + L++ E+ KP
Sbjct: 61 ARVEIQRKTDLIQVEIYTGFPALLVENRGRGIEQLKTDVQNVLNPVNRRLRLTLVEIAKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
++A+ IA QLE RV FRR M++A++ A + G+K+ +GRLNGAE++R E
Sbjct: 121 YEEPNILAEYIALQLESRVAFRRTMRKAIELAKKGNIGGIKIQIAGRLNGAEIARVEWAR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
EGRVPLQT+RA I+Y A+T YG GIKV++ +
Sbjct: 181 EGRVPLQTIRARINYCYYAAQTIYGVLGIKVWIFQNE 217
>gi|37731208|gb|AAO74914.1| ribosomal protein S3 [Aster yellows phytoplasma]
Length = 252
Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKVALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A++LE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEKLENRMFFRRVQKMAIQKAIKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAAXEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|332170565|gb|AEE19820.1| ribosomal protein S3 [Krokinobacter diaphorus 4H-3-7-5]
Length = 240
Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats.
Identities = 99/216 (45%), Positives = 149/216 (68%), Gaps = 2/216 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ W S W+ G++YG L ED KIR Y+ L +A V++++IERT
Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDKLAEDDKIRRYIHARLSKASVSRVIIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + + +ARPG+IIGK G +++K++++L +T E+ ++++E+ +PE++A L+ QS+
Sbjct: 60 LKLVTVTITTARPGIIIGKGGQEVDKLKEELKKLTGKEVQINIHEIKRPELDAFLVGQSV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E R+ FRRA+K A+ +AMR A+G+K+ SGRLNGAE++R+E Y +GR+PL T RA
Sbjct: 120 ARQIEGRISFRRAIKMAIAAAMRMNAEGIKIQISGRLNGAEMARSESYKDGRIPLSTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
IDY A T YG GIKV++ + EV P
Sbjct: 180 DIDYALVEAHTTYGRLGIKVWIM-KGEVYGKRELSP 214
>gi|147883190|gb|ABQ51889.1| ribosomal protein S3 [Salinibacter ruber]
gi|147883192|gb|ABQ51890.1| ribosomal protein S3 [Salinibacter ruber]
gi|147883196|gb|ABQ51892.1| ribosomal protein S3 [Salinibacter ruber]
gi|147883198|gb|ABQ51893.1| ribosomal protein S3 [Salinibacter ruber]
gi|147883200|gb|ABQ51894.1| ribosomal protein S3 [Salinibacter ruber]
gi|147883202|gb|ABQ51895.1| ribosomal protein S3 [Salinibacter ruber]
gi|147883204|gb|ABQ51896.1| ribosomal protein S3 [Salinibacter ruber]
Length = 219
Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats.
Identities = 93/220 (42%), Positives = 154/220 (70%), Gaps = 2/220 (0%)
Query: 8 ILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRII 67
I FRLG W+S W++ + L ED ++R YL LK+AG+++ +IERT + +
Sbjct: 1 IGFRLGAIRGWDSNWYSET-NFQDKLVEDEELRRYLHTRLKRAGLSRAVIERTPERVILT 59
Query: 68 VYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERR 127
++++RPG++IG+ G+++EK++ +L +T +I ++++E+ +PE++ATL+A++I QQLE R
Sbjct: 60 LHTSRPGVVIGRGGSEVEKLKGELETLTGKDIQINISEIKRPELDATLVAKNIVQQLEGR 119
Query: 128 VVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTA 187
+ FRRAMK+A+Q+AMR GA+GV++ A+GRL GAE+ RTE Y+EGRVPL T+RA ID+
Sbjct: 120 ISFRRAMKQAMQAAMRMGAEGVRIRAAGRLGGAEMGRTEEYMEGRVPLHTIRADIDFAQE 179
Query: 188 VAETAYGSCGIKVYVSLRDEVS-DSDSTIPAAEHRVVEKD 226
A T YG+ G+KV++ + + S A+ R +++
Sbjct: 180 TALTIYGTIGVKVWIHRGEILGKPDLSPNVQAQQRKMKES 219
>gi|89891144|ref|ZP_01202652.1| 30S ribosomal protein S3 (rpsC) [Flavobacteria bacterium BBFL7]
gi|89516788|gb|EAS19447.1| 30S ribosomal protein S3 (rpsC) [Flavobacteria bacterium BBFL7]
Length = 240
Score = 225 bits (573), Expect = 5e-57, Method: Composition-based stats.
Identities = 94/216 (43%), Positives = 149/216 (68%), Gaps = 2/216 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ W S W+ G++YG L ED KIR+Y+ L +A V++++IERT
Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDKLAEDDKIRKYIHARLSKASVSRVIIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + + +ARPG+IIGK G ++++++++L +T ++ ++++E+ +PE++A L+ S+
Sbjct: 60 LKLVTVTITTARPGIIIGKGGQEVDRLKEELKKITGKDVQINIHEIKRPELDAFLVGASV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E R+ +RRA+K A+ +AMR A+G+K+ SGRLNGAE++R+E Y +GR+PL T RA
Sbjct: 120 ARQIENRISYRRAIKMAIAAAMRMNAEGIKIQISGRLNGAEMARSESYKDGRIPLSTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
IDY A T YG G+KV++ + EV P
Sbjct: 180 DIDYALVEAHTTYGRLGVKVWIM-KGEVYGKRELSP 214
>gi|290487122|gb|ADD29945.1| ribosomal protein S3 [Liquidambar styraciflua]
Length = 218
Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats.
Identities = 78/218 (35%), Positives = 132/218 (60%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG +S WFA+ Y L ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFAQPKNYSEGLQEDKKIRDCIKNYVQKNMRISSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I+Y P L++ + IE+++ +K N N ++++++ + KP
Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKLLMEGRPRRIEELQMLVQKEFNCVNRKLNIAITRIAKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E
Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY + T YG GIK+++ + E
Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFVDKE 218
>gi|139389680|ref|YP_001123237.1| ribosomal protein S3 [Arabis hirsuta]
gi|152060529|sp|A4QK56|RR3_ARAHI RecName: Full=30S ribosomal protein S3, chloroplastic
gi|134286435|dbj|BAF50061.1| ribosomal protein S3 [Arabis hirsuta]
Length = 218
Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats.
Identities = 77/218 (35%), Positives = 130/218 (59%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + +S WFA+ +Y L ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHHSVWFAQPKKYSEGLEEDKKIRDCIKNYVQKNIRISSGMEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGT---DIEKIRKKLSNMTNSEIHLSVNEVPKP 109
A+I I++ +II+Y P L+I K +++ +K N N ++++++ + P
Sbjct: 61 ARIEIQKRIDLIQIIIYMGFPKLLIEDKPRRVEELQMNVQKELNCVNRKLNIAITRISNP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E
Sbjct: 121 YGQPNILAEFIAGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+ A IDY + T YG GIK+++ + +E
Sbjct: 181 EGRVPLQTIDAKIDYCSYTVRTIYGVLGIKIWIFVDEE 218
>gi|37731253|gb|AAO74941.1| ribosomal protein S3 [Aster yellows phytoplasma]
Length = 252
Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 133/215 (61%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERX 60
Query: 61 HKNCR----IIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
+ + I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKVALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A++LE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEKLENRMFFRRVQKMAIQKAIKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|17231701|ref|NP_488249.1| 30S ribosomal protein S3 [Nostoc sp. PCC 7120]
gi|27734518|sp|Q8YPI5|RS3_ANASP RecName: Full=30S ribosomal protein S3
gi|17133344|dbj|BAB75908.1| 30S ribosomal protein S3 [Nostoc sp. PCC 7120]
Length = 260
Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats.
Identities = 102/219 (46%), Positives = 141/219 (64%), Gaps = 7/219 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL-----KQAGVAKI 55
MGQKI+P+ FRLG+ SRWFA S Y LL ED K+R+Y++ L AG++++
Sbjct: 1 MGQKIHPVGFRLGITQEHQSRWFAEPSRYPELLQEDHKLRQYIEQKLGRLAQNNAGISEV 60
Query: 56 LIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINA 113
IER + V +ARPG+++G+ G IE +R L + N +I ++V EV + + +A
Sbjct: 61 RIERKADQIDLEVRTARPGVVVGRGGQGIEALRTGLQTLLGGNRQIRINVVEVQRVDADA 120
Query: 114 TLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV 173
LIA+ IAQQLERRV FRR +++A+Q A + G G+KV SGRLNGAE++RTE EGRV
Sbjct: 121 YLIAEFIAQQLERRVSFRRVVRQAIQRAQKAGIQGIKVQVSGRLNGAEIARTEWTREGRV 180
Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
PL TLRA IDY A+T YG GIKV+V + + +
Sbjct: 181 PLHTLRADIDYSYCTAKTVYGILGIKVWVFKGEIIPGQE 219
>gi|32475064|ref|NP_868058.1| 30S ribosomal protein S3 [Rhodopirellula baltica SH 1]
gi|61215693|sp|Q7UN14|RS3_RHOBA RecName: Full=30S ribosomal protein S3
gi|32445604|emb|CAD75605.1| 30S ribosomal protein S3 [Rhodopirellula baltica SH 1]
gi|327540584|gb|EGF27159.1| 30S ribosomal protein S3 [Rhodopirellula baltica WH47]
Length = 236
Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats.
Identities = 103/232 (44%), Positives = 143/232 (61%), Gaps = 8/232 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCH-----LKQAGVAKI 55
MGQK+NPI FR GV W SRW+A ++ LL ED KIRE++ H K AG+ +I
Sbjct: 1 MGQKVNPIAFRTGVTRGWGSRWYASKQDFADLLVEDRKIREFITKHPKKSQYKSAGIDRI 60
Query: 56 LIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATL 115
IERT R+++Y ARPGLIIGKKG +IE ++ +L N+ I+L V EV +PE+ A L
Sbjct: 61 EIERTRDEVRVMLYVARPGLIIGKKGQEIEILQAELQNLVGRRINLKVEEVGRPELQAQL 120
Query: 116 IAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPL 175
+A+ I+QQL +R FRR MKR ++ M GA G+K+ +GRL GAE++R E G +PL
Sbjct: 121 VAEDISQQLAKRSSFRRTMKRMLEQTMDAGAKGIKIQMAGRLGGAEMARREKQSAGSIPL 180
Query: 176 QTLRAHIDYGTAVAETAYGSCGIKVYVS---LRDEVSDSDSTIPAAEHRVVE 224
TL+A IDYG A T G GI+V+++ D+ +D+ A +
Sbjct: 181 STLQAKIDYGFTEAMTPQGHIGIQVWINQGTYGDDNDGADAQTGQASKKPKR 232
>gi|204304432|gb|ACH99108.1| ribosomal protein S3 [Willow yellow phytoplasma]
Length = 252
Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats.
Identities = 97/227 (42%), Positives = 138/227 (60%), Gaps = 7/227 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+WF E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWFVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
+ I V++A+PG+IIGK G K+ K+ +T +++L+V EV + A LI
Sbjct: 61 KEKNKNSITISVHTAKPGVIIGKDGDTRNKLVAKIKELTQKDVNLNVLEVKSSDKIALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS---DSTIPAAEH 220
TLRA IDY A T YG GIK+++ + + D+ IP A
Sbjct: 181 TLRADIDYAAVEAHTNYGVLGIKIWIFHGEVLPGQTILDTRIPFASQ 227
>gi|160902250|ref|YP_001567831.1| ribosomal protein S3 [Petrotoga mobilis SJ95]
gi|160359894|gb|ABX31508.1| ribosomal protein S3 [Petrotoga mobilis SJ95]
Length = 210
Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats.
Identities = 103/210 (49%), Positives = 144/210 (68%), Gaps = 3/210 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K++P FRLG N TW S WF Y LHED KIR+Y++ + + AG+++ILIER
Sbjct: 1 MGSKVHPNGFRLGNNKTWKSVWF-NEKNYSDYLHEDEKIRDYIKSNYEAAGISEILIERP 59
Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQ 118
+ RI +Y AR G++IG+KG +++KIR L N+ I + EV P + A LIA+
Sbjct: 60 SDSSIRIDIYGARLGILIGRKGAEMKKIRDDLKNIVGDKNIKVYAEEVKNPYVVAQLIAE 119
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
++ QL+RRV + AMKRA+ +AMR GA GVK++ SGRL GAE++RTE Y+EGR+PLQTL
Sbjct: 120 DVSGQLQRRVSHKVAMKRAITNAMRRGAKGVKIMVSGRLGGAEIARTEWYMEGRLPLQTL 179
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208
R++IDY ++T YG+ GIKV+V D +
Sbjct: 180 RSNIDYAVVHSQTKYGTIGIKVWVYHGDTL 209
>gi|139389839|ref|YP_001123500.1| ribosomal protein S3 [Crucihimalaya wallichii]
gi|152060533|sp|A4QKW9|RR3_CRUWA RecName: Full=30S ribosomal protein S3, chloroplastic
gi|134286701|dbj|BAF50324.1| ribosomal protein S3 [Crucihimalaya wallichii]
Length = 218
Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats.
Identities = 76/217 (35%), Positives = 131/217 (60%), Gaps = 11/217 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + +S WFA+ +Y L ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFAQPKKYSEGLEEDKKIRDCIKNYVQKNIRISSGMEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGT---DIEKIRKKLSNMTNSEIHLSVNEVPKP 109
A+I I++ +II+Y P L+I K +++ +K N N ++++++ + P
Sbjct: 61 ARIEIQKRIDLIQIIIYMGFPKLLIEDKPRRVEELQMNVQKELNCVNKKLNIAITRISNP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E
Sbjct: 121 YGDPNILAEFIAGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
EGRVPLQT+ A IDY ++ T YG GIK+++ + +
Sbjct: 181 EGRVPLQTIEAKIDYCSSTVRTIYGVLGIKIWIFVDE 217
>gi|149371635|ref|ZP_01891051.1| 30S ribosomal protein S3 [unidentified eubacterium SCB49]
gi|149355262|gb|EDM43822.1| 30S ribosomal protein S3 [unidentified eubacterium SCB49]
Length = 240
Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats.
Identities = 97/216 (44%), Positives = 149/216 (68%), Gaps = 2/216 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ W S W+ G++YG L ED KIR+Y+ L +A V++++IERT
Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDKLAEDDKIRKYIHARLSKASVSRVIIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + + +ARPG+IIGK G +++K++++L +T E+ ++++E+ +PE++A L+ SI
Sbjct: 60 LKLVTVTITTARPGIIIGKGGQEVDKLKEELKKITGKEVQINIHEIKRPEMDAHLVGSSI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E R+ +RRA+K A+ +A+R A+G+K+ SGRLNGAE++R+E Y EGR+PL T RA
Sbjct: 120 ARQIENRISYRRAIKMAIAAAIRMNAEGIKIQISGRLNGAEMARSESYKEGRIPLSTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
IDY A T YG G+KV++ + EV P
Sbjct: 180 DIDYALVEAHTTYGRLGVKVWIM-KGEVYGKRELSP 214
>gi|282899958|ref|ZP_06307919.1| ribosomal protein S3 [Cylindrospermopsis raciborskii CS-505]
gi|281195228|gb|EFA70164.1| ribosomal protein S3 [Cylindrospermopsis raciborskii CS-505]
Length = 251
Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats.
Identities = 100/222 (45%), Positives = 141/222 (63%), Gaps = 7/222 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL-----KQAGVAKI 55
MGQKI+P+ FRLG+ S WFA Y LL ED K+R+Y++ L AG+++I
Sbjct: 1 MGQKIHPVGFRLGITQEHQSLWFAVPGRYPELLQEDHKLRQYIEQKLGRNAQNNAGLSEI 60
Query: 56 LIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINA 113
IER + + +ARPG+++G+ G IE +R L + ++ ++ ++V EV K + +A
Sbjct: 61 HIERKADQVDLELRTARPGVVVGRGGQGIEALRTGLQQLLGSHRQVRINVVEVQKVDADA 120
Query: 114 TLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV 173
LIA+ IAQQLERRV FRR +++A+Q A R G G+KV SGRLNGAE++RTE EGRV
Sbjct: 121 YLIAEYIAQQLERRVSFRRVVRQAIQRAQRAGVQGIKVQVSGRLNGAEIARTEWTREGRV 180
Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
PL TLRA IDY A+T YG GIKV+V + + + +
Sbjct: 181 PLHTLRADIDYSYCTAQTVYGILGIKVWVFKGEIIPGQEDIV 222
>gi|139388132|ref|YP_001123324.1| ribosomal protein S3 [Barbarea verna]
gi|152060530|sp|A4QKE3|RR3_BARVE RecName: Full=30S ribosomal protein S3, chloroplastic
gi|134286523|dbj|BAF50148.1| ribosomal protein S3 [Barbarea verna]
Length = 218
Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats.
Identities = 76/217 (35%), Positives = 129/217 (59%), Gaps = 11/217 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + +S WFA+ +Y L ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFAQPKKYSEGLEEDKKIRDCIKNYVQKNIRISSGMEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGT---DIEKIRKKLSNMTNSEIHLSVNEVPKP 109
A+I I++ +II+Y P L+I K ++ +K N N ++++++ + P
Sbjct: 61 ARIEIQKRIDLIQIIIYMGFPKLLIEDKPRRVEELRMNVQKELNCVNRKLNIAITRISNP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E
Sbjct: 121 YGDPNILAEFIAGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
EGRVPLQT+ A IDY + T YG GIK+++ + +
Sbjct: 181 EGRVPLQTIEAKIDYCSYTVRTIYGVLGIKIWIFVDE 217
>gi|37731265|gb|AAO74950.1| ribosomal protein S3 [Aster yellows phytoplasma]
Length = 252
Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats.
Identities = 92/215 (42%), Positives = 130/215 (60%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++A+PG+IIGK G K+ K +T +++L+V EV + A LI
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKPKELTQKDVNLNVLEVKNSDKVALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A++LE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEKLENRMFFRRVQKMAIQKAIKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|290487118|gb|ADD29943.1| ribosomal protein S3 [Gunnera manicata]
Length = 218
Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats.
Identities = 78/218 (35%), Positives = 132/218 (60%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFAQPKNYSEGLQEDQKIRNCIKNYIQKNIKISSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I+Y P L+I + +E+++ +K N N ++++++ + KP
Sbjct: 61 ARIEIKKRIDLIQVIIYMGFPKLLIEGRPQGVEELQINVQKEFNSVNKKLNIAITRIEKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
N ++A+ IA QL+ RV FR+A+K+A++ + G++V +GR++G E++R E
Sbjct: 121 YGNPNILAEFIAGQLKNRVSFRKAIKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY + T YG GIK+++ + +E
Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFVDEE 218
>gi|30468188|ref|NP_849075.1| ribosomal protein S3 [Cyanidioschyzon merolae strain 10D]
gi|34924922|sp|Q85FV7|RR3_CYAME RecName: Full=30S ribosomal protein S3, chloroplastic
gi|30409288|dbj|BAC76237.1| 30S ribosomal protein S3 [Cyanidioschyzon merolae strain 10D]
Length = 205
Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats.
Identities = 85/206 (41%), Positives = 134/206 (65%), Gaps = 3/206 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +P+ FRLG+ T S WFA +Y +L ED IR+ L+ ++ +AG+A+I I R
Sbjct: 1 MGQKTHPVGFRLGITHTHQSHWFAH--QYSKILQEDHAIRQLLRDYVLKAGIARIHILRK 58
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEK-IRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
+ ++ ARPG+++G+ G ++ + + + +S+ EV P+ NA L+AQ
Sbjct: 59 SHQIELELHLARPGILVGRSGLGLDNLRTQLQTKWPHLTWRISLVEVSNPDANAVLLAQW 118
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
+AQQLE+R+ FRRA+++A+ A + G G+K+ SGRLNGAE++R+E G++PLQTLR
Sbjct: 119 LAQQLEKRIAFRRAIRQAMARAQKVGVKGIKIQVSGRLNGAEIARSEWVRHGQIPLQTLR 178
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLR 205
A I+Y A A T YG G+KV+++ +
Sbjct: 179 APINYAIANAYTTYGVIGVKVWINPK 204
>gi|315283841|ref|ZP_07871902.1| ribosomal protein S3 [Listeria marthii FSL S4-120]
gi|313612515|gb|EFR86596.1| ribosomal protein S3 [Listeria marthii FSL S4-120]
Length = 202
Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats.
Identities = 85/203 (41%), Positives = 135/203 (66%), Gaps = 1/203 (0%)
Query: 17 TWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLI 76
W+S+W+A +Y LHEDL+IR+Y+ L A V+++ IER I +++A+PG++
Sbjct: 1 DWDSKWYAE-KDYADFLHEDLRIRDYVAKRLSDASVSRVEIERAANRVNITIHTAKPGMV 59
Query: 77 IGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKR 136
IGK G+++E +RK L+ +T +H+++ E+ + +++A L+A++IA+QLE RV FRRA K+
Sbjct: 60 IGKGGSEVEALRKNLNELTQKRVHINIVEIKRADLDAKLVAENIARQLEGRVSFRRAQKQ 119
Query: 137 AVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196
A+Q MR GA G+K SGRL GA+++R E Y EG VPL TLRA IDY A+T YG
Sbjct: 120 AIQRTMRAGAKGIKTQVSGRLGGADIARAEHYSEGTVPLHTLRADIDYAWEEADTTYGKL 179
Query: 197 GIKVYVSLRDEVSDSDSTIPAAE 219
G+KV++ + + + + +
Sbjct: 180 GVKVWIYRGEVLPTKKNNVEGGK 202
>gi|283780380|ref|YP_003371135.1| 30S ribosomal protein S3 [Pirellula staleyi DSM 6068]
gi|283438833|gb|ADB17275.1| ribosomal protein S3 [Pirellula staleyi DSM 6068]
Length = 237
Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats.
Identities = 103/233 (44%), Positives = 147/233 (63%), Gaps = 9/233 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCH-----LKQAGVAKI 55
MGQK++PI FR G+ W SRW+A EY LL ED KIRE+++ H + AG+ +I
Sbjct: 1 MGQKVHPIGFRTGIMIGWKSRWYASKKEYANLLLEDKKIREFVKNHPSKTQYRSAGIDRI 60
Query: 56 LIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATL 115
IERT +++++ ARPG+IIGKKG ++E ++++L N+T I+L + E+ +PEI A L
Sbjct: 61 EIERTRDEVKVVLFVARPGVIIGKKGQEVEILQEELQNLTGRRINLKIEEIARPEIQAQL 120
Query: 116 IAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPL 175
IA+ IAQQL +R FRR +KRA++ M GA GVK+ +GRL GAE++R E G +PL
Sbjct: 121 IAEEIAQQLSKRASFRRTLKRAIEQTMDAGAKGVKIQLAGRLGGAEMARCEKATAGSLPL 180
Query: 176 QTLRAHIDYGTAVAETAYGSCGIKVYV----SLRDEVSDSDSTIPAAEHRVVE 224
TLRA IDYG A TA G G++V+V D + +D+ A +
Sbjct: 181 STLRAKIDYGFTEAMTAQGHIGVQVWVNQGMFEGDASNGADAQTSEAPKKPKR 233
>gi|38426848|gb|AAR20470.1| ribosomal protein S3 [Candidatus Phytoplasma australiense]
Length = 235
Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats.
Identities = 88/215 (40%), Positives = 130/215 (60%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW+S+W E AL+ ED IR+ + K++ +++I I+R
Sbjct: 1 MGQKTNPNGLRLGIIRTWDSQWCVNDKEIPALIKEDFLIRQLINNFSKRSSISQIEIQRL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
T I +++ L++ K KI+ +L +T +I+L++ EV P+ A L+
Sbjct: 61 KEKTKNRITITIHTPNQELLLAKMVKLRNKIQAQLKKLTQKDINLNILEVKNPDKTAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A + GA G+KV+ SGRLNG E++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMKFRRVQKMAIQKAFKAGAKGIKVLISGRLNGDEIARSERHDEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAALEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|186684504|ref|YP_001867700.1| 30S ribosomal protein S3 [Nostoc punctiforme PCC 73102]
gi|226697737|sp|B2ITP9|RS3_NOSP7 RecName: Full=30S ribosomal protein S3
gi|186466956|gb|ACC82757.1| ribosomal protein S3 [Nostoc punctiforme PCC 73102]
Length = 260
Score = 224 bits (571), Expect = 8e-57, Method: Composition-based stats.
Identities = 100/220 (45%), Positives = 141/220 (64%), Gaps = 7/220 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL-----KQAGVAKI 55
MGQKI+P+ FRLG+ SRWFA Y LL ED K+R+Y++ L AG++++
Sbjct: 1 MGQKIHPVGFRLGITHEHQSRWFAVPDRYPELLQEDYKLRQYIEQKLGRLAQNNAGISEV 60
Query: 56 LIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINA 113
IER + V +ARPG+++G+ G IE +R L + +N +I ++V EV + + +A
Sbjct: 61 RIERKADQIDLEVRTARPGVVVGRGGQGIESLRTGLQGLLGSNRQIRINVVEVQRVDADA 120
Query: 114 TLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV 173
LIA+ IAQQLERRV FRR +++++Q A R G G+K+ SGRLNGAE++RTE EGRV
Sbjct: 121 YLIAEYIAQQLERRVSFRRVVRQSIQRAQRAGVQGIKIQVSGRLNGAEIARTEWTREGRV 180
Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
PL TLRA IDY A+T YG GIKV+V + + +
Sbjct: 181 PLHTLRADIDYSYCTAKTVYGILGIKVWVFKGEIIPGQEP 220
>gi|218961427|ref|YP_001741202.1| 30S ribosomal subunit protein S3 [Candidatus Cloacamonas
acidaminovorans]
gi|167730084|emb|CAO80996.1| 30S ribosomal subunit protein S3 [Candidatus Cloacamonas
acidaminovorans]
Length = 215
Score = 224 bits (570), Expect = 9e-57, Method: Composition-based stats.
Identities = 100/214 (46%), Positives = 141/214 (65%), Gaps = 6/214 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P+L+RLGVN S WFA+G+ Y L ED+KIR Y++ L V+++ I R
Sbjct: 1 MGQKIHPVLYRLGVNKETESIWFAQGTSYVDFLQEDIKIRNYIRKRLSDKMVSRVQISRK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE------IHLSVNEVPKPEINAT 114
+ I +Y+ARPGL+IGKKG DI+K+R +L+ N + + +++ + K ++A
Sbjct: 61 TSSIIIDIYTARPGLVIGKKGEDIDKLRNELNVFINKDRKNPISVSINIEPIDKMWLDAR 120
Query: 115 LIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVP 174
L+AQ IA+QLE R+ FRRAMK A++ M+ A GVKV SGRL GAE++R+E Y +GR P
Sbjct: 121 LVAQEIARQLEERISFRRAMKMAIRYVMKENAQGVKVQVSGRLGGAEIARSERYKQGRTP 180
Query: 175 LQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208
L TLRA IDY A T YG G+KV++ D +
Sbjct: 181 LHTLRADIDYANVEANTTYGVIGVKVWIYKGDIL 214
>gi|38426836|gb|AAR20461.1| ribosomal protein S3 [Candidatus Phytoplasma australiense]
Length = 234
Score = 224 bits (570), Expect = 9e-57, Method: Composition-based stats.
Identities = 88/215 (40%), Positives = 130/215 (60%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW+S+W E AL+ ED IR+ + K++ +++I I+R
Sbjct: 1 MGQKTNPNGLRLGIIRTWDSQWCVNDKEIPALIKEDFLIRQLINNFSKRSSISQIEIQRL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
T I +++ L++ K KI+ +L +T +I+L++ EV P+ A L+
Sbjct: 61 KEKTKNRITITIHTPNQELLLAKMVKLRNKIQAQLKKLTQKDINLNILEVKNPDKTAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A + GA G+KV+ SGRLNG E++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMKFRRVQKMAIQKAFKAGAKGIKVLISGRLNGDEIARSERHDEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAALEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|315320571|ref|YP_004072628.1| 30S ribosomal protein S3 [Thalassiosira oceanica CCMP1005]
gi|283569044|gb|ADB27581.1| 30S ribosomal protein S3 [Thalassiosira oceanica CCMP1005]
Length = 214
Score = 224 bits (570), Expect = 9e-57, Method: Composition-based stats.
Identities = 87/212 (41%), Positives = 125/212 (58%), Gaps = 4/212 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +P+ FRLG+ S W+A Y LL ED +IR YL K A ++ + I R
Sbjct: 1 MGQKTHPLGFRLGITQEHRSSWYANFKHYSTLLKEDDQIRTYLNKFAKFASISNVHINRN 60
Query: 61 HKNCRI--IVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLI 116
+I + + RPG+++G G+ I+ + + N +I ++V EV NA+LI
Sbjct: 61 GLGDQIELNIETGRPGILVGDNGSQIKTLATNIKKFLPDNHQITINVIEVENINSNASLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
A + QQLE RV FRRA++ ++ A +G+K+ SGRLNGAE++R+E EGRVPLQ
Sbjct: 121 ADLVVQQLEDRVAFRRAIREGLKCAQDNQVNGIKIEVSGRLNGAEMARSEWIREGRVPLQ 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208
TLRA IDY T A T YG G+KV++ + +
Sbjct: 181 TLRADIDYATKEANTIYGVLGVKVWLFKNEIL 212
>gi|147883194|gb|ABQ51891.1| ribosomal protein S3 [Salinibacter ruber]
Length = 219
Score = 224 bits (570), Expect = 9e-57, Method: Composition-based stats.
Identities = 92/220 (41%), Positives = 153/220 (69%), Gaps = 2/220 (0%)
Query: 8 ILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRII 67
I FRLG W+S W++ + L ED ++R YL LK+AG+++ +IERT + +
Sbjct: 1 IGFRLGAIRGWDSNWYSET-NFQDKLVEDEELRRYLHTRLKRAGLSRAVIERTPERVILT 59
Query: 68 VYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERR 127
++++RPG++IG+ G+++EK++ +L +T +I ++++E+ +PE++ATL+A++I QQLE R
Sbjct: 60 LHTSRPGVVIGRGGSEVEKLKGELETLTGKDIQINISEIKRPELDATLVAKNIVQQLEGR 119
Query: 128 VVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTA 187
+ FRRAMK+A+Q+AMR GA+GV++ A+GRL GAE+ RTE Y+EGRVPL T+RA ID+
Sbjct: 120 ISFRRAMKQAMQAAMRMGAEGVRIRAAGRLGGAEMGRTEEYMEGRVPLHTIRADIDFAQE 179
Query: 188 VAETAYGSCGIKVYVSLRDEVS-DSDSTIPAAEHRVVEKD 226
T YG+ G+KV++ + + S A+ R +++
Sbjct: 180 TVLTIYGTIGVKVWIHRGEILGKPDLSPNVQAQQRKMKES 219
>gi|262400803|gb|ACY66292.1| ribosomal protein S3 [Brassica napus]
Length = 218
Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 79/218 (36%), Positives = 133/218 (61%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + +S WFA+ +Y L ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHHSIWFAQPKKYSEGLEEDKKIRDCIKNYVQKNIRISSGMEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ +II+Y P L+I K IE+++ +K N N ++++++ + P
Sbjct: 61 ARIEIQKRIDLIQIIIYMGFPKLLIEDKPRRIEELQMNVQKELNCVNRKLNIAITRISNP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E
Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+ A IDY + T YG GIK+++ + +E
Sbjct: 181 EGRVPLQTIEAKIDYCSYTVRTIYGVLGIKIWIFVDEE 218
>gi|260061903|ref|YP_003194983.1| 30S ribosomal protein S3 [Robiginitalea biformata HTCC2501]
gi|88786036|gb|EAR17205.1| putative 30S ribosomal protein S3 [Robiginitalea biformata
HTCC2501]
Length = 236
Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 98/216 (45%), Positives = 150/216 (69%), Gaps = 2/216 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ W S W+ G++YG L ED KIR+Y+ L +A V++++IERT
Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDKLAEDDKIRKYIHARLAKASVSRVIIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + + +ARPG+IIGK G +++K++++L +T+ E+ +++ E+ +PE++A L+A SI
Sbjct: 60 LKLITVTITTARPGIIIGKGGQEVDKLKEELKKITDKEVQINIFEIKRPELDANLVAASI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E R+ +RRA+K A+ +AMR A+G+K+ SGRLNGAE++R+E Y +GR+PL T RA
Sbjct: 120 ARQIESRISYRRAIKMAIAAAMRMNAEGIKIQISGRLNGAEMARSESYKDGRIPLSTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
IDY A T YG G+KV++ + EV P
Sbjct: 180 DIDYALHEAHTTYGRLGVKVWIM-KGEVYGKRELSP 214
>gi|87306532|ref|ZP_01088679.1| 30S ribosomal protein S3 [Blastopirellula marina DSM 3645]
gi|87290711|gb|EAQ82598.1| 30S ribosomal protein S3 [Blastopirellula marina DSM 3645]
Length = 240
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 96/240 (40%), Positives = 150/240 (62%), Gaps = 15/240 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL--------QCHLKQAGV 52
MGQK+NPI FR GV W SRWFA +Y LL ED +IR+++ + + AG+
Sbjct: 1 MGQKVNPIAFRTGVMQGWKSRWFASKKDYADLLFEDQRIRKFIGGHPDEKIRQKYRNAGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEIN 112
+I I+RT ++ ++ ARPGLIIG+KG ++EK++++L N+ I++ + E+ +PE+
Sbjct: 61 DRIEIDRTRDEVKVTLFVARPGLIIGQKGQEVEKLQEELQNLVGRRINMKIEEIGRPELR 120
Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172
A L+A+ IA QL +R FRR MKRA++S M GA G+KV +GRL GAE++R E ++G
Sbjct: 121 AQLVAEDIADQLAKRSSFRRTMKRALESTMEAGARGIKVQLAGRLGGAEMARREKAIQGS 180
Query: 173 VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR-------DEVSDSDSTIPAAEHRVVEK 225
+PL T+RA IDYG A+TA G G++V+++ D + ++ P + ++
Sbjct: 181 IPLSTIRAKIDYGFTEAKTAQGHIGVQVWINNGFYEENESDVANAAEGQAPKKSKKAYKR 240
>gi|298207733|ref|YP_003715912.1| putative 30S ribosomal protein S3 [Croceibacter atlanticus
HTCC2559]
gi|83850370|gb|EAP88238.1| putative 30S ribosomal protein S3 [Croceibacter atlanticus
HTCC2559]
Length = 236
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 97/216 (44%), Positives = 148/216 (68%), Gaps = 2/216 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ W S W+ G++YG L ED KIR+Y+ L +A V++++IERT
Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDKLAEDDKIRKYIHARLSKASVSRVIIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + + +ARPG+IIGK G +++K++++L +T E+ +++ E+ +PE++A L+ S+
Sbjct: 60 LKLVTVTITTARPGIIIGKGGQEVDKLKEELKKLTGKEVQINIFEIKRPELDAHLVGASV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E R+ +RRA+K A+ +AMR A+G+K+ +GRLNGAE++R E Y EGR+PL T RA
Sbjct: 120 ARQVENRISYRRAIKMAIAAAMRMNAEGIKIQIAGRLNGAEMARVESYKEGRIPLSTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
IDY A+T YG GIKV++ + EV P
Sbjct: 180 DIDYALVEAQTTYGKLGIKVWIM-KGEVYGKRELSP 214
>gi|120437168|ref|YP_862854.1| 30S ribosomal protein S3 [Gramella forsetii KT0803]
gi|152060864|sp|A0M592|RS3_GRAFK RecName: Full=30S ribosomal protein S3
gi|117579318|emb|CAL67787.1| 30S ribosomal protein S3 [Gramella forsetii KT0803]
Length = 239
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 96/216 (44%), Positives = 149/216 (68%), Gaps = 2/216 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ W S W+ G++YG L ED KIR+Y+ L +A V++++IERT
Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDKLAEDDKIRKYIHARLSKASVSRVIIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + + +ARPG+IIGK G +++K++++L +T+ E+ +++ E+ +PE++A L+ S+
Sbjct: 60 LKLVTVTITTARPGIIIGKGGQEVDKLKEELKKITDKEVQINIFEIKRPELDAHLVGASV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E R+ +RRA+K A+ +AMR A+G+K+ SGRLNGAE++R+E Y +GR+PL T RA
Sbjct: 120 ARQIENRISYRRAIKMAIAAAMRMNAEGIKIEISGRLNGAEMARSESYKDGRIPLSTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
IDY A T YG G+KV++ + EV P
Sbjct: 180 DIDYALVEAHTTYGRLGVKVWIM-KGEVYGKRELSP 214
>gi|139390190|ref|YP_001123763.1| ribosomal protein S3 [Lobularia maritima]
gi|152060537|sp|A4QLN2|RR3_LOBMA RecName: Full=30S ribosomal protein S3, chloroplastic
gi|134286967|dbj|BAF50587.1| ribosomal protein S3 [Lobularia maritima]
Length = 218
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 77/218 (35%), Positives = 130/218 (59%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + S WFA+ +Y L ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHRSLWFAQPKKYSEGLEEDKKIRDCIKNYVQKNIRISSGMEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGT---DIEKIRKKLSNMTNSEIHLSVNEVPKP 109
A+I I++ +II+Y P L+I K +++ +K N N ++++++ + P
Sbjct: 61 ARIEIQKRIDLIQIIIYMGFPKLLIEDKPRRVEELQMTVQKELNCVNRKLNIAITRISNP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E
Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+ A IDY + T YG GIK+++ + +E
Sbjct: 181 EGRVPLQTIEAKIDYCSYTVRTIYGVLGIKIWIFVDEE 218
>gi|730656|sp|P41117|RS3_ACHAX RecName: Full=30S ribosomal protein S3
gi|456690|gb|AAA21916.1| ribosomal protein S3 [Acholeplasma axanthum]
Length = 257
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 91/232 (39%), Positives = 136/232 (58%), Gaps = 6/232 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK+NPI FR+GV W+S+W+A AL+ ED IR++L A V+ + IER
Sbjct: 1 MGQKVNPIGFRVGVIRDWDSKWYADKKIVPALVKEDAVIRKFLNKKYNNAAVSHVEIERL 60
Query: 60 ----THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATL 115
K +I ++S +PG++IG++ +++ L +T EI +V EV KPE+ ATL
Sbjct: 61 KELKVKKRVKITLHSGKPGVVIGREAATMKETIASLEKLTKKEIVFNVVEVRKPEVVATL 120
Query: 116 IAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPL 175
+AQS+A+QLE R FR++ K +++ A G+K S RL G E++RTE Y EG+VPL
Sbjct: 121 VAQSMAEQLENRASFRKSTKNCYAKSIKVRAKGIK-TLSQRLGGREMARTEGYSEGQVPL 179
Query: 176 QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
TLRA ++Y TA A+T YG GIKV++ + + E + +
Sbjct: 180 HTLRADVEYATAEAQTTYGILGIKVWIYHGEILPGQSHEELRKERQSSASSN 231
>gi|126680568|gb|ABO26504.1| ribosomal protein S3 [Candidatus Phytoplasma pyri]
Length = 245
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 85/215 (39%), Positives = 131/215 (60%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ +W+S+WFA + +HED IR ++ + +A ++KI IER+
Sbjct: 1 MGQKSNPNGLRLGIIKSWDSKWFANFKKTPQFIHEDFCIRNFINKNYSKALISKIEIERS 60
Query: 61 HKNCR----IIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K + I ++ + +I GK ++KI K++ +T E+ +V E+ P+ A L+
Sbjct: 61 KKKDKEVIKINLHVVKTNIINGKDNESLKKITKQIEKITKKEVVFNVIEIKNPDKVAILV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
A+++A+QLE+R FRR K A+Q ++ G GVK + SGRL G E++R+E YLEGRVPL
Sbjct: 121 AKTMAEQLEQRFYFRRVQKMAIQKVLKTGVKGVKTLISGRLGGLEMARSEGYLEGRVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
T RA ++Y A T YGS G+KV++ D +
Sbjct: 181 TFRADVEYAFTEAHTTYGSFGVKVWIFHGDVLPGE 215
>gi|88608356|ref|YP_506163.1| ribosomal protein S3 [Neorickettsia sennetsu str. Miyayama]
gi|123722758|sp|Q2GED3|RS3_NEOSM RecName: Full=30S ribosomal protein S3
gi|88600525|gb|ABD45993.1| ribosomal protein S3 [Neorickettsia sennetsu str. Miyayama]
Length = 211
Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 90/209 (43%), Positives = 133/209 (63%), Gaps = 1/209 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ FRL + + S W+++ +Y + ED + +Y++ G++K++I+R
Sbjct: 1 MGQKVNPVGFRLWTHGSHGSVWYSKSCDYAKTVAEDYFVTKYVESSFAHIGISKVIIKRK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+C I ++ +PGLIIGKKG D+E R KL+ L+V EV KP +A L+A+SI
Sbjct: 61 GASCDITLHCMKPGLIIGKKGADLESFRLKLNKKFGFVPSLNVVEVKKPNSSAVLVAKSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A QLE+R FRR +K+A+ + MR GVKV SGRL+GAE++RTE + EG +PL T+R
Sbjct: 121 AFQLEKRSSFRRVIKKAIATVMRESDVKGVKVACSGRLSGAEIARTEVFKEGSIPLHTMR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEV 208
A IDY A A T YG G+KV++ +
Sbjct: 181 ADIDYWVAEAHTTYGVIGVKVWIYRGNIF 209
>gi|157325568|ref|YP_001468346.1| ribosomal protein S3 [Ipomoea purpurea]
gi|171769956|sp|A7Y3I9|RR3_IPOPU RecName: Full=30S ribosomal protein S3, chloroplastic
gi|157056796|gb|ABV02386.1| ribosomal protein S3 [Ipomoea purpurea]
Length = 218
Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 76/217 (35%), Positives = 130/217 (59%), Gaps = 11/217 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG +S WF++ Y L ED KIR +++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFSQPKNYSESLQEDQKIRNFIKNYVQKNMITSSGVTGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGT---DIEKIRKKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I++ P L+I + +++ +K N N ++++++ + KP
Sbjct: 61 ARIDIQKGIDLIKVIIFMGFPKLLIENRPRATEELQMTLQKELNCVNRKLNIAITRIAKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
N ++A+ IA QL+ RV FR+AMK+A++ A + G++V +GR++G E++R E
Sbjct: 121 YGNPKILAEFIAGQLKNRVSFRKAMKKAIELAEKADTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
EGRVP QT+RA IDY + T YG GIK+++ L +
Sbjct: 181 EGRVPRQTIRAKIDYCSYPVRTIYGVLGIKIWIFLDE 217
>gi|290487124|gb|ADD29946.1| ribosomal protein S3 [Oxalis latifolia]
Length = 223
Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 78/219 (35%), Positives = 131/219 (59%), Gaps = 11/219 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQK NP+ FRLG +S WFA+ + LHED KIR ++ ++++ G+
Sbjct: 1 MGQKTNPLGFRLGTTQGHHSLWFAQPRNFSESLHEDQKIRNCIKNYVQKNTRVFSGIEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ +II+Y P L+I + IE+++ +K N N ++++++ + P
Sbjct: 61 ARIEIKKKIDLIQIIIYMGFPKLLIEGRPRRIEELQTNVQKELNCLNQKLNIAIIRIANP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ ++A+ IA QL+ RV FR+AMK+A++ + G++V SGR++G E++R E
Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQISGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208
EGRVPLQT+RA I+Y + T YG GIK+++ + +E
Sbjct: 181 EGRVPLQTIRAKIEYCSYTVRTIYGVLGIKIWIFIDEEK 219
>gi|313183860|ref|YP_004021703.1| ribosomal protein S3 [Prunus persica]
gi|309321472|gb|ADO65013.1| ribosomal protein S3 [Prunus persica]
Length = 218
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 79/218 (36%), Positives = 132/218 (60%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG +S WFA+ Y L ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGGTQGHHSLWFAQPKNYSEDLQEDQKIRDCIKNYVQKNMKISSNVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I+Y P L+I + IE+++ +K N N ++++++ + P
Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKLLIEDRTRRIEELQMNVQKELNCVNRKLNIAIRRISNP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ ++A+ IA QL+ RV FR+AMK+A++ + G G++V +GR++G E++R E
Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY T YG GIK+++ + +E
Sbjct: 181 EGRVPLQTIRAKIDYCAYAVRTIYGVLGIKIWIFVDEE 218
>gi|37731269|gb|AAO74953.1| ribosomal protein S3 [Aster yellows phytoplasma]
Length = 252
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKVALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A++LE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEKLENRMFFRRVQKMAIQKAIKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEGLPGQ 215
>gi|189485091|ref|YP_001956032.1| 30S ribosomal protein S3 [uncultured Termite group 1 bacterium
phylotype Rs-D17]
gi|226697772|sp|B1GZ89|RS3_UNCTG RecName: Full=30S ribosomal protein S3
gi|170287050|dbj|BAG13571.1| 30S ribosomal protein S3 [uncultured Termite group 1 bacterium
phylotype Rs-D17]
Length = 231
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 100/227 (44%), Positives = 145/227 (63%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KI+P RLG W S+WF E + ED +IR YL+ LK A V+KI+IER
Sbjct: 1 MGHKIHPKSIRLGYIKDWESKWF-NLKEMPNFIEEDYRIRVYLKNRLKLASVSKIVIERP 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K R+ +Y+ARPG++IGK G IE +RK++ MT + +++ E+ +PEI+A L +++I
Sbjct: 60 GKYLRVSIYTARPGIVIGKGGQGIESLRKEIETMTAKKTFVNIMEIKRPEIDAQLASENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE+++ FRR MKR ++ AM G G+KV+ SGRL GAE++RTE EGR+PLQT RA
Sbjct: 120 AFQLEKQIAFRRVMKRTIEKAMMSGVQGIKVMVSGRLGGAEIARTEWLKEGRIPLQTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDYG + A T G G+KV++ ++ + + VV+ D+
Sbjct: 180 DIDYGFSEACTPMGHIGVKVWIFKKEFFKKTAKELAEDAKVVVDLDT 226
>gi|225010523|ref|ZP_03700994.1| ribosomal protein S3 [Flavobacteria bacterium MS024-3C]
gi|225005352|gb|EEG43303.1| ribosomal protein S3 [Flavobacteria bacterium MS024-3C]
Length = 238
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 100/216 (46%), Positives = 150/216 (69%), Gaps = 2/216 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ W S W+ G++YG L ED KIR+Y+ L +A V++++IERT
Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDRLAEDDKIRKYVFARLAKASVSRVIIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I + +ARPG+IIGK G +++K++++L +T+ E+ +++ E+ +PE++A L+A SI
Sbjct: 60 LKLVTITITTARPGIIIGKGGQEVDKLKEELKKITDKEVQINIFEIKRPEVDANLVAASI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
+Q+E R+ +RRA+K A+ +AMR A+G+KV+ SGRLNGAE++R+E Y +GR+PL T RA
Sbjct: 120 CRQIEGRISYRRAIKMAIAAAMRMNAEGIKVLISGRLNGAEMARSEGYKDGRIPLSTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
IDY A T YG GIKV++ + EV P
Sbjct: 180 DIDYALHEAHTTYGRLGIKVWIM-KGEVYGKRELSP 214
>gi|110227117|ref|YP_665596.1| ribosomal protein S3 [Populus alba]
gi|122230950|sp|Q14FB9|RR3_POPAL RecName: Full=30S ribosomal protein S3, chloroplastic
gi|109945555|dbj|BAE97243.1| ribosomal protein S3 [Populus alba]
Length = 218
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 76/218 (34%), Positives = 127/218 (58%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG S WFA+ + L ED KIR ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQDHYSLWFAQPKNFSEGLQEDQKIRNCIKNYVQKNMKISSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
I I++ ++I+Y P + K I++++ +K N N ++++S+ + P
Sbjct: 61 GHIEIQKRIDVIQVIIYLGFPKFLTEGKPKRIKELQINVQKELNCMNRKLNISITRIENP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
++ ++A+ IA QL+ RV FR+AMK+A++ + G++V +GRL+G E++R E
Sbjct: 121 YMHPNVLAEFIAGQLKNRVSFRKAMKKAIELTEQSNTKGIQVQIAGRLDGKEIARAEWVR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQTLRA I+Y + T YG GIK+++ + +E
Sbjct: 181 EGRVPLQTLRAKINYCSYTVRTIYGVLGIKIWIFVDEE 218
>gi|139389302|ref|YP_001123068.1| ribosomal protein S3 [Aethionema grandiflorum]
gi|139390386|ref|YP_001122984.1| ribosomal protein S3 [Aethionema cordifolium]
gi|152060526|sp|A4QJF3|RR3_AETCO RecName: Full=30S ribosomal protein S3, chloroplastic
gi|152060527|sp|A4QJN7|RR3_AETGR RecName: Full=30S ribosomal protein S3, chloroplastic
gi|134286179|dbj|BAF49808.1| ribosomal protein S3 [Aethionema cordifolium]
gi|134286264|dbj|BAF49892.1| ribosomal protein S3 [Aethionema grandiflorum]
Length = 218
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 76/218 (34%), Positives = 131/218 (60%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + +S WFA+ +Y L ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFAQPKKYCEGLEEDKKIRDCIKNYVQKNIRISSGMEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGT---DIEKIRKKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I+Y P L+I K +++ +K N N ++++++ + P
Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKLLIEDKPRRVEELQMNVQKELNCVNRKLNIAITRISTP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E
Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+ A IDY + T YG GIK+++ + +E
Sbjct: 181 EGRVPLQTIEAKIDYCSYTVRTIYGVLGIKIWIFVDEE 218
>gi|313184031|ref|YP_004021188.1| ribosomal protein S3 [Castanea mollissima]
gi|290487128|gb|ADD29948.1| ribosomal protein S3 [Quercus nigra]
gi|309321558|gb|ADO65098.1| ribosomal protein S3 [Castanea mollissima]
Length = 221
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 78/220 (35%), Positives = 132/220 (60%), Gaps = 13/220 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG +S WFA+ Y L ED KIR++++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGATQGHHSLWFAQPQNYSEGLQEDQKIRDWIKNYVQKNIQISSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKG-----TDIEKIRKKLSNMTNSEIHLSVNEVP 107
A I I++ ++I+Y P L++ KG +++ +K N N ++++++ +
Sbjct: 61 ACIKIQKRIDLIQVIIYMGFPKLLLEGKGGPRRIEELQIDVQKEINCVNRKLNIALTRIT 120
Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTEC 167
P + ++A+ IA QL+ RV FR+AMK+A++ + G G++V +GR++G E++R E
Sbjct: 121 NPYGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEW 180
Query: 168 YLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY + T YG GIK+++ + +E
Sbjct: 181 IREGRVPLQTIRAKIDYCSYAVGTIYGVLGIKIWIFVDEE 220
>gi|145982742|gb|ABQ01153.1| ribosomal protein S3 [Paulownia witches'-broom phytoplasma]
Length = 243
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 130/215 (60%), Gaps = 5/215 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++A+PG+IIGK G K+ KL +T +++L+V EV I +I
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKT-LIKRFII 119
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 120 AQNMAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 179
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 180 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 214
>gi|295135695|ref|YP_003586371.1| 30S ribosomal protein S3 [Zunongwangia profunda SM-A87]
gi|294983710|gb|ADF54175.1| 30S ribosomal protein S3 [Zunongwangia profunda SM-A87]
Length = 239
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 94/212 (44%), Positives = 147/212 (69%), Gaps = 1/212 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ W S W+ G++YG L ED KIR+Y+ L +A V++++IERT
Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDKLAEDDKIRKYIHARLSKASVSRVIIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + + +ARPG+IIGK G +++K++++L +T+ E+ +++ E+ +PE++A L+ S+
Sbjct: 60 LKLVTVTITTARPGIIIGKGGQEVDKLKEELKKITDKEVQINIFEIKRPELDAHLVGASV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E R+ +RRA+K A+ +AMR A+G+K+ SGRLNGAE++R+E Y +GR+PL T RA
Sbjct: 120 ARQIENRISYRRAIKMAIAAAMRMNAEGIKIEISGRLNGAEMARSEAYKDGRIPLSTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
IDY A T YG G+KV++ + D
Sbjct: 180 DIDYALVEAHTTYGRLGVKVWIMKGEVYGKRD 211
>gi|254796653|ref|YP_003081489.1| ribosomal protein S3 [Neorickettsia risticii str. Illinois]
gi|254589890|gb|ACT69252.1| ribosomal protein S3 [Neorickettsia risticii str. Illinois]
Length = 211
Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats.
Identities = 89/209 (42%), Positives = 132/209 (63%), Gaps = 1/209 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ FRL + + S W+++ +Y + ED + Y++ G++K++I+R
Sbjct: 1 MGQKVNPVGFRLWTHGSHGSVWYSKSCDYAKTVAEDYFVTRYVESSFAHIGISKVIIKRK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+C I ++ +PGLIIGKKG D+E + KL+ L+V EV KP +A L+A+SI
Sbjct: 61 GVSCDITLHCVKPGLIIGKKGADLESFKLKLNKKFGFVPSLNVVEVKKPNSSAVLVAKSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A QLE+R FRR +K+A+ + MR GVKV SGRL+GAE++RTE + EG +PL T+R
Sbjct: 121 AFQLEKRSSFRRVIKKAIATVMRESDVKGVKVACSGRLSGAEIARTEVFKEGSIPLHTMR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEV 208
A IDY A A T YG G+KV++ +
Sbjct: 181 ADIDYWVAEAHTTYGVIGVKVWIYRGNIF 209
>gi|189162310|ref|YP_001936556.1| ribosomal protein S3 [Fagopyrum esculentum subsp. ancestrale]
gi|166065396|gb|ABY79771.1| ribosomal protein S3 [Fagopyrum esculentum subsp. ancestrale]
Length = 218
Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats.
Identities = 79/218 (36%), Positives = 132/218 (60%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + + S WFA+ Y LHED KIR+ ++ + +Q G+
Sbjct: 1 MGQKINPLGFRLGTSQSHYSIWFAQPKNYSEGLHEDQKIRDCIKNYAQQNVRASSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I+Y P L+I + IE+++ +K N N ++++++ + KP
Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKLLIENRPRGIEELQMNVQKKLNSVNRKLNIAITRIAKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ ++A+ IA QL+ RV FR+AMK+A++ + G+++ +GR++G E++R E
Sbjct: 121 YRHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARIEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+ A IDY T YG GIK+++ + +E
Sbjct: 181 EGRVPLQTIHAKIDYCAYTVRTIYGVLGIKIWIFIDEE 218
>gi|37730860|gb|AAO74902.1| ribosomal protein S3 [Aster yellows phytoplasma]
gi|37731196|gb|AAO74905.1| ribosomal protein S3 [Aster yellows phytoplasma]
gi|37731200|gb|AAO74908.1| ribosomal protein S3 [Aster yellows phytoplasma]
Length = 252
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 92/215 (42%), Positives = 130/215 (60%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ W S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRIWESQWCVNDKEIPNLIKEDFLIRKLINNFAKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKVALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A++LE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEKLENRMFFRRVQKMAIQKAIKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG GIKV++ + +
Sbjct: 181 TLRADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 215
>gi|225542949|emb|CAX63059.1| rps3 protein [Himachal periwinkle phytoplasma]
Length = 252
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 130/215 (60%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ TW S+W E L+ ED IR+ + K++ +++I IER
Sbjct: 1 MGQKTNPNGLRLGIIRTWESQWCVNDKEIPNLIKEDFLIRKLINNFTKKSAISQIDIERL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I V++A+PG+IIGK G K+ KL +T +++L+V EV + A LI
Sbjct: 61 KEKNKNRITISVHTAKPGVIIGKDGDTRNKLVAKLKELTQKDVNLNVLEVKNSDKIALLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL
Sbjct: 121 AQNMAEQLENRMFFRRVQKMAIQKALKTGAKGVKTLISGRLGGAEIARSEGHAEGRVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T Y GIKV++ + +
Sbjct: 181 TLRADIDYAAVEAHTTYEVLGIKVWIFHGEVLPGQ 215
>gi|108804968|ref|YP_644905.1| 30S ribosomal protein S3P [Rubrobacter xylanophilus DSM 9941]
gi|122975885|sp|Q1AU35|RS3_RUBXD RecName: Full=30S ribosomal protein S3
gi|108766211|gb|ABG05093.1| SSU ribosomal protein S3P [Rubrobacter xylanophilus DSM 9941]
Length = 218
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 95/212 (44%), Positives = 145/212 (68%), Gaps = 8/212 (3%)
Query: 1 MGQKINPILFRLGVNC-----TWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKI 55
MGQK++P FRLGV + S+W++ ++ LL EDLKIRE+++ L +AG+A+I
Sbjct: 1 MGQKVHPEGFRLGVRRKGEKVDFKSQWYSD-RDFAELLGEDLKIREHIERKLARAGIAEI 59
Query: 56 LIERTHKNCRI--IVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINA 113
I++ + + +++ARPG++IGK G++++ +R+ L +T+ ++ ++V EV +PE+NA
Sbjct: 60 EIKKAAEQGEVVVDIHTARPGIVIGKGGSEVDALRRDLERLTSKKVQVNVREVSRPELNA 119
Query: 114 TLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV 173
L+A+SIA+QLE R FRR MKRA+ SAMR GA G ++ SGRL G E+SR+E EG+V
Sbjct: 120 KLVAESIAEQLEGRAAFRRTMKRALTSAMRSGAVGARIQCSGRLGGIEMSRSETVSEGKV 179
Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
PL TL A IDYG A T G G+KV+++
Sbjct: 180 PLHTLDADIDYGFKEANTQMGQIGVKVWINHG 211
>gi|290487096|gb|ADD29932.1| ribosomal protein S3 [Meliosma aff. cuneifolia Moore 333]
Length = 218
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 77/218 (35%), Positives = 133/218 (61%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG +S WFA+ +Y L ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQGHHSVWFAQPKKYSEGLEEDQKIRDCIKNYVQKNMRISSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I+Y P L+I + +E+++ +K + N ++++++ + KP
Sbjct: 61 ARIEIQKRIDLIQVIIYIGFPKLLIEGRPRGVEELQINVQKKFHSVNRKLNIAITRIAKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E
Sbjct: 121 YGQPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY + T YG GIK+++ + +E
Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFVDEE 218
>gi|91984030|ref|YP_567116.1| ribosomal protein S3 [Vitis vinifera]
gi|122224043|sp|Q0ZIY0|RR3_VITVI RecName: Full=30S ribosomal protein S3, chloroplastic
gi|91701688|gb|ABE47572.1| ribosomal protein S3 [Vitis vinifera]
gi|147825330|emb|CAN62276.1| hypothetical protein VITISV_011840 [Vitis vinifera]
Length = 218
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 78/218 (35%), Positives = 132/218 (60%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG +S WFA+ Y L ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFAQPKNYSKGLQEDQKIRDCIKNYVQKNIRISSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I+Y P L++ K IE+++ +K N N ++++++ + KP
Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKLLVEGKPRRIEELQMNVQKELNYVNRKLNIAITRITKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ ++A+ IA QL RV FR+A+K+A++ + G++V +GR++G E++R E
Sbjct: 121 YGHPNILAEFIAGQLRNRVSFRKAIKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY + T YG GIK+++ + +E
Sbjct: 181 EGRVPLQTIRAKIDYCSYRVRTIYGVLGIKIWIFVDEE 218
>gi|159161288|ref|YP_001542566.1| ribosomal protein S3 [Cuscuta exaltata]
gi|172048137|sp|A8W3F9|RR3_CUSEX RecName: Full=Plastid 30S ribosomal protein S3
gi|158938713|gb|ABW83730.1| ribosomal protein S3 [Cuscuta exaltata]
Length = 219
Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 74/215 (34%), Positives = 132/215 (61%), Gaps = 11/215 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG +S WF++ Y L ED KIR++++ +++ G+
Sbjct: 1 MGQKINPLGFRLGTTQDHHSLWFSQPKNYSESLQEDKKIRDFIKNYVQNNMIKASGAEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ +++++ P L+I + I++++ +K N N ++++++ + KP
Sbjct: 61 ARIYIQKRIDLIQVVIFMGFPKLLIETRPQGIKELQRTLQKEFNFGNQKLNITITRIEKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
N ++A+ IA QL+ RV FR+AMK+A++ A + G++V +GR++G E++R E
Sbjct: 121 YGNPNILAEFIAVQLKNRVSFRKAMKKAIELAEQADTKGIQVQIAGRVDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
EGRVP QT+RA++DY + T YG G+K+++ L
Sbjct: 181 EGRVPRQTIRANLDYCSYPVRTIYGVLGVKIWIFL 215
>gi|290487130|gb|ADD29949.1| ribosomal protein S3 [Staphylea colchica]
Length = 219
Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats.
Identities = 78/219 (35%), Positives = 131/219 (59%), Gaps = 11/219 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG +S WFA+ Y L ED KIR+ ++ ++K+ G+
Sbjct: 1 MGQKINPLGFRLGTTQGHHSHWFAQPKNYSEGLQEDKKIRDCIKNYVKKNKKISSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I++ P L+I + IE+++ +K N N ++++++ + P
Sbjct: 61 ARIEIQKRIDLIQVIIHMGFPKLLIESRPQRIEELQINVQKKLNCVNRKLNIAITRIANP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ ++A+ IA QL+ RV FR+AMK+A++ + G++V +GRL+G E++R
Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRLDGKEIARVGWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208
EGRVPLQT+RA IDY + T YG GIK+++ + +E
Sbjct: 181 EGRVPLQTIRAKIDYCSHTVRTIYGVLGIKIWIFIDEEK 219
>gi|262038271|ref|ZP_06011661.1| ribosomal protein S3 [Leptotrichia goodfellowii F0264]
gi|261747738|gb|EEY35187.1| ribosomal protein S3 [Leptotrichia goodfellowii F0264]
Length = 218
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 94/214 (43%), Positives = 145/214 (67%), Gaps = 1/214 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+G+ TW+SRWFA G +Y HEDLKI++Y++ + AG++ I IERT
Sbjct: 1 MGQKVDPRGMRIGIVKTWDSRWFAEGKDYLNNFHEDLKIKKYIKKNYYHAGISTIQIERT 60
Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
+ II+ + + G++IG+KG +IE ++ L +T ++ + V E+ P +A LIA+S
Sbjct: 61 SPTDITIIIETGKAGILIGRKGQEIEALKVNLEKLTGKKVQVKVQEIKNPNKDAQLIAES 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA +E+RV ++RA+++A+Q A + G G+K++ SGRLNGAE++R+E L GRVPL TLR
Sbjct: 121 IATAIEKRVAYKRAVQQAIQRAEKSGVKGIKIMVSGRLNGAEIARSEWTLSGRVPLHTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
A +DY TA A T YG+ G+KV+V + +
Sbjct: 181 ADVDYATATAHTTYGALGLKVWVFNGEVLPTKKE 214
>gi|162456240|ref|YP_001618607.1| 30S ribosomal protein S3 [Sorangium cellulosum 'So ce 56']
gi|189045339|sp|A9FGJ7|RS3_SORC5 RecName: Full=30S ribosomal protein S3
gi|161166822|emb|CAN98127.1| 30S ribosomal protein S3 [Sorangium cellulosum 'So ce 56']
Length = 230
Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats.
Identities = 100/229 (43%), Positives = 147/229 (64%), Gaps = 14/229 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +P FR+GV TW+S+W+ G+ Y LH+D++I+ ++ +L A +A + IER
Sbjct: 1 MGQKTHPYGFRVGVIKTWSSKWYEDGAAYQKWLHQDIRIKRAIKQYLYNANIAGVEIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKL--------------SNMTNSEIHLSVNEV 106
++IV++ARPG++IGK G IE ++ S+ T++E+ + V EV
Sbjct: 61 ANRAKVIVFTARPGMVIGKGGKGIETLKSGNVGTASKGETLFPGVSSFTDNEVFIDVQEV 120
Query: 107 PKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTE 166
K E NA L+A++IA QLERR+ FRRAMK+AV +AM+FGA G++V +GRL G+E+SR E
Sbjct: 121 RKAETNAQLVAENIATQLERRIAFRRAMKKAVSTAMKFGAKGIRVRCAGRLGGSEMSRVE 180
Query: 167 CYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
Y EGRVPL TLRA I++G A A T G G+KV++ + + I
Sbjct: 181 TYREGRVPLHTLRADIEFGLAEARTKVGIIGVKVWMFKGEVLQRKARRI 229
>gi|114330008|ref|YP_740689.1| ribosomal protein S3 [Nandina domestica]
gi|122165923|sp|Q09FS2|RR3_NANDO RecName: Full=30S ribosomal protein S3, chloroplastic
gi|114054510|gb|ABI49903.1| ribosomal protein S3 [Nandina domestica]
Length = 218
Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats.
Identities = 80/218 (36%), Positives = 134/218 (61%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKI----REYLQCHLKQA----GV 52
MGQKINP+ FRLG + +S WFA+ Y L ED KI R Y+Q +++ + G+
Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFAQPKNYSEGLQEDQKIQDCIRNYVQKNMRISSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I+Y P L+I + IE+++ +K N N ++++++ + KP
Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKLLIEGRSRGIEELQSSVQKRFNSVNRKLNIAITRIAKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ ++A+ IA QL+ RV FR+A+K+A++ + G++V +GR++G E++R E
Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAIKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY + T YG+ GIK+++ +E
Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGALGIKIWIFTDEE 218
>gi|167391844|ref|YP_001671721.1| ribosomal protein S3 [Carica papaya]
gi|166344171|gb|ABY86821.1| ribosomal protein S3 [Carica papaya]
Length = 218
Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats.
Identities = 78/218 (35%), Positives = 132/218 (60%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + +S WFA+ Y L ED KIR++++ ++K+ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFAQPKNYSEGLQEDKKIRDFIKNYVKKNMRISSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I+Y P L+I K IE+++ +K N N ++++++ + P
Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKLLIEDKPQRIEELQRNVQKELNCVNRKLNIAIIRIANP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E
Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+ A I+Y T YG GIK+++ + +E
Sbjct: 181 EGRVPLQTIEAKINYCCYRVRTIYGVLGIKIWIFVDEE 218
>gi|224179456|ref|YP_002600842.1| ribosomal protein S3 [Pycnococcus provasolii]
gi|217314499|gb|ACK36841.1| ribosomal protein S3 [Pycnococcus provasolii]
Length = 286
Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats.
Identities = 84/241 (34%), Positives = 127/241 (52%), Gaps = 14/241 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ--AGVAKILIE 58
MGQK+NP FRLG + S WFA +Y L EDL +R++L +G++ +
Sbjct: 1 MGQKVNPFGFRLGYSQHHRSDWFASSQDYSKKLQEDLLVRKFLTREFPDTESGISAVYTR 60
Query: 59 RTHKNCRIIVYSARPGLIIGKK-----------GTDIEKIRKKLSNMTNSEIHLSVNEVP 107
R + + +++ARP +++G G + + + L + E
Sbjct: 61 RKGQLLSLEIHTARPRVLLGSNQETQDPTNRVSGLVQVRRDLEKLFPQKIPLSLRLVEET 120
Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMR-FGADGVKVIASGRLNGAELSRTE 166
+P+ N L+A S+A QLE+RV FRRA+K+ ++ A G GVKV SGRLNGAE++R+E
Sbjct: 121 QPDSNVALLAASLAHQLEKRVAFRRALKQTIKRAQTARGVLGVKVQISGRLNGAEIARSE 180
Query: 167 CYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
EGRVPL TLRA +DY T A T YG GIKV++ + + R +++
Sbjct: 181 WVREGRVPLHTLRAEVDYATHTARTLYGCLGIKVWLYKESQGLYQKQKTGMGQQRALDES 240
Query: 227 S 227
+
Sbjct: 241 N 241
>gi|327399517|ref|YP_004340386.1| 30S ribosomal protein S3 [Hippea maritima DSM 10411]
gi|327182146|gb|AEA34327.1| ribosomal protein S3 [Hippea maritima DSM 10411]
Length = 209
Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats.
Identities = 94/205 (45%), Positives = 140/205 (68%), Gaps = 1/205 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ TW SRW+A ++ ED KI++ ++ + AG++KI IER
Sbjct: 1 MGQKVNPIGLRLGITKTWTSRWYAE-RDFKDKFLEDQKIKKAIKSKVYYAGISKIEIERK 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +Y+A PG+IIG+KG ++EK+++ + +T+S + ++V +V PE +A L+A++I
Sbjct: 60 RNKMTVNIYAAMPGIIIGRKGAEVEKLKEYIKTLTDSNVTINVRDVSVPEKDAQLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A Q+E+R+ +RR MKRA A++ GA G+K+ SG+L GAE++RTE EGRVPL TLRA
Sbjct: 120 ALQIEKRMPYRRVMKRAAYLALKKGAKGIKIQISGKLGGAEMARTEWIKEGRVPLSTLRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLR 205
IDYG A + T G GIKV+V
Sbjct: 180 DIDYGFAESLTQAGVIGIKVWVFNG 204
>gi|325287054|ref|YP_004262844.1| 30S ribosomal protein S3 [Cellulophaga lytica DSM 7489]
gi|324322508|gb|ADY29973.1| ribosomal protein S3 [Cellulophaga lytica DSM 7489]
Length = 238
Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats.
Identities = 98/216 (45%), Positives = 150/216 (69%), Gaps = 2/216 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ W S W+ G++YG L ED KIR+Y+ L +A V++++IERT
Sbjct: 1 MGQKTNPIGNRLGIIRGWESNWY-GGNDYGDKLAEDDKIRKYVHARLAKASVSRVIIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + + +ARPG+IIGK G +++K++++L +T+ E+ +++ E+ +PE++A L+A S+
Sbjct: 60 LKLVTVTITTARPGIIIGKGGQEVDKLKEELKKITSKEVQINIFEIKRPEVDANLVAASV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E R+ +RRA+K A+ +AMR A+G+K+ SGRLNGAE++R+E Y +GR+PL T RA
Sbjct: 120 ARQIENRISYRRAIKMAIAAAMRMNAEGIKIQISGRLNGAEMARSEAYKDGRIPLSTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
IDY A T YG GIKV++ + EV P
Sbjct: 180 DIDYALNEAHTTYGRLGIKVWIM-KGEVYGKRELSP 214
>gi|91208939|ref|YP_538974.1| ribosomal protein S3 [Gossypium hirsutum]
gi|119368537|ref|YP_913225.1| ribosomal protein S3 [Gossypium barbadense]
gi|91207768|sp|Q2L946|RR3_GOSHI RecName: Full=30S ribosomal protein S3, chloroplastic
gi|125987746|sp|A0ZZ73|RR3_GOSBA RecName: Full=30S ribosomal protein S3, chloroplastic
gi|85687453|gb|ABC73665.1| ribosomal protein S3 [Gossypium hirsutum]
gi|119224899|dbj|BAF41285.1| Ribosomal protein S3 [Gossypium barbadense]
Length = 218
Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats.
Identities = 74/218 (33%), Positives = 131/218 (60%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + +S WFA+ +Y L ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFAQPKKYSEGLQEDKKIRDCIKNYVQKNTRLSSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGT---DIEKIRKKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I+Y P L+I K +++ +K N N ++++++ + P
Sbjct: 61 ARIEIQKRLDLIQVIIYMGFPKLLIEDKPRKLEELQMNVQKELNCMNRKLNIAITRIGNP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ ++A+ IA QL+ RV FR+AMK+A++ + G+++ +GR++G E++R E
Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+ A I+Y + T YG GIK+++ + +E
Sbjct: 181 EGRVPLQTIGAKIEYCSYRVRTIYGVLGIKIWIFIDEE 218
>gi|149179420|ref|ZP_01857974.1| 30S ribosomal protein S3 [Planctomyces maris DSM 8797]
gi|148841731|gb|EDL56140.1| 30S ribosomal protein S3 [Planctomyces maris DSM 8797]
Length = 233
Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats.
Identities = 91/206 (44%), Positives = 135/206 (65%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+ P FR+GV W SRW+A ++GALL ED K+R+++Q K AG+ K+ IERT
Sbjct: 1 MGQKVRPTGFRVGVVEDWRSRWYASKKDFGALLVEDQKVRKFIQTKYKFAGIPKVEIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++ARPG+IIG+KG ++++++ +L ++T + L + EV +A L+A+ I
Sbjct: 61 RDQVVVHLFTARPGIIIGRKGQEVDRLKAELEDLTGRRMELKIIEVDNALQSAALVAEDI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQL +R FRR +KRA+ M G G+K+ SGRL GAE+SR E G +PL TL+
Sbjct: 121 AQQLSKRGSFRRTIKRALDQVMETGVHGIKIELSGRLGGAEMSRREKASRGSIPLSTLQR 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRD 206
H+DYG A T +G G+KV++ L D
Sbjct: 181 HVDYGFREAHTTFGVIGVKVWIDLGD 206
>gi|194132137|gb|ACF33391.1| ribosomal protein S3 [Gonystylus bancanus]
Length = 218
Score = 221 bits (563), Expect = 7e-56, Method: Composition-based stats.
Identities = 76/218 (34%), Positives = 127/218 (58%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + +S WFA+ Y L ED K+R+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFAQPKNYSDGLQEDKKMRDCIKNYVQKNMRVSSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDI---EKIRKKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I+Y P L+I + I + +K N N ++++ V + P
Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKLLIEDRPGRIEGLQMNVQKELNCVNRKLNIVVTRIANP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E
Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+ A IDY + T YG GIK+++ + E
Sbjct: 181 EGRVPLQTIGAKIDYSSYTVGTIYGVLGIKIWIFIDKE 218
>gi|13518476|ref|NP_084835.1| ribosomal protein S3 [Lotus japonicus]
gi|27734485|sp|Q9BBP8|RR3_LOTJA RecName: Full=30S ribosomal protein S3, chloroplastic
gi|13359017|dbj|BAB33234.1| ribosomal protein S3 [Lotus japonicus]
Length = 218
Score = 221 bits (562), Expect = 8e-56, Method: Composition-based stats.
Identities = 81/218 (37%), Positives = 132/218 (60%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + +S WFA+ + Y L ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHDSIWFAQPTNYSENLKEDKKIRDCIKTYIQKTIKISSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
+I I++ ++I+Y P L+I K IE+++ +K N N ++++++ +
Sbjct: 61 GRIKIQKRIDLIQVIIYMGFPKLLIDGKPRRIEELQINVQKKMNYVNRKLNIAITRIANA 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ ++A+ IA QL+ RV FR+AMK+A++ + G GV+V +GR++G E++R E
Sbjct: 121 YRDPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGVQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY + T YG GIKV++ L E
Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKVWIFLNKE 218
>gi|149390480|ref|YP_001294309.1| ribosomal protein S3 [Illicium oligandrum]
gi|172048710|sp|A6MMY3|RR3_ILLOL RecName: Full=30S ribosomal protein S3, chloroplastic
gi|147917433|gb|ABQ52557.1| ribosomal protein S3 [Illicium oligandrum]
Length = 218
Score = 221 bits (562), Expect = 8e-56, Method: Composition-based stats.
Identities = 80/218 (36%), Positives = 131/218 (60%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + + WFA+ Y L ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHHCLWFAQPKNYSGGLQEDEKIRDCIKNYVQKHMRVSSGFEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I++ P +I + IE+++ +K N N +++++ V KP
Sbjct: 61 ARIGIQKKIDLIQVIIHIGFPHFLIEGRARGIEELQINVQKKLNSVNRRLNIAITRVAKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
T++A+ IA QL+ RV FR+AMK+A++ + G++V SGR+NG E++R E
Sbjct: 121 YGQPTILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQVQISGRINGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA ID+ + T YG GIK+++ L +E
Sbjct: 181 EGRVPLQTIRAKIDHCSYAVRTIYGVLGIKIWIFLDEE 218
>gi|110004235|emb|CAK98573.1| 30s ribosomal protein s3 [Spiroplasma citri]
Length = 252
Score = 221 bits (562), Expect = 8e-56, Method: Composition-based stats.
Identities = 95/234 (40%), Positives = 141/234 (60%), Gaps = 7/234 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+GV TW+SRW+A EY LH+D+KIR+ L LK A V+KI IERT
Sbjct: 1 MGQKVSPTGLRVGVIKTWDSRWYAEKQEYVKWLHQDIKIRKALMKELKGASVSKIEIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLS---NMTNSEIHLSVNEVPKPEINATLIA 117
K I + +AR G+++G++G +I K+ K + E+ ++V E+ P+ +A L+A
Sbjct: 61 KKEIVIFIRTARVGVVLGQEGKNIAKLVKLVHITIGDRKMEVKINVVEIKNPDTDAQLVA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+IA+Q+ R FR K A++ AM+ GA G+K SGRL G +++RTE Y +G VPL T
Sbjct: 121 NTIAEQIVNRASFRSVQKLAIKKAMKAGAQGIKTSVSGRLGGVDMARTEGYTKGTVPLAT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRD----EVSDSDSTIPAAEHRVVEKDS 227
LR+ IDY A A T YG G+KV++ + E+ + P E R + +
Sbjct: 181 LRSDIDYALAEALTTYGQIGVKVWICKGEILSKELVSTSDEKPKFEKRDFNRSN 234
>gi|189501205|ref|YP_001960675.1| 30S ribosomal protein S3 [Chlorobium phaeobacteroides BS1]
gi|226697680|sp|B3EP55|RS3_CHLPB RecName: Full=30S ribosomal protein S3
gi|189496646|gb|ACE05194.1| ribosomal protein S3 [Chlorobium phaeobacteroides BS1]
Length = 252
Score = 221 bits (562), Expect = 8e-56, Method: Composition-based stats.
Identities = 98/226 (43%), Positives = 150/226 (66%), Gaps = 2/226 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ--AGVAKILIE 58
MGQK++P FRLG+ W SRW+ G + +D IR Y+ LK+ AGVA+I+IE
Sbjct: 1 MGQKVHPTGFRLGIIKDWTSRWYDDGPVIAEKIKQDQVIRNYVNTRLKKERAGVARIVIE 60
Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118
RT K+ +I +++ARPG ++G+KG +I + ++L+ +T E+ + V EV KPE+ A LI +
Sbjct: 61 RTTKHIKINIFAARPGAVVGRKGEEINNLSQELNRITGKEVKIDVVEVVKPEVEAQLIGE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
+IA QLE RV FRRAMK+A+Q AMR GA+G+++ +GRL G E++R+E Y EG++PL T+
Sbjct: 121 NIAYQLENRVSFRRAMKQAIQQAMRAGAEGIRIRCAGRLGGVEIARSEQYKEGKIPLHTI 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
RA++DY + A T G+ GIKV+V + + + E + +
Sbjct: 181 RANVDYASVTAHTIAGAIGIKVWVYKGEVLVQRIDAVEEEEMKKIR 226
>gi|325210966|ref|YP_004286042.1| ribosomal protein S3 [Gossypium thurberi]
gi|290775828|gb|ADD62324.1| ribosomal protein S3 [Gossypium thurberi]
Length = 218
Score = 221 bits (562), Expect = 8e-56, Method: Composition-based stats.
Identities = 74/218 (33%), Positives = 131/218 (60%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + +S WFA+ +Y L ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFAQPKKYSEGLQEDKKIRDCIKNYVQKNMRLSSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGT---DIEKIRKKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I+Y P L+I K +++ +K N N ++++++ + P
Sbjct: 61 ARIEIQKRLDLIQVIIYMGFPKLLIEDKPRKLEELQMNVQKELNCMNRKLNIAITRIGNP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ ++A+ IA QL+ RV FR+AMK+A++ + G+++ +GR++G E++R E
Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+ A I+Y + T YG GIK+++ + +E
Sbjct: 181 EGRVPLQTIGAKIEYCSYRVRTIYGVLGIKIWIFIDEE 218
>gi|134093239|ref|YP_001109540.1| ribosomal protein S3 [Populus trichocarpa]
gi|152060541|sp|A4GYU9|RR3_POPTR RecName: Full=30S ribosomal protein S3, chloroplastic
gi|133712101|gb|ABO36744.1| ribosomal protein S3 [Populus trichocarpa]
Length = 218
Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats.
Identities = 76/218 (34%), Positives = 127/218 (58%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG S WFA+ + L ED KIR ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQDHYSLWFAQPKNFFEGLQEDQKIRNCIKNYVQKNMKISSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
I I++ ++I+Y P + K I++++ +K N N ++++S+ + P
Sbjct: 61 GHIEIQKRIDVIQVIIYLGFPKFLTEGKPKRIKELQINVQKELNCMNRKLNISITRIENP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
++ ++A+ IA QL+ RV FR+AMK+A++ + G++V +GRL+G E++R E
Sbjct: 121 YMHPNVLAEFIAGQLKNRVSFRKAMKKAIELTEQSNTKGIQVQIAGRLDGKEIARAEWVR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQTLRA I+Y + T YG GIK+++ + +E
Sbjct: 181 EGRVPLQTLRAKINYCSYTVRTIYGVLGIKIWIFVDEE 218
>gi|68164842|ref|YP_247638.1| ribosomal protein S3 [Cucumis sativus]
gi|75317315|sp|Q4VZN0|RR3_CUCSA RecName: Full=30S ribosomal protein S3, chloroplastic
gi|67511437|emb|CAJ00797.1| ribosomal protein S3 [Cucumis sativus]
gi|74027138|gb|AAZ94688.1| ribosomal protein S3 [Cucumis sativus]
gi|115432842|gb|ABI97455.1| ribosomal protein S3 [Cucumis sativus]
gi|115498342|gb|ABI98784.1| ribosomal protein S3 [Cucumis sativus]
Length = 218
Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats.
Identities = 78/218 (35%), Positives = 131/218 (60%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG +S WFA +Y L ED KIR+ +Q ++++ G+
Sbjct: 1 MGQKINPLGFRLGATQGHHSLWFAHPKKYSEGLQEDQKIRDCIQNYVQKNMRIFSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I++ P L+I IE+++ +K N N ++++++ + P
Sbjct: 61 ARIEIQKRIDLIQVIIFMGFPKLVIDDGSRKIEELQINVQKEFNSGNRKLNIAITRIGNP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ ++A+ IA QL+ RV FR+AMK+A++ + G G++V +GR++G E++R E
Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY T YG GIK+++ + ++
Sbjct: 181 EGRVPLQTIRAKIDYCCYPVRTIYGILGIKIWIFVDEQ 218
>gi|194246739|ref|YP_002004378.1| 30S ribosomal protein S3 [Candidatus Phytoplasma mali]
gi|254764540|sp|B3QZZ7|RS3_PHYMT RecName: Full=30S ribosomal protein S3
gi|126680556|gb|ABO26496.1| ribosomal protein S3 [Candidatus Phytoplasma mali]
gi|126680559|gb|ABO26498.1| ribosomal protein S3 [Candidatus Phytoplasma mali]
gi|126680562|gb|ABO26500.1| ribosomal protein S3 [Candidatus Phytoplasma mali]
gi|193807096|emb|CAP18534.1| 30S ribosomal protein S3 [Candidatus Phytoplasma mali]
Length = 245
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 86/215 (40%), Positives = 131/215 (60%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ W+S+WFA + +HED IR ++ + +A +A+I IER+
Sbjct: 1 MGQKSNPNGLRLGIIKNWDSKWFANFKKTPQFIHEDFCIRNFINKNYSKALIAQIEIERS 60
Query: 61 HKNCRI----IVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K + ++ A+ +I GK ++KI K++ +T E+ +V E+ P+ A L+
Sbjct: 61 KKKDKEIIKINLHVAKSNIINGKDNESLKKITKQIEQITKKEVFFNVIEIKNPDKVAILV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
A+++A+QLE+R FRR K A+Q ++ G GVK + SGRL G E++R+E YLEGRVPL
Sbjct: 121 AKTMAEQLEQRFYFRRVQKMAIQKVLKTGVKGVKTLISGRLGGLEMARSEGYLEGRVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA ++Y A T YGS G+KV++ D +
Sbjct: 181 TLRADVEYAFTEAHTTYGSFGVKVWIFHGDVLPGE 215
>gi|108802679|ref|YP_636337.1| ribosomal protein S3 [Eucalyptus globulus subsp. globulus]
gi|309322484|ref|YP_003933998.1| ribosomal protein S3 [Eucalyptus grandis]
gi|91207767|sp|Q49KW0|RR3_EUCGG RecName: Full=30S ribosomal protein S3, chloroplastic
gi|60460845|gb|AAX21065.1| ribosomal protein S3 [Eucalyptus globulus subsp. globulus]
gi|308223318|gb|ADO23626.1| ribosomal protein S3 [Eucalyptus grandis]
Length = 216
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 78/214 (36%), Positives = 127/214 (59%), Gaps = 11/214 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ +L++ G+
Sbjct: 1 MGQKINPLGFRLGTTQGHHSIWFAQAKNYSDGLQEDQKIRNCIKNYLQKNMRISSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I + ++I+Y P L++ K IE+++ +K N N ++++++ + P
Sbjct: 61 ARIEIRKRIDLIQVIIYMGFPKLLLEGKTRRIEELQMNVQKELNCVNRKLNIAITRITNP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ ++A+ IA QL+ RV FR+A+K+A++ + G++V +GRL+G E++R E
Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAIKKAIELTEQADTKGIQVQIAGRLDGKEIARVEWMR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
EGRVPLQT+RA IDY + T YG GIK+++
Sbjct: 181 EGRVPLQTIRAKIDYCSYGVRTVYGVLGIKIWIF 214
>gi|124494195|gb|ABN13145.1| ribosomal protein S3 [Vaccinium witches'-broom phytoplasma]
Length = 278
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 83/215 (38%), Positives = 128/215 (59%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +PI RLG+ W+S+W+A + L+ ED IR + H +A +++I I+R
Sbjct: 1 MGQKSSPIGLRLGIIRNWDSKWYAEDKQVPNLILEDYXIRNLINNHYSKATISRIEIQRF 60
Query: 61 HKNCR----IIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K + I +Y+++ G+++G + + K+ +K+ + +I L+V EV P+ ATL+
Sbjct: 61 KKTNKEQIQIFLYTSKLGIVVGPENKEKNKLVEKIEKLIKKDIILNVLEVKNPDKVATLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A QLE+R FR A K Q ++ G GVK+I SGRL GAE++R E +G VPL
Sbjct: 121 AQNLAIQLEQRAFFRAAQKMTAQKVLKTGVKGVKIIISGRLGGAEIARQETLSKGLVPLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG G+KV++ + +
Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVWIYHGEVLPKQ 215
>gi|149390578|ref|YP_001294223.1| ribosomal protein S3 [Buxus microphylla]
gi|172048683|sp|A6MM75|RR3_BUXMI RecName: Full=30S ribosomal protein S3, chloroplastic
gi|146762323|gb|ABQ45287.1| ribosomal protein S3 [Buxus microphylla]
Length = 218
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 76/218 (34%), Positives = 131/218 (60%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG +S WFA+ Y L ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFAQPKSYSEGLQEDQKIRDCIKNYVQKNMRISSGAEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I+Y P L+I + +E+++ +K N N ++++++ + KP
Sbjct: 61 ARIEIQKRIDLIQVIIYMGFPKLLIEGRPRGVEELQINVQKEFNSVNRKLNIAITRIAKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
++A+ IA QL+ RV FR+AMK+A++ + G+++ +GR++G E++R E
Sbjct: 121 YGQPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA I Y + T YG GIK+++ + +E
Sbjct: 181 EGRVPLQTIRAKIYYCSYTVRTIYGVLGIKIWIFVDEE 218
>gi|114329693|ref|YP_740514.1| ribosomal protein S3 [Citrus sinensis]
gi|122166145|sp|Q09MD9|RR3_CITSI RecName: Full=30S ribosomal protein S3, chloroplastic
gi|113952659|gb|ABI49057.1| ribosomal protein S3 [Citrus sinensis]
Length = 219
Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 78/219 (35%), Positives = 132/219 (60%), Gaps = 11/219 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + +S WFA+ Y L ED KIR +++ ++K+ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFAKPKNYCEGLQEDQKIRNFIKNYIKKNIRISSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I+Y P L++ + IE+++ +K N N +I++++ + P
Sbjct: 61 ARIEIQKRIDLIQVIIYIGFPKLLLENRPRRIEELQMNVQKELNCVNRKINIAITRITNP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ ++A+ IA QL+ RV FR+AMK+A++ + G++V +GRL+G E++R E
Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRLDGKEIARAEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208
EGRVPLQT+ A IDY + T YG GIK+++ + ++
Sbjct: 181 EGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFVDEKK 219
>gi|290487114|gb|ADD29941.1| ribosomal protein S3 [Euonymus americanus]
Length = 218
Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 78/218 (35%), Positives = 136/218 (62%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG N + +S WF + + Y L ED KIR +++ +++Q G+
Sbjct: 1 MGQKINPLGFRLGTNQSHHSLWFVQPTNYSEGLQEDQKIRNFIKNYVQQNIKISSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++++Y P L++ + IE+++ +K N N ++++++ + P
Sbjct: 61 ARIEIQKRIDLIQVLIYIGFPKLLLESRTRRIEELQRKLQKELNCMNRKLNIAITRIANP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ T++A+ +A QL+ RV R+AMK+A++ A + G++V +GR+NG E++R E
Sbjct: 121 YGHPTILAEFLAGQLKSRVSCRKAMKKAIELAEQANTKGIQVQIAGRINGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA ID+ + A+T YG GIK+++ +E
Sbjct: 181 EGRVPLQTIRAKIDFCSYTAQTLYGVLGIKIWIFGDEE 218
>gi|161784230|ref|YP_001595546.1| ribosomal protein S3 [Lemna minor]
gi|88696808|gb|ABD48533.1| ribosomal protein S3 [Lemna minor]
Length = 218
Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 78/218 (35%), Positives = 130/218 (59%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG S WFA+ + L ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQNHYSFWFAQPKSFSMGLQEDEKIRDCIKNYVQKNMKTSSGFEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I++ P L+I + IE+++ +K N N +++++ V KP
Sbjct: 61 ARIEIQKRIDLIQVIIHIGFPNLLIEGRRRGIEELQTNVQKELNSANRRLNIAITRVEKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E
Sbjct: 121 YGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQTDTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY + T YG GIK+++ + D+
Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFVDDK 218
>gi|256420665|ref|YP_003121318.1| ribosomal protein S3 [Chitinophaga pinensis DSM 2588]
gi|256035573|gb|ACU59117.1| ribosomal protein S3 [Chitinophaga pinensis DSM 2588]
Length = 266
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 88/222 (39%), Positives = 148/222 (66%), Gaps = 1/222 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ W+S W+ +Y L ED KIR YL + + G+++I+IERT
Sbjct: 1 MGQKTNPIGNRLGIIRGWDSNWYGGKKDYATKLIEDNKIRTYLNARINKGGISRIVIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS-EIHLSVNEVPKPEINATLIAQS 119
I +++++PG+IIGK G ++++I+++L +T+ ++ +++ E+ +PEI+A ++A++
Sbjct: 61 LGKLIITIHTSKPGIIIGKGGGEVDRIKEELKKLTSKEDVQINILEIRRPEIDANIVAET 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA+Q+E R+ ++RA+K A+ +A+R GA+G+K+ GRL GAE++R+E +GRVPL T R
Sbjct: 121 IAKQIESRINYKRAIKMAIATALRMGAEGIKIKVGGRLGGAEIARSEEMKQGRVPLHTYR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
IDY + A T YG GIKV++ + + + D A +
Sbjct: 181 MDIDYASLFALTVYGKIGIKVWICKGEVLGERDLNPNAISAK 222
>gi|148927114|ref|ZP_01810744.1| ribosomal protein S3 [candidate division TM7 genomosp. GTL1]
gi|147887433|gb|EDK72877.1| ribosomal protein S3 [candidate division TM7 genomosp. GTL1]
Length = 209
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 86/207 (41%), Positives = 134/207 (64%), Gaps = 1/207 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLK-QAGVAKILIER 59
MGQK+NP RL VN W SRWFA EY L +D+K+R+ ++ K + + +I IER
Sbjct: 1 MGQKVNPTSMRLQVNKDWRSRWFAGKREYATWLAQDIKVRKLIEERFKSRPTINRIEIER 60
Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
+ I +++A+ G++IG+ G + +++ ++ + + I +++ EV +PE+ A L+A++
Sbjct: 61 SANLATITIHTAKAGVVIGRGGAGVSELKNQIEKIVDMPIRINIEEVKRPELAAKLVAEN 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA QLERR+ FRRA+K + + M GA G++V +GRLNGAE+SR E + G VPL TLR
Sbjct: 121 IAHQLERRINFRRAVKMSALNTMNAGAKGIRVEVAGRLNGAEMSRREKEIRGSVPLHTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRD 206
A IDY A A+T G G+KV++ +
Sbjct: 181 ADIDYHLAKAQTPAGIIGVKVWIYKGE 207
>gi|121720652|ref|YP_001001573.1| ribosomal protein S3 [Nuphar advena]
gi|122246080|sp|Q4FG72|RR3_NUPAD RecName: Full=30S ribosomal protein S3, chloroplastic
gi|69216139|gb|AAZ03897.1| ribosomal protein S3 [Nuphar advena]
gi|84682243|gb|ABC60497.1| ribosomal protein S3 [Nuphar advena]
Length = 218
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 79/218 (36%), Positives = 132/218 (60%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + S WFA+ Y L ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHRSFWFAQPKNYSKGLQEDEKIRDCIKNYVQKHMRISSGFEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I++ ++I + IE+++ +K + N +++++ VP+P
Sbjct: 61 ARIDIKKRIDLIQVIIHIGFANMLIEGRARGIEELQTNVQKSFHSVNRRLNIAIARVPRP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
++A+ IA QL+ RV FR+AMK+A++ A + A G++V +GRLNG E++R E
Sbjct: 121 YGQPNILAEYIALQLKNRVSFRKAMKKAIELAEQADAKGIQVQIAGRLNGNEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+R ID+ + T YG GIK+++ L +E
Sbjct: 181 EGRVPLQTIRVKIDHCSYPVRTIYGVLGIKIWIFLDEE 218
>gi|116617146|ref|YP_817521.1| ribosomal protein S3 [Coffea arabica]
gi|122153658|sp|A0A374|RR3_COFAR RecName: Full=30S ribosomal protein S3, chloroplastic
gi|116242202|gb|ABJ89717.1| ribosomal protein S3 [Coffea arabica]
Length = 218
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 74/218 (33%), Positives = 129/218 (59%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG +S WF + Y L ED +IR ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWFTQAKNYSEGLQEDQQIRNCIKNYVQKNTKISSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I++ P ++ + IE+++ +K N N + ++++ ++ KP
Sbjct: 61 ARIEIQKRIDLIQVIIFMGFPKPLLENQPRGIEELQTNLQKKCNSVNRKFNIAITKIAKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
N ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E
Sbjct: 121 YGNPNILAEYIAGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
GRVPLQT+RA IDY + T YG GIK+++ + +E
Sbjct: 181 RGRVPLQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDEE 218
>gi|114804302|ref|YP_762299.1| ribosomal protein S3 [Morus indica]
gi|122166767|sp|Q09WX9|RR3_MORIN RecName: Full=30S ribosomal protein S3, chloroplastic
gi|78100354|gb|ABB20995.1| ribosomal protein S3 [Morus indica]
Length = 215
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 76/215 (35%), Positives = 131/215 (60%), Gaps = 9/215 (4%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG +S WFA+ Y L ED KIR+ ++ ++K+ G+
Sbjct: 1 MGQKINPLGFRLGATQGHHSLWFAQPKNYSEDLQEDQKIRDCIKNYIKKNMKIFSSVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIG-KKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEI 111
A I I++ ++I+Y P L+I +K +++ +K N N ++++++ + P
Sbjct: 61 ACIEIQKRIDLIQVIIYMGFPKLLIEHQKIEELQMNIQKELNSVNRKLNMAITRIANPYG 120
Query: 112 NATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEG 171
+ ++A+ IA QL+ RV FR+AMK+A++ + G G+++ +GR++G E++R E EG
Sbjct: 121 HPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQIQIAGRIDGKEIARVEWIREG 180
Query: 172 RVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
RVPLQT++A IDY + T YG+ GIK+++ + +
Sbjct: 181 RVPLQTIKAKIDYCSYTVRTIYGALGIKIWIFVDE 215
>gi|42520524|ref|NP_966439.1| 30S ribosomal protein S3 [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|225630295|ref|YP_002727086.1| ribosomal protein S3 [Wolbachia sp. wRi]
gi|61215629|sp|Q73H92|RS3_WOLPM RecName: Full=30S ribosomal protein S3
gi|42410263|gb|AAS14373.1| ribosomal protein S3 [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|225592276|gb|ACN95295.1| ribosomal protein S3 [Wolbachia sp. wRi]
Length = 204
Score = 219 bits (558), Expect = 3e-55, Method: Composition-based stats.
Identities = 109/205 (53%), Positives = 148/205 (72%), Gaps = 2/205 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG +NP FRL + TW+S W+A Y LH+DL IR Y+ K AGV+K++IERT
Sbjct: 1 MGN-VNPKGFRLKIINTWSSIWYAE-KGYKQGLHQDLSIRSYINESFKHAGVSKVIIERT 58
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++S+RPG+IIGKKG+DIEKI++K++ + + ++V V + EI+A LI+ SI
Sbjct: 59 IDLVSVIIHSSRPGVIIGKKGSDIEKIKQKIAEKVKNNVEVNVVGVKRSEIDAVLISNSI 118
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQLE+RV FRRAMK+A+QS +R GA G+KV SGRL GAE++RTE Y EGR+PL TLRA
Sbjct: 119 AQQLEKRVSFRRAMKKAIQSCLRMGARGIKVSCSGRLGGAEIARTEWYKEGRLPLHTLRA 178
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLR 205
+IDY A A+T YG G+KV+V +
Sbjct: 179 NIDYAFAEAKTIYGIIGVKVWVYIG 203
>gi|37523490|ref|NP_926867.1| 30S ribosomal protein S3 [Gloeobacter violaceus PCC 7421]
gi|61215680|sp|Q7NEF8|RS3_GLOVI RecName: Full=30S ribosomal protein S3
gi|35214494|dbj|BAC91862.1| 30S ribosomal protein S3 [Gloeobacter violaceus PCC 7421]
Length = 247
Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 95/209 (45%), Positives = 138/209 (66%), Gaps = 1/209 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI RLG+ SRWFA+ EY ALL ED KIR Y+ L G+A + IER
Sbjct: 1 MGQKVHPIGLRLGIIRDHRSRWFAKAGEYPALLAEDHKIRAYIVKKLASGGIADVDIERK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS-EIHLSVNEVPKPEINATLIAQS 119
I + +ARPG+++G+ G I++++ L + +I ++V EV + + A LIA+
Sbjct: 61 ADQVEITIRTARPGVVVGRGGAGIDELKANLEKLIGRRQIRINVVEVQRVDAEAALIAEY 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
I QLERRV FRRA+++A+Q A R G G+KV+ +GRLNGAE++R+E EGR+PL TLR
Sbjct: 121 IVGQLERRVAFRRAVRQAIQRAQRAGVQGIKVMVAGRLNGAEIARSEWTREGRIPLHTLR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEV 208
A IDY +A+T YG+ G+KV++ + +
Sbjct: 181 ADIDYAYKIAQTTYGTLGVKVWIFRGEIL 209
>gi|159161200|ref|YP_001542486.1| ribosomal protein S3 [Ceratophyllum demersum]
gi|172048127|sp|A8SEE2|RR3_CERDE RecName: Full=30S ribosomal protein S3, chloroplastic
gi|148508483|gb|ABQ81490.1| ribosomal protein S3 [Ceratophyllum demersum]
gi|227481157|emb|CAP62536.1| ribosomal protein S3 [Ceratophyllum demersum]
Length = 218
Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 78/217 (35%), Positives = 131/217 (60%), Gaps = 11/217 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + S WFA+ Y L ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGATQSHRSFWFAQPKNYSDGLQEDEKIRDCIKNYVQKEMRISSGFEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I+Y P L+I + IE+++ +K N N +++ + V KP
Sbjct: 61 ARIGIQKRIDLIQVIIYIGFPNLLIEGRTRGIEELQSNVQKEFNSGNRRLNVVITRVAKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
++A+ IA QL++RV FR+AMK+A++ + G++V +GR++G E++R E
Sbjct: 121 YGQPNILAEYIAGQLKKRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
EGRVPLQT+RA ID+ + + T YG GIK+++ + +
Sbjct: 181 EGRVPLQTIRAKIDHCSYMVRTIYGVLGIKIWIFVDE 217
>gi|242624274|ref|YP_003002192.1| 30S ribosomal protein S3 [Aureoumbra lagunensis]
gi|239997382|gb|ACS36904.1| 30S ribosomal protein S3 [Aureoumbra lagunensis]
Length = 213
Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 96/213 (45%), Positives = 137/213 (64%), Gaps = 5/213 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRL S WF S Y LL +D KIRE++ AG+A I IERT
Sbjct: 1 MGQKVHPSGFRLNTTQKHKSTWFTSLSNYSKLLEQDFKIREFIVKQYDLAGIADIEIERT 60
Query: 61 HKNCRI--IVYSARPGLIIGKKGTDIEKIRKKLSNMTN--SEIHLSVNEVPKPEINATLI 116
+K I +Y A+PG+IIG+ G+ + + K+L ++I++ V EV +P+ ++ L+
Sbjct: 61 YKLNNIFVKIYVAKPGVIIGESGSGLLDLNKQLKKRLKSVNKINIDVFEVAEPDSHSILL 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMR-FGADGVKVIASGRLNGAELSRTECYLEGRVPL 175
AQ IA QL RRV F+RA+++A++ A G+KV SGRLNGAE++R+E EGR+PL
Sbjct: 121 AQFIANQLVRRVAFKRAVRKAIERAQALDNIQGIKVQISGRLNGAEIARSEWVKEGRMPL 180
Query: 176 QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208
QTLRA+IDY TA A+T YG GIKV++ + +
Sbjct: 181 QTLRANIDYATASAKTIYGIIGIKVWLFKGESI 213
>gi|221632972|ref|YP_002522195.1| 30S ribosomal protein S3 [Thermomicrobium roseum DSM 5159]
gi|254764555|sp|B9KZY1|RS3_THERP RecName: Full=30S ribosomal protein S3
gi|221156704|gb|ACM05831.1| ribosomal protein S3 [Thermomicrobium roseum DSM 5159]
Length = 223
Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 98/218 (44%), Positives = 147/218 (67%), Gaps = 1/218 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARG-SEYGALLHEDLKIREYLQCHLKQAGVAKILIER 59
MG+K+NPI FRLG+ W S+WFA +Y LHEDL IRE + L +AG+++I I+R
Sbjct: 1 MGRKVNPIGFRLGIVHDWESKWFAEKDRQYREQLHEDLDIRELVHRELPRAGISRIEIQR 60
Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
+ +++A+PG++IGK+G ++E++R+ L + ++HL++ E+ KPE++A L+A+S
Sbjct: 61 AVNRVDVTIHTAKPGVVIGKQGANVERLRQLLESRIGKKVHLNIQEIRKPELDARLVAES 120
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA+Q+ RRV +RRAMK A +AMR GA GVK+ GRL GAE+ R + GRVPL T+R
Sbjct: 121 IAEQITRRVSYRRAMKHAAAAAMRAGAKGVKIRVKGRLGGAEMKRMVWEIVGRVPLNTIR 180
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
A+IDY A T YG G+KV++ D + ++ I A
Sbjct: 181 ANIDYAVVHAPTIYGQIGVKVWIYHGDVLPEARPPIAA 218
>gi|3122826|sp|O31161|RS3_SPICI RecName: Full=30S ribosomal protein S3
gi|2623862|gb|AAC35870.1| ribosomal protein S3 [Spiroplasma citri]
Length = 252
Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 94/234 (40%), Positives = 141/234 (60%), Gaps = 7/234 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+GV TW+SRW+A EY LH+D+KIR+ L LK A V+KI IERT
Sbjct: 1 MGQKVSPTGLRVGVIKTWDSRWYAEKQEYVKWLHQDIKIRKALMKELKGASVSKIEIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLS---NMTNSEIHLSVNEVPKPEINATLIA 117
K I + +AR G+++G++G +I K+ K + E+ ++V E+ P+ +A L+A
Sbjct: 61 KKEIVIFIRTARVGVVLGQEGKNIAKLVKLVHITIGDRKMEVKINVVEIKNPDTDAQLVA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+IA+Q+ R FR K A++ AM+ GA G+K SGRL G +++RTE Y +G VPL T
Sbjct: 121 NTIAEQIVNRASFRSVQKLAIKKAMKAGAQGIKTSVSGRLGGVDMARTEGYTKGTVPLAT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRD----EVSDSDSTIPAAEHRVVEKDS 227
LR+ ID+ A A T YG G+KV++ + E+ + P E R + +
Sbjct: 181 LRSDIDFALAEALTTYGQIGVKVWICKGEILSKELVSTSDEKPKFEKRDFNRSN 234
>gi|124302945|ref|YP_001023740.1| ribosomal protein S3 [Angiopteris evecta]
gi|152060528|sp|A2T372|RR3_ANGEV RecName: Full=30S ribosomal protein S3, chloroplastic
gi|110628343|gb|ABG79639.1| ribosomal protein S3 [Angiopteris evecta]
Length = 218
Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats.
Identities = 83/218 (38%), Positives = 129/218 (59%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ--------AGV 52
MGQKINP+ FR+GV S WFA+ Y L ED K+R ++ ++++ G+
Sbjct: 1 MGQKINPLGFRVGVTQQHYSYWFAQPKNYSKFLEEDEKVRTCIEKYVQKQIKNSSNYGGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE---IHLSVNEVPKP 109
A+I IE +I +Y+ P ++ + G I+K+R + N+ + I +++ V +P
Sbjct: 61 ARIEIEGKTDLLQIEIYTGFPDSLVEENGLGIDKLRTNIENLLKKKSQKIQITLKNVLQP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
++A+ IA QLE RV FRR +K+A++ A + G+K+ +GRLNG E++R E
Sbjct: 121 YGEPRILAEHIALQLENRVAFRRTVKKAIELAKKTDIKGIKIQIAGRLNGNEIARVEWVR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RAHI+Y A+T YG GIK++V +E
Sbjct: 181 EGRVPLQTIRAHINYCYYPAQTIYGVLGIKIWVFRDEE 218
>gi|326200318|gb|ADZ52357.1| ribosomal protein S3 [Asclepias syriaca]
Length = 218
Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats.
Identities = 77/218 (35%), Positives = 133/218 (61%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG +S WFA+ Y L ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQVHHSLWFAQPKNYLEGLQEDQKIRDCIKNYVQKNMKNNSGLDGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
+I I++ ++I++ P L++ + +E+++ +K N N ++++++ +PKP
Sbjct: 61 TRIEIQKRIDLIQVIIFMGFPKLLLESRPRGVEELQTTLQKEFNCMNRKLNIAIKRIPKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
N ++A+ IA+QL+ RV FR+AMK+A++ + G+KV +GR++G E++R E
Sbjct: 121 YGNPKILAEFIARQLKNRVSFRKAMKKAIELTGQADTKGIKVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY + T +G GIK+++ + E
Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIHGVLGIKIWIFIDKE 218
>gi|290487088|gb|ADD29928.1| ribosomal protein S3 [Dillenia indica]
Length = 218
Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats.
Identities = 78/216 (36%), Positives = 125/216 (57%), Gaps = 11/216 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG +S WF + Y L ED KIR ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQGHHSIWFTQPKNYSEDLQEDQKIRNCIKNYVQKNMRISSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK---IRKKLSNMTNSEIHLSVNEVPKP 109
A I I++ +II+Y P L+I + IE+ +K N N +++++V + KP
Sbjct: 61 AHIEIKKKIDLIQIIIYMGFPKLLIEGRPRGIEELEMNVQKELNCINKKLNIAVARITKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ ++A+ IA QL+ RV FR+AMK+A++ + G+++ +GR++G E++R E
Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAMKKAIELTKQADIKGIQIQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
EGRVPLQT+RA IDY T YG GIK+++ +
Sbjct: 181 EGRVPLQTIRAKIDYCPYTVRTIYGVLGIKIWIFVG 216
>gi|50346822|ref|YP_053193.1| ribosomal protein S3 [Nymphaea alba]
gi|68052952|sp|Q6EW13|RR3_NYMAL RecName: Full=30S ribosomal protein S3, chloroplastic
gi|50250367|emb|CAF28633.1| ribosomal protein S3 [Nymphaea alba]
Length = 218
Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats.
Identities = 77/218 (35%), Positives = 131/218 (60%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + S WFA+ Y L ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHRSFWFAQPKNYSKGLQEDEKIRDCIKNYVQKHMRISSGFEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I++ +++ + IE+++ +K + N +++++ V +P
Sbjct: 61 ARIDIKKRIDLIQVIIHIGFANMLMEGRARGIEELQTNVQKSFHSVNRRLNIAIARVARP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
++A+ IA QL+ RV FR+AMK+A++ A + A G++V +GRLNG E++R E
Sbjct: 121 YGQPNILAEYIALQLKNRVSFRKAMKKAIELAEQADAKGIQVQIAGRLNGNEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+R ID+ + T YG GIK+++ L +E
Sbjct: 181 EGRVPLQTIRVKIDHCSYPVRTIYGVLGIKIWIFLDEE 218
>gi|325108621|ref|YP_004269689.1| 30S ribosomal protein S3P [Planctomyces brasiliensis DSM 5305]
gi|324968889|gb|ADY59667.1| SSU ribosomal protein S3P [Planctomyces brasiliensis DSM 5305]
Length = 233
Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats.
Identities = 99/230 (43%), Positives = 146/230 (63%), Gaps = 3/230 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK P FR+G+ W SRW+A E+G LL ED+KIR +++ AG+AK+ IERT
Sbjct: 1 MGQKTRPTGFRVGIVEDWRSRWYAPKREFGTLLVEDVKIRNFIKKKYGFAGIAKVEIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ + ++S+RPG+IIG+KG +I++++ +L MT + + + E+ P +A L+A+ I
Sbjct: 61 RDHVNVNLHSSRPGVIIGRKGQEIDRLKAELEEMTGRRMEIKIVEMNNPFRSAILVAEDI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
AQQL +R FRRA+KR+++ M GA GVK+ SGRL GAE+SR E G +PL TL+
Sbjct: 121 AQQLGKRGSFRRALKRSMEQVMDAGAHGVKIELSGRLGGAEMSRKEKGSRGSIPLSTLQR 180
Query: 181 HIDYGTAVAETAYGSCGIKVYV---SLRDEVSDSDSTIPAAEHRVVEKDS 227
H+DYG A TA G GIKV++ + DE S+ + A++ K S
Sbjct: 181 HVDYGYTTARTAQGIIGIKVWIDLGNYSDEESNDGADAQASKASKKPKRS 230
>gi|290487110|gb|ADD29939.1| ribosomal protein S3 [Bulnesia arborea]
Length = 215
Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats.
Identities = 82/214 (38%), Positives = 129/214 (60%), Gaps = 11/214 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG+ + +S WFA+ Y L ED KIR+ +Q ++++ G+
Sbjct: 1 MGQKINPLGFRLGITQSHHSIWFAQPKNYSEGLQEDKKIRDCIQNYIQKNMKISSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK---IRKKLSNMTNSEIHLSVNEVPKP 109
A I I++ +II+Y P L+I + IE+ KK + N +I++++ + P
Sbjct: 61 ACIEIQKRIDLIQIIIYMGFPKLLIKGRSQKIEELQTNIKKEIHCVNRKINIAIKRISNP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ ++A+ IA QL+ RV FR+AMK+A++ + + G+KV +GRL+G E++R E
Sbjct: 121 YGHPKILAEFIAGQLKNRVSFRKAMKKAIELSEQTDTKGIKVQIAGRLDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
EGRVPLQT+RA IDY + T YG GIK+++
Sbjct: 181 EGRVPLQTIRAPIDYCSYTVRTIYGVLGIKIWIF 214
>gi|228470719|ref|ZP_04055570.1| ribosomal protein S3 [Porphyromonas uenonis 60-3]
gi|228307576|gb|EEK16572.1| ribosomal protein S3 [Porphyromonas uenonis 60-3]
Length = 249
Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats.
Identities = 99/223 (44%), Positives = 140/223 (62%), Gaps = 2/223 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RLG W+S WF G YG L ED +IR+YL L A V++I+IER
Sbjct: 1 MGQKINPIANRLGYIRGWDSNWF-GGRNYGDTLVEDDRIRKYLHTRLSGALVSRIIIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119
K I + +ARPG+I+GK G ++E ++ +L +T I +++ EV KPE++A ++A
Sbjct: 60 LKVVTITICTARPGMIVGKGGQNVENLKAELKKVTKADNIQINIYEVRKPEVDAVIVAND 119
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA++LE R+ +RR +K A+ +AMR GA+G+K+ SGRLN AE++R E Y EGR PL TLR
Sbjct: 120 IARKLEGRMSYRRTVKMAIANAMRAGAEGIKIQLSGRLNNAEMARAELYKEGRTPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
A IDY A T G G+KV++ + D ++ R
Sbjct: 180 ADIDYAQTGALTKVGMIGVKVWIMNGEVYERRDLAPDLSQPRR 222
>gi|326909430|ref|YP_004327700.1| ribosomal protein S3 [Hevea brasiliensis]
gi|308523544|gb|ADO33594.1| ribosomal protein S3 [Hevea brasiliensis]
Length = 218
Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats.
Identities = 78/215 (36%), Positives = 128/215 (59%), Gaps = 11/215 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + +S WFA+ Y L ED KIR ++ ++K+ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFAQPKNYSEGLQEDQKIRNCIKNYVKKNAKISSGIEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I+Y L+I + IE+++ +K N N ++++++ + P
Sbjct: 61 ARIEIQKRIDVIQVIIYMGFQKLLIESRPKRIEELQMNVQKELNCVNRKLNITITRITNP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ T++A+ IA QL+ RV FR+AMK+A++ + G++V +GRL+G E++R E
Sbjct: 121 YGHPTILAEFIAGQLKNRVSFRKAMKKAIELTEQTDTKGIQVQIAGRLDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
EGRVPLQT+ A IDY + T YG GIK+++
Sbjct: 181 EGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWIFP 215
>gi|126680565|gb|ABO26502.1| ribosomal protein S3 [Candidatus Phytoplasma prunorum]
Length = 245
Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats.
Identities = 85/215 (39%), Positives = 130/215 (60%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ W+S+WFA + +HED IR + + ++ ++KI IER+
Sbjct: 1 MGQKSNPNGLRLGIIKDWDSKWFANFKKTPQFIHEDFCIRNLINKNYSKSLISKIEIERS 60
Query: 61 HKNCRI----IVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K + ++ + +I GK ++KI K++ +T E+ L+V E+ P+ A L+
Sbjct: 61 KKKDKEIIKINLHVVKINIINGKDNELLKKITKQIEQITKKEVVLNVIEIKNPDKVAILV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
A+++A+QLE+R FRR K A+Q ++ G GVK + SGRL G E++R+ YLEGRVPL
Sbjct: 121 AKTMAEQLEQRFYFRRVQKMAIQRVLKTGVKGVKTLISGRLGGLEMARSXGYLEGRVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA ++Y A A T YGS G+KV++ D +
Sbjct: 181 TLRADVEYAFAEAHTTYGSFGVKVWIFHGDVLPGE 215
>gi|197294149|ref|YP_002149770.1| ribosomal protein S3 [Cicer arietinum]
gi|197089837|gb|ACH41107.1| ribosomal protein S3 [Cicer arietinum]
Length = 218
Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats.
Identities = 79/218 (36%), Positives = 132/218 (60%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKI+P+ FRLG + +S WFA+ Y L ED IR+ ++ ++++ G+
Sbjct: 1 MGQKIHPLGFRLGTTQSHDSIWFAQPRNYSENLKEDKIIRDCIKNYIQKTIRISSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
+I I++ ++I+Y P L++ K IE+++ KK N N +I++++ +P
Sbjct: 61 GRIKIKKRIDLIQVIIYMGLPKLLLEGKPRRIEELQINVKKKLNCVNRKINIAITRIPNA 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ ++A+ IA QL+ R+ FR+A+K+A++ A + G G++V +GR++G E++R E
Sbjct: 121 YRDPNILAEFIAGQLKNRISFRKAIKKAIELAEQAGTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY + T YG GIKV++ L E
Sbjct: 181 EGRVPLQTIRAKIDYCSYPVRTIYGVLGIKVWIFLNKE 218
>gi|219674013|ref|YP_002456497.1| ribosomal protein S3 [Trifolium subterraneum]
gi|193788982|gb|ACF20578.1| ribosomal protein S3 [Trifolium subterraneum]
Length = 213
Score = 217 bits (554), Expect = 7e-55, Method: Composition-based stats.
Identities = 78/211 (36%), Positives = 125/211 (59%), Gaps = 6/211 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P+ FRLG +S WFA+ +Y L ED IR+ ++ +L++ I R
Sbjct: 1 MGQKIHPLGFRLGTTQNHDSIWFAKPRDYSENLKEDKIIRDCIKNYLQKTSSGVEGIGRI 60
Query: 61 HKNCRII---VYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINAT 114
RI +Y P L I + IE+++ +K N N +I++++ +P +
Sbjct: 61 KIKKRIDLIQIYVGLPKLFIEGEPRRIEELQTNVQKKLNCVNRKINIAITRIPNVYRDPN 120
Query: 115 LIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVP 174
++A+ IA QL+ R+ FR+A+++A++ A + G GV+V SGR++G E++R E + EGRVP
Sbjct: 121 ILAEFIAGQLKNRIPFRKAIQKAIELAEQAGTKGVQVQISGRIDGKEIARVEWFREGRVP 180
Query: 175 LQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
LQT+RA +DY + T YG GIKV++ L
Sbjct: 181 LQTIRAKMDYCSYPVRTIYGVLGIKVWIFLN 211
>gi|126662258|ref|ZP_01733257.1| 30S ribosomal protein S3 [Flavobacteria bacterium BAL38]
gi|126625637|gb|EAZ96326.1| 30S ribosomal protein S3 [Flavobacteria bacterium BAL38]
Length = 253
Score = 217 bits (553), Expect = 9e-55, Method: Composition-based stats.
Identities = 102/227 (44%), Positives = 153/227 (67%), Gaps = 1/227 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ W+S W+ G++YG + ED KIR+Y+ L +A V+KI+IERT
Sbjct: 10 MGQKTNPIGNRLGIIRGWDSNWY-GGNDYGDKIAEDYKIRKYIHARLSKASVSKIIIERT 68
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + + +ARPG+IIGK G +++K++++L +T+ E+ +++ E+ +PEI+A L+ SI
Sbjct: 69 LKLVTVTITTARPGIIIGKGGQEVDKLKEELKKITDKEVQINIFEIKRPEIDAYLVGTSI 128
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E R+ +RRA+K A+ +AMR A+G+KV SGRLNGAE++R+E + EGR+PL T RA
Sbjct: 129 ARQIESRISYRRAIKMAIAAAMRMNAEGIKVQISGRLNGAEMARSENFKEGRIPLSTFRA 188
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
IDY A A T YG GIKV++ + D + + K S
Sbjct: 189 DIDYSLAEAHTTYGRMGIKVWIMKGEVYGKRDLSPLVGMDKQKSKPS 235
>gi|91214179|ref|YP_538803.1| ribosomal protein S3 [Glycine max]
gi|91207777|sp|Q2PMP7|RR3_SOYBN RecName: Full=30S ribosomal protein S3, chloroplastic
gi|83595780|gb|ABC25161.1| ribosomal protein S3 [Glycine max]
Length = 216
Score = 217 bits (553), Expect = 9e-55, Method: Composition-based stats.
Identities = 80/216 (37%), Positives = 129/216 (59%), Gaps = 11/216 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + +S WFA+ + Y + ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHDSIWFAQPTNYSENIQEDKKIRDCIKNYIQKNIRISSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK---IRKKLSNMTNSEIHLSVNEVPKP 109
+I I++ ++I+Y P L+I K IE+ +K N N ++++++ +V
Sbjct: 61 GQIKIQKRIDLIQVIIYMGFPKLLIEGKSQKIEELQTNMQKKLNCVNRKLNIAIVKVANA 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ +IA+ IA QL+ RV FR+AMK+A++ + G GV+V +GR++G E++R E
Sbjct: 121 YKHPNIIAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGVQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
EGRVPLQT+RA IDY T YG GIKV++ +
Sbjct: 181 EGRVPLQTIRAKIDYCCYTVRTIYGVLGIKVWIFSK 216
>gi|156598335|gb|ABU85428.1| ribosomal protein S3 [Musa acuminata]
Length = 218
Score = 217 bits (553), Expect = 9e-55, Method: Composition-based stats.
Identities = 78/218 (35%), Positives = 129/218 (59%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQRHHSFWFAQPKNYSVGLQEDEKIRNCIKNYVQKNRRISSGFEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT---NSEIHLSVNEVPKP 109
A+I I++ ++I+Y P L+I + IE+++ + N +++++ V KP
Sbjct: 61 ARIGIKKRIDLIQVIIYIGFPNLLIEGQTRGIEELQMNVEKEFHSVNRRLNIAITRVEKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
++A+ IA QL+ RV FR+AMK+A++ A + G++V +GR++G E++R E
Sbjct: 121 YGQPNILAEYIALQLKNRVSFRKAMKKAIELAEQTDTKGMQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA ID+ + T YG GIK+++ + +E
Sbjct: 181 EGRVPLQTIRAKIDHCSYTIRTIYGVLGIKIWIFVDEE 218
>gi|296126871|ref|YP_003634123.1| ribosomal protein S3 [Brachyspira murdochii DSM 12563]
gi|296018687|gb|ADG71924.1| ribosomal protein S3 [Brachyspira murdochii DSM 12563]
Length = 245
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 98/243 (40%), Positives = 138/243 (56%), Gaps = 17/243 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ----------- 49
MGQK++PI RLG+N TW+S+WF Y LHEDL IR Y+ + +
Sbjct: 1 MGQKVSPIGLRLGINKTWSSKWFEDSRTYADSLHEDLSIRRYIMNYYYKTLKEEQKKIGG 60
Query: 50 ------AGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSV 103
++ I I R I + +AR G++IG KG +E ++ + M +H S+
Sbjct: 61 KKESFDPAISDIQIVRFPDRINIFISTARAGVVIGPKGQRVETVKTAVQKMVKKPVHFSI 120
Query: 104 NEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELS 163
E+ E++A L AQS+A+QLE RV FRRAMK + AM+ GA G+KV+ SGRL GA+++
Sbjct: 121 TEIRDAELDAALAAQSVARQLEMRVAFRRAMKSVITQAMKKGAKGIKVMCSGRLAGADIA 180
Query: 164 RTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223
RTE Y G VPL TLRA+IDYGTA A T +G GIKV++ + + + A +
Sbjct: 181 RTEQYKNGSVPLHTLRANIDYGTAEALTTFGIIGIKVWIYKGEILDKKEHKQDDAGKVIS 240
Query: 224 EKD 226
K
Sbjct: 241 AKG 243
>gi|154249811|ref|YP_001410636.1| ribosomal protein S3 [Fervidobacterium nodosum Rt17-B1]
gi|189045006|sp|A7HM46|RS3_FERNB RecName: Full=30S ribosomal protein S3
gi|154153747|gb|ABS60979.1| ribosomal protein S3 [Fervidobacterium nodosum Rt17-B1]
Length = 209
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 94/208 (45%), Positives = 145/208 (69%), Gaps = 2/208 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG+ W+++WF Y L ED IR +++ + QAG+A++ ++R
Sbjct: 1 MGQKVHPKGFRLGLTSEWDAQWFNEKK-YSEYLLEDEAIRNFIKKNYNQAGIARVFVQRP 59
Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
+ + +Y+ARPG++IGKKG I ++R+ L N + + + E+ PE A+L+A+S
Sbjct: 60 DAERVLVSIYAARPGILIGKKGAGITELRQALEANFNRKFGIDIIELKTPETEASLVAES 119
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IAQ++E+R ++ MKRA+ +A+R GA G+K++ SGRL GAE++RTE YL+GR+PLQTLR
Sbjct: 120 IAQKIEKRASYKIVMKRAITAALRRGARGIKIMVSGRLAGAEIARTEWYLKGRLPLQTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDE 207
+ IDY TA AET YG+ GIKV++ D+
Sbjct: 180 SVIDYSTARAETKYGTIGIKVWIYKGDQ 207
>gi|122894028|ref|YP_001004224.1| ribosomal protein S3 [Ranunculus macranthus]
gi|122239703|sp|Q4FG71|RR3_RANMC RecName: Full=30S ribosomal protein S3, chloroplastic
gi|69216141|gb|AAZ03898.1| ribosomal protein S3 [Ranunculus macranthus]
gi|85540842|gb|ABC70794.1| ribosomal protein S3 [Ranunculus macranthus]
Length = 217
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 74/217 (34%), Positives = 129/217 (59%), Gaps = 10/217 (4%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + +S WFA+ Y L ED KI++ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHHSVWFAQPKNYSGGLQEDKKIKDCIKNYVQKNRKISSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKG--TDIEKIRKKLSNMTNSEIHLSVNEVPKPE 110
A+I I++ ++I+Y P + G +++ +K N N ++++++ + KP
Sbjct: 61 ARIKIKKRIDLIQVIIYMGFPKFLEGNPQGIEELQSNIQKEFNSVNQKLNIAITRIAKPY 120
Query: 111 INATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLE 170
++A+ IA QL+ RV FR+AMK+A++ + G+++ +GR++G E++R E E
Sbjct: 121 GQPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARVEWIRE 180
Query: 171 GRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
GRVPLQT+RA IDY + T YG+ GIK+++ +E
Sbjct: 181 GRVPLQTIRAKIDYCSYTVRTIYGALGIKIWIFAGEE 217
>gi|156618861|ref|YP_001430142.1| ribosomal protein S3 [Cuscuta reflexa]
gi|171769792|sp|A7M9A1|RR3_CUSRE RecName: Full=Plastid 30S ribosomal protein S3
gi|156556046|emb|CAM98429.1| ribosomal protein S3 [Cuscuta reflexa]
Length = 216
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 74/214 (34%), Positives = 130/214 (60%), Gaps = 11/214 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG +S WF++ Y L ED KIR+++ ++K+ G+
Sbjct: 1 MGQKINPLGFRLGTTQDHHSLWFSQPKNYSESLQEDKKIRDFINNYVKKNMRKASGAEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ +++++ P +I + IE+++ +K N N ++++++ + KP
Sbjct: 61 ARISIQKRIDLIQVVIFMGFPKFLIETRPQGIEELQRTLQKEFNCGNQKLNITITRIEKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
N ++A+ IA QL+ RV FR+A+K+A++ A + G++V +GR++G E++R E
Sbjct: 121 YGNPNILAEFIAVQLKNRVSFRKAIKKAIELAEQADTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
EGRVP QT+RA++DY + T YG GIK+++
Sbjct: 181 EGRVPRQTIRANLDYSSYPVRTIYGVLGIKIWIF 214
>gi|269115067|ref|YP_003302830.1| 30S ribosomal protein S3 [Mycoplasma hominis]
gi|268322692|emb|CAX37427.1| 30S ribosomal protein S3 [Mycoplasma hominis ATCC 23114]
Length = 243
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 79/230 (34%), Positives = 130/230 (56%), Gaps = 4/230 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FR G+ + N+ W+A ++ L ED KI ++ +++ + K+ I+R
Sbjct: 1 MGQKVNPNGFRYGITKSHNTTWYADKDKFATYLLEDQKIYDFFDKKVREYLIGKVQIKRD 60
Query: 61 HKNCRI-IVYSARPGLIIGKKGTDIEKIRKKLSNMTNS---EIHLSVNEVPKPEINATLI 116
I +++A+P +G G +++ + +L + +I + V E+ P++NA L+
Sbjct: 61 QAGHTIVYIHTAKPAAFLGTNGENVKALTAQLKKVIAKKQADITIEVIELKNPDLNARLL 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
A+ IA +LE R FR A K A+++A++ GA G+K +GRLNG +++RTE Y EG + L
Sbjct: 121 AEGIAIKLENRGSFRLAQKFAIKAALKAGAKGIKTSVAGRLNGVDMARTEGYTEGEMKLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
TLR +DY A T YG G+KV+VSL + +S S E +
Sbjct: 181 TLRQDVDYAVTTALTTYGILGVKVWVSLGEILSPKTSEAEVKEAPRKRES 230
>gi|289065128|ref|YP_003434014.1| ribosomal protein S3 [Typha latifolia]
gi|69216143|gb|AAZ03899.1| ribosomal protein S3 [Typha latifolia]
gi|281371811|gb|ADA63738.1| ribosomal protein S3 [Typha latifolia]
Length = 218
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 77/218 (35%), Positives = 130/218 (59%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + +S WFA+ Y A L ED KIR ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHHSFWFAQPKNYSAGLQEDEKIRNCIKNYVQKNRRISSGFEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT---NSEIHLSVNEVPKP 109
A+I I++ ++I++ P L+I + IE+++ + N +++++ V KP
Sbjct: 61 ARIGIQKKIDLIQVIIHIGFPNLLIEGQTRGIEELQINVQKEFYSVNRRLNIAITRVEKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
++++ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E
Sbjct: 121 YGQPNILSEYIALQLKNRVSFRKAMKKAIELTEQTDTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA ID+ + T YG GIK+++ + DE
Sbjct: 181 EGRVPLQTIRAKIDHCSYTIRTIYGVLGIKIWIFVDDE 218
>gi|156597985|gb|ABU85259.1| ribosomal protein S3 [Cycas micronesica]
Length = 218
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 78/218 (35%), Positives = 126/218 (57%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL--------KQAGV 52
MGQK+NP+ FRLG+ S WFA+ Y L ED KIR + ++ G+
Sbjct: 1 MGQKMNPLGFRLGITQNHRSHWFAQQKNYSEDLREDEKIRNCIVNYIRRHMRSSSNHGGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKP 109
A++ I R ++ ++ P L+I +G IE++R + NM N ++++++ +V KP
Sbjct: 61 ARVEIRRKIDLIQVEIHIGFPNLLIENRGRGIEQLRTDVRNMLNPVDRKLNIAIVKVAKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
++A+ IA QLE RV R +KRA++ A + G+++ +GRL+G E++R E
Sbjct: 121 YGEPNILAEFIALQLEDRVSLGRTVKRAIELAEQADIKGIQIQIAGRLDGNEIARVEWAR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA ID+ A+T YG GIK+++ ++
Sbjct: 181 EGRVPLQTIRAKIDHCYYPAQTIYGVLGIKIWIFGDEK 218
>gi|169142826|ref|YP_001687250.1| ribosomal protein S3 [Aneura mirabilis]
gi|153973852|gb|ABS54512.1| ribosomal protein S3 [Aneura mirabilis]
Length = 218
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 81/218 (37%), Positives = 126/218 (57%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG+ S WFA +EY L D +IR ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGITQNHRSYWFAEPNEYSGLCEGDERIRNCIKSYVREHIRNSSNYGGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK---IRKKLSNMTNSEIHLSVNEVPKP 109
I IER RI +++ P L++ + +++ + + N + LS+ E+PKP
Sbjct: 61 THIGIERKTDLIRIEIHTGFPALLVENRNRGMDQLKINVQSTLDPVNKRLGLSLVEIPKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
++A+ IA QLE RV RR +++A++ A + +G+K+ SGRLNGAE++R E
Sbjct: 121 YGEPNILAEYIALQLENRVASRRTVRKAIELAKKGDVEGIKIQISGRLNGAEMARVEWAR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVP QT+RA I+Y A+T YG GIKV++ +E
Sbjct: 181 EGRVPSQTIRARINYCYYAAQTVYGVLGIKVWIFKNEE 218
>gi|313887086|ref|ZP_07820785.1| ribosomal protein S3 [Porphyromonas asaccharolytica PR426713P-I]
gi|312923497|gb|EFR34307.1| ribosomal protein S3 [Porphyromonas asaccharolytica PR426713P-I]
gi|332176627|gb|AEE12317.1| ribosomal protein S3 [Porphyromonas asaccharolytica DSM 20707]
Length = 248
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 99/218 (45%), Positives = 140/218 (64%), Gaps = 3/218 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RLG W+S W+ G YG L ED +IR+YL L A V++I+IER
Sbjct: 1 MGQKINPIANRLGYIRGWDSNWY-GGRNYGDTLVEDDRIRKYLHTRLSGALVSRIIIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQS 119
K I + +ARPG+I+GK G ++E ++ +L +T I +++ EV KPE++A ++A
Sbjct: 60 LKVITITICTARPGMIVGKGGQNVENLKAELKKVTKADNIQINIYEVRKPEVDAVIVAND 119
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA++LE R+ +RR +K A+ +AMR GA+G+K+ SGRLN AE++R+E Y EGR PL TLR
Sbjct: 120 IARKLEGRMSYRRTVKMAIANAMRAGAEGIKIQLSGRLNNAEMARSELYKEGRTPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
A IDY A T G G+KV++ EV + P
Sbjct: 180 ADIDYAQTGALTKVGMIGVKVWIM-NGEVYERRDLAPD 216
>gi|260424860|ref|ZP_05779019.1| ribosomal protein S3 [Dialister invisus DSM 15470]
gi|260403417|gb|EEW96964.1| ribosomal protein S3 [Dialister invisus DSM 15470]
Length = 248
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 97/218 (44%), Positives = 143/218 (65%), Gaps = 1/218 (0%)
Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVY 69
R+GV W+S+WFA +Y ALL ED KIR++L+ HL AG++KI I+R +I +Y
Sbjct: 1 MRVGVINDWDSKWFAE-KDYAALLVEDAKIRQFLKKHLFVAGISKIGIKRVGTRIKIAIY 59
Query: 70 SARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV 129
+A+PG++IG+ GT IE I+K L+ +T+ E+ + + E+ +++A L+ + IA QLERR+
Sbjct: 60 TAKPGMVIGRGGTGIEDIKKALAAVTDKEVDIDILEIKSKDMSAILVGEDIASQLERRIG 119
Query: 130 FRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189
FRRA+K+AV MR GA G+KV SGRL GAE++R+E Y EG +PLQTLRA+IDY A A
Sbjct: 120 FRRAVKQAVGRTMRMGAKGIKVTVSGRLGGAEIARSESYREGSIPLQTLRANIDYAVATA 179
Query: 190 ETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
T YG+ GIKV++ + ++ +
Sbjct: 180 HTTYGAIGIKVWIYKGELAPGQTVDENENIRTSKDRGN 217
>gi|290487116|gb|ADD29942.1| ribosomal protein S3 [Ficus sp. Moore 315]
Length = 215
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 75/215 (34%), Positives = 130/215 (60%), Gaps = 9/215 (4%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGATQGHHSLWFAQRKNYSEDLQEDQKIRNCIKNYVQKNMKISSSVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIG-KKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEI 111
A I I++ ++I+Y P L+I +K +++ +K N N ++++++ + P
Sbjct: 61 ACIEIQKRIDLIQVIIYMGFPKLLIEHQKIEELQLNIQKELNSVNRKLNIAITRIANPYG 120
Query: 112 NATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEG 171
+ ++A+ IA QL+ RV FR+AMK+A++ + G G+++ +GR++G E++R E EG
Sbjct: 121 HPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGIQIQIAGRIDGKEIARVEWIREG 180
Query: 172 RVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
RVPLQT+RA I+Y + T YG+ GIK+++ + +
Sbjct: 181 RVPLQTIRAKINYCSYTVRTIYGALGIKIWIFVDE 215
>gi|108796747|ref|YP_636490.1| ribosomal protein S3 [Zygnema circumcarinatum]
gi|91207779|sp|Q32RN6|RR3_ZYGCR RecName: Full=30S ribosomal protein S3, chloroplastic
gi|61393731|gb|AAX45873.1| ribosomal protein S3 [Zygnema circumcarinatum]
Length = 236
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 83/236 (35%), Positives = 136/236 (57%), Gaps = 21/236 (8%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ--------AGV 52
MGQKI+P+ FRLGV +S WFA + Y LL ED +IR +Q ++++ A +
Sbjct: 1 MGQKIHPLGFRLGVTQNHHSTWFAPLNNYSELLKEDERIRNCIQQYVRKYVRSSSRSAEI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTD------------IEKIRKKLSNMTNSEIH 100
A++ I++ + +++A P L++ + + + + + N N +++
Sbjct: 61 ARVQIQKKTDLVEVQIHTASPSLLVQTRVPNRSTNTQEIGIEYLRRNIQNTLNPGNRKLN 120
Query: 101 LSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGA-DGVKVIASGRLNG 159
+++++V KP A ++A+ IA QLE RV FR+ MK+A++ A + G G+K+ +GRLNG
Sbjct: 121 MTLSQVAKPYGEAIILAEYIALQLESRVAFRKTMKQAIKLANKSGNARGIKIQIAGRLNG 180
Query: 160 AELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
AE++R E EGRVPL TLRA IDY A+T YG GIKV+V + ++ +
Sbjct: 181 AEIARVEWAREGRVPLHTLRAQIDYCHYPAQTIYGVLGIKVWVFQNKSLISNNQQM 236
>gi|254492318|ref|ZP_05105491.1| ribosomal protein S3 [Methylophaga thiooxidans DMS010]
gi|224462490|gb|EEF78766.1| ribosomal protein S3 [Methylophaga thiooxydans DMS010]
Length = 189
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 100/189 (52%), Positives = 141/189 (74%)
Query: 32 LLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKL 91
+L DLK+R+YL+ L A V+KI I+R KN +I +++ARPG++IGKKG DI+K+RK+
Sbjct: 1 MLGNDLKVRDYLKQKLSHASVSKIQIDRPAKNAKITIHTARPGIVIGKKGEDIDKLRKEA 60
Query: 92 SNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKV 151
S + +++ V E+ KPE++ATL+A+S+AQQLERR++FRRAMKRAV + MR GA+G+++
Sbjct: 61 SQLMGIPVNVGVEEIRKPELDATLVAESVAQQLERRIMFRRAMKRAVTNTMRLGAEGIRI 120
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
+GRLNGAE++RTE Y EGRVPL TLRA IDYGTA A+T YG G+KV++ + +
Sbjct: 121 NVAGRLNGAEIARTEWYREGRVPLHTLRADIDYGTAEAKTTYGIIGVKVWIFKGEVFDAN 180
Query: 212 DSTIPAAEH 220
P AE
Sbjct: 181 AQNAPVAEK 189
>gi|190571552|ref|YP_001975910.1| ribosomal protein S3 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213018954|ref|ZP_03334761.1| ribosomal protein S3 [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|226697775|sp|B3CN32|RS3_WOLPP RecName: Full=30S ribosomal protein S3
gi|190357824|emb|CAQ55280.1| ribosomal protein S3 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995063|gb|EEB55704.1| ribosomal protein S3 [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 206
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 101/206 (49%), Positives = 146/206 (70%), Gaps = 2/206 (0%)
Query: 1 MGQKINPILFRLGVNCT-WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER 59
MGQK+NP +FRL +N W+S W A +Y LH+DL IR Y+ K AG++K+ +ER
Sbjct: 1 MGQKVNPKVFRLQINSNTWDSVWCATD-DYKQKLHQDLFIRSYINESFKHAGISKVTVER 59
Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
T +I++S++PG+IIGKKG D+EKI++K++ S + ++V V K EI+A LI++S
Sbjct: 60 TVTLVSVIIHSSKPGVIIGKKGLDVEKIKQKIAKKVESSVEVNVVGVKKSEIDAVLISRS 119
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
I QLE+R+ RRAMK+A+Q+ ++ GA+G+KV SGRL GAE++RTE Y EGR+PL TLR
Sbjct: 120 ITHQLEKRISCRRAMKKAIQNCLKMGAEGIKVSCSGRLGGAEIARTEWYKEGRLPLHTLR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLR 205
A+IDY A+T G G+KV+V +
Sbjct: 180 ANIDYAFCEAKTICGIIGVKVWVYVG 205
>gi|294155421|ref|YP_003559805.1| 30S ribosomal protein S3 [Mycoplasma crocodyli MP145]
gi|291600102|gb|ADE19598.1| 30S ribosomal protein S3 [Mycoplasma crocodyli MP145]
Length = 224
Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 88/217 (40%), Positives = 140/217 (64%), Gaps = 4/217 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FR GV N+ WFA +++G L ED KI ++ +++Q + K+ I+RT
Sbjct: 1 MGQKVNPNGFRFGVTKAHNTTWFADKAQFGNQLVEDAKIYKFFDKYVRQYQLGKVEIKRT 60
Query: 61 HKNCR-IIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE---IHLSVNEVPKPEINATLI 116
N + ++SA+P +++G++G +I ++ KL+ ++ I++ V E+ P++NA L+
Sbjct: 61 QDNHTTVTLHSAKPAVVLGQEGKNIVELTTKLTKFIKNKHIKINIKVVELKNPDLNARLL 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
A+ IA +LE R FR A K A+++AMR A G+K SGRLNG +++R+E Y EG + L
Sbjct: 121 AEMIAIKLENRESFRTAQKMAIRNAMRARAKGIKTSVSGRLNGVDMARSEGYSEGEMKLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
TLR ++DY TA A T YG+ G+KV+VSL + + D
Sbjct: 181 TLRQNVDYATATARTTYGAIGVKVWVSLGEILEGDDK 217
>gi|290487126|gb|ADD29947.1| ribosomal protein S3 [Plumbago auriculata]
Length = 218
Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 81/217 (37%), Positives = 129/217 (59%), Gaps = 11/217 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + S WFA+ Y L ED KIR+ + + ++ G+
Sbjct: 1 MGQKINPLGFRLGTSQNHYSIWFAQPKNYFEGLQEDKKIRDCINNYAQKNMKTSSGVKGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK---IRKKLSNMTNSEIHLSVNEVPKP 109
A+I I++ R+I+Y P L+I KG IE+ +K N N ++++++ + KP
Sbjct: 61 ARIEIKKRIDLIRVIIYIGFPKLLIENKGRGIEELEMNVQKELNSVNQKLNITITRIGKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ ++A+ IA+QL+ RV FR+AMK+A++ R G+++ +GR++G E++R E
Sbjct: 121 YRHPKILAEFIAEQLKNRVSFRKAMKKAIELTERADTKGIQIQIAGRIDGKEIARIEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
EGRVPLQT+RA IDY T YG GIK+++ + +
Sbjct: 181 EGRVPLQTIRAKIDYCAYTVLTIYGVLGIKIWIFIDE 217
>gi|295698643|ref|YP_003603298.1| ribosomal protein S3 [Candidatus Riesia pediculicola USDA]
gi|291157086|gb|ADD79531.1| ribosomal protein S3 [Candidatus Riesia pediculicola USDA]
Length = 232
Score = 216 bits (549), Expect = 3e-54, Method: Composition-based stats.
Identities = 100/210 (47%), Positives = 151/210 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +P RLG+ WNS W+A + + L DLK+R +L+ LK+A ++KI IER
Sbjct: 1 MGQKSHPNGLRLGIIKNWNSTWYAGKKTFSSQLISDLKVRNFLKKSLKKASISKIFIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +YSARPG+IIGKKG DIEK+RK ++ +T ++++E+ KPE++A L+A+SI
Sbjct: 61 SKSIRVTIYSARPGIIIGKKGEDIEKLRKNITKITGVPSQVNISEIRKPELDAKLVAESI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
+ Q+E+R++FRR +KR++Q+ MR GA G+K+ SGRL G+E++RTE EGR+PL TLRA
Sbjct: 121 SSQIEKRIIFRRIIKRSIQNTMRSGAQGIKIEISGRLGGSEIARTEWNREGRIPLHTLRA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210
ID+ T+ A+T YG G+KV++ + +
Sbjct: 181 DIDFSTSKAKTTYGIIGVKVWIFKGEIFGN 210
>gi|323148943|ref|YP_004222497.1| ribosomal protein S3 [Smilax china]
gi|308742634|gb|ADO33485.1| ribosomal protein S3 [Smilax china]
Length = 218
Score = 216 bits (549), Expect = 3e-54, Method: Composition-based stats.
Identities = 78/218 (35%), Positives = 131/218 (60%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + S WFA+ Y A + ED KIR ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHYSFWFAQPKNYSAGIQEDEKIRNCIKNYVQKNKKTPSGFEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I+Y P L+I + IE+++ +K + N +++++ V KP
Sbjct: 61 ARIEIKKRIDLIQVIIYIGFPNLLIEDRARGIEELQMNVQKKFHSMNRRLNIAITRVEKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E
Sbjct: 121 YGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQTDTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA ID+ + T YG GIK+++ + +E
Sbjct: 181 EGRVPLQTIRAKIDHCSYTIRTIYGVLGIKIWIFVDEE 218
>gi|192911944|gb|ACF06580.1| ribosomal protein S3 [Elaeis guineensis]
Length = 221
Score = 216 bits (549), Expect = 3e-54, Method: Composition-based stats.
Identities = 74/217 (34%), Positives = 127/217 (58%), Gaps = 11/217 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + S WFA+ Y L ED KIR ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHRSFWFAQTKNYSVGLQEDEKIRNCIKNYVQKNRRISSGFEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN---MTNSEIHLSVNEVPKP 109
A+I I++ ++I++ P L+I + IE+++ + N +++++ + KP
Sbjct: 61 ARIGIQKRIDLIQVIIHIGFPNLLIEGQTRGIEELQMNVQKELHSVNRRLNIAITRIEKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
++A+ IA QL+ RV FR++MK+A++ + G++V +GR++G E++R E
Sbjct: 121 YGQPNILAEYIALQLKNRVSFRKSMKKAIELTEQTDIKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
EGRVPLQT+RA IDY + T YG GIK+++ + +
Sbjct: 181 EGRVPLQTIRAKIDYCSYTIRTIYGVLGIKIWIFVNE 217
>gi|254237120|ref|ZP_04930443.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa C3719]
gi|126169051|gb|EAZ54562.1| 30S ribosomal protein S3 [Pseudomonas aeruginosa C3719]
Length = 193
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 97/177 (54%), Positives = 129/177 (72%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ S W+A Y L DLK+REYLQ LK A V++I I R
Sbjct: 1 MGQKVHPNGIRLGIVKEHTSVWYADRKNYADYLFADLKVREYLQDKLKSASVSRIDIHRP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ RI +++ARPG++IGKKG D+EK+R+ L+ +H+++ E+ KPE++A L+AQS+
Sbjct: 61 AQTARITIHTARPGIVIGKKGEDVEKLRQDLTKQMGVPVHINIEEIRKPELDAMLVAQSV 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
AQQLERRV+FRRAMKRAVQ+AMR GA G+K+ SGRL GAE++RTE Y EGRVPL T
Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRVPLHT 177
>gi|229577793|ref|YP_002836129.1| ribosomal protein S3 [Megaleranthis saniculifolia]
gi|226933921|gb|ACO92054.1| ribosomal protein S3 [Megaleranthis saniculifolia]
Length = 218
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 77/218 (35%), Positives = 130/218 (59%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + +S WF++ Y L ED KI+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHHSVWFSQPKSYSEGLQEDQKIQNCIKNYVQKNMKISSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I+Y P L+I IE+++ +K N ++++++ V KP
Sbjct: 61 ARIKIQKRIDLIQVIIYMGFPKLLIEGSPRGIEELQINVQKELNSVTRKLNIAITRVSKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E
Sbjct: 121 YGQPNILAEFIAGQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY + T YG+ GIK+++ +E
Sbjct: 181 EGRVPLQTIRAKIDYCSYTVRTIYGALGIKIWIFTDEE 218
>gi|69216145|gb|AAZ03900.1| ribosomal protein S3 [Yucca schidigera]
Length = 220
Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats.
Identities = 72/220 (32%), Positives = 127/220 (57%), Gaps = 13/220 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA---------- 50
MGQKINP+ FRLG +S WFA+ + L ED KIR ++ ++++
Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNFSVGLQEDEKIRNCIKNYVQKNKRISPGFEGI 60
Query: 51 GVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT---NSEIHLSVNEVP 107
G+A+I I++ ++I+Y P L+I + IE+++ + N ++++ +
Sbjct: 61 GIARIEIQKRIDLIQVIIYIGFPNLLIEGRTRGIEELQMNVQKEFRSVNRRLNIATTRIE 120
Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTEC 167
KP + ++A+ +A QL RV FR+AMKRA++ + G+++ +GR++G E++R E
Sbjct: 121 KPYGHPNILAEYMASQLRNRVSFRKAMKRAIELTEQTDTKGIQIQIAGRIDGKEIARVEW 180
Query: 168 YLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA ID+ + T +G G+K+++ + +E
Sbjct: 181 IREGRVPLQTIRAKIDHCSYTIRTIHGVLGLKIWIFVDEE 220
>gi|75755698|ref|YP_319802.1| ribosomal protein S3 [Acorus calamus]
gi|161622348|ref|YP_001586220.1| ribosomal protein S3 [Acorus americanus]
gi|91207765|sp|Q3V4Z5|RR3_ACOCL RecName: Full=30S ribosomal protein S3, chloroplastic
gi|69216135|gb|AAZ03895.1| ribosomal protein S3 [Acorus americanus]
gi|74381748|emb|CAI53833.1| ribosomal protein S3 [Acorus calamus]
gi|160369891|gb|ABX38782.1| ribosomal protein S3 [Acorus americanus]
Length = 218
Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats.
Identities = 77/218 (35%), Positives = 130/218 (59%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + S WFA+ Y L ED KIRE ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGATQSHLSLWFAQPKSYSMGLQEDEKIRECIKNYVQKNPRLSSGFEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I+Y P L I + I++++ +K N N +++++ + KP
Sbjct: 61 ARIEIKKRIDLIQVIIYIGFPNLFIEGRTQGIKELQMSVQKRLNSVNQRLNIAIARISKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
++A+ IA QL+ RV FR+AMK+A++ + G+++ +GR++G E++R E
Sbjct: 121 YGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQIQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA ID+ +T YG GIK+++ + +E
Sbjct: 181 EGRVPLQTIRAKIDHCFHKVQTIYGVLGIKIWIFVDEE 218
>gi|296936710|gb|ADH94382.1| ribosomal protein S3 [Syzygium cumini]
Length = 216
Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats.
Identities = 75/214 (35%), Positives = 126/214 (58%), Gaps = 11/214 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQGHHSIWFAQAKNYSDGLQEDQKIRNCIKNYIQKNMRISSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I + ++I+Y L++ K IE+++ +K N N ++++++ + P
Sbjct: 61 ARIEIRKRIDLIQVIIYMGFQKLLLEGKTRRIEELQMNVQKELNCVNRKLNIAITRITNP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ ++A+ IA QL+ RV FR+A+K+A++ + G++V +GR++G E++R E
Sbjct: 121 YGHPNILAEFIAGQLKNRVSFRKAIKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
EGRVPLQT+RA IDY + T YG GIK+++
Sbjct: 181 EGRVPLQTIRAKIDYCSYGVRTVYGVLGIKIWIC 214
>gi|169794111|ref|YP_001718475.1| ribosomal protein S3 [Manihot esculenta]
gi|157695923|gb|ABV66192.1| ribosomal protein S3 [Manihot esculenta]
Length = 218
Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats.
Identities = 77/215 (35%), Positives = 125/215 (58%), Gaps = 11/215 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + +S WFA+ Y L ED KIR ++ ++K+ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFAQPKNYSEGLQEDQKIRNCIKNYVKKNAKISSGIEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
+I I++ ++I+Y P L+I + IE+++ +K N N + ++++ +P P
Sbjct: 61 VRIEIQKRIDVIQVIIYMGFPKLLIESRPKRIEELQMNVQKELNCVNRKFNIAITRIPNP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ ++ + IA QL+ RV FR+AMK+A++ + G++V +GRL+G E++R E
Sbjct: 121 YGHPNILGEFIAGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRLDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
EGRVPLQT+ A IDY + T YG GIK++
Sbjct: 181 EGRVPLQTIGAKIDYCSYTVRTIYGVLGIKIWTFP 215
>gi|169142898|ref|YP_001687321.1| ribosomal protein S3 [Oenothera glazioviana]
gi|159895510|gb|ABX10075.1| ribosomal protein S3 [Oenothera glazioviana]
Length = 219
Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats.
Identities = 77/219 (35%), Positives = 130/219 (59%), Gaps = 13/219 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA---------- 50
M QKINP+ FRLG + +S WFA+ +Y L ED KIR+ +Q ++++
Sbjct: 1 MAQKINPLGFRLGTTQSHHSIWFAQPKDYSDGLQEDQKIRDCIQNYIQKNMQISSDSGVE 60
Query: 51 GVAKILIERTHKNCRIIVYSARPGLIIG---KKGTDIEKIRKKLSNMTNSEIHLSVNEVP 107
G+A+I I +T ++ +Y P L+I ++ ++++I +K N N +I++++ ++
Sbjct: 61 GIARIEIRKTIDLIQVKIYMGFPKLLIEDGTRRIEELQRIVQKEINSVNRKINITITKIT 120
Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTEC 167
KP + ++A+ IA QL RV FR+A+++A++ A + G++V GR+NG E++R
Sbjct: 121 KPYGDPNILAEFIAGQLNNRVSFRKAIQKAIELAEQADTKGIRVQIGGRINGGEIARVLW 180
Query: 168 YLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
EGRVPLQT+RA IDY T +G GIK+++ D
Sbjct: 181 MKEGRVPLQTIRAKIDYCVYTVRTIHGLLGIKIWIFRED 219
>gi|283794903|ref|YP_003359256.1| ribosomal protein S3 [Cryptomonas paramecium]
gi|253981875|gb|ACT46792.1| ribosomal protein S3 [Cryptomonas paramecium]
Length = 217
Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats.
Identities = 82/208 (39%), Positives = 126/208 (60%), Gaps = 2/208 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLGV S W A Y + L ED +R+Y AG++ I I R
Sbjct: 1 MGQKVHPLGFRLGVVYRHRSSWVADKGNYPSYLKEDFLLRKYFSSRFLDAGISTIEIHRR 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVP--KPEINATLIAQ 118
+ +Y++RP ++ I++I++ L N+ ++ V+ + P+++A L+A
Sbjct: 61 LTYIDLYLYASRPNALMANSQAAIKEIKEYLRNLGANDACFRVHVLALLHPDLDAYLLAT 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
I+QQLE+R+ FR+ M++A++ A + GA G+KV SGRL GAE+SR+E EGRVPLQTL
Sbjct: 121 FISQQLEKRISFRKVMQQAIRRARKAGAKGIKVQISGRLGGAEISRSEWKREGRVPLQTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRD 206
A I+Y A T YG G+KV++ R+
Sbjct: 181 YADINYAAKEAHTNYGVLGVKVWIFRRE 208
>gi|322380622|ref|ZP_08054774.1| 30S ribosomal protein S3 [Helicobacter suis HS5]
gi|321146944|gb|EFX41692.1| 30S ribosomal protein S3 [Helicobacter suis HS5]
Length = 221
Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats.
Identities = 104/199 (52%), Positives = 142/199 (71%)
Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVY 69
RLG+N W SRWF A + ED +IR++L+ L AGV++ILIER K R+ V
Sbjct: 1 MRLGINRNWTSRWFPSSGVAVANIEEDYRIRKFLKKELYYAGVSEILIERAAKKLRVTVV 60
Query: 70 SARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV 129
+ARPGLIIGKKG DIEK++ L ++ E+ L++ EV +P+ +A L A+++A QLE+RV
Sbjct: 61 AARPGLIIGKKGVDIEKVKTSLKDLIRKEVALNIKEVKRPQADAQLAAENVATQLEKRVA 120
Query: 130 FRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189
FRRAMK+ +Q+AM+ GA G+KV SGRL GAE++RTE Y+EGRVPL TLRA IDYG A A
Sbjct: 121 FRRAMKKVMQTAMKAGARGIKVRVSGRLAGAEIARTEWYMEGRVPLHTLRAKIDYGFAEA 180
Query: 190 ETAYGSCGIKVYVSLRDEV 208
T YG+ G+KV++ + +
Sbjct: 181 FTVYGNIGVKVWLFKGEVL 199
>gi|122233584|sp|Q4FG73|RR3_GINBI RecName: Full=30S ribosomal protein S3, chloroplastic
gi|69216137|gb|AAZ03896.1| ribosomal protein S3 [Ginkgo biloba]
Length = 218
Score = 214 bits (545), Expect = 8e-54, Method: Composition-based stats.
Identities = 79/218 (36%), Positives = 130/218 (59%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQ+INP+ FRLGV S WFA+ Y L ED +IR ++ ++++ G+
Sbjct: 1 MGQRINPLGFRLGVTQNHRSHWFAQKKYYSEDLQEDEEIRNCIENYVRRHMKNYSNYGGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPKP 109
A++ I R ++ ++ P L+I +G IE++R + NM N ++++S+ +V KP
Sbjct: 61 ARVEIRRKIDLIQVEIHIGFPNLLIEDRGRGIEQLRTDVRNMLNSANRKLNISIAKVAKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
++A+ IA QLE RV FR+ +K+A++ A + G+++ +GRL+G E++R E
Sbjct: 121 YGVPNILAEYIALQLEDRVSFRKTVKKAIELAEQADIRGIQIQIAGRLDGNEIARVEWAR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
GRVPLQT+RA ID+ A+T YG GIK+++ +E
Sbjct: 181 GGRVPLQTIRARIDHCYYPAKTIYGVLGIKIWIFGDEE 218
>gi|150251512|ref|YP_001312245.1| ribosomal protein S3 [Cycas taitungensis]
gi|172048630|sp|A6H5M0|RR3_CYCTA RecName: Full=30S ribosomal protein S3, chloroplastic
gi|149941562|dbj|BAF64986.1| ribosomal protein S3 [Cycas taitungensis]
Length = 218
Score = 214 bits (545), Expect = 8e-54, Method: Composition-based stats.
Identities = 77/218 (35%), Positives = 125/218 (57%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKI--------REYLQCHLKQAGV 52
MGQK+NP+ FRLG+ S WFA+ Y L ED KI R +++ G+
Sbjct: 1 MGQKMNPLGFRLGITQNHRSHWFAQQKNYSEDLREDEKISNCIVNYIRRHMRSSSNHGGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKP 109
A++ I R ++ ++ P L+I +G E++R + NM N ++++++ +V KP
Sbjct: 61 ARVEIRRKIDLIQVEIHIGFPNLLIENRGRGSEQLRTDVRNMLNPVDGKLNIAIVKVAKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
++A+ IA QLE RV R +KRA++ A + G+++ +GRL+G E++R E
Sbjct: 121 YGEPNILAEFIALQLEDRVSLGRTVKRAIELAEQADIKGIQIQIAGRLDGNEIARVEWAR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA ID+ A+T YG GIK+++ ++
Sbjct: 181 EGRVPLQTIRAKIDHCYYPAQTIYGVLGIKIWIFGDEK 218
>gi|217077289|ref|YP_002335007.1| ribosomal protein S3 [Thermosipho africanus TCF52B]
gi|226697768|sp|B7IHV2|RS3_THEAB RecName: Full=30S ribosomal protein S3
gi|217037144|gb|ACJ75666.1| ribosomal protein S3 [Thermosipho africanus TCF52B]
Length = 209
Score = 214 bits (545), Expect = 8e-54, Method: Composition-based stats.
Identities = 96/207 (46%), Positives = 145/207 (70%), Gaps = 2/207 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG+ W + WF Y L ED +IR+ ++ QAG+++I+IER
Sbjct: 1 MGQKVHPRGFRLGITADWQATWF-NEKNYKEYLLEDEEIRKVIKNKYAQAGISEIVIERP 59
Query: 61 HKNCRI-IVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
I I+ SARPG+IIGKKG +I ++R++L N ++V E+ PE++A L+A++
Sbjct: 60 DSERVIAIIKSARPGIIIGKKGAEITELRQELEKRFNRRFIVNVEEIKNPEVDAQLVAEN 119
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA ++E+R ++ MK+A+ +AM+ GA G+K++ SGRL GAE++RTE YL+GR+PLQT++
Sbjct: 120 IASRIEKRASYKVVMKKAIFNAMKKGAKGIKIMVSGRLAGAEIARTEWYLKGRLPLQTIK 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRD 206
+ IDYGTA AET YG+ GIKV++ D
Sbjct: 180 SIIDYGTARAETKYGTIGIKVWIYKGD 206
>gi|301353378|ref|YP_003795619.1| ribosomal protein S3 [Pteridium aquilinum subsp. aquilinum]
gi|301016296|gb|ADK47583.1| ribosomal protein S3 [Pteridium aquilinum subsp. aquilinum]
Length = 218
Score = 214 bits (544), Expect = 9e-54, Method: Composition-based stats.
Identities = 83/218 (38%), Positives = 128/218 (58%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIR----EYLQCHLKQA----GV 52
MG+KI+P+ FRLGV+ S WFA+ +Y L ED KIR +Y++ HLK A GV
Sbjct: 1 MGRKIHPLGFRLGVSQKHYSHWFAQTKDYPKFLEEDRKIRTSVEKYIEKHLKDASNYGGV 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKP 109
I I+R +I +++ P L+I ++ I +++ + NM ++ + ++ V +P
Sbjct: 61 GHIEIQRKTDLVQIDIHTGFPDLLIEERSLGISQMKSDIENMLGLESRKLRVILSSVAQP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
++A+ +A QL+ RV FRR MK+A++ R G G+K+ +GRLNG+E++R E
Sbjct: 121 YAEPKILAEHVASQLKNRVPFRRTMKKAIELVGRTGDRGIKIQIAGRLNGSEMARVEWAR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA I Y A+T +G GIK + E
Sbjct: 181 EGRVPLQTIRARISYCYHPAQTIHGVLGIKTWTFRGTE 218
>gi|11467009|ref|NP_041916.1| ribosomal protein S3 [Euglena gracilis]
gi|133928|sp|P19169|RR3_EUGGR RecName: Full=30S ribosomal protein S3, chloroplastic
gi|14370|emb|CAA77920.1| ribosomal protein S3 [Euglena gracilis]
gi|336883|gb|AAA84227.1| ribosomal protein [Euglena gracilis]
gi|415759|emb|CAA50103.1| 30S ribosomal protein S3 [Euglena gracilis]
Length = 218
Score = 214 bits (544), Expect = 9e-54, Method: Composition-based stats.
Identities = 87/217 (40%), Positives = 126/217 (58%), Gaps = 13/217 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK++P+ FRLG+ + +S W+ Y + + ED+ IR ++ L + ++ I IER
Sbjct: 1 MGQKVHPLGFRLGITKSHSSFWYVERRHYASFVKEDIVIRNFMNKELLETLISLIKIERI 60
Query: 60 -----THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-------SEIHLSVNEVP 107
N + ++ ARP +IG+ G + +IR L + N I V V
Sbjct: 61 YEFSEQRNNTIVYIHVARPERVIGRDGQGLSRIRDILIDRMNYLLGKTPRIITCKVVGVT 120
Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTEC 167
P ++A L+A S+ ++LE+R F RAMK + AM+ GA+G+KV SGRLNG E++RTE
Sbjct: 121 SPNLDARLLADSVRRELEKRTPFIRAMKTVMLQAMKAGAEGIKVQVSGRLNGIEIARTEW 180
Query: 168 YLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
+ EGRVPL TLRA IDY +A T YG GIKV+V
Sbjct: 181 FREGRVPLHTLRADIDYFNDIAHTIYGVLGIKVWVYK 217
>gi|49574619|ref|NP_848098.2| ribosomal protein S3 [Adiantum capillus-veneris]
gi|57015340|sp|Q85FI4|RR3_ADICA RecName: Full=30S ribosomal protein S3, chloroplastic
gi|48476030|gb|AAP29429.2| ribosomal protein S3 [Adiantum capillus-veneris]
Length = 217
Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 78/215 (36%), Positives = 126/215 (58%), Gaps = 11/215 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MG+KI+P+ FRLGV+ S WFA+ +Y L ED KIR ++ ++++ GV
Sbjct: 1 MGRKIHPLGFRLGVSQKHYSYWFAQKKDYPKFLEEDRKIRNLVEKYIQKHVKSVSNYGGV 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKP 109
I I+R +I +Y+ P L+I ++ I ++++ L N+ + +++ V +P
Sbjct: 61 GHIEIQRKTDLIQINIYTGFPDLLIEEQSLGISQMKQDLRNLLGLESQNLRVTLTGVIQP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
++A+ +A QL+ RV FRR MK+ ++ A R G+K+ +GRLNG+E++R E
Sbjct: 121 YGEPKILAEHVASQLKNRVPFRRTMKKTIEMAGRTNGGGIKIQIAGRLNGSEMARVEWAR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
EGRVPLQT+ A+I Y A+T YG GIK++V
Sbjct: 181 EGRVPLQTVEANISYCYHPAQTIYGVLGIKIWVFR 215
>gi|1173247|sp|P46172|RS3_BUCAK RecName: Full=30S ribosomal protein S3
gi|710611|dbj|BAA06581.1| ribosomal protein S3 [Acyrthosiphon kondoi endosymbiont]
Length = 205
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 98/202 (48%), Positives = 141/202 (69%), Gaps = 3/202 (1%)
Query: 28 EYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKI 87
E+ L D K+R++L L +A V++I+IER K+ R+ +++ARPG++IGKKG D+EK+
Sbjct: 1 EFADNLDSDFKVRQFLAKELAKASVSRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKL 60
Query: 88 RKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGAD 147
RK ++++ +++ EV KPE++A L+A SI QLERRV+FRRAMKRAVQ+AMR GA
Sbjct: 61 RKVVADIAGVPAQINIAEVRKPELDAKLVADSITSQLERRVMFRRAMKRAVQNAMRLGAK 120
Query: 148 GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
G+KV SGRL GAE++RTE Y EGRVPL TLRA IDY T+ A T YG G+KV++ +
Sbjct: 121 GIKVDVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSEAHTTYGVIGVKVWIFKGEI 180
Query: 208 VSDS---DSTIPAAEHRVVEKD 226
+ + PAA+ + ++
Sbjct: 181 LGGMAAVEQPEPAAQPKKQQRK 202
>gi|229915545|gb|ACQ90889.1| ribosomal protein S3 [Pedinomonas minor]
Length = 233
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 90/232 (38%), Positives = 127/232 (54%), Gaps = 26/232 (11%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P+ RLG+ S W+A +Y L+ ED +R YL K+AG+++I I+R
Sbjct: 1 MGQKIHPLGLRLGITQNPRSYWYAPTEQYSYLVVEDSILRNYLNNTYKEAGISRINIQRK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN--------------------------M 94
+ V +ARP + +GK IE +R+ L
Sbjct: 61 LNQIYVEVLAARPAIFVGKDTKGIESLRQTLEQKALSYRHDLVQHYGSSFFNEERGTILF 120
Query: 95 TNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIAS 154
N ++ L V E PE +A + + +QLE+RV FRRA+++A+Q A R G+K+ S
Sbjct: 121 QNPKVVLQVTERVNPEDDAAFLGDFVVEQLEKRVAFRRAVRQAMQRAQRARVKGIKIQVS 180
Query: 155 GRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
GRLNGAE++RTE EGRVPLQTLRA+IDY A T YG G+KV+V +
Sbjct: 181 GRLNGAEIARTEWVREGRVPLQTLRANIDYSYKTARTIYGLLGVKVWVFKNE 232
>gi|11466742|ref|NP_039338.1| ribosomal protein S3 [Marchantia polymorpha]
gi|133934|sp|P06356|RR3_MARPO RecName: Full=30S ribosomal protein S3, chloroplastic
gi|11713|emb|CAA28124.1| rps3 [Marchantia polymorpha]
Length = 217
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 81/218 (37%), Positives = 129/218 (59%), Gaps = 12/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIR--------EYLQCHLKQAGV 52
MGQKINP+ FRLG+ S WFA Y + ED KIR ++++ G+
Sbjct: 1 MGQKINPLGFRLGITQNHRSYWFANKK-YSKVFEEDKKIRDCIELYVQKHIKNSSNYGGI 59
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPKP 109
A++ I+R ++ +Y+ P L++ +G IE+++ + N+ + + +++ E+ KP
Sbjct: 60 ARVEIKRKTDLIQVEIYTGFPALLVESRGQGIEQLKLNVQNILSSEDRRLRMTLIEIAKP 119
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
++A+ IA +LE RV FRR MK+A++ A + G+K+ +GRLNGAE++R E
Sbjct: 120 YGEPKILAKKIALKLESRVAFRRTMKKAIELAKKGNIKGIKIQIAGRLNGAEIARVEWAR 179
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA I+Y A+T YG GIKV++ +E
Sbjct: 180 EGRVPLQTIRARINYCYYAAQTIYGVLGIKVWIFQDEE 217
>gi|168702380|ref|ZP_02734657.1| 30S ribosomal protein S3 [Gemmata obscuriglobus UQM 2246]
Length = 257
Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats.
Identities = 101/233 (43%), Positives = 138/233 (59%), Gaps = 15/233 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFA-------RGSEYGALLHEDLKIREYLQCHLKQAG-- 51
MGQK+ P FR G+ W S W+A G+ + LL ED+ IR ++Q +L
Sbjct: 1 MGQKVRPTGFRTGIMRPWRSTWYAPKNSPAADGNSFADLLLEDVAIRAFIQKYLTNKKDR 60
Query: 52 ------VAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNE 105
+A I IERT + ++V S+R G IIGKKG IEK+ K L +T I + E
Sbjct: 61 KEQRPAIADIRIERTRERVTVVVASSRVGAIIGKKGEKIEKLTKALEKLTRRHIEVKTVE 120
Query: 106 VPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRT 165
V +PEI+A LIA+ IA+QLE+R FRR MK+A+Q AM GA GVK+ SGRL GAE++R
Sbjct: 121 VTRPEIDAQLIAEDIAEQLEKRASFRRTMKQAMQRAMEGGAKGVKLQLSGRLGGAEMARC 180
Query: 166 ECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
E +EG +PL TLR ++YG A A T G+ GIK +V+ D ++ + A
Sbjct: 181 EKGMEGSIPLSTLRVKVEYGFAEAVTPQGNIGIKAWVNQGDYLTGDIADTTEA 233
>gi|50364944|ref|YP_053369.1| 30S ribosomal protein S3 [Mesoplasma florum L1]
gi|51704227|sp|P46247|RS3_MESFL RecName: Full=30S ribosomal protein S3
gi|50363500|gb|AAT75485.1| 30S ribosomal protein S3 [Mesoplasma florum L1]
Length = 241
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 86/218 (39%), Positives = 134/218 (61%), Gaps = 3/218 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P + RLG+ W W+A +Y L +D+KIRE + LK A V+KI IERT
Sbjct: 1 MGQKVSPNVLRLGIVRDWEDTWYAEKDQYVKWLDQDIKIREGVLKLLKDAAVSKIKIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKI---RKKLSNMTNSEIHLSVNEVPKPEINATLIA 117
+ N +I+ +ARP +++G++G ++ I +K++ N ++ + V EV P+ +ATL+A
Sbjct: 61 NSNITLIIRTARPAIVLGQEGKNVSNIATAVQKIAKDRNLKVEVKVIEVKNPDADATLVA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ I +Q+ R FR K A++ A++ G G+K SGRL G E++RTE Y+EG VPL T
Sbjct: 121 RWIGEQITNRASFRTVQKLAIRKALKAGVKGIKTSVSGRLGGVEMARTEGYIEGSVPLST 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
LRA IDY A T YG G+KV+++ + + +
Sbjct: 181 LRADIDYALYEAPTTYGQIGVKVWINHGEVIGGQSQRV 218
>gi|148270428|ref|YP_001244888.1| ribosomal protein S3 [Thermotoga petrophila RKU-1]
gi|189045371|sp|A5IM89|RS3_THEP1 RecName: Full=30S ribosomal protein S3
gi|147735972|gb|ABQ47312.1| SSU ribosomal protein S3P [Thermotoga petrophila RKU-1]
Length = 209
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 94/207 (45%), Positives = 143/207 (69%), Gaps = 2/207 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG++ W ++WF Y L ED +IR++++ AG+++I +ER
Sbjct: 1 MGQKVHPRGFRLGLSADWQAKWF-NEKNYKEWLLEDEEIRKFIKNRYYHAGISEIYVERP 59
Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
+ I V +ARPG+IIG+KG +I +R++L N + +++ E+ PE++A L+A+S
Sbjct: 60 DAERINITVKTARPGIIIGRKGAEITSLREELERKFNRRVVINIEEIKTPELDAQLVAES 119
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA ++E+R ++ AMKRA+ +AMR GA G+KV+ +GRL GAE++R E YL GR+PLQ L+
Sbjct: 120 IASRIEKRASYKVAMKRAIMNAMRKGAQGIKVMVAGRLGGAEIARREWYLRGRLPLQKLK 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRD 206
A IDYGTA A T YG+ GIKV++ D
Sbjct: 180 AIIDYGTATAWTKYGTIGIKVWIYKGD 206
>gi|71842320|ref|YP_277408.1| ribosomal protein S3 [Emiliania huxleyi]
gi|91207766|sp|Q4G359|RR3_EMIHU RecName: Full=30S ribosomal protein S3, chloroplastic
gi|60101563|gb|AAX13907.1| ribosomal protein S3 [Emiliania huxleyi]
Length = 216
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 87/216 (40%), Positives = 133/216 (61%), Gaps = 8/216 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL----KQAGVAKIL 56
MGQK +P FR+G+N + +S WFA YG +L ED KIR++ + +AGV+K+
Sbjct: 1 MGQKTHPTGFRIGINKSHDSTWFANYGTYGEILKEDYKIRKFFENDWGTLYNKAGVSKVE 60
Query: 57 IERTHKNCRIIVYSARPGLIIG--KKGTDIEKIRKKLSNMTN--SEIHLSVNEVPKPEIN 112
I+R +++++ARP I G + + +R ++ +TN + + V +V K E
Sbjct: 61 IKRKVNQLELLIHAARPKAIAGTADEESTFSTLRAQIKKLTNNPKQTRIKVIQVNKMETE 120
Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172
+ L+A+++A+QLE+RV F+RA++ Q + G G K+ SGRLNGAE++R E EGR
Sbjct: 121 SVLVARALAEQLEKRVAFKRAIRLVAQRLQKSGTKGFKIQVSGRLNGAEMARDEWVREGR 180
Query: 173 VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208
VPLQTLRA I Y TA A T YG GIKV++ ++ +
Sbjct: 181 VPLQTLRADISYATARAYTTYGVLGIKVWIFNKEII 216
>gi|293363489|ref|ZP_06610245.1| ribosomal protein S3 [Mycoplasma alligatoris A21JP2]
gi|292552838|gb|EFF41592.1| ribosomal protein S3 [Mycoplasma alligatoris A21JP2]
Length = 224
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 88/217 (40%), Positives = 138/217 (63%), Gaps = 4/217 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FR GV N+ WFA +++G L ED KI ++ ++Q + K+ I+RT
Sbjct: 1 MGQKVNPNGFRYGVTKAHNTTWFADKAQFGNQLVEDAKIYKFFDKLVRQYQIGKVEIKRT 60
Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE---IHLSVNEVPKPEINATLI 116
N + + SA+P L++G++G ++ ++ KL+ ++ +++ V E+ P++NA L+
Sbjct: 61 QNNHVTVTLLSAKPALVLGQEGKNVVELTTKLTKFIKNKNIKLNIKVVELKNPDLNARLL 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
A+ IA +LE R FR A K A+++AMR A GVK SGRLNG +++R+E Y EG + L
Sbjct: 121 AEMIAVKLENRESFRTAQKMAIRNAMRSRAKGVKTSVSGRLNGVDMARSEGYSEGEMKLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
TLR ++DY TA A T YG+ G+KV+VSL + + D
Sbjct: 181 TLRQNVDYATATARTTYGAIGVKVWVSLGEILEGDDK 217
>gi|225011653|ref|ZP_03702091.1| ribosomal protein S3 [Flavobacteria bacterium MS024-2A]
gi|225004156|gb|EEG42128.1| ribosomal protein S3 [Flavobacteria bacterium MS024-2A]
Length = 239
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 97/216 (44%), Positives = 145/216 (67%), Gaps = 2/216 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI RLG+ W+S W+ G YG + ED KIR+Y+ L +A V+ ++IERT
Sbjct: 1 MGQKTNPIGNRLGIIRGWDSNWY-GGRNYGDKIAEDDKIRKYIHARLSKASVSNVIIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I + +ARPG+IIGK G +++K++++L +T E+ +++ E+ +PE++A L+ S+
Sbjct: 60 LKIITITITTARPGIIIGKAGQEVDKLKEELRKITGKEVQINIFEIKRPELDAQLVGASV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A+Q+E R+ +RRA+K A+ +A+R A+G+K+ SGRLNGAE++R E Y EGR+PL T RA
Sbjct: 120 ARQIESRISYRRAIKMAIAAAIRMNAEGIKIQISGRLNGAEMARAESYKEGRIPLSTFRA 179
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
IDY A T YG GIKV++ + EV P
Sbjct: 180 DIDYALVEAHTTYGRLGIKVWIM-KGEVYGKRELSP 214
>gi|292559546|ref|YP_003540970.1| 30S ribosomal protein S3 [Phoenix dactylifera]
gi|290790954|gb|ADD63209.1| 30S ribosomal protein S3 [Phoenix dactylifera]
gi|294620616|gb|ADF28185.1| 30S ribosomal protein S3 [Phoenix dactylifera]
Length = 221
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 72/217 (33%), Positives = 127/217 (58%), Gaps = 11/217 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + S WFA+ Y L ED KIR ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHRSFWFAQTKNYSVGLQEDEKIRNCIKNYVQKNRRISSGFEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN---MTNSEIHLSVNEVPKP 109
A+I I++ ++I++ P L++ + IE+++ + N +++++ + KP
Sbjct: 61 ARIGIQKRIDLIQVIIHIGFPNLLMEGQTRGIEELQMNVQKELHSVNRRLNIAITRIEKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
++A+ IA QL+ RV FR++MK+A++ + G++V +GR++G E++R E
Sbjct: 121 YGQPNILAEYIALQLKNRVSFRKSMKKAIELTEQTDTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
EGRVPLQT+RA ID+ + T YG GIK+++ + +
Sbjct: 181 EGRVPLQTIRAKIDHCSYTIRTIYGVLGIKIWIFVNE 217
>gi|115604972|ref|YP_784425.1| ribosomal protein S3 [Drimys granadensis]
gi|122164402|sp|Q06GV8|RR3_DRIGR RecName: Full=30S ribosomal protein S3, chloroplastic
gi|112032700|gb|ABH88335.1| ribosomal protein S3 [Drimys granadensis]
Length = 216
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 76/216 (35%), Positives = 128/216 (59%), Gaps = 9/216 (4%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA------GVAK 54
MG+KINP+ FRLG N + S WFA+ Y L ED KIR+ ++ ++++ G++
Sbjct: 1 MGKKINPLGFRLGANQSHRSLWFAQPKSYSRGLQEDEKIRDCIKNYVQKNMRSGSEGISH 60
Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEK---IRKKLSNMTNSEIHLSVNEVPKPEI 111
I I++ ++I+Y P L+I + IE+ +K N +++++ V KP
Sbjct: 61 IEIKKKIDLIQVIIYIGFPNLLIEGRTRGIEELRINVQKGFRSVNRRLNIAITRVAKPYG 120
Query: 112 NATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEG 171
++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E EG
Sbjct: 121 QPNILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIREG 180
Query: 172 RVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
RVPLQT+RA ID+ + T YG GIK+++ + ++
Sbjct: 181 RVPLQTIRAKIDHCSYTVRTIYGVLGIKIWIFVDEQ 216
>gi|456686|gb|AAA21915.1| ribosomal protein S3 [Mesoplasma florum]
Length = 241
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 85/218 (38%), Positives = 133/218 (61%), Gaps = 3/218 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P + RLG+ W W+A +Y L +D+KIRE + LK A V+KI IERT
Sbjct: 1 MGQKVSPNVLRLGIVRDWEDTWYAEKDQYVKWLDQDIKIREGVLKLLKDAAVSKIKIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKI---RKKLSNMTNSEIHLSVNEVPKPEINATLIA 117
+ N +I+ +ARP +++G++G ++ I +K++ N ++ + V EV P+ + TL+A
Sbjct: 61 NSNITLIIRTARPAIVLGQEGKNVSNIATAVQKIAKDRNLKVEVKVIEVKNPDADRTLVA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ I +Q+ R FR K A++ A++ G G+K SGRL G E++RTE Y+EG VPL T
Sbjct: 121 RWIGEQITNRASFRTVQKLAIRKALKAGVKGIKTSVSGRLGGVEMARTEGYIEGSVPLST 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
LRA IDY A T YG G+KV+++ + + +
Sbjct: 181 LRADIDYALYEAPTTYGQIGVKVWINHGEVIGGQSQRV 218
>gi|170289177|ref|YP_001739415.1| ribosomal protein S3 [Thermotoga sp. RQ2]
gi|226697769|sp|B1LBN4|RS3_THESQ RecName: Full=30S ribosomal protein S3
gi|170176680|gb|ACB09732.1| ribosomal protein S3 [Thermotoga sp. RQ2]
Length = 209
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 94/207 (45%), Positives = 143/207 (69%), Gaps = 2/207 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG++ W ++WF Y L ED +IR++++ AG+++I +ER
Sbjct: 1 MGQKVHPRGFRLGLSADWQAKWF-NEKNYKEWLLEDEEIRKFIKNKYYHAGISEIYVERP 59
Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
+ I V +ARPG+IIG+KG +I +R++L N + +++ E+ PE++A L+A+S
Sbjct: 60 DAERINITVKTARPGIIIGRKGAEITSLREELERKFNRRVVINIEEIKTPELDAQLVAES 119
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA ++E+R ++ AMKRA+ +AMR GA G+KV+ +GRL GAE++R E YL GR+PLQ L+
Sbjct: 120 IASRIEKRASYKVAMKRAIMNAMRKGAQGIKVMVAGRLGGAEIARREWYLRGRLPLQKLK 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRD 206
A IDYGTA A T YG+ GIKV++ D
Sbjct: 180 AIIDYGTATAWTKYGTIGIKVWIYKGD 206
>gi|290487094|gb|ADD29931.1| ribosomal protein S3 [Lonicera japonica]
Length = 226
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 75/226 (33%), Positives = 128/226 (56%), Gaps = 19/226 (8%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + +S WFA+ Y L ED KIR ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFAQPKNYSEGLQEDQKIRNSIKNYIQKNMRIASGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK-----------IRKKLSNMTNSEIHL 101
+I I+++ ++I+Y L+I + +I K +K + N ++++
Sbjct: 61 GRIEIQKSIDLIQVIIYMGFSKLLIKSRMREIVKLKRNLQEELQMNLQKEFHWVNRKLNI 120
Query: 102 SVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAE 161
++ E+ KP N ++A+ IA QL+ RV R+AMK+ ++ + G G++V +GR+NG +
Sbjct: 121 AITEIEKPYGNPNILAEFIANQLKNRVSVRKAMKKVIELTEKEGTKGIQVQIAGRINGKD 180
Query: 162 LSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
++R EGRVPLQT+RA IDY + T +G GIK+++ + E
Sbjct: 181 IARVVWIREGRVPLQTIRAKIDYCSYTVRTIHGVLGIKIWIFIDGE 226
>gi|156598143|gb|ABU85336.1| ribosomal protein S3 [Elaeis oleifera]
Length = 217
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 73/217 (33%), Positives = 127/217 (58%), Gaps = 11/217 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + S WFA+ Y L ED KIR ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHRSFWFAQTKNYSVGLQEDEKIRNCIKNYVQKNRRISSGFEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN---MTNSEIHLSVNEVPKP 109
A+I I++ ++I++ P L+I + IE+++ + N +++++ + KP
Sbjct: 61 ARIGIQKRIDLIQVIIHIGFPNLLIEGQTRGIEELQMNVQKELHSVNRRLNIAITRIEKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
++A+ IA QL+ RV FR++MK+A++ + G++V +GR++G E++R E
Sbjct: 121 YGQPNILAEYIALQLKNRVSFRKSMKKAIELTEQTDTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
EGRVPLQT+RA ID+ + T YG GIK+++ + +
Sbjct: 181 EGRVPLQTIRAKIDHCSYTIRTIYGVLGIKIWIFVNE 217
>gi|108773373|ref|YP_635835.1| ribosomal protein S3 [Oltmannsiellopsis viridis]
gi|122244723|sp|Q20F10|RR3_OLTVI RecName: Full=30S ribosomal protein S3, chloroplastic
gi|82541955|gb|ABB81996.1| ribosomal protein S3 [Oltmannsiellopsis viridis]
Length = 235
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 81/225 (36%), Positives = 123/225 (54%), Gaps = 16/225 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLGV S+WFA+ EY L+ ED +RE L +G+ + I+R
Sbjct: 1 MGQKVHPLGFRLGVTQKHRSQWFAKPQEYSQLVLEDHFLREELNKRFPNSGIIDLFIQRK 60
Query: 61 HKNCRII--VYSARPGLIIGKKGTDIEKIRKKLSNMT--------------NSEIHLSVN 104
++ + + RPGL++G+K + +K+++ + +++ L V
Sbjct: 61 VDRTQVEVEIRTTRPGLLVGRKRQNCDKLKQLRDELQVELNKFRAKNGVSPTAKVALQVT 120
Query: 105 EVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSR 164
V A +IA+ + QLERR+ FRRA++R + R G K+ SGRLNGAE++R
Sbjct: 121 TVQNKSSEAIVIAEFLVNQLERRIAFRRALRRVLSIIQRDRVQGAKIQVSGRLNGAEIAR 180
Query: 165 TECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVS 209
+E GRVPLQTLRA +DY A+T YG GIKV+ +
Sbjct: 181 SEWIRTGRVPLQTLRADVDYCHREAKTIYGILGIKVWTFKGEIKP 225
>gi|150020851|ref|YP_001306205.1| ribosomal protein S3 [Thermosipho melanesiensis BI429]
gi|189045343|sp|A6LLL9|RS3_THEM4 RecName: Full=30S ribosomal protein S3
gi|149793372|gb|ABR30820.1| ribosomal protein S3 [Thermosipho melanesiensis BI429]
Length = 209
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 99/207 (47%), Positives = 144/207 (69%), Gaps = 2/207 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG+ W ++WF Y L ED +IR+ ++ QAG+++I+IER
Sbjct: 1 MGQKVHPRGFRLGITTDWQAKWF-NEKNYKEYLLEDEEIRKVIKSKYAQAGISEIVIERP 59
Query: 61 HKNCRI-IVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
+ IV +ARPG+IIGKKG +I +RK L N ++V E+ PE++A LIA++
Sbjct: 60 DSERVVAIVKTARPGIIIGKKGAEITALRKDLEEKFNRRFIVNVEEIKTPEVDAQLIAEN 119
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
+A ++E+R ++ MKRA+ +AM+ GA G+K++ SGRL GAE++RTE YL+GR+PLQT+R
Sbjct: 120 VANRIEKRASYKVVMKRAIFNAMKKGAKGIKIMVSGRLAGAEIARTEWYLKGRLPLQTIR 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRD 206
+ IDYGTA AET YG+ GIKV+V D
Sbjct: 180 SIIDYGTARAETKYGTIGIKVWVYKGD 206
>gi|193216755|ref|YP_001999997.1| 30S ribosomal protein S3 [Mycoplasma arthritidis 158L3-1]
gi|226697731|sp|B3PMP1|RS3_MYCA5 RecName: Full=30S ribosomal protein S3
gi|193002078|gb|ACF07293.1| ribosomal protein S3 [Mycoplasma arthritidis 158L3-1]
Length = 247
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 88/237 (37%), Positives = 136/237 (57%), Gaps = 11/237 (4%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FR G+ NS W+A ++ + L ED KI ++ ++Q + + I+R
Sbjct: 1 MGQKVNPNGFRYGITKAHNSVWYADKMQFASHLLEDQKIYDFFDKKVRQLQIGNVQIKRN 60
Query: 61 HKNCR-IIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS---EIHLSVNEVPKPEINATLI 116
I VY+A+P +++G G +I+ + K L + + I + V E+ KP++NA L+
Sbjct: 61 QNGLILIYVYTAKPAVMLGTNGENIKNLTKDLQKILKNKKANISIQVIELKKPDLNARLL 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
A+ IA +LE R FR A K A+++A++ GA G+K SGRLNG +++RTE Y EG + L
Sbjct: 121 AEDIAIKLENRGSFRLAQKFAIKAALKAGAKGIKTSVSGRLNGVDMARTEGYNEGEMKLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP-------AAEHRVVEKD 226
TLR +DY A+T YG G+KV+VSL + +SD A + R V +
Sbjct: 181 TLRQDVDYAATTAKTTYGILGVKVWVSLGEILSDEQKAKQEEMDLLNAPKDRRVRRG 237
>gi|164597835|ref|NP_084731.2| ribosomal protein S3 [Oenothera elata subsp. hookeri]
gi|169142983|ref|YP_001687405.1| ribosomal protein S3 [Oenothera biennis]
gi|172045757|sp|Q9MTI7|RR3_OENEH RecName: Full=30S ribosomal protein S3, chloroplastic
gi|159793156|gb|ABW98910.1| ribosomal protein S3 [Oenothera biennis]
gi|162423702|emb|CAB67198.2| ribosomal protein S3 [Oenothera elata subsp. hookeri]
Length = 219
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 76/219 (34%), Positives = 129/219 (58%), Gaps = 13/219 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA---------- 50
M QKINP+ FRLG + +S WFA+ +Y L ED KIR+ +Q ++++
Sbjct: 1 MAQKINPLGFRLGTTQSHHSIWFAQPKDYSDGLQEDQKIRDCIQNYIQKNMQISSDSGVE 60
Query: 51 GVAKILIERTHKNCRIIVYSARPGLIIG---KKGTDIEKIRKKLSNMTNSEIHLSVNEVP 107
G+A+I I + ++ +Y P L+I ++ ++++I +K N N +I++++ ++
Sbjct: 61 GIARIEIRKRIDLIQVKIYMGFPKLLIEDGTRRIEELQRIVQKEINSVNRKINITITKIT 120
Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTEC 167
KP + ++A+ IA QL RV FR+A+++A++ A + G++V GR+NG E++R
Sbjct: 121 KPYGDPNILAEFIAGQLNNRVSFRKAIQKAIELAEQADTKGIRVQIGGRINGGEIARVLW 180
Query: 168 YLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
EGRVPLQT+RA IDY T +G GIK+++ D
Sbjct: 181 MKEGRVPLQTIRAKIDYCVYTVRTIHGLLGIKIWIFRED 219
>gi|213496088|gb|ACJ49192.1| ribosomal protein S3 [uncultured Geobacter sp.]
Length = 175
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 96/176 (54%), Positives = 139/176 (78%), Gaps = 1/176 (0%)
Query: 2 GQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTH 61
GQK+NP+ FRLGV TW+S+W+A +Y LLHEDLK+R +L+ L +GV+KI IER
Sbjct: 1 GQKVNPVGFRLGVIKTWDSKWYAE-KDYAKLLHEDLKLRAFLKKRLYHSGVSKIEIERAA 59
Query: 62 KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIA 121
+I +++ARPGLIIGKKG+++E ++K+L+ +T+ E++L++ EV KPE++A L+A+++A
Sbjct: 60 GKAKINIFTARPGLIIGKKGSEVETLKKELAKLTDKEVYLNIQEVRKPELDAQLVAENVA 119
Query: 122 QQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
QLERR+ FRRAMK++V S ++FGA G+++ SGRL GAE+SRTE Y EGRVPL T
Sbjct: 120 LQLERRIAFRRAMKKSVTSTLKFGAKGIRITCSGRLGGAEMSRTEWYREGRVPLHT 175
>gi|169142748|ref|YP_001687175.1| ribosomal protein S3 [Oenothera argillicola]
gi|169143069|ref|YP_001687489.1| ribosomal protein S3 [Oenothera parviflora]
gi|159792986|gb|ABW98742.1| ribosomal protein S3 [Oenothera argillicola]
gi|159895595|gb|ABX10159.1| ribosomal protein S3 [Oenothera parviflora]
Length = 219
Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats.
Identities = 76/219 (34%), Positives = 129/219 (58%), Gaps = 13/219 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA---------- 50
M QKINP+ FRLG + +S WFA+ +Y L ED KIR+ +Q ++++
Sbjct: 1 MAQKINPLGFRLGTTQSHHSIWFAQPKDYSDGLQEDQKIRDCIQNYIQKNIQISSDSGVE 60
Query: 51 GVAKILIERTHKNCRIIVYSARPGLIIG---KKGTDIEKIRKKLSNMTNSEIHLSVNEVP 107
G+A+I I + ++ +Y P L+I ++ ++++I +K N N +I++++ ++
Sbjct: 61 GIARIEIRKRIDLIQVKIYMGFPKLLIEDGTRRIEELQRIVQKEINSVNRKINITITKIT 120
Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTEC 167
KP + ++A+ IA QL RV FR+A+++A++ A + G++V GR+NG E++R
Sbjct: 121 KPYGDPNILAEFIAGQLNNRVSFRKAIQKAIELAEQADTKGIRVQIGGRINGGEIARVLW 180
Query: 168 YLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
EGRVPLQT+RA IDY T +G GIK+++ D
Sbjct: 181 MKEGRVPLQTIRAKIDYCVYTVRTIHGLLGIKIWIFRED 219
>gi|71894647|ref|YP_278755.1| 30S ribosomal protein S3 [Mycoplasma synoviae 53]
gi|91207820|sp|Q4A5C7|RS3_MYCS5 RecName: Full=30S ribosomal protein S3
gi|71851435|gb|AAZ44044.1| 30S ribosomal protein S3 [Mycoplasma synoviae 53]
Length = 226
Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats.
Identities = 84/225 (37%), Positives = 137/225 (60%), Gaps = 4/225 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FR GV N+ WFA + YG+ L ED+KI ++ ++ + K+ I+R
Sbjct: 1 MGQKVNPNGFRYGVTKAHNTTWFAHKATYGSKLVEDVKIYKFFDKFTRKFQIGKVEIQRD 60
Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLI 116
+ + +++++P I+G+ GT+I+ + +K +++L V + +P++NA L+
Sbjct: 61 LNNKVSVFLHTSKPAAILGENGTNIKNLTVALQKHLKNKKLDVNLKVLTIKEPDLNARLL 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
A+ IA +LE R FR A K A++SA++ GA G+K SGRLNG +++RTE Y EG + L
Sbjct: 121 AEMIATKLENRESFRSAQKIAIRSALKAGAKGIKTAVSGRLNGVDMARTEGYSEGEMKLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
TLR + Y TA A T YG+ G+KV+VSL + + + A+ +
Sbjct: 181 TLRQDVSYATATARTTYGAIGVKVWVSLGEILQGDRTFHHASTKK 225
>gi|308746027|ref|YP_003934597.1| ribosomal protein S3 [Cheilanthes lindheimeri]
gi|302375460|gb|ADL29834.1| ribosomal protein S3 [Cheilanthes lindheimeri]
Length = 218
Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats.
Identities = 74/215 (34%), Positives = 125/215 (58%), Gaps = 11/215 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MG+KI+P+ FRLGVN S WFA+ +Y L D KIR +++ ++++ GV
Sbjct: 1 MGRKIHPLGFRLGVNQKHYSYWFAQKKDYPKFLEGDRKIRNFVENYIQKHVKNVSNYGGV 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPKP 109
I I+R +I +++ P L+I ++ I +++ L N+ N + +++ V +P
Sbjct: 61 GHIEIQRKTDLIQIDIHTGFPDLLIEEQSLGISQMKSDLGNILGLGNRNLRVTLTSVTQP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
++A+ +A QL R+ FRR MK+ ++ R G+K+ +GRLNG+E++R E
Sbjct: 121 YGEPKILAEHVALQLRSRIPFRRTMKKTIELVGRTNGQGIKIQIAGRLNGSEMARVEWAR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
EGRVPLQT++A+I Y A+T +G GIK+++
Sbjct: 181 EGRVPLQTIKANISYCYHPAQTIHGVLGIKIWIFR 215
>gi|108773278|ref|YP_635788.1| ribosomal protein S3 [Chara vulgaris]
gi|122231308|sp|Q1ACF9|RR3_CHAVU RecName: Full=30S ribosomal protein S3, chloroplastic
gi|77157934|gb|ABA61975.1| ribosomal protein S3 [Chara vulgaris]
Length = 219
Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats.
Identities = 81/219 (36%), Positives = 123/219 (56%), Gaps = 11/219 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKI+P+ FRLG S WFA+ + Y LL ED +IR + H++ G+
Sbjct: 1 MGQKIHPLGFRLGFIQEHYSHWFAKANSYSELLQEDKEIRSCIYNHIRNHVRNSSNYGGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK---IRKKLSNMTNSEIHLSVNEVPKP 109
A+I I R ++ +++ P L+I + +E ++ + ++ +++ EV KP
Sbjct: 61 ARINIYRRTDLVQLQIHTGFPALLIENRIRGLEHLRRDIQEKIDHKKRKLRMTLVEVLKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
T++A+ IA QLE RV FRR MK+A+Q A G+K+ +GRLNGAE++R E
Sbjct: 121 YTEPTILAEYIALQLENRVAFRRVMKKAIQLAKISDIKGIKIQIAGRLNGAEIARNEWIQ 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208
+GR+PLQ LRA+I Y A T YG GIKV++ +
Sbjct: 181 KGRLPLQMLRANIHYCHYPAHTIYGVLGIKVWIFREKII 219
>gi|159106830|ref|YP_001531250.1| ribosomal protein S3 [Cuscuta obtusiflora]
gi|172048146|sp|A8W3M0|RR3_CUSOB RecName: Full=Plastid 30S ribosomal protein S3
gi|158142554|gb|ABW20595.1| ribosomal protein S3 [Cuscuta obtusiflora]
Length = 219
Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats.
Identities = 74/217 (34%), Positives = 123/217 (56%), Gaps = 11/217 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ RLG N S WF++ Y L ED KIR +++ +++ G+
Sbjct: 1 MGQKINPLGLRLGTNQDHYSIWFSQPKAYSKSLQEDQKIRSFIRKYIQNMKISPSGVEGL 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I + + ++ P L++ + +EK++ +K N N +++ + +V KP
Sbjct: 61 ARISIYKRIDLIELRIFLGFPKLLLENRPQGLEKLQITLQKELNCGNRRLNIVITKVEKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
N ++A+ IA QL+ RV R+AMK+A++ A G++V +GRLNG +++R +
Sbjct: 121 YSNPNILAEFIAGQLKNRVSVRQAMKKAIELAEEADTKGIQVQVAGRLNGQDIARVQWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
EGRVP QT+RA DY + T YG GIK+++ + +
Sbjct: 181 EGRVPRQTIRATFDYCSYPVRTIYGILGIKIWIFVGE 217
>gi|157826057|ref|YP_001493777.1| 30S ribosomal protein S3 [Rickettsia akari str. Hartford]
gi|189045324|sp|A8GPE4|RS3_RICAH RecName: Full=30S ribosomal protein S3
gi|157800015|gb|ABV75269.1| 30S ribosomal protein S3 [Rickettsia akari str. Hartford]
Length = 217
Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats.
Identities = 93/210 (44%), Positives = 142/210 (67%), Gaps = 5/210 (2%)
Query: 1 MGQKINPILFRLG--VNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIE 58
MGQK+ FR+G + W+S +A Y L +DLKIR+ + QA V+++LIE
Sbjct: 1 MGQKVCAHGFRVGPTLIKGWDSVLYAE-KHYKTLFIQDLKIRDLINKGFNQAQVSRVLIE 59
Query: 59 RTHKNCRII-VYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLI 116
R II + + +P +IIG+ G++I+K++K + MT E++++++EV K I+A ++
Sbjct: 60 RPSNKSIIISINAKKPNIIIGRNGSEIDKLKKAIEKMTFLKEVYINIHEVRKFNIDAAIV 119
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QLE+RV FR+AMK A+Q++++ G G++V SGRL GAE++RTE Y+EGR+PL
Sbjct: 120 AQTIALQLEKRVSFRKAMKTAIQASLKQGGQGIRVSCSGRLGGAEIARTEWYIEGRMPLH 179
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
TLRA IDY TA A T YG G+KV++ +
Sbjct: 180 TLRADIDYSTAEAITTYGVIGVKVWIYKGE 209
>gi|289066805|ref|YP_003434323.1| ribosomal protein S3 [Vigna radiata]
gi|27734481|sp|Q8MCA5|RR3_PHAAN RecName: Full=30S ribosomal protein S3, chloroplastic
gi|22725681|gb|AAN04888.1| ribosomal protein S3 [Vigna angularis]
gi|259019992|gb|ACV90190.1| ribosomal protein S3 [Vigna radiata]
Length = 216
Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats.
Identities = 76/216 (35%), Positives = 131/216 (60%), Gaps = 11/216 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + +S WFA+ ++Y + ED KIR++++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHDSIWFAQPTKYSENIQEDKKIRDWIKNYIQKNRRISSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN---MTNSEIHLSVNEVPKP 109
+I I++ ++I+Y P L+I K IE+++ + N ++++++ +V
Sbjct: 61 GEIKIQKRIDLIQVIIYMGFPKLLIEGKPQKIEELQTNMHKKLNCVNRKLNIAIVKVTNA 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ ++A+ IA QL+ RV FR+AMK+A++ + G GV+V +GR++G E++R E
Sbjct: 121 YKHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGVQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
EGRVPLQT+RA I+Y T YG GIKV++ +
Sbjct: 181 EGRVPLQTIRAKIEYCCYTVRTIYGVLGIKVWIFSK 216
>gi|215400766|ref|YP_002327527.1| ribosomal protein S3 [Vaucheria litorea]
gi|194441216|gb|ACF70944.1| ribosomal protein S3 [Vaucheria litorea]
Length = 216
Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats.
Identities = 83/216 (38%), Positives = 129/216 (59%), Gaps = 8/216 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIRE-----YLQCHLKQAGVAKI 55
MG K +P+ FRLG+ S W+++ S Y L+ ED IR+ ++ +K GV KI
Sbjct: 1 MGHKTHPLGFRLGITQQHKSAWYSKLSNYSTLIKEDFAIRKIIYDYFIYNSIKSTGVTKI 60
Query: 56 LIERTHKNCRII--VYSARPGLIIGKKGTDIEKIRKKLSNM-TNSEIHLSVNEVPKPEIN 112
I R +K +I + +A+PG+I+G+ G ++ + K L N+ N + +++ E+
Sbjct: 61 FITRNNKGDKINLEIQTAKPGVIVGELGKGLDILDKNLCNLLPNKKTLINIIEIKDIFNY 120
Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172
A L+A + QLE R+ FRRAMKR ++ + G+K+ +GRLNGAE++RTE EG+
Sbjct: 121 ADLLADMLVLQLENRIPFRRAMKRILEYVQKNRIKGIKIQIAGRLNGAEIARTEWLREGQ 180
Query: 173 VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208
VPLQTLRA IDY A+T YG GIK+++ + +
Sbjct: 181 VPLQTLRADIDYSFKTAQTIYGIIGIKIWIFKGEIL 216
>gi|47459076|ref|YP_015938.1| 30S ribosomal protein S3 [Mycoplasma mobile 163K]
gi|61215555|sp|Q6KI49|RS3_MYCMO RecName: Full=30S ribosomal protein S3
gi|47458405|gb|AAT27727.1| 30S ribosomal protein s3 [Mycoplasma mobile 163K]
Length = 225
Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats.
Identities = 78/224 (34%), Positives = 131/224 (58%), Gaps = 4/224 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FR GV N+ W+A ++ +L +D KI + ++ + K+ I R
Sbjct: 1 MGQKVNPNGFRYGVTKKHNTLWYADKKDFADILLQDDKIYRFFNKFTREYLIGKVEIRRN 60
Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE---IHLSVNEVPKPEINATLI 116
++V+SA+PG I+G+ G +I K+ + + + ++ +++ V + P++NA ++
Sbjct: 61 QNGHLSVLVHSAKPGAILGQNGENINKLTQDIQKLLRNKELKLNIEVVNIKNPDLNAIIL 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
A+ IA +LE R FR A K A+++AM+ GA G+K SGRLNG +++R+E Y EG + L
Sbjct: 121 AEQIAIKLENRAPFRVAQKFAIRNAMKSGAKGIKTQVSGRLNGVDMARSEGYSEGEMKLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
TLR +D+ A A T YG+ G+KV+VS + + + E
Sbjct: 181 TLRQDVDFAMATARTTYGAIGVKVWVSKGEFLDGNGEKNVTTEK 224
>gi|32480881|ref|NP_862792.1| ribosomal protein S3 [Calycanthus floridus var. glaucus]
gi|68052981|sp|Q7YJU0|RR3_CALFG RecName: Full=30S ribosomal protein S3, chloroplastic
gi|32399417|emb|CAD28759.1| ribosomal protein S3 [Calycanthus floridus var. glaucus]
Length = 218
Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats.
Identities = 74/218 (33%), Positives = 127/218 (58%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG N + +S WFA+ Y L ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGENQSHHSLWFAQPKSYCRGLQEDEKIRDCIKIYVQKNMRISSGFEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT---NSEIHLSVNEVPKP 109
A I I++ ++I+ P +I IE+++ + N +++++ V KP
Sbjct: 61 AHIEIQKKMDLIQVIISIGFPNFLIEGGTRGIEELQMNVQKRFHSANRRLNIAITRVAKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
++A+ IA+QL+ RV FR+AMK+ ++ + G++V +GR++G E++R E
Sbjct: 121 YGQPNILAEYIARQLKNRVSFRKAMKKVIELTEQADTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA ID+ + T YG GIK+++ + ++
Sbjct: 181 EGRVPLQTIRAKIDHCSYTVRTIYGVLGIKIWIFVDEQ 218
>gi|91205871|ref|YP_538226.1| 30S ribosomal protein S3 [Rickettsia bellii RML369-C]
gi|157826770|ref|YP_001495834.1| 30S ribosomal protein S3 [Rickettsia bellii OSU 85-389]
gi|123266185|sp|Q1RHM7|RS3_RICBR RecName: Full=30S ribosomal protein S3
gi|189045325|sp|A8GVC0|RS3_RICB8 RecName: Full=30S ribosomal protein S3
gi|91069415|gb|ABE05137.1| 30S ribosomal protein S3 [Rickettsia bellii RML369-C]
gi|157802074|gb|ABV78797.1| 30S ribosomal protein S3 [Rickettsia bellii OSU 85-389]
Length = 217
Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats.
Identities = 97/210 (46%), Positives = 145/210 (69%), Gaps = 5/210 (2%)
Query: 1 MGQKINPILFRLG--VNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIE 58
MGQK+ FR+G + W+S ++A +Y L +DLKIRE + QA V++ILIE
Sbjct: 1 MGQKVCAHGFRVGPTLIKGWDSVFYAE-KQYKTLFIQDLKIRELVNKSFTQAQVSRILIE 59
Query: 59 RTHKNCRII-VYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLI 116
R II + + +P +IIGK G++I+K++K + MT+ SE++++++EV K I+A ++
Sbjct: 60 RPSNKSIIININAKKPNIIIGKNGSEIDKLKKAIEKMTSLSEVYINIHEVRKFNIDAAIV 119
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QLE+RV FR+AMK A+Q++ + G G++V SGRL GAE++RTE Y+EGR+PL
Sbjct: 120 AQTIASQLEKRVSFRKAMKTAIQASFKQGGQGIRVSCSGRLGGAEIARTEWYIEGRMPLH 179
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
TLRA IDY TA A T YG G+KV++ +
Sbjct: 180 TLRADIDYSTAEAITTYGVIGVKVWIYKGE 209
>gi|156618940|ref|YP_001430075.1| ribosomal protein S3 [Cuscuta gronovii]
gi|171769776|sp|A7M934|RR3_CUSGR RecName: Full=Plastid 30S ribosomal protein S3
gi|156555978|emb|CAM98362.1| ribosomal protein S3 [Cuscuta gronovii]
Length = 219
Score = 211 bits (537), Expect = 7e-53, Method: Composition-based stats.
Identities = 74/217 (34%), Positives = 124/217 (57%), Gaps = 11/217 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ RLG N S WF++ Y L ED KIR +++ ++K G+
Sbjct: 1 MGQKINPLGLRLGTNQDHYSIWFSQPKAYSKSLQEDQKIRSFIRNYIKNMKISPSGVEGL 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I + + + ++ P L++ + +E+++ +K N N +++ + +V KP
Sbjct: 61 ARISIYKRIELIEVRIFLGFPKLLLENRPEGLEELQITLQKELNCGNRRLNILITKVEKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
N ++A+ IA QL+ RV R+AMK+A++ A G++V +GRLNG +++R +
Sbjct: 121 YSNPNILAEFIAGQLKNRVSVRQAMKKAIELAEEADTKGIQVQVAGRLNGQDIARVQWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
EGRVP QT+RA DY + T YG GIK+++ + +
Sbjct: 181 EGRVPRQTIRATFDYCSYPVRTIYGILGIKIWIFVGE 217
>gi|323149191|ref|YP_004222020.1| ribosomal protein S3 [Coccomyxa sp. C-169]
gi|317467247|gb|ADV29868.1| ribosomal protein S3 [Coccomyxa sp. C-169]
Length = 243
Score = 211 bits (536), Expect = 8e-53, Method: Composition-based stats.
Identities = 81/229 (35%), Positives = 127/229 (55%), Gaps = 24/229 (10%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+WFA+ +Y L+ ED +R+ + +AG+ + I+R
Sbjct: 1 MGQKVHPLGFRLGITQQHRSQWFAKPKQYSFLVVEDHFLRQTISAKFPEAGIVSVGIQRK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN------------------------MTN 96
RI + +ARP I+ G D++ +R+ LS
Sbjct: 61 VDQIRIDICAARPRAIVAFGGQDLDNLRRYLSQSLRGHREDTLGKARAFNPPTPGIAKPM 120
Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156
+I + + ++ P ++A ++ + +QLE+R+ FRRAMK AVQ A R G+K+ +GR
Sbjct: 121 PQIAIYITKLSNPNVSAGFLSDFLVEQLEKRIPFRRAMKSAVQRAQRAQIKGIKIQVAGR 180
Query: 157 LNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
LNGAE++R+E +G+VPLQTLRA++DY A T YG GIKV+
Sbjct: 181 LNGAEIARSEWIRKGQVPLQTLRANVDYSYRTASTIYGLLGIKVWTFQG 229
>gi|149390306|ref|YP_001294137.1| ribosomal protein S3 [Chloranthus spicatus]
gi|172048692|sp|A6MMG1|RR3_CHLSC RecName: Full=30S ribosomal protein S3, chloroplastic
gi|146744226|gb|ABQ43298.1| ribosomal protein S3 [Chloranthus spicatus]
Length = 220
Score = 211 bits (536), Expect = 8e-53, Method: Composition-based stats.
Identities = 76/220 (34%), Positives = 128/220 (58%), Gaps = 13/220 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG +S WFA+ Y L ED KI++ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGATQGHHSLWFAQPKSYSRGLQEDEKIKDCIKNYVQKNMRISSDYEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGT-----DIEKIRKKLSNMTNSEIHLSVNEVP 107
A I I++ ++I+Y ++ +G +++ +K + N +++ + EV
Sbjct: 61 AHIEIKKRIDLIQVIIYMGSKNSLMLIEGPTRGIEELQINVQKEFHSANQRLNIDITEVA 120
Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTEC 167
P L+A+ IA+QL++RV FR+AMK+ ++ A + G++V SGR++G E++R E
Sbjct: 121 NPYGQPNLLAEYIARQLKKRVSFRKAMKKTIEFAEQADTKGIQVQISGRIDGKEIARVEW 180
Query: 168 YLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY + T +G GIK++V + D+
Sbjct: 181 VREGRVPLQTIRAKIDYCSYTVRTIHGVLGIKIWVFVDDK 220
>gi|115605060|ref|YP_784512.1| ribosomal protein S3 [Piper cenocladum]
gi|122164323|sp|Q06GM1|RR3_PIPCE RecName: Full=30S ribosomal protein S3, chloroplastic
gi|112253789|gb|ABI14510.1| ribosomal protein S3 [Piper cenocladum]
Length = 220
Score = 211 bits (536), Expect = 8e-53, Method: Composition-based stats.
Identities = 75/220 (34%), Positives = 128/220 (58%), Gaps = 13/220 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA---------- 50
MG+KINP+ FRLG N + S WFA+ Y L ED KIR+ +Q ++++
Sbjct: 1 MGKKINPLGFRLGANQSHRSIWFAQSKSYSRGLQEDEKIRDCIQHYVEKNTRISSGFEGK 60
Query: 51 GVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT---NSEIHLSVNEVP 107
G++ I I++ ++I+Y P ++ + I++++ + N +++++ V
Sbjct: 61 GISHIEIQKKIDLIQVIIYMGSPNSLMEGRTRGIDELQTNVQKEFLSVNRRLNIAIIRVA 120
Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTEC 167
KP T++A+ IA QL+ RV FR+AMK A++ + G+++ +GR++G E++R E
Sbjct: 121 KPYAQPTILAEHIALQLKNRVSFRKAMKSAIELTEQADTKGIQIQIAGRIDGKEIARVEW 180
Query: 168 YLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA IDY + T YG GIK+++ L ++
Sbjct: 181 IREGRVPLQTIRAKIDYCSYTVRTIYGILGIKIWIFLDEK 220
>gi|139387431|ref|YP_001122785.1| ribosomal protein S3 [Phaseolus vulgaris]
gi|152060540|sp|A4GG84|RR3_PHAVU RecName: Full=30S ribosomal protein S3, chloroplastic
gi|112030953|gb|ABH88065.1| ribosomal protein S3 [Phaseolus vulgaris]
gi|158187170|gb|ABW22803.1| ribosomal protein S3 [Phaseolus vulgaris]
Length = 216
Score = 211 bits (536), Expect = 9e-53, Method: Composition-based stats.
Identities = 75/216 (34%), Positives = 130/216 (60%), Gaps = 11/216 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + +S WFA+ ++Y + ED KIR++++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHDSIWFAQPTKYSENIQEDKKIRDWIKNYIQKNIRISSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN---MTNSEIHLSVNEVPKP 109
+I I++ ++I+Y P L+I K IE+ + + N ++++++ ++
Sbjct: 61 GEIKIQKRIDLIQVIIYMGFPKLLIEGKPHKIEEFQTNMHKKLNCVNKKLNIAIVKITNA 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ ++A+ IA QL+ RV FR+AMK+A++ + G GV+V +GR++G E++R E
Sbjct: 121 YKHPNILAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGVQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
EGRVPLQT+RA I+Y T YG GIKV++ +
Sbjct: 181 EGRVPLQTIRAKIEYCCYTVRTIYGILGIKVWIFSK 216
>gi|157804029|ref|YP_001492578.1| 30S ribosomal protein S3 [Rickettsia canadensis str. McKiel]
gi|189045326|sp|A8EZL0|RS3_RICCK RecName: Full=30S ribosomal protein S3
gi|157785292|gb|ABV73793.1| 30S ribosomal protein S3 [Rickettsia canadensis str. McKiel]
Length = 217
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 92/216 (42%), Positives = 142/216 (65%), Gaps = 5/216 (2%)
Query: 1 MGQKINPILFRLG--VNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIE 58
MGQK+ FR+G + W+S +A Y L +DLKIR+ + QA ++++LIE
Sbjct: 1 MGQKVCAHGFRVGPTLIKGWDSVLYAE-KHYKTLFIQDLKIRDLINNSFNQAQISRVLIE 59
Query: 59 RTHKNCRII-VYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLI 116
R II + + +P +IIG+ G +I+K++K + MT E++++++EV K I+A ++
Sbjct: 60 RPSNKSIIININAKKPNVIIGRSGNEIDKLKKAIEKMTYLQEVYINIHEVRKFNIDAAIV 119
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QLE+RV FR+AMK A+Q++ + G G++V SGRL GAE++RTE Y+EGR+PL
Sbjct: 120 AQTIALQLEKRVSFRKAMKTAIQASFKQGGQGIRVSCSGRLGGAEIARTEWYIEGRMPLH 179
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
TLRA IDY TA A T YG G+KV++ + ++
Sbjct: 180 TLRADIDYSTAEAITTYGVIGVKVWIYKGEYTANKR 215
>gi|78103288|ref|YP_358620.1| ribosomal protein S3 [Phalaenopsis aphrodite subsp. formosana]
gi|91207773|sp|Q3BAJ8|RR3_PHAAO RecName: Full=30S ribosomal protein S3, chloroplastic
gi|58802818|gb|AAW82538.1| ribosomal protein S3 [Phalaenopsis aphrodite subsp. formosana]
Length = 218
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 75/218 (34%), Positives = 128/218 (58%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + +S WFA+ + L ED +IR ++ ++K+ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHHSFWFAKPKNFSIGLQEDERIRNCIKDYVKKNKKISSGFEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGT---DIEKIRKKLSNMTNSEIHLSVNEVPKP 109
A I I++ ++I+Y P L+I + +++ +K + N +++++ + KP
Sbjct: 61 AYIGIQKRIDFIQVIIYIGFPNLLIEGRTRGVEELQMNVQKEFHSVNRRLNIAITRIEKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
++A+ IA QL+ RV FR+AMK+A++ + G G++V +GR++G E++R E
Sbjct: 121 YGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQTGTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA ID+ + T YG GIK+++ + E
Sbjct: 181 EGRVPLQTIRAKIDHCSHTVRTIYGILGIKIWIFVNQE 218
>gi|189095428|ref|YP_001936441.1| 30S ribosomal protein S3 [Heterosigma akashiwo]
gi|157694771|gb|ABV66047.1| 30S ribosomal protein S3 [Heterosigma akashiwo]
gi|157778002|gb|ABV70188.1| 30S ribosomal protein S3 [Heterosigma akashiwo]
Length = 218
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 86/218 (39%), Positives = 131/218 (60%), Gaps = 10/218 (4%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL-----QCHLKQAGVAKI 55
MG K +P+ FR+G+ T S WF+ EY LL ED K+RE L +++ +G++KI
Sbjct: 1 MGHKTHPMGFRVGITKTHQSSWFSNLKEYSKLLEEDFKLRESLLKFLSSKNIENSGISKI 60
Query: 56 LIERTHKNCRI--IVYSARPGLIIGKKGTDIEKIRKKLSN--MTNSEIHLSVNEVPKPEI 111
LI R +I +++A PG+I+GK G +E++ N +I +++ E+ +P
Sbjct: 61 LINRNSNGTQIQLEIHTAFPGIIVGKSGKTLEELNTFFEKTFSNNKKIIINLVEITEPYR 120
Query: 112 NATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGA-DGVKVIASGRLNGAELSRTECYLE 170
A LI I QQLE+R F+R +K+A+ + G +G+KV SGRLNGAE++R+E +
Sbjct: 121 EAGLIGDYIVQQLEKRTQFKRVVKKAISLSTSKGNIEGIKVQISGRLNGAEIARSEWVRQ 180
Query: 171 GRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208
GRVPLQTLRA IDY A+T YG G+K+++ +
Sbjct: 181 GRVPLQTLRADIDYSYKTAQTTYGILGVKIWLFKGEIF 218
>gi|34581375|ref|ZP_00142855.1| 30S ribosomal protein S3 [Rickettsia sibirica 246]
gi|28262760|gb|EAA26264.1| 30S ribosomal protein S3 [Rickettsia sibirica 246]
Length = 217
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 92/210 (43%), Positives = 142/210 (67%), Gaps = 5/210 (2%)
Query: 1 MGQKINPILFRLG--VNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIE 58
MGQK+ FR+G + W+S +A Y L +DLKIR+ + QA ++++LIE
Sbjct: 1 MGQKVCAHGFRVGPTLIKGWDSILYAE-KHYKTLFIQDLKIRDLINKGFNQAQISRVLIE 59
Query: 59 RTHKNCRII-VYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLI 116
R II + + +P +IIG+ G++I+K++K + MT+ E++++++EV K I+A ++
Sbjct: 60 RPSNKSIIININAKKPNIIIGRNGSEIDKLKKAIEKMTSLKEVYINIHEVRKFNIDAAIV 119
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QLE+RV FR+AMK A+Q++ + G G++V SGRL GAE++RTE Y+EGR+PL
Sbjct: 120 AQTIALQLEKRVSFRKAMKTAIQASFKQGGQGIRVSCSGRLGGAEIARTEWYIEGRMPLH 179
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
TLRA IDY TA A T YG G+KV++ +
Sbjct: 180 TLRADIDYSTAEAITTYGVIGVKVWIYKGE 209
>gi|15892923|ref|NP_360637.1| 30S ribosomal protein S3 [Rickettsia conorii str. Malish 7]
gi|157828854|ref|YP_001495096.1| 30S ribosomal protein S3 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933581|ref|YP_001650370.1| 30S ribosomal protein S3 [Rickettsia rickettsii str. Iowa]
gi|229587003|ref|YP_002845504.1| 30S ribosomal protein S3 [Rickettsia africae ESF-5]
gi|238650966|ref|YP_002916822.1| 30S ribosomal protein S3 [Rickettsia peacockii str. Rustic]
gi|27734522|sp|Q92GX2|RS3_RICCN RecName: Full=30S ribosomal protein S3
gi|189045327|sp|B0BUQ4|RS3_RICRO RecName: Full=30S ribosomal protein S3
gi|189045328|sp|A8GT63|RS3_RICRS RecName: Full=30S ribosomal protein S3
gi|259495256|sp|C3PPA1|RS3_RICAE RecName: Full=30S ribosomal protein S3
gi|259495257|sp|C4K2H3|RS3_RICPU RecName: Full=30S ribosomal protein S3
gi|15620115|gb|AAL03538.1| 30S ribosomal protein S3 [Rickettsia conorii str. Malish 7]
gi|157801335|gb|ABV76588.1| 30S ribosomal protein S3 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165908668|gb|ABY72964.1| SSU ribosomal protein S3P [Rickettsia rickettsii str. Iowa]
gi|228022053|gb|ACP53761.1| 30S ribosomal protein S3 [Rickettsia africae ESF-5]
gi|238625064|gb|ACR47770.1| 30S ribosomal protein S3 [Rickettsia peacockii str. Rustic]
Length = 217
Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats.
Identities = 92/210 (43%), Positives = 142/210 (67%), Gaps = 5/210 (2%)
Query: 1 MGQKINPILFRLG--VNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIE 58
MGQK+ FR+G + W+S +A Y L +DLKIR+ + QA ++++LIE
Sbjct: 1 MGQKVCAHGFRVGPTLIKGWDSILYAE-KHYKTLFIQDLKIRDLINKGFNQAQISRVLIE 59
Query: 59 RTHKNCRII-VYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLI 116
R II + + +P +IIG+ G++I+K++K + MT+ E++++++EV K I+A ++
Sbjct: 60 RPSNKSIIININAKKPNIIIGRNGSEIDKLKKAIEKMTSLKEVYINIHEVRKFNIDAAIV 119
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QLE+RV FR+AMK A+Q++ + G G++V SGRL GAE++RTE Y+EGR+PL
Sbjct: 120 AQTIALQLEKRVSFRKAMKTAIQASFKQGGQGIRVSCSGRLGGAEIARTEWYIEGRMPLH 179
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
TLRA IDY TA A T YG G+KV++ +
Sbjct: 180 TLRADIDYSTAEAITTYGVIGVKVWIYKGE 209
>gi|307043539|gb|ADN23592.1| ribosomal protein S3 [Almond witches'-broom phytoplasma]
Length = 238
Score = 210 bits (534), Expect = 2e-52, Method: Composition-based stats.
Identities = 78/214 (36%), Positives = 122/214 (57%), Gaps = 3/214 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ W S+W+A + L++ED KIR ++ + +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIQNWRSQWYAEDKQVPNLVYEDFKIRTLIKKFYIRGIISEIEIKRK 60
Query: 61 HKNC---RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117
N I +++++ GL+ G + K+ +K+ N +I L+V EV + A+L+A
Sbjct: 61 KSNSEEITINLFTSKIGLVQGADNKEKNKLLQKIEKTINKKILLNVFEVKTIDKIASLVA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
Q++A QL++R FR K Q ++ GA GVK+I SGRL GAE++R E G VPL T
Sbjct: 121 QNVAMQLQQRSYFRAVQKITTQKVLKSGAKGVKIILSGRLGGAEIARRETISLGLVPLNT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
RA IDY A T YG G++V++ + + +
Sbjct: 181 FRADIDYAFEEAHTTYGVLGVQVWIFHGEVLPNK 214
>gi|222099973|ref|YP_002534541.1| 30S ribosomal protein S3 [Thermotoga neapolitana DSM 4359]
gi|254764553|sp|B9K892|RS3_THENN RecName: Full=30S ribosomal protein S3
gi|221572363|gb|ACM23175.1| 30S ribosomal protein S3 [Thermotoga neapolitana DSM 4359]
Length = 209
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 94/207 (45%), Positives = 143/207 (69%), Gaps = 2/207 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG++ W ++WF Y L ED +IR+ ++ AG+++I IER
Sbjct: 1 MGQKVHPRGFRLGLSADWQAKWF-NEKNYKEWLLEDEEIRKIIKNKYYHAGISEIYIERP 59
Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
+ I V +ARPG+IIG+KG +I +R++L N + +++ E+ PE++A L+A+S
Sbjct: 60 DAERVNITVKTARPGIIIGRKGAEITSLREELEKRFNRRMVINIEEIKTPELDAQLVAES 119
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA ++E+R ++ AMKRA+ +AMR GA G+KV+ +GRL GAE++R E YL GR+PLQ ++
Sbjct: 120 IASRIEKRASYKVAMKRAIMNAMRKGAQGIKVMVAGRLGGAEIARREWYLRGRLPLQKIK 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRD 206
A IDYGTAVA T YG+ G+KV++ D
Sbjct: 180 AIIDYGTAVAWTKYGTIGVKVWIYKGD 206
>gi|149390392|ref|YP_001294391.1| ribosomal protein S3 [Dioscorea elephantipes]
gi|172048701|sp|A6MMP6|RR3_DIOEL RecName: Full=30S ribosomal protein S3, chloroplastic
gi|148668084|gb|ABR01468.1| ribosomal protein S3 [Dioscorea elephantipes]
Length = 216
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 76/214 (35%), Positives = 129/214 (60%), Gaps = 11/214 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + +S WFA+ + L ED KIR ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHHSFWFAQPRNFSTGLQEDEKIRNSIKNYIQKNRRISSGFEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A+I I++ ++I++ P L+I + IE+++ +K + +N + +++ V KP
Sbjct: 61 ARIRIKKRIDLIQVIIHIGFPNLLIEGRTRGIEELQINVQKEFHFSNRRLKIAITRVEKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
A ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E
Sbjct: 121 YEQANILAEYIALQLKNRVSFRKAMKKAIELTEQTDTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
EGRVPLQT+RA ID+ + T YG GIK+++
Sbjct: 181 EGRVPLQTIRAKIDHCSYTIRTIYGVLGIKIWIF 214
>gi|67458676|ref|YP_246300.1| 30S ribosomal protein S3 [Rickettsia felis URRWXCal2]
gi|75536859|sp|Q4UMS3|RS3_RICFE RecName: Full=30S ribosomal protein S3
gi|67004209|gb|AAY61135.1| 30S ribosomal protein S3 [Rickettsia felis URRWXCal2]
Length = 217
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 94/210 (44%), Positives = 142/210 (67%), Gaps = 5/210 (2%)
Query: 1 MGQKINPILFRLG--VNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIE 58
MGQK+ FR+G + W+S +A Y L +DLKIR+ + QA V+++LIE
Sbjct: 1 MGQKVCAHGFRVGPTLIKGWDSVLYAE-KHYKTLFIQDLKIRDLINKGFNQAQVSRVLIE 59
Query: 59 RTHKNCRII-VYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLI 116
R II + + +P +IIG+ G++I+KI+K + MT+ E++++++EV K I+A ++
Sbjct: 60 RPSNKSIIININAKKPNIIIGRNGSEIDKIKKAIEKMTSLKEVYINIHEVRKFNIDAAIV 119
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QLE+RV FR+AMK A+Q++ + G G++V SGRL GAE++RTE Y+EGR+PL
Sbjct: 120 AQTIALQLEKRVSFRKAMKTAIQASFKQGGQGIRVSCSGRLGGAEIARTEWYIEGRMPLH 179
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
TLRA IDY TA A T YG G+KV++ +
Sbjct: 180 TLRADIDYSTAEAITTYGIIGVKVWIYKGE 209
>gi|114107085|ref|YP_740241.1| ribosomal protein S3 [Liriodendron tulipifera]
gi|122239938|sp|Q0G9I0|RR3_LIRTU RecName: Full=30S ribosomal protein S3, chloroplastic
gi|113201033|gb|ABI32548.1| ribosomal protein S3 [Liriodendron tulipifera]
Length = 219
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 78/219 (35%), Positives = 130/219 (59%), Gaps = 12/219 (5%)
Query: 1 MGQKINPILFRLGV-NCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------G 51
MGQKINP+ FRLG N S WFA+ Y L ED KIR+ ++ ++++ G
Sbjct: 1 MGQKINPLGFRLGGENQKHRSLWFAQPKSYSIGLQEDEKIRDCIKNYVQKNMRISSGFEG 60
Query: 52 VAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPK 108
+A I I++ ++I+Y P L+I + IE+++ +K + N +++++ V K
Sbjct: 61 IAHIEIKKKIDLIQVIIYIGFPNLLIEGRTRGIEELQINVQKGFHSVNRRLNIAITRVAK 120
Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168
P ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E
Sbjct: 121 PYGQPNILAEYIALQLKNRVSFRKAMKKAIELTEQADTKGIQVQIAGRIDGKEIARVEWI 180
Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA ID+ + T YG GIK+++ + ++
Sbjct: 181 REGRVPLQTIRAKIDHCSYTVRTIYGVLGIKIWIFVDEQ 219
>gi|189183957|ref|YP_001937742.1| 30S ribosomal protein S3 [Orientia tsutsugamushi str. Ikeda]
gi|226697740|sp|B3CT11|RS3_ORITI RecName: Full=30S ribosomal protein S3
gi|189180728|dbj|BAG40508.1| 30S ribosomal protein S3 [Orientia tsutsugamushi str. Ikeda]
Length = 219
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 95/210 (45%), Positives = 139/210 (66%), Gaps = 3/210 (1%)
Query: 1 MGQKINPILFRLGVN--CTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILI- 57
MGQK+NP +FR G N W S +A + Y L + LKIR+ + A + KILI
Sbjct: 1 MGQKVNPCIFRTGPNLPRNWESVLYANKNNYSDFLLKILKIRKIINTEYSFAQITKILIE 60
Query: 58 ERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117
+ KN + +Y+ + G+IIGK G DIEK+++ ++ +T++++ +++ EV KPE+ IA
Sbjct: 61 WPSSKNIVVNIYAKKIGVIIGKSGGDIEKLKQNIAKITSADVSINICEVKKPELEEAFIA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
Q+IAQQLERR F++ MK+A+ ++M+ GA G+K+I SGRL G E++R+E Y EGRVPLQT
Sbjct: 121 QTIAQQLERRQSFKKVMKKAIHASMKQGAKGIKIICSGRLGGVEIARSESYKEGRVPLQT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
+RA I Y A A T YG G+KV+V D
Sbjct: 181 IRADIRYAFAEAITTYGVIGVKVWVYRCDV 210
>gi|172045671|sp|A8F2E1|RS3_RICM5 RecName: Full=30S ribosomal protein S3
Length = 217
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 92/210 (43%), Positives = 142/210 (67%), Gaps = 5/210 (2%)
Query: 1 MGQKINPILFRLG--VNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIE 58
MGQK+ FR+G + W+S +A Y L +DLKIR+ + QA ++++LIE
Sbjct: 1 MGQKVCAHGFRVGPTLIKGWDSVLYAE-KHYKTLFIQDLKIRDVINKGFNQAQISRVLIE 59
Query: 59 RTHKNCRII-VYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLI 116
R II + + +P +IIG+ G++I+K++K + MT+ E++++++EV K I+A ++
Sbjct: 60 RPSNKSIIININAKKPNIIIGRNGSEIDKLKKAIEKMTSLKEVYINIHEVRKFNIDAAIV 119
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QLE+RV FR+AMK A+Q++ + G G++V SGRL GAE++RTE Y+EGR+PL
Sbjct: 120 AQTIALQLEKRVSFRKAMKTAIQASFKQGGQGIRVSCSGRLGGAEIARTEWYIEGRMPLH 179
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
TLRA IDY TA A T YG G+KV++ +
Sbjct: 180 TLRADIDYSTAEAITTYGVIGVKVWIYKGE 209
>gi|15604499|ref|NP_221017.1| 30S ribosomal protein S3 [Rickettsia prowazekii str. Madrid E]
gi|6226102|sp|Q9ZCR1|RS3_RICPR RecName: Full=30S ribosomal protein S3
gi|3861193|emb|CAA15093.1| 30S RIBOSOMAL PROTEIN S3 (rpsC) [Rickettsia prowazekii]
gi|292572281|gb|ADE30196.1| 30S ribosomal protein S3 [Rickettsia prowazekii Rp22]
Length = 217
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 95/216 (43%), Positives = 143/216 (66%), Gaps = 5/216 (2%)
Query: 1 MGQKINPILFRLG--VNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIE 58
MGQK+ FR+G + W+S +A Y L +DLKIR+ + QA ++++LIE
Sbjct: 1 MGQKVCAHGFRVGPTLIKDWDSILYAE-KHYKTLFIQDLKIRDLINKWFNQAQISRVLIE 59
Query: 59 RTHKNCRII-VYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLI 116
R II + + +P +IIGK GT+I+K++K + NMT E++++++EV K I+A ++
Sbjct: 60 RPSNKSIIININAKKPNIIIGKNGTEIDKLKKAIENMTFLKEVYINIHEVRKFNIDAAIV 119
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QLE+RV FR+AMK A+Q++ + G G++V SGRL GAE++RTE Y+EGR+PL
Sbjct: 120 AQTIAAQLEKRVSFRKAMKTAIQASFKQGGQGIRVSCSGRLGGAEIARTEWYIEGRMPLH 179
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
TLRA IDY TA A T YG G+KV++ + +
Sbjct: 180 TLRADIDYSTAEAITTYGVIGVKVWIYKGEYKENKR 215
>gi|51473833|ref|YP_067590.1| 30S ribosomal protein S3 [Rickettsia typhi str. Wilmington]
gi|61215499|sp|Q68W84|RS3_RICTY RecName: Full=30S ribosomal protein S3
gi|51460145|gb|AAU04108.1| 30S ribosomal protein S3 [Rickettsia typhi str. Wilmington]
Length = 217
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 94/216 (43%), Positives = 143/216 (66%), Gaps = 5/216 (2%)
Query: 1 MGQKINPILFRLG--VNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIE 58
MGQK+ FR+G + W+S +A Y L +DLKIR+ + QA ++++LIE
Sbjct: 1 MGQKVCAHGFRVGPTLIKDWDSILYAE-KHYKTLFIQDLKIRDLINKWFNQAQISRVLIE 59
Query: 59 RTHKNCRII-VYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLI 116
R II + + +P +IIGK G++I+K++K + NMT E++++++EV K I+A ++
Sbjct: 60 RPSNKSIIININAKKPNIIIGKNGSEIDKLKKAIENMTFLKEVYINIHEVRKFNIDAAIV 119
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QLE+RV FR+AMK A+Q++ + G G++V SGRL GAE++RTE Y+EGR+PL
Sbjct: 120 AQTIAAQLEKRVSFRKAMKTAIQASFKQGGQGIRVSCSGRLGGAEIARTEWYIEGRMPLH 179
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
TLRA IDY TA A T YG G+KV++ + +
Sbjct: 180 TLRADIDYSTAEAITTYGVIGVKVWIYKGEYKENKR 215
>gi|108796849|ref|YP_636422.1| ribosomal protein S3 [Staurastrum punctulatum]
gi|91207778|sp|Q32RV4|RR3_STAPU RecName: Full=30S ribosomal protein S3, chloroplastic
gi|61393617|gb|AAX45758.1| ribosomal protein S3 [Staurastrum punctulatum]
Length = 219
Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 88/216 (40%), Positives = 129/216 (59%), Gaps = 13/216 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLK--------IREYLQCHLKQAGV 52
MGQKI+P+ FRLGV + S W + S+Y LL ED K +R+Y++ G+
Sbjct: 1 MGQKIHPLGFRLGVTQSHLSNWCVQPSQYSELLQEDEKLRGCIKEYVRKYVRTAENYGGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVN----EVPK 108
+I I+R ++ +++ P L + K G +++IR+++ N HL EV K
Sbjct: 61 DRIEIQRKTSAIKVEIHTGFPKLFVEKLGPRLKEIRREMQNTLQKSKHLKFIISLAEVEK 120
Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGA-DGVKVIASGRLNGAELSRTEC 167
P AT++A+ IA Q+ERRV FR+ +K+A+Q A G G+K+ +GRLNGAE++R+E
Sbjct: 121 PYAKATILAEYIAVQVERRVAFRKTIKKAIQLAKEQGNVKGIKIQIAGRLNGAEIARSEW 180
Query: 168 YLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
EGRVPLQTLRA IDY A T YG GI+V++
Sbjct: 181 AREGRVPLQTLRAQIDYCHYPAHTIYGVLGIRVWIF 216
>gi|22711972|ref|NP_683840.1| ribosomal protein S3 [Chaetosphaeridium globosum]
gi|27734480|sp|Q8M9V0|RR3_CHAGL RecName: Full=30S ribosomal protein S3, chloroplastic
gi|22416976|gb|AAM96576.1| ribosomal protein S3 [Chaetosphaeridium globosum]
Length = 255
Score = 209 bits (531), Expect = 4e-52, Method: Composition-based stats.
Identities = 87/252 (34%), Positives = 131/252 (51%), Gaps = 46/252 (18%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------------QCHLK 48
MGQK+NP+ FRLGV +S WFA ++ L ED KIR Y+
Sbjct: 1 MGQKVNPLGFRLGVTQEHHSYWFATNKQFAGFLEEDQKIRHYIYQYVQKHIRESSNTSYG 60
Query: 49 QAGVAKILIERTHKNCRIIVYSA-RPGLIIGKKGTDIEKIRKKLSN-------------- 93
+GV+KI I+R + + ++++ P L+I + + + + K +
Sbjct: 61 YSGVSKIEIKRDTELIHVEIHTSGFPALLIKGQIKEKNRDKNKSNKNSALDQSVNKNQNK 120
Query: 94 ------------------MTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMK 135
++N + +++++V P A ++A+ IA+QLE RV FRRAMK
Sbjct: 121 NTGQELEKMWRYVQRSLTLSNGKFRMTLSKVSNPYKEANIVAEYIARQLENRVAFRRAMK 180
Query: 136 RAVQSAMRFGA-DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
+A++ A G G+K+ SGRLNGAE++R E EGRVPLQTLRA IDY A+T YG
Sbjct: 181 QAIKDAKENGQVKGIKIQISGRLNGAEIARVEWAREGRVPLQTLRAKIDYCHYPAQTKYG 240
Query: 195 SCGIKVYVSLRD 206
GIKV++ +
Sbjct: 241 VLGIKVWIFQGE 252
>gi|15644242|ref|NP_229294.1| ribosomal protein S3 [Thermotoga maritima MSB8]
gi|1173254|sp|P46772|RS3_THEMA RecName: Full=30S ribosomal protein S3
gi|4982058|gb|AAD36560.1|AE001798_25 ribosomal protein S3 [Thermotoga maritima MSB8]
gi|581804|emb|CAA79783.1| ribosomal protein S3 [Thermotoga maritima]
Length = 209
Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats.
Identities = 93/207 (44%), Positives = 143/207 (69%), Gaps = 2/207 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P FRLG++ W ++WF Y L ED +IR+ ++ AG+++I +ER
Sbjct: 1 MGQKVHPRGFRLGLSADWQAKWF-NEKNYKEWLLEDEEIRKIIKNKYYHAGISEIYVERP 59
Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
+ I V +ARPG+IIG+KG++I +R++L N + +++ E+ PE++A L+A+S
Sbjct: 60 DAERINITVKTARPGIIIGRKGSEITSLREELERKFNRRVVINIEEIKTPELDAQLVAES 119
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
IA ++E+R ++ AMKRA+ +AMR GA G+KV+ +GRL GAE++R E YL GR+PLQ ++
Sbjct: 120 IASRIEKRASYKVAMKRAIMNAMRKGAQGIKVMVAGRLGGAEIARREWYLRGRLPLQKIK 179
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRD 206
A IDYGTA A T YG+ GIKV++ D
Sbjct: 180 AIIDYGTATAWTKYGTIGIKVWIYKGD 206
>gi|224531795|ref|ZP_03672427.1| ribosomal protein S3 [Borrelia valaisiana VS116]
gi|224511260|gb|EEF81666.1| ribosomal protein S3 [Borrelia valaisiana VS116]
Length = 291
Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats.
Identities = 82/214 (38%), Positives = 129/214 (60%), Gaps = 3/214 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK++P R+ +N W S+W+ Y +LHED IR + LK IE
Sbjct: 1 MGQKVHPYSLRVKINKDWKSKWYFDKKLYSTILHEDFLIRLEIMKFLKGIKFDISDIEII 60
Query: 60 --THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117
+ +++ + RPG +IG KG+++EKI + L+ + +I + + EV +PE++A +IA
Sbjct: 61 RNNPQKVTVVIVTPRPGSVIGLKGSNLEKIGQLLTKKISKKISIKIKEVKRPELDAQIIA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
IA+Q+E RV +R+ +K A+ ++M GA G+K+ +GRL GAE++R+ EGRVPL T
Sbjct: 121 NGIAKQVENRVSYRKVLKSALSTSMLKGAQGLKIKIAGRLGGAEIARSFEVKEGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
LRA IDYG + A T YG G+KV++ + +
Sbjct: 181 LRADIDYGFSEARTTYGIIGVKVWLFKGEVLGRQ 214
>gi|290487106|gb|ADD29937.1| ribosomal protein S3 [Ximenia americana]
Length = 218
Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats.
Identities = 76/218 (34%), Positives = 128/218 (58%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG S WFA+ ++ L ED KIR ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQDHYSLWFAQPKKFSEGLQEDQKIRNCIKNYVQKNMRMLSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK---IRKKLSNMTNSEIHLSVNEVPKP 109
+I I++ ++I+Y P L+I K IE+ +K N N ++++++ + KP
Sbjct: 61 ERIEIQKRIDLIQVIIYMGFPKLLIEGKPRGIEELQINIQKELNYVNRKLNIAITRIVKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ +A+ I QL+ RV FR+AMK+A++ A + G++V +GR++G E++R E
Sbjct: 121 YGHPNNLAKFITGQLKNRVSFRKAMKKAIELAEQADTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT++A +DY + T YG+ GIK+++ +E
Sbjct: 181 EGRVPLQTIQAKMDYCSYPIRTIYGAFGIKIWLFTAEE 218
>gi|124494179|gb|ABN13135.1| ribosomal protein S3 [Almond witches'-broom phytoplasma]
Length = 245
Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats.
Identities = 78/215 (36%), Positives = 123/215 (57%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ W S+W+A + L++ED KIR ++ + +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIQNWRSQWYAEDKQVPNLVYEDFKIRTLIKKFYIRGIISEIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +++++ GL+ G + K+ +K+ N +I L+V EV + A+L+
Sbjct: 61 KKSNSEEITINLFTSKIGLVQGADNKEKNKLLQKIEKTINKKILLNVFEVKTIDKIASLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ++A QL++R FR K Q ++ GA GVK+I SGRL GAE++R E G VPL
Sbjct: 121 AQNVAMQLQQRSYFRAVQKITTQKVLKSGAKGVKIILSGRLGGAEIARRETISLGLVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
T RA IDY A T YG G++V++ + + +
Sbjct: 181 TFRADIDYAFEEAHTTYGVLGVQVWIFHGEVLPNK 215
>gi|239948313|ref|ZP_04700066.1| ribosomal protein S3 [Rickettsia endosymbiont of Ixodes scapularis]
gi|239922589|gb|EER22613.1| ribosomal protein S3 [Rickettsia endosymbiont of Ixodes scapularis]
Length = 217
Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats.
Identities = 91/210 (43%), Positives = 142/210 (67%), Gaps = 5/210 (2%)
Query: 1 MGQKINPILFRLG--VNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIE 58
MGQK+ FR+G + W+S +A Y L +DLKIR+ + QA ++++LIE
Sbjct: 1 MGQKVCAHGFRVGPTLIKGWDSVLYAE-KHYKTLFIQDLKIRDLINKGFNQAQISRVLIE 59
Query: 59 RTHKNCRII-VYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLI 116
R II + + +P +IIG+ G++I+K++K + MT+ E++++++EV K I+A ++
Sbjct: 60 RPSNKSIIININAKKPNIIIGRNGSEIDKLKKAIEKMTSLKEVYINIHEVRKFNIDAAIV 119
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA Q+E+RV FR+AMK A+Q++ + G G++V SGRL GAE++RTE Y+EGR+PL
Sbjct: 120 AQTIALQIEKRVSFRKAMKTAIQASFKQGGQGIRVNCSGRLGGAEIARTEWYIEGRMPLH 179
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
TLRA IDY TA A T YG G+KV++ +
Sbjct: 180 TLRADIDYSTAEAITTYGVIGVKVWIYKGE 209
>gi|15829052|ref|NP_326412.1| 30S ribosomal protein S3 [Mycoplasma pulmonis UAB CTIP]
gi|27734528|sp|Q98PY8|RS3_MYCPU RecName: Full=30S ribosomal protein S3
gi|14089996|emb|CAC13754.1| 30S RIBOSOMAL PROTEIN S3 [Mycoplasma pulmonis]
Length = 217
Score = 207 bits (528), Expect = 7e-52, Method: Composition-based stats.
Identities = 83/217 (38%), Positives = 131/217 (60%), Gaps = 4/217 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FR G+ N+ W+A ++ L ED KI ++ + ++Q + K+ I+R
Sbjct: 1 MGQKVNPNGFRYGITKQHNAIWYAEKKDFSKFLLEDQKIHQFFEKLVRQYLIGKVEIKRD 60
Query: 61 HKNCR-IIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLI 116
K + V+SA+ G ++G++G +I+ + +K N +I + V + +PE+NA L+
Sbjct: 61 QKGRVFVGVHSAKRGAMLGQEGKNIQTLTASLQKFLRQKNKDIKIDVINIDQPELNARLL 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
A+ IA LE R FR A K A++++++ GA G+K SGRLNG +++RTE Y EG + L
Sbjct: 121 AEQIAVDLENRKPFRIAQKFAIRNSLKAGAKGIKTAVSGRLNGVDMARTEGYTEGEMKLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
TLR +DY A A T YG+ GIKV+VSL + +
Sbjct: 181 TLRQKVDYAQATARTTYGAIGIKVWVSLGEILDGGKQ 217
>gi|225551908|ref|ZP_03772848.1| ribosomal protein S3 [Borrelia sp. SV1]
gi|225370906|gb|EEH00336.1| ribosomal protein S3 [Borrelia sp. SV1]
Length = 293
Score = 207 bits (528), Expect = 7e-52, Method: Composition-based stats.
Identities = 81/214 (37%), Positives = 131/214 (61%), Gaps = 3/214 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK++P R+ +N W S+W+ Y A+LHED IR + LK IE
Sbjct: 1 MGQKVHPYSLRVKINKDWKSKWYFDKKLYSAILHEDFLIRREIMKFLKGIKFDISDIEII 60
Query: 60 --THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117
+ +++ + RPG +IG KG+++EKI + L+ + +I + + EV +PE++A +IA
Sbjct: 61 RNNPQKVTVVIVTPRPGSVIGLKGSNLEKIGQLLTKKISKKISIKIKEVKRPELDAQIIA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
IA+Q+E R +R+ +K ++ ++M GA G+K+ +GRL GAE++R+ EGRVPL T
Sbjct: 121 NGIAKQIENRASYRKVLKSSLSTSMLKGAQGLKIKIAGRLGGAEIARSFEVKEGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
LRA+IDYG + A+T YG G+KV++ + +
Sbjct: 181 LRANIDYGFSEAQTTYGIIGVKVWLFKGEVLGRQ 214
>gi|313199601|ref|YP_004021216.1| ribosomal protein S3 [Isoetes flaccida]
gi|291575330|gb|ADE18043.1| ribosomal protein S3 [Isoetes flaccida]
Length = 220
Score = 207 bits (528), Expect = 7e-52, Method: Composition-based stats.
Identities = 76/220 (34%), Positives = 126/220 (57%), Gaps = 13/220 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA---------G 51
MGQK+NP+ FRLG+ +S WFA+ Y L ED ++R ++ ++ + G
Sbjct: 1 MGQKVNPLSFRLGITKNHHSHWFAQPKIYSEYLQEDERVRNCIENYVHRHIINSSNYRVG 60
Query: 52 VAKILIERTHKNCRIIVYSARPGLIIGK-KGTDIEKIRKK-LSNMTNS--EIHLSVNEVP 107
+A++ I+R + +++ P L+I G IE++++ N+ N +H+++ E+
Sbjct: 61 IARVEIQRKTDLLLVEIHTEFPALLIESSHGQGIEQLKRDVQRNLLNRIQRVHITLTEIA 120
Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTEC 167
++A+ IA QL RV FRR ++A++ + G+K+ +GRLNGAE++R E
Sbjct: 121 GTYGEPNILAKYIALQLRSRVAFRRITRKAIELEKKKNIKGIKIQIAGRLNGAEIARVEW 180
Query: 168 YLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQTLRA IDY A+T +G GIKV++ ++
Sbjct: 181 AREGRVPLQTLRAQIDYCYYPAKTIHGILGIKVWIFRDEQ 220
>gi|242910209|ref|YP_002970683.1| ribosomal protein S3 [Alsophila spinulosa]
gi|218454878|gb|ACK77215.1| ribosomal protein S3 [Alsophila spinulosa]
Length = 228
Score = 207 bits (528), Expect = 7e-52, Method: Composition-based stats.
Identities = 78/219 (35%), Positives = 129/219 (58%), Gaps = 11/219 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MG+KI+P+ FRLGVN S FA+ +Y L ED KIR ++ ++++ G+
Sbjct: 1 MGRKIHPLGFRLGVNQKHYSYRFAQMEDYPKFLEEDRKIRTSIEKYVEKHVKDSSNYGGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPKP 109
I I+R RI +++ P L++ + I++++ + +M N ++ +++N V +P
Sbjct: 61 GHIEIQRKTDPIRIEIHTGFPDLLVEEHSLGIDQMKSDIEHMLGLGNRKLRITLNNVTQP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
++A+ +A QL+ RV FRR MKRA++ R G+K+ +GRLNG+E++R E
Sbjct: 121 YGEPKILAEHVASQLKNRVAFRRTMKRAIELVGRTSNKGIKIQIAGRLNGSEMARVEWAR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208
EGRVPLQT+RA I Y A+T +G GIK+++ E+
Sbjct: 181 EGRVPLQTIRARISYCYHPAQTIHGVLGIKIWIFRDTEL 219
>gi|329905170|ref|ZP_08274066.1| SSU ribosomal protein S3p (S3e) [Oxalobacteraceae bacterium
IMCC9480]
gi|327547681|gb|EGF32468.1| SSU ribosomal protein S3p (S3e) [Oxalobacteraceae bacterium
IMCC9480]
Length = 254
Score = 207 bits (528), Expect = 8e-52, Method: Composition-based stats.
Identities = 101/184 (54%), Positives = 135/184 (73%)
Query: 32 LLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKL 91
+L EDLK+R YL+ LK A V +++IER KN RI +YS+RPG++IGKKG DIE ++ L
Sbjct: 1 MLIEDLKVRAYLKTKLKNASVGRVVIERPAKNARITIYSSRPGVVIGKKGEDIEVLKTAL 60
Query: 92 SNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKV 151
M +H+++ E+ KPE +A LIA SIAQQLE+R++FRRAMKRA+Q+AMR GA G+K+
Sbjct: 61 GKMMGVPVHVNIEEIRKPETDAQLIADSIAQQLEKRIMFRRAMKRAMQNAMRLGAQGIKI 120
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
++SGRLNG E++R E Y EGRVPL TLRA IDYG A T YG GIKV+V D ++
Sbjct: 121 MSSGRLNGIEIARKEWYREGRVPLHTLRADIDYGFGEALTTYGIIGIKVWVYKGDRLASG 180
Query: 212 DSTI 215
++
Sbjct: 181 ETPT 184
>gi|111115313|ref|YP_709931.1| 30S ribosomal protein S3 [Borrelia afzelii PKo]
gi|216263335|ref|ZP_03435330.1| ribosomal protein S3 [Borrelia afzelii ACA-1]
gi|123341333|sp|Q0SN23|RS3_BORAP RecName: Full=30S ribosomal protein S3
gi|110890587|gb|ABH01755.1| ribosomal protein S3 [Borrelia afzelii PKo]
gi|215980179|gb|EEC21000.1| ribosomal protein S3 [Borrelia afzelii ACA-1]
Length = 291
Score = 207 bits (528), Expect = 8e-52, Method: Composition-based stats.
Identities = 82/214 (38%), Positives = 130/214 (60%), Gaps = 3/214 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK++P R+ +N W S+W+ Y +LHED IR + LK IE
Sbjct: 1 MGQKVHPYSLRVKINKDWKSKWYFDKKLYSTILHEDFLIRLEIMKFLKGIKFDISDIEII 60
Query: 60 --THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117
+ +++ + RPG +IG KG+++EKI + L+ + +I + + EV +PE++A +IA
Sbjct: 61 RNNPQKVTVVIVTPRPGSVIGLKGSNLEKIGQLLTKKISKKISIKIKEVKRPELDAQIIA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
IA+Q+E RV +R+ +K A+ ++M GA G+K+ +GRL GAE++R+ EGRVPL T
Sbjct: 121 NGIAKQVENRVSYRKVLKSALSTSMLKGAQGLKIKIAGRLGGAEIARSFEVKEGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
LRA+IDYG + A T YG G+KV++ + +
Sbjct: 181 LRANIDYGFSEAHTTYGIIGVKVWLFKGEVLGRQ 214
>gi|223888950|ref|ZP_03623541.1| ribosomal protein S3 [Borrelia burgdorferi 64b]
gi|225548608|ref|ZP_03769655.1| ribosomal protein S3 [Borrelia burgdorferi 94a]
gi|223885766|gb|EEF56865.1| ribosomal protein S3 [Borrelia burgdorferi 64b]
gi|225370638|gb|EEH00074.1| ribosomal protein S3 [Borrelia burgdorferi 94a]
Length = 293
Score = 207 bits (527), Expect = 9e-52, Method: Composition-based stats.
Identities = 81/214 (37%), Positives = 131/214 (61%), Gaps = 3/214 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK++P R+ +N W S+W+ Y A+LHED IR + LK IE
Sbjct: 1 MGQKVHPYSLRVKINKDWKSKWYFDKKLYSAILHEDFLIRREIMKFLKGIKFDISDIEII 60
Query: 60 --THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117
+ +++ + RPG +IG KG+++EKI + L+ + +I + + EV +PE++A +IA
Sbjct: 61 RNNPQKVTVVIVTPRPGSVIGLKGSNLEKIGQLLTKKISKKISIKIKEVKRPELDAQIIA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
IA+Q+E R +R+ +K ++ ++M GA G+K+ +GRL GAE++R+ EGRVPL T
Sbjct: 121 NGIAKQVENRASYRKVLKSSLSTSMLKGAQGLKIKIAGRLGGAEIARSFEVKEGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
LRA+IDYG + A+T YG G+KV++ + +
Sbjct: 181 LRANIDYGFSEAQTTYGIIGVKVWLFKGEVLGRQ 214
>gi|224532510|ref|ZP_03673135.1| ribosomal protein S3 [Borrelia burgdorferi WI91-23]
gi|224512582|gb|EEF82958.1| ribosomal protein S3 [Borrelia burgdorferi WI91-23]
Length = 293
Score = 207 bits (527), Expect = 9e-52, Method: Composition-based stats.
Identities = 82/214 (38%), Positives = 131/214 (61%), Gaps = 3/214 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK++P R+ +N W S+W+ Y A+LHED IR + LK IE
Sbjct: 1 MGQKVHPYSLRVKINKDWKSKWYFDKKLYSAILHEDFLIRREIMKFLKGIKFDISDIEII 60
Query: 60 --THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117
+ +++ + RPG +IG KG+++EKI + L+ + +I + V EV +PE++A +IA
Sbjct: 61 RNNPQKVTVVIVTPRPGSVIGLKGSNLEKIGQLLTKKISKKISIKVKEVKRPELDAQIIA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
IA+Q+E R +R+ +K ++ ++M GA G+K+ +GRL GAE++R+ EGRVPL T
Sbjct: 121 NGIAKQVENRASYRKVLKSSLSASMLKGAQGLKIKIAGRLGGAEIARSFEVKEGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
LRA+IDYG + A+T YG G+KV++ + +
Sbjct: 181 LRANIDYGFSEAQTTYGIIGVKVWLFKGEVLGRQ 214
>gi|313622223|gb|EFR92744.1| ribosomal protein S3 [Listeria innocua FSL J1-023]
Length = 192
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 81/192 (42%), Positives = 128/192 (66%)
Query: 28 EYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKI 87
+Y LHEDL+IR+Y+ L A V+++ IER I +++A+PG++IGK G+++E +
Sbjct: 1 DYADFLHEDLRIRDYVAKRLSDASVSRVEIERAANRVNITIHTAKPGMVIGKGGSEVEAL 60
Query: 88 RKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGAD 147
RK L+ +T +H+++ E+ + +++A L+A++IA+QLE RV FRRA K+A+Q MR GA
Sbjct: 61 RKNLNELTQKRVHINIVEIKRADLDAKLVAENIARQLEGRVSFRRAQKQAIQRTMRAGAK 120
Query: 148 GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
G+K SGRL GA+++R E Y EG VPL TLRA IDY A+T YG G+KV++ +
Sbjct: 121 GIKTQVSGRLGGADIARAEHYSEGTVPLHTLRADIDYAWEEADTTYGKLGVKVWIYRGEV 180
Query: 208 VSDSDSTIPAAE 219
+ + + +
Sbjct: 181 LPTKKNNVEGGK 192
>gi|15594829|ref|NP_212618.1| 30S ribosomal protein S3 [Borrelia burgdorferi B31]
gi|195941621|ref|ZP_03087003.1| 30S ribosomal protein S3 [Borrelia burgdorferi 80a]
gi|216264617|ref|ZP_03436609.1| ribosomal protein S3 [Borrelia burgdorferi 156a]
gi|218249924|ref|YP_002374994.1| ribosomal protein S3 [Borrelia burgdorferi ZS7]
gi|221218009|ref|ZP_03589475.1| ribosomal protein S3 [Borrelia burgdorferi 72a]
gi|224533550|ref|ZP_03674139.1| ribosomal protein S3 [Borrelia burgdorferi CA-11.2a]
gi|225549467|ref|ZP_03770433.1| ribosomal protein S3 [Borrelia burgdorferi 118a]
gi|226321116|ref|ZP_03796658.1| ribosomal protein S3 [Borrelia burgdorferi 29805]
gi|226321794|ref|ZP_03797320.1| ribosomal protein S3 [Borrelia burgdorferi Bol26]
gi|3915862|sp|P94273|RS3_BORBU RecName: Full=30S ribosomal protein S3
gi|226697666|sp|B7J249|RS3_BORBZ RecName: Full=30S ribosomal protein S3
gi|2688407|gb|AAC66858.1| ribosomal protein S3 (rpsC) [Borrelia burgdorferi B31]
gi|215981090|gb|EEC21897.1| ribosomal protein S3 [Borrelia burgdorferi 156a]
gi|218165112|gb|ACK75173.1| ribosomal protein S3 [Borrelia burgdorferi ZS7]
gi|221191957|gb|EEE18178.1| ribosomal protein S3 [Borrelia burgdorferi 72a]
gi|224513223|gb|EEF83585.1| ribosomal protein S3 [Borrelia burgdorferi CA-11.2a]
gi|225369744|gb|EEG99191.1| ribosomal protein S3 [Borrelia burgdorferi 118a]
gi|226232983|gb|EEH31736.1| ribosomal protein S3 [Borrelia burgdorferi Bol26]
gi|226233526|gb|EEH32265.1| ribosomal protein S3 [Borrelia burgdorferi 29805]
Length = 293
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 81/214 (37%), Positives = 131/214 (61%), Gaps = 3/214 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK++P R+ +N W S+W+ Y A+LHED IR + LK IE
Sbjct: 1 MGQKVHPYSLRVKINKDWKSKWYFDKKLYSAILHEDFLIRREIMKFLKGIKFDISDIEII 60
Query: 60 --THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117
+ +++ + RPG +IG KG+++EKI + L+ + +I + + EV +PE++A +IA
Sbjct: 61 RNNPQKVTVVIVTPRPGSVIGLKGSNLEKIGQLLTKKISKKISIKIKEVKRPELDAQIIA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
IA+Q+E R +R+ +K ++ ++M GA G+K+ +GRL GAE++R+ EGRVPL T
Sbjct: 121 NGIAKQVENRASYRKVLKSSLSTSMLKGAQGLKIKIAGRLGGAEIARSFEVKEGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
LRA+IDYG + A+T YG G+KV++ + +
Sbjct: 181 LRANIDYGFSEAQTTYGIIGVKVWLFKGEVLGRQ 214
>gi|261749464|ref|YP_003257150.1| putative 30S ribosomal protein S3 [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
gi|261497557|gb|ACX84007.1| putative 30S ribosomal protein S3 [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
Length = 235
Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 94/216 (43%), Positives = 143/216 (66%), Gaps = 4/216 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI+ RLG+ W S W + Y + ED K+R Y++ L + V++I IERT
Sbjct: 1 MGQKTNPIVNRLGIIMGWQSSWC---NNYKDRIQEDFKVRRYIEARLPKGIVSRIFIERT 57
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I + ++RP L+IGK G +++ +RK+L +T E+ ++++EV +PE++A LIA+S+
Sbjct: 58 LKFITITIRTSRPALVIGKGGDEVDTVRKELKKLTKKEVQINISEVRRPELDAPLIAKSL 117
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
+QLE R+ +++A+K ++ SAMR A G+K+ SGRLNGAE++R E Y EGR+ L T RA
Sbjct: 118 VRQLENRISYKKAIKLSILSAMRMNAQGIKIQISGRLNGAEMARCESYKEGRISLGTFRA 177
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
+DY AVA T YGS G+KV++ + E+ P
Sbjct: 178 DVDYHIAVAHTVYGSIGVKVWIM-KGEIYGKRELSP 212
>gi|312148230|gb|ADQ30889.1| ribosomal protein S3 [Borrelia burgdorferi JD1]
Length = 293
Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 81/214 (37%), Positives = 131/214 (61%), Gaps = 3/214 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK++P R+ +N W S+W+ Y A+LHED IR + LK IE
Sbjct: 1 MGQKVHPYSLRVKINKDWKSKWYFDKKLYSAILHEDFLIRREIMKFLKGIKFDISDIEII 60
Query: 60 --THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117
+ +++ + RPG +IG KG+++EKI + L+ + +I + + EV +PE++A +IA
Sbjct: 61 RNNPQKVTVVIVTPRPGSVIGLKGSNLEKIGQLLTKKISKKISIKIKEVKRPELDAQIIA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
IA+Q+E R +R+ +K ++ ++M GA G+K+ +GRL GAE++R+ EGRVPL T
Sbjct: 121 NGIAKQVENRASYRKVLKSSLSTSMLKGAQGLKIKIAGRLGGAEIARSFEVKEGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
LRA+IDYG + A+T YG G+KV++ + +
Sbjct: 181 LRANIDYGFSEAQTTYGIIGVKVWLFKGEVLGRQ 214
>gi|309322368|ref|YP_003934448.1| ribosomal protein S3 [Cathaya argyrophylla]
gi|307683294|dbj|BAJ19601.1| ribosomal protein S3 [Cathaya argyrophylla]
Length = 217
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 81/214 (37%), Positives = 127/214 (59%), Gaps = 12/214 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL--------KQAGV 52
M QKINP+ FRLGV S WFA+ Y L ED KIR ++ ++ G+
Sbjct: 1 MAQKINPLGFRLGVTQNDRSHWFAQQRNYSKDLREDHKIRTCIENYVRTHIKSSSNYGGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLI-IGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPK 108
A++ I R ++ +Y P L+ I +G IEK+R + +M + ++H+++ +V K
Sbjct: 61 ARVEIRRKIDLIQVKIYIGFPNLLLIEGRGQGIEKLRNDVLSMLDSVDRKLHIAIEKVTK 120
Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168
P N ++A+ IA QLE+R+ FR+ MK+A++ A R +G+++ +GRL+G E++R E
Sbjct: 121 PYGNPNILAEYIALQLEKRIPFRKTMKKAIELAEREDVEGIQIQIAGRLDGKEIARVEWD 180
Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202
GRVPLQT+RA IDY +T YG GIK+++
Sbjct: 181 RGGRVPLQTIRARIDYCYYPVQTIYGVLGIKIWI 214
>gi|307683497|dbj|BAJ19727.1| ribosomal protein S3 [Pseudotsuga sinensis var. wilsoniana]
Length = 217
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 84/214 (39%), Positives = 125/214 (58%), Gaps = 12/214 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL--------KQAGV 52
M QKINP+ FRLGV S WFA+ Y L ED KIR ++ ++ G+
Sbjct: 1 MAQKINPLGFRLGVTQNDRSHWFAQQRNYSKDLREDQKIRTCIENYVRTHIKSSSNYGGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLI-IGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPK 108
A++ I R +I +Y P L+ I +G IEK+R + NM N ++H+++ +V K
Sbjct: 61 ARVEIRRKIDLIQIKIYMGFPNLLLIEGRGQGIEKLRNDVLNMLNSVDRKLHIAIEKVAK 120
Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168
P ++A+ IA QLE RV FR+ MK+A++ A R +G+++ +GRL+G E++R E
Sbjct: 121 PYRKPNILAEYIALQLENRVPFRKTMKKAIELAEREDVEGIQIQIAGRLDGKEIARVEWD 180
Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202
GRVPLQT+RA IDY +T YG GIK+++
Sbjct: 181 RGGRVPLQTIRARIDYCYYPVQTIYGVLGIKIWI 214
>gi|91228954|ref|ZP_01262849.1| 30S ribosomal protein S3 [Vibrio alginolyticus 12G01]
gi|91187474|gb|EAS73811.1| 30S ribosomal protein S3 [Vibrio alginolyticus 12G01]
Length = 208
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 95/200 (47%), Positives = 136/200 (68%), Gaps = 1/200 (0%)
Query: 25 RGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDI 84
++ L D K+R++L LK+A +++I+IER K+ R+ +++ARPG++IGKKG D+
Sbjct: 1 NTKDFADNLDGDFKVRQFLTSELKKASLSRIVIERPAKSIRVTIHTARPGVVIGKKGEDV 60
Query: 85 EKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRF 144
EK+R ++ + +++ EV KPE++A L+ SIA QLERRV+FRRAMKRAVQ+AMR
Sbjct: 61 EKLRAAVAKIAGVPAQINIAEVRKPELDAQLVGDSIASQLERRVMFRRAMKRAVQNAMRL 120
Query: 145 GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
GA G+KV SGRL GAE++R+E Y EGRVPL TLRA IDY T+ A T YG GIK ++
Sbjct: 121 GAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRADIDYATSSAHTQYGVIGIKTWIF- 179
Query: 205 RDEVSDSDSTIPAAEHRVVE 224
+ E+ A E + +
Sbjct: 180 KGEILGGMPAANAVEPKGDK 199
>gi|11467230|ref|NP_043062.1| ribosomal protein S3 [Zea mays]
gi|48478711|ref|YP_024318.1| ribosomal protein S3 [Saccharum hybrid cultivar SP-80-3280]
gi|50812566|ref|YP_054668.1| ribosomal protein S3 [Saccharum officinarum]
gi|118614530|ref|YP_899446.1| ribosomal protein S3 [Sorghum bicolor]
gi|133933|sp|P06586|RR3_MAIZE RecName: Full=30S ribosomal protein S3, chloroplastic
gi|68052949|sp|Q6ENS5|RR3_SACOF RecName: Full=30S ribosomal protein S3, chloroplastic
gi|75126330|sp|Q6L3G0|RR3_SACHY RecName: Full=30S ribosomal protein S3, chloroplastic
gi|125987748|sp|A1E9W3|RR3_SORBI RecName: Full=30S ribosomal protein S3, chloroplastic
gi|12469|emb|CAA68427.1| ribosomal protein S3 [Zea mays]
gi|902260|emb|CAA60324.1| ribosomal protein S3 [Zea mays]
gi|48478613|gb|AAT44633.1| ribosomal protein S3 [Saccharum hybrid cultivar SP80-3280]
gi|49659550|dbj|BAD27331.1| ribosomal protein S3 [Saccharum hybrid cultivar NCo 310]
gi|118201164|gb|ABK79534.1| ribosomal protein S3 [Sorghum bicolor]
Length = 224
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 75/224 (33%), Positives = 124/224 (55%), Gaps = 17/224 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKME 60
Query: 52 -------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSV 103
+ I I++ +I++ P L+ K ++EK +K N N +++++
Sbjct: 61 SDSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEVNSVNQRLNIAI 120
Query: 104 NEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELS 163
+V +P ++A+ IA QL+ RV FR+AMK+A++ + G+K+ +GRL G E++
Sbjct: 121 EKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGIKIQIAGRLAGKEIA 180
Query: 164 RTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
R EC +GR+PLQT+RA IDY T YG G+K+++ + +E
Sbjct: 181 RAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLGVKIWIFVEEE 224
>gi|51598739|ref|YP_072927.1| 30S ribosomal protein S3 [Borrelia garinii PBi]
gi|61215484|sp|Q661D6|RS3_BORGA RecName: Full=30S ribosomal protein S3
gi|51573310|gb|AAU07335.1| ribosomal protein S3 [Borrelia garinii PBi]
Length = 292
Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 81/214 (37%), Positives = 131/214 (61%), Gaps = 3/214 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK++P R+ +N W S+W+ Y +LHED IR + LK IE
Sbjct: 1 MGQKVHPYSLRVKINKDWKSKWYFDKKLYSTILHEDFLIRLEIMKFLKGIKFDISDIEII 60
Query: 60 --THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117
+ +++ + RPG +IG KG+++EKI + L+ + +I + + EV +PE++A +IA
Sbjct: 61 RNNPQKVTVVIVTPRPGSVIGLKGSNLEKIGQLLTKKISKKISIKIKEVKRPELDAQIIA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
IA+Q+E RV +R+ +K ++ ++M GA G+K+ +GRL GAE++R+ EGRVPL T
Sbjct: 121 NGIAKQVENRVSYRKVLKSSLSTSMLKGAQGLKIKIAGRLGGAEIARSFEVKEGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
LRA+IDYG + A+T YG G+KV++ + +
Sbjct: 181 LRANIDYGFSEAQTTYGIIGVKVWLFKGEVLGRQ 214
>gi|157964800|ref|YP_001499624.1| 30S ribosomal protein S3 [Rickettsia massiliae MTU5]
gi|157844576|gb|ABV85077.1| 30S ribosomal protein S3 [Rickettsia massiliae MTU5]
Length = 226
Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 92/210 (43%), Positives = 142/210 (67%), Gaps = 5/210 (2%)
Query: 1 MGQKINPILFRLG--VNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIE 58
MGQK+ FR+G + W+S +A Y L +DLKIR+ + QA ++++LIE
Sbjct: 10 MGQKVCAHGFRVGPTLIKGWDSVLYAE-KHYKTLFIQDLKIRDVINKGFNQAQISRVLIE 68
Query: 59 RTHKNCRII-VYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLI 116
R II + + +P +IIG+ G++I+K++K + MT+ E++++++EV K I+A ++
Sbjct: 69 RPSNKSIIININAKKPNIIIGRNGSEIDKLKKAIEKMTSLKEVYINIHEVRKFNIDAAIV 128
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QLE+RV FR+AMK A+Q++ + G G++V SGRL GAE++RTE Y+EGR+PL
Sbjct: 129 AQTIALQLEKRVSFRKAMKTAIQASFKQGGQGIRVSCSGRLGGAEIARTEWYIEGRMPLH 188
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
TLRA IDY TA A T YG G+KV++ +
Sbjct: 189 TLRADIDYSTAEAITTYGVIGVKVWIYKGE 218
>gi|219685126|ref|ZP_03539946.1| ribosomal protein S3 [Borrelia garinii Far04]
gi|219673222|gb|EED30241.1| ribosomal protein S3 [Borrelia garinii Far04]
Length = 292
Score = 205 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 81/214 (37%), Positives = 131/214 (61%), Gaps = 3/214 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK++P R+ +N W S+W+ Y +LHED IR + LK IE
Sbjct: 1 MGQKVHPYSLRVKINKDWKSKWYFDKKLYSTILHEDFLIRLEIMKFLKGIKFDISDIEII 60
Query: 60 --THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117
+ +++ + RPG +IG KG+++EKI + L+ + +I + + EV +PE++A +IA
Sbjct: 61 RNNPQKVTVVIVTPRPGSVIGLKGSNLEKIGQLLTKKISKKISIKIKEVKRPELDAQIIA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
IA+Q+E RV +R+ +K ++ ++M GA G+K+ +GRL GAE++R+ EGRVPL T
Sbjct: 121 NGIAKQVENRVSYRKVLKSSLSTSMLKGAQGLKIKIAGRLGGAEIARSFEVKEGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
LRA+IDYG + A+T YG G+KV++ + +
Sbjct: 181 LRANIDYGFSEAQTTYGIIGVKVWLFKGEVLGRQ 214
>gi|260677457|ref|YP_003208225.1| ribosomal protein S3 [Coix lacryma-jobi]
gi|209361395|gb|ACI43310.1| ribosomal protein S3 [Coix lacryma-jobi]
Length = 224
Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats.
Identities = 77/224 (34%), Positives = 125/224 (55%), Gaps = 17/224 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++K+
Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIKKNRKKGSNRKME 60
Query: 52 -------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSV 103
+A I I++ +I++ P L+ K ++EK +K N N +++++
Sbjct: 61 SDSSSEVIAHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEVNSVNQRLNIAI 120
Query: 104 NEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELS 163
+V +P ++A+ IA QL+ RV FR+AMK+A++ + G+K+ +GRL G E++
Sbjct: 121 EKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKVDIKGIKIQIAGRLAGKEIA 180
Query: 164 RTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
R EC +GR+PLQT+RA IDY T YG G+K+++ + +E
Sbjct: 181 RAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLGVKIWIFVEEE 224
>gi|228017411|gb|ACP52228.1| ribosomal protein S3 [Larix occidentalis]
Length = 217
Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats.
Identities = 84/214 (39%), Positives = 125/214 (58%), Gaps = 12/214 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL--------KQAGV 52
M QKINP+ FRLGV S WFA+ Y L ED KIR ++ ++ G+
Sbjct: 1 MAQKINPLGFRLGVTQNDRSHWFAQQRNYSKDLREDQKIRTCIENYVRTHIKSSSNYGGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLI-IGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPK 108
A++ I R +I +Y P L+ I +G IEK+R + NM N ++H+++ +V K
Sbjct: 61 ARVEIRRKIDLIQIKIYIGFPNLLLIEGRGQGIEKLRNDVLNMLNSVDRKLHIAIEKVAK 120
Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168
P ++A+ IA QLE RV FR+ MK+A++ A R +G+++ +GRL+G E++R E
Sbjct: 121 PYRKPNILAEYIALQLENRVPFRKTMKKAIELAEREDVEGIQIQIAGRLDGKEIARVEWD 180
Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202
GRVPLQT+RA IDY +T YG GIK+++
Sbjct: 181 RGGRVPLQTIRARIDYCYYPVQTIYGVLGIKIWI 214
>gi|219684260|ref|ZP_03539204.1| ribosomal protein S3 [Borrelia garinii PBr]
gi|219672249|gb|EED29302.1| ribosomal protein S3 [Borrelia garinii PBr]
Length = 292
Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats.
Identities = 81/214 (37%), Positives = 131/214 (61%), Gaps = 3/214 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK++P R+ +N W S+W+ Y +LHED IR + LK IE
Sbjct: 1 MGQKVHPYSLRVKINKDWKSKWYFDKKLYSTILHEDFLIRLEIMKFLKGIKFDISDIEII 60
Query: 60 --THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117
+ +++ + RPG +IG KG+++EKI + L+ + +I + + EV +PE++A +IA
Sbjct: 61 RNNPQKVTVVIVTPRPGSVIGLKGSNLEKIGQLLTKKISKKISIKIKEVKRPELDAQIIA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
IA+Q+E RV +R+ +K ++ ++M GA G+K+ +GRL GAE++R+ EGRVPL T
Sbjct: 121 NGIAKQVENRVSYRKVLKSSLSTSMLKGAQGLKIKIAGRLGGAEIARSFEVKEGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
LRA+IDYG + A+T YG G+KV++ + +
Sbjct: 181 LRANIDYGFSEAQTTYGIIGVKVWLFKGEVLGRQ 214
>gi|222084124|ref|YP_002519576.1| ribosomal protein S3 [Keteleeria davidiana]
gi|220983676|dbj|BAH11442.1| ribosomal protein S3 [Keteleeria davidiana]
Length = 217
Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats.
Identities = 82/214 (38%), Positives = 125/214 (58%), Gaps = 12/214 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL--------KQAGV 52
M QKINP+ FRLGV S WFA+ Y L ED KIR ++ ++ G+
Sbjct: 1 MAQKINPLGFRLGVTQNDRSHWFAQQRNYSKDLREDQKIRTCIENYVRTHMKSSSNYGGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLI-IGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPK 108
A++ I R ++ +Y P L+ I +G IEK+R + NM + ++H+++ +V K
Sbjct: 61 ARVEISRKIDLIQVKIYIGFPNLLLIEGRGQGIEKLRNDVLNMLDSVDRKLHIAIEKVAK 120
Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168
P ++A+ IA QLE RV FR+ MK+A++ A R +G+++ +GRL+G E++R E
Sbjct: 121 PYRKPNILAEYIALQLENRVPFRKTMKKAIELAEREDVEGIQIQIAGRLDGKEIARVEWD 180
Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202
GRVPLQT+RA IDY +T YG GIK+++
Sbjct: 181 RGGRVPLQTIRARIDYCYYPVQTIYGVLGIKIWI 214
>gi|313183892|ref|YP_004021746.1| ribosomal protein S3 [Equisetum arvense]
gi|281371612|gb|ADA63545.1| ribosomal protein S3 [Equisetum arvense]
Length = 218
Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats.
Identities = 82/216 (37%), Positives = 130/216 (60%), Gaps = 11/216 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ--------AGV 52
MGQKI+P+ FRLGVN S WF Y ++ ED KIR +Q +++ G+
Sbjct: 1 MGQKIHPLGFRLGVNQNHRSIWFIGTDFYSHVIKEDRKIRNCIQKFVRKNIKNTSNYGGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN---MTNSEIHLSVNEVPKP 109
A+I I+R I +++ P L++ ++G+ +E+++ + +++H+S+ E+ KP
Sbjct: 61 ARIEIKRKTDLINITIHTGFPDLLMEERGSGMEQLKSTIQKELIYKRNKLHISLIELEKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
++A+ IA QLE RV FRR MK+A++ + +G+K+ SGRLNG E++R+E
Sbjct: 121 YREPKILAEHIASQLENRVAFRRTMKKAIELFEKTNNNGIKIQISGRLNGNEIARSEWVR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
EGR+PLQTLRA I+Y A+T YG GIKV++
Sbjct: 181 EGRIPLQTLRASINYSYYPAQTIYGVLGIKVWIFQN 216
>gi|124494176|gb|ABN13133.1| ribosomal protein S3 [Picris echioides phyllody phytoplasma]
Length = 248
Score = 205 bits (523), Expect = 3e-51, Method: Composition-based stats.
Identities = 78/215 (36%), Positives = 121/215 (56%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ W S+W+ + L+HED KIR ++ + ++ I I+R
Sbjct: 1 MGQKSNPNGLRLGIIQNWKSQWYVEDKQVPNLVHEDFKIRNLIKKFYMRGIISDIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +++++ GLI G K+ +K+ + N ++ ++V EV + A+L+
Sbjct: 61 KKSNNEEITINLFTSKIGLIQGVDNKTKNKLLQKIEKIINKKVLINVFEVKTLDKIASLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R FR K + Q ++ GA GVK+I SGRL GAE++R E G VPL
Sbjct: 121 AQNIAIQLQQRSYFRAVQKISAQKVLKSGAKGVKIILSGRLGGAEIARRETISLGLVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
T RA IDY A T YG G++V++ + +
Sbjct: 181 TFRADIDYALEEAHTTYGVLGVQVWIFHGEVFPNK 215
>gi|224179521|ref|YP_002601055.1| ribosomal protein S3 [Monomastix sp. OKE-1]
gi|217314564|gb|ACK36907.1| ribosomal protein S3 [Monomastix sp. OKE-1]
Length = 235
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 85/229 (37%), Positives = 132/229 (57%), Gaps = 24/229 (10%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFA-----RGS----EYGALLHEDLKIREYLQCHLKQAG 51
MGQKI+P+ R+G+ S WFA + Y A + +D +R++ L+ AG
Sbjct: 1 MGQKIHPLGLRIGIFQKHKSEWFAPVGSSNSNQSIPNYAAFIEQDKGVRDFFSSELRDAG 60
Query: 52 VAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNE------ 105
++KILI R + ++ A+P L++G+ G +++++ +K + N
Sbjct: 61 LSKILISRRTNRLFVELHVAQPKLVLGENGNNLKQLTEKFQKNIQKLLSRHNNPSMSAPA 120
Query: 106 -----VPKPE----INATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156
V P+ +ATL+ Q IA+QLE+RV FRR MK+++Q A GA+G+K+ +GR
Sbjct: 121 LSIQVVQIPQEEIATDATLLGQKIAEQLEKRVAFRRVMKQSIQQARAAGAEGIKIQIAGR 180
Query: 157 LNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
LNGAE++RTE EGRVPLQTL+A+IDY A+T YG GIK+++
Sbjct: 181 LNGAEIARTEWAREGRVPLQTLKANIDYCYETAQTIYGILGIKIWIFKG 229
>gi|307697311|gb|ADN86110.1| ribosomal protein S3 [Chasmanthium latifolium]
Length = 224
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 76/224 (33%), Positives = 124/224 (55%), Gaps = 17/224 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDQKIRNCIKNYIQKNRKKGSNRKIE 60
Query: 52 -------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSV 103
+ I I++ +I++ P L+ K ++EK +K N N +++++
Sbjct: 61 SDPSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEVNSVNQRLNIAI 120
Query: 104 NEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELS 163
+V +P ++A+ IA QL+ RV FR+AMK+A++ + GVK+ +GRL G E++
Sbjct: 121 EKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLAGKEIA 180
Query: 164 RTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
R EC +GR+PLQT+RA IDY T YG G+K+++ + +E
Sbjct: 181 RAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLGVKIWIFVEEE 224
>gi|312149741|gb|ADQ29812.1| ribosomal protein S3 [Borrelia burgdorferi N40]
Length = 293
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 81/214 (37%), Positives = 131/214 (61%), Gaps = 3/214 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK++P R+ +N W S+W+ Y A+LHED IR + LK IE
Sbjct: 1 MGQKVHPYSLRVKINKDWKSKWYFDKKLYSAILHEDFLIRREIMKFLKGIKFDISDIEII 60
Query: 60 --THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117
+ +++ + RPG +IG KG+++EKI + L+ + +I + + EV +PE++A +IA
Sbjct: 61 RNNPQKVTVVIVTPRPGSVIGLKGSNLEKIGQLLTKKISKKISIKIKEVKRPELDAQIIA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
IA+Q+E R +R+ +K ++ ++M GA G+K+ +GRL GAE++R+ EGRVPL T
Sbjct: 121 NGIAKQVENRASYRKVLKSSLSTSMLKGAQGLKIKIAGRLGGAEIARSFEVKEGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
LRA+IDYG + A+T YG G+KV++ + +
Sbjct: 181 LRANIDYGFSEAQTTYGIVGVKVWLFKGEVLGRQ 214
>gi|225544161|ref|YP_002720150.1| rps3 [Jatropha curcas]
gi|224979602|gb|ACN72729.1| rps3 [Jatropha curcas]
Length = 221
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 75/217 (34%), Positives = 123/217 (56%), Gaps = 13/217 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + +S WFA+ Y L ED KIR ++ ++KQ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHHSLWFAQPKNYSEDLQEDQKIRNCIKNYVKQNTKISSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS-----EIHLSVNEVP 107
A+I I++ ++++Y L++ + IE+++ + N I + + +
Sbjct: 61 ARIEIQKRIDVIQVMIYMGFQKLLMEGRPKQIEELQMNVQKELNYVNRKLNIAIKIKRIS 120
Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTEC 167
P ++A+ IA QL+ RV FR+AMK+A++ + G++V +GRL+G E++R E
Sbjct: 121 NPYGQPNILAEFIAGQLKNRVSFRKAMKKAIELTEQTDTKGIQVQIAGRLDGKEIARVEW 180
Query: 168 YLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
EGRVPLQT++A I+Y + +T YG GIK++ L
Sbjct: 181 IREGRVPLQTIQAKIEYCSYTVKTIYGVLGIKIWTFL 217
>gi|18860350|ref|NP_569667.1| ribosomal protein S3 [Psilotum nudum]
gi|27734483|sp|Q8WHY4|RR3_PSINU RecName: Full=30S ribosomal protein S3, chloroplastic
gi|18389503|dbj|BAB84255.1| ribosomal protein S3 [Psilotum nudum]
Length = 220
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 82/220 (37%), Positives = 124/220 (56%), Gaps = 13/220 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR-GSEYGALLHEDLKIREYLQCH--------LKQAG 51
MGQKI+P+ FRLG S WFA+ Y L+ ED +IR ++ + G
Sbjct: 1 MGQKIHPLGFRLGTTQNHCSYWFAQSKKIYSKLVKEDKEIRNCIEKYVQKHTNNPFHYGG 60
Query: 52 VAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPK 108
+A+I I R R+ ++ L+ G E+++ + + N ++ L + ++ K
Sbjct: 61 IARIEIYRKTDLIRVEIHMGFTDLLTENGGIRFEQLKSNIEKIVNSKNQKLCLILIKIDK 120
Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG-VKVIASGRLNGAELSRTEC 167
P ++A+ IA QLE RVVFR+A+K+A++ A F G +K+ +GRLNG E++R E
Sbjct: 121 PYTEPKVLAEYIALQLENRVVFRKAVKKALELAGNFKNKGGIKIQIAGRLNGIEIARVEW 180
Query: 168 YLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RAHI+Y A+T YG GIKV++ DE
Sbjct: 181 TREGRVPLQTIRAHINYYYYPAKTIYGILGIKVWIYQNDE 220
>gi|309322301|ref|YP_003934152.1| ribosomal protein S3 [Cedrus deodara]
gi|228016590|gb|ACP51420.1| ribosomal protein S3 [Abies firma]
gi|228017097|gb|ACP51919.1| ribosomal protein S3 [Cedrus deodara]
gi|307683227|dbj|BAJ19535.1| ribosomal protein S3 [Cedrus deodara]
Length = 217
Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 82/214 (38%), Positives = 125/214 (58%), Gaps = 12/214 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL--------KQAGV 52
M QKINP+ FRLGV S WFA+ Y L ED KIR ++ ++ G+
Sbjct: 1 MAQKINPLGFRLGVTQNDRSHWFAQQRNYSKDLREDQKIRTCIENYVRTHIKSSSNYGGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLI-IGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPK 108
A++ I R ++ +Y P L+ I +G IEK+R + NM + ++H+++ +V K
Sbjct: 61 ARVEIRRKIDLIQVKIYIGFPNLLLIEGRGQGIEKLRNDVLNMLDSVDRKLHIAIEKVAK 120
Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168
P ++A+ IA QLE RV FR+ MK+A++ A R +G+++ +GRL+G E++R E
Sbjct: 121 PYRKPNILAEYIALQLENRVPFRKTMKKAIELAEREDVEGIQIQIAGRLDGKEIARVEWD 180
Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202
GRVPLQT+RA IDY +T YG GIK+++
Sbjct: 181 RGGRVPLQTIRARIDYCYYPVQTIYGVLGIKIWI 214
>gi|167967949|ref|ZP_02550226.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis H37Ra]
Length = 205
Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 87/179 (48%), Positives = 124/179 (69%), Gaps = 2/179 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG+ W SRW+A +Y + ED+ IR L L++AG+A + IERT
Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYAEYVKEDVAIRRLLSSGLERAGIADVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+ +++ARPG++IG++GT+ ++IR L +T ++ L++ EV PE A L+AQ +
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTGKQVQLNILEVKNPESQAQLVAQGV 119
Query: 121 AQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
A+QL RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL +L
Sbjct: 120 AEQLSNRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHSL 178
>gi|124494173|gb|ABN13131.1| ribosomal protein S3 [Knautia arvensis phyllody phytoplasma]
Length = 248
Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats.
Identities = 78/215 (36%), Positives = 124/215 (57%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ W S+W+ + L+HED KIR ++ + ++ I I+R
Sbjct: 1 MGQKSNPNGLRLGIIQNWKSQWYVEDKQVPNLVHEDFKIRNLIKKFYIRGIISDIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +++++ GLI G +K+ +K+ + N ++ ++V EV + A+L+
Sbjct: 61 KKSNNEEITINLFTSKIGLIQGIDNKTKDKLLQKIEKIINKKVLINVFEVKALDKIASLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R FR K + Q ++ GA G+K+I SGRL GAE++R+E G VPL
Sbjct: 121 AQNIAIQLQQRNYFRAVQKISAQKVLKSGAKGIKIILSGRLGGAEIARSETISLGLVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
T RA IDY A T YG G+KV++ + + +
Sbjct: 181 TFRADIDYALEEAYTTYGVLGVKVWIFHGEVLPNK 215
>gi|124494188|gb|ABN13141.1| ribosomal protein S3 [Spirea stunt phytoplasma]
Length = 277
Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats.
Identities = 78/214 (36%), Positives = 122/214 (57%), Gaps = 3/214 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +P RLG+ W+S+W A + L+ ED +IR + H +A ++++
Sbjct: 1 MGQKSSPTGLRLGIIRNWDSKWHAEDKQVPNLILEDYQIRNLINNHYPKATISRMKFXVL 60
Query: 61 HKNCR---IIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117
N I +Y+++ G++ G + + K+ +K+ + +I L+V E+ P+ A L+A
Sbjct: 61 KINXEQIPIFLYTSKLGIVGGPEXKEKNKLVEKIKKLIKKDIILNVLEIKNPDKVAILVA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
Q++A QLE+R FR A K VQ ++ G GVK+I SGRL GAE++R E +G VPL T
Sbjct: 121 QNLAIQLEQRAFFRAAQKMTVQKVLKTGVKGVKIIISGRLGGAEIARQETLSKGLVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
LRA IDY A T YG G+KV++ + +
Sbjct: 181 LRADIDYAFEEAHTTYGVLGVKVWIYHGEVLPKQ 214
>gi|26554457|ref|NP_758391.1| ribosomal protein S3 [Mycoplasma penetrans HF-2]
gi|81747361|sp|Q8EUC1|RS3_MYCPE RecName: Full=30S ribosomal protein S3
gi|26454467|dbj|BAC44795.1| ribosomal protein S3 [Mycoplasma penetrans HF-2]
Length = 417
Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats.
Identities = 85/229 (37%), Positives = 137/229 (59%), Gaps = 3/229 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARG-SEYGALLHEDLKIREYLQCHLKQAGVAKILIER 59
MGQK+NP RLG+N W SRW A+ + L +D KIR+++ K A V+ + IER
Sbjct: 1 MGQKVNPNGLRLGINRNWESRWVAKDNRQTALWLVQDDKIRKHIFKVCKAAQVSHVEIER 60
Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE--IHLSVNEVPKPEINATLIA 117
T I ++ ++PG+++GK+ ++++ ++++LS + + ++++V + KP +A +IA
Sbjct: 61 TQNKVDIFIHCSQPGIVLGKEMSNLKVLKQQLSYIVGRKTKVNVNVLPLDKPTFSARIIA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ IA +E R FR A K A++ + GA G+K SGRL G E++R E Y EG VPL T
Sbjct: 121 REIADAIENRFSFRNAQKIAIKKVLASGAKGIKTNVSGRLGGVEMAREEGYSEGIVPLTT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
LRA+IDY A T YG G+KV+++ + + S E + +EK
Sbjct: 181 LRANIDYALEEAWTTYGLIGVKVWINRGELFKKNFSQNTKFEKKPIEKK 229
>gi|307683591|dbj|BAJ19774.1| ribosomal protein S3 [Larix decidua]
Length = 217
Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats.
Identities = 83/214 (38%), Positives = 124/214 (57%), Gaps = 12/214 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL--------KQAGV 52
M QKINP+ FRLGV S WFA+ Y L ED KIR ++ ++ G+
Sbjct: 1 MAQKINPLGFRLGVTQNDRSHWFAQQRNYSKDLREDQKIRTCIENYVRTHIKSSSNYGGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLI-IGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPK 108
A++ I R +I +Y P L+ I +G IEK+R + NM N ++H+++ +V K
Sbjct: 61 ARVEIRRKIDLIQIKIYIGFPNLLLIEGRGQGIEKLRNDVLNMLNSVDRKLHIAIEKVAK 120
Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168
P ++A+ IA QLE RV FR+ MK+A++ A R +G+++ +GRL+G E++R E
Sbjct: 121 PYRKPNILAEYIALQLENRVPFRKTMKKAIELAEREDVEGIQIQIAGRLDGKEIARVEWD 180
Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202
RVPLQT+RA IDY +T YG GIK+++
Sbjct: 181 RGDRVPLQTIRARIDYCYYPVQTIYGVLGIKIWI 214
>gi|108796884|ref|YP_636182.1| ribosomal protein S3 [Pseudendoclonium akinetum]
gi|91207774|sp|Q3ZJ85|RR3_PSEAK RecName: Full=30S ribosomal protein S3, chloroplastic
gi|56159582|gb|AAV80606.1| ribosomal protein S3 [Pseudendoclonium akinetum]
Length = 229
Score = 204 bits (520), Expect = 6e-51, Method: Composition-based stats.
Identities = 83/227 (36%), Positives = 130/227 (57%), Gaps = 21/227 (9%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQKI+P+ FRLG+ S+W+A+ S+Y L+ ED K+R+ L +A + I+I+R
Sbjct: 1 MGQKIHPLGFRLGITQEHRSKWYAKASDYPRLVLEDKKLRDNLFKQYPKANIVDIIIKRR 60
Query: 60 ----------THKNCRIIVYSARPGLIIGKKGTDI----------EKIRKKLSNMTNSEI 99
+ + +Y+A PG IIG+ I ++ + N+ I
Sbjct: 61 QTTQDLETKESVDVIEVSIYTAVPGKIIGRSKATITELKESLEKLCQLDRMKHNLPQIRI 120
Query: 100 HLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNG 159
L++ +V P +A++IA + +QLE+R+ FR A+K+A++ +G+K+ SGRLNG
Sbjct: 121 ILTILKVQNPYSSASVIADYLIEQLEQRIPFRAALKKALERIRLAKLEGIKIEISGRLNG 180
Query: 160 AELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
AE++R+E +GRVPLQTLRA IDY A+T YG GIKV+ +
Sbjct: 181 AEIARSEWVRKGRVPLQTLRADIDYSAKTAKTIYGILGIKVWAFKGE 227
>gi|133929|sp|P16631|RR3_GRATE RecName: Full=30S ribosomal protein S3, chloroplastic
gi|552546|gb|AAA84292.1| ribosomal protein rps3 [Gracilaria tenuistipitata]
Length = 209
Score = 204 bits (519), Expect = 8e-51, Method: Composition-based stats.
Identities = 86/201 (42%), Positives = 127/201 (63%), Gaps = 2/201 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +P+ FR+G+ S WF+ Y L ED KIR ++ L A ++ I I+R
Sbjct: 1 MGQKTHPLGFRIGITRDHKSSWFSNIKSYPKLAQEDYKIRSCIEKQLHNASISLIYIDRK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATLIAQ 118
++ +++ARPG+I+GK G +E +RKKL + +I +++ E+ P+ ATLIA+
Sbjct: 61 VAQVQVHIHTARPGIILGKLGRGLEDLRKKLETTLKNDTQIRINLIEITDPDKEATLIAE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
I Q+LE+R+ FRR +++A+Q A + G+K+ SGRLNG+E++R E EGRVPLQTL
Sbjct: 121 FIVQRLEKRIAFRRVIRQAMQRAQKAKNQGIKIQVSGRLNGSEIARIESVREGRVPLQTL 180
Query: 179 RAHIDYGTAVAETAYGSCGIK 199
RAHIDY T YG G+K
Sbjct: 181 RAHIDYSYKTTHTIYGILGVK 201
>gi|262341019|ref|YP_003283874.1| 30S ribosomal protein S3 [Blattabacterium sp. (Blattella germanica)
str. Bge]
gi|262272356|gb|ACY40264.1| 30S ribosomal protein S3 [Blattabacterium sp. (Blattella germanica)
str. Bge]
Length = 231
Score = 204 bits (519), Expect = 8e-51, Method: Composition-based stats.
Identities = 92/227 (40%), Positives = 146/227 (64%), Gaps = 4/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NPI+ RLG+ W S W + Y + ED K+R Y++ L + V++I IERT
Sbjct: 1 MGQKTNPIVNRLGIITGWQSSWC---NNYKDRIQEDFKVRRYIEARLPKGIVSRIFIERT 57
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K I + ++RP L+IGK G +++ +RK+L +T E+ ++++EV +PE++A L+A+ I
Sbjct: 58 LKFITITIRTSRPALVIGKGGDEVDTVRKELKKLTKKEVQINISEVKRPELDAPLVAKGI 117
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
+QLE R+ +++A+K ++ SAMR A G+++ SGRLNG+E++R E Y EGR+ L T RA
Sbjct: 118 VRQLENRISYKKAIKLSILSAMRMNAQGIRIQISGRLNGSEMARCETYKEGRISLGTFRA 177
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
+DY +VA T YGS GIKV++ + EV P + ++ +
Sbjct: 178 DVDYHMSVANTVYGSIGIKVWIM-KGEVYGKRELSPFLGMQKKQRGN 223
>gi|323148867|ref|YP_004221959.1| ribosomal protein S3 [Erodium carvifolium]
gi|316926331|gb|ADU58184.1| ribosomal protein S3 [Erodium carvifolium]
Length = 223
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 70/222 (31%), Positives = 120/222 (54%), Gaps = 15/222 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG-------VA 53
MGQKINP+ FRLG +S WF +Y L ED KIR+ ++ ++ ++
Sbjct: 1 MGQKINPLGFRLGTTQNHHSIWFEEPKKYCEGLQEDQKIRDRIKNYIDNHRASPLTDLIS 60
Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN--------MTNSEIHLSVNE 105
+I IE++ ++I+Y P +I K +I+ + K N ++ + + +
Sbjct: 61 RIQIEKSIDLVQVIIYLGFPEFLIEVKPPEIKAAKMKELKGNVEKVRHSGNRDLKIVIRK 120
Query: 106 VPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRT 165
+ P + ++A +A QL+ RV FR+AMK+ ++ A + A G++V +GR++G E++R
Sbjct: 121 IGNPYRDPQILAAFLADQLKNRVPFRKAMKKTIELAEKAYAKGIQVQIAGRIDGKEIARV 180
Query: 166 ECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
E +GRV LQT+R ID+ + T +G GIK++V E
Sbjct: 181 EWLRKGRVSLQTIRTQIDFCSTTVGTIHGVLGIKIWVFANRE 222
>gi|29565652|ref|NP_817232.1| ribosomal protein S3 [Pinus koraiensis]
gi|324986391|ref|YP_004276263.1| ribosomal protein S3 [Pinus lambertiana]
gi|34924924|sp|Q85WZ0|RR3_PINKO RecName: Full=30S ribosomal protein S3, chloroplastic
gi|29469751|gb|AAO74079.1| ribosomal protein S3 [Pinus koraiensis]
gi|228016147|gb|ACP50984.1| ribosomal protein S3 [Pinus sibirica]
gi|228016274|gb|ACP51109.1| ribosomal protein S3 [Pinus strobus]
gi|228016653|gb|ACP51482.1| ribosomal protein S3 [Pinus albicaulis]
gi|228016785|gb|ACP51612.1| ribosomal protein S3 [Pinus armandii]
gi|228016910|gb|ACP51735.1| ribosomal protein S3 [Pinus ayacahuite]
gi|228017155|gb|ACP51976.1| ribosomal protein S3 [Pinus cembra]
gi|228017278|gb|ACP52097.1| ribosomal protein S3 [Pinus flexilis]
gi|228017343|gb|ACP52161.1| ribosomal protein S3 [Pinus lambertiana]
gi|228017537|gb|ACP52352.1| ribosomal protein S3 [Pinus monticola]
gi|228017599|gb|ACP52413.1| ribosomal protein S3 [Pinus parviflora var. pentaphylla]
gi|228017663|gb|ACP52476.1| ribosomal protein S3 [Pinus peuce]
gi|323514240|gb|ADX89787.1| ribosomal protein S3 [Pinus lambertiana]
Length = 217
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 82/214 (38%), Positives = 126/214 (58%), Gaps = 12/214 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL--------KQAGV 52
M QKINP+ FRLGV S WFA+ Y L ED KIR ++ ++ G+
Sbjct: 1 MAQKINPLGFRLGVTQNDRSHWFAQQRNYSKDLREDQKIRTCIENYVRTHIKSSSNYGGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLI-IGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPK 108
A++ I R ++ +Y P L+ I +G IEK+R + NM + ++H+++ +V K
Sbjct: 61 ARVEIRRKIDLIQVKIYIGFPNLLLIEGRGQGIEKLRNDVLNMLDSADRKLHIAIEKVAK 120
Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168
P ++A+ IA QLE+RV FR+ MK+A++ A R +G+++ +GRL+G E++R E
Sbjct: 121 PYRKPNILAEYIALQLEKRVPFRKTMKKAIELAEREEVEGIQIQIAGRLDGKEIARVEWD 180
Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202
GRVPLQT+RA IDY +T YG GIK+++
Sbjct: 181 RGGRVPLQTIRARIDYCYYPVQTIYGVLGIKIWI 214
>gi|237688624|ref|YP_002905241.1| ribosomal protein S3 [Pinus gerardiana]
gi|237688692|ref|YP_002905308.1| ribosomal protein S3 [Pinus krempfii]
gi|324986462|ref|YP_004276333.1| ribosomal protein S3 [Pinus monophylla]
gi|324986534|ref|YP_004276404.1| ribosomal protein S3 [Pinus nelsonii]
gi|226876084|gb|ACO89340.1| ribosomal protein S3 [Pinus gerardiana]
gi|226951149|gb|ACO94212.1| ribosomal protein S3 [Pinus krempfii]
gi|228016213|gb|ACP51049.1| ribosomal protein S3 [Pinus squamata]
gi|228016722|gb|ACP51550.1| ribosomal protein S3 [Pinus aristata]
gi|323522557|gb|ADX94899.1| ribosomal protein S3 [Pinus monophylla]
gi|323522722|gb|ADX94970.1| ribosomal protein S3 [Pinus nelsonii]
Length = 217
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 82/214 (38%), Positives = 126/214 (58%), Gaps = 12/214 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL--------KQAGV 52
M QKINP+ FRLGV S WFA+ Y L ED KIR ++ ++ G+
Sbjct: 1 MAQKINPLGFRLGVTQNDRSHWFAQQRNYSKDLREDQKIRTCIENYVRTHIKSSSNYGGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLI-IGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPK 108
A++ I R ++ +Y P L+ I +G IEK+R + NM + ++H+++ +V K
Sbjct: 61 ARVEIRRKIDLIQVKIYIGFPNLLLIEGRGQGIEKLRNDVLNMLDSVDRKLHIAIEKVAK 120
Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168
P ++A+ IA QLE+RV FR+ MK+A++ A R +G+++ +GRL+G E++R E
Sbjct: 121 PYRKPNILAEYIALQLEKRVPFRKTMKKAIELAEREEVEGIQIQIAGRLDGKEIARVEWD 180
Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202
GRVPLQT+RA IDY +T YG GIK+++
Sbjct: 181 RGGRVPLQTIRARIDYCYYPVQTIYGVLGIKIWI 214
>gi|148377803|ref|YP_001256679.1| 30S ribosomal protein S3 [Mycoplasma agalactiae PG2]
gi|226697733|sp|A5IYY0|RS3_MYCAP RecName: Full=30S ribosomal protein S3
gi|148291849|emb|CAL59239.1| 30S ribosomal protein S3 [Mycoplasma agalactiae PG2]
Length = 216
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 79/216 (36%), Positives = 124/216 (57%), Gaps = 4/216 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FR G+ NS WFA YG LL +D KI ++ +++ + I+RT
Sbjct: 1 MGQKVNPNGFRYGITKPINSVWFAEKQNYGDLLVQDAKIYKFFDKLVRKYQIGNTSIKRT 60
Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEV---PKPEINATLI 116
+ +++ +++P ++G+ G +IEKI + L ++ +V +PE+NA L
Sbjct: 61 KAQKVTVVLQTSQPAKLLGENGANIEKITQDLHKYLKNKSLDINLQVSLLKQPELNARLA 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
A++IAQ+LE R FR A K + A+R GA G+K SGRLNG +++R E Y G + L
Sbjct: 121 AEAIAQKLENRESFRVAQKLVINDALRAGAKGIKTQVSGRLNGVDMARAEGYSSGEMRLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
TLR +D+ A A T YG+ G+KV++S + +
Sbjct: 181 TLRQDVDFAKATARTIYGAIGVKVWISKGELLEGDK 216
>gi|254553689|gb|ACT67303.1| ribosomal protein S3 [Joinvillea plicata]
Length = 224
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 73/224 (32%), Positives = 124/224 (55%), Gaps = 17/224 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNKKIASNRKIA 60
Query: 52 -------VAKILIERTHKNCRIIVYSARPGLIIGKK-GTDIEKIRKKLSNMTNSEIHLSV 103
+A I I++ +I++ P L+ K+ +++ +K N N +++++
Sbjct: 61 SDSSSEVIAHIEIQKQIDVIHVIIHVGFPNLLKQKRVIKELQMNVQKEINSVNQRLNIAI 120
Query: 104 NEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELS 163
+V +P ++A+ IA QL++RV FR+AMK+A+ + GV+V +GRL G E++
Sbjct: 121 AKVQEPYRQPNILAEYIASQLKKRVSFRKAMKKAIDLTKKTDTKGVQVQIAGRLGGKEIA 180
Query: 164 RTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
R E +GR+PLQT+RA ID+ T YG G+K+++ + +E
Sbjct: 181 RAEWIRKGRLPLQTIRAKIDHCCYPIRTIYGVLGLKIWIFVEEE 224
>gi|304373184|ref|YP_003856393.1| 30S ribosomal protein S3 [Mycoplasma hyorhinis HUB-1]
gi|304309375|gb|ADM21855.1| 30S ribosomal protein S3 [Mycoplasma hyorhinis HUB-1]
Length = 243
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 79/224 (35%), Positives = 131/224 (58%), Gaps = 4/224 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FR GV N+ W+A ++ L ED+KI + + ++ + I R
Sbjct: 1 MGQKVNPNGFRYGVTKEHNAIWYADKKDFAPNLLEDVKIHRFFEKLTREYLIGNTKIRRD 60
Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE---IHLSVNEVPKPEINATLI 116
N ++VY+A+ G +G+ G++++KI + + ++ +++ E+ KP+++A L+
Sbjct: 61 QDNKVTVVVYTAKLGTFLGQSGSNLKKIIEDVKKYVKNKKLVLNIDAVEIEKPDLDAKLL 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
A+SIA +LE R +R A K A++ A + GA G+K SGRLNG +++R+E Y EG + L
Sbjct: 121 AESIAIKLENRGSYRMAQKFAIRLAQKAGAKGIKTKVSGRLNGVDMARSEGYSEGEMKLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
TLR + Y TA A T YG+ G+KV+VSL + + + E
Sbjct: 181 TLRQDVSYATATARTTYGALGVKVWVSLGEVFAKQNQAYNEEEP 224
>gi|291320500|ref|YP_003515764.1| 30S ribosomal protein S3 [Mycoplasma agalactiae]
gi|290752835|emb|CBH40810.1| 30S ribosomal protein S3 [Mycoplasma agalactiae]
Length = 216
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 79/216 (36%), Positives = 124/216 (57%), Gaps = 4/216 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FR G+ NS WFA YG LL +D KI ++ +++ + I+RT
Sbjct: 1 MGQKVNPNGFRYGITKPINSVWFAEKQNYGDLLVQDAKIYKFFDKLVRKYQIGNTSIKRT 60
Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEV---PKPEINATLI 116
+ +++ +++P ++G+ G +IEKI + L ++ +V +PE+NA L
Sbjct: 61 KAQKVTVVLQTSQPAKLLGENGANIEKITQDLHKYLKNKSLDINLQVSLLKQPELNARLA 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
A++IAQ+LE R FR A K + A+R GA G+K SGRLNG +++R E Y G + L
Sbjct: 121 AEAIAQKLENRESFRVAQKLVINDALRAGAKGIKTQVSGRLNGVDMARAEGYSRGEMRLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
TLR +D+ A A T YG+ G+KV++S + +
Sbjct: 181 TLRQDVDFAKATARTIYGAIGVKVWISKGELLEGDK 216
>gi|228016092|gb|ACP50930.1| ribosomal protein S3 [Pinus rzedowskii]
Length = 217
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 82/214 (38%), Positives = 126/214 (58%), Gaps = 12/214 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL--------KQAGV 52
M QKINP+ FRLGV S WFA+ Y L ED KIR ++ ++ G+
Sbjct: 1 MAQKINPLGFRLGVTQNDRSHWFAQQRNYSKDLREDQKIRTCIENYVRTHIKSSSNYGGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLI-IGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPK 108
A++ I R ++ +Y P L+ I +G IEK+R + NM + ++H+++ +V K
Sbjct: 61 ARVEIRRKIDLIQVKIYIGFPNLLLIEGRGQGIEKLRNDVLNMLDSVDRKLHIAIEKVAK 120
Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168
P ++A+ IA QLE+RV FR+ MK+A++ A R +G+++ +GRL+G E++R E
Sbjct: 121 PYRKPNILAEYIALQLEKRVPFRKTMKKAIELAEREEVEGIQIQIAGRLDGKEIARVEWD 180
Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202
GRVPLQT+RA IDY +T YG GIK+++
Sbjct: 181 RGGRVPLQTIRARIDYCYYPVKTIYGVLGIKIWI 214
>gi|124494167|gb|ABN13127.1| ribosomal protein S3 [Rhynchosia little leaf phytoplasma]
Length = 235
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 79/215 (36%), Positives = 123/215 (57%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ W S+W+ + L+HED KIR ++ + ++ I I+R
Sbjct: 1 MGQKSNPNGLRLGIIQNWKSQWYIEDKQVPNLVHEDFKIRILIKQFYIKGVISDIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +++++ GLI G K+ +K+ + N ++ ++V EV + A+L+
Sbjct: 61 KKSNNEEITINLFTSKIGLIQGIDNKTKNKLLQKIEKIINKKVLINVFEVKALDKIASLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+I QL++R FR K + Q ++ GA GVK+I SGRL GAE++R+E G VPL
Sbjct: 121 AQNIVIQLQQRSYFRAVQKISAQKVLKSGAKGVKIILSGRLGGAEIARSETISLGLVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
T RA IDY A T YG G+KV++ + +S+
Sbjct: 181 TFRADIDYAFEEAHTTYGVLGVKVWIFHGEVLSNK 215
>gi|148284208|ref|YP_001248298.1| 30S ribosomal protein S3 [Orientia tsutsugamushi str. Boryong]
gi|172047210|sp|A5CCK6|RS3_ORITB RecName: Full=30S ribosomal protein S3
gi|146739647|emb|CAM79436.1| 30S ribosomal protein S3 [Orientia tsutsugamushi str. Boryong]
Length = 218
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 95/210 (45%), Positives = 139/210 (66%), Gaps = 4/210 (1%)
Query: 1 MGQKINPILFRLGVN--CTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILI- 57
MGQK+NP +FR G N W S +A + Y L + LKIR+ + A + KILI
Sbjct: 1 MGQKVNPCIFRTGPNLPRNWESVLYA-KNNYSDFLLKILKIRKIINTEYSFAQITKILIE 59
Query: 58 ERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117
+ KN + +Y+ + G+IIGK G DIEK+++ ++ +T++++ +++ EV KPE+ IA
Sbjct: 60 WPSSKNIVVNIYAKKIGVIIGKSGGDIEKLKQNIAKITSADVSINIREVKKPELEEAFIA 119
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
Q+IAQQLERR F++ MK+A+ ++M+ GA G+K+I SGRL G E++R+E Y EGRVPLQT
Sbjct: 120 QTIAQQLERRQSFKKVMKKAIHASMKQGAKGIKIICSGRLGGVEIARSESYKEGRVPLQT 179
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
+RA I Y A A T YG G+KV+V D
Sbjct: 180 IRADIRYAFAEAITTYGVIGVKVWVYRCDV 209
>gi|330723956|gb|AEC46326.1| 30S ribosomal protein S3 [Mycoplasma hyorhinis MCLD]
Length = 243
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 79/224 (35%), Positives = 131/224 (58%), Gaps = 4/224 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FR GV N+ W+A ++ L ED+KI + + ++ + I R
Sbjct: 1 MGQKVNPNGFRYGVTKEHNAIWYADKKDFAPNLLEDVKIHRFFEKITREYLIGNTKIRRD 60
Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE---IHLSVNEVPKPEINATLI 116
N ++VY+A+ G +G+ G++++KI + + ++ +++ E+ KP+++A L+
Sbjct: 61 QDNKVTVVVYTAKLGTFLGQSGSNLKKIIEDVKKYVKNKKLVLNIDAVEIEKPDLDAKLL 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
A+SIA +LE R +R A K A++ A + GA G+K SGRLNG +++R+E Y EG + L
Sbjct: 121 AESIAIKLENRGSYRMAQKFAIRLAQKAGAKGIKTKVSGRLNGVDMARSEGYSEGEMKLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
TLR + Y TA A T YG+ G+KV+VSL + + + E
Sbjct: 181 TLRQDVSYATATARTTYGALGVKVWVSLGEVFAKQNQAYNEEEP 224
>gi|308190089|ref|YP_003923020.1| 30S ribosomal protein S3 [Mycoplasma fermentans JER]
gi|319777385|ref|YP_004137036.1| 30S ribosomal protein s3 [Mycoplasma fermentans M64]
gi|307624831|gb|ADN69136.1| 30S ribosomal protein S3 [Mycoplasma fermentans JER]
gi|318038460|gb|ADV34659.1| 30S ribosomal protein S3 [Mycoplasma fermentans M64]
Length = 224
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 80/214 (37%), Positives = 122/214 (57%), Gaps = 4/214 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK+NP FR G+ N+ WFA + YG L ED KI ++ +++ + ++ I+R
Sbjct: 1 MGQKVNPNGFRYGITKARNTSWFAEKANYGKYLVEDAKIYKFFDKLVRKYQIGQVEIKRN 60
Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPKPEINATLI 116
+ ++SA P ++ + G+ I+KI L N +I+L V + PE+NA L
Sbjct: 61 QANKITVYIHSATPNKLVSEGGSTIDKINVDLHKYLKNKNLDINLQVVLLKNPELNARLA 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
A++IA +LE R FR A K + A++ GA G+K SGRLNG +++RTE Y G + L
Sbjct: 121 AEAIATKLENRESFRIAQKLIINDALKAGAKGIKTAVSGRLNGVDMARTEGYSRGEMRLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210
TLR +DY A A T YG G+KV++S + +
Sbjct: 181 TLRQDVDYAHANAHTTYGVIGVKVWISKGEILEG 214
>gi|238810291|dbj|BAH70081.1| hypothetical protein [Mycoplasma fermentans PG18]
Length = 225
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 80/214 (37%), Positives = 122/214 (57%), Gaps = 4/214 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK+NP FR G+ N+ WFA + YG L ED KI ++ +++ + ++ I+R
Sbjct: 2 MGQKVNPNGFRYGITKARNTSWFAEKANYGKYLVEDAKIYKFFDKLVRKYQIGQVEIKRN 61
Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPKPEINATLI 116
+ ++SA P ++ + G+ I+KI L N +I+L V + PE+NA L
Sbjct: 62 QANKITVYIHSATPNKLVSEGGSTIDKINVDLHKYLKNKNLDINLQVVLLKNPELNARLA 121
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
A++IA +LE R FR A K + A++ GA G+K SGRLNG +++RTE Y G + L
Sbjct: 122 AEAIATKLENRESFRIAQKLIINDALKAGAKGIKTAVSGRLNGVDMARTEGYSRGEMRLH 181
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210
TLR +DY A A T YG G+KV++S + +
Sbjct: 182 TLRQDVDYAHANAHTTYGVIGVKVWISKGEILEG 215
>gi|237688555|ref|YP_002905173.1| ribosomal protein S3 [Pinus contorta]
gi|226875383|gb|ACO89121.1| ribosomal protein S3 [Pinus contorta]
gi|228016974|gb|ACP51798.1| ribosomal protein S3 [Pinus banksiana]
Length = 217
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 82/214 (38%), Positives = 126/214 (58%), Gaps = 12/214 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL--------KQAGV 52
M QKINP+ FRLGV S WFA+ Y L ED KIR ++ ++ G+
Sbjct: 1 MAQKINPLGFRLGVTQNERSHWFAQQRNYSKDLREDQKIRTCIENYVRTHIKSSSNYGGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLI-IGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPK 108
A++ I R ++ +Y P L+ I +G IEK+R + NM + ++H+++ +V K
Sbjct: 61 ARVEIRRNIDLIKVKIYIGFPNLLLIEGRGQGIEKLRNDVLNMLDSVDRKLHIAIEKVAK 120
Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168
P ++A+ IA QLE+RV FR+ MK+A++ A R +G+++ +GRL+G E++R E
Sbjct: 121 PYRKPNILAEYIALQLEKRVPFRKTMKKAIELAEREEVEGIQIQIAGRLDGKEIARVEWD 180
Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202
GRVPLQT+RA IDY +T YG GIK+++
Sbjct: 181 RGGRVPLQTIRARIDYCYYPVKTIYGVLGIKIWI 214
>gi|7524693|ref|NP_042447.1| ribosomal protein S3 [Pinus thunbergii]
gi|1173252|sp|P41635|RR3_PINTH RecName: Full=30S ribosomal protein S3, chloroplastic
gi|1262687|dbj|BAA04403.1| ribosomal protein S3 [Pinus thunbergii]
gi|228015956|gb|ACP50796.1| ribosomal protein S3 [Pinus ponderosa]
gi|228016023|gb|ACP50862.1| ribosomal protein S3 [Pinus resinosa]
gi|228016338|gb|ACP51172.1| ribosomal protein S3 [Pinus taeda]
gi|228016409|gb|ACP51242.1| ribosomal protein S3 [Pinus thunbergii]
gi|228016475|gb|ACP51307.1| ribosomal protein S3 [Pinus torreyana subsp. insularis]
gi|228016536|gb|ACP51367.1| ribosomal protein S3 [Pinus torreyana subsp. torreyana]
gi|228017038|gb|ACP51861.1| ribosomal protein S3 [Pinus canariensis]
gi|228017474|gb|ACP52290.1| ribosomal protein S3 [Pinus merkusii]
gi|228017730|gb|ACP52542.1| ribosomal protein S3 [Pinus pinaster]
Length = 217
Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 82/214 (38%), Positives = 126/214 (58%), Gaps = 12/214 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL--------KQAGV 52
M QKINP+ FRLGV S WFA+ Y L ED KIR ++ ++ G+
Sbjct: 1 MAQKINPLGFRLGVTQNERSHWFAQQRNYSKDLREDQKIRTCIENYVRTHIKSSSNYGGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLI-IGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPK 108
A++ I R ++ +Y P L+ I +G IEK+R + NM + ++H+++ +V K
Sbjct: 61 ARVEIRRKIDLIKVKIYIGFPNLLLIEGRGQGIEKLRNDVLNMLDSVDRKLHIAIEKVAK 120
Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168
P ++A+ IA QLE+RV FR+ MK+A++ A R +G+++ +GRL+G E++R E
Sbjct: 121 PYRKPNILAEYIALQLEKRVPFRKTMKKAIELAEREEVEGIQIQIAGRLDGKEIARVEWD 180
Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202
GRVPLQT+RA IDY +T YG GIK+++
Sbjct: 181 RGGRVPLQTIRARIDYCYYPVKTIYGVLGIKIWI 214
>gi|313678371|ref|YP_004056111.1| 30S ribosomal protein S3 [Mycoplasma bovis PG45]
gi|312950283|gb|ADR24878.1| ribosomal protein S3 [Mycoplasma bovis PG45]
Length = 216
Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 83/216 (38%), Positives = 126/216 (58%), Gaps = 4/216 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FR G+ NS WFA YG LL +D KI ++ +++ + LI+RT
Sbjct: 1 MGQKVNPNGFRYGITKPINSVWFAEKQNYGDLLVQDAKIYKFFDKLVRKYQIGNTLIKRT 60
Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEV---PKPEINATLI 116
+ +++ +++P ++GK GT+IEKI K L ++ +V +PE+NA L
Sbjct: 61 KAQKVTVVLQTSQPAKLLGKNGTNIEKITKDLQKYLKNKSLDINLQVSLLKQPELNARLA 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
A++IAQ+LE R FR A K + A+R GA G+K SGRLNG +++R E Y G + L
Sbjct: 121 AEAIAQKLENRESFRVAQKLVINDALRAGAKGIKTQVSGRLNGVDMARAEGYSRGEMRLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
TLR +D+ A A T YG+ G+KV++S + +
Sbjct: 181 TLRQDVDFAKATARTIYGAIGVKVWISKGELLEGDK 216
>gi|256370786|ref|YP_003108611.1| 30S ribosomal protein S3 [Candidatus Sulcia muelleri SMDSEM]
gi|256009578|gb|ACU52938.1| 30S ribosomal subunit protein S3 [Candidatus Sulcia muelleri
SMDSEM]
Length = 233
Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 88/212 (41%), Positives = 137/212 (64%), Gaps = 3/212 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+N + RLG+ W S W + Y + ED K+R+YL+ L + V++I IER
Sbjct: 1 MGHKVNTLSNRLGLIFGWQSLW---SNNYPERIKEDFKLRKYLENRLAKYNVSRIYIERN 57
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + ++RP +IIGK G ++EK++K+L +T I +++ E+ PE++A L+A++I
Sbjct: 58 LNRVNITISTSRPAMIIGKGGEEVEKLKKELKVLTKKVIQINIFEIKNPELDAVLVAKTI 117
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A++LE + +++A+K + +A+RF A+G+K+ SGRLNGAE++RTE Y EGR+PL T RA
Sbjct: 118 ARKLENKFSYKKAIKICLAAALRFNAEGIKIKISGRLNGAEMARTETYKEGRIPLSTFRA 177
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
IDY A A T YG GIKV++ + D
Sbjct: 178 DIDYSMAEAHTNYGIIGIKVWIMKGEIYGKKD 209
>gi|224534786|ref|ZP_03675358.1| ribosomal protein S3 [Borrelia spielmanii A14S]
gi|224514034|gb|EEF84356.1| ribosomal protein S3 [Borrelia spielmanii A14S]
Length = 291
Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats.
Identities = 82/214 (38%), Positives = 129/214 (60%), Gaps = 3/214 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK++P R+ +N W S+W+ Y +LHED IR + LK IE
Sbjct: 1 MGQKVHPYSLRVKINKDWKSKWYFDKKLYSTILHEDFLIRLEIMKFLKGIKFDISNIEII 60
Query: 60 --THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117
+ +++ + RPG +IG KG ++EKI + L+ +I + + EV +PE++A +IA
Sbjct: 61 RNNPQKVTVVIVTPRPGSVIGLKGANLEKIGQLLTKKIFKKISIKIKEVKRPELDAQIIA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
IA+Q+E RV +R+ +K A+ ++M GA G+K+ +GRL GAE++R+ EGRVPL T
Sbjct: 121 NGIAKQVENRVSYRKVLKSALSTSMLKGAQGLKIKIAGRLGGAEIARSFEVKEGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
LRA+IDYG + A+T YG G+KV++ + +
Sbjct: 181 LRANIDYGFSEAQTTYGIIGVKVWLFKGEVLGRQ 214
>gi|237688492|ref|YP_002905111.1| ribosomal protein S3 [Picea sitchensis]
gi|6094138|sp|O62951|RR3_PICAB RecName: Full=30S ribosomal protein S3, chloroplastic
gi|2959583|gb|AAC95497.1| ribosomal protein S3 [Picea abies]
gi|148905984|gb|ABR16153.1| unknown [Picea sitchensis]
gi|226875320|gb|ACO89059.1| ribosomal protein S3 [Picea sitchensis]
gi|307683685|dbj|BAJ19821.1| ribosomal protein S3 [Picea morrisonicola]
Length = 218
Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats.
Identities = 80/215 (37%), Positives = 126/215 (58%), Gaps = 13/215 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHL--------KQAGV 52
M QKINP+ FRLGV S WFA+ Y L ED KIR ++ ++ G+
Sbjct: 1 MAQKINPLGFRLGVTQNDRSHWFAQQRNYSKDLREDQKIRTCIENYVRTHIKSSSNYGGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLII--GKKGTDIEKIRKKLSNM---TNSEIHLSVNEVP 107
A++ I R ++ +Y P L++ G+ IEK++ + NM + ++H+++ +V
Sbjct: 61 ARVEISRKIDLIQVKIYIGFPNLLLIEGRGFQGIEKLKNDVLNMLDSVDRKLHIAIEKVA 120
Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTEC 167
KP ++A+ IA QLE+RV FR+ MK+A++ A R +G+++ +GRL+G E++R E
Sbjct: 121 KPYRKPNILAEYIALQLEKRVPFRKTMKKAIELAEREEVEGIQIQIAGRLDGKEIARVEW 180
Query: 168 YLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202
GRVPLQT+RA IDY +T YG GIK+++
Sbjct: 181 DRGGRVPLQTIRARIDYCYYPVQTIYGVLGIKIWI 215
>gi|159106902|ref|YP_001531320.1| ribosomal protein S3 [Lolium perenne]
gi|172048166|sp|A8Y9C5|RR3_LOLPR RecName: Full=30S ribosomal protein S3, chloroplastic
gi|158934436|emb|CAO86014.1| ribosomal protein S3 [Lolium perenne]
Length = 239
Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats.
Identities = 77/239 (32%), Positives = 126/239 (52%), Gaps = 32/239 (13%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WFA+ Y L ED KIR+ ++ ++++
Sbjct: 1 MGQKINPLGFRLGTTQKHHSFWFAQPKNYSEGLQEDKKIRDCIKNYIQKNRKKSSNRKLE 60
Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88
+ +I I++ +I++ P L+ K ++EK
Sbjct: 61 SDSSSEVITHNRKNDSGSSSEVITRIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG 148
+K + N +++S+ +V +P ++A+ IA QL+ RV FR+AMK+A++ + G
Sbjct: 121 QKEIHSVNQRLNISIEKVKEPYREPNILAEYIAFQLKNRVSFRKAMKKAMELTKKADIKG 180
Query: 149 VKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
VKV +GRL G E++R EC +GR+PLQT+RA IDY T YG G+K+++ + +E
Sbjct: 181 VKVKIAGRLGGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLGVKIWIFVDEE 239
>gi|124494170|gb|ABN13129.1| ribosomal protein S3 [Gliricidia little leaf phytoplasma]
Length = 248
Score = 201 bits (512), Expect = 6e-50, Method: Composition-based stats.
Identities = 79/215 (36%), Positives = 123/215 (57%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ W S+W+ + L+HED KIR ++ + ++ I I+R
Sbjct: 1 MGQKSNPNGLRLGIIQNWKSQWYIEDKQVPNLVHEDFKIRILIKQFYMKGVISDIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +++++ GLI G K+ +K+ + N ++ ++V EV + A+L+
Sbjct: 61 KKSNNEEITINLFTSKIGLIQGIDNKTKNKLLQKIEKIINKKVLINVFEVKALDKIASLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+I QL++R FR K + Q ++ GA GVK+I SGRL GAE++R+E G VPL
Sbjct: 121 AQNIVIQLQQRSYFRAVQKISAQKVLKSGAKGVKIILSGRLGGAEIARSETISLGLVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
T RA IDY A T YG G+KV++ + +S+
Sbjct: 181 TFRADIDYAFGEAHTTYGVLGVKVWIFHGEVLSNK 215
>gi|42561264|ref|NP_975715.1| 30S ribosomal protein S3 [Mycoplasma mycoides subsp. mycoides SC
str. PG1]
gi|83319775|ref|YP_424654.1| 30S ribosomal protein S3 [Mycoplasma capricolum subsp. capricolum
ATCC 27343]
gi|331703710|ref|YP_004400397.1| 30S ribosomal protein S3 [Mycoplasma mycoides subsp. capri LC str.
95010]
gi|61215584|sp|Q6MSN1|RS3_MYCMS RecName: Full=30S ribosomal protein S3
gi|90110062|sp|P02353|RS3_MYCCT RecName: Full=30S ribosomal protein S3
gi|42492762|emb|CAE77357.1| 30S RIBOSOMAL PROTEIN S3 [Mycoplasma mycoides subsp. mycoides SC
str. PG1]
gi|83283661|gb|ABC01593.1| ribosomal protein S3 [Mycoplasma capricolum subsp. capricolum ATCC
27343]
gi|256383745|gb|ACU78315.1| ribosomal protein S3 [Mycoplasma mycoides subsp. capri str. GM12]
gi|256384576|gb|ACU79145.1| ribosomal protein S3 [Mycoplasma mycoides subsp. capri str. GM12]
gi|296455590|gb|ADH21825.1| ribosomal protein S3 [synthetic Mycoplasma mycoides JCVI-syn1.0]
gi|301321306|gb|ADK69949.1| ribosomal protein S3 [Mycoplasma mycoides subsp. mycoides SC str.
Gladysdale]
gi|328802265|emb|CBW54419.1| 30S ribosomal protein S3 [Mycoplasma mycoides subsp. capri LC str.
95010]
Length = 233
Score = 201 bits (511), Expect = 7e-50, Method: Composition-based stats.
Identities = 88/211 (41%), Positives = 132/211 (62%), Gaps = 3/211 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P + RLG+ W +RW+A +Y L +D+KIR L LK A V+KI IERT
Sbjct: 1 MGQKVSPNVLRLGIVRDWENRWYAEKDQYVKWLDQDIKIRTALFKLLKDAAVSKIDIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIA 117
K+ + + +ARP +++G++G +IEKI +K +++ V E+ P+ +ATL+A
Sbjct: 61 TKDLTLFIKTARPAIVLGQEGKNIEKIVLAVRKTVKNKKLIVNVRVIEIKSPDADATLVA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ I +Q+ R FR K A++ A++ GA G+K SGRL G E++RTE YLEG VPL T
Sbjct: 121 RWIGEQISNRASFRTVQKLAIKKALKAGAKGIKTAVSGRLGGVEMARTEGYLEGSVPLST 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208
LR +IDY A T YG G+KV+++ +
Sbjct: 181 LRNNIDYALYEAPTTYGQIGVKVWINHGEVF 211
>gi|313665571|ref|YP_004047442.1| ribosomal protein S3 [Mycoplasma leachii PG50]
gi|312950053|gb|ADR24649.1| ribosomal protein S3 [Mycoplasma leachii PG50]
Length = 233
Score = 201 bits (511), Expect = 7e-50, Method: Composition-based stats.
Identities = 87/211 (41%), Positives = 131/211 (62%), Gaps = 3/211 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P + RLG+ W +RW+A +Y L +D+KIR L LK A V+KI IERT
Sbjct: 1 MGQKVSPNVLRLGIVRDWENRWYAEKDQYVKWLDQDIKIRTALFKLLKDAAVSKIDIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIA 117
K+ + + +ARP +++G++G +IEKI +K +++ V E+ P+ +ATL+A
Sbjct: 61 TKDLTLFIKTARPAIVLGQEGKNIEKIVLAVRKTVKNKKLIVNVRVIEIKSPDADATLVA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ I +Q+ R FR K A++ A++ G G+K SGRL G E++RTE YLEG VPL T
Sbjct: 121 RWIGEQISNRASFRTVQKLAIKKALKAGVKGIKTAVSGRLGGVEMARTEGYLEGSVPLST 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208
LR +IDY A T YG G+KV+++ +
Sbjct: 181 LRNNIDYALYEAPTTYGQIGVKVWINHGEVF 211
>gi|121511596|gb|ABM55292.1| ribosomal protein S3 [Pigeon pea witches'-broom phytoplasma]
gi|121511599|gb|ABM55294.1| ribosomal protein S3 [Pigeon pea witches'-broom phytoplasma]
gi|121511602|gb|ABM55296.1| ribosomal protein S3 [Pigeon pea witches'-broom phytoplasma]
Length = 248
Score = 200 bits (510), Expect = 9e-50, Method: Composition-based stats.
Identities = 79/215 (36%), Positives = 123/215 (57%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ W S+W+ + L+HED KIR ++ + ++ I I+R
Sbjct: 1 MGQKSNPNGLRLGIIQNWKSQWYIEDKQVPNLVHEDFKIRILIKQFYIKGVISDIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +++++ GLI G K+ +K+ + N ++ ++V EV + A+L+
Sbjct: 61 KKSNNEEITINLFTSKIGLIQGIDNKTKNKLLQKIEKIINKKVLINVFEVKALDKIASLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+I QL++R FR K + Q ++ GA GVK+I SGRL GAE++R+E G VPL
Sbjct: 121 AQNIVIQLQQRSYFRAVQKISAQKVLKSGAKGVKIILSGRLGGAEIARSETISLGLVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
T RA IDY A T YG G+KV++ + +S+
Sbjct: 181 TFRADIDYAFEEAHTTYGVLGVKVWIFHGEVLSNK 215
>gi|11466828|ref|NP_039424.1| ribosomal protein S3 [Oryza sativa Japonica Group]
gi|50234010|ref|YP_052788.1| ribosomal protein S3 [Oryza nivara]
gi|109156623|ref|YP_654242.1| ribosomal protein S3 [Oryza sativa Indica Group]
gi|68052945|sp|Q6END5|RR3_ORYNI RecName: Full=30S ribosomal protein S3, chloroplastic
gi|148840859|sp|P0C483|RR3_ORYSA RecName: Full=30S ribosomal protein S3, chloroplastic
gi|148840860|sp|P0C484|RR3_ORYSI RecName: Full=30S ribosomal protein S3, chloroplastic
gi|148840861|sp|P0C485|RR3_ORYSJ RecName: Full=30S ribosomal protein S3, chloroplastic
gi|12025|emb|CAA33934.1| ribosomal protein S3 [Oryza sativa Japonica Group]
gi|42795515|gb|AAS46082.1| ribosomal protein S3 [Oryza sativa Indica Group]
gi|42795581|gb|AAS46147.1| ribosomal protein S3 [Oryza sativa Japonica Group]
gi|42795645|gb|AAS46210.1| ribosomal protein S3 [Oryza sativa Japonica Group]
gi|49615034|dbj|BAD26817.1| ribosomal protein S3 [Oryza nivara]
gi|50725165|dbj|BAD33782.1| ribosomal protein S3 [Oryza sativa Japonica Group]
gi|51091521|dbj|BAD36259.1| ribosomal protein S3 [Oryza sativa Japonica Group]
gi|218200203|gb|EEC82630.1| hypothetical protein OsI_27221 [Oryza sativa Indica Group]
gi|218202023|gb|EEC84450.1| hypothetical protein OsI_31072 [Oryza sativa Indica Group]
gi|290790601|gb|ADD62861.1| ribosomal protein S3 [Oryza sativa Japonica Group]
gi|290790670|gb|ADD62929.1| ribosomal protein S3 [Oryza meridionalis]
gi|226646|prf||1603356BW ribosomal protein S3
Length = 239
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 77/239 (32%), Positives = 123/239 (51%), Gaps = 32/239 (13%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60
Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88
+ I I++ +I++ P L+ K ++EK
Sbjct: 61 ADSSFEVITHNKKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG 148
+K N N +++ + +V +P ++A+ IA QL+ RV FR+AMK+A++ + G
Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKTDIKG 180
Query: 149 VKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
VKV +GRL G E++R EC +GR+PLQT+RA IDY T YG G+K+++ + +E
Sbjct: 181 VKVKIAGRLAGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLGVKIWIFVDEE 239
>gi|11466969|ref|NP_054390.1| ribosomal protein S3 [Epifagus virginiana]
gi|266974|sp|P30055|RR3_EPIVI RecName: Full=Plastid 30S ribosomal protein S3
gi|336936|gb|AAA65864.1| ribosomal protein S3 [Epifagus virginiana]
Length = 220
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 74/220 (33%), Positives = 124/220 (56%), Gaps = 13/220 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + +S WFA+ Y + ED KIR++++ ++K G+
Sbjct: 1 MGQKINPLGFRLGTTQSHHSFWFAQPKNYYKGIQEDQKIRDFIKNYVKNNIIISPDTEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR-----KKLSNMTNSEIHLSVNEVP 107
A I I++ +I+++ +I + I K KK + N ++ + + +
Sbjct: 61 AYIEIQKRIDFLKIMIFIGFKKFLIENRQLGIIKEALHIDLKKNFHYVNRKLIIDIIRIT 120
Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTEC 167
KP N ++A+ IA QL+ RV FR+ MK+A++ G++V SGR++G E++R E
Sbjct: 121 KPYRNPNILAEFIADQLKNRVSFRKTMKKAIELTESEDTKGIQVQISGRIDGKEIARVEW 180
Query: 168 YLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT++A I+Y + + T +G GIK+++ + E
Sbjct: 181 IREGRVPLQTIQAKINYCSYMVRTTHGVLGIKIWIFIEKE 220
>gi|290790739|gb|ADD62997.1| ribosomal protein S3 [Oryza australiensis]
Length = 239
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 77/239 (32%), Positives = 123/239 (51%), Gaps = 32/239 (13%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60
Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88
+ I I++ +I++ P L+ K ++EK
Sbjct: 61 SDSSFEVITHNKKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG 148
+K N N +++ + +V +P ++A+ IA QL+ RV FR+AMK+A++ + G
Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKTDIKG 180
Query: 149 VKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
VKV +GRL G E++R EC +GR+PLQT+RA IDY T YG G+K+++ + +E
Sbjct: 181 VKVKIAGRLAGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLGVKIWIFVDEE 239
>gi|255961420|ref|YP_003097613.1| ribosomal protein S3 [Dendrocalamus latiflorus]
gi|255040297|gb|ACT99957.1| ribosomal protein S3 [Dendrocalamus latiflorus]
Length = 239
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 77/239 (32%), Positives = 124/239 (51%), Gaps = 32/239 (13%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60
Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88
+ I I++ +I++ P L+ K ++EK
Sbjct: 61 SDSSSEVITHNRKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG 148
+K N N +++++ +V +P ++A+ IA QL+ RV FR+AMK+A++ + G
Sbjct: 121 QKEVNSVNQRLNIAIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIRG 180
Query: 149 VKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
VKV +GRL G E++R EC +GR+PLQT+RA IDY T YG G+K+++ + +E
Sbjct: 181 VKVKIAGRLAGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLGVKIWIFVDEE 239
>gi|118430340|ref|YP_874775.1| ribosomal protein S3 [Agrostis stolonifera]
gi|125987745|sp|A1EA47|RR3_AGRST RecName: Full=30S ribosomal protein S3, chloroplastic
gi|118201249|gb|ABK79618.1| ribosomal protein S3 [Agrostis stolonifera]
Length = 239
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 77/239 (32%), Positives = 125/239 (52%), Gaps = 32/239 (13%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 MGQKINPLGFRLGTTQKHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60
Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88
+ +I I++ +I++ P L+ K ++EK
Sbjct: 61 SDSSSEVITHNRKTDSGSSSEVITRIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG 148
+K + N +++S+ +V +P ++A+ IA QL+ RV FR+AMK+A++ + G
Sbjct: 121 QKEIHSVNQRLNISIEKVKEPYREPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIRG 180
Query: 149 VKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
VKV +GRL G E++R EC +GR+PLQT+RA IDY T YG G+K+++ + +E
Sbjct: 181 VKVKIAGRLGGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLGVKIWIFVDEE 239
>gi|240047265|ref|YP_002960653.1| 30S ribosomal protein S3 [Mycoplasma conjunctivae HRC/581]
gi|239984837|emb|CAT04827.1| 30S ribosomal protein S3 [Mycoplasma conjunctivae]
Length = 226
Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 90/228 (39%), Positives = 141/228 (61%), Gaps = 6/228 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FR G+ N+ WFA + + + L ED+KI + + ++ +A I R
Sbjct: 1 MGQKVNPNGFRYGITKEHNAFWFAEKATFASKLLEDVKIHRFFEKKTREYQIANTAIRRD 60
Query: 61 -HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPKPEINATLI 116
N I+V++A+ G +G+ G ++++I ++L + I++ V EV PE+NA LI
Sbjct: 61 RQNNITIVVHTAKLGQFLGQGGQNLKQIIEELKKHLRNKKANINIDVVEVKTPELNAKLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
A+SIA +LE R FR A K A+++AM+ GA GVK SGRLNG +++R+E Y EG + L
Sbjct: 121 AESIAIKLENRGSFRIAQKFAIRTAMKAGAKGVKTKVSGRLNGVDMARSEGYSEGEMKLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
TLR ++DY TA A T YG+ GIKV++SL + ++ S + ++ R +
Sbjct: 181 TLRQNVDYATATARTTYGALGIKVWISLGE--FNNKSDVKSSPKRKGK 226
>gi|290790807|gb|ADD63064.1| ribosomal protein S3 [Potamophila parviflora]
Length = 239
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 77/239 (32%), Positives = 124/239 (51%), Gaps = 32/239 (13%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60
Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88
+ I I++ +I++ P L+ K ++EK
Sbjct: 61 SDSSSEVITHNRKMESDSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG 148
+K N N +++ + +V +P +++A+ IA QL+ RV FR+AMK+A++ + G
Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPSILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKG 180
Query: 149 VKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
VKV +GRL G E++R EC +GR+PLQT+RA IDY T YG G+K+++ + +E
Sbjct: 181 VKVKIAGRLAGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLGVKIWIFIDEE 239
>gi|31075927|gb|AAP42408.1| ribosomal protein S3 [Potato witches'-broom phytoplasma]
gi|31075930|gb|AAP42410.1| ribosomal protein S3 [Potato witches'-broom phytoplasma]
gi|121511569|gb|ABM55274.1| ribosomal protein S3 [Candidatus Phytoplasma trifolii]
gi|121511572|gb|ABM55276.1| ribosomal protein S3 [Potato witches'-broom phytoplasma]
gi|121511578|gb|ABM55280.1| ribosomal protein S3 [Brinjal little leaf phytoplasma]
Length = 250
Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats.
Identities = 81/215 (37%), Positives = 125/215 (58%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+A + +L+ ED +IR ++ H +A +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYAEDKQVPSLVCEDFQIRNLIKNHYPKATISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y+++ GLI G + + K+ N+ +I +++ EV A L+
Sbjct: 61 KKSNDEVIEIELYTSKIGLIQGPDNKNKNSLVSKIENLIKKKIQINIFEVKAVNKIAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R ++ K AVQ A+R G G+K+I +GRL GAE +R E G VPL
Sbjct: 121 AQNIAIQLQQRAFYKAVQKSAVQKALRSGVKGIKIIITGRLGGAEKARQESISMGVVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG G+KV ++ + + +
Sbjct: 181 TLRADIDYACEEAHTTYGVLGVKVIINHGEVLPNK 215
>gi|121511587|gb|ABM55286.1| ribosomal protein S3 [Candidatus Phytoplasma fraxini]
Length = 253
Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats.
Identities = 78/215 (36%), Positives = 125/215 (58%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+ + AL+ ED +IR ++ H + +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYGEHKQVPALIVEDFRIRNLIKNHYPKVTISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y+ + GL+ G++ + + +K+ + N ++ ++V EV A L+
Sbjct: 61 KKSNDEFVEIELYTCKIGLVQGQENKNKINLIQKIEKLINKKVQINVFEVKAVNKIAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R ++ K A+Q A+R G G+K+I +GRL GAE +R E G VPL
Sbjct: 121 AQNIAMQLQQRAFYKAVQKNAMQKALRSGVKGIKIIITGRLGGAEKARQESVAMGVVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG G+KV ++ + + +
Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215
>gi|218672112|ref|ZP_03521781.1| 30S ribosomal protein S3 [Rhizobium etli GR56]
Length = 190
Score = 199 bits (505), Expect = 3e-49, Method: Composition-based stats.
Identities = 114/173 (65%), Positives = 143/173 (82%), Gaps = 3/173 (1%)
Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINAT 114
++IER HK CR+ ++SARPGLIIG+KG DI+K+RKKLS+MTNSE HL++ EV KPE++AT
Sbjct: 1 MVIERPHKKCRVTIHSARPGLIIGRKGADIDKLRKKLSDMTNSETHLNIVEVRKPEVDAT 60
Query: 115 LIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVP 174
L+AQSIAQQLERRV FRRAMKRAVQSAMR GA+G+K+ +GRL GAE++RTE Y EGRVP
Sbjct: 61 LVAQSIAQQLERRVAFRRAMKRAVQSAMRLGAEGIKITCAGRLGGAEIARTEWYREGRVP 120
Query: 175 LQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
L TLRA IDYGTA AETA+G CGIKV++ + E+ + D A+E R +E D+
Sbjct: 121 LHTLRADIDYGTAEAETAFGICGIKVWIF-KGEILEHDPM--ASERRALEGDA 170
>gi|170784733|ref|YP_001718649.1| ribosomal protein S3 [Trachelium caeruleum]
gi|156598789|gb|ABU85648.1| ribosomal protein S3 [Trachelium caeruleum]
gi|157267481|gb|ABV26474.1| ribosomal protein S3 [Trachelium caeruleum]
Length = 232
Score = 199 bits (505), Expect = 3e-49, Method: Composition-based stats.
Identities = 68/232 (29%), Positives = 117/232 (50%), Gaps = 25/232 (10%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVA------K 54
MGQKINP+ RLG + +S WFA+ Y L ED KIR Y++ ++++ + +
Sbjct: 1 MGQKINPLGLRLGTTQSHHSLWFAKPKNYSKELQEDEKIRYYIKNYVEKNMTSSVRALIR 60
Query: 55 ILIERTHKNCRIIVY-SARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSV---------- 103
I IE+ + +Y P + K K + + ++
Sbjct: 61 IEIEKAVDVTTMKIYIVPAPAEVFNKHYRRESKNLQPNLQKKFASVNQKFDLKTRKLIYV 120
Query: 104 --------NEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155
++ +P + ++A+ I+ QL++R+ FR+AMK+A++ A + G++V +G
Sbjct: 121 IPKFNLTLIKIFEPYRHPNILAEFISDQLQQRIPFRKAMKKAIELAKQANTKGIRVQIAG 180
Query: 156 RLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
R+ G E++R E +GRVPLQT++A IDY T YG GIK+++ + E
Sbjct: 181 RIGGKEIARVEWIRDGRVPLQTIQAKIDYCCYPVRTIYGVLGIKIWIFIEGE 232
>gi|121511584|gb|ABM55284.1| ribosomal protein S3 [Vinca virescence phytoplasma]
gi|121511593|gb|ABM55290.1| ribosomal protein S3 [Catharanthus phyllody phytoplasma]
Length = 250
Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats.
Identities = 81/215 (37%), Positives = 124/215 (57%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+A + +L+ ED +IR ++ H +A +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYAEDKQVPSLVCEDFQIRNLIKNHYPKATISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K I +Y+++ GLI G + + K+ N+ +I +++ EV A L+
Sbjct: 61 KKTNDEVIEIELYTSKIGLIQGPDNKNKNSLVSKIENLIKKKIQINIFEVKAVNKIAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R ++ K AVQ A+R G G+K+I +GRL GAE +R E G VPL
Sbjct: 121 AQNIAIQLQQRAFYKAVQKSAVQKALRSGVKGIKIIITGRLGGAEKARQESISMGVVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG G+KV ++ + + +
Sbjct: 181 TLRADIDYACEEAHTTYGVLGVKVIINHGEVLPNK 215
>gi|950059|emb|CAA83692.1| 30S ribosomal protein [Mycoplasma capricolum subsp. capricolum ATCC
27343]
Length = 233
Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats.
Identities = 87/211 (41%), Positives = 131/211 (62%), Gaps = 3/211 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P + RLG+ W +RW+A +Y L +D+KIR L LK A V+KI IERT
Sbjct: 1 MGQKVSPNVLRLGIVRDWENRWYAEKDQYVKWLDQDIKIRTALFKLLKDAAVSKIDIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIA 117
K+ + + +ARP +++G++G +IEKI +K +++ V E+ P+ +ATL+
Sbjct: 61 TKDLTLFIKTARPAIVLGQEGKNIEKIVLAVRKTVKNKKLIVNVRVIEIKSPDADATLVV 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ I +Q+ R FR K A++ A++ GA G+K SGRL G E++RTE YLEG VPL T
Sbjct: 121 RWIGEQISNRASFRTVQKLAIKKALKAGAKGIKTAVSGRLGGVEMARTEGYLEGSVPLST 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208
LR +IDY A T YG G+KV+++ +
Sbjct: 181 LRNNIDYALYEAPTTYGQIGVKVWINHGEVF 211
>gi|121511590|gb|ABM55288.1| ribosomal protein S3 [Candidatus Phytoplasma fraxini]
Length = 253
Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats.
Identities = 78/215 (36%), Positives = 125/215 (58%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+ + AL+ ED +IR ++ H + +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYGEHKQVPALIVEDFRIRNLIKNHYSKVTISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y+ + GL+ G++ + + +K+ + N ++ ++V EV A L+
Sbjct: 61 KKSNDEFVEIELYTCKIGLVQGQENKNKINLIQKIEKLINKKVQINVFEVKAVNKIAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R ++ K A+Q A+R G G+K+I +GRL GAE +R E G VPL
Sbjct: 121 AQNIAMQLQQRAFYKAVQKNAMQKALRSGVKGIKIIITGRLGGAEKARQESVAMGVVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG G+KV ++ + + +
Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215
>gi|126680607|gb|ABO26530.1| ribosomal protein S3 [Pigeon pea witches'-broom phytoplasma]
Length = 248
Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats.
Identities = 78/215 (36%), Positives = 123/215 (57%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ W S+W+ + L+HED KIR ++ + ++ I I+R
Sbjct: 1 MGQKSNPNGLRLGIIQNWKSQWYIEDKQVPNLVHEDFKIRILIKQFYIKGVISDIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +++++ GLI G K+ +K+ + N ++ ++V EV + A+L+
Sbjct: 61 KKSNNEEITINLFTSKIGLIQGIDNKTKNKLLQKIEKIINKKVLINVFEVKALDKIASLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+I QL++R FR K + Q ++ GA GVK+I SGRL GAE++R+E G VPL
Sbjct: 121 AQNIVIQLQQRSYFRAVQKISAQKVLKSGAKGVKIILSGRLGGAEIARSETISLGLVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
T RA IDY A T YG G+K+++ + +S+
Sbjct: 181 TFRADIDYAFEEAHTTYGVLGVKIWIFHGEVLSNK 215
>gi|281412735|ref|YP_003346814.1| ribosomal protein S3 [Thermotoga naphthophila RKU-10]
gi|281373838|gb|ADA67400.1| ribosomal protein S3 [Thermotoga naphthophila RKU-10]
Length = 205
Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats.
Identities = 90/202 (44%), Positives = 138/202 (68%), Gaps = 2/202 (0%)
Query: 6 NPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT-HKNC 64
+P FRLG++ W ++WF Y L ED +IR++++ AG+++I +ER +
Sbjct: 2 HPRGFRLGLSADWQAKWF-NEKNYKEWLLEDEEIRKFIKNKYYHAGISEIYVERPDAERI 60
Query: 65 RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQL 124
I V +ARPG+IIG+KG +I +R++L N + +++ E+ PE++A L+A+SIA ++
Sbjct: 61 NITVKTARPGIIIGRKGAEITSLREELERKFNRRVVINIEEIKTPELDAQLVAESIASRI 120
Query: 125 ERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDY 184
E+R ++ AMKRA+ +AMR GA G+KV+ +GRL GAE++R E YL GR+PLQ L+A IDY
Sbjct: 121 EKRASYKVAMKRAIMNAMRKGAQGIKVMVAGRLGGAEIARREWYLRGRLPLQKLKAIIDY 180
Query: 185 GTAVAETAYGSCGIKVYVSLRD 206
GTA A T YG+ GIKV++ D
Sbjct: 181 GTATAWTKYGTIGIKVWIYKGD 202
>gi|118430425|ref|YP_874691.1| ribosomal protein S3 [Hordeum vulgare subsp. vulgare]
gi|152060535|sp|A1E9M9|RR3_HORVU RecName: Full=30S ribosomal protein S3, chloroplastic
gi|118201079|gb|ABK79450.1| ribosomal protein S3 [Hordeum vulgare subsp. vulgare]
Length = 239
Score = 198 bits (504), Expect = 5e-49, Method: Composition-based stats.
Identities = 77/239 (32%), Positives = 122/239 (51%), Gaps = 32/239 (13%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WFA+ Y L ED KIR+ ++ ++++
Sbjct: 1 MGQKINPLGFRLGTTQKHHSFWFAQPKNYSEGLQEDKKIRDCIKNYIQKNRKKGSNRKIE 60
Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88
+ I I++ +I++ P L+ K ++EK
Sbjct: 61 SDSSSEVITHNRKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG 148
+K N N ++S+ +V +P ++A+ IA QL+ RV FR+AMK+A++ + G
Sbjct: 121 QKEINSVNQRFNISIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIRG 180
Query: 149 VKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
VKV +GRL G E++R E GR+PLQT+RA IDY T YG G+K+++ + +E
Sbjct: 181 VKVKIAGRLGGKEIARAESIKRGRLPLQTIRAKIDYCCYPIRTIYGVLGVKIWIFVDEE 239
>gi|255631141|gb|ACU15936.1| unknown [Glycine max]
Length = 206
Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats.
Identities = 75/206 (36%), Positives = 121/206 (58%), Gaps = 11/206 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + +S WFA+ + Y + ED KIR+ ++ ++++ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHDSIWFAQPTNYSENIQEDKKIRDCIKNYIQKNIRISSGVEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK---IRKKLSNMTNSEIHLSVNEVPKP 109
+I I++ ++I+Y P +I K IE+ +K N N ++++++ +V
Sbjct: 61 GQIKIQKRIDLIQVIIYMGFPKFLIEGKSQKIEELQTNMQKKLNCVNRKLNIAIVKVANA 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ +IA+ IA QL+ RV FR+AMK+A++ + G GV+V +GR++G E++R E
Sbjct: 121 YKHPNIIAEFIAGQLKNRVSFRKAMKKAIELTEQAGTKGVQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGS 195
EGRVPLQT+RA IDY T YG
Sbjct: 181 EGRVPLQTIRAKIDYCCYTVRTIYGV 206
>gi|14017610|ref|NP_114296.1| ribosomal protein S3 [Triticum aestivum]
gi|27734484|sp|Q95H49|RR3_WHEAT RecName: Full=30S ribosomal protein S3, chloroplastic
gi|13928243|dbj|BAB47072.1| ribosomal protein S3 [Triticum aestivum]
Length = 239
Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats.
Identities = 77/239 (32%), Positives = 123/239 (51%), Gaps = 32/239 (13%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WFA+ Y L ED KIR+ ++ ++++
Sbjct: 1 MGQKINPLGFRLGTTQKHHSFWFAQPKNYSEGLQEDKKIRDCIKNYIQKNRKKGSNRKIE 60
Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88
+ I I++ +I++ P L+ K ++EK
Sbjct: 61 SDSSSEVITHNRKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG 148
+K N N ++S+ +V +P ++A+ IA QL+ RV FR+AMK+A++ + G
Sbjct: 121 QKEINSVNQRFNISIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIRG 180
Query: 149 VKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
VKV +GRL G E++R E +GR+PLQT+RA IDY T YG G+K+++ + +E
Sbjct: 181 VKVKIAGRLGGKEIARAESIKKGRLPLQTIRAKIDYCCYPIRTIYGVLGVKIWIFVDEE 239
>gi|40253570|dbj|BAD05516.1| ribosomal protein S3 [Oryza sativa Japonica Group]
Length = 239
Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats.
Identities = 76/239 (31%), Positives = 122/239 (51%), Gaps = 32/239 (13%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60
Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88
+ I I++ +I++ P L+ K ++EK
Sbjct: 61 ADSSFEVITHNKKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG 148
+K N N +++ + +V +P ++ + IA QL+ RV FR+AMK+A++ + G
Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILVEYIAFQLKNRVSFRKAMKKAIELTKKTDIKG 180
Query: 149 VKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
VKV +GRL G E++R EC +GR+PLQT+RA IDY T YG G+K+++ + +E
Sbjct: 181 VKVKIAGRLAGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLGVKIWIFVDEE 239
>gi|253729593|ref|YP_003029777.1| ribosomal protein S3 [Bambusa oldhamii]
gi|246367103|gb|ACS94714.1| ribosomal protein S3 [Bambusa oldhamii]
Length = 239
Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats.
Identities = 76/239 (31%), Positives = 125/239 (52%), Gaps = 32/239 (13%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60
Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88
+ I I++ +I++ P L+ K ++EK
Sbjct: 61 SDSSSEVITHNRKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG 148
+K N N +++++ +V +P +++A+ IA +L+ RV FR+AMK+A++ + G
Sbjct: 121 QKEVNSVNQRLNIAIEKVKEPYRQPSILAEYIAFKLKNRVSFRKAMKKAIELTQKADIRG 180
Query: 149 VKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
VKV +GRL G E++R EC +GR+PLQT+RA IDY T YG G+K+++ + +E
Sbjct: 181 VKVKIAGRLAGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLGVKIWIFIDEE 239
>gi|121511575|gb|ABM55278.1| ribosomal protein S3 [Lucerne virescence phytoplasma]
Length = 250
Score = 197 bits (501), Expect = 8e-49, Method: Composition-based stats.
Identities = 81/215 (37%), Positives = 124/215 (57%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+A + +L+ ED +IR ++ H +A +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYAEDKQVPSLVCEDFQIRNLIKNHYPKATISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y+++ GLI G + + K+ N+ +I +++ EV A L+
Sbjct: 61 KKSNDKVIEIELYTSKIGLIQGPDNKNKNSLVSKIENLIKKKIQINIFEVKAVNKIAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R ++ K AVQ A+R G G+K+I GRL GAE +R E G VPL
Sbjct: 121 AQNIAIQLQQRAFYKAVQKSAVQKALRSGVKGIKIIIKGRLGGAEKARQESISMGVVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG G+KV ++ + + +
Sbjct: 181 TLRADIDYACEEAHTTYGVLGVKVIINHGEVLPNK 215
>gi|194033185|ref|YP_002000524.1| ribosomal protein S3 [Brachypodium distachyon]
gi|193075593|gb|ACF08676.1| ribosomal protein S3 [Brachypodium distachyon]
Length = 239
Score = 197 bits (501), Expect = 9e-49, Method: Composition-based stats.
Identities = 77/239 (32%), Positives = 124/239 (51%), Gaps = 32/239 (13%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 MGQKINPLGFRLGTTQKHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60
Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKK-GTDIEKIR 88
+ I I++ +I++ P L+ K ++EK
Sbjct: 61 SDSSSEVITHNRKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGVIEELEKDL 120
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG 148
+K N N +++S+ +V +P ++A+ IA QL+ RV FR+A+K+A++ + G
Sbjct: 121 QKEINSVNQRLNISIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAIKKAIELTKKADIRG 180
Query: 149 VKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
VKV +GRL G E++R EC +GR+PLQT+RA IDY T YG G+K+++ + +E
Sbjct: 181 VKVKIAGRLGGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLGVKIWIFVDEE 239
>gi|115391939|ref|YP_778528.1| ribosomal protein S3 [Jasminum nudiflorum]
gi|122164935|sp|Q06R93|RR3_JASNU RecName: Full=30S ribosomal protein S3, chloroplastic
gi|110456260|gb|ABG74665.1| ribosomal protein S3 [Jasminum nudiflorum]
Length = 221
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 71/221 (32%), Positives = 126/221 (57%), Gaps = 14/221 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA---------- 50
MGQKINP+ FRLG +S W ++ Y L ED IR+++Q ++++
Sbjct: 1 MGQKINPLGFRLGTTQGHHSLWISQPKNYSKGLKEDQNIRDFIQNYIQKNMRISSRDRVE 60
Query: 51 GVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRK----KLSNMTNSEIHLSVNEV 106
G+A+I I++T +II++ P +K + K + K + ++ +++ ++
Sbjct: 61 GIARIEIKKTIDLIQIIIFMGFPIENRPRKVKEKIKELQIHLEKEFHYVKKKLKIAITKI 120
Query: 107 PKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTE 166
KP N ++A+ +A QL+ RV FR+AMK+A++ A + +G++V +GR+NG +++R E
Sbjct: 121 AKPYQNPKILAEFLAGQLKDRVSFRKAMKKAIELAEQADTEGIRVQMAGRINGKDIARVE 180
Query: 167 CYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
GR+PLQT+R IDY T YG GIK+++ + ++
Sbjct: 181 WIRRGRLPLQTIRTKIDYCCYTIRTIYGVLGIKIWIFIDEK 221
>gi|295311783|ref|YP_003587504.1| ribosomal protein S3 [Oncidium Gower Ramsey]
gi|254833160|gb|ACT83163.1| ribosomal protein S3 [Oncidium Gower Ramsey]
Length = 218
Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 73/218 (33%), Positives = 125/218 (57%), Gaps = 11/218 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG + +S WFA+ + + ED IR ++ ++K+ G+
Sbjct: 1 MGQKINPLGFRLGTTQSHHSFWFAKPKNFSMGIQEDEIIRNCIKDYVKKNNKISSGFEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGT---DIEKIRKKLSNMTNSEIHLSVNEVPKP 109
A I I++ +II+ P +I + +++ +K + N +++++ + KP
Sbjct: 61 AHIGIQKRIDLIQIIISIGFPNFLIEGRTRGVEELQMNVQKEFHSVNRRLNIAITRIEKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
++A+ IA QL+ RV FR+A+K+A++ + G G++V +GR++G E++R E
Sbjct: 121 YGQPNILAEYIALQLKNRVSFRKAIKKAIELTEQTGTKGIQVQIAGRIDGKEIARVEWIR 180
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
EGRVPLQT+RA ID+ + T YG GIK+++ L E
Sbjct: 181 EGRVPLQTIRAKIDHCSHTIRTIYGVLGIKIWIFLNQE 218
>gi|44215|emb|CAA29710.1| unnamed protein product [Mycoplasma capricolum subsp. capricolum
ATCC 27343]
Length = 233
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 86/211 (40%), Positives = 130/211 (61%), Gaps = 3/211 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P + RLG+ W +RW+A +Y L +D+KIR L LK A V+KI IERT
Sbjct: 1 MGQKVSPNVLRLGIVRDWENRWYAEKDQYVKWLDQDIKIRTALFKLLKDAAVSKIDIERT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIA 117
K+ + + +ARP +++G++G +IEKI +K +++ V E+ P+ +TL+A
Sbjct: 61 TKDLTLFIKTARPAIVLGQEGKNIEKIVLAVRKTVKNKKLIVNVRVIEIKSPDARSTLVA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ I +Q+ R FR K A++ A++ GA G+K SGRL G E++RTE YLE VPL T
Sbjct: 121 RWIGEQISNRASFRTVQKLAIKKALKAGAKGIKTAVSGRLGGVEMARTEGYLECSVPLST 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208
LR +IDY A T YG G+KV+++ +
Sbjct: 181 LRNNIDYALYEAPTTYGQIGVKVWINHGEVF 211
>gi|229915462|gb|ACQ90807.1| ribosomal protein S3 [Oocystis solitaria]
Length = 225
Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 76/225 (33%), Positives = 123/225 (54%), Gaps = 20/225 (8%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ FRLG+ S+WF + +Y L ED +R+ + +A + +I ++R
Sbjct: 1 MGQKVNPLGFRLGITQKHKSQWFMKVPQYSQLSVEDFFLRKIISNKFLEAKITEITVQRK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN--------------------MTNSEIH 100
RI + +A I G+ G+ +++ +K+L + ++
Sbjct: 61 LDQIRIEIQAAETQFITGRDGSQLDEFKKELEKELRTFRKNNFYFYKNIFSESIEKPQLS 120
Query: 101 LSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGA 160
L V + P A +A+ + +++++R FRRA+K+ +Q A + G+K+ SGRLNGA
Sbjct: 121 LHVIKKSNPNFEAAFLAEFLVEEIQKRTPFRRAIKQTIQLAQKAKVKGIKIQISGRLNGA 180
Query: 161 ELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
E++RTE +GRVPLQTLRA IDY A+T YG GIK++V
Sbjct: 181 EIARTEWVRQGRVPLQTLRATIDYSYRTAKTIYGIIGIKIWVFKG 225
>gi|54020076|ref|YP_115707.1| 30S ribosomal protein S3 [Mycoplasma hyopneumoniae 232]
gi|161611222|ref|YP_278986.2| 30S ribosomal protein S3 [Mycoplasma hyopneumoniae J]
gi|61215438|sp|Q601K8|RS3_MYCH2 RecName: Full=30S ribosomal protein S3
gi|152060879|sp|Q4AAE6|RS3_MYCHJ RecName: Full=30S ribosomal protein S3
gi|53987249|gb|AAV27450.1| 30s ribosomal protein S3 [Mycoplasma hyopneumoniae 232]
gi|144227502|gb|AAZ44275.2| 30S ribosomal protein S3 [Mycoplasma hyopneumoniae J]
Length = 227
Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats.
Identities = 82/226 (36%), Positives = 135/226 (59%), Gaps = 4/226 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FR G+ N+ W+A +++ L ED+KI + + ++ + +I R
Sbjct: 1 MGQKVNPNGFRFGITRNHNAIWYADKNKFSINLLEDVKIHRFFEKLTREYQIGNTVIRRD 60
Query: 61 HKN-CRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE---IHLSVNEVPKPEINATLI 116
N ++VY+A+ G +G G +++KI +KL + I++ ++ PE+NA L+
Sbjct: 61 RNNAITVLVYTAKLGSFLGASGENLKKIVEKLRKTLKNRKIVINVDAVDIQSPELNAKLM 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
A+ IA++LE+R +R A K A+++A++ GA GVK I GRLNG E++R E Y EG + L
Sbjct: 121 AELIAEKLEQRKSYRIAQKFAIRTALKNGATGVKTIVCGRLNGVEMARCEGYAEGEMKLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
TLR +++Y TA+A+T YG G+KV+VSL + +D +
Sbjct: 181 TLRQNVEYATAIAKTTYGILGVKVWVSLGEIKEKTDIDAIIRADKR 226
>gi|312601080|gb|ADQ90335.1| 30S ribosomal protein S3 [Mycoplasma hyopneumoniae 168]
Length = 227
Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats.
Identities = 82/226 (36%), Positives = 135/226 (59%), Gaps = 4/226 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FR G+ N+ W+A +++ L ED+KI + + ++ + +I R
Sbjct: 1 MGQKVNPNGFRFGITRNHNAIWYADKNKFSINLLEDVKIHRFFEKLTREYQIGNTVIRRD 60
Query: 61 HKN-CRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE---IHLSVNEVPKPEINATLI 116
N ++VY+A+ G +G G +++KI +KL + I++ ++ PE+NA L+
Sbjct: 61 RNNAITVLVYTAKLGSFLGASGENLKKIVEKLRKTLKNRKIVINVDAVDIQSPELNAKLM 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
A+ IA++LE+R +R A K A+++A++ GA GVK I GRLNG E++R E Y EG + L
Sbjct: 121 AELIAEKLEQRKSYRIAQKFAIRTALKNGATGVKTIVCGRLNGVEMARCEGYAEGEMKLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
TLR +++Y TA+A+T YG G+KV+VSL + +D +
Sbjct: 181 TLRQNVEYATAIAKTTYGILGVKVWVSLGEIKEKTDIDSIIRADKR 226
>gi|161611229|ref|YP_287585.2| 30S ribosomal protein S3 [Mycoplasma hyopneumoniae 7448]
gi|152060878|sp|Q4A8H7|RS3_MYCH7 RecName: Full=30S ribosomal protein S3
gi|144575313|gb|AAZ53562.2| 30S ribosomal protein S3 [Mycoplasma hyopneumoniae 7448]
Length = 227
Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats.
Identities = 82/226 (36%), Positives = 135/226 (59%), Gaps = 4/226 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP FR G+ N+ W+A +++ L ED+KI + + ++ + +I R
Sbjct: 1 MGQKVNPNGFRFGITRNHNAIWYADKNKFSINLLEDVKIHRFFEKLTREYQIGNTVIRRD 60
Query: 61 HKN-CRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE---IHLSVNEVPKPEINATLI 116
N ++VY+A+ G +G G +++KI +KL + I++ ++ PE+NA L+
Sbjct: 61 RNNAITVLVYTAKLGSFLGASGENLKKIVEKLRKTLKNRKIVINVDAVDIQSPELNAKLM 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
A+ IA++LE+R +R A K A+++A++ GA GVK I GRLNG E++R E Y EG + L
Sbjct: 121 AELIAEKLEQRKSYRIAQKFAIRTALKNGATGVKTIVCGRLNGVEMARCEGYAEGEMKLH 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
TLR +++Y TA+A+T YG G+KV+VSL + +D +
Sbjct: 181 TLRQNVEYATAIAKTTYGILGVKVWVSLGEIKEKNDIDAIIRADKR 226
>gi|255321767|ref|ZP_05362922.1| ribosomal protein S3 [Campylobacter showae RM3277]
gi|255301247|gb|EET80509.1| ribosomal protein S3 [Campylobacter showae RM3277]
Length = 205
Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats.
Identities = 93/196 (47%), Positives = 134/196 (68%)
Query: 30 GALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRK 89
+ ED KIR +L+ L AGV++ILIERT K R+ V +ARPG+IIGKKG+D+EK+++
Sbjct: 2 AENIGEDYKIRAFLKKKLYYAGVSQILIERTAKKIRVTVVAARPGIIIGKKGSDVEKLKE 61
Query: 90 KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGV 149
+ + N E+++++ E K + +A L A+++A QLE+RV FRRAMK+ +Q A + GA G+
Sbjct: 62 DIQKLINKEVNVNIKEERKAQASAQLAAENVAMQLEKRVAFRRAMKKVIQGAQKSGAKGI 121
Query: 150 KVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVS 209
K+ +GRL GAE++RTE YLEGRVPL TLRA IDYG A A T YG+ GIKV++ + +
Sbjct: 122 KISVAGRLGGAEIARTEWYLEGRVPLHTLRAKIDYGVAEAHTTYGNIGIKVWIFKGEVLQ 181
Query: 210 DSDSTIPAAEHRVVEK 225
E + +K
Sbjct: 182 KGVQPEKNEEEKADKK 197
>gi|197131498|gb|ACH47267.1| ribosomal protein S3 [Geranium carolinianum]
Length = 232
Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats.
Identities = 70/231 (30%), Positives = 122/231 (52%), Gaps = 24/231 (10%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WF + Y L ED KIR+ ++ ++
Sbjct: 1 MGQKINPLGFRLGTTQNHHSIWFEKPKNYCKSLQEDQKIRDRIKNYIDNHRVSYGTKQRI 60
Query: 52 -----------VAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK---IRKKLSNMTNS 97
+++I IE+ ++I+Y P +I K I++ +K+ + N
Sbjct: 61 LDIDIEIETDYISRIQIEKVRDFVQVIIYMGLPTFLIEGKPHKIKELKGDVEKVLHCGNR 120
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGA-DGVKVIASGR 156
++ +S++++ P ++ ++A +A QL+ RV FR+AMK+ ++ A + G G+KV +GR
Sbjct: 121 KLTISISKIGNPFVDPNILAAILAHQLKNRVSFRKAMKKTIEVAEKKGFAKGIKVQLAGR 180
Query: 157 LNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
+ G E++ E +GRV LQT+R ID+ + T +G GIK++V +
Sbjct: 181 IEGREMAGVEWLRKGRVSLQTIRTKIDFCSTTVRTIHGVLGIKIWVFANGK 231
>gi|119953273|ref|YP_945482.1| 30S ribosomal protein S3 [Borrelia turicatae 91E135]
gi|254764514|sp|A1QZS0|RS3_BORT9 RecName: Full=30S ribosomal protein S3
gi|119862044|gb|AAX17812.1| SSU ribosomal protein S3P [Borrelia turicatae 91E135]
Length = 276
Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats.
Identities = 84/232 (36%), Positives = 131/232 (56%), Gaps = 5/232 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+ +N W S+W+ Y +LHED IR LK IE
Sbjct: 1 MGQKVHPYSLRIKINRDWKSKWYFDKKLYSEILHEDFLIRRETMKFLKGIRFDISDIEII 60
Query: 61 HKNCR---IIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117
N + +I+ + RPG +IG KG ++EKI + L+ + +I++ + E+ KPE +A ++A
Sbjct: 61 RNNLQRVTVIISTPRPGSVIGVKGANLEKIGQLLTRKISKKINIKIKEIKKPEFDAQIVA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
IA+QLE R +R+ +K ++ S++ G GVK+ SGRL GAE++R+ EGR+PL T
Sbjct: 121 NGIAKQLENRASYRKLLKSSLLSSISKGVQGVKIKVSGRLGGAEIARSFEVKEGRIPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS--DSTIPAAEHRVVEKDS 227
LRA+IDYG A A+T YG G+KV++ + + + + S
Sbjct: 181 LRANIDYGFAEAQTTYGVIGVKVWLFKGEVLGKQTNSDAGQVINKKTSREKS 232
>gi|121511581|gb|ABM55282.1| ribosomal protein S3 [Illinois elm yellows phytoplasma]
Length = 250
Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats.
Identities = 80/215 (37%), Positives = 124/215 (57%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+A + +L+ ED +IR ++ H +A +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYAEDKQVPSLVCEDFQIRNLIKNHYPKATISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y+++ GLI G + + K+ + +I +++ EV A L+
Sbjct: 61 KKSNDEVIEIELYTSKIGLIQGPDNKNKNSLVSKIEKLIKKKIQINIFEVKAVNKIAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R ++ K AVQ A+R G G+K+I +GRL GAE +R E G VPL
Sbjct: 121 AQNIAIQLQQRAFYKAVQKSAVQKALRSGVKGIKIIITGRLGGAEKARQESISMGVVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG G+KV ++ + + +
Sbjct: 181 TLRADIDYACEEAHTTYGVLGVKVIINHGEVLPNK 215
>gi|187918350|ref|YP_001883913.1| 30S ribosomal protein S3 [Borrelia hermsii DAH]
gi|226697668|sp|B2S0I7|RS3_BORHD RecName: Full=30S ribosomal protein S3
gi|119861198|gb|AAX16993.1| SSU ribosomal protein S3P [Borrelia hermsii DAH]
Length = 276
Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats.
Identities = 84/232 (36%), Positives = 130/232 (56%), Gaps = 5/232 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+ +N W S+W+ Y +LHED IR K IE
Sbjct: 1 MGQKVHPYSLRIKINRDWKSKWYFDKKLYSEILHEDFLIRRETMKFFKGIRFDISDIEII 60
Query: 61 HKNCR---IIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117
N + ++V + RPG +IG KG ++EKI + L+ + +I++ + E+ KPE +A ++A
Sbjct: 61 RNNLQRVTVVVSTPRPGSVIGVKGANLEKIGQLLTRKISKKINIKIKEIKKPEFDAQIVA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
IA+QLE R +R+ +K ++ S++ G GVK+ SGRL GAE++R+ EGRVPL T
Sbjct: 121 NGIAKQLENRASYRKLLKSSLLSSISKGVQGVKIKVSGRLGGAEIARSFEVKEGRVPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS--DSTIPAAEHRVVEKDS 227
LRA+IDYG A A+T YG G+KV++ + + + + S
Sbjct: 181 LRANIDYGFAEAQTTYGVIGVKVWLFKGEVLGKQTNSDAGQVINRKSSREKS 232
>gi|225550883|ref|ZP_03771832.1| ribosomal protein S3 [Ureaplasma urealyticum serovar 2 str. ATCC
27814]
gi|225380037|gb|EEH02399.1| ribosomal protein S3 [Ureaplasma urealyticum serovar 2 str. ATCC
27814]
Length = 257
Score = 194 bits (493), Expect = 8e-48, Method: Composition-based stats.
Identities = 81/214 (37%), Positives = 121/214 (56%), Gaps = 3/214 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGS-EYGALLHEDLKIREYLQCHLKQAGVAKILIER 59
MGQK+NP R G+N W SRW + L ED KIR+YL K AG+ + IER
Sbjct: 1 MGQKVNPNGLRFGINKQWLSRWVPTDQLQMAKWLVEDDKIRKYLSTKYKNAGIDHVEIER 60
Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE--IHLSVNEVPKPEINATLIA 117
+ + VY+ + GL+IG + ++ + I ++ + + + L V EV PE+ A+L+A
Sbjct: 61 DQQRVNVYVYAVQSGLLIGTEASEKKLIELAINKIVGRKQLVSLKVVEVQIPELQASLMA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ IA +E RV FR A K ++ ++ GA G+K SGRL G E++R E Y +G + L T
Sbjct: 121 REIADAIENRVSFRIAQKMVIKKVLKAGARGIKTHVSGRLGGVEMAREEGYTQGVMTLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
LRA IDY A T YG G+KV+++ + +
Sbjct: 181 LRADIDYSMQEAHTTYGIIGVKVWINRGELFGNK 214
>gi|290790874|gb|ADD63130.1| ribosomal protein S3 [Microlaena stipoides]
Length = 239
Score = 194 bits (493), Expect = 9e-48, Method: Composition-based stats.
Identities = 74/239 (30%), Positives = 118/239 (49%), Gaps = 32/239 (13%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60
Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88
+ I I++ +I++ P L+ K ++EK
Sbjct: 61 SDSSSEVITHNRKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG 148
+K N N +++ + +V +P ++A+ IA QL+ RV FR+AMK+A++ + G
Sbjct: 121 QKEINSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKG 180
Query: 149 VKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
VKV +GRL EC +GR+PLQT+RA IDY T YG G+K+++ + +E
Sbjct: 181 VKVKIAGRLAXXXXXXAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLGVKIWIFVDEE 239
>gi|284006157|emb|CBA71399.1| 30S ribosomal protein S3 [Arsenophonus nasoniae]
Length = 194
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 94/193 (48%), Positives = 133/193 (68%), Gaps = 8/193 (4%)
Query: 43 LQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLS 102
+ L +A +++I+IER K+ R+ +++ARPG++IGKKG D+EK+RK ++++ ++
Sbjct: 1 MNKELAKASISRIVIERPAKSIRVTIHTARPGIVIGKKGEDVEKLRKIVADIAGVPAQIN 60
Query: 103 VNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAEL 162
+ EV KPE++A L+A SIA QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE+
Sbjct: 61 IAEVRKPELDAKLVADSIASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEI 120
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVS--------DSDST 214
+RTE Y EGRVPL TLRA IDY TA A T YG G+KV++ + + + +
Sbjct: 121 ARTEWYREGRVPLHTLRADIDYNTAEAHTTYGVLGVKVWIFKGEILGGMAAVEQVEKPTV 180
Query: 215 IPAAEHRVVEKDS 227
P + R K+S
Sbjct: 181 QPKKQQRKGRKES 193
>gi|13507910|ref|NP_109859.1| 30S ribosomal protein S3 [Mycoplasma pneumoniae M129]
gi|2507322|sp|P41205|RS3_MYCPN RecName: Full=30S ribosomal protein S3
gi|1674365|gb|AAB96308.1| ribosomal protein S3 [Mycoplasma pneumoniae M129]
gi|301633309|gb|ADK86863.1| ribosomal protein S3 [Mycoplasma pneumoniae FH]
Length = 273
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 84/234 (35%), Positives = 137/234 (58%), Gaps = 7/234 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARG-SEYGALLHEDLKIREYLQCHLKQAGVAKILIER 59
MGQK+N R G+N W SRW A ++ L ED KIR + + A V+ + IER
Sbjct: 1 MGQKVNSNGLRFGINKNWISRWTANSHAQTAKWLIEDEKIRNLFFVNYRNAQVSNVEIER 60
Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATLIA 117
T + VY+A+P +IG + +I+KI K++ + + L++NE+ P ++A +IA
Sbjct: 61 TQATVDVFVYAAQPAFLIGSENKNIQKITKQIKQIIGRTTNLDLTINEIGSPMLSARIIA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ +A +E RV R AM++++ ++ GA+G+KV+ SGRLNGAE++R + Y+EG +PL T
Sbjct: 121 RDLANAIEARVPLRTAMRQSLIKVLKAGANGIKVLVSGRLNGAEIARDKMYIEGNMPLST 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA----AEHRVVEKDS 227
LRA IDY A+T YG G+KV+++ + + PA + + + +
Sbjct: 181 LRADIDYALEKAQTTYGVIGVKVWINRGMIYTKGLNRTPAHILHPQKKQPNRQN 234
>gi|13357797|ref|NP_078071.1| ribosomal protein S3 [Ureaplasma parvum serovar 3 str. ATCC 700970]
gi|170762418|ref|YP_001752320.1| ribosomal protein S3 [Ureaplasma parvum serovar 3 str. ATCC 27815]
gi|171920204|ref|ZP_02691213.2| ribosomal protein S3 [Ureaplasma parvum serovar 1 str. ATCC 27813]
gi|171920752|ref|ZP_02931956.1| ribosomal protein S3 [Ureaplasma urealyticum serovar 13 str. ATCC
33698]
gi|183508764|ref|ZP_02690051.2| ribosomal protein S3 [Ureaplasma parvum serovar 14 str. ATCC 33697]
gi|185179052|ref|ZP_02555336.2| ribosomal protein S3 [Ureaplasma urealyticum serovar 5 str. ATCC
27817]
gi|186701910|ref|ZP_02554273.2| ribosomal protein S3 [Ureaplasma parvum serovar 6 str. ATCC 27818]
gi|188024278|ref|ZP_02570143.2| ribosomal protein S3 [Ureaplasma urealyticum serovar 7 str. ATCC
27819]
gi|188518681|ref|ZP_02557141.2| ribosomal protein S3 [Ureaplasma urealyticum serovar 11 str. ATCC
33695]
gi|188524435|ref|ZP_02558251.2| ribosomal protein S3 [Ureaplasma urealyticum serovar 12 str. ATCC
33696]
gi|195867628|ref|ZP_03079630.1| ribosomal protein S3 [Ureaplasma urealyticum serovar 9 str. ATCC
33175]
gi|198273729|ref|ZP_03206264.1| ribosomal protein S3 [Ureaplasma urealyticum serovar 4 str. ATCC
27816]
gi|209554200|ref|YP_002284636.1| ribosomal protein S3 [Ureaplasma urealyticum serovar 10 str. ATCC
33699]
gi|225551476|ref|ZP_03772422.1| ribosomal protein S3 [Ureaplasma urealyticum serovar 8 str. ATCC
27618]
gi|27734541|sp|Q9PQQ4|RS3_UREPA RecName: Full=30S ribosomal protein S3
gi|189045344|sp|B1AIM6|RS3_UREP2 RecName: Full=30S ribosomal protein S3
gi|226697773|sp|B5ZB46|RS3_UREU1 RecName: Full=30S ribosomal protein S3
gi|11275283|pir||F82915 ribosomal protein S3 UU237 [imported] - Ureaplasma urealyticum
gi|6899207|gb|AAF30646.1|AE002122_15 ribosomal protein S3 [Ureaplasma parvum serovar 3 str. ATCC 700970]
gi|168827995|gb|ACA33257.1| ribosomal protein S3 [Ureaplasma parvum serovar 3 str. ATCC 27815]
gi|171902588|gb|EDT48877.1| ribosomal protein S3 [Ureaplasma parvum serovar 1 str. ATCC 27813]
gi|171903502|gb|EDT49791.1| ribosomal protein S3 [Ureaplasma urealyticum serovar 13 str. ATCC
33698]
gi|182675701|gb|EDT87606.1| ribosomal protein S3 [Ureaplasma parvum serovar 14 str. ATCC 33697]
gi|184209037|gb|EDU06080.1| ribosomal protein S3 [Ureaplasma urealyticum serovar 5 str. ATCC
27817]
gi|186700646|gb|EDU18928.1| ribosomal protein S3 [Ureaplasma parvum serovar 6 str. ATCC 27818]
gi|188018947|gb|EDU56987.1| ribosomal protein S3 [Ureaplasma urealyticum serovar 7 str. ATCC
27819]
gi|188997748|gb|EDU66845.1| ribosomal protein S3 [Ureaplasma urealyticum serovar 11 str. ATCC
33695]
gi|195659631|gb|EDX53011.1| ribosomal protein S3 [Ureaplasma urealyticum serovar 12 str. ATCC
33696]
gi|195660685|gb|EDX53940.1| ribosomal protein S3 [Ureaplasma urealyticum serovar 9 str. ATCC
33175]
gi|198249757|gb|EDY74538.1| ribosomal protein S3 [Ureaplasma urealyticum serovar 4 str. ATCC
27816]
gi|209541701|gb|ACI59930.1| ribosomal protein S3 [Ureaplasma urealyticum serovar 10 str. ATCC
33699]
gi|225379291|gb|EEH01656.1| ribosomal protein S3 [Ureaplasma urealyticum serovar 8 str. ATCC
27618]
Length = 257
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 81/214 (37%), Positives = 121/214 (56%), Gaps = 3/214 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGS-EYGALLHEDLKIREYLQCHLKQAGVAKILIER 59
MGQK+NP R G+N W SRW + L ED KIR+YL K AG+ + IER
Sbjct: 1 MGQKVNPNGLRFGINKQWLSRWVPTDQLQMAKWLVEDDKIRKYLSTKYKNAGIDHVEIER 60
Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE--IHLSVNEVPKPEINATLIA 117
+ + VY+ + GL+IG + ++ + I ++ + + + L V EV PE+ A+L+A
Sbjct: 61 DQQRVNVYVYAVQSGLLIGTEASEKKLIELAINKIVGRKQLVSLKVVEVQIPELQASLMA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ IA +E RV FR A K ++ ++ GA G+K SGRL G E++R E Y +G + L T
Sbjct: 121 REIADAIENRVSFRIAQKMVIKKVLKAGARGIKTHVSGRLGGVEMAREEGYTQGVMTLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
LRA IDY A T YG G+KV+++ + +
Sbjct: 181 LRADIDYSMQEAHTTYGIIGVKVWINRGELFGNK 214
>gi|295137042|ref|YP_003587589.1| ribosomal protein S3 [Pisum sativum]
gi|293338614|gb|ADE43587.1| ribosomal protein S3 [Pisum sativum]
Length = 225
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 69/223 (30%), Positives = 119/223 (53%), Gaps = 18/223 (8%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ----------- 49
MGQKI+P+ FRLG + +S WFA+ Y + ED IR + ++
Sbjct: 1 MGQKIHPLGFRLGATQSHDSIWFAQPIIYSKNIKEDKMIRYCIVHYILNTINGSLEFDVD 60
Query: 50 ---AGVAKILIERTHKNCRIIVYSARPGLIIGK----KGTDIEKIRKKLSNMTNSEIHLS 102
G+ +I I++ ++I+Y P L+ + + +++ +K N N +I L
Sbjct: 61 ISGYGIGRIKIQKRIDRIKVIIYMGLPNLLKEEVKAQRIEELKTHVQKKVNCVNRKIKLG 120
Query: 103 VNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAEL 162
+ ++ + ++AQ IAQ L R+ FR+AM++ ++ + GV++ +GR++G E+
Sbjct: 121 ITKIANIYRDPHILAQFIAQLLLNRISFRKAMQKGIELVEQADTKGVQIQIAGRIDGKEI 180
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+R E EGRVPLQT+RA IDY + T +G GIK+++ L
Sbjct: 181 ARVEWIREGRVPLQTIRAKIDYCSYPVVTIWGVFGIKIWIFLN 223
>gi|197131500|gb|ACH47268.1| ribosomal protein S3 [Geranium macrorrhizum]
Length = 230
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 70/229 (30%), Positives = 122/229 (53%), Gaps = 22/229 (9%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MG+ INP+ FRLG +S WF + +Y L ED KIR+ ++ ++
Sbjct: 1 MGRTINPLGFRLGTTQNHHSIWFEQPKKYCQGLQEDAKIRDRVKNYIDNHRVPRIFSRTY 60
Query: 52 ----------VAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK---IRKKLSNMTNSE 98
+++I IE+ +I+Y P +I K + I++ +K+ + N E
Sbjct: 61 FISRIEIPDCISRIEIEKGKGFVNVIIYMGFPRFLIEGKPSKIKELEVDVEKVLHCGNRE 120
Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLN 158
+ +S+ E+ P + ++A+ + QL+ RV FR+AMK+ ++ A + A G+KV +GR++
Sbjct: 121 LTISIREIGNPYRDPNILAEFLTDQLKNRVSFRKAMKKTIELAEKAYAKGIKVQIAGRID 180
Query: 159 GAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
G E++ E +GRVPLQT+R I++ + T +G GIK++V E
Sbjct: 181 GKEMACVEWLRKGRVPLQTIRTKINFCSTTVRTIHGVLGIKIWVFTNRE 229
>gi|290487102|gb|ADD29935.1| ribosomal protein S3 [Phoradendron serotinum]
Length = 222
Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 71/222 (31%), Positives = 122/222 (54%), Gaps = 15/222 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA-------GVA 53
MG+KINP+ FRL S WFA+ Y L ED KIR+ +Q G+A
Sbjct: 1 MGKKINPLGFRLDTTHDHYSVWFAQAKNYSQGLQEDKKIRDSIQYVKNNMNISSSGVGIA 60
Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKG------TDIEKIRKKLSNMTNSEIHLSVNEVP 107
I I++ ++ +Y + ++G ++E KK + N ++++++ +
Sbjct: 61 HINIQKRIDLVQVNIYMGFTTKFLVREGSRLRIIDNLEMTIKKQLSYVNRKVNIAITRIA 120
Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG--ADGVKVIASGRLNGAELSRT 165
KP + ++A IA+QL+ RV FR+AMK+A++ + G+++ +GR++G E++R
Sbjct: 121 KPYGDPNILAAFIAEQLKNRVSFRKAMKKAIELTEQQAGTNKGIQIQIAGRMDGKEIARV 180
Query: 166 ECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
E EG+VPLQ++RA I+YG+ T YG GIK+++ +E
Sbjct: 181 EWIREGKVPLQSIRAKINYGSYPIRTLYGLLGIKIWIFTEEE 222
>gi|197131508|gb|ACH47272.1| ribosomal protein S3 [Pelargonium cotyledonis]
Length = 218
Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats.
Identities = 70/218 (32%), Positives = 124/218 (56%), Gaps = 15/218 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG-------VA 53
MGQKINP+ FRLG T +S WF +Y L ED KIRE+++ ++++ ++
Sbjct: 1 MGQKINPLGFRLGTTQTHHSIWFEERKDYSEGLQEDHKIREHIKNYIEKERISSGTDVIS 60
Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKGTDIE------KIRKKLSNMTNSEIHLSVNEVP 107
+I I++ ++I+Y L+ + + ++K + + N +++++V ++
Sbjct: 61 RIQIDKRIDVVKVIIYMGFSNLLTEDEPPKTKIKELQVSLKKAIHFIHNRKLNIAVRKMK 120
Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGA--ELSRT 165
KP + T++ + IA QL+ RV FR+AMK+AV+ + G++V +G + G E++R
Sbjct: 121 KPYGDPTILGEFIADQLKNRVSFRKAMKKAVELVEKEYKKGIQVQIAGCIGGKAQEMARV 180
Query: 166 ECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
E +GRVPLQT+ A I +G+ T +G GIKV++
Sbjct: 181 EWLRKGRVPLQTVTAKIHFGSTQVLTIHGVLGIKVWIF 218
>gi|12045010|ref|NP_072820.1| 30S ribosomal protein S3 [Mycoplasma genitalium G37]
gi|255660305|ref|ZP_05405714.1| 30S ribosomal protein S3 [Mycoplasma genitalium G37]
gi|1350991|sp|P47403|RS3_MYCGE RecName: Full=30S ribosomal protein S3
gi|3844751|gb|AAC71375.1| ribosomal protein S3 [Mycoplasma genitalium G37]
gi|166078850|gb|ABY79468.1| ribosomal protein S3 [synthetic Mycoplasma genitalium JCVI-1.0]
Length = 268
Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats.
Identities = 83/208 (39%), Positives = 128/208 (61%), Gaps = 3/208 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEY-GALLHEDLKIREYLQCHLKQAGVAKILIER 59
MGQK+N R G+N W SRW A ++ L +D KIR + + A V+ + IER
Sbjct: 1 MGQKVNSNGLRFGINKNWISRWTASSNQQTATWLVQDEKIRNLFFINYRNAQVSNVEIER 60
Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVN--EVPKPEINATLIA 117
T + VY+A+P L+IG + +I+KI K + + +I L + E+ P +++ +IA
Sbjct: 61 TQTTVDVYVYAAQPALLIGSENKNIQKITKMIQIIVGRKIKLDLTINEIGSPMLSSRIIA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ IA +E RV R AM++A+ ++ GA+G+KV+ SGRLNGAE++R + Y+EG +PL T
Sbjct: 121 RDIANAIENRVPLRSAMRQALTKVLKAGANGIKVLVSGRLNGAEIARDKMYIEGNMPLST 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLR 205
LRA IDY A+T YG G+KV+++
Sbjct: 181 LRADIDYAFEKAKTTYGIIGVKVWINRG 208
>gi|31075915|gb|AAP42399.1| ribosomal protein S3 [Cherry lethal yellows phytoplasma]
Length = 250
Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats.
Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+
Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL
Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGVKGIKIIITGRLGGAEKARRDSISMGVVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG G+KV ++ + + +
Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215
>gi|309322141|ref|YP_003934056.1| ribosomal protein S3 [Geranium palmatum]
gi|197131502|gb|ACH47269.1| ribosomal protein S3 [Geranium palmatum]
gi|300069234|gb|ADJ66355.1| ribosomal protein S3 [Geranium palmatum]
Length = 230
Score = 191 bits (485), Expect = 7e-47, Method: Composition-based stats.
Identities = 70/229 (30%), Positives = 121/229 (52%), Gaps = 22/229 (9%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MG+ INP+ FRLG +S WF + +Y L ED KIR+ ++ ++
Sbjct: 1 MGRTINPLGFRLGTTQNHHSIWFEQPKKYCQGLQEDAKIRDRIKNYINNHRVPRIFSRTY 60
Query: 52 ----------VAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK---IRKKLSNMTNSE 98
+++I IE+ +I+Y P +I K + I++ KK+ + N E
Sbjct: 61 LISRIEIPDCISRIEIEKGKGFVNVIIYMGFPRFLIEGKPSKIKELKLDVKKVLHCGNRE 120
Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLN 158
+ +S+ E+ P + ++A+ +A QL+ RV FR+AMK+ ++ A + A G+KV +GR++
Sbjct: 121 LTISIREIVNPYSDPNILAEFLADQLKNRVSFRKAMKKTIELAEKAYAKGIKVQIAGRID 180
Query: 159 GAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
G E++ + +GRVPLQT+ I + + T +G GIK++V E
Sbjct: 181 GKEMACVKWLRKGRVPLQTICTKIHFCSTTVRTIHGVLGIKIWVFTNRE 229
>gi|323388309|gb|ADX60454.1| ribosomal protein S3 [Jujube witches'-broom phytoplasma]
Length = 250
Score = 191 bits (485), Expect = 7e-47, Method: Composition-based stats.
Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+
Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL
Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGVKGIKIIITGRLGGAEKARRDSISMGVVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG G+KV ++ + + +
Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215
>gi|33242927|gb|AAQ01168.1| ribosomal protein S3 [Peach yellows phytoplasma]
Length = 250
Score = 191 bits (485), Expect = 7e-47, Method: Composition-based stats.
Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+
Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL
Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGVKGIKIIITGRLGGAEKARRDSISMGVVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG G+KV ++ + + +
Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215
>gi|295065766|ref|YP_003587706.1| ribosomal protein S3 [Anomochloa marantoidea]
gi|251765290|gb|ACT15444.1| ribosomal protein S3 [Anomochloa marantoidea]
Length = 237
Score = 191 bits (485), Expect = 7e-47, Method: Composition-based stats.
Identities = 77/237 (32%), Positives = 120/237 (50%), Gaps = 30/237 (12%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
M QKINP+ FRLG +S WFA+ Y L ED KIR ++ +++
Sbjct: 1 MAQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDQKIRNCIENYIQIQKNRKKIQKNE 60
Query: 52 --------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKK 90
+ I I++ +I++ P L+ K ++EK +K
Sbjct: 61 KKASNKKSNRKIDAGSSSEVITHIEIQKEIDMIHVIIHIGFPHLLKKKGAIEELEKNLQK 120
Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVK 150
N N +H+++ +V P ++A+ IA QL+ RV FR+AMK+AV+ + GVK
Sbjct: 121 EVNSVNQRLHIAIEKVKNPYRQPNILAEYIAFQLKNRVAFRKAMKKAVELTKKADTKGVK 180
Query: 151 VIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
V +GRL G E++R EC +G +PLQT+RA IDY T YG G+K+++ + +E
Sbjct: 181 VKIAGRLGGQEIARAECTQKGPLPLQTIRAKIDYCCYPIRTIYGVLGLKIWLFVDEE 237
>gi|202070812|gb|ACH95359.1| ribosomal protein S3 [Jujube witches'-broom phytoplasma]
Length = 250
Score = 190 bits (484), Expect = 8e-47, Method: Composition-based stats.
Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+
Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL
Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGVKGIKIIITGRLGGAEKARRDSISMGVVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG G+KV ++ + + +
Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215
>gi|202070788|gb|ACH95341.1| ribosomal protein S3 [Jujube witches'-broom phytoplasma]
Length = 250
Score = 190 bits (484), Expect = 8e-47, Method: Composition-based stats.
Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+
Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL
Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGVKGIKIIITGRLGGAEKARRDSISMGVVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG G+KV ++ + + +
Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215
>gi|31075919|gb|AAP42402.1| ribosomal protein S3 [Peach yellows phytoplasma]
gi|31075923|gb|AAP42405.1| ribosomal protein S3 [Jujube witches'-broom phytoplasma]
gi|33242931|gb|AAQ01171.1| ribosomal protein S3 [Nectarine yellows phytoplasma]
gi|117169119|gb|ABK32517.1| ribosomal protein S3 [Hemp fiber witches'-broom phytoplasma]
gi|151413289|gb|ABS11145.1| ribosomal protein S3 [Jujube witches'-broom phytoplasma]
gi|202070784|gb|ACH95338.1| ribosomal protein S3 [Jujube witches'-broom phytoplasma]
gi|202070792|gb|ACH95344.1| ribosomal protein S3 [Jujube witches'-broom phytoplasma]
gi|202070796|gb|ACH95347.1| ribosomal protein S3 [Jujube witches'-broom phytoplasma]
gi|202070800|gb|ACH95350.1| ribosomal protein S3 [Jujube witches'-broom phytoplasma]
gi|202070804|gb|ACH95353.1| ribosomal protein S3 [Jujube witches'-broom phytoplasma]
gi|202070808|gb|ACH95356.1| ribosomal protein S3 [Jujube witches'-broom phytoplasma]
gi|202070816|gb|ACH95362.1| ribosomal protein S3 [Jujube witches'-broom phytoplasma]
gi|229484942|gb|ACQ73425.1| ribosomal protein S3 [Jujube witches'-broom phytoplasma]
gi|269979215|gb|ACZ56123.1| ribosomal protein S3 [Jujube witches'-broom phytoplasma]
gi|296280786|gb|ADH04688.1| ribosomal protein S3 [Japanese raisin witches'-broom phytoplasma]
gi|300390821|gb|ADK11105.1| ribosomal protein S3 [Jujube witches'-broom phytoplasma]
Length = 250
Score = 190 bits (484), Expect = 9e-47, Method: Composition-based stats.
Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+
Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL
Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGVKGIKIIITGRLGGAEKARRDSISMGVVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG G+KV ++ + + +
Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215
>gi|202070820|gb|ACH95365.1| ribosomal protein S3 [Jujube witches'-broom phytoplasma]
Length = 250
Score = 190 bits (484), Expect = 9e-47, Method: Composition-based stats.
Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+
Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL
Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGVKGIKIIITGRLGGAEKARRDSISMGVVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG G+KV ++ + + +
Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215
>gi|290487104|gb|ADD29936.1| ribosomal protein S3 [Rhododendron simsii]
Length = 216
Score = 190 bits (484), Expect = 9e-47, Method: Composition-based stats.
Identities = 77/216 (35%), Positives = 122/216 (56%), Gaps = 13/216 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ----------- 49
MGQKINP+ FRLG +S WF + Y L ED IR+Y++ +++
Sbjct: 1 MGQKINPLGFRLGTTQNHHSCWFEQPKNYSEGLIEDQNIRDYIEDFVQENIQKNRRIASS 60
Query: 50 -AGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIE-KIRKKLSNMTNSEIHLSVNEVP 107
+G+ +I I + + + A P L+ +++ ++KK+ + N +I+++ +
Sbjct: 61 LSGITRIKILKGTDLTEVQISLAFPKLLKEIPMEELQTNLQKKIDCLLNRKINIATTTIA 120
Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTEC 167
KP N ++AQ IA QLE RV FR+AMKRA+ A + G++V +GRL G +++R E
Sbjct: 121 KPYRNPIILAQYIAGQLEHRVPFRKAMKRAIAKAKKEKIKGIRVQIAGRLGGRDIARVEW 180
Query: 168 YLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
+GRVPLQT+RA IDY + T YG GIK+++
Sbjct: 181 IRKGRVPLQTIRAKIDYCSYPVRTIYGVLGIKIWIF 216
>gi|94502240|ref|ZP_01308726.1| 30S ribosomal protein S3 [Candidatus Sulcia muelleri str. Hc
(Homalodisca coagulata)]
gi|161833825|ref|YP_001598021.1| 30S ribosomal subunit protein S3 [Candidatus Sulcia muelleri GWSS]
gi|172048396|sp|A8Z674|RS3_SULMW RecName: Full=30S ribosomal protein S3
gi|94451211|gb|EAT14150.1| 30S ribosomal protein S3 [Candidatus Sulcia muelleri str. Hc
(Homalodisca coagulata)]
gi|152206315|gb|ABS30625.1| 30S ribosomal subunit protein S3 [Candidatus Sulcia muelleri GWSS]
Length = 226
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 87/212 (41%), Positives = 138/212 (65%), Gaps = 3/212 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+N + RLG+ W S W++ Y + ED KIR+YL+ L +A +++I IER+
Sbjct: 1 MGHKVNTLSNRLGLIVGWQSLWYSH---YPERIKEDFKIRKYLENRLSKANISRIYIERS 57
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + S+RP +IIGK G++I+K++K+L+ +I +++ E+ KPE++A L+++SI
Sbjct: 58 LNRVIITISSSRPSIIIGKGGSEIDKLKKELNIFIYKKIQINIFEIKKPELDAVLVSKSI 117
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE R +++A+K + +A++ A+G+K+ SGRLNGAE++R E Y EGR+PL T RA
Sbjct: 118 ASQLENRGSYKKAIKICISAALQVNAEGIKIKISGRLNGAEMARKETYKEGRIPLSTFRA 177
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
IDY A T YG GIKV++ + +
Sbjct: 178 DIDYHMTEAHTNYGIIGIKVWIMKGEIYGKKN 209
>gi|309322213|ref|YP_003934291.1| ribosomal protein S3 [Monsonia speciosa]
gi|197131504|gb|ACH47270.1| ribosomal protein S3 [Monsonia speciosa]
gi|300069306|gb|ADJ66426.1| ribosomal protein S3 [Monsonia speciosa]
Length = 266
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 76/263 (28%), Positives = 118/263 (44%), Gaps = 55/263 (20%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVA------- 53
MGQKINP+ FRLG +S WF + Y L ED KIR+ ++ ++
Sbjct: 1 MGQKINPLGFRLGTTQNHHSVWFEKPKNYCESLKEDKKIRDRIKNYIDNRRSGPMKDLIT 60
Query: 54 KILIERTHKNCRIIVYSARPGLIIGKK--------------------------------- 80
+I IE+ ++I+Y L +G K
Sbjct: 61 RIQIEKGMDLIKVIIYMGFQELFMGDKPAKTKKGKRKRGQKGKKEGEPRHIKELRVRELK 120
Query: 81 ---------------GTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLE 125
G + K LS N ++ + + + P + ++A+ +A QL+
Sbjct: 121 VNVAKALHLNLSGNRGLKKLNVEKGLSQSGNRQLKVVIRNISNPYGDPNILAEFLADQLK 180
Query: 126 RRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYG 185
R+ FR+AMKR ++ A GVKV +GRL G +++R EC L+GRVPL T+RA ID+
Sbjct: 181 NRISFRKAMKRVIELAKEANTKGVKVQIAGRLGGRDIARVECLLQGRVPLHTIRAKIDFC 240
Query: 186 TAVAETAYGSCGIKVYVSLRDEV 208
+ + YG GIK+++ EV
Sbjct: 241 STRVQMLYGVLGIKIWIFSDTEV 263
>gi|115531946|ref|YP_784101.1| ribosomal protein S3 [Pelargonium x hortorum]
gi|115532000|ref|YP_784155.1| ribosomal protein S3 [Pelargonium x hortorum]
gi|122164242|sp|Q06FM6|RR3_PELHO RecName: Full=30S ribosomal protein S3, chloroplastic
gi|112382100|gb|ABI17293.1| ribosomal protein S3 [Pelargonium x hortorum]
gi|112382154|gb|ABI17347.1| ribosomal protein S3 [Pelargonium x hortorum]
Length = 218
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 71/218 (32%), Positives = 124/218 (56%), Gaps = 15/218 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG-------VA 53
MGQKINP+ FRLG T +S WF + +Y L ED KIRE++Q ++++ ++
Sbjct: 1 MGQKINPLGFRLGTTQTHHSIWFEKRKDYSEGLQEDHKIREHIQNYIEKERISSDSDVIS 60
Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKGTDIE------KIRKKLSNMTNSEIHLSVNEVP 107
+I I+++ ++I+Y L+ + + ++K + + N +++L+V ++
Sbjct: 61 RIQIDKSIDVVKVIIYMGFSQLLTEDEPPKTKIKELQVSLKKAIHFIQNRKLNLAVRKMK 120
Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGA--ELSRT 165
KP + T++ + IA QL+ RV FR+ MK+AV+ + G++V +G + G E++R
Sbjct: 121 KPYGDPTILGKYIANQLKNRVSFRKVMKKAVELVEKAYKKGIQVQIAGCIGGKAQEMARV 180
Query: 166 ECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
E +GRVPLQT+ A ID+ + T G GIKV++
Sbjct: 181 EWLRKGRVPLQTVTAKIDFCSTQVITIRGVLGIKVWIF 218
>gi|317134113|ref|YP_004123456.1| ribosomal protein S3 [Rhizanthella gardneri]
gi|255985044|gb|ACU46591.1| ribosomal protein S3 [Rhizanthella gardneri]
Length = 216
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 64/213 (30%), Positives = 115/213 (53%), Gaps = 10/213 (4%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
MGQKINP+ FRLG+ S WFA+ + L ED +IR + +++ G+
Sbjct: 1 MGQKINPLGFRLGITQIHYSFWFAKPKYFSMGLQEDERIRRCIHNYVQNKKKISSGFEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGK--KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPE 110
A + I++ ++++Y P L+ E++++ + + ++ + ++ KP
Sbjct: 61 AYMRIQKKIDLIQVMIYIGFPNLLREGLLSTWIGEELQRNVQKKFHRIFNIVIIKIEKPY 120
Query: 111 INATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLE 170
++A+ IA Q + RV R+ MK+ ++ + G++V +GR++G E++R E E
Sbjct: 121 AQPNILAEYIALQFKNRVSVRKIMKKVIELTEQTDTKGIQVQIAGRIDGKEIARVEWIRE 180
Query: 171 GRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
GRVPLQT+ A IDY + T YG+ GIK+++
Sbjct: 181 GRVPLQTICAKIDYCSYTIRTIYGNLGIKIWIF 213
>gi|203284394|ref|YP_002222134.1| 30S ribosomal protein S3 [Borrelia duttonii Ly]
gi|203287928|ref|YP_002222943.1| 30S ribosomal protein S3 [Borrelia recurrentis A1]
gi|226697667|sp|B5RM42|RS3_BORDL RecName: Full=30S ribosomal protein S3
gi|226697670|sp|B5RPI8|RS3_BORRA RecName: Full=30S ribosomal protein S3
gi|201083837|gb|ACH93428.1| 30S ribosomal protein S3 [Borrelia duttonii Ly]
gi|201085148|gb|ACH94722.1| 30S ribosomal protein S3 [Borrelia recurrentis A1]
Length = 276
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 81/214 (37%), Positives = 127/214 (59%), Gaps = 3/214 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P R+ +N W S+W+ Y +LHED IR LK IE
Sbjct: 1 MGQKVHPYSLRIKINRDWKSKWYFDKKLYSEILHEDFLIRRETMKFLKGIKFDISDIEII 60
Query: 61 HKNCR---IIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117
N + +++ + RPG +IG KG ++EKI + L+ + +I++ + E+ KPE +A ++A
Sbjct: 61 RNNLQRVTVVISTPRPGSVIGVKGANLEKIGQLLTRKVSKKINIKIKEIKKPEFDAQIVA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
IA+QLE R +R+ +K ++ S++ G G+K+ SGRL GAE++R+ EGR+PL T
Sbjct: 121 NGIAKQLENRASYRKLLKSSLLSSISKGIQGIKIKVSGRLGGAEIARSFEVKEGRIPLHT 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
LRA+IDYG A A T YG G+KV++ + +
Sbjct: 181 LRANIDYGFAEAYTTYGVIGVKVWLFKGEILGKQ 214
>gi|161511517|ref|NP_852839.2| 30S ribosomal protein S3 [Mycoplasma gallisepticum str. R(low)]
gi|3914904|sp|O52338|RS3_MYCGA RecName: Full=30S ribosomal protein S3
gi|2766509|gb|AAB95393.1| ribosomal protein S3 [Mycoplasma gallisepticum]
gi|284811867|gb|AAP56407.2| 30S ribosomal protein S3 [Mycoplasma gallisepticum str. R(low)]
gi|284930300|gb|ADC30239.1| 30S ribosomal protein S3 [Mycoplasma gallisepticum str. R(high)]
gi|284931067|gb|ADC31005.1| 30S ribosomal protein S3 [Mycoplasma gallisepticum str. F]
Length = 263
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 78/230 (33%), Positives = 132/230 (57%), Gaps = 3/230 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR-GSEYGALLHEDLKIREYLQCHLKQAGVAKILIER 59
MGQK+N R G+N W SRW A+ + G + +D KIR YL A ++ + IER
Sbjct: 1 MGQKVNSNGLRFGINKNWQSRWVAKTNQQTGDWIVQDEKIRNYLFKKFHSAFISNVDIER 60
Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE--IHLSVNEVPKPEINATLIA 117
T + R+ +Y+++PG+I+GK+ +I+ I ++ + + + V EV P ++A ++A
Sbjct: 61 TQTSIRVFIYASQPGIILGKEAANIKVILLAINKIVGRHIKVDVDVLEVGNPSLSAKIVA 120
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQT 177
+ +A +E R R AM++A++ ++ GA G+KV+ SGRLNG E++R + Y+EG V L T
Sbjct: 121 RELADAIENRTPLRTAMRQALKRVLKAGAKGIKVLVSGRLNGVEIARDKMYIEGNVTLST 180
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
LR IDY A+ +YG G+KV+++ + A + ++
Sbjct: 181 LRTDIDYALEEAQMSYGVIGVKVWINRGEIFGKDFYKKQAHIVKPKGSEA 230
>gi|27734513|sp|Q8VS61|RS3_ZIZJU RecName: Full=30S ribosomal protein S3
gi|18034033|gb|AAL57329.1|AF396941_1 ribosomal protein S3 [Candidatus Phytoplasma ziziphi]
Length = 250
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRPLIKNHYPKSTISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+
Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL
Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGVKGIKIIITGRLGGAEKARRDSISMGVVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG G+KV ++ + + +
Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215
>gi|293977937|ref|YP_003543367.1| 30S ribosomal protein S3P [Candidatus Sulcia muelleri DMIN]
gi|292667868|gb|ADE35503.1| SSU ribosomal protein S3P [Candidatus Sulcia muelleri DMIN]
Length = 223
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 87/212 (41%), Positives = 138/212 (65%), Gaps = 3/212 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K+N + RLG+ W S W++ Y + ED KIR+YL+ L +A +++I IER+
Sbjct: 1 MGHKVNTLSNRLGLIVGWQSLWYSH---YPERIKEDFKIRKYLENRLSKANISRIYIERS 57
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + S+RP +IIGK G++I+K++K+L+ +I +++ E+ KPE++A L+++SI
Sbjct: 58 LNRVIITISSSRPSIIIGKGGSEIDKLKKELNIFIYKKIQINIFEIKKPELDAVLVSKSI 117
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QLE R +++A+K + +A++ A+G+K+ SGRLNGAE++R E Y EGR+PL T RA
Sbjct: 118 ASQLENRGSYKKAIKICISAALQVNAEGIKIKISGRLNGAEMARKETYKEGRIPLSTFRA 177
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
IDY A T YG GIKV++ + +
Sbjct: 178 DIDYHMTEAHTNYGIIGIKVWIMKGEIYGKKN 209
>gi|260780676|ref|YP_003227050.1| 30S ribosomal protein S3 [Bryopsis hypnoides]
gi|260176754|gb|ACX33763.1| 30S ribosomal protein S3 [Bryopsis hypnoides]
Length = 243
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 85/237 (35%), Positives = 124/237 (52%), Gaps = 33/237 (13%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRLG + WFA+ Y + EDL IR++ + AG+ KI I R
Sbjct: 1 MGQKIHPYGFRLGNFQKHQANWFAKKENYTQKIFEDLFIRDFFFQRFRDAGILKISINRK 60
Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRK--------------------KLSNMTNSEI 99
N +I ++ +PG I K + I+K K S+++ + I
Sbjct: 61 FNNHIQICIFLTKPGFFISSKNAQLTTIQKTLETAFLKYQSSNFFRLNFLKQSSLSKNNI 120
Query: 100 HLSVNEVPKPEINATLI------------AQSIAQQLERRVVFRRAMKRAVQSAMRFGAD 147
+ P++ L+ A + +QLE+R+ FRRA+K+ ++ + R
Sbjct: 121 KSILEHQNTPKLTIQLMELVKIEQKAAFLADFLIEQLEKRIAFRRAVKKTLKRSERSKIQ 180
Query: 148 GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
G+K+ SGRLNGAE++RTE EGRVPLQTLRA+IDY A+T YG G+KV+V L
Sbjct: 181 GIKIQISGRLNGAEIARTEWIREGRVPLQTLRANIDYTYKTAKTIYGILGVKVWVFL 237
>gi|331268146|ref|YP_004347795.1| ribosomal protein S3 [Chlorella variabilis]
gi|325296323|gb|ADZ05043.1| ribosomal protein S3 [Chlorella variabilis]
Length = 237
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 78/224 (34%), Positives = 125/224 (55%), Gaps = 16/224 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK++P+ FRLG+ S W + + + +R YL AG+ I IER
Sbjct: 1 MGQKVHPVGFRLGITQKHQSYWCTTPQKSALWIEDASFLRNYLNKTYVGAGITHIEIERR 60
Query: 60 --THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-------------TNSEIHLSVN 104
+ I +Y+ARP L +G+ ++++R +L N + LS+
Sbjct: 61 DLDLPSLGIEIYAARPALFLGRDTKGLDRLRDELVNKLKAFYRKRNLSEPAKIHLSLSIK 120
Query: 105 EVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSR 164
+ +P+ +A ++A+ + + LE+R FRRAM++ VQ A+R G G+KV SGRLNGA+++R
Sbjct: 121 PLQEPDAHAAVLAEKLVEDLEQRKPFRRAMRQTVQRALRAGVKGIKVQVSGRLNGADIAR 180
Query: 165 TECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208
E EG VPLQTLRA +DY + A+T +G G+K++V + +
Sbjct: 181 AEAVREGPVPLQTLRADVDYSSKSAKTIFGLLGVKIWVFRGERL 224
>gi|184133063|gb|ACC68134.1| ribosomal protein S3 [Jujube witches'-broom phytoplasma]
Length = 250
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+
Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL
Sbjct: 121 AQNIAMQLQQRAFYKAGLKSAIQKALKSGVKGIKIIITGRLGGAEKARRDSISMGVVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG G+KV ++ + + +
Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215
>gi|296399208|gb|ADH10383.1| ribosomal protein S3 [Selaginella moellendorffii]
Length = 224
Score = 189 bits (479), Expect = 4e-46, Method: Composition-based stats.
Identities = 75/224 (33%), Positives = 113/224 (50%), Gaps = 18/224 (8%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLK------------ 48
MG+K NP FRLG+ + W+AR + + ED K+R+ + ++
Sbjct: 1 MGRKTNPPGFRLGITKNHHPNWYARPKIHDQYVREDKKVRDCIDAYVHGRRMWNSDVGGD 60
Query: 49 --QAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR----KKLSNMTNSEIHLS 102
G+ ++ I R + +++ P ++I G IE+ R K S+ +H++
Sbjct: 61 GGAEGIERVRIRRKTDLPTVEIHAGSPAILIRSHGRGIEQSRMNVRKNWSDSWIGRVHIT 120
Query: 103 VNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAEL 162
+E+ +P A+ IA Q + RV FRR K+A + A R G G+K +GRLNGAE+
Sbjct: 121 PSEISEPYGEPNTPAKHIAPQPKNRVAFRRTTKKATEPAKRNGRKGIKTQIAGRLNGAEI 180
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
+R E EGRVPLQT RA IDY A T YG G KV + +
Sbjct: 181 ARVEWAREGRVPLQTPRALIDYRYYPARTVYGVSGTKVRILRDE 224
>gi|269101051|ref|YP_003289199.1| 30S ribosomal protein S3 [Ectocarpus siliculosus]
gi|266631559|emb|CAV31230.1| Chloroplast 30S ribosomal protein S3 [Ectocarpus siliculosus]
gi|270118689|emb|CAT18757.1| Chloroplast 30S ribosomal protein S3 [Ectocarpus siliculosus]
Length = 222
Score = 187 bits (476), Expect = 7e-46, Method: Composition-based stats.
Identities = 79/220 (35%), Positives = 124/220 (56%), Gaps = 9/220 (4%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILI--- 57
MG K +P+ FRLG+ S W++ + Y + L ED +IREY+ L V I
Sbjct: 1 MGHKTHPLGFRLGIVQEDKSLWYSGSNSYVSFLKEDYQIREYIYQFLLLNKVGYSGITKL 60
Query: 58 ----ERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-TNSEIHLSVNEVPKPEIN 112
+ T K I + S PG I+GK G + K+ ++LS + N ++ +++ E+ KP
Sbjct: 61 IIKRDETKKRIYIEIQSVVPGRIVGKSGAFLRKLDEELSVLLKNKKVLINIVEITKPYTE 120
Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG-ADGVKVIASGRLNGAELSRTECYLEG 171
AT++ + ++LE RV FR ++ ++ G+K+ +GRLNGAE++RTE EG
Sbjct: 121 ATILVDLLVKKLEERVSFRMCIREILKRYRTEDELKGIKIQIAGRLNGAEIARTEWVREG 180
Query: 172 RVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
RVPLQTLRA+IDY A+T YG GIK+++ + ++
Sbjct: 181 RVPLQTLRANIDYSYKTAQTTYGILGIKIWLFKNEILTKK 220
>gi|221328716|gb|ACM17821.1| ribosomal protein S3 [Pigeon pea witches'-broom phytoplasma]
Length = 237
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 77/225 (34%), Positives = 129/225 (57%), Gaps = 4/225 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +PI+ RL + W+S W+A + L++ED +IR ++ + +A++ I+R
Sbjct: 1 MGQKSSPIILRLSLLRNWSSNWYAEDKKVPLLINEDYRIRNFINNYYPLGTIARVEIQRL 60
Query: 61 HK----NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K N I +++ + G+++G + K+ +++ + I++ V EV PE A+LI
Sbjct: 61 KKENEENIEIFLHTPKIGVVVGSDNKEKNKLVQEVYKLIKKNINIHVIEVKNPEKVASLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R FR K +Q A++ G G+K+ GRL+GAE++RTE ++G +PL
Sbjct: 121 AQNIAAQLQQRAFFRAVKKMYIQKALKAGVKGIKISLKGRLSGAEIARTETTIKGILPLG 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
T R+ IDY A+T +G G+KV+V + D I R
Sbjct: 181 TFRSKIDYAYVAAKTIHGVLGVKVWVCDGNYSPKDDREISKTISR 225
>gi|126680601|gb|ABO26526.1| ribosomal protein S3 [Picris echioides phyllody phytoplasma]
Length = 237
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 75/215 (34%), Positives = 128/215 (59%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +PI+ RL + W+S W+A + L++ED +IRE++ + +A++ I+R
Sbjct: 1 MGQKSSPIILRLSLLRNWSSNWYAEDKKVPLLINEDYRIREFINNYYPLGTIARVEIQRL 60
Query: 61 HK----NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K N I +++ + G+++G + + K+ +++ + I++ V EV PE +LI
Sbjct: 61 KKDNEENIEIFLHTPKTGVVVGSENKEKNKLNQEIYKLIKKNINIHVIEVKNPEKVTSLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R FR K ++ A++ G G+K+I GRL+GAE++RTE +EG +PL
Sbjct: 121 AQNIASQLQQRAFFRAVKKMHIRKALQAGVKGIKIILKGRLSGAEIARTETTIEGILPLG 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
T R+ IDY A+T +G G+KV+V +
Sbjct: 181 TFRSKIDYAYVAAKTIHGVLGVKVWVCDGNYSPKD 215
>gi|126680580|gb|ABO26512.1| ribosomal protein S3 [Sunn hemp witches'-broom phytoplasma]
Length = 239
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 78/225 (34%), Positives = 129/225 (57%), Gaps = 4/225 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +PI+ RL + W+S W+A + L++ED +IR ++ + +A++ I+R
Sbjct: 1 MGQKSSPIILRLSLLRNWSSNWYAEDKKVPLLINEDYRIRNFINNYYPLGTIARVEIQRL 60
Query: 61 HK----NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K N I +++ + G+++G + K+ +++ + I++ V EV PE A+LI
Sbjct: 61 KKENEENIEIFLHTPKIGVVVGSDNKEKNKLVQEVYKLIKKNINIHVIEVKNPEKVASLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R FR K +Q A++ G G+KV GRL+GAE++RTE ++G +PL
Sbjct: 121 AQNIAAQLQQRAFFRAVKKMYIQKALKAGVKGIKVSLKGRLSGAEIARTETTIKGILPLG 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
T R+ IDY A+T +G G+KV+V + D I R
Sbjct: 181 TFRSKIDYAYVAAKTIHGVLGVKVWVCDGNYSPKDDREISKTISR 225
>gi|126680571|gb|ABO26506.1| ribosomal protein S3 [Alfalfa witches'-broom phytoplasma]
gi|126680577|gb|ABO26510.1| ribosomal protein S3 [Tomato big bud phytoplasma (Australia)]
gi|126680583|gb|ABO26514.1| ribosomal protein S3 [Peanut witches'-broom phytoplasma]
gi|126680586|gb|ABO26516.1| ribosomal protein S3 [Sweet potato witches'-broom phytoplasma]
gi|126680589|gb|ABO26518.1| ribosomal protein S3 [Sesame phyllody phytoplasma]
gi|126680592|gb|ABO26520.1| ribosomal protein S3 [Sesame phyllody phytoplasma]
gi|166919356|gb|ABZ04074.1| ribosomal protein S3 [Cleome witches'-broom phytoplasma]
Length = 239
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 77/225 (34%), Positives = 129/225 (57%), Gaps = 4/225 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +PI+ RL + W+S W+A + L++ED +IR ++ + +A++ I+R
Sbjct: 1 MGQKSSPIILRLSLLRNWSSNWYAEDKKVPLLINEDYRIRNFINNYYPLGTIARVEIQRL 60
Query: 61 HK----NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K N I +++ + G+++G + K+ +++ + I++ V EV PE A+LI
Sbjct: 61 KKENEENIEIFLHTPKIGVVVGSDNKEKNKLVQEVYKLIKKNINIHVIEVKNPEKVASLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R FR K +Q A++ G G+K+ GRL+GAE++RTE ++G +PL
Sbjct: 121 AQNIAAQLQQRAFFRAVKKMYIQKALKAGVKGIKISLKGRLSGAEIARTETTIKGILPLG 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
T R+ IDY A+T +G G+KV+V + D I R
Sbjct: 181 TFRSKIDYAYVAAKTIHGVLGVKVWVCDGNYSPKDDREISKTISR 225
>gi|126680595|gb|ABO26522.1| ribosomal protein S3 [Cleome phyllody phytoplasma]
gi|187236188|gb|ACD02031.1| ribosomal protein S3 [Crotalaria witches'-broom phytoplasma]
Length = 239
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 77/225 (34%), Positives = 129/225 (57%), Gaps = 4/225 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +PI+ RL + W+S W+A + L++ED +IR ++ + +A++ I+R
Sbjct: 1 MGQKSSPIILRLSLLRNWSSNWYAEDKKVPLLINEDYRIRNFINNYYPLGTIARVEIQRL 60
Query: 61 HK----NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K N I +++ + G+++G + K+ +++ + I++ V EV PE A+LI
Sbjct: 61 KKENEENIEIFLHTPKIGVVVGSDNKEKNKLVQEVYKLIKKNINIHVIEVKNPEKVASLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R FR K +Q A++ G G+K+ GRL+GAE++RTE ++G +PL
Sbjct: 121 AQNIAAQLQQRAFFRAVEKMYIQKALKAGVKGIKISLKGRLSGAEIARTETTIKGILPLG 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
T R+ IDY A+T +G G+KV+V + D I R
Sbjct: 181 TFRSKIDYAYVAAKTIHGVLGVKVWVCDGNYSPKDDREISKTISR 225
>gi|254798682|ref|YP_003058311.1| ribosomal protein S3 [Parachlorella kessleri]
gi|229915630|gb|ACQ90973.1| ribosomal protein S3 [Parachlorella kessleri]
Length = 230
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 75/226 (33%), Positives = 124/226 (54%), Gaps = 16/226 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK++P+ FRLG+ S W + + + +R ++Q + AG+ I I R
Sbjct: 1 MGQKVHPLGFRLGITQKHQSYWCTKPRISAIWVDDASLLRRFIQKNYTGAGITNIEIHRR 60
Query: 60 --THKNCRIIVYSARPGLIIGK-------------KGTDIEKIRKKLSNMTNSEIHLSVN 104
+ + I +Y+ARP L G+ K ++ L + N I L +
Sbjct: 61 ELDYSSIAIKIYAARPALFSGRDLKSLDSLRDQLLKKLKAFYRKRNLPDPGNINISLYIK 120
Query: 105 EVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSR 164
V +P+ A ++A+ + + L++R +RRAM++ +Q A+R G G+KV SGRLNGA+++R
Sbjct: 121 PVKEPDSFAAVLAEKLVEDLQQRKPYRRAMRQVIQKAIRAGVKGIKVQISGRLNGADIAR 180
Query: 165 TECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210
+E EG VPLQTLRA IDY + A+T +G G+K++V + ++
Sbjct: 181 SEELREGPVPLQTLRADIDYSSKSAKTIFGLLGVKIWVFHGERLNP 226
>gi|126680574|gb|ABO26508.1| ribosomal protein S3 [Tomato big bud phytoplasma (Grape A)]
Length = 239
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 75/225 (33%), Positives = 128/225 (56%), Gaps = 4/225 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILI--- 57
MGQK +PI+ RL + W+S W+A + L++ED +IR ++ + +A++ I
Sbjct: 1 MGQKSSPIILRLSLLRNWSSNWYAEDKKVPLLINEDYRIRNFINNYYPLGTIARVEIPRL 60
Query: 58 -ERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
+ +N I +++ + G+++G + K+ +++ + I++ V EV PE A+LI
Sbjct: 61 KKENEENIEIFLHTPKIGVVVGSDNKEKNKLVQEVYKLIKKNINIHVIEVKNPEKVASLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R FR K +Q A++ G G+K+ GRL+GAE++RTE ++G +PL
Sbjct: 121 AQNIAAQLQQRAFFRAVKKMYIQKALKAGVKGIKISLKGRLSGAEIARTETTIKGILPLG 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
T R+ IDY A+T +G G+KV+V + D I R
Sbjct: 181 TFRSKIDYAYVAAKTIHGVLGVKVWVCDGNYSPKDDREISKTISR 225
>gi|91178045|gb|ABE27282.1| ribosomal protein S3 [cotton phyllosphere bacterium F]
Length = 161
Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 80/160 (50%), Positives = 110/160 (68%), Gaps = 4/160 (2%)
Query: 69 YSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRV 128
++ARPG++IGKKG D+EK+R+ L+ +H+++ E+ KPE++ L+AQS+AQQLERRV
Sbjct: 2 HTARPGIVIGKKGEDVEKLRQDLTKQMGVPVHINIEEIRKPELDGMLVAQSVAQQLERRV 61
Query: 129 VFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAV 188
+FRRAMKRAVQ+A R GA G+K+ SGRL GAE++RTE Y EGRVPL TLRA IDY
Sbjct: 62 MFRRAMKRAVQNATRIGAKGIKIQVSGRLGGAEIARTEWYREGRVPLHTLRADIDYANYE 121
Query: 189 AETAYGSCGIKVYVSLRDEVSDS----DSTIPAAEHRVVE 224
A T YG G+KV++ + + PA + +
Sbjct: 122 AHTTYGVIGVKVWIFKGEVIGGRQEELKPQAPAPRKKAAK 161
>gi|219877930|gb|ACL50614.1| ribosomal protein S3 [Chrysanthemum flattened stem Phytoplasma]
Length = 250
Score = 185 bits (469), Expect = 5e-45, Method: Composition-based stats.
Identities = 74/215 (34%), Positives = 124/215 (57%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK N RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R
Sbjct: 1 MGQKSNXNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+
Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL
Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGVKGIKIIITGRLGGAEKARRDSISMGVVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG G+KV ++ + + +
Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215
>gi|298500586|ref|ZP_07010390.1| SSU ribosomal protein S3 [Vibrio cholerae MAK 757]
gi|297540755|gb|EFH76812.1| SSU ribosomal protein S3 [Vibrio cholerae MAK 757]
Length = 168
Score = 185 bits (469), Expect = 5e-45, Method: Composition-based stats.
Identities = 81/159 (50%), Positives = 113/159 (71%)
Query: 66 IIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLE 125
+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++ L+A SIA QLE
Sbjct: 1 MTIHTARPGVVIGKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDGQLVADSIASQLE 60
Query: 126 RRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYG 185
RRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVPL TLRA IDY
Sbjct: 61 RRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRADIDYA 120
Query: 186 TAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
T+ A T YG G+KV++ + + + AAE + +
Sbjct: 121 TSSAHTTYGVIGVKVWIFKGEILGGMPAATEAAEPKADK 159
>gi|302824567|ref|XP_002993926.1| hypothetical protein SELMODRAFT_137759 [Selaginella moellendorffii]
gi|300138293|gb|EFJ05067.1| hypothetical protein SELMODRAFT_137759 [Selaginella moellendorffii]
Length = 224
Score = 185 bits (469), Expect = 5e-45, Method: Composition-based stats.
Identities = 74/223 (33%), Positives = 112/223 (50%), Gaps = 18/223 (8%)
Query: 2 GQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLK------------- 48
G+K NP FRLG+ + W+AR + + ED K+R+ + ++
Sbjct: 2 GRKTNPPGFRLGITKNHHPNWYARPKIHDQYVREDKKVRDCIDAYVHGRRMWNSDVGGDG 61
Query: 49 -QAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR----KKLSNMTNSEIHLSV 103
G+ ++ I R + +++ P ++I G IE+ R K S+ +H++
Sbjct: 62 GAEGIERVRIRRKTDLPTVEIHAGSPAILIRSHGRGIEQSRMNVRKNWSDSWIGRVHITP 121
Query: 104 NEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELS 163
+E+ +P A+ IA Q + RV FRR K+A + A R G G+K +GRLNGAE++
Sbjct: 122 SEISEPYGEPNTPAKHIAPQPKNRVAFRRTTKKATEPAKRNGRKGIKTQIAGRLNGAEIA 181
Query: 164 RTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
R E EGRVPLQT RA IDY A T YG G KV + +
Sbjct: 182 RVEWAREGRVPLQTPRALIDYRYYPARTVYGVSGTKVRILRDE 224
>gi|126680598|gb|ABO26524.1| ribosomal protein S3 [Italian alfalfa witches'-broom phytoplasma]
Length = 240
Score = 184 bits (467), Expect = 8e-45, Method: Composition-based stats.
Identities = 75/223 (33%), Positives = 129/223 (57%), Gaps = 4/223 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +PI+ RL + W+S W+A+ + L++ED IR+++ + +A++ I+R
Sbjct: 1 MGQKSSPIILRLSLLRNWSSNWYAKDKKVPLLINEDYLIRKFINNYYPLGTIARVEIQRL 60
Query: 61 HK----NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K N I +++ + G++IG + K+ +++ + I + V EV PE A+LI
Sbjct: 61 KKDNEENIEIFLHTPKIGVVIGADNKEKNKLTQEIYKLIKKNITIHVIEVKNPEKVASLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R FR K +Q A++ G G+K+ GRL+GAE++RTE ++G +PL
Sbjct: 121 AQNIASQLQQRAFFRAVKKMYIQKALKAGVKGIKISLKGRLSGAEIARTETTIKGILPLG 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
T R+ IDY A+T +G G+KV+V + + + +
Sbjct: 181 TFRSKIDYAYIAAKTIHGVLGVKVWVCDGNYSPKKEIRESSKQ 223
>gi|156598636|gb|ABU85574.1| ribosomal protein S3 [Scaevola aemula]
Length = 235
Score = 184 bits (467), Expect = 9e-45, Method: Composition-based stats.
Identities = 72/233 (30%), Positives = 116/233 (49%), Gaps = 30/233 (12%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINPI FRLG +S WF Y L +D KIR Y++ ++++
Sbjct: 1 MGQKINPIGFRLGTTQDHHSLWFEEPKNYSEGLQQDQKIRNYIKNYIQENMKISKDLGWK 60
Query: 52 -VAKILIERTHKNCRIIVYSARPGLIIGKKG-----------TDIEKIRKKLSNMTNSEI 99
+ I I++ +I Y + K+ +I K++ L +
Sbjct: 61 VITCIEIQKAINLIHVITYIGFSNKVREKQPGKKKKLAKQEKEEITKLQINLHKEFHFID 120
Query: 100 HLSVNEVP---------KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVK 150
L+ N + P N T++A +A QL+ RV FR+AMK+ ++ + + G G++
Sbjct: 121 RLTCNTIKFNLTIKVFKNPFKNPTILAAYLADQLKNRVSFRKAMKKTIELSQKAGTKGIQ 180
Query: 151 VIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
V +GR+ G E++R C+ +GR+PLQT+RA IDY + +T YG GIK++
Sbjct: 181 VKIAGRIGGKEIARVVCFKKGRLPLQTIRAKIDYCSYPVQTTYGVLGIKIWTF 233
>gi|306417114|emb|CBW48261.1| 30S ribosomal protein S3 [Hemp dogbane yellows phytoplasma]
Length = 237
Score = 184 bits (467), Expect = 9e-45, Method: Composition-based stats.
Identities = 74/215 (34%), Positives = 123/215 (57%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIRRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y+++ G+I G + + + + + N ++ +++ EV A L+
Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINNIEKLINKKVQINIFEVKAINKIAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL
Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRDSISMGVVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG G+KV ++ + + +
Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215
>gi|126643090|ref|YP_001086074.1| 30S ribosomal protein S3 [Acinetobacter baumannii ATCC 17978]
Length = 200
Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 88/176 (50%), Positives = 123/176 (69%), Gaps = 1/176 (0%)
Query: 51 GVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPE 110
V+ ILIER ++ + +ARPG++IGKKG DIEK++++L+N+ +S+NE+ +P+
Sbjct: 1 MVSNILIERPSGAAKVTISTARPGIVIGKKGEDIEKLQRELTNIMGVPAQVSINEIDRPD 60
Query: 111 INATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLE 170
++A L+A++IA QLE+RV+FRRAMKRAVQ+ MR GA G+KV SGRL GAE++RTE Y E
Sbjct: 61 LDARLVAEAIASQLEKRVMFRRAMKRAVQNTMRAGAKGIKVEVSGRLGGAEIARTEWYRE 120
Query: 171 GRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSD-SDSTIPAAEHRVVEK 225
GRVPL TLRA IDY T AET YG+ G+KV++ + + PA K
Sbjct: 121 GRVPLHTLRADIDYATMRAETTYGTIGVKVWIFRGEILGGMKQVMNPAPAEERPAK 176
>gi|7524928|ref|NP_045930.1| ribosomal protein S3 [Chlorella vulgaris]
gi|3024554|sp|P56365|RR3_CHLVU RecName: Full=30S ribosomal protein S3, chloroplastic
gi|2224522|dbj|BAA58006.1| 30S ribosomal protein S3 [Chlorella vulgaris]
Length = 231
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 78/224 (34%), Positives = 123/224 (54%), Gaps = 16/224 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI FRLG+ S W + + + +R +++ AG+ I I+R
Sbjct: 1 MGQKVHPIGFRLGITQKHRSYWCTTPQKSALWIQDASFLRNFIKKKYIGAGITHIEIQRQ 60
Query: 61 ---HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS-------------EIHLSVN 104
+ I +Y+AR I G +E+++++L + LSV
Sbjct: 61 DVDSPSLGIQIYAARLRQIAGNDSKGLERLQEELVKQLQIFYRKRNLVEPGTIHLRLSVK 120
Query: 105 EVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSR 164
+ PE A ++A+ + ++LE+R FRRAM++ VQ A+R G G+KV SGRLNGA+++R
Sbjct: 121 PLRAPEAYAEVLAEKLVEELEQRKPFRRAMRQTVQRALRAGVKGIKVQISGRLNGADIAR 180
Query: 165 TECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208
+E EG VPLQTLRA IDY + A+T +G GIK++V + +
Sbjct: 181 SEDVREGPVPLQTLRADIDYSSKPAKTIFGLLGIKIWVFRGERL 224
>gi|124494212|gb|ABN13155.1| ribosomal protein S3 [Soybean phyllody phytoplasma]
Length = 238
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 73/209 (34%), Positives = 125/209 (59%), Gaps = 4/209 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +PI+ RL + W S W++ + L+HED +R+++ + +A++ I+R
Sbjct: 1 MGQKSSPIVLRLSLLRNWASNWYSEDKKVPLLIHEDYNLRKFINNYYPLGTIARVEIQRF 60
Query: 61 HK----NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K N I +++ + G++IG + K+ +++ + I+++V EV P+ A+LI
Sbjct: 61 KKDNEENIEIFLHTPKIGVVIGADNKEKNKLVQEIYKLIKKNININVIEVKNPDKVASLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R FR K +Q A++ G G+K+ GRL+GAE++RTE ++G +PL
Sbjct: 121 AQNIASQLQQRAFFRAVKKMYIQKALKAGVKGIKISLKGRLSGAEIARTETTIKGILPLG 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
T R+ IDY A+T +G G+KV+V
Sbjct: 181 TFRSKIDYAYVAAKTIHGVLGVKVWVCDG 209
>gi|84028332|gb|ABC49685.1| ribosomal protein S3 [Coyol palm decline phytoplasma]
gi|84028336|gb|ABC49688.1| ribosomal protein S3 [Coconut decline phytoplasma]
gi|84028343|gb|ABC49693.1| ribosomal protein S3 [Carludovica palmata leaf yellowing
phytoplasma]
gi|117622258|gb|ABK51375.1| ribosomal protein S3 [Texas Phoenix palm phytoplasma]
gi|117622262|gb|ABK51378.1| ribosomal protein S3 [Texas Phoenix palm phytoplasma]
gi|213389863|gb|ACJ45991.1| ribosomal protein S3 [Florida sabal palm phytoplasma]
Length = 231
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 76/231 (32%), Positives = 125/231 (54%), Gaps = 4/231 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NPI RLG+N W S+W+A + + ED +IR+ + + ++KI+I+R
Sbjct: 1 MGQKSNPIGLRLGINKNWESQWYAEYKQVPFFVIEDFRIRKLINNFYTKGIISKIVIKRL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
N I +Y+++ GL+ + + + KKL + + +++ EV E A L+
Sbjct: 61 KKSNIDNIEIDLYTSKIGLVQSAEKKEKNVLIKKLEQLIKKKFNVNFFEVKSSEKIAILV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QLE+R FR K + ++ GA+GVK+ SGRL GAE++R E G VPL
Sbjct: 121 AQNIALQLEKRAFFRSVQKIFSKRVLKSGAEGVKITISGRLGGAEIARRESISLGLVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
T + IDYG + A T +G G++V ++ + + + + +E +
Sbjct: 181 TFKCDIDYGFSEAHTTFGVLGVQVLINNGIKKTPTLKINNNIKQTDLENKN 231
>gi|306417111|emb|CBW48259.1| 30S ribosomal protein S3 [Spartium witches'-broom phytoplasma
SI04-S4]
Length = 235
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+
Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAILV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL
Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRDSISMGVVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG G+KV ++ + + +
Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215
>gi|124494218|gb|ABN13159.1| ribosomal protein S3 [Crotalaria phyllody phytoplasma]
Length = 238
Score = 183 bits (465), Expect = 2e-44, Method: Composition-based stats.
Identities = 73/209 (34%), Positives = 124/209 (59%), Gaps = 4/209 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +PI+ RL + W S W++ + L+HED +R+++ + +A++ I+R
Sbjct: 1 MGQKSSPIVLRLSLLRNWASNWYSEDKKVPLLIHEDYNLRKFINNYYPLGTIARVEIQRF 60
Query: 61 HK----NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K N I +++ + G+ IG + K+ +++ + I+++V EV P+ A+LI
Sbjct: 61 KKDNEENIEIFLHTPKIGVXIGADNKEKNKLVQEIYKLIKKNININVIEVKNPDKVASLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R FR K +Q A++ G G+K+ GRL+GAE++RTE ++G +PL
Sbjct: 121 AQNIASQLQQRAFFRAVKKMYIQKALKAGVKGIKISLKGRLSGAEIARTETTIKGILPLG 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
T R+ IDY A+T +G G+KV+V
Sbjct: 181 TFRSKIDYAYVAAKTIHGVLGVKVWVCDG 209
>gi|33306250|gb|AAQ02798.1|AF385627_2 ribosomal protein S3 [Candidatus Phytoplasma vitis]
Length = 250
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+
Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL
Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRDSISMGVVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG G+KV ++ + + +
Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215
>gi|124494206|gb|ABN13151.1| ribosomal protein S3 [Cotton phyllody phytoplasma]
Length = 238
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 73/209 (34%), Positives = 123/209 (58%), Gaps = 4/209 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +PI+ RL + W S W++ + L+HED +R+++ + +A++ I+R
Sbjct: 1 MGQKSSPIVLRLSLLRNWASNWYSEDKKVPLLIHEDYNLRKFINNYYPLGTIARVEIQRF 60
Query: 61 HK----NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K N I +++ + G++IG + K+ +++ + I++ V EV P+ A+LI
Sbjct: 61 KKDNEENIEIFLHTPKIGVVIGADNKEKTKLVQEIYKLIKKNINIHVIEVKNPDKVASLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R FR K +Q A++ G G+K+ GRL GAE++RTE ++G +PL
Sbjct: 121 AQNIAAQLQQRAFFRAVKKMYIQKALKAGVKGIKISLKGRLGGAEIARTETTIKGILPLG 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
T R+ IDY A+T +G G+KV+V
Sbjct: 181 TFRSKIDYAYVAAKTIHGVLGVKVWVCDG 209
>gi|124494215|gb|ABN13157.1| ribosomal protein S3 [Faba bean phyllody phytoplasma]
Length = 238
Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats.
Identities = 73/209 (34%), Positives = 124/209 (59%), Gaps = 4/209 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +PI+ RL + W S W++ + L+HED +R+++ + +A++ I R
Sbjct: 1 MGQKSSPIVLRLSLLRNWASNWYSEDKKVPLLIHEDYNLRKFINNYYPLGTIARVEIPRF 60
Query: 61 HK----NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K N I +++ + G++IG + K+ +++ + I+++V EV P+ A+LI
Sbjct: 61 KKDNEENIEIFLHTPKIGVVIGADNKEKNKLVQEIYKLIKKNININVIEVKNPDKVASLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R FR K +Q A++ G G+K+ GRL+GAE++RTE ++G +PL
Sbjct: 121 AQNIASQLQQRAFFRAVKKMYIQKALKAGVKGIKISLKGRLSGAEIARTETTIKGILPLG 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
T R+ IDY A+T +G G+KV+V
Sbjct: 181 TFRSKIDYAYVAAKTIHGVLGVKVWVCDG 209
>gi|31075895|gb|AAP42384.1| ribosomal protein S3 [Hemp dogbane yellows phytoplasma]
Length = 250
Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats.
Identities = 74/215 (34%), Positives = 123/215 (57%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIRRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y+++ G+I G + + + + + N ++ +++ EV A L+
Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINNIEKLINKKVQINIFEVKAINKIAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL
Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRDSISMGVVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG G+KV ++ + + +
Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215
>gi|27734509|sp|Q8VL42|RS3_FLADO RecName: Full=30S ribosomal protein S3
gi|18034031|gb|AAL57328.1|AF396940_1 ribosomal protein S3 [Candidatus Phytoplasma vitis]
gi|18034037|gb|AAL57331.1|AF396943_1 ribosomal protein S3 [Candidatus Phytoplasma vitis]
gi|18034047|gb|AAL57336.1|AF396948_1 ribosomal protein S3 [Candidatus Phytoplasma vitis]
gi|18034053|gb|AAL57339.1|AF396951_1 ribosomal protein S3 [Candidatus Phytoplasma vitis]
gi|31075855|gb|AAP42354.1| ribosomal protein S3 [Candidatus Phytoplasma vitis]
gi|86755783|gb|ABD15118.1| ribosomal protein S3 [Candidatus Phytoplasma vitis]
gi|86755785|gb|ABD15119.1| ribosomal protein S3 [Candidatus Phytoplasma vitis]
gi|149797930|gb|ABR31810.1| ribosomal protein S3 variant rpV-Esv1 [Candidatus Phytoplasma
vitis]
gi|149797936|gb|ABR31813.1| ribosomal protein S3 variant rpV-Esv6 [Candidatus Phytoplasma
vitis]
gi|149797938|gb|ABR31814.1| ribosomal protein S3 variant rpV-Esv7 [Candidatus Phytoplasma
vitis]
Length = 250
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+
Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL
Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRDSISMGVVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG G+KV ++ + + +
Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215
>gi|311033948|gb|ADP55400.1| ribosomal protein S3 [Rubus stunt phytoplasma]
Length = 250
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 74/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ ++++ I+R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQVEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+
Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL
Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRDSISMGVVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG G+KV ++ + + +
Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215
>gi|31075887|gb|AAP42378.1| ribosomal protein S3 [Candidatus Phytoplasma spartii]
gi|31075891|gb|AAP42381.1| ribosomal protein S3 [Candidatus Phytoplasma spartii]
Length = 248
Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats.
Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+
Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAILV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL
Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRDSISMGVVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG G+KV ++ + + +
Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215
>gi|27734512|sp|Q8VS60|RS3_RUBST RecName: Full=30S ribosomal protein S3
gi|18034039|gb|AAL57332.1|AF396944_1 ribosomal protein S3 [Rubus stunt phytoplasma]
gi|31075871|gb|AAP42366.1| ribosomal protein S3 [Rubus stunt phytoplasma]
gi|31075879|gb|AAP42372.1| ribosomal protein S3 [Rubus stunt phytoplasma]
Length = 250
Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats.
Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+
Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL
Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRDSISMGVVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG G+KV ++ + + +
Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215
>gi|187940268|gb|ACD39364.1| ribosomal protein S3 [Candidatus Phytoplasma ulmi]
gi|187940271|gb|ACD39366.1| ribosomal protein S3 [Candidatus Phytoplasma ulmi]
gi|308523693|gb|ADO33679.1| ribosomal protein S3 [Candidatus Phytoplasma ulmi]
gi|308523696|gb|ADO33681.1| ribosomal protein S3 [Candidatus Phytoplasma ulmi]
gi|308523699|gb|ADO33683.1| ribosomal protein S3 [Candidatus Phytoplasma ulmi]
Length = 250
Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats.
Identities = 76/215 (35%), Positives = 125/215 (58%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y+++ G+I G + + + K+ + N +I +++ EV A L+
Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKIQINIFEVKAFNKIAILV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL
Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRDSISMGVVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG G+KV ++ + + +
Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215
>gi|18034043|gb|AAL57334.1|AF396946_1 ribosomal protein S3 [Candidatus Phytoplasma vitis]
gi|18034045|gb|AAL57335.1|AF396947_1 ribosomal protein S3 [Candidatus Phytoplasma vitis]
gi|18034051|gb|AAL57338.1|AF396950_1 ribosomal protein S3 [Candidatus Phytoplasma vitis]
gi|31075859|gb|AAP42357.1| ribosomal protein S3 [Candidatus Phytoplasma vitis]
gi|148299197|gb|ABQ58108.1| ribosomal protein S3 [Candidatus Phytoplasma vitis]
gi|148299200|gb|ABQ58110.1| ribosomal protein S3 [Candidatus Phytoplasma vitis]
Length = 250
Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats.
Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+
Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAILV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL
Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRDSISMGVVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG G+KV ++ + + +
Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215
>gi|159506774|gb|ABW97703.1| ribosomal protein S3 [Candidatus Phytoplasma ulmi]
Length = 250
Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats.
Identities = 76/215 (35%), Positives = 124/215 (57%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K I +Y+++ G+I G + + + K+ + N +I +++ EV A L+
Sbjct: 61 KKTNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKIQINIFEVKAFNKIAILV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL
Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRDSISTGVVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG G+KV ++ + + +
Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215
>gi|31075847|gb|AAP42348.1| ribosomal protein S3 [Alder yellows phytoplasma]
Length = 250
Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats.
Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+
Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINILEVKAINKIAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL
Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRDSISIGVVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG G+KV ++ + + +
Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215
>gi|31075875|gb|AAP42369.1| ribosomal protein S3 [Rubus stunt phytoplasma]
Length = 250
Score = 181 bits (460), Expect = 6e-44, Method: Composition-based stats.
Identities = 74/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+
Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE ++ + G VPL
Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKAKRDSISMGVVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG G+KV ++ + + +
Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215
>gi|18034029|gb|AAL57327.1|AF396939_1 ribosomal protein S3 [Candidatus Phytoplasma vitis]
Length = 250
Score = 181 bits (460), Expect = 6e-44, Method: Composition-based stats.
Identities = 76/215 (35%), Positives = 125/215 (58%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y+++ G+I G + + + K+ + N +I +++ EV A L+
Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKIQINIFEVKAINKIAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL
Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRDSISMGVVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG G+KV ++ + + +
Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215
>gi|27734514|sp|Q8VS63|RS3_ALDYE RecName: Full=30S ribosomal protein S3
gi|18034023|gb|AAL57324.1|AF396936_1 ribosomal protein S3 [Alder yellows phytoplasma]
gi|31075863|gb|AAP42360.1| ribosomal protein S3 [Alder yellows phytoplasma]
gi|31075867|gb|AAP42363.1| ribosomal protein S3 [Alder yellows phytoplasma]
Length = 250
Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats.
Identities = 74/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ + ++ +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNNYPKSTISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+
Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL
Sbjct: 121 AQNIAIQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRDSISMGVVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG G+KV ++ + + +
Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215
>gi|18034025|gb|AAL57325.1|AF396937_1 ribosomal protein S3 [Candidatus Phytoplasma vitis]
gi|18034035|gb|AAL57330.1|AF396942_1 ribosomal protein S3 [Candidatus Phytoplasma vitis]
gi|18034041|gb|AAL57333.1|AF396945_1 ribosomal protein S3 [Candidatus Phytoplasma vitis]
gi|86755787|gb|ABD15120.1| ribosomal protein S3 [Candidatus Phytoplasma vitis]
gi|149797942|gb|ABR31816.1| ribosomal protein S3 variant rpV-Gsv1 [Candidatus Phytoplasma
vitis]
Length = 250
Score = 181 bits (459), Expect = 7e-44, Method: Composition-based stats.
Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ + ++ +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNYYPKSTISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y+++ G+I G + + + K+ + N +I +++ EV A L+
Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKIQINIFEVKAINKIAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL
Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRDSISMGVVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG G+KV ++ + + +
Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215
>gi|31075851|gb|AAP42351.1| ribosomal protein S3 [Candidatus Phytoplasma vitis]
Length = 250
Score = 181 bits (459), Expect = 7e-44, Method: Composition-based stats.
Identities = 76/215 (35%), Positives = 125/215 (58%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y+++ G+I G + + + K+ + N +I +++ EV A L+
Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKIQINIFEVKAINKIAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL
Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRDSISMGVVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG G+KV ++ + + +
Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215
>gi|224472887|gb|ABR31811.2| ribosomal protein S3 variant rpV-Esv2 [Candidatus Phytoplasma
vitis]
Length = 250
Score = 181 bits (459), Expect = 7e-44, Method: Composition-based stats.
Identities = 74/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+
Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
A++IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL
Sbjct: 121 ARNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRDSISMGVVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG G+KV ++ + + +
Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215
>gi|31075907|gb|AAP42393.1| ribosomal protein S3 [Candidatus Phytoplasma ulmi]
Length = 250
Score = 181 bits (459), Expect = 7e-44, Method: Composition-based stats.
Identities = 76/215 (35%), Positives = 123/215 (57%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y+++ G+I G + + + K+ + N +I +++ EV A L+
Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKIQINIFEVKAFNKIAILV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R G VPL
Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRNSISMGIVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG G+KV ++ + +
Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGGVLPNK 215
>gi|309322075|ref|YP_003933892.1| ribosomal protein S3 [Erodium texanum]
gi|197131496|gb|ACH47266.1| ribosomal protein S3 [Erodium texanum]
gi|300069168|gb|ADJ66290.1| ribosomal protein S3 [Erodium texanum]
Length = 242
Score = 181 bits (459), Expect = 8e-44, Method: Composition-based stats.
Identities = 67/242 (27%), Positives = 119/242 (49%), Gaps = 38/242 (15%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG S WF + +Y L ED KIR+ + ++
Sbjct: 1 MGQKINPLGFRLGTTQNHYSIWFKQPKKYCEGLQEDQKIRDCITNYIDNQRVSRVDAMTD 60
Query: 52 -VAKILIERTHKNCRIIVYSARPGLIIGKKGT-------------------------DIE 85
+++I IE+ ++ +Y +P + K +++
Sbjct: 61 CISRIQIEKGIDGVKVTIYMGKPQFLTEDKPPKSKELKGKKSQKEKKRKELNETRIKELK 120
Query: 86 KIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRF- 144
+K+ + N ++ +S+ ++ KP + +IA+ +A QL+ R+ FR+AM++ ++ A
Sbjct: 121 GNVEKVLHCENQKLKISIRKIRKPYGDPKIIAEFLANQLKSRISFRKAMQKTIELAADKE 180
Query: 145 --GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202
A G++V +GR+ G E++R E +GRV LQT+R I + + T +G GIK++V
Sbjct: 181 EGCAKGIQVQIAGRIEGKEIARVEWLRKGRVSLQTIRTKIHFCSTTVRTIHGVLGIKIWV 240
Query: 203 SL 204
S
Sbjct: 241 SK 242
>gi|269991351|emb|CAX12535.1| 30S ribosomal protein S3 [Fucus vesiculosus]
Length = 222
Score = 180 bits (458), Expect = 8e-44, Method: Composition-based stats.
Identities = 78/220 (35%), Positives = 126/220 (57%), Gaps = 9/220 (4%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILI--- 57
MG K +P+ FRLG T S W+++ + Y LL +D IREY++ L V I
Sbjct: 1 MGHKTHPLGFRLGGLQTDRSLWYSKTNSYIYLLKDDYAIREYIRTFLFLNQVGYSGITKI 60
Query: 58 ----ERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEIN 112
+ T K + + S PG IIGK G ++++ +KL ++ ++ +++ EV +P
Sbjct: 61 IIKSDETRKKIYVEIQSVVPGRIIGKSGLLLKELDEKLQSLIKDKKVLINIIEVEQPYQE 120
Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEG 171
A+++ + ++LE RV +R+ ++ +Q G G+K+ +GRLNGAE++RTE EG
Sbjct: 121 ASILVDILVKKLEERVAYRKCVREILQRYRTEEGLKGIKIQIAGRLNGAEIARTEWVREG 180
Query: 172 RVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
RVPLQTLRA IDY A+T YG GIK+++ + ++
Sbjct: 181 RVPLQTLRADIDYSYKTAQTTYGILGIKLWLFKNEVLTKK 220
>gi|61236192|sp|P0A4C1|RS3_ELMPH RecName: Full=30S ribosomal protein S3
gi|61236196|sp|P0A4C2|RS3_ELYEP RecName: Full=30S ribosomal protein S3
gi|18034027|gb|AAL57326.1|AF396938_1 ribosomal protein S3 [Candidatus Phytoplasma ulmi]
gi|18034049|gb|AAL57337.1|AF396949_1 ribosomal protein S3 [Elm witches'-broom phytoplasma]
gi|31075899|gb|AAP42387.1| ribosomal protein S3 [Candidatus Phytoplasma ulmi]
gi|31075903|gb|AAP42390.1| ribosomal protein S3 [Candidatus Phytoplasma ulmi]
gi|31075911|gb|AAP42396.1| ribosomal protein S3 [Candidatus Phytoplasma ulmi]
gi|308523702|gb|ADO33685.1| ribosomal protein S3 [Candidatus Phytoplasma ulmi]
Length = 250
Score = 180 bits (458), Expect = 8e-44, Method: Composition-based stats.
Identities = 76/215 (35%), Positives = 124/215 (57%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y+++ G+I G + + + K+ + N +I +++ EV A L+
Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKIQINIFEVKAFNKIAILV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R G VPL
Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRNSISMGIVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG G+KV ++ + + +
Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215
>gi|83265571|gb|ABB97539.1| ribosomal protein S3 [Palm lethal yellowing phytoplasma]
gi|124494182|gb|ABN13137.1| ribosomal protein S3 [Lethal yellowing phytoplasma]
gi|126680604|gb|ABO26528.1| ribosomal protein S3 [Coconut lethal yellowing phytoplasma]
Length = 230
Score = 180 bits (458), Expect = 9e-44, Method: Composition-based stats.
Identities = 74/209 (35%), Positives = 118/209 (56%), Gaps = 4/209 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NPI RLG+N W S+W+A + + ED +IR+ + + ++ I+I+R
Sbjct: 1 MGQKSNPIGLRLGINKNWESQWYAEYKQVPFFVIEDFRIRKLINNFYSKGIISNIVIKRL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
N I +Y+++ G++ + + + KKL + + +++ EV + A L+
Sbjct: 61 KKSNIDNIEIDLYTSKIGIVQSAEKKEKNSLIKKLEQLIKKKFNVNFFEVKSSDKIAILV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QLE+R FR K + ++ GA GVK+I SGRL GAE++R E G VPL
Sbjct: 121 AQNIALQLEKRAFFRSVQKIFSKKVLKSGAKGVKIIISGRLVGAEIARRESISLGLVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
TL+ IDYG + A T +G G++V ++
Sbjct: 181 TLKCDIDYGFSEAHTTFGVLGVQVLINNG 209
>gi|209528353|ref|ZP_03276804.1| ribosomal protein S3 [Arthrospira maxima CS-328]
gi|209491206|gb|EDZ91610.1| ribosomal protein S3 [Arthrospira maxima CS-328]
Length = 199
Score = 180 bits (458), Expect = 9e-44, Method: Composition-based stats.
Identities = 81/180 (45%), Positives = 118/180 (65%), Gaps = 2/180 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+PI FRLGV SRWFA S+Y LL ED IR+Y+Q +L AG++ + IER
Sbjct: 1 MGQKIHPIGFRLGVTQEHKSRWFADASQYPQLLQEDHTIRKYIQKNLSNAGISDVRIERK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLSVNEVPKPEINATLIAQ 118
+ V +ARPG+++G+ G I+ +R+ L +N +I ++V EV + + +ATLIA+
Sbjct: 61 ADQIDLEVLTARPGVVVGRGGAGIDSLRQGLQKELGSNRQIRINVVEVSRVDADATLIAE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
+IA QLE+RV FRR +++A+ A + G +G+K+ SGRLNGAE++RTE E P
Sbjct: 121 NIAAQLEKRVSFRRVVRQAITRAQKAGIEGIKIQVSGRLNGAEIARTEWTREVVFPYTPY 180
>gi|31075883|gb|AAP42375.1| ribosomal protein S3 [Rubus stunt phytoplasma]
Length = 250
Score = 180 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+
Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL
Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRDSIFMGVVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG G+KV ++ + + +
Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215
>gi|124494185|gb|ABN13139.1| ribosomal protein S3 [Lethal yellowing phytoplasma]
Length = 230
Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats.
Identities = 74/209 (35%), Positives = 117/209 (55%), Gaps = 4/209 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NPI RLG+N W S+W+A + + ED +IR+ + + ++ I+I+R
Sbjct: 1 MGQKSNPIGLRLGINKNWESQWYAEYKQVPFFVIEDFRIRKLINNFYSKGIISNIVIKRL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
N I +Y+++ G++ + + + KKL + + +++ EV + A L+
Sbjct: 61 KKSNIDNIEIDLYTSKIGIVQSAEKKEKNSLIKKLEQLIKKKFNVNFFEVKSSDKIAILV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QLE+R FR K + ++ GA GVK+I SGRL GAE++R E G VPL
Sbjct: 121 AQNIALQLEKRAFFRSVQKIFSKKVLKSGAKGVKIIISGRLGGAEIARRESISLGLVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
TL+ IDYG A T +G G++V ++
Sbjct: 181 TLKCDIDYGFPEAHTTFGVLGVQVLINNG 209
>gi|124494209|gb|ABN13153.1| ribosomal protein S3 [Lime witches'-broom phytoplasma]
Length = 239
Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats.
Identities = 73/209 (34%), Positives = 125/209 (59%), Gaps = 4/209 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +PI+ RL + W S W++ + L+HED +R+++ + +A++ I+R
Sbjct: 1 MGQKSSPIVLRLSLLRNWASNWYSEDKKVPLLIHEDYNLRKFINNYYPLGTIARVEIQRF 60
Query: 61 HK----NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K N I +++ + G++IG + K+ +++ + I+++V EV P+ A+LI
Sbjct: 61 KKDNEENIEIFLHTPKIGVVIGADNKEKNKLVQEIYKLIKKNININVIEVKNPDKVASLI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R FR K +Q A++ G G+K+ GRL+GAE++RTE ++G +PL
Sbjct: 121 AQNIAAQLQQRAFFRAVKKMYIQKALKAGVKGIKISLKGRLSGAEIARTETTIKGILPLG 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
T R+ IDY A+T +G G+KV+V
Sbjct: 181 TFRSKIDYAYVAAKTIHGVLGVKVWVCDG 209
>gi|255961335|ref|YP_003097517.1| ribosomal protein S3 [Selaginella moellendorffii]
gi|254941507|gb|ACT89022.1| ribosomal protein S3 [Selaginella moellendorffii]
Length = 220
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 72/220 (32%), Positives = 109/220 (49%), Gaps = 18/220 (8%)
Query: 5 INPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLK--------------QA 50
NP FRLG+ + W+AR + + ED K+R+ + ++
Sbjct: 1 TNPPGFRLGITKNHHPNWYARPKIHDQYVREDKKVRDCIDAYVHGRRMWNSDVGGDGGAE 60
Query: 51 GVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR----KKLSNMTNSEIHLSVNEV 106
G+ ++ I R + +++ P ++I G IE+ R K S+ +H++ +E+
Sbjct: 61 GIERVRIRRKTDLPTVEIHAGSPAILIRSHGRGIEQSRMNVRKNWSDSWIGRVHITPSEI 120
Query: 107 PKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTE 166
+P A+ IA Q + RV FRR K+A + A R G G+K +GRLNGAE++R E
Sbjct: 121 SEPYGEPNTPAKHIAPQPKNRVAFRRTTKKATEPAKRNGRKGIKTQIAGRLNGAEIARVE 180
Query: 167 CYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
EGRVPLQT RA IDY A T YG G KV + +
Sbjct: 181 WAREGRVPLQTPRALIDYRYYPARTVYGVSGTKVRILRDE 220
>gi|149797934|gb|ABR31812.1| ribosomal protein S3 variant rpV-Esv5 [Candidatus Phytoplasma
vitis]
gi|224472890|gb|ABR31815.2| ribosomal protein S3 variant rpV-Esv8 [Candidatus Phytoplasma
vitis]
Length = 250
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 75/215 (34%), Positives = 125/215 (58%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R
Sbjct: 1 MGQKSNPNGSRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+
Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL
Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRDSISMGVVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG G+KV ++ + + +
Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVKVIINHGEVLPNK 215
>gi|84028339|gb|ABC49690.1| ribosomal protein S3 [Coconut lethal yellowing phytoplasma]
Length = 230
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 73/209 (34%), Positives = 117/209 (55%), Gaps = 4/209 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NPI RLG+N W S+W+A + + ED +IR+ + + ++ I+I+R
Sbjct: 1 MGQKSNPIGLRLGINKNWESQWYAEYKQVPFFVIEDFRIRKLINNFYSKGIISNIVIKRL 60
Query: 60 ---THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
N I +Y+++ G++ + + + KKL + + +++ EV + A L+
Sbjct: 61 KKSNIDNIEIDLYTSKIGIVQSAEKKEKNSLIKKLEQLIKKKFNVNFFEVKSSDKIAILV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
AQ+IA QLE+R FR K + ++ GA GVK+I SGRL G E++R E G VPL
Sbjct: 121 AQNIALQLEKRAFFRSVQKIFSKKVLKSGAKGVKIIISGRLVGPEIARRESISLGLVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
TL+ IDYG + A T +G G++V ++
Sbjct: 181 TLKCDIDYGFSEAHTTFGVLGVQVLINNG 209
>gi|148645066|gb|ABR01058.1| RpsC [uncultured Geobacter sp.]
Length = 163
Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats.
Identities = 87/163 (53%), Positives = 127/163 (77%), Gaps = 1/163 (0%)
Query: 9 LFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIV 68
FRLGV TW+S+W+A ++Y LLHEDL IR++L+ L +GV+KI IE C+I +
Sbjct: 2 GFRLGVTKTWDSKWYAE-ADYAKLLHEDLAIRKFLKKRLYSSGVSKIEIEXAANKCKINI 60
Query: 69 YSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRV 128
++ARPGLIIGKKG+++ I+K+L+ +T+ EI +++NEV KPE++A L+A+++A QLERR+
Sbjct: 61 FTARPGLIIGKKGSEVXTIKKELALITSKEIFITINEVRKPELDAQLVAENVALQLERRI 120
Query: 129 VFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEG 171
FRRAMK++V S ++FGA G+++ SGRL GAE+SRTE Y EG
Sbjct: 121 AFRRAMKKSVTSTLKFGAKGIRITCSGRLGGAEMSRTEWYREG 163
>gi|213496084|gb|ACJ49190.1| ribosomal protein S3 [uncultured Geobacter sp.]
Length = 155
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 85/155 (54%), Positives = 122/155 (78%)
Query: 49 QAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPK 108
+GV+KI IER +I +++ARPGLIIGKKG+++E ++K+L+ +T+ E++L++ EV K
Sbjct: 1 HSGVSKIEIERAAGKAKINIFTARPGLIIGKKGSEVETLKKELAKLTDKEVYLNIQEVRK 60
Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168
PE++A L+A+++A QLERR+ FRRAMK++V S ++FGA G+++ SGRL GAE+SRTE Y
Sbjct: 61 PELDAQLVAENVALQLERRIAFRRAMKKSVTSTLKFGAKGIRITCSGRLGGAEMSRTEWY 120
Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
EGRVPL TLRA IDYG A A+T YG G+KV +
Sbjct: 121 REGRVPLHTLRADIDYGFAEAKTTYGIIGVKVLLF 155
>gi|156598489|gb|ABU85503.1| ribosomal protein S3 [Passiflora biflora]
Length = 232
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 70/232 (30%), Positives = 119/232 (51%), Gaps = 29/232 (12%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
M QKINP+ FR+G +S WF + Y L ED +IR +Q ++++ G+
Sbjct: 1 MAQKINPLGFRVGTTQNHHSLWFEQPKNYSQGLQEDKRIRNCIQNYVQKNIKFPSGIEGI 60
Query: 53 AKILIERTHKNCRIIVYSA---------------RPGLIIGKKGTDIEKIRKKLSNMTN- 96
++I I++ ++I+ + +I + IE++ + N
Sbjct: 61 SRIEIQKGIDLIQVIIVMGFLKLEKRQSKKIAELQKKVIKELETNGIEELWMIVQKEMNP 120
Query: 97 -----SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKV 151
++++ + + KP + ++A+ IA+QL+ RV F +AMK+A++ A R G+KV
Sbjct: 121 ISLSYRKLNIKIRRIRKPYKDPIILAKFIAEQLKNRVAFPKAMKKAIELAKRAHTKGIKV 180
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGRL G + +R GRVPLQT+RA I+Y + +T YG GIK++V
Sbjct: 181 QISGRLGGKDKARVAWIRAGRVPLQTVRAKINYCSYTVQTIYGVLGIKIWVF 232
>gi|149797944|gb|ABR31817.1| ribosomal protein S3 variant rpV-Gsv3 [Candidatus Phytoplasma
vitis]
Length = 250
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 73/215 (33%), Positives = 125/215 (58%), Gaps = 4/215 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ + ++ +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNYYPKSTISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y+++ G+I G + + + K+ + N +I +++ EV A L+
Sbjct: 61 KKSNDEFIEIDLYTSKIGVIQGPENKNKNSLINKIEKLINKKIQINIFEVKAINKIAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
A++IA QL++R ++ +K A+Q A++ G G+K+I +GRL GAE +R + G VPL
Sbjct: 121 ARNIAMQLQQRAFYKAVLKSAIQKALKSGIKGIKIIITGRLGGAEKARRDSISMGVVPLN 180
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
TLRA IDY A T YG G++V ++ + + +
Sbjct: 181 TLRADIDYAFEEAHTTYGVLGVRVIINYGEVLPNK 215
>gi|213496086|gb|ACJ49191.1| ribosomal protein S3 [uncultured Geobacter sp.]
Length = 155
Score = 179 bits (453), Expect = 4e-43, Method: Composition-based stats.
Identities = 85/155 (54%), Positives = 122/155 (78%)
Query: 49 QAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPK 108
+GV+KI IER +I +++ARPGLIIGKKG+++E ++K+L+ +T+ E++L++ EV K
Sbjct: 1 HSGVSKIEIERAAGKAKINIFTARPGLIIGKKGSEVETLKKELAKLTDKEVYLNIQEVRK 60
Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168
PE++A L+A+++A QLERR+ FRRAMK++V S ++FGA G+++ SGRL GAE+SRTE Y
Sbjct: 61 PELDAQLVAENVAMQLERRIAFRRAMKKSVTSTLKFGAKGIRITCSGRLGGAEMSRTEWY 120
Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
EGRVPL TLRA IDYG A A+T YG G+KV +
Sbjct: 121 REGRVPLHTLRADIDYGFAEAKTTYGIIGVKVLLF 155
>gi|294807321|ref|ZP_06766134.1| ribosomal protein S3 [Bacteroides xylanisolvens SD CC 1b]
gi|294445486|gb|EFG14140.1| ribosomal protein S3 [Bacteroides xylanisolvens SD CC 1b]
Length = 212
Score = 179 bits (453), Expect = 4e-43, Method: Composition-based stats.
Identities = 82/188 (43%), Positives = 128/188 (68%)
Query: 34 HEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN 93
ED KIR+YL L +A V++I+IERT K I V +ARPG+IIGK G +++K++++L
Sbjct: 2 LEDSKIRKYLNARLAKASVSRIVIERTLKLVTITVCTARPGIIIGKGGQEVDKLKEELKK 61
Query: 94 MTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIA 153
+T+ +I +++ EV +PE++A ++A +IA+Q+E ++ +RRA+K A+ + MR GA+G+K+
Sbjct: 62 VTDKDIQINIFEVKRPELDAVIVANNIARQVEGKIAYRRAIKMAIANTMRMGAEGIKIQI 121
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
SGRLNGAE++R+E Y EGR PL T RA IDY A A T G GIKV++ + +
Sbjct: 122 SGRLNGAEMARSEMYKEGRTPLHTFRADIDYCHAEALTKVGLLGIKVWICRGEVFGKKEL 181
Query: 214 TIPAAEHR 221
+ +
Sbjct: 182 APNFTQSK 189
>gi|295136915|ref|YP_003587748.1| ribosomal protein S3 [Lathyrus sativus]
gi|293338637|gb|ADE43609.1| ribosomal protein S3 [Lathyrus sativus]
Length = 226
Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats.
Identities = 64/225 (28%), Positives = 120/225 (53%), Gaps = 20/225 (8%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ----------- 49
MGQKI+P++FRLG + S WFA+ Y + ED IR + +++
Sbjct: 1 MGQKIHPLVFRLGATQSHYSIWFAKPKMYSENVKEDKIIRYCINNFIQKTVPESCEFETD 60
Query: 50 ---AGVAKILIERTHKNCRIIVYSARPGLIIGK----KGTDIEKIRKKLSNMTNSEIHLS 102
G+ +I I++ ++I+Y P + K + ++ +K N E+ L
Sbjct: 61 ISGYGMGRIKIQKRIDLIKVIIYMGLPDSLKEKVKDLRVEQLKTQVQKKVTCGNRELDLE 120
Query: 103 VNEVPKPEI--NATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGA 160
+ ++P P + +A ++A+ +++ L R+ FR+AM++ ++ A + GV++ +GR+ G
Sbjct: 121 ITKLPSPYLYRDAKIVAEFLSELLRNRISFRKAMQKGIELAEQADTKGVQIKIAGRMEGK 180
Query: 161 ELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
E++R E EGRVPLQT+RA +D+ + T +G G+K+++
Sbjct: 181 EIARVEWTREGRVPLQTIRAPMDFCSVPLVTLFGVFGVKIWIFQN 225
>gi|325989713|ref|YP_004249412.1| 30S ribosomal protein S3 [Mycoplasma suis KI3806]
gi|323574798|emb|CBZ40458.1| 30S ribosomal protein S3 [Mycoplasma suis]
Length = 241
Score = 177 bits (450), Expect = 7e-43, Method: Composition-based stats.
Identities = 73/211 (34%), Positives = 113/211 (53%), Gaps = 6/211 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGA-LLHEDLKIREYLQCHLKQAGVAKILIER 59
MGQK NP RLG N W SRW A ++ A + ED KIR++L + +A+I I+R
Sbjct: 1 MGQKSNPNCVRLGFNKNWLSRWNAPDRKHAALWILEDEKIRKFLNKECRDGILAQIEIDR 60
Query: 60 THKNC---RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLS--VNEVPKPEINAT 114
+ + + + G K+ + L +TN + ++ E+ P +++
Sbjct: 61 FINLQGVWTLSITLHLIEIGLYNHGETKNKLVRMLRRLTNKKWEINLIFLELKNPGVSSI 120
Query: 115 LIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVP 174
++A + + LE R R MK+ ++ AM GA GVK+ SGR+NGA+++R E EG +P
Sbjct: 121 VLANEVVELLEARTPLRMVMKKTIKKAMYSGARGVKIQVSGRINGADMARIESCTEGEIP 180
Query: 175 LQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
TLRA I+Y VA T YG G+KV+V+
Sbjct: 181 CSTLRADIEYCYRVARTTYGVLGVKVWVNRG 211
>gi|222084151|ref|YP_002519746.1| ribosomal protein S3 [Gnetum parvifolium]
gi|149941462|dbj|BAF64898.1| ribosomal protein S3 [Gnetum parvifolium]
gi|220983488|dbj|BAH11256.1| ribosomal protein S3 [Gnetum parvifolium]
Length = 214
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 70/214 (32%), Positives = 124/214 (57%), Gaps = 8/214 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA------GVAK 54
MGQK+NP+ FRLGV S WFA+ +Y L ED+KI + ++ ++ G+A+
Sbjct: 1 MGQKVNPLGFRLGVTQKNYSVWFAQNRDYSKTLQEDVKINQNIEKFFQKQRKHSYLGIAQ 60
Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEIN 112
I I+R + +Y+ L+ +KG +++ ++ N ++++ V + KP N
Sbjct: 61 IEIQRKVNLINVTIYTGFSSLLNNEKGEFSELKNKIRQSLGPINQKLNIKVGILSKPYQN 120
Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172
A ++A+ IAQQLE+RV ++ +++AV+ A + +G+++ +GRL G E +R GR
Sbjct: 121 AKILAEYIAQQLEKRVAVKKILQKAVELAQKEDIEGIRIQVAGRLGGRERTRKAKIKIGR 180
Query: 173 VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
V LQTLRA +DY T +G+ GI +++ +++
Sbjct: 181 VTLQTLRAEMDYCCYTVRTIHGTFGILLWIFMKE 214
>gi|228017212|gb|ACP52032.1| ribosomal protein S3 [Pinus leiophylla var. chihuahuana]
Length = 217
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 74/214 (34%), Positives = 114/214 (53%), Gaps = 12/214 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIRE--------YLQCHLKQAGV 52
M QKINP+ FRLGV S WFA+ Y L ED KIR +++ G+
Sbjct: 1 MAQKINPLGFRLGVTQNERSHWFAQQRNYSKDLREDQKIRTXXENYVRTHIKSSSNYGGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLI-IGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPK 108
A++ P L+ I +G IEK+R + NM + ++H+++ +V K
Sbjct: 61 ARVXXXXXXXXXXXXXXIGFPNLLLIEGRGQGIEKLRNDVLNMLDSVDRKLHIAIEKVAK 120
Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168
P ++A+ IA QLE+RV FR+ MK+A++ A R +G+++ +GRL+G E++R E
Sbjct: 121 PYRKPNILAEYIALQLEKRVPFRKTMKKAIELAEREEVEGIQIQIAGRLDGKEIARVEWX 180
Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202
QT+RA IDY +T YG GIK+++
Sbjct: 181 XXXXXXXQTIRARIDYCYYXVKTIYGVLGIKIWI 214
>gi|172072886|ref|YP_001806647.1| ribosomal protein S3 [Cryptomeria japonica]
gi|171854905|dbj|BAG16645.1| ribosomal protein S3 [Cryptomeria japonica]
gi|239794274|dbj|BAH73271.1| ribosomal protein S3 [Cryptomeria japonica]
gi|239794356|dbj|BAH73352.1| ribosomal protein S3 [Cryptomeria japonica]
Length = 230
Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats.
Identities = 79/230 (34%), Positives = 123/230 (53%), Gaps = 28/230 (12%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ---------AG 51
MG KINP+ FRLG S WF +Y L ED +I ++ +++ G
Sbjct: 1 MGNKINPLGFRLGFTQNHCSLWF-EERDYSEDLREDERIYNCIENYVQHIKSSINSSYGG 59
Query: 52 VAKILIERTHKNCRIIVYSARPGLIIGKKGTD----------IEKIRKKLSNM------- 94
+ +I I + + + +Y A L I KKG + I+++RK++ NM
Sbjct: 60 ITRIEILKQTELISVNIYIAFVDLFIEKKGQEKKKKKDDEQEIKQLRKEVQNMLVQSMLD 119
Query: 95 -TNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIA 153
N ++ +S+ +V KP ++A+ IA QL+ RV R+ MK+A++ A + +G+K+
Sbjct: 120 SVNRKLVISIEKVEKPYREPKILAEYIALQLKERVEIRKIMKKAIELAEKADVEGIKIQI 179
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
GRLNG E +R E ++GRVPLQTLRA IDY +T YG GIK+++
Sbjct: 180 KGRLNGIERARKESAMQGRVPLQTLRAKIDYCYYAVQTVYGVLGIKIWIF 229
>gi|325973278|ref|YP_004250342.1| 30S ribosomal protein S3 [Mycoplasma suis str. Illinois]
gi|323651880|gb|ADX97962.1| 30S ribosomal protein S3 [Mycoplasma suis str. Illinois]
Length = 241
Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats.
Identities = 72/211 (34%), Positives = 113/211 (53%), Gaps = 6/211 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGA-LLHEDLKIREYLQCHLKQAGVAKILIER 59
MGQK NP RLG N W SRW + ++ A + ED KIR++L + +A+I I+R
Sbjct: 1 MGQKSNPNCVRLGFNKNWLSRWNSPDRKHAALWILEDEKIRKFLNKECRDGILAQIEIDR 60
Query: 60 THKNC---RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLS--VNEVPKPEINAT 114
+ + + + G K+ + L +TN + ++ E+ P +++
Sbjct: 61 FINLQGVWTLSITLHLIEIGLYNHGETKNKLVRMLRRLTNKKWEINLIFLELKNPGVSSI 120
Query: 115 LIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVP 174
++A + + LE R R MK+ ++ AM GA GVK+ SGR+NGA+++R E EG +P
Sbjct: 121 VLANEVVELLEARTPLRMVMKKTIKKAMYSGARGVKIQVSGRINGADMARIESCTEGEIP 180
Query: 175 LQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
TLRA I+Y VA T YG G+KV+V+
Sbjct: 181 CSTLRADIEYCYRVARTTYGVLGVKVWVNRG 211
>gi|218176279|ref|YP_002364536.1| ribosomal protein S3 [Festuca arundinacea]
gi|215882363|gb|ACJ70793.1| ribosomal protein S3 [Festuca arundinacea]
Length = 239
Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats.
Identities = 76/240 (31%), Positives = 124/240 (51%), Gaps = 34/240 (14%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR-GSEYGALLHEDLKIREYLQCHLKQAG-------- 51
MGQKINP+ FRLG N+ F R Y L ED KIR+ ++ ++++
Sbjct: 1 MGQKINPLGFRLGTTPK-NTIPFGRTPKNYSEGLQEDKKIRDCIKNYIQKNRKKSSNRKL 59
Query: 52 -----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKI 87
+ +I I++ +I++ P L+ K ++EK
Sbjct: 60 ESDSSSEVITHNRKNDSGSSSEVITRIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKD 119
Query: 88 RKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGAD 147
+K + N +++S+ +V +P ++A+ IA QL+ RV FR+AMK+A++ +
Sbjct: 120 LQKEIHSVNQGLNISIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAMELTKKADIK 179
Query: 148 GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
GVKV +GRL G E++R EC +GR+PLQT+RA IDY T YG G+K+++ + +E
Sbjct: 180 GVKVKIAGRLGGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLGVKIWIFVDEE 239
>gi|307128711|ref|YP_003880741.1| 30S ribosomal protein S3 [Candidatus Sulcia muelleri CARI]
gi|306483173|gb|ADM90043.1| 30S ribosomal protein S3 [Candidatus Sulcia muelleri CARI]
Length = 225
Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats.
Identities = 87/215 (40%), Positives = 137/215 (63%), Gaps = 5/215 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ--AGVAKILIE 58
MG K+N + RLG+ W S W + Y + ED KIR+Y++ L + +++I IE
Sbjct: 1 MGHKVNTLSNRLGLIVGWQSIWCS---NYPDRIKEDFKIRKYIENRLPKPKIYISRIYIE 57
Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQ 118
RT I + ++RP +IIGK G +IEKI+K++ + T EI +++ E+ KPE++A L+++
Sbjct: 58 RTLNRINITISTSRPAIIIGKGGDEIEKIKKEIEHFTYKEIKINIFEIKKPELDAVLVSK 117
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
SIA++LE + +++++K + SA+R A+G+K+ SGRLNGAE++RTE Y EGR+PL T
Sbjct: 118 SIARKLESKSSYKKSIKICISSALRLNAEGIKIKISGRLNGAEMARTETYKEGRIPLSTF 177
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
RA IDY + T YG GIKV++ +
Sbjct: 178 RADIDYYMTESHTDYGLIGIKVWIMKGEIYGKKKI 212
>gi|148645068|gb|ABR01059.1| RpsC [uncultured Geobacter sp.]
Length = 163
Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats.
Identities = 85/164 (51%), Positives = 126/164 (76%), Gaps = 1/164 (0%)
Query: 8 ILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRII 67
FRLGV TW+S+W+A ++Y LHED+ IR++L+ L +GV+KI IER +I
Sbjct: 1 NGFRLGVIKTWDSKWYAE-ADYAKFLHEDMAIRKFLKKRLYNSGVSKIEIERAANKTKIN 59
Query: 68 VYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERR 127
+++ARPGLIIGKKG+++E I+K+L+ +T+ EI + ++EV KPE++A L+A+++A QLERR
Sbjct: 60 IHTARPGLIIGKKGSEVETIKKELAALTSKEIFIKIHEVRKPELDAQLVAENVALQLERR 119
Query: 128 VVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEG 171
+ FRR MK++V SA++FGA G+++ SGRL GAE+SRTE Y EG
Sbjct: 120 IAFRRGMKKSVTSALKFGAKGIRITCSGRLGGAEMSRTEWYREG 163
>gi|297242963|ref|ZP_06926901.1| ribosomal protein S3 [Gardnerella vaginalis AMD]
gi|298253067|ref|ZP_06976859.1| ribosomal protein S3 [Gardnerella vaginalis 5-1]
gi|296889174|gb|EFH27908.1| ribosomal protein S3 [Gardnerella vaginalis AMD]
gi|297532462|gb|EFH71348.1| ribosomal protein S3 [Gardnerella vaginalis 5-1]
Length = 226
Score = 174 bits (441), Expect = 9e-42, Method: Composition-based stats.
Identities = 84/177 (47%), Positives = 121/177 (68%)
Query: 43 LQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLS 102
+ L++AGV++I+IERT R+ +++ARPG+IIG++G + E++R KL +T ++ L+
Sbjct: 1 MSHDLERAGVSRIVIERTRDRVRVDIHTARPGIIIGRRGAEAERVRAKLEKLTGKQVQLN 60
Query: 103 VNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAEL 162
+ EV ++A L+AQ IA+QL RV FRRAM++A Q AMR GA G+++ SGRL GAE+
Sbjct: 61 IFEVKNAALDAQLVAQGIAEQLTNRVTFRRAMRKAQQDAMRAGAKGIRIKLSGRLGGAEM 120
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
SR+E Y EGRVPLQTLRA IDYG A+T YG G+KV++ D A +
Sbjct: 121 SRSEFYREGRVPLQTLRALIDYGFFEAKTTYGRIGVKVWIYKGDMTEREFEEQQAQQ 177
>gi|67968328|dbj|BAE00228.1| ribosomal protein S3 [Selaginella uncinata]
Length = 225
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 68/224 (30%), Positives = 106/224 (47%), Gaps = 19/224 (8%)
Query: 2 GQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLK------------- 48
G+K NP+ RLG+ + W AR Y + ED ++R+ ++
Sbjct: 2 GRKTNPLGSRLGIAKNHHPNWSARPRIYSQYVQEDKQVRDCTDAYVHGQRVWNPAGSGGN 61
Query: 49 --QAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKI----RKKLSNMTNSEIHLS 102
G+ +++I R + ++ P ++I G IE+ ++ LS+ +H++
Sbjct: 62 SGAEGIERVVIRRKTDLPSVETHAGPPAVLIRSHGRGIEQSRMNVQQNLSDSRIGRVHIA 121
Query: 103 VNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAEL 162
E P A+ +A Q RV FRR K+A++ A + G G+K +GR NGAE+
Sbjct: 122 SAETSGPYGEPNTPAKYMASQPGNRVAFRRTTKKAIEPARKSGRKGIKTQIAGRPNGAEI 181
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
+R E EGRVP QT RA IDY A+T YG G KV +
Sbjct: 182 ARVEWAREGRVPPQTSRAQIDYRYYPAQTVYGVSGTKVRILRNG 225
>gi|323690439|gb|ADX99152.1| ribosomal protein S3 [Stachytarpheta cayennensis]
Length = 195
Score = 171 bits (434), Expect = 6e-41, Method: Composition-based stats.
Identities = 62/193 (32%), Positives = 112/193 (58%), Gaps = 11/193 (5%)
Query: 26 GSEYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLII 77
Y L ED KIR++++ ++++ G+A+I I++ ++I++ P L+I
Sbjct: 1 PKNYSEGLQEDQKIRDFIKNYVQKNIRTSSGTEGIARIEIQKRIDLIQVIIFMGFPKLLI 60
Query: 78 GKKGT---DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM 134
+ +++ +K + N ++++++ + KP N ++A+ IA QL+ RV FR+AM
Sbjct: 61 ESRPRGVEELQMNLQKEFHYVNRKLNIAITRIAKPYENPNILAEFIAGQLKNRVSFRKAM 120
Query: 135 KRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
K+A++ + G++V +GR++G E++R E EGRVPLQT+RA IDY T YG
Sbjct: 121 KKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYTVRTIYG 180
Query: 195 SCGIKVYVSLRDE 207
GIK+++ L E
Sbjct: 181 VLGIKIWIFLDKE 193
>gi|298489090|ref|ZP_07007112.1| SSU ribosomal protein S3p (S3e) [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298156402|gb|EFH97500.1| SSU ribosomal protein S3p (S3e) [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 148
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 70/145 (48%), Positives = 96/145 (66%), Gaps = 4/145 (2%)
Query: 84 IEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMR 143
+ K+R+ L+ +H+++ E+ KPE++ L+AQS+AQQLERRV+FRRAMKRAVQ+AMR
Sbjct: 4 LRKLRQDLTKQMGVPVHINIEEIRKPELDGMLVAQSVAQQLERRVMFRRAMKRAVQNAMR 63
Query: 144 FGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
GA G+K+ SGRL GAE++RTE Y EGRVPL TLRA IDY A T YG G+KV++
Sbjct: 64 IGAKGIKIQVSGRLGGAEIARTEWYREGRVPLHTLRADIDYANYEAHTTYGVIGVKVWIF 123
Query: 204 LRDEVSDS----DSTIPAAEHRVVE 224
+ + PA + +
Sbjct: 124 KGEVIGGRQEELKPQAPAPRKKAAK 148
>gi|323690415|gb|ADX99140.1| ribosomal protein S3 [Neosparton ephedroides]
Length = 195
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 64/193 (33%), Positives = 114/193 (59%), Gaps = 11/193 (5%)
Query: 26 GSEYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLII 77
Y L ED KIR+ ++ ++++ G+A+I I++ ++I++ P L+I
Sbjct: 1 PKNYSEGLQEDQKIRDLIKNYVQKNIRTSSGAEGIARIEIQKRIDLIQVIIFMGFPKLLI 60
Query: 78 GKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM 134
+ IE+++ +K + N ++++++ + KP N ++A+ IA QL+ RV FR+AM
Sbjct: 61 ESRPRGIEELQMNLQKEFHYVNRKLNIAITRIAKPYGNPNILAEFIAGQLKNRVSFRKAM 120
Query: 135 KRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
K+A++ + G++V SGR++G E++R E EGRVPLQT+RA IDY + T YG
Sbjct: 121 KKAIELTEQADTKGIQVQISGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYG 180
Query: 195 SCGIKVYVSLRDE 207
GIK+++ + E
Sbjct: 181 VLGIKIWIFIDKE 193
>gi|323690435|gb|ADX99150.1| ribosomal protein S3 [Parodianthus ilicifolius]
Length = 195
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 63/193 (32%), Positives = 114/193 (59%), Gaps = 11/193 (5%)
Query: 26 GSEYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLII 77
+Y L ED KIR ++ ++++ G+A+I I++ ++I+ P L+I
Sbjct: 1 PKDYPEGLQEDQKIRALIKNYVQKNRRTSPGAEGIARIEIQKRIDLIQVIILMGFPKLLI 60
Query: 78 GKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM 134
+ IE+++ +K + N +I++++ + P + ++A+ IA+QL+ RV FR+AM
Sbjct: 61 ESRPRGIEELQMNLQKEFHYVNRKINIAITRIANPYGDPNILAEFIAEQLKNRVSFRKAM 120
Query: 135 KRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
K+A++ A + G++V +GR++G E++R E EGRVPLQT+RA IDY + T YG
Sbjct: 121 KKAIELAEQADTKGIQVQIAGRIDGKEIARVEWMREGRVPLQTIRAKIDYCSYTVRTIYG 180
Query: 195 SCGIKVYVSLRDE 207
GIK+++ + E
Sbjct: 181 VLGIKIWIFIDKE 193
>gi|255017222|ref|ZP_05289348.1| 30S ribosomal protein S3 [Listeria monocytogenes FSL F2-515]
Length = 194
Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 64/151 (42%), Positives = 105/151 (69%), Gaps = 1/151 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI R+GV W+S+W+A +Y LHEDL+IR+Y+ L A V+++ IER
Sbjct: 1 MGQKVHPIGMRIGVIRDWDSKWYAE-KDYADFLHEDLRIRDYVAKRLSDASVSRVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG++IGK G+++E +RK L+ +T +H+++ E+ + +++A L+A++I
Sbjct: 60 ANRVNITIHTAKPGMVIGKGGSEVEALRKNLNELTKKRVHINIVEIKRADLDAKLVAENI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKV 151
A+QLE RV FRRA K+A+Q MR G K+
Sbjct: 120 ARQLEGRVSFRRAQKQAIQRTMRAGQKVSKL 150
>gi|323690417|gb|ADX99141.1| ribosomal protein S3 [Lampayo castellani]
Length = 195
Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 64/193 (33%), Positives = 114/193 (59%), Gaps = 11/193 (5%)
Query: 26 GSEYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLII 77
Y L ED KIR+ ++ ++++ G+A+I I++ ++I++ P L+I
Sbjct: 1 PKNYSEGLQEDQKIRDLIKNYVQKNIRTSSGAEGIARIEIQKRIDLIQVIIFMGFPKLLI 60
Query: 78 GKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM 134
+ IE+++ +K + N ++++++ + KP N ++A+ IA QL+ RV FR+AM
Sbjct: 61 ESRPRGIEELQINLQKEFHYVNRKLNIAITRIAKPYGNPNILAEFIAGQLKNRVSFRKAM 120
Query: 135 KRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
K+A++ + G++V SGR++G E++R E EGRVPLQT+RA IDY + T YG
Sbjct: 121 KKAIELTEQADTKGIQVQISGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYG 180
Query: 195 SCGIKVYVSLRDE 207
GIK+++ + E
Sbjct: 181 VLGIKIWIFIDKE 193
>gi|321310974|ref|YP_004193303.1| 30S ribosomal protein S3 [Mycoplasma haemofelis str. Langford 1]
gi|319802818|emb|CBY93464.1| ribosomal protein S3 [Mycoplasma haemofelis str. Langford 1]
Length = 244
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 86/235 (36%), Positives = 126/235 (53%), Gaps = 9/235 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYG-ALLHEDLKIREYLQCHLKQAGVAKILIER 59
MGQK+NP R G+N W SRW + L ED K+R+ L+ ++AGVA I IER
Sbjct: 1 MGQKVNPNSLRFGLNKNWVSRWNSPNRSMSIKWLLEDEKVRKVLKERCRKAGVALIEIER 60
Query: 60 THKNCR-----IIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS--EIHLSVNEVPKPEIN 112
I ++ A+PGLI+ ++ I K L + E+ + + E+ P ++
Sbjct: 61 FSNFGEKVTVFIYLHLAQPGLILSNDK-ELSLINKDLRIILGKSVEVKMDIKELKNPAVS 119
Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172
A +I Q + +E RV R +KR ++ AM GA GVKV SGR+NG E++R E Y +G
Sbjct: 120 AEIIGQEVVDAIENRVPHRLVIKRLMKRAMMAGALGVKVKLSGRINGVEIARNEAYSDGS 179
Query: 173 VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
+PL TLRA IDY +A+ YG G+KV+V+ +P+A + DS
Sbjct: 180 IPLSTLRADIDYSFQIAKRDYGVLGVKVWVNRGLYFGRYFMPLPSAAKAKSKGDS 234
>gi|197131506|gb|ACH47271.1| ribosomal protein S3 [Sarcocaulon vanderietiae]
Length = 243
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 64/234 (27%), Positives = 116/234 (49%), Gaps = 31/234 (13%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
M +KINP+ FRLG N +S WF + Y L ED +IR+ ++ +
Sbjct: 1 MARKINPLGFRLGTNQNHHSVWFEQPKNYCKGLQEDKRIRDCIKNFIDNRRKKSEPMKNL 60
Query: 52 VAKILIERTHKN----CRIIVYSARPGLIIGKKGTDIEKIRKKLSN-------------- 93
+ +I IE++ K +I++ L K +K +
Sbjct: 61 ITRIQIEKSIKKQIHLTTVIIFMGFQELFEEKPKKRGKKEDELRHIKEFSELKVNVEKAL 120
Query: 94 ----MTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGV 149
N E+ + ++++ P + ++A+ +A L+ R+ FR+AM+R ++ + + GV
Sbjct: 121 DPNLRRNRELKVVISKIFNPFGDPNILAELLAHLLKTRIPFRKAMRRVIELSKKADIKGV 180
Query: 150 KVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
KV +GR++G +++R EC L+GRVPL T+RA ID+ + + +G GIK+++
Sbjct: 181 KVQIAGRIDGRDIARVECLLQGRVPLHTIRAKIDFCSTRVQMRFGVLGIKIWIF 234
>gi|307069687|ref|YP_003878164.1| 30S ribosomal subunit protein S3 [Candidatus Zinderia insecticola
CARI]
gi|306482947|gb|ADM89818.1| 30S ribosomal subunit protein S3 [Candidatus Zinderia insecticola
CARI]
Length = 201
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 69/205 (33%), Positives = 115/205 (56%), Gaps = 4/205 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI FRL +N W S W + + L D+ IR Y++ +L + + I+IE
Sbjct: 1 MGQKINPICFRLSINKNWKSSWCSNKKNFSKFLKIDILIRSYIKNNLDKYLINDIIIEHY 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ +++ L K +IEK+ ++ + + ++ ++NA IA SI
Sbjct: 61 NNKILTKIFTCSQKLF---KKNNIEKLESNINKNIFINKKIFLIKIKSSKLNAQYIANSI 117
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
+ +L++R++FR+ MK+ + + G+K++ SGRLNG E++R E Y G+VPL L A
Sbjct: 118 SLKLKKRILFRKIMKKYILK-LNNNIKGIKIMLSGRLNGIEIARKEWYSLGKVPLHKLSA 176
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLR 205
+IDYG + A+T YG KV++ +
Sbjct: 177 NIDYGFSEAKTNYGIISSKVWIYKK 201
>gi|323690427|gb|ADX99146.1| ribosomal protein S3 [Citharexylum ligustrinum]
Length = 195
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 67/193 (34%), Positives = 118/193 (61%), Gaps = 11/193 (5%)
Query: 26 GSEYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLII 77
Y L ED KIR++++ ++++ G+A+I I++ +II++ P L+I
Sbjct: 1 PKNYSEGLQEDQKIRDFIKNYVQKNTRTSSGAEGIARIKIQKRIDLIQIIIFMGFPKLLI 60
Query: 78 GKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM 134
+ IE+++ +K + N ++++++ + KP + ++A+ IA+QL+ RV FR+AM
Sbjct: 61 ESRPRGIEELQMNLQKEFHYVNRKLNIAIKRIAKPYGSPNILAEFIAEQLKNRVSFRKAM 120
Query: 135 KRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
KRA++ A + G++V +GRLNG E++R E EGRVPLQT+RA IDY + T YG
Sbjct: 121 KRAIELAKQADTKGIQVQMAGRLNGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYG 180
Query: 195 SCGIKVYVSLRDE 207
GIK+++ + +E
Sbjct: 181 VLGIKIWIFIDNE 193
>gi|323690399|gb|ADX99132.1| ribosomal protein S3 [Phyla lanceolata]
Length = 195
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 64/193 (33%), Positives = 114/193 (59%), Gaps = 11/193 (5%)
Query: 26 GSEYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLII 77
Y L ED KIR+ +Q ++++ G+A+I I++ ++I++ P L+I
Sbjct: 1 PKNYSQGLQEDQKIRDLIQNYVQKNIRTSSGAEGIARIEIQKRIDLIQVIIFMGFPKLLI 60
Query: 78 GKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM 134
+ IE+++ +K + N ++++++ + KP N ++A+ IA QL+ RV FR+AM
Sbjct: 61 ENRPRGIEELQMNLQKEFHYVNRKLNIAILRIAKPYGNPQILAEFIAGQLKNRVSFRKAM 120
Query: 135 KRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
K+A++ + G++V +GR++G E++R E EGRVPLQT+RA IDY + T YG
Sbjct: 121 KKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYG 180
Query: 195 SCGIKVYVSLRDE 207
GIK+++ + E
Sbjct: 181 VLGIKIWIFIDKE 193
>gi|323690409|gb|ADX99137.1| ribosomal protein S3 [Junellia juniperina]
Length = 195
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 65/193 (33%), Positives = 114/193 (59%), Gaps = 11/193 (5%)
Query: 26 GSEYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLII 77
Y L ED KIR+ +Q ++++ G+A+I I++ ++I++ P L+I
Sbjct: 1 PKNYSQGLQEDQKIRDLIQNYVQKNIRTSSGAEGIARIEIQKRIDLIQVIIFMGFPKLLI 60
Query: 78 GKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM 134
K IE+++ +K + N ++++++ + KP N ++A+ IA QL+ RV FR+AM
Sbjct: 61 ESKPRGIEELQMNLQKEFHYVNRKLNIAITRIAKPYGNPNILAEFIAGQLKNRVSFRKAM 120
Query: 135 KRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
K+A++ + G++V +GR++G E++R E EGRVPLQT+RA IDY + T YG
Sbjct: 121 KKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYG 180
Query: 195 SCGIKVYVSLRDE 207
GIK+++ + E
Sbjct: 181 VLGIKIWIFIDKE 193
>gi|323690413|gb|ADX99139.1| ribosomal protein S3 [Dipyrena glaberrima]
Length = 195
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 64/193 (33%), Positives = 114/193 (59%), Gaps = 11/193 (5%)
Query: 26 GSEYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLII 77
Y L ED KIR+ +Q ++++ G+A+I I++ ++I++ P L+I
Sbjct: 1 PKNYSQGLQEDQKIRDLIQNYVQKNIRTSSGAEGIARIEIQKRIDLIQVIIFMGFPKLLI 60
Query: 78 GKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM 134
+ IE+++ +K + N ++++++ + KP N ++A+ IA QL+ RV FR+AM
Sbjct: 61 ESRPRGIEELQMNLQKEFHYVNRKLNIAITRIAKPYGNPNILAEFIAGQLKNRVSFRKAM 120
Query: 135 KRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
K+A++ + G++V +GR++G E++R E EGRVPLQT+RA IDY + T YG
Sbjct: 121 KKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYG 180
Query: 195 SCGIKVYVSLRDE 207
GIK+++ + E
Sbjct: 181 VLGIKIWIFIDKE 193
>gi|323690419|gb|ADX99142.1| ribosomal protein S3 [Diostea juncea]
Length = 195
Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats.
Identities = 64/193 (33%), Positives = 114/193 (59%), Gaps = 11/193 (5%)
Query: 26 GSEYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLII 77
Y L ED KIR+ ++ ++++ G+A+I I++ ++I++ P L+I
Sbjct: 1 PKNYSEGLQEDQKIRDLIKNYVQKNIRTSSGAEGIARIEIQKRIDLIQVIIFMGFPKLLI 60
Query: 78 GKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM 134
+ IE+++ +K + N ++++++ + KP N ++A+ IA QL+ RV FR+AM
Sbjct: 61 ESRPRGIEELQMNLQKEFHYVNRKLNIAITRIAKPYGNPNILAEFIAGQLKNRVSFRKAM 120
Query: 135 KRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
K+A++ + G++V SGR++G E++R E EGRVPLQT+RA IDY + T YG
Sbjct: 121 KKAIELTEQADTKGIQVQISGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYG 180
Query: 195 SCGIKVYVSLRDE 207
GIK+++ + E
Sbjct: 181 VLGIKIWILIDKE 193
>gi|323690443|gb|ADX99154.1| ribosomal protein S3 [Recordia boliviana]
Length = 193
Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats.
Identities = 63/191 (32%), Positives = 116/191 (60%), Gaps = 11/191 (5%)
Query: 28 EYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLIIGK 79
Y L ED KIR++++ ++++ G+A+I I++ ++I++ P L+I
Sbjct: 1 NYSEGLQEDQKIRDFIKNYVQKNMRTSSGTEGIARIEIQKRIDLIQVIIFMGFPRLLIES 60
Query: 80 KGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKR 136
+ IE+++ +K + N ++++++ ++ KP N ++A+ IA QL+ RV FR+AMK+
Sbjct: 61 RPRGIEELQMNLQKEFHYVNRKLNIAITKIAKPYGNPNILAEFIAGQLKNRVSFRKAMKK 120
Query: 137 AVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196
A++ + G++V +GR++G E++R E EGRVPLQT+RA IDY + T YG
Sbjct: 121 AIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYGVL 180
Query: 197 GIKVYVSLRDE 207
GIK+++ + E
Sbjct: 181 GIKIWIFIDKE 191
>gi|240018144|gb|ACS44453.1| Rps3 [Arundinella hirta]
gi|240018146|gb|ACS44454.1| Rps3 [Arundinella hirta var. ciliata]
Length = 205
Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats.
Identities = 67/205 (32%), Positives = 108/205 (52%), Gaps = 17/205 (8%)
Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VA 53
FRLG +S WFA+ Y L ED KIR ++ ++++ +
Sbjct: 1 FRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKMESDSSSEVIT 60
Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEIN 112
I I++ +I++ P L+ K ++EK +K N N +++++ +V +P
Sbjct: 61 HIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEVNSVNQRLNIAIEKVKEPYRQ 120
Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172
++A+ IA QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR
Sbjct: 121 PNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGVKIQIAGRLAGKEIARAECIKKGR 180
Query: 173 VPLQTLRAHIDYGTAVAETAYGSCG 197
+PLQT+RA IDY T YG G
Sbjct: 181 LPLQTIRAKIDYCCYPIRTIYGVLG 205
>gi|240018178|gb|ACS44470.1| Rps3 [Imperata cylindrica var. major]
Length = 205
Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats.
Identities = 66/205 (32%), Positives = 108/205 (52%), Gaps = 17/205 (8%)
Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VA 53
FRLG +S WFA+ Y L ED KIR ++ ++++ +
Sbjct: 1 FRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKMESDSSSEVIT 60
Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEIN 112
I I++ +I++ P L+ K ++EK +K N N +++++ +V +P
Sbjct: 61 HIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEVNSVNRRLNIAIEKVKEPYRQ 120
Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172
++A+ IA QL+ RV FR+AMK+A++ + G+K+ +GRL G E++R EC +GR
Sbjct: 121 PNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGIKIQIAGRLAGKEIARAECIKKGR 180
Query: 173 VPLQTLRAHIDYGTAVAETAYGSCG 197
+PLQT+RA IDY T YG G
Sbjct: 181 LPLQTIRAKIDYCCYPIRTIYGVLG 205
>gi|323690403|gb|ADX99134.1| ribosomal protein S3 [Acantholippia salsoloides]
Length = 195
Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats.
Identities = 62/193 (32%), Positives = 112/193 (58%), Gaps = 11/193 (5%)
Query: 26 GSEYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLII 77
Y L ED KIR+ +Q ++++ G+A+I I++ ++I++ P L+I
Sbjct: 1 PKNYSQGLQEDQKIRDLIQNYVQKNIRTSSGTEGIARIEIQKRIDLIQVIIFMGFPKLLI 60
Query: 78 GKKGT---DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM 134
+ +++ +K + N ++++++ + KP N ++A+ IA QL+ RV FR+AM
Sbjct: 61 ESRPRGVEELQMNLQKEFHYVNRKLNIAIIRIAKPYGNPNILAEFIAGQLKNRVSFRKAM 120
Query: 135 KRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
K+A++ + G++V +GR++G E++R E EGRVPLQT+RA IDY + T YG
Sbjct: 121 KKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYG 180
Query: 195 SCGIKVYVSLRDE 207
GIK+++ + E
Sbjct: 181 VLGIKIWIFIDKE 193
>gi|323690411|gb|ADX99138.1| ribosomal protein S3 [Mulguraea aspera]
Length = 195
Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats.
Identities = 65/193 (33%), Positives = 113/193 (58%), Gaps = 11/193 (5%)
Query: 26 GSEYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLII 77
Y L ED KIR +Q ++++ G+A+I I++ ++I++ P L+I
Sbjct: 1 PKNYSQGLQEDQKIRNLIQNYVQKNIRTSSGAEGIARIEIQKRIDLIQVIIFMGFPKLLI 60
Query: 78 GKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM 134
K IE+++ +K + N ++++++ + KP N ++A+ IA QL+ RV FR+AM
Sbjct: 61 ESKPRGIEELQINLQKEFHYVNRKLNIAITRIVKPYGNPNILAEFIAGQLKNRVSFRKAM 120
Query: 135 KRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
K+A++ + G++V +GR++G E++R E EGRVPLQT+RA IDY + T YG
Sbjct: 121 KKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYG 180
Query: 195 SCGIKVYVSLRDE 207
GIK+++ + E
Sbjct: 181 VLGIKIWIFIDKE 193
>gi|240018152|gb|ACS44457.1| Rps3 [Cymbopogon goeringii]
gi|240018180|gb|ACS44471.1| Rps3 [Ischaemum anthephoroides]
gi|240018182|gb|ACS44472.1| Rps3 [Ischaemum aristatum var. glaucum]
gi|240018194|gb|ACS44478.1| Rps3 [Phacelurus latifolius]
gi|240018216|gb|ACS44489.1| Rps3 [Spodiopogon cotulifer]
gi|240018222|gb|ACS44492.1| Rps3 [Themeda triandra var. japonica]
Length = 205
Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats.
Identities = 66/205 (32%), Positives = 108/205 (52%), Gaps = 17/205 (8%)
Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VA 53
FRLG +S WFA+ Y L ED KIR ++ ++++ +
Sbjct: 1 FRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKMESDSSSEVIT 60
Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEIN 112
I I++ +I++ P L+ K ++EK +K N N +++++ +V +P
Sbjct: 61 HIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEVNSVNQRLNIAIEKVKEPYRQ 120
Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172
++A+ IA QL+ RV FR+AMK+A++ + G+K+ +GRL G E++R EC +GR
Sbjct: 121 PNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGIKIQIAGRLAGKEIARAECIKKGR 180
Query: 173 VPLQTLRAHIDYGTAVAETAYGSCG 197
+PLQT+RA IDY T YG G
Sbjct: 181 LPLQTIRAKIDYCCYPIRTIYGVLG 205
>gi|12545437|ref|NP_074987.1| ribosomal protein S3 [Euglena longa]
gi|14285746|sp|P58133|RR3_ASTLO RecName: Full=Plastid 30S ribosomal protein S3
gi|12329901|emb|CAC24598.1| ribosomal protein S3 [Euglena longa]
Length = 219
Score = 167 bits (424), Expect = 7e-40, Method: Composition-based stats.
Identities = 63/219 (28%), Positives = 105/219 (47%), Gaps = 15/219 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP R G S W+ Y + +D+ IR++L +K ++ I IE+
Sbjct: 1 MGQKTNPNGLRFGKFKKHFSCWYTENKNYSHFVKQDIFIRKFLMEKIKNVFISLIEIEKD 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKK---------------LSNMTNSEIHLSVNE 105
+K I ++ + + + +E + + E
Sbjct: 61 NKETVIFIHYLNFSKFNKVETNSEKNEINLFKLKNLLLKSLNSFFNVKINFNEFIIKLIE 120
Query: 106 VPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRT 165
+ P ++ IA I +LE+R+ FR+ + + + + G G+K+ SGRLN AE++R
Sbjct: 121 IENPILDVRFIANDIRYKLEKRMNFRKIVNSTIANIINKGIKGIKIKLSGRLNDAEMARE 180
Query: 166 ECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
E + EG+VPL TL+A+IDY A+T GS GIKV+++
Sbjct: 181 ESFREGKVPLNTLKANIDYFHCTAKTLSGSLGIKVWLNK 219
>gi|323690393|gb|ADX99129.1| ribosomal protein S3 [Lippia salviifolia]
gi|323690397|gb|ADX99131.1| ribosomal protein S3 [Lippia integrifolia]
Length = 195
Score = 167 bits (424), Expect = 8e-40, Method: Composition-based stats.
Identities = 64/193 (33%), Positives = 114/193 (59%), Gaps = 11/193 (5%)
Query: 26 GSEYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLII 77
Y L ED KIR+ +Q ++++ G+A+I I++ ++I++ P L+I
Sbjct: 1 PKNYSQGLQEDQKIRDLIQNYVQKNIRTSSGAEGIARIEIQKRIDLIQVIIFMGFPKLLI 60
Query: 78 GKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM 134
+ IE+++ +K + N ++++++ + KP N ++A+ IA QL+ RV FR+AM
Sbjct: 61 ENRPRGIEELQMNLQKEFHYVNRKLNIAILRIAKPYGNPKILAEFIAGQLKNRVSFRKAM 120
Query: 135 KRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
K+A++ + G++V +GR++G E++R E EGRVPLQT+RA IDY + T YG
Sbjct: 121 KKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYG 180
Query: 195 SCGIKVYVSLRDE 207
GIK+++ + E
Sbjct: 181 VLGIKIWIFIDKE 193
>gi|240018192|gb|ACS44477.1| Rps3 [Pennisetum alopecuroides var. alopecuroides]
Length = 205
Score = 167 bits (424), Expect = 8e-40, Method: Composition-based stats.
Identities = 68/205 (33%), Positives = 108/205 (52%), Gaps = 17/205 (8%)
Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VA 53
FRLG +S WFA+ Y L ED KIR ++ +++Q +
Sbjct: 1 FRLGTTQNHHSFWFAQPKNYSEGLQEDQKIRNCIKNYIQQNRKKGSNRKIESDSSSEVIT 60
Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEIN 112
I I++ +I++ P L+ K ++EK +K N N +++++ +V +P
Sbjct: 61 HIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEVNSVNQRLNIAIEKVKEPYRQ 120
Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172
++A+ IA QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR
Sbjct: 121 PNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLAGKEIARAECIKKGR 180
Query: 173 VPLQTLRAHIDYGTAVAETAYGSCG 197
+PLQT+RA IDY T YG G
Sbjct: 181 LPLQTIRAKIDYCCYPIRTIYGVLG 205
>gi|323690437|gb|ADX99151.1| ribosomal protein S3 [Bouchea fluminensis]
Length = 193
Score = 167 bits (424), Expect = 9e-40, Method: Composition-based stats.
Identities = 63/191 (32%), Positives = 114/191 (59%), Gaps = 11/191 (5%)
Query: 28 EYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLIIGK 79
Y L ED KIR++++ ++++ G+A+I I++ ++I++ P L+I
Sbjct: 1 NYSEGLQEDQKIRDFIKNYVQKNIRTASGTEGIARIEIQKRIDLIQVIIFMGFPKLLIES 60
Query: 80 KGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKR 136
+ IE+++ +K + N ++++++ + KP N ++A+ IA QL+ RV FR+AMK+
Sbjct: 61 RPRGIEELQMNLQKEFHYVNRKLNIAITRIAKPYENPNILAEFIAGQLKNRVSFRKAMKK 120
Query: 137 AVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196
A++ + G++V +GR++G E++R E EGRVPLQT+RA IDY T YG
Sbjct: 121 AIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCCYTVRTIYGVL 180
Query: 197 GIKVYVSLRDE 207
GIK+++ + E
Sbjct: 181 GIKIWIFIDKE 191
>gi|240018212|gb|ACS44487.1| Rps3 [Pennisetum glaucum]
Length = 205
Score = 167 bits (424), Expect = 9e-40, Method: Composition-based stats.
Identities = 68/205 (33%), Positives = 109/205 (53%), Gaps = 17/205 (8%)
Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VA 53
FRLG +S WFA+ Y L ED KIR ++ +++Q +
Sbjct: 1 FRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQQNRKKGSNRKIESDSSSEVIT 60
Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEIN 112
+I I++ +I++ P L+ K ++EK +K N N +++++ +V +P
Sbjct: 61 RIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEVNSVNQRLNIAIEKVKEPYRQ 120
Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172
++A+ IA QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR
Sbjct: 121 PNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLAGKEIARAECIKKGR 180
Query: 173 VPLQTLRAHIDYGTAVAETAYGSCG 197
+PLQT+RA IDY T YG G
Sbjct: 181 LPLQTIRAKIDYCCYPIRTIYGVLG 205
>gi|323690401|gb|ADX99133.1| ribosomal protein S3 [Xeroaloysia ovatifolia]
Length = 195
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 64/193 (33%), Positives = 114/193 (59%), Gaps = 11/193 (5%)
Query: 26 GSEYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLII 77
Y L ED KIR+ +Q ++++ G+A+I I++ ++I++ P L+I
Sbjct: 1 PKNYSQGLQEDQKIRDLIQNYVQKNIRTSSGAEGIARIEIQKRIDLIQVIIFMGFPKLLI 60
Query: 78 GKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM 134
+ IE+++ +K + N ++++++ + KP N ++A+ IA QL+ RV FR+AM
Sbjct: 61 ESRPRGIEELQMNLQKEFHYVNRKLNIAILRIAKPYGNPKILAEFIAGQLKNRVSFRKAM 120
Query: 135 KRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
K+A++ + G++V +GR++G E++R E EGRVPLQT+RA IDY + T YG
Sbjct: 121 KKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYG 180
Query: 195 SCGIKVYVSLRDE 207
GIK+++ + E
Sbjct: 181 VLGIKIWIFIDKE 193
>gi|323690433|gb|ADX99149.1| ribosomal protein S3 [Tamonea boxiana]
Length = 196
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 63/194 (32%), Positives = 116/194 (59%), Gaps = 12/194 (6%)
Query: 26 GSEYGALLHEDLKIREYLQCHLKQ---------AGVAKILIERTHKNCRIIVYSARPGLI 76
Y L ED KIR++++ ++++ G+A+I I++ ++I++ P +
Sbjct: 1 PKNYSEGLQEDQKIRDFIKNYVQKKNRRTSSGTGGIARIEIQKRIDLIQVIIFMGFPKSL 60
Query: 77 IGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRA 133
I + IE+++ +K + N ++++++ + KP N ++A+ IA+QL+ RV FR+A
Sbjct: 61 IESRPRGIEELQMNLQKEFHYVNQKLNIAITRIAKPYGNPNILAEFIAKQLKNRVSFRKA 120
Query: 134 MKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAY 193
MKRA++ + + G++V +GR++G E++R E EGRVPLQT+RA IDY + T Y
Sbjct: 121 MKRAIELSEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIY 180
Query: 194 GSCGIKVYVSLRDE 207
G GIK+++ + E
Sbjct: 181 GVLGIKIWIFIDKE 194
>gi|323690423|gb|ADX99144.1| ribosomal protein S3 [Priva cordifolia]
Length = 195
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 64/193 (33%), Positives = 113/193 (58%), Gaps = 11/193 (5%)
Query: 26 GSEYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLII 77
Y L ED KIR++++ ++++ G+A+I I++T R+I++ P L+I
Sbjct: 1 PKYYSEGLQEDQKIRDFIKNYVQKNIKTSSGAEGIARIEIQKTIDLIRVIIFMGFPKLLI 60
Query: 78 GKKGTDIEKIRKKLSN---MTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM 134
+ I++++ L N ++ +++ + KP N T++A+ IA QL+ RV FR+AM
Sbjct: 61 ENRPRAIKELQMNLEKEFHYVNRKLTIAITRIAKPYGNPTILAEFIAGQLKNRVSFRKAM 120
Query: 135 KRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
K+A++ + G++V +GR+ G E++R E EGRVPLQT+RA +DY + T YG
Sbjct: 121 KKAIELTEQADTKGIQVQLAGRIGGKEIARVEWMREGRVPLQTIRAKMDYCSYPVRTIYG 180
Query: 195 SCGIKVYVSLRDE 207
GIK+++ + E
Sbjct: 181 VLGIKIWIFIDKE 193
>gi|240018172|gb|ACS44467.1| Rps3 [Eragrostis multicaulis]
Length = 205
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 67/205 (32%), Positives = 108/205 (52%), Gaps = 17/205 (8%)
Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VA 53
FRLG +S WFA+ Y L ED KIR ++ ++++ +
Sbjct: 1 FRLGTTQNHHSCWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVIT 60
Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEIN 112
I I++ +I++ P L+ K ++EK +K N N +++++ +V +P
Sbjct: 61 HIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQ 120
Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172
++A+ IA QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR
Sbjct: 121 PNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGR 180
Query: 173 VPLQTLRAHIDYGTAVAETAYGSCG 197
+PLQT+RA IDY T YG G
Sbjct: 181 LPLQTIRAKIDYCCYPIRTIYGVLG 205
>gi|240018218|gb|ACS44490.1| Rps3 [Sporobolus elongatus]
Length = 205
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 68/205 (33%), Positives = 108/205 (52%), Gaps = 17/205 (8%)
Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VA 53
FRLG +S WFA+ Y L ED KIR ++ ++++ +
Sbjct: 1 FRLGTTQNHHSFWFAQPKNYSEDLQEDKKIRNCIKNYIQKNRKKSSNRKIESDASSEVIT 60
Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEIN 112
I I++ +I++ P L+ K ++EK KK N N +++++ +V +P
Sbjct: 61 HIEIQKQIDTINVIIHIGFPNLLKKKGAIEELEKDIKKEVNCVNKRLNIAIEKVKEPYRQ 120
Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172
++A+ IA QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR
Sbjct: 121 PNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGR 180
Query: 173 VPLQTLRAHIDYGTAVAETAYGSCG 197
+PLQT+RA IDY T YG G
Sbjct: 181 LPLQTIRAKIDYCCYPIRTIYGVLG 205
>gi|240018206|gb|ACS44484.1| Rps3 [Setaria viridis subsp. pycnocoma]
gi|240018208|gb|ACS44485.1| Rps3 [Setaria chondrachne]
gi|240018210|gb|ACS44486.1| Rps3 [Setaria faberi]
gi|240018214|gb|ACS44488.1| Rps3 [Setaria verticillata]
Length = 205
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 68/205 (33%), Positives = 108/205 (52%), Gaps = 17/205 (8%)
Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VA 53
FRLG +S WFA+ Y L ED KIR ++ +++Q +
Sbjct: 1 FRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQQNRKKGSNRKIESDSSSEVIT 60
Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEIN 112
I I++ +I++ P L+ K ++EK +K N N +++++ +V +P
Sbjct: 61 HIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEVNSVNQRLNIAIEKVKEPYRQ 120
Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172
++A+ IA QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR
Sbjct: 121 PNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLAGKEIARAECIKKGR 180
Query: 173 VPLQTLRAHIDYGTAVAETAYGSCG 197
+PLQT+RA IDY T YG G
Sbjct: 181 LPLQTIRAKIDYCCYPIRTIYGVLG 205
>gi|323690445|gb|ADX99155.1| ribosomal protein S3 [Petrea volubilis]
Length = 195
Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 62/193 (32%), Positives = 114/193 (59%), Gaps = 11/193 (5%)
Query: 26 GSEYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLII 77
Y L ED KIR++++ ++++ G+A I I++ ++I++ P L+I
Sbjct: 1 PKNYSEGLQEDQKIRDFIKNYVQKNMRISSGAEGIAHIEIQKRIDLIQVIIFMGFPKLLI 60
Query: 78 GKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM 134
+ IE+++ +K + N ++++++ + KP N ++A+ IA QL+ RV FR+A+
Sbjct: 61 ENRPRGIEELQMNLQKEFHYVNRKLNIAIKRIAKPYGNPNILAEFIAGQLKNRVSFRKAI 120
Query: 135 KRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
K+A++ + G++V +GR++G E++R E EGRVPLQT+RA IDY + T YG
Sbjct: 121 KKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAQIDYCSYTVRTIYG 180
Query: 195 SCGIKVYVSLRDE 207
GIK+++ + E
Sbjct: 181 VLGIKIWIFIDKE 193
>gi|240018158|gb|ACS44460.1| Rps3 [Digitaria ciliaris]
gi|240018160|gb|ACS44461.1| Rps3 [Digitaria radicosa]
Length = 205
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 67/205 (32%), Positives = 109/205 (53%), Gaps = 17/205 (8%)
Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VA 53
FRLG +S WFA+ Y L ED KIR ++ ++++ +
Sbjct: 1 FRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIESDSSSEVIT 60
Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEIN 112
I I++ +I++ P L+ K+ ++EK +K N N +++++ +V +P
Sbjct: 61 HIEIQKEIDTIHVIIHIGFPNLLKKKEAIEELEKDLQKEVNSVNQRLNIAIEKVKEPYRQ 120
Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172
++A+ IA QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR
Sbjct: 121 PNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLAGKEIARAECIKKGR 180
Query: 173 VPLQTLRAHIDYGTAVAETAYGSCG 197
+PLQT+RA IDY T YG G
Sbjct: 181 LPLQTIRAKIDYCCYPIRTIYGVLG 205
>gi|323690407|gb|ADX99136.1| ribosomal protein S3 [Verbena officinalis]
Length = 193
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 65/191 (34%), Positives = 114/191 (59%), Gaps = 11/191 (5%)
Query: 28 EYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLIIGK 79
Y L ED KIR+ +Q ++++ G+A+I I++ ++I++ P L+I
Sbjct: 1 NYSQGLQEDQKIRDLIQNYVQKNIRTSSGAEGIARIEIQKRIDLIQVIIFMGFPKLLIES 60
Query: 80 KGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKR 136
K IE+++ +K + N ++++++ + KP N ++A+ IA QL+ RV FR+AMK+
Sbjct: 61 KPRGIEELQMNLQKEFHYVNRKLNIAITRIAKPYGNPNILAEFIAGQLKNRVSFRKAMKK 120
Query: 137 AVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196
A++ + G++V +GR++G E++R E EGRVPLQT+RA IDY + T YG
Sbjct: 121 AIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYGVL 180
Query: 197 GIKVYVSLRDE 207
GIK+++ + E
Sbjct: 181 GIKIWIFIDKE 191
>gi|240018162|gb|ACS44462.1| Rps3 [Echinochloa crus-galli var. crus-galli]
gi|240018164|gb|ACS44463.1| Rps3 [Echinochloa oryzicola]
gi|240018166|gb|ACS44464.1| Rps3 [Echinochloa crus-galli var. praticola]
Length = 205
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 67/205 (32%), Positives = 108/205 (52%), Gaps = 17/205 (8%)
Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VA 53
FRLG +S WFA+ Y L ED KIR ++ ++++ +
Sbjct: 1 FRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIESDSSSEVIT 60
Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEIN 112
I I++ +I++ P L+ K ++EK +K N N +++++ +V +P
Sbjct: 61 HIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEVNSVNQRLNIAIEKVKEPYRQ 120
Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172
++A+ IA QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR
Sbjct: 121 PNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLAGKEIARAECIKKGR 180
Query: 173 VPLQTLRAHIDYGTAVAETAYGSCG 197
+PLQT+RA IDY T YG G
Sbjct: 181 LPLQTIRAKIDYCCYPIRTIYGVLG 205
>gi|323690421|gb|ADX99143.1| ribosomal protein S3 [Rhaphithamnus venustus]
Length = 195
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 63/193 (32%), Positives = 113/193 (58%), Gaps = 11/193 (5%)
Query: 26 GSEYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLII 77
Y L ED KIR+ ++ ++++ G+A+I I++ ++I++ P L+I
Sbjct: 1 PKNYSEGLQEDQKIRDLIKNYVQKNIRASSGAEGIARIEIQKRIDLIQVIIFMGFPKLLI 60
Query: 78 GKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM 134
+ IE+++ +K + N ++++++ + KP N ++A+ IA QL+ RV FR+AM
Sbjct: 61 ESRPQGIEELQMNLQKEFHYVNQKLNIAITRIAKPYGNPNILAEFIAGQLKNRVSFRKAM 120
Query: 135 KRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
K+A++ + G++V +GR++G E++R E EGRVPLQT+RA IDY + T YG
Sbjct: 121 KKAIELTEQADTKGIQVQIAGRIDGKEIARVEWMREGRVPLQTIRAKIDYCSYTVRTIYG 180
Query: 195 SCGIKVYVSLRDE 207
GIK++ + E
Sbjct: 181 VLGIKIWTFIDKE 193
>gi|240018168|gb|ACS44465.1| Rps3 [Eleusine indica]
gi|240018188|gb|ACS44475.1| Rps3 [Muhlenbergia huegelii]
Length = 205
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 67/205 (32%), Positives = 108/205 (52%), Gaps = 17/205 (8%)
Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VA 53
FRLG +S WFA+ Y L ED KIR ++ ++++ +
Sbjct: 1 FRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVIT 60
Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEIN 112
I I++ +I++ P L+ K ++EK +K N N +++++ +V +P
Sbjct: 61 HIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQ 120
Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172
++A+ IA QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR
Sbjct: 121 PNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGR 180
Query: 173 VPLQTLRAHIDYGTAVAETAYGSCG 197
+PLQT+RA IDY T YG G
Sbjct: 181 LPLQTIRAKIDYCCYPIRTIYGVLG 205
>gi|323690395|gb|ADX99130.1| ribosomal protein S3 [Lantana camara]
Length = 195
Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats.
Identities = 63/193 (32%), Positives = 114/193 (59%), Gaps = 11/193 (5%)
Query: 26 GSEYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLII 77
Y L ED KIR+ +Q ++++ G+A+I I++ ++I++ P L+I
Sbjct: 1 PKNYSQGLQEDQKIRDLIQNYVQKNIRTSSGAEGIARIEIQKRIDLIQVIIFMGFPKLLI 60
Query: 78 GKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM 134
+ IE+++ +K + N ++++++ + KP N ++A+ IA QL+ RV FR+AM
Sbjct: 61 ENRPRGIEELQMNLQKEFHYVNRKLNIAILRIAKPYGNPKILAEFIAGQLKNRVSFRKAM 120
Query: 135 KRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
K+A++ + G++V +GR++G E++R E EGRVPLQT+RA +DY + T YG
Sbjct: 121 KKAIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKMDYCSYTVRTIYG 180
Query: 195 SCGIKVYVSLRDE 207
GIK+++ + E
Sbjct: 181 VLGIKIWIFIDKE 193
>gi|153831343|ref|ZP_01984010.1| ribosomal protein S3 [Vibrio cholerae 623-39]
gi|148873177|gb|EDL71312.1| ribosomal protein S3 [Vibrio cholerae 623-39]
Length = 141
Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats.
Identities = 67/141 (47%), Positives = 99/141 (70%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WN+ WFA ++ L D K+R+YL L A +++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNATWFANTKDFADNLDGDFKVRQYLSKELANASLSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R ++ + +++ EV KPE++ L+A SI
Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDGQLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAVQSA 141
A QLERRV+FRRAMKRAVQ+A
Sbjct: 121 ASQLERRVMFRRAMKRAVQNA 141
>gi|47097197|ref|ZP_00234762.1| ribosomal protein S3 [Listeria monocytogenes str. 1/2a F6854]
gi|47014456|gb|EAL05424.1| ribosomal protein S3 [Listeria monocytogenes str. 1/2a F6854]
Length = 156
Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats.
Identities = 66/156 (42%), Positives = 106/156 (67%)
Query: 64 CRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQ 123
I +++A+PG++IGK G+++E +RK L+ +T +H+++ E+ + +++A L+A++IA+Q
Sbjct: 1 MNITIHTAKPGMVIGKGGSEVEALRKNLNELTQKRVHINIVEIKRADLDAKLVAENIARQ 60
Query: 124 LERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHID 183
LE RV FRRA K+A+Q MR GA G+K SGRL GA+++R E Y EG VPL TLRA ID
Sbjct: 61 LEGRVSFRRAQKQAIQRTMRAGAKGIKTQVSGRLGGADIARAEHYSEGTVPLHTLRADID 120
Query: 184 YGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
Y A+T YG G+KV++ + + + + +
Sbjct: 121 YAWEEADTTYGKLGVKVWIYRGEVLPTKKNNVEGGK 156
>gi|194477052|ref|YP_002049231.1| 30S ribosomal protein S3 [Paulinella chromatophora]
gi|171192059|gb|ACB43021.1| 30S ribosomal protein S3 [Paulinella chromatophora]
Length = 207
Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats.
Identities = 75/181 (41%), Positives = 113/181 (62%), Gaps = 5/181 (2%)
Query: 52 VAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT---NSEIHLSVNEVPK 108
++ I+I R + + +ARPG+++G++G+ IE++R + + N +I ++V E+ +
Sbjct: 17 LSDIIISRKADQLEVELRTARPGVLVGRQGSGIEELRNGIQKILDDLNRQIRINVVEIER 76
Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168
+ +A L+A+ IAQQLE+R+ FRRA++ A Q A R G G+K+ SGRLNGAE++RTE
Sbjct: 77 VDADAYLLAEYIAQQLEKRMAFRRAIRMATQRAQRAGVLGLKIQVSGRLNGAEIARTEWT 136
Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA--EHRVVEKD 226
EGRVPL TLRA IDY T VA T+YG GIKV+V + + P R +
Sbjct: 137 REGRVPLHTLRADIDYATKVASTSYGVLGIKVWVFKGEVIQHETRQPPTGVNPKRRPNRR 196
Query: 227 S 227
S
Sbjct: 197 S 197
>gi|323690441|gb|ADX99153.1| ribosomal protein S3 [Duranta serratifolia]
Length = 197
Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats.
Identities = 63/187 (33%), Positives = 112/187 (59%), Gaps = 11/187 (5%)
Query: 28 EYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLIIGK 79
Y L ED KIR++++ ++++ G+A+I I++ ++I++ P L+I
Sbjct: 1 NYSKGLQEDQKIRDFIKNYVQKNRRTSSGTEGIARIEIQKRIDLIQVIIFMGFPKLLIES 60
Query: 80 KGTDIEK---IRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKR 136
+ IE+ +K + N ++++++ + KP N ++A+ IA+QL+ RV FR+AMK+
Sbjct: 61 RPGGIEELKMNLQKEFHYVNRKLNIAITRIAKPYGNPKILAEFIARQLKNRVSFRKAMKK 120
Query: 137 AVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196
A++ + G G++V +GR+ G E++R E EGRVPLQT+RA IDY + T YG
Sbjct: 121 AIELTEQAGTKGIQVQIAGRIGGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYGVL 180
Query: 197 GIKVYVS 203
GIK+++
Sbjct: 181 GIKIWIF 187
>gi|323690405|gb|ADX99135.1| ribosomal protein S3 [Aloysia citrodora]
Length = 193
Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats.
Identities = 62/191 (32%), Positives = 112/191 (58%), Gaps = 11/191 (5%)
Query: 28 EYGALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLIIGK 79
Y L ED KIR+ +Q ++++ G+A+I I++ ++I++ P L+I
Sbjct: 1 NYSQGLQEDQKIRDLIQNYVQKNIRTSSGTEGIARIEIQKRIDLIQVIIFMGFPKLLIES 60
Query: 80 KGT---DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKR 136
+ +++ +K + N ++++++ + KP N ++A+ IA QL+ RV FR+AMK+
Sbjct: 61 RPRGVEELQMNLQKEFHYVNRKLNIAIIRIAKPYGNPNILAEFIAGQLKNRVSFRKAMKK 120
Query: 137 AVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196
A++ + G++V +GR++G E++R E EGRVPLQT+RA IDY + T YG
Sbjct: 121 AIELTEQADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYGVL 180
Query: 197 GIKVYVSLRDE 207
GIK+++ + E
Sbjct: 181 GIKIWIFIDKE 191
>gi|240018198|gb|ACS44480.1| Rps3 [Phragmites japonicus]
Length = 205
Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats.
Identities = 66/205 (32%), Positives = 107/205 (52%), Gaps = 17/205 (8%)
Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VA 53
FRLG +S WFA+ Y L ED KIR ++ ++++ +
Sbjct: 1 FRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIELDSSSEVIT 60
Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEIN 112
I I++ +I++ P L+ K ++EK +K N N +++++ +V +P
Sbjct: 61 HIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEVNSVNQRLNIAIEKVKEPYRQ 120
Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172
++A+ IA QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R E +GR
Sbjct: 121 PNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLAGKEIARAESIKKGR 180
Query: 173 VPLQTLRAHIDYGTAVAETAYGSCG 197
+PLQT+RA IDY T YG G
Sbjct: 181 LPLQTIRAKIDYCCYPIRTIYGVLG 205
>gi|240018170|gb|ACS44466.1| Rps3 [Eragrostis ferruginea]
Length = 205
Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats.
Identities = 67/205 (32%), Positives = 107/205 (52%), Gaps = 17/205 (8%)
Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VA 53
FRLG S WFA+ Y L ED KIR ++ ++++ +
Sbjct: 1 FRLGTTQNHYSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVIT 60
Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEIN 112
I I++ +I++ P L+ K ++EK +K N N +++++ +V +P
Sbjct: 61 HIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQ 120
Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172
++A+ IA QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR
Sbjct: 121 PNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGR 180
Query: 173 VPLQTLRAHIDYGTAVAETAYGSCG 197
+PLQT+RA IDY T YG G
Sbjct: 181 LPLQTIRAKIDYCCYPIRTIYGVLG 205
>gi|222139924|ref|YP_002519992.1| ribosomal protein S3 [Ephedra equisetina]
gi|220983593|dbj|BAH11360.1| ribosomal protein S3 [Ephedra equisetina]
Length = 215
Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats.
Identities = 66/215 (30%), Positives = 121/215 (56%), Gaps = 8/215 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA------GVAK 54
MG K+NP+ FRLG+ NS WFA+ EY L ED+KI + ++ ++ G+ +
Sbjct: 1 MGHKVNPMGFRLGLTQNHNSVWFAQKREYTRTLREDIKIHKCIEFFFQRHQRKSYLGIGR 60
Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEIN 112
I I+R II+Y P +K ++ K+ + + +++++ + KP
Sbjct: 61 IEIQRKIDLINIIIYIGFPIFFKNEKNEITRVKNDIKRTLYLRDQKLNINAEILAKPYQK 120
Query: 113 ATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR 172
++A+ IA QLE+RV ++ +++AV+ A + +G+++ +GRL G E +R GR
Sbjct: 121 TNILAEYIALQLEKRVAVKKILQKAVELAKKDEIEGIRIRIAGRLGGRERTRKTKIKLGR 180
Query: 173 VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
V LQTLRA +DY + T +G+ GI++++ ++++
Sbjct: 181 VTLQTLRAEMDYSSFTVRTIHGALGIQLWIFMKEQ 215
>gi|187763140|ref|YP_001876615.1| ribosomal protein S3 [Welwitschia mirabilis]
gi|163311670|gb|ABY26828.1| ribosomal protein S3 [Welwitschia mirabilis]
gi|220983421|dbj|BAH11190.1| ribosomal protein S3 [Welwitschia mirabilis]
Length = 214
Score = 164 bits (416), Expect = 7e-39, Method: Composition-based stats.
Identities = 63/214 (29%), Positives = 118/214 (55%), Gaps = 7/214 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA------GVAK 54
MG K+NP+ FRLG+ +S WF + Y + ED+KI + ++ + ++ G+A+
Sbjct: 1 MGHKVNPLGFRLGITQKNHSVWFVKKRLYPKIFQEDVKIHKSIENYFQRHQQNSYLGIAR 60
Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEV-PKPEINA 113
I IER +I+++ + +KG + N+ + E+ KP NA
Sbjct: 61 IEIERKVDLINVIIFTGFSSFLNKEKGKISSLKNEIRQNLGTKKKLNVKTEILKKPYQNA 120
Query: 114 TLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV 173
++ + IA QLE+RV ++ +++AV+ A + +G+++ +GRL G E +R GRV
Sbjct: 121 KILVEFIASQLEKRVAVKKILQKAVELAQKEDIEGIRIRIAGRLGGRERTRKTKKKIGRV 180
Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
LQTLRA ++Y + T +G+ GI++++ ++++
Sbjct: 181 TLQTLRAEMNYCSYTVRTIHGTLGIQLWIFMKEQ 214
>gi|240018176|gb|ACS44469.1| Rps3 [Festuca subulata var. japonica]
Length = 220
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 68/220 (30%), Positives = 110/220 (50%), Gaps = 32/220 (14%)
Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG------------------ 51
FRLG +S WFA+ Y L ED KIR+ ++ ++++
Sbjct: 1 FRLGTTQKHHSFWFAQPKNYSEGLQEDKKIRDCIKNYIQKNRKKSSNRKLESDSSSEVIT 60
Query: 52 -------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNS 97
+ +I I++ +I++ P L+ K ++EK +K + N
Sbjct: 61 HNRKTDSGSSSEVITRIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEIHSVNQ 120
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+++S+ +V +P ++A+ IA QL+ RV FR+AMK+A++ + GVKV +GRL
Sbjct: 121 RLNISIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGVKVKIAGRL 180
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197
G E++R EC +GR+PLQT+RA IDY T YG G
Sbjct: 181 GGKEIARAECIKKGRLPLQTIRAKIDYCYYPIRTIYGVLG 220
>gi|313616919|gb|EFR89566.1| ribosomal protein S3 [Listeria innocua FSL S4-378]
Length = 152
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 65/152 (42%), Positives = 105/152 (69%)
Query: 68 VYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERR 127
+++A+PG++IGK G+++E +RK L+ +T +H+++ E+ + +++A L+A++IA+QLE R
Sbjct: 1 IHTAKPGMVIGKGGSEVEALRKNLNELTQKRVHINIVEIKRADLDAKLVAENIARQLEGR 60
Query: 128 VVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTA 187
V FRRA K+A+Q MR GA G+K SGRL GA+++R E Y EG VPL TLRA IDY
Sbjct: 61 VSFRRAQKQAIQRTMRAGAKGIKTQVSGRLGGADIARAEHYSEGTVPLHTLRADIDYAWE 120
Query: 188 VAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
A+T YG G+KV++ + + + + +
Sbjct: 121 EADTTYGKLGVKVWIYRGEVLPTKKNNVEGGK 152
>gi|323690431|gb|ADX99148.1| ribosomal protein S3 [Casselia glaziovii]
Length = 199
Score = 162 bits (411), Expect = 3e-38, Method: Composition-based stats.
Identities = 64/197 (32%), Positives = 115/197 (58%), Gaps = 15/197 (7%)
Query: 26 GSEYGALLHEDLKIREYLQCHLKQ---------AGVAKILIERTHKNCRIIVYSARPGLI 76
Y L ED KIR++++ ++++ G+A+I I++ ++I++ P L+
Sbjct: 1 PKNYSEGLQEDQKIRDFIKNYVQKKNRRTPSRAGGIARIEIQKRIDLIQVIIFMGSPKLL 60
Query: 77 IGKKG------TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVF 130
I K +++ +K + N ++++++ + KP N+T++A+ IA QL RV F
Sbjct: 61 IESKQSRRRRIEELQMNLQKEFHYGNRKLNIAITRIAKPYGNSTILAEFIANQLNNRVSF 120
Query: 131 RRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAE 190
R+AMK+A++ A + G G++V +GR+ G E++R E EGRVPLQT+RA +DY +
Sbjct: 121 RKAMKKAIKLAEQAGTKGIQVQLAGRIGGKEIARVEWLREGRVPLQTIRAKMDYCSYPVR 180
Query: 191 TAYGSCGIKVYVSLRDE 207
T YG GIK+++ + E
Sbjct: 181 TIYGVLGIKIWIFIDKE 197
>gi|240018186|gb|ACS44474.1| Rps3 [Lolium perenne]
Length = 220
Score = 162 bits (411), Expect = 3e-38, Method: Composition-based stats.
Identities = 68/220 (30%), Positives = 110/220 (50%), Gaps = 32/220 (14%)
Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG------------------ 51
FRLG +S WFA+ Y L ED KIR+ ++ ++++
Sbjct: 1 FRLGTTQKHHSFWFAQPKNYSEGLQEDKKIRDCIKNYIQKNRKKSSNRKLESDSSSEVIT 60
Query: 52 -------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNS 97
+ +I I++ +I++ P L+ K ++EK +K + N
Sbjct: 61 HNRKNDSGSSSEVITRIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEIHSVNQ 120
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+++S+ +V +P ++A+ IA QL+ RV FR+AMK+A++ + GVKV +GRL
Sbjct: 121 RLNISIEKVKEPYREPNILAEYIAFQLKNRVSFRKAMKKAMELTKKADIKGVKVKIAGRL 180
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197
G E++R EC +GR+PLQT+RA IDY T YG G
Sbjct: 181 GGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLG 220
>gi|240018148|gb|ACS44455.1| Rps3 [Beckmannia syzigachne]
gi|240018174|gb|ACS44468.1| Rps3 [Festuca ovina var. ovina]
Length = 220
Score = 162 bits (411), Expect = 3e-38, Method: Composition-based stats.
Identities = 68/220 (30%), Positives = 110/220 (50%), Gaps = 32/220 (14%)
Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG------------------ 51
FRLG +S WFA+ Y L ED KIR+ ++ ++++
Sbjct: 1 FRLGTTQKHHSFWFAQPKNYSEGLQEDKKIRDCIKNYIQKNRKKSSNRKLESDSSSEVIT 60
Query: 52 -------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNS 97
+ +I I++ +I++ P L+ K ++EK +K + N
Sbjct: 61 HNRKTDSGSSSEVITRIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEIHSVNQ 120
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+++S+ +V +P ++A+ IA QL+ RV FR+AMK+A++ + GVKV +GRL
Sbjct: 121 RLNISIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGVKVKIAGRL 180
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197
G E++R EC +GR+PLQT+RA IDY T YG G
Sbjct: 181 GGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLG 220
>gi|240018140|gb|ACS44451.1| Rps3 [Alopecurus japonicus]
Length = 220
Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats.
Identities = 68/220 (30%), Positives = 110/220 (50%), Gaps = 32/220 (14%)
Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG------------------ 51
FRLG +S WFA+ Y L ED KIR+ ++ ++++
Sbjct: 1 FRLGTTQKHHSFWFAQPKNYSEGLQEDKKIRDCIKNYIQKNRKKSSNRKLESDSSSEVIT 60
Query: 52 -------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNS 97
+ +I I++ +I++ P L+ K ++EK +K + N
Sbjct: 61 HNRKTDSGSSSEVITRIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDIQKEIHSVNQ 120
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+++S+ +V +P ++A+ IA QL+ RV FR+AMK+A++ + GVKV +GRL
Sbjct: 121 RLNISIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGVKVKIAGRL 180
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197
G E++R EC +GR+PLQT+RA IDY T YG G
Sbjct: 181 GGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLG 220
>gi|240018184|gb|ACS44473.1| Rps3 [Lolium sp. YDK2008447]
Length = 220
Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats.
Identities = 68/220 (30%), Positives = 110/220 (50%), Gaps = 32/220 (14%)
Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG------------------ 51
FRLG +S WFA+ Y L ED KIR+ ++ ++++
Sbjct: 1 FRLGTTQKHHSFWFAQPKNYSEGLQEDKKIRDCIKNYIQKNRKKSSNRKLESDSSSEVIT 60
Query: 52 -------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNS 97
+ +I I++ +I++ P L+ K ++EK +K + N
Sbjct: 61 HNRKNDSGSSSEVITRIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEIHSVNQ 120
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+++S+ +V +P ++A+ IA QL+ RV FR+AMK+A++ + GVKV +GRL
Sbjct: 121 RLNISIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAMELTKKADIKGVKVKIAGRL 180
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197
G E++R EC +GR+PLQT+RA IDY T YG G
Sbjct: 181 GGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLG 220
>gi|240018202|gb|ACS44482.1| Rps3 [Sasa borealis]
gi|240018204|gb|ACS44483.1| Rps3 [Sasa palmata]
Length = 220
Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats.
Identities = 67/220 (30%), Positives = 109/220 (49%), Gaps = 32/220 (14%)
Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG------------------ 51
FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 FRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIESDSSSEVIT 60
Query: 52 -------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNS 97
+ +I I++ +I++ P L+ K ++EK +K N N
Sbjct: 61 HNRKMDSGSSSEVITRIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEVNSVNQ 120
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+++++ +V +P ++A+ IA QL+ RV FR+AMK+A++ + GVK+ +GRL
Sbjct: 121 RLNIAIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIRGVKIKIAGRL 180
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197
G E++R EC +GR+PLQT+RA IDY T YG G
Sbjct: 181 AGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLG 220
>gi|240018200|gb|ACS44481.1| Rps3 [Poa pratensis]
Length = 220
Score = 161 bits (408), Expect = 6e-38, Method: Composition-based stats.
Identities = 68/220 (30%), Positives = 110/220 (50%), Gaps = 32/220 (14%)
Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG------------------ 51
FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 FRLGTTQKHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKLESDSSSEVIT 60
Query: 52 -------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNS 97
+ +I I++ +I++ P L+ K ++EK +K + N
Sbjct: 61 HNRKSDSGSSSEVITRIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEIHSANQ 120
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+++S+ +V +P +++A+ IA QL+ RV FR+AMK+A++ + GVKV +GRL
Sbjct: 121 RLNISIEKVKEPYRQPSILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGVKVKIAGRL 180
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197
G E++R EC +GR+PLQT+RA IDY T YG G
Sbjct: 181 GGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLG 220
>gi|240018138|gb|ACS44450.1| Rps3 [Cinna latifolia]
Length = 220
Score = 161 bits (408), Expect = 6e-38, Method: Composition-based stats.
Identities = 68/220 (30%), Positives = 110/220 (50%), Gaps = 32/220 (14%)
Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG------------------ 51
FRLG +S WFA+ Y L ED KIR+ ++ ++++
Sbjct: 1 FRLGTTQKHHSFWFAQPKNYSEGLQEDKKIRDCIKNYIQKNRKKSSNRKLESDSSSEVIT 60
Query: 52 -------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNS 97
+ +I I++ +I++ P L+ K ++EK +K + N
Sbjct: 61 HNRKMDSGSSSEVITRIEIKKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEIHSVNQ 120
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+++S+ +V +P ++A+ IA QL+ RV FR+AMK+A++ + GVKV +GRL
Sbjct: 121 RLNISIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGVKVKIAGRL 180
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197
G E++R EC +GR+PLQT+RA IDY T YG G
Sbjct: 181 GGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLG 220
>gi|240018142|gb|ACS44452.1| Rps3 [Arrhenatherum elatius]
Length = 220
Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats.
Identities = 68/220 (30%), Positives = 109/220 (49%), Gaps = 32/220 (14%)
Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG------------------ 51
FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 FRLGTTQKHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIESDSSSEVIT 60
Query: 52 -------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNS 97
+ +I I++ +I++ P L+ K ++EK +K + N
Sbjct: 61 HNRKTDSGSSSEVITRIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEIHSVNQ 120
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+++S+ +V +P ++A+ IA QL+ RV FR+AMK+A++ + GVKV +GRL
Sbjct: 121 RLNISIEKVKEPYREPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIRGVKVKIAGRL 180
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197
G E++R EC +GR+PLQT+RA IDY T YG G
Sbjct: 181 GGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLG 220
>gi|240018224|gb|ACS44493.1| Rps3 [Trisetum bifidum]
gi|240018226|gb|ACS44494.1| Rps3 [Trisetum sibiricum]
Length = 220
Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats.
Identities = 68/220 (30%), Positives = 109/220 (49%), Gaps = 32/220 (14%)
Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG------------------ 51
FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 FRLGTTQKHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIESDSSSEVIT 60
Query: 52 -------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNS 97
+ +I I++ +I++ P L+ K ++EK +K + N
Sbjct: 61 HNRKTDSGSSSEVITRIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKQIHSVNQ 120
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+++S+ +V +P ++A+ IA QL+ RV FR+AMK+A++ + GVKV +GRL
Sbjct: 121 RLNISIEKVKEPYREPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIRGVKVKIAGRL 180
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197
G E++R EC +GR+PLQT+RA IDY T YG G
Sbjct: 181 GGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLG 220
>gi|225621034|ref|YP_002722292.1| 30S ribosomal protein S3 [Brachyspira hyodysenteriae WA1]
gi|225215854|gb|ACN84588.1| 30S ribosomal protein S3 [Brachyspira hyodysenteriae WA1]
Length = 202
Score = 160 bits (406), Expect = 9e-38, Method: Composition-based stats.
Identities = 74/183 (40%), Positives = 107/183 (58%)
Query: 44 QCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSV 103
+ ++ I I R I + +AR G++IG KG +E ++ + M +H S+
Sbjct: 18 KKESFDPAISDIQIVRFPDRINIFISTARAGVVIGPKGQRVETVKTTVQKMVKKPVHFSI 77
Query: 104 NEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELS 163
E+ E++A L AQS+A+QLE RV FRRAMK + AM+ GA G+KV+ SGRL GA+++
Sbjct: 78 TEIRDAELDANLAAQSVARQLEMRVAFRRAMKSVITQAMKKGAKGIKVMCSGRLAGADIA 137
Query: 164 RTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVV 223
RTE Y G VPL TLRA+IDYGTA A T +G GIKV++ + + + A +
Sbjct: 138 RTEQYKNGSVPLHTLRANIDYGTAEALTTFGIIGIKVWIYKGEILDKKEHKQDDAGKVIS 197
Query: 224 EKD 226
K
Sbjct: 198 AKG 200
>gi|240018136|gb|ACS44449.1| Rps3 [Agrostis clavata var. nukabo]
Length = 220
Score = 160 bits (406), Expect = 9e-38, Method: Composition-based stats.
Identities = 69/220 (31%), Positives = 110/220 (50%), Gaps = 32/220 (14%)
Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG------------------ 51
FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 FRLGTTQKHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIESDSSSEVIT 60
Query: 52 -------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNS 97
+ +I I++ +I++ P L+ K ++EK +K + N
Sbjct: 61 HNRKTDSGSSSEVITRIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEIHSVNQ 120
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+++S+ +V +P T++A+ IA QL+ RV FR+AMK+A++ + GVKV +GRL
Sbjct: 121 RLNISIEKVKEPYREPTILAEYIAFQLKNRVSFRKAMKKAIELTKKADIRGVKVKIAGRL 180
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197
G E++R EC +GR+PLQT+RA IDY T YG G
Sbjct: 181 GGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLG 220
>gi|240018154|gb|ACS44458.1| Rps3 [Neomolinia fauriei]
gi|240018156|gb|ACS44459.1| Rps3 [Neomolinia japonica]
Length = 220
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 69/220 (31%), Positives = 108/220 (49%), Gaps = 32/220 (14%)
Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG------------------ 51
FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 FRLGTTQKHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIESDSSSEVIT 60
Query: 52 -------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNS 97
+ I I++ +I++ P L+ K ++EK +K N N
Sbjct: 61 HNRKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEINSVNQ 120
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+++S+ +V +P ++A+ IA QL+ RV FR+AMK+A++ + GVKV +GRL
Sbjct: 121 RLNISIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIRGVKVKIAGRL 180
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197
G E++R EC +GR+PLQT+RA IDY T YG G
Sbjct: 181 GGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLG 220
>gi|323690425|gb|ADX99145.1| ribosomal protein S3 [Pitraea cuneato-ovata]
Length = 191
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 61/191 (31%), Positives = 114/191 (59%), Gaps = 9/191 (4%)
Query: 26 GSEYGALLHEDLKIREYLQCHLKQA------GVAKILIERTHKNCRIIVYSARPGLIIGK 79
Y L ED KIR++++ +L++ G+ +I I++T + R+I+++ P L+I
Sbjct: 1 PKCYSEGLQEDQKIRDFIKNYLQKNISSGTEGITRIEIQKTIDSIRVIIFTGFPKLLIKN 60
Query: 80 KGTDIEKIRKKLSN---MTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKR 136
+ I++++ L N ++++++ + KP N T++A+ IA QL+ RV FR+AM++
Sbjct: 61 RPEVIKELQMNLEKEFHYVNRKLNIAITRIVKPYGNPTILAEFIAVQLKSRVPFRKAMQK 120
Query: 137 AVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196
A++ A + G++V +GRL+G E++ EGRVP QT++A +DY + T +G
Sbjct: 121 AIELAEQADTKGIQVQIAGRLDGKEIAGVAWMREGRVPRQTIQAKMDYCSYPVRTIFGVL 180
Query: 197 GIKVYVSLRDE 207
GIK++V +E
Sbjct: 181 GIKIWVFKEEE 191
>gi|240018190|gb|ACS44476.1| Rps3 [Phaenosperma globosa]
Length = 220
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 68/220 (30%), Positives = 108/220 (49%), Gaps = 32/220 (14%)
Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG------------------ 51
FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 FRLGTTQKHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIESDSSSEVIT 60
Query: 52 -------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNS 97
+ I I++ +I++ P L+ K ++EK +K N N
Sbjct: 61 HNRKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEVNSVNQ 120
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+++++ +V +P ++A+ IA QL+ RV FR+AMK+A++ + GVKV +GRL
Sbjct: 121 RLNIAIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIRGVKVKIAGRL 180
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197
G E++R EC +GR+PLQT+RA IDY T YG G
Sbjct: 181 GGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLG 220
>gi|115443549|ref|YP_778568.1| 30S ribosomal protein S3 [Bigelowiella natans]
gi|122233793|sp|Q06J59|RR3_BIGNA RecName: Full=30S ribosomal protein S3, chloroplastic
gi|110810194|gb|ABG91400.1| 30S ribosomal protein S3 [Bigelowiella natans]
Length = 246
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 76/244 (31%), Positives = 114/244 (46%), Gaps = 39/244 (15%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL-------------QCHL 47
MGQK++P+ FR+G+N + S+WF + +Y LL +D IR+ + + L
Sbjct: 1 MGQKVHPLGFRVGLNGNYKSKWFVKPKDYSLLLFQDYLIRKNIFNYFNILNNSKNKKNLL 60
Query: 48 KQAGVAKILIERTHKNCRIIVYSARPGLIIGKKG-------------------TDIEKIR 88
+ I I R I +Y A +I + +
Sbjct: 61 DSINITDIKINRKFDQVYIDIYVASMNKVIFNTSGSNSDPLIKIQSNKIVDQLQRVLLKQ 120
Query: 89 KKLSNMTNSEIHLSVNEVPK----PEINAT--LIAQSIAQQLERRVVFRRAMKRAVQSAM 142
N+ N +++ S + P+IN IA+ + LE RV FRRA+K + +
Sbjct: 121 VSSFNLGNKKVNNSSKIIVNIIESPDINTNAVFIAKCLIDDLENRVPFRRALKTILDTTQ 180
Query: 143 RF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVY 201
+ GVK+ SGRLNG E++R+E EGR+PLQTL A+I Y VAET YG G+KV+
Sbjct: 181 KQKNLAGVKIQISGRLNGIEMARSEWVREGRIPLQTLTANIGYYNDVAETKYGLLGVKVW 240
Query: 202 VSLR 205
V
Sbjct: 241 VYKN 244
>gi|240018196|gb|ACS44479.1| Rps3 [Phalaris arundinacea]
Length = 220
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 68/220 (30%), Positives = 109/220 (49%), Gaps = 32/220 (14%)
Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG------------------ 51
FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 FRLGTTQKHHSFWFAQPKNYSKGLQEDKKIRNCIKNYIQKNRKKGSNRKIESDSSSEVIT 60
Query: 52 -------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNS 97
+ +I I++ +I++ P L+ K ++EK +K + N
Sbjct: 61 HNRKTDSGSSSEVITRIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEIHSVNQ 120
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+++S+ +V +P ++A+ IA QL+ RV FR+AMK+A++ + GVKV +GRL
Sbjct: 121 RLNISIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIRGVKVKIAGRL 180
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197
G E++R EC +GR+PLQT+RA IDY T YG G
Sbjct: 181 GGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLG 220
>gi|330720676|gb|EGG98919.1| SSU ribosomal protein S3p (S3e) [gamma proteobacterium IMCC2047]
Length = 137
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 63/130 (48%), Positives = 89/130 (68%)
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ +++ E+ KP+++A LIA S+A QLERRV+FRRAMKRAVQ+AMR GA+G+K+ GRL
Sbjct: 2 PVQINIEEIRKPDLDAKLIADSVAGQLERRVMFRRAMKRAVQNAMRQGAEGIKIQVGGRL 61
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
GAE++R+E Y EGRVPL TLRA IDY T+ A T YG G+KV+V + + +
Sbjct: 62 GGAEIARSEWYREGRVPLHTLRADIDYATSEASTTYGIIGVKVWVFKGEVLGGIEQVRAE 121
Query: 218 AEHRVVEKDS 227
+ + +
Sbjct: 122 RKADKANQGN 131
>gi|240018220|gb|ACS44491.1| Rps3 [Stipa sibirica]
Length = 220
Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats.
Identities = 67/220 (30%), Positives = 108/220 (49%), Gaps = 32/220 (14%)
Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG------------------ 51
FRLG +S WFA+ Y + ED KIR ++ ++++
Sbjct: 1 FRLGTTQKHHSFWFAQPKNYSEGIQEDKKIRNCIKNYIQKNSKKGSNRKIESDSSSEVIT 60
Query: 52 -------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNS 97
+ I I++ +I++ P L+ K ++EK +K N N
Sbjct: 61 HNRKTDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEVNSVNQ 120
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+++++ +V +P ++A+ IA QL+ RV FR+AMK+A++ + GVKV +GRL
Sbjct: 121 RLNIAIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIRGVKVKIAGRL 180
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197
G E++R EC +GR+PLQT+RA IDY T YG G
Sbjct: 181 GGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIYGVLG 220
>gi|240018134|gb|ACS44448.1| Rps3 [Elymus tsukushiensis var. transiens]
Length = 220
Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats.
Identities = 68/220 (30%), Positives = 107/220 (48%), Gaps = 32/220 (14%)
Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG------------------ 51
FRLG +S WFA+ Y L ED KIR+ ++ ++++
Sbjct: 1 FRLGTTQKHHSFWFAQPKNYSEGLQEDKKIRDCIKNYIQKNRKKGSNRKIESDSSSEVIT 60
Query: 52 -------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNS 97
+ I I++ +I++ P L+ K ++EK +K N N
Sbjct: 61 HNKKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEINSVNQ 120
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
++S+ +V +P ++A+ IA QL+ RV FR+AMK+A++ + GVKV +GRL
Sbjct: 121 RFNISIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIRGVKVKIAGRL 180
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197
G E++R E +GR+PLQT+RA IDY T YG G
Sbjct: 181 GGKEIARAESIKKGRLPLQTIRAKIDYCCYPIRTIYGVLG 220
>gi|240018150|gb|ACS44456.1| Rps3 [Bromus remotiflorus]
Length = 220
Score = 159 bits (401), Expect = 4e-37, Method: Composition-based stats.
Identities = 68/220 (30%), Positives = 108/220 (49%), Gaps = 32/220 (14%)
Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG------------------ 51
FRLG +S WFA+ Y L ED KIR+ ++ ++++
Sbjct: 1 FRLGTTQKHHSFWFAQPKNYSEGLQEDKKIRDCIKNYIQKNRKKGSNRKIESDSSSEVIT 60
Query: 52 -------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNS 97
+ I I++ +I++ P L+ K ++EK +K N N
Sbjct: 61 HNRKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEINSVNQ 120
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+++S+ +V +P ++A+ IA QL+ RV FR+AMK+A++ + GVKV +GRL
Sbjct: 121 RLNISIEKVKEPYRQPHILAEYIAFQLKNRVSFRKAMKKAIELTKKADIRGVKVKIAGRL 180
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197
G E++R E +GR+PLQT+RA IDY T YG G
Sbjct: 181 GGKEIARAESIKKGRLPLQTIRAKIDYCCYPIRTIYGVLG 220
>gi|213023088|ref|ZP_03337535.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 138
Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats.
Identities = 69/138 (50%), Positives = 99/138 (71%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ WNS WFA E+ L D K+R+YL L +A V++I+IER
Sbjct: 1 MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+RK ++++ +++ EV KPE++A L+A SI
Sbjct: 61 AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI 120
Query: 121 AQQLERRVVFRRAMKRAV 138
QLERRV+FRRAMKRAV
Sbjct: 121 TSQLERRVMFRRAMKRAV 138
>gi|294669830|ref|ZP_06734889.1| hypothetical protein NEIELOOT_01723 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291308223|gb|EFE49466.1| hypothetical protein NEIELOOT_01723 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 157
Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats.
Identities = 72/152 (47%), Positives = 106/152 (69%), Gaps = 3/152 (1%)
Query: 75 LIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM 134
++IG+KG DI+ +++ L N+ +H+++ E+ KPE++A +IA IAQQLE+RV FRRAM
Sbjct: 1 MVIGRKGEDIDVLKRDLQNLMGVPVHVNIEEIRKPELDAQIIADGIAQQLEKRVQFRRAM 60
Query: 135 KRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
KRA+Q+AMR GA G+K++ SGRLNGA+++R+E Y EGRVPL TLRA++ Y T+ A T YG
Sbjct: 61 KRAMQNAMRVGAKGIKIMTSGRLNGADIARSEWYREGRVPLHTLRANVSYATSEANTTYG 120
Query: 195 SCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
G+KV+V + D + E +
Sbjct: 121 VIGLKVWVYTGE---GKDVVLNKPEQEHKRRK 149
>gi|149912423|ref|ZP_01900961.1| 30S ribosomal subunit protein S3 [Moritella sp. PE36]
gi|149804494|gb|EDM64588.1| 30S ribosomal subunit protein S3 [Moritella sp. PE36]
Length = 137
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 64/129 (49%), Positives = 84/129 (65%), Gaps = 4/129 (3%)
Query: 100 HLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNG 159
+++ E+ KPE++A L+A+ IA ERRV+FRRAMKRAVQ+AMR GA G+KV SGRL G
Sbjct: 3 QINIAEIRKPELDAKLVAEGIASPPERRVMFRRAMKRAVQNAMRLGAKGIKVQVSGRLGG 62
Query: 160 AELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV----SDSDSTI 215
AE++R E Y EGRVPL T RA IDY TA A T YG G+KV++ + + +
Sbjct: 63 AEIARAEWYREGRVPLHTFRADIDYSTAEALTTYGIIGVKVWIFKGEVLGKLPLTQEVEA 122
Query: 216 PAAEHRVVE 224
P+ R
Sbjct: 123 PSKPKRRSR 131
>gi|323690429|gb|ADX99147.1| ribosomal protein S3 [Rehdera trinervis]
Length = 189
Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 61/185 (32%), Positives = 114/185 (61%), Gaps = 11/185 (5%)
Query: 30 GALLHEDLKIREYLQCHLKQA--------GVAKILIERTHKNCRIIVYSARPGLIIGKKG 81
L ED KIR++++ ++++ G+A+I I++ +II++ P +I +
Sbjct: 3 SEGLQEDQKIRDFIKNYVQKNTRTSSGAEGIARIKIQKRIDLIQIIIFMGFPKFLIESRP 62
Query: 82 TDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAV 138
IE+++ +K + N ++++++ ++ KP +A ++A+ IA+QL RV FR+AMK+A+
Sbjct: 63 RGIEELQMNLQKEFHYVNRKLNIAITKIAKPYGSANILAEFIAEQLNNRVPFRKAMKKAI 122
Query: 139 QSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ A + G++V +GR+NG E++R E +GRVPLQT+RA +DY + T YG GI
Sbjct: 123 ELAKQADTKGIQVQMAGRINGKEIARVEWIRDGRVPLQTIRAKMDYCSYTIWTIYGVLGI 182
Query: 199 KVYVS 203
K+++
Sbjct: 183 KIWIF 187
>gi|33322055|gb|AAQ06746.1|AF496090_1 30s ribosomal protein S3 [Lactobacillus delbrueckii subsp. lactis]
Length = 147
Score = 151 bits (381), Expect = 8e-35, Method: Composition-based stats.
Identities = 67/148 (45%), Positives = 103/148 (69%), Gaps = 1/148 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG KINPI FRLGVN W ++W+A Y L+EDL+IR++L LK A V+ + IER
Sbjct: 1 MGSKINPIGFRLGVNRDWEAKWYA-ARGYKETLNEDLRIRKFLDEKLKDASVSTVEIERA 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++ARPG++IGK G ++ + K+++ +TN ++H+++ E+ KP+++A L+A I
Sbjct: 60 ANRVNIAIHTARPGMVIGKGGAEVXTLNKEINALTNKQVHINIVEIKKPDLDAKLVADGI 119
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADG 148
A+QLE R+ FRRA ++A Q +MR GA G
Sbjct: 120 ARQLEARIAFRRASRQAAQRSMRAGAKG 147
>gi|153820558|ref|ZP_01973225.1| ribosomal protein S3 [Vibrio cholerae NCTC 8457]
gi|126508898|gb|EAZ71492.1| ribosomal protein S3 [Vibrio cholerae NCTC 8457]
Length = 119
Score = 151 bits (381), Expect = 8e-35, Method: Composition-based stats.
Identities = 63/110 (57%), Positives = 79/110 (71%)
Query: 115 LIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVP 174
L+A SIA QLERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R+E Y EGRVP
Sbjct: 1 LVADSIASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVP 60
Query: 175 LQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
L TLRA IDY T+ A T YG G+KV++ + + + AAE + +
Sbjct: 61 LHTLRADIDYATSSAHTTYGVIGVKVWIFKGEILGGMPAATEAAEPKADK 110
>gi|309808527|ref|ZP_07702426.1| ribosomal protein S3 [Lactobacillus iners LactinV 01V1-a]
gi|308168355|gb|EFO70474.1| ribosomal protein S3 [Lactobacillus iners LactinV 01V1-a]
Length = 151
Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 63/148 (42%), Positives = 98/148 (66%), Gaps = 1/148 (0%)
Query: 75 LIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM 134
++IGK G ++E++R +L+ +T +H+++ E+ KP++ A L+ +SIA+QLE R+ FRRA
Sbjct: 1 MVIGKGGKEVEELRTRLNTITGKNVHINIVEIKKPDLEAKLVGESIAKQLEARIAFRRAT 60
Query: 135 KRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
++A Q +M GA G+KV +GRLNGA+++R E + EG VPL TLRA IDY A T YG
Sbjct: 61 RKATQRSMHVGAKGIKVQTAGRLNGADMARREWHTEGSVPLHTLRADIDYAWVEAATTYG 120
Query: 195 SCGIKVYVSLRDEVSDSDSTIPAAEHRV 222
G+KV+++ E+ P A +
Sbjct: 121 QIGVKVWINRG-EILPQRKNKPVASKKA 147
>gi|297837921|ref|XP_002886842.1| hypothetical protein ARALYDRAFT_475549 [Arabidopsis lyrata subsp.
lyrata]
gi|297332683|gb|EFH63101.1| hypothetical protein ARALYDRAFT_475549 [Arabidopsis lyrata subsp.
lyrata]
Length = 160
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 54/156 (34%), Positives = 94/156 (60%), Gaps = 3/156 (1%)
Query: 51 GVAKILIERTHKNCRIIVYSARPGLIIGKKGT---DIEKIRKKLSNMTNSEIHLSVNEVP 107
G+A+I I++ +II+Y P L+I K +++ +K N N ++++++ +
Sbjct: 3 GIARIEIQKRIDLIQIIIYMGFPKLLIEDKPRRVEELQMNVQKELNCVNRKLNIAITRIS 62
Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTEC 167
P + ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E
Sbjct: 63 NPYGDPNILAEFIAGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRIDGKEIARVEW 122
Query: 168 YLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
EGRVPLQT+ A IDY + T YG GIK+++
Sbjct: 123 IREGRVPLQTIEAKIDYCSYTVRTIYGVLGIKIWIF 158
>gi|213496090|gb|ACJ49193.1| ribosomal protein S3 [uncultured Geobacter sp.]
Length = 126
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 65/127 (51%), Positives = 100/127 (78%), Gaps = 1/127 (0%)
Query: 2 GQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTH 61
GQK+NP+ FRLGV TW+S+W+A +Y LLHEDLK+R +L+ L +GV+KI IER
Sbjct: 1 GQKVNPVGFRLGVIKTWDSKWYAE-KDYAKLLHEDLKLRNFLKKRLYHSGVSKIEIERAA 59
Query: 62 KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIA 121
+I +++ARPGLIIGKKG+++E ++K+L+ +T+ E++L++ EV KPE++A L+A+++A
Sbjct: 60 GKAKINIFTARPGLIIGKKGSEVETLKKELAKLTDKEVYLNIQEVRKPELDAQLVAENVA 119
Query: 122 QQLERRV 128
QLERR+
Sbjct: 120 MQLERRI 126
>gi|297846050|ref|XP_002890906.1| hypothetical protein ARALYDRAFT_473322 [Arabidopsis lyrata subsp.
lyrata]
gi|297336748|gb|EFH67165.1| hypothetical protein ARALYDRAFT_473322 [Arabidopsis lyrata subsp.
lyrata]
Length = 160
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 55/156 (35%), Positives = 96/156 (61%), Gaps = 3/156 (1%)
Query: 51 GVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVP 107
G+A+I I++ +II+Y P L+I K +E+++ +K N N ++++++ +
Sbjct: 3 GIARIEIQKRINLIQIIIYMGFPKLLIEDKPRRVEELQINVQKELNCVNRKLNIAITRIS 62
Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTEC 167
P + ++A+ IA QL+ RV FR+AMK+A++ + G++V +GR++G E++R E
Sbjct: 63 NPYGDPNILAEFIAGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIAGRIDGKEIARVEW 122
Query: 168 YLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
EGRVPLQT+ A IDY + T YG GIK+++
Sbjct: 123 IREGRVPLQTIEAKIDYCSYTVRTIYGVLGIKIWIF 158
>gi|254373698|ref|ZP_04989181.1| hypothetical protein FTDG_01480 [Francisella novicida GA99-3548]
gi|151571419|gb|EDN37073.1| hypothetical protein FTDG_01480 [Francisella novicida GA99-3548]
Length = 116
Score = 148 bits (373), Expect = 7e-34, Method: Composition-based stats.
Identities = 61/120 (50%), Positives = 87/120 (72%), Gaps = 5/120 (4%)
Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTEC 167
KPEI+A L+A+S+AQQLE+RV+FRRAMK+A+Q+AM+ GA G+K++ SGRL GAE++R+E
Sbjct: 1 KPEIDAKLVAESVAQQLEKRVMFRRAMKKAMQAAMKSGAKGIKIMVSGRLGGAEIARSEW 60
Query: 168 YLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
+GRVPLQT RA +DY TA A T YG G+KV++ + + AE + +K +
Sbjct: 61 ARDGRVPLQTFRADVDYATAEALTTYGVIGVKVWIYKGEILPGQ-----IAEKKNNKKGA 115
>gi|332139867|ref|YP_004425605.1| 30S ribosomal protein S3 [Alteromonas macleodii str. 'Deep
ecotype']
gi|327549889|gb|AEA96607.1| 30S ribosomal protein S3 [Alteromonas macleodii str. 'Deep
ecotype']
Length = 143
Score = 144 bits (364), Expect = 7e-33, Method: Composition-based stats.
Identities = 59/126 (46%), Positives = 80/126 (63%), Gaps = 4/126 (3%)
Query: 106 VPKPEINATLI-AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSR 164
+ KP + A +LERRV+FRRAMKRAVQ+AMR GA G+KV SGRL GAE++R
Sbjct: 14 ISKPWTSTWYANTADYADKLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIAR 73
Query: 165 TECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSD---SDSTIPAAEHR 221
+E Y EGRVPL T RA IDY T+ A T YG G+KV++ + + + PAA+ +
Sbjct: 74 SEWYREGRVPLHTFRADIDYATSEASTTYGIIGVKVWIFKGEVLGGLPTTQEQAPAAQPK 133
Query: 222 VVEKDS 227
+++
Sbjct: 134 KKGRNA 139
Score = 72.7 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 28/51 (54%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG 51
MGQK++P RLG++ W S W+A ++Y L + R ++ ++ A
Sbjct: 1 MGQKVHPTGIRLGISKPWTSTWYANTADYADKLERRVMFRRAMKRAVQNAM 51
>gi|295154084|gb|ADF82951.1| ribosomal protein S3 [Chasmanthium laxum]
Length = 193
Score = 144 bits (364), Expect = 8e-33, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDQKIRNCIKNYIQKNRKKGSNRKMESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDLQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIQIAGRLAGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|140068413|gb|ABE87621.2| Bacterial ribosomal protein S3 [Medicago truncatula]
Length = 158
Score = 144 bits (363), Expect = 9e-33, Method: Composition-based stats.
Identities = 53/173 (30%), Positives = 89/173 (51%), Gaps = 16/173 (9%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRLG +S WFA+ Y L ED IR+ ++ I++T
Sbjct: 1 MGQKIHPFGFRLGTTPNHDSIWFAQPKNYSENLKEDKIIRDCIKN----------YIQKT 50
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + I K+ I+ +K N +I++++ +P + ++A+ I
Sbjct: 51 SGVEGIG------RIKIKKRINLIQTNVQKNLNCVTRKINITITRIPNTYSDPNILAEFI 104
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV 173
A QL+ R+ FR+A+K+A++ A + GV+V +GR++G E++ E EG V
Sbjct: 105 AGQLKNRISFRKAIKKAIELAEQTCTKGVQVQIAGRIDGKEIACVEWIREGDV 157
>gi|295154454|gb|ADF83136.1| ribosomal protein S3 [Monanthochloe littoralis]
Length = 193
Score = 144 bits (363), Expect = 9e-33, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNKKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154208|gb|ADF83013.1| ribosomal protein S3 [Bouteloua parryi]
Length = 193
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDRKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYGEPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154200|gb|ADF83009.1| ribosomal protein S3 [Bouteloua dimorpha]
Length = 193
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYVQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYREPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154196|gb|ADF83007.1| ribosomal protein S3 [Bouteloua curtipendula]
gi|295154250|gb|ADF83034.1| ribosomal protein S3 [Bouteloua uniflora]
gi|295154336|gb|ADF83077.1| ribosomal protein S3 [Bouteloua reflexa]
Length = 193
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSLNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYREPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154306|gb|ADF83062.1| ribosomal protein S3 [Sporobolus indicus]
Length = 193
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 62/193 (32%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEDLQEDKKIRNCIKNYIQKNRKKSSNRKIESDASSEVITHIEIQKQI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK KK N N +++++ +V +P ++A+ I
Sbjct: 61 DTINVIIHIGFPNLLKKKGAIEELEKDIKKEVNCVNKRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154178|gb|ADF82998.1| ribosomal protein S3 [Chasmanthium latifolium]
Length = 193
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDQKIRNCIKNYIQKNRKKGSNRKIESDPSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDLQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLAGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154246|gb|ADF83032.1| ribosomal protein S3 [Bouteloua repens]
Length = 193
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 104/193 (53%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + +I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITRIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N ++++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQKLNIAIEKVKEPYREPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154372|gb|ADF83095.1| ribosomal protein S3 [Trichoneura weberbaueri]
gi|295154464|gb|ADF83141.1| ribosomal protein S3 [Trichoneura eleusinoides]
Length = 193
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKLESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154304|gb|ADF83061.1| ribosomal protein S3 [Trichloris pluriflora]
gi|295154368|gb|ADF83093.1| ribosomal protein S3 [Trichloris pluriflora]
gi|295154370|gb|ADF83094.1| ribosomal protein S3 [Trichloris crinita]
Length = 193
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 60/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+ ++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVTIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154194|gb|ADF83006.1| ribosomal protein S3 [Bouteloua barbata]
Length = 193
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDRKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYREPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154128|gb|ADF82973.1| ribosomal protein S3 [Eragrostis lanicaulis]
gi|295154198|gb|ADF83008.1| ribosomal protein S3 [Bouteloua dactyloides]
gi|295154202|gb|ADF83010.1| ribosomal protein S3 [Bouteloua diversispicula]
gi|295154204|gb|ADF83011.1| ribosomal protein S3 [Bouteloua gracilis]
gi|295154248|gb|ADF83033.1| ribosomal protein S3 [Bouteloua simplex]
Length = 193
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYREPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154206|gb|ADF83012.1| ribosomal protein S3 [Bouteloua hirsuta]
Length = 193
Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIQELEKDIQKEVNSVNQRLNIAIEKVKEPYREPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154328|gb|ADF83073.1| ribosomal protein S3 [Rytidosperma pictum]
gi|295154422|gb|ADF83120.1| ribosomal protein S3 [Austrodanthonia penicillata]
Length = 193
Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIESDPSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDLQKEINSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154064|gb|ADF82941.1| ribosomal protein S3 [Danthonia compressa]
Length = 193
Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 60/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ H+++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNHIQKNRKKGSNRKIESDPSSEVITHIEIQKEM 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVLIHIGFPNLLKKKGAIEELEKDLQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + G+K+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGIKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154310|gb|ADF83064.1| ribosomal protein S3 [Sporobolus atrovirens]
Length = 193
Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 62/193 (32%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEDLQEDKKIRNCIKNYIQKNSKKSSNRKIESDASSEVITHIEIQKQI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK KK N N +++++ +V +P ++A+ I
Sbjct: 61 NTINVIIHIGFPNLLKKKGAIEELEKDIKKEVNCVNKRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154358|gb|ADF83088.1| ribosomal protein S3 [Tripogon yunnanensis]
gi|295154360|gb|ADF83089.1| ribosomal protein S3 [Tripogon spicatus]
Length = 193
Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++ + + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYILKNRKKSLNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154038|gb|ADF82928.1| ribosomal protein S3 [Entoplocamia aristulata]
Length = 193
Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDPSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGTIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154408|gb|ADF83113.1| ribosomal protein S3 [Muhlenbergia richardsonis]
Length = 193
Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++ + +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIVIEKVKEPYREPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154270|gb|ADF83044.1| ribosomal protein S3 [Aegopogon cenchroides]
Length = 193
Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIESDPSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154152|gb|ADF82985.1| ribosomal protein S3 [Bewsia biflora]
Length = 193
Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKTESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154078|gb|ADF82948.1| ribosomal protein S3 [Chloris submutica]
gi|295154080|gb|ADF82949.1| ribosomal protein S3 [Chloris radiata]
Length = 193
Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKMESDPSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154418|gb|ADF83118.1| ribosomal protein S3 [Mosdenia leptostachys]
Length = 193
Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR + ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIMNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEX 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154288|gb|ADF83053.1| ribosomal protein S3 [Tetrapogon spathaceus]
Length = 193
Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 60/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDPSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++ K +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELGKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|320090471|gb|ADW08507.1| ribosomal protein S3 [Muhlenbergia filiformis]
Length = 193
Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSNSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYREPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154314|gb|ADF83066.1| ribosomal protein S3 [Sohnsia filifolia]
gi|295154316|gb|ADF83067.1| ribosomal protein S3 [Sohnsia filifolia]
Length = 193
Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLRKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154252|gb|ADF83035.1| ribosomal protein S3 [Brachyachne patentiflora]
Length = 193
Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYGQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154032|gb|ADF82925.1| ribosomal protein S3 [Eragrostis parviflora]
gi|295154126|gb|ADF82972.1| ribosomal protein S3 [Eragrostis kennedyae]
gi|295154134|gb|ADF82976.1| ribosomal protein S3 [Eragrostis barrelieri]
gi|295154240|gb|ADF83029.1| ribosomal protein S3 [Aegopogon tenellus]
gi|295154260|gb|ADF83039.1| ribosomal protein S3 [Cottea pappophoroides]
gi|295154286|gb|ADF83052.1| ribosomal protein S3 [Tetrapogon villosus]
gi|295154326|gb|ADF83072.1| ribosomal protein S3 [Saugetia fasciculata]
gi|320090413|gb|ADW08478.1| ribosomal protein S3 [Muhlenbergia alamosae]
gi|320090587|gb|ADW08565.1| ribosomal protein S3 [Muhlenbergia tarahumara]
Length = 193
Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDPSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154044|gb|ADF82931.1| ribosomal protein S3 [Enneapogon desvauxii]
Length = 193
Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 60/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIDSDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P + K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNFLKKKGAIEELEKDIQKEVNSVNRRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154468|gb|ADF83143.1| ribosomal protein S3 [Perotis indica]
Length = 193
Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKQI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSINQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154066|gb|ADF82942.1| ribosomal protein S3 [Dactyloctenium giganteum]
gi|295154068|gb|ADF82943.1| ribosomal protein S3 [Dactyloctenium bogdanii]
gi|295154070|gb|ADF82944.1| ribosomal protein S3 [Dactyloctenium australe]
gi|295154218|gb|ADF83018.1| ribosomal protein S3 [Brachychloa schiemanniana]
gi|295154228|gb|ADF83023.1| ribosomal protein S3 [Dactyloctenium aegyptium]
gi|295154508|gb|ADF83163.1| ribosomal protein S3 [Neobouteloua lophostachya]
Length = 193
Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSLNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154192|gb|ADF83005.1| ribosomal protein S3 [Bouteloua aristidoides]
Length = 193
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N ++++ + +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQKLNIGIEKVKEPYREPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|320090589|gb|ADW08566.1| ribosomal protein S3 [Muhlenbergia tenella]
Length = 193
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGTIEELEKDIQKEVNSLNHRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154296|gb|ADF83057.1| ribosomal protein S3 [Sporobolus teretifolius]
gi|295154302|gb|ADF83060.1| ribosomal protein S3 [Sporobolus pinetorum]
Length = 193
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKMESDASSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154342|gb|ADF83080.1| ribosomal protein S3 [Uniola paniculata]
Length = 193
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 63/193 (32%), Positives = 104/193 (53%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
R+I++ P L+ K ++EK +K N N +++++ +V +P T++A+ I
Sbjct: 61 DTIRVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPTILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154376|gb|ADF83097.1| ribosomal protein S3 [Triplasis purpurea]
Length = 193
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDNKIRNCIKNYIQKNRKKSSNRKIESDASSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154034|gb|ADF82926.1| ribosomal protein S3 [Eragrostis lugens]
gi|295154040|gb|ADF82929.1| ribosomal protein S3 [Enteropogon ramosus]
gi|295154100|gb|ADF82959.1| ribosomal protein S3 [Gouinia paraguayensis]
gi|295154148|gb|ADF82983.1| ribosomal protein S3 [Eragrostis pilgeri subsp. ancashensis]
gi|295154338|gb|ADF83078.1| ribosomal protein S3 [Vaseyochloa multinervosa]
gi|295154374|gb|ADF83096.1| ribosomal protein S3 [Tridens muticus]
gi|295154424|gb|ADF83121.1| ribosomal protein S3 [Microchloa kunthii]
gi|295154436|gb|ADF83127.1| ribosomal protein S3 [Lintonia nutans]
gi|295154492|gb|ADF83155.1| ribosomal protein S3 [Muhlenbergia ramulosa]
Length = 193
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKMESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|320090441|gb|ADW08492.1| ribosomal protein S3 [Muhlenbergia ciliata]
gi|320090539|gb|ADW08541.1| ribosomal protein S3 [Muhlenbergia pectinata]
Length = 193
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGTIEELEKDIQKEVNSVNHRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154428|gb|ADF83123.1| ribosomal protein S3 [Melanocenchris jacquemontii]
Length = 193
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKMESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKTDIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154476|gb|ADF83147.1| ribosomal protein S3 [Pereilema ciliatum]
Length = 193
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ +++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNFIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154130|gb|ADF82974.1| ribosomal protein S3 [Eragrostis lurida subsp. contracta]
gi|295154150|gb|ADF82984.1| ribosomal protein S3 [Eragrostis lurida]
Length = 193
Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIEKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154238|gb|ADF83028.1| ribosomal protein S3 [Cynodon plectostachyus]
gi|295154388|gb|ADF83103.1| ribosomal protein S3 [Triodia irritans var. laxispicata]
Length = 193
Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDNKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154256|gb|ADF83037.1| ribosomal protein S3 [Cleistogenes squarrosa]
gi|295154272|gb|ADF83045.1| ribosomal protein S3 [Cleistogenes mucronata]
Length = 193
Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats.
Identities = 60/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDQKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++E+ +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELERDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154216|gb|ADF83017.1| ribosomal protein S3 [Calamovilfa longifolia]
gi|295154264|gb|ADF83041.1| ribosomal protein S3 [Crypsis aculeata]
gi|295154266|gb|ADF83042.1| ribosomal protein S3 [Crypsis schoenoides]
gi|295154294|gb|ADF83056.1| ribosomal protein S3 [Sporobolus wrightii]
gi|295154298|gb|ADF83058.1| ribosomal protein S3 [Sporobolus rigens]
gi|295154308|gb|ADF83063.1| ribosomal protein S3 [Sporobolus cryptandrus]
gi|295154312|gb|ADF83065.1| ribosomal protein S3 [Spartina densiflora]
gi|295154332|gb|ADF83075.1| ribosomal protein S3 [Sporobolus indicus var. pyramidalis]
gi|295154462|gb|ADF83140.1| ribosomal protein S3 [Pogoneura biflora]
Length = 193
Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDASSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154058|gb|ADF82938.1| ribosomal protein S3 [Dignathia villosa]
Length = 193
Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKTDIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154346|gb|ADF83082.1| ribosomal protein S3 [Tuctoria greenei]
Length = 193
Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKKVNSVNQRLNIAIEKVKEPYREPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154030|gb|ADF82924.1| ribosomal protein S3 [Dignathia hirtella]
gi|295154036|gb|ADF82927.1| ribosomal protein S3 [Eragrostis lugens]
gi|295154042|gb|ADF82930.1| ribosomal protein S3 [Enteropogon macrostachyus]
gi|295154048|gb|ADF82933.1| ribosomal protein S3 [Distichlis spicata]
gi|295154050|gb|ADF82934.1| ribosomal protein S3 [Distichlis spicata]
gi|295154052|gb|ADF82935.1| ribosomal protein S3 [Distichlis scoparia]
gi|295154060|gb|ADF82939.1| ribosomal protein S3 [Eragrostis desertorum]
gi|295154086|gb|ADF82952.1| ribosomal protein S3 [Leptochloa dubia]
gi|295154090|gb|ADF82954.1| ribosomal protein S3 [Eragrostis soratensis]
gi|295154096|gb|ADF82957.1| ribosomal protein S3 [Hilaria cenchroides]
gi|295154106|gb|ADF82962.1| ribosomal protein S3 [Eustachys distichophylla]
gi|295154112|gb|ADF82965.1| ribosomal protein S3 [Eragrostis reptans]
gi|295154114|gb|ADF82966.1| ribosomal protein S3 [Eragrostis minor]
gi|295154118|gb|ADF82968.1| ribosomal protein S3 [Eragrostis pergracilis]
gi|295154120|gb|ADF82969.1| ribosomal protein S3 [Eragrostis cilianensis]
gi|295154124|gb|ADF82971.1| ribosomal protein S3 [Eragrostis eriopoda]
gi|295154138|gb|ADF82978.1| ribosomal protein S3 [Eragrostis dielsii]
gi|295154140|gb|ADF82979.1| ribosomal protein S3 [Eragrostis intermedia]
gi|295154142|gb|ADF82980.1| ribosomal protein S3 [Eragrostis nigricans]
gi|295154144|gb|ADF82981.1| ribosomal protein S3 [Eragrostis pastoensis]
gi|295154146|gb|ADF82982.1| ribosomal protein S3 [Eragrostis pectinacea]
gi|295154164|gb|ADF82991.1| ribosomal protein S3 [Apochiton burttii]
gi|295154170|gb|ADF82994.1| ribosomal protein S3 [Astrebla elymoides]
gi|295154172|gb|ADF82995.1| ribosomal protein S3 [Astrebla lappacea]
gi|295154174|gb|ADF82996.1| ribosomal protein S3 [Astrebla pectinata]
gi|295154182|gb|ADF83000.1| ribosomal protein S3 [Acrachne racemosa]
gi|295154212|gb|ADF83015.1| ribosomal protein S3 [Cynodon arcuatus]
gi|295154220|gb|ADF83019.1| ribosomal protein S3 [Brachyachne tenella]
gi|295154222|gb|ADF83020.1| ribosomal protein S3 [Brachyachne patentiflora]
gi|295154226|gb|ADF83022.1| ribosomal protein S3 [Brachyachne convergens]
gi|295154230|gb|ADF83024.1| ribosomal protein S3 [Cynodon transvaalensis]
gi|295154232|gb|ADF83025.1| ribosomal protein S3 [Cynodon plectostachyus]
gi|295154234|gb|ADF83026.1| ribosomal protein S3 [Cynodon pascuus]
gi|295154236|gb|ADF83027.1| ribosomal protein S3 [Cynodon maritimus]
gi|295154242|gb|ADF83030.1| ribosomal protein S3 [Coelachyrum poiflorum]
gi|295154244|gb|ADF83031.1| ribosomal protein S3 [Leptochloa filiformis]
gi|295154254|gb|ADF83036.1| ribosomal protein S3 [Cynodon hirsutus]
gi|295154258|gb|ADF83038.1| ribosomal protein S3 [Cynodon dactylon]
gi|295154262|gb|ADF83040.1| ribosomal protein S3 [Craspedorhachis africana]
gi|295154276|gb|ADF83047.1| ribosomal protein S3 [Tragus koelerioides]
gi|295154278|gb|ADF83048.1| ribosomal protein S3 [Tragus heptaneuron]
gi|295154280|gb|ADF83049.1| ribosomal protein S3 [Tragus berteronianus]
gi|295154282|gb|ADF83050.1| ribosomal protein S3 [Tragus berteronianus]
gi|295154284|gb|ADF83051.1| ribosomal protein S3 [Tragus australianus]
gi|295154320|gb|ADF83069.1| ribosomal protein S3 [Schoenefeldia transiens]
gi|295154322|gb|ADF83070.1| ribosomal protein S3 [Schoenefeldia gracilis]
gi|295154330|gb|ADF83074.1| ribosomal protein S3 [Jouvea pilosa]
gi|295154334|gb|ADF83076.1| ribosomal protein S3 [Triodia pungens]
gi|295154362|gb|ADF83090.1| ribosomal protein S3 [Tragus pedunculatus]
gi|295154364|gb|ADF83091.1| ribosomal protein S3 [Triodia bynoei]
gi|295154378|gb|ADF83098.1| ribosomal protein S3 [Triodia brizoides]
gi|295154380|gb|ADF83099.1| ribosomal protein S3 [Triodia rigidissima]
gi|295154382|gb|ADF83100.1| ribosomal protein S3 [Triodia desertorum]
gi|295154386|gb|ADF83102.1| ribosomal protein S3 [Triodia intermedia]
gi|295154390|gb|ADF83104.1| ribosomal protein S3 [Triodia melvillei]
gi|295154392|gb|ADF83105.1| ribosomal protein S3 [Tragus mongolorum]
gi|295154394|gb|ADF83106.1| ribosomal protein S3 [Triodia basedowii]
gi|295154396|gb|ADF83107.1| ribosomal protein S3 [Microchloa caffra]
gi|295154400|gb|ADF83109.1| ribosomal protein S3 [Muhlenbergia brandegeei]
gi|295154406|gb|ADF83112.1| ribosomal protein S3 [Muhlenbergia appressa]
gi|295154412|gb|ADF83115.1| ribosomal protein S3 [Muhlenbergia schreberi]
gi|295154420|gb|ADF83119.1| ribosomal protein S3 [Monelytrum luederitzianum]
gi|295154440|gb|ADF83129.1| ribosomal protein S3 [Lepturus repens]
gi|295154444|gb|ADF83131.1| ribosomal protein S3 [Lepturus gasparricensis]
gi|295154446|gb|ADF83132.1| ribosomal protein S3 [Lepturus acutiglumis]
gi|295154450|gb|ADF83134.1| ribosomal protein S3 [Leptochloa viscida]
gi|295154452|gb|ADF83135.1| ribosomal protein S3 [Leptochloa fusca subsp. uninervia]
gi|295154460|gb|ADF83139.1| ribosomal protein S3 [Polevansia rigida]
gi|295154474|gb|ADF83146.1| ribosomal protein S3 [Pereilema crinitum]
gi|295154478|gb|ADF83148.1| ribosomal protein S3 [Pereilema beyrichianum]
gi|295154482|gb|ADF83150.1| ribosomal protein S3 [Orinus thoroldii]
gi|295154488|gb|ADF83153.1| ribosomal protein S3 [Willkommia sarmentosa]
gi|295154490|gb|ADF83154.1| ribosomal protein S3 [Muhlenbergia racemosa]
gi|295154498|gb|ADF83158.1| ribosomal protein S3 [Orinus thoroldii]
gi|295154502|gb|ADF83160.1| ribosomal protein S3 [Orinus kokonorica]
gi|320090415|gb|ADW08479.1| ribosomal protein S3 [Muhlenbergia andina]
gi|320090435|gb|ADW08489.1| ribosomal protein S3 [Muhlenbergia californica]
gi|320090445|gb|ADW08494.1| ribosomal protein S3 [Muhlenbergia curtifolia]
gi|320090481|gb|ADW08512.1| ribosomal protein S3 [Muhlenbergia glauca]
gi|320090483|gb|ADW08513.1| ribosomal protein S3 [Muhlenbergia glauca]
gi|320090489|gb|ADW08516.1| ribosomal protein S3 [Muhlenbergia himalayensis]
gi|320090491|gb|ADW08517.1| ribosomal protein S3 [Muhlenbergia huegelii]
gi|320090501|gb|ADW08522.1| ribosomal protein S3 [Muhlenbergia japonica]
gi|320090503|gb|ADW08523.1| ribosomal protein S3 [Muhlenbergia japonica]
gi|320090521|gb|ADW08532.1| ribosomal protein S3 [Muhlenbergia mexicana]
gi|320090523|gb|ADW08533.1| ribosomal protein S3 [Muhlenbergia mexicana var. filiformis]
gi|320090525|gb|ADW08534.1| ribosomal protein S3 [Muhlenbergia microsperma]
gi|320090541|gb|ADW08542.1| ribosomal protein S3 [Muhlenbergia polycaulis]
gi|320090543|gb|ADW08543.1| ribosomal protein S3 [Muhlenbergia porteri]
gi|320090555|gb|ADW08549.1| ribosomal protein S3 [Muhlenbergia ramosa]
gi|320090575|gb|ADW08559.1| ribosomal protein S3 [Muhlenbergia sobolifera]
gi|320090579|gb|ADW08561.1| ribosomal protein S3 [Muhlenbergia spiciformis]
gi|320090591|gb|ADW08567.1| ribosomal protein S3 [Muhlenbergia tenuiflora]
gi|320090593|gb|ADW08568.1| ribosomal protein S3 [Muhlenbergia tenuifolia]
gi|320090597|gb|ADW08570.1| ribosomal protein S3 [Muhlenbergia thurberi]
Length = 193
Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154344|gb|ADF83081.1| ribosomal protein S3 [Uniola condensata]
Length = 193
Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats.
Identities = 62/193 (32%), Positives = 103/193 (53%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++++ P L+ K ++EK +K N N +++S+ +V +P T++A+ I
Sbjct: 61 DTIHVLIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNISIEKVKEPYRQPTILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|320090451|gb|ADW08497.1| ribosomal protein S3 [Muhlenbergia distichophylla]
Length = 193
Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSLNRKIESDSNSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154102|gb|ADF82960.1| ribosomal protein S3 [Eustachys petraea]
Length = 193
Score = 142 bits (358), Expect = 4e-32, Method: Composition-based stats.
Identities = 60/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDPSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + G+K+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGIKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|320090561|gb|ADW08552.1| ribosomal protein S3 [Muhlenbergia reverchonii]
gi|320090569|gb|ADW08556.1| ribosomal protein S3 [Muhlenbergia sericea]
gi|320090617|gb|ADW08580.1| ribosomal protein S3 [Muhlenbergia x involuta]
Length = 193
Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSNSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNKRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154188|gb|ADF83003.1| ribosomal protein S3 [Blepharoneuron shepherdii]
gi|320090411|gb|ADW08477.1| ribosomal protein S3 [Blepharoneuron shepherdii]
Length = 193
Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSNSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKAVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154176|gb|ADF82997.1| ribosomal protein S3 [Astrebla squarrosa]
Length = 193
Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNXKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154434|gb|ADF83126.1| ribosomal protein S3 [Lopholepis ornithocephala]
gi|295154466|gb|ADF83142.1| ribosomal protein S3 [Perotis rara]
gi|295154470|gb|ADF83144.1| ribosomal protein S3 [Perotis hordeiformis]
gi|295154472|gb|ADF83145.1| ribosomal protein S3 [Perotis hildebrandtii]
Length = 193
Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSINQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|320090493|gb|ADW08518.1| ribosomal protein S3 [Muhlenbergia implicata]
Length = 193
Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++ + +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIVIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKTDIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154074|gb|ADF82946.1| ribosomal protein S3 [Chloris virgata]
gi|295154076|gb|ADF82947.1| ribosomal protein S3 [Chloris virgata]
gi|295154082|gb|ADF82950.1| ribosomal protein S3 [Chloris barbata]
Length = 193
Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKMESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKNIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154056|gb|ADF82937.1| ribosomal protein S3 [Chaboissaea subbiflora]
gi|295154122|gb|ADF82970.1| ribosomal protein S3 [Chaboissaea ligulata]
gi|295154214|gb|ADF83016.1| ribosomal protein S3 [Chaboissaea atacamensis]
gi|295154324|gb|ADF83071.1| ribosomal protein S3 [Schedonnardus paniculatus]
gi|295154366|gb|ADF83092.1| ribosomal protein S3 [Redfieldia flexuosa]
gi|295154404|gb|ADF83111.1| ribosomal protein S3 [Muhlenbergia arenacea]
gi|295154430|gb|ADF83124.1| ribosomal protein S3 [Lycurus setosus]
gi|295154432|gb|ADF83125.1| ribosomal protein S3 [Lycurus setosus]
gi|295154484|gb|ADF83151.1| ribosomal protein S3 [Muhlenbergia flaviseta]
gi|295154500|gb|ADF83159.1| ribosomal protein S3 [Muhlenbergia uniflora]
gi|320090431|gb|ADW08487.1| ribosomal protein S3 [Muhlenbergia asperifolia]
gi|320090447|gb|ADW08495.1| ribosomal protein S3 [Muhlenbergia cuspidata]
gi|320090459|gb|ADW08501.1| ribosomal protein S3 [Muhlenbergia durangensis]
gi|320090467|gb|ADW08505.1| ribosomal protein S3 [Muhlenbergia fastigiata]
gi|320090497|gb|ADW08520.1| ribosomal protein S3 [Muhlenbergia jaime-hintonii]
gi|320090537|gb|ADW08540.1| ribosomal protein S3 [Muhlenbergia palmirensis]
gi|320090559|gb|ADW08551.1| ribosomal protein S3 [Muhlenbergia repens]
gi|320090563|gb|ADW08553.1| ribosomal protein S3 [Muhlenbergia richardsonis]
gi|320090599|gb|ADW08571.1| ribosomal protein S3 [Muhlenbergia torreyana]
gi|320090601|gb|ADW08572.1| ribosomal protein S3 [Muhlenbergia uniflora]
gi|320090603|gb|ADW08573.1| ribosomal protein S3 [Muhlenbergia utilis]
gi|320090607|gb|ADW08575.1| ribosomal protein S3 [Muhlenbergia villiflora var. villosa]
gi|320090615|gb|ADW08579.1| ribosomal protein S3 [Muhlenbergia wrightii]
Length = 193
Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++ + +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIVIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154116|gb|ADF82967.1| ribosomal protein S3 [Eragrostiella leioptera]
Length = 193
Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 60/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++ + + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYILKNRKKSLNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K + N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVHSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154350|gb|ADF83084.1| ribosomal protein S3 [Triraphis ramosissima]
gi|295154352|gb|ADF83085.1| ribosomal protein S3 [Triraphis purpurea]
gi|295154354|gb|ADF83086.1| ribosomal protein S3 [Triraphis mollis]
gi|295154356|gb|ADF83087.1| ribosomal protein S3 [Triraphis andropogonoides]
gi|295154510|gb|ADF83164.1| ribosomal protein S3 [Neyraudia reynaudiana]
Length = 193
Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 62/193 (32%), Positives = 103/193 (53%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P T++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGTIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPTILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154104|gb|ADF82961.1| ribosomal protein S3 [Eustachys paspaloides]
Length = 193
Score = 142 bits (357), Expect = 5e-32, Method: Composition-based stats.
Identities = 60/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSGNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + G+K+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGIKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154046|gb|ADF82932.1| ribosomal protein S3 [Eleusine indica]
gi|295154398|gb|ADF83108.1| ribosomal protein S3 [Muhlenbergia emersleyi]
gi|295154494|gb|ADF83156.1| ribosomal protein S3 [Muhlenbergia rigida]
gi|295154496|gb|ADF83157.1| ribosomal protein S3 [Muhlenbergia rigens]
gi|295154514|gb|ADF83166.1| ribosomal protein S3 [Muhlenbergia macroura]
gi|320090417|gb|ADW08480.1| ribosomal protein S3 [Muhlenbergia angustata]
gi|320090419|gb|ADW08481.1| ribosomal protein S3 [Muhlenbergia angustata]
gi|320090423|gb|ADW08483.1| ribosomal protein S3 [Muhlenbergia argentea]
gi|320090425|gb|ADW08484.1| ribosomal protein S3 [Muhlenbergia arizonica]
gi|320090429|gb|ADW08486.1| ribosomal protein S3 [Muhlenbergia articulata]
gi|320090437|gb|ADW08490.1| ribosomal protein S3 [Muhlenbergia capillaris]
gi|320090439|gb|ADW08491.1| ribosomal protein S3 [Muhlenbergia caxamarcensis]
gi|320090449|gb|ADW08496.1| ribosomal protein S3 [Muhlenbergia depauperata]
gi|320090453|gb|ADW08498.1| ribosomal protein S3 [Muhlenbergia dubia]
gi|320090455|gb|ADW08499.1| ribosomal protein S3 [Muhlenbergia dubia]
gi|320090461|gb|ADW08502.1| ribosomal protein S3 [Muhlenbergia elongata]
gi|320090465|gb|ADW08504.1| ribosomal protein S3 [Muhlenbergia expansa]
gi|320090479|gb|ADW08511.1| ribosomal protein S3 [Muhlenbergia gigantea]
gi|320090485|gb|ADW08514.1| ribosomal protein S3 [Muhlenbergia grandis]
gi|320090487|gb|ADW08515.1| ribosomal protein S3 [Muhlenbergia gypsophila]
gi|320090495|gb|ADW08519.1| ribosomal protein S3 [Muhlenbergia iridifolia]
gi|320090499|gb|ADW08521.1| ribosomal protein S3 [Muhlenbergia jaliscana]
gi|320090507|gb|ADW08525.1| ribosomal protein S3 [Muhlenbergia lindheimeri]
gi|320090509|gb|ADW08526.1| ribosomal protein S3 [Muhlenbergia longiglumis]
gi|320090511|gb|ADW08527.1| ribosomal protein S3 [Muhlenbergia longiligula]
gi|320090513|gb|ADW08528.1| ribosomal protein S3 [Muhlenbergia lucida]
gi|320090515|gb|ADW08529.1| ribosomal protein S3 [Muhlenbergia lucida]
gi|320090519|gb|ADW08531.1| ribosomal protein S3 [Muhlenbergia maxima]
gi|320090527|gb|ADW08535.1| ribosomal protein S3 [Muhlenbergia minutissima]
gi|320090531|gb|ADW08537.1| ribosomal protein S3 [Muhlenbergia mucronata]
gi|320090533|gb|ADW08538.1| ribosomal protein S3 [Muhlenbergia nigra]
gi|320090535|gb|ADW08539.1| ribosomal protein S3 [Muhlenbergia palmeri]
gi|320090545|gb|ADW08544.1| ribosomal protein S3 [Muhlenbergia pubescens]
gi|320090547|gb|ADW08545.1| ribosomal protein S3 [Muhlenbergia pubescens]
gi|320090549|gb|ADW08546.1| ribosomal protein S3 [Muhlenbergia pubigluma]
gi|320090551|gb|ADW08547.1| ribosomal protein S3 [Muhlenbergia purpusii]
gi|320090565|gb|ADW08554.1| ribosomal protein S3 [Muhlenbergia rigida]
gi|320090567|gb|ADW08555.1| ribosomal protein S3 [Muhlenbergia robusta]
gi|320090571|gb|ADW08557.1| ribosomal protein S3 [Muhlenbergia setifolia]
gi|320090573|gb|ADW08558.1| ribosomal protein S3 [Muhlenbergia sinuosa]
gi|320090577|gb|ADW08560.1| ribosomal protein S3 [Muhlenbergia speciosa]
gi|320090583|gb|ADW08563.1| ribosomal protein S3 [Muhlenbergia stricta]
gi|320090585|gb|ADW08564.1| ribosomal protein S3 [Muhlenbergia subaristata]
gi|320090595|gb|ADW08569.1| ribosomal protein S3 [Muhlenbergia texana]
gi|320090605|gb|ADW08574.1| ribosomal protein S3 [Muhlenbergia versicolor]
gi|320090613|gb|ADW08578.1| ribosomal protein S3 [Muhlenbergia virletii]
Length = 193
Score = 142 bits (357), Expect = 5e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSNSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154274|gb|ADF83046.1| ribosomal protein S3 [Sporobolus lasiophyllus]
Length = 193
Score = 142 bits (357), Expect = 5e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 103/193 (53%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDASSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K+ ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKEAIEELEKDIQKEVNSVNKRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKITGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154072|gb|ADF82945.1| ribosomal protein S3 [Chrysochloa hindsii]
gi|295154160|gb|ADF82989.1| ribosomal protein S3 [Allolepis texana]
gi|295154162|gb|ADF82990.1| ribosomal protein S3 [Allolepis texana]
Length = 193
Score = 142 bits (357), Expect = 5e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNVLAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154024|gb|ADF82921.1| ribosomal protein S3 [Zoysia macrantha]
gi|295154026|gb|ADF82922.1| ribosomal protein S3 [Zoysia macrantha subsp. walshii]
gi|295154028|gb|ADF82923.1| ribosomal protein S3 [Zoysia japonica]
Length = 193
Score = 142 bits (357), Expect = 5e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDASSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A+ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIDLTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154384|gb|ADF83101.1| ribosomal protein S3 [Triodia fitzgeraldii]
Length = 193
Score = 142 bits (357), Expect = 5e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 103/193 (53%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N ++++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQKLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|320090457|gb|ADW08500.1| ribosomal protein S3 [Muhlenbergia dumosa]
Length = 193
Score = 142 bits (357), Expect = 5e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKRSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154098|gb|ADF82958.1| ribosomal protein S3 [Gymnopogon grandiflorus]
gi|295154154|gb|ADF82986.1| ribosomal protein S3 [Aeluropus lagopoides]
gi|295154156|gb|ADF82987.1| ribosomal protein S3 [Aeluropus littoralis]
gi|295154158|gb|ADF82988.1| ribosomal protein S3 [Aeluropus pungens]
Length = 193
Score = 142 bits (357), Expect = 5e-32, Method: Composition-based stats.
Identities = 62/193 (32%), Positives = 103/193 (53%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P T++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPTILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154092|gb|ADF82955.1| ribosomal protein S3 [Willkommia texana]
Length = 193
Score = 142 bits (357), Expect = 5e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAKPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154062|gb|ADF82940.1| ribosomal protein S3 [Dasyochloa pulchella]
Length = 193
Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIEKNRKKSSNKKIQSDSICEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DKIHVIIHIGFPNLLKKKGAIEELEKNIQKEVNSVNQRLNIAIEKVKEPYRQPNVLAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A+ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIFLTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|320090433|gb|ADW08488.1| ribosomal protein S3 [Muhlenbergia brevis]
Length = 193
Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSNSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECTKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154166|gb|ADF82992.1| ribosomal protein S3 [Aristida gypsophila]
gi|295154168|gb|ADF82993.1| ribosomal protein S3 [Aristida scribneriana]
Length = 193
Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDNKIRNCIKNYIQKNRKKGSNRKIEADSSSEVITDIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKNLQKEVNSVNQRLNIAIEKVKEPYRQPKILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154402|gb|ADF83110.1| ribosomal protein S3 [Muhlenbergia arenicola]
gi|295154516|gb|ADF83167.1| ribosomal protein S3 [Muhlenbergia torreyi]
gi|320090477|gb|ADW08510.1| ribosomal protein S3 [Muhlenbergia fragilis]
Length = 193
Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats.
Identities = 60/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSNSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ R+ FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRISFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|320090463|gb|ADW08503.1| ribosomal protein S3 [Muhlenbergia eludens]
gi|320090473|gb|ADW08508.1| ribosomal protein S3 [Muhlenbergia flavida]
Length = 193
Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats.
Identities = 60/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSNSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ R+ FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRISFRKAMKKAIELTKKTDIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154410|gb|ADF83114.1| ribosomal protein S3 [Muhlenbergia montana]
gi|320090469|gb|ADW08506.1| ribosomal protein S3 [Muhlenbergia filiculmis]
gi|320090505|gb|ADW08524.1| ribosomal protein S3 [Muhlenbergia jonesii]
gi|320090529|gb|ADW08536.1| ribosomal protein S3 [Muhlenbergia montana]
gi|320090553|gb|ADW08548.1| ribosomal protein S3 [Muhlenbergia quadridentata]
gi|320090581|gb|ADW08562.1| ribosomal protein S3 [Muhlenbergia straminea]
gi|320090609|gb|ADW08576.1| ribosomal protein S3 [Muhlenbergia virescens]
gi|320090611|gb|ADW08577.1| ribosomal protein S3 [Muhlenbergia virescens]
Length = 193
Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSKGLQEDKKIRNCIKNYIEKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++ + +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIVIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|320090517|gb|ADW08530.1| ribosomal protein S3 [Muhlenbergia majalcensis]
Length = 193
Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats.
Identities = 60/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSNSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ R+ FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRISFRKAMKKAIELTKKEDIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154442|gb|ADF83130.1| ribosomal protein S3 [Lepturus radicans]
Length = 193
Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLXEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154094|gb|ADF82956.1| ribosomal protein S3 [Hilaria cenchroides]
gi|320090475|gb|ADW08509.1| ribosomal protein S3 [Muhlenbergia flexuosa]
Length = 193
Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIRGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|320090427|gb|ADW08485.1| ribosomal protein S3 [Muhlenbergia arsenei]
Length = 193
Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIKELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154426|gb|ADF83122.1| ribosomal protein S3 [Muhlenbergia peruviana]
gi|320090443|gb|ADW08493.1| ribosomal protein S3 [Muhlenbergia crispiseta]
Length = 193
Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSKGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++ + +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIVIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154416|gb|ADF83117.1| ribosomal protein S3 [Mosdenia phleoides]
Length = 193
Score = 141 bits (356), Expect = 7e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAKPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSINQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|320090557|gb|ADW08550.1| ribosomal protein S3 [Muhlenbergia reederorum]
Length = 193
Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSNSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLNNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|320090421|gb|ADW08482.1| ribosomal protein S3 [Muhlenbergia annua]
Length = 193
Score = 141 bits (355), Expect = 8e-32, Method: Composition-based stats.
Identities = 60/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSNSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVQEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ R+ FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRISFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154132|gb|ADF82975.1| ribosomal protein S3 [Eragrostis weberbaueri]
Length = 193
Score = 141 bits (355), Expect = 8e-32, Method: Composition-based stats.
Identities = 60/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDPSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R E +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAESIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154290|gb|ADF83054.1| ribosomal protein S3 [Tetrapogon mossambicensis]
Length = 193
Score = 141 bits (355), Expect = 9e-32, Method: Composition-based stats.
Identities = 60/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKMESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R E +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAESIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154136|gb|ADF82977.1| ribosomal protein S3 [Eragrostis tenuifolia]
Length = 193
Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HYSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|225024797|ref|ZP_03713989.1| hypothetical protein EIKCOROL_01684 [Eikenella corrodens ATCC
23834]
gi|224942400|gb|EEG23609.1| hypothetical protein EIKCOROL_01684 [Eikenella corrodens ATCC
23834]
Length = 126
Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 60/101 (59%), Positives = 80/101 (79%)
Query: 106 VPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRT 165
+ KPE++A +IA IAQQLE+RV FRRAMKRA+Q+AMR GA G+K++ SGRLNGA+++R+
Sbjct: 1 IRKPELDAQVIADGIAQQLEKRVQFRRAMKRAMQNAMRAGAKGIKIMTSGRLNGADIARS 60
Query: 166 ECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
E Y EGRVPL TLRA ++Y T+ A T YG G+KV+V +
Sbjct: 61 EWYREGRVPLHTLRAAVEYATSEAHTTYGVIGLKVWVYKGE 101
>gi|295154438|gb|ADF83128.1| ribosomal protein S3 [Lepturus schlechteri]
Length = 193
Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLPEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154054|gb|ADF82936.1| ribosomal protein S3 [Distichlis humilis]
Length = 193
Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 60/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+A+K+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAIKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154414|gb|ADF83116.1| ribosomal protein S3 [Muhlenbergia gigantea]
Length = 193
Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 60/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSNSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
+DY T Y
Sbjct: 181 KMDYCCYPIRTIY 193
>gi|295154210|gb|ADF83014.1| ribosomal protein S3 [Austrochloris dichanthioides]
Length = 193
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +H+++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLHIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T +
Sbjct: 181 KIDYCCYPIRTIH 193
>gi|295154186|gb|ADF83002.1| ribosomal protein S3 [Blepharidachne bigelovii]
Length = 193
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNKKIESDSIYEVITHIEIKKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DQIHVIIHIGLPNLLKKKGAIEELEKDIQKEVNSGNQRLNIAIEKVKEPYKQPNVLAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A+ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIFLTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154292|gb|ADF83055.1| ribosomal protein S3 [Swallenia alexandrae]
Length = 193
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSIFEVITHIEIKKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DKIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A+ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIFLTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|11466634|ref|NP_066317.1| ribosomal protein S3 [Malawimonas jakobiformis]
gi|10178672|gb|AAG13684.1|AF295546_10 ribosomal protein S3 [Malawimonas jakobiformis]
Length = 215
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 62/215 (28%), Positives = 101/215 (46%), Gaps = 12/215 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--VAKILIE 58
MGQ IN L N W S+W+ + Y L+ED+ IR Y++ K K +I+
Sbjct: 1 MGQSINTTGLLLTHNKYWQSKWY-NDNNYIFSLYEDILIRNYIKNVFKNLNLFYGKCVIK 59
Query: 59 RTHKNCRI--IVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEV-----PKPEI 111
R+ + I +Y + II K +K++ + S L+ N + P
Sbjct: 60 RSIQKIYIYINIYKKKRKNIINTKDKRKLINKKEIKQILQSLTKLTNNRIILIIKPTNIF 119
Query: 112 NATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGAD--GVKVIASGRLNGAELSRTECYL 169
+A L+AQ I+++LE R F K+ + + G ++ SGR NG +++ + +
Sbjct: 120 DAQLLAQYISRKLEIRNSFLSIFKKILNKINKNKKIYKGFRIQCSGRPNGNDMAYIQWFK 179
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
G++PL T IDY A T YG G+KV++S
Sbjct: 180 YGQIPLHTYNYKIDYAYTTALTKYGLSGVKVWLSF 214
>gi|295154480|gb|ADF83149.1| ribosomal protein S3 [Pappophorum pappiferum]
Length = 193
Score = 139 bits (351), Expect = 3e-31, Method: Composition-based stats.
Identities = 60/193 (31%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKTDIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
I+Y T Y
Sbjct: 181 KINYCCYPIRTIY 193
>gi|57230948|gb|AAW47232.1| ribosomal protein S3 [Columbia Basin potato purple top phytoplasma]
Length = 173
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 63/172 (36%), Positives = 100/172 (58%), Gaps = 4/172 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+A + +L+ ED +IR ++ H +A +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYAEDKQVPSLVCEDFQIRNLIKNHYPKATISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K I +Y+++ GLI G + + K+ N+ +I +++ EV A L+
Sbjct: 61 KKTNDEVIEIELYTSKIGLIQGPDNKNKNSLVSKIENLIKKKIQINIFEVKVVNKIAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168
AQ+IA QL++R ++ K AVQ A+R G G+K+I +GRL GAE +R E
Sbjct: 121 AQNIAIQLQQRAFYKAVQKSAVQKALRSGVKGIKIIITGRLGGAEKARQESI 172
>gi|295154184|gb|ADF83001.1| ribosomal protein S3 [Blepharidachne benthamiana]
Length = 193
Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats.
Identities = 60/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNKKIESDSIYEVITHIEIKKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K + N +++++ +V +P ++A+ I
Sbjct: 61 DQIHVIIHIGLPNLLKKKGAIEELEKDIQKEVSSGNQRLNIAIEKVKEPYKQPNVLAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A+ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIFLTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|295154486|gb|ADF83152.1| ribosomal protein S3 [Munroa andina]
gi|295154504|gb|ADF83161.1| ribosomal protein S3 [Munroa argentina]
Length = 195
Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats.
Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 19/195 (9%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIEKNRKKSSNKKIESDSICEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DKIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNVLAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAM--RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
A QL+ RV FR+AMK+A+ GVK+ +GRL G E++R EC +GR+PLQT+
Sbjct: 121 AFQLKNRVSFRKAMKKAIFLTKKAEADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTI 180
Query: 179 RAHIDYGTAVAETAY 193
RA IDY T Y
Sbjct: 181 RAKIDYCCYPIRTIY 195
>gi|295154180|gb|ADF82999.1| ribosomal protein S3 [Bealia mexicana]
Length = 195
Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats.
Identities = 62/195 (31%), Positives = 101/195 (51%), Gaps = 19/195 (9%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSNSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATLIAQ 118
+I++ P L+ K ++EK +K N N I +++ +V +P ++A+
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIDIAIEKVKEPYRQPNILAE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
IA QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+
Sbjct: 121 YIAFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTI 180
Query: 179 RAHIDYGTAVAETAY 193
RA IDY T Y
Sbjct: 181 RAKIDYCCYPIRTIY 195
>gi|295154088|gb|ADF82953.1| ribosomal protein S3 [Dinebra retroflexa]
Length = 192
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 59/189 (31%), Positives = 100/189 (52%), Gaps = 17/189 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVA 189
IDY
Sbjct: 181 KIDYCCYPI 189
>gi|295154190|gb|ADF83004.1| ribosomal protein S3 [Blepharoneuron tricholepis]
Length = 195
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 61/195 (31%), Positives = 101/195 (51%), Gaps = 19/195 (9%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSNSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKAVNSVNRRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRF--GADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
A QL+ RV FR+AMK+A++ GVK+ +GRL G E++R EC +GR+PLQT+
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKNKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTI 180
Query: 179 RAHIDYGTAVAETAY 193
RA IDY T Y
Sbjct: 181 RAKIDYCCYPIRTIY 195
>gi|295154318|gb|ADF83068.1| ribosomal protein S3 [Scleropogon brevifolius]
Length = 195
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 60/195 (30%), Positives = 100/195 (51%), Gaps = 19/195 (9%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED+KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDIKIRNCIKNYIQKNSKKSSNRKIESDPSFEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATLIAQ 118
+ ++ P L+ K ++EK +K N N I +++ +V +P ++A+
Sbjct: 61 DTIHVRIHIGFPNLLNKKGAIEELEKDIQKEVNSVNQRLNIDIAIEKVKEPYRQPNILAE 120
Query: 119 SIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
IA QL+ RV FR+AMK+A+ + GVK+ +GRL G +++R EC +GR+PLQT+
Sbjct: 121 FIAFQLKNRVSFRKAMKKAILLTKKTDIKGVKIKMAGRLGGRDIARAECIKKGRLPLQTI 180
Query: 179 RAHIDYGTAVAETAY 193
RA IDY T Y
Sbjct: 181 RAKIDYCCYPIRTIY 195
>gi|239995006|ref|ZP_04715530.1| 30S ribosomal protein S3 [Alteromonas macleodii ATCC 27126]
Length = 151
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 52/123 (42%), Positives = 84/123 (68%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG++ W S W+A ++Y L+ D ++R+YL LK A ++KI+IER
Sbjct: 1 MGQKVHPTGIRLGISKPWTSTWYANTADYADNLYNDHQVRQYLTKQLKNASLSKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K+ R+ +++ARPG++IGKKG D+EK+R +S + +++ EV KPE++ L+A SI
Sbjct: 61 AKSIRVTIHTARPGVVIGKKGEDVEKLRNYVSKLAGVPAQINIAEVRKPELDGQLVADSI 120
Query: 121 AQQ 123
+ Q
Sbjct: 121 SSQ 123
>gi|295154108|gb|ADF82963.1| ribosomal protein S3 [Erioneuron nealleyi]
gi|295154110|gb|ADF82964.1| ribosomal protein S3 [Erioneuron avenaceum]
Length = 195
Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 61/195 (31%), Positives = 101/195 (51%), Gaps = 19/195 (9%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSIFEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DKIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNVLAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRF--GADGVKVIASGRLNGAELSRTECYLEGRVPLQTL 178
A QL+ RV FR+AMK+A+ + GVK+ +GRL G E++R EC +GR+PLQT+
Sbjct: 121 AFQLKNRVSFRKAMKKAIFLTKKTEADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTI 180
Query: 179 RAHIDYGTAVAETAY 193
RA IDY T Y
Sbjct: 181 RAKIDYCCYPIRTIY 195
>gi|313606535|gb|EFR83356.1| ribosomal protein S3 [Listeria monocytogenes FSL F2-208]
Length = 108
Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 51/108 (47%), Positives = 71/108 (65%)
Query: 112 NATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEG 171
+A L+A++IA+QLE RV FRRA K+A+Q MR GA G+K SGRL GA+++R E Y EG
Sbjct: 1 DAKLVAENIARQLEGRVSFRRAQKQAIQRTMRAGAKGIKTQVSGRLGGADIARAEHYSEG 60
Query: 172 RVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAE 219
VPL TLRA IDY A+T YG G+KV++ + + + + +
Sbjct: 61 TVPLHTLRADIDYAWEEADTTYGKLGVKVWIYRGEVLPTKKNNVEGGK 108
>gi|217075320|gb|ACJ86020.1| unknown [Medicago truncatula]
Length = 121
Score = 135 bits (339), Expect = 6e-30, Method: Composition-based stats.
Identities = 48/119 (40%), Positives = 76/119 (63%)
Query: 87 IRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGA 146
+ KK N +I+++ +P + ++A+ IA QL+ R+ FR+A+K+A++ A + G
Sbjct: 1 MYKKNFNCVTRKINITSTRIPNAYSDPNILAEFIAGQLKNRISFRKAIKKAIELAEQAGT 60
Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
GV+V +GR++G E++R E EGRVPLQT+RA IDY + T YG GIKV++ L
Sbjct: 61 KGVQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYPVRTIYGVLGIKVWIFLN 119
>gi|116335052|ref|YP_802547.1| ribosomal protein S3 [Candidatus Carsonella ruddii PV]
gi|123320755|sp|Q05FJ0|RS3_CARRP RecName: Full=30S ribosomal protein S3
gi|116235333|dbj|BAF35181.1| ribosomal protein S3 [Candidatus Carsonella ruddii PV]
Length = 203
Score = 134 bits (338), Expect = 8e-30, Method: Composition-based stats.
Identities = 53/205 (25%), Positives = 98/205 (47%), Gaps = 6/205 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG+KINPILFRL N ++S W+ + L D+ IRE ++ + ++ I I +
Sbjct: 1 MGKKINPILFRLKKNTVYHSLWYTFKKNFCYYLKCDILIREIIRRNFLFINLSYIDIIIS 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +Y + ++ ++S + + L+ V +NA IA ++
Sbjct: 61 -NKLTINLYINNVDQFNIIENY-LDVFVFQISKILKKNVILNF--VFNHVLNAKNIAYNV 116
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
Q+ + ++ +K + G K+ SGRL G +++R E L GR+PL T++
Sbjct: 117 VNQILNKNSIKKIIKE--ELLKNRKNFGCKIQISGRLEGVDIARKEWSLIGRIPLHTIKY 174
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLR 205
+++Y T YG G+K+++ +
Sbjct: 175 NLEYYQCETLTQYGILGVKIWLFKK 199
>gi|27734531|sp|Q9AIF9|RS3_CARRU RecName: Full=30S ribosomal protein S3
gi|13272304|gb|AAK17087.1|AF274444_17 ribosomal protein S3 [Candidatus Carsonella ruddii]
Length = 203
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 54/205 (26%), Positives = 98/205 (47%), Gaps = 6/205 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG+KINPILFRL N ++S W+ + L D+ IRE ++ + ++ I I +
Sbjct: 1 MGKKINPILFRLKKNTVYHSLWYTFKKNFCYYLKCDILIREIIRRNFLFINLSYIDIIIS 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +Y + ++ ++S + + L+ V +NA IA ++
Sbjct: 61 -NKLTINLYINNVDQFNIIENY-LDVFVFQISKILKKNVILNF--VFNHVLNAKNIAYNV 116
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
Q+ + ++ +K + G K+ SGRL G +++R E L GR+PL T++
Sbjct: 117 VNQILNKNSIKKIIKE--ELLKNRKNFGCKIQISGRLEGVDIARKEWSLIGRIPLHTIKY 174
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLR 205
+++Y T YG GIK+++ +
Sbjct: 175 NLEYYQCETLTQYGILGIKIWLFKK 199
>gi|283050665|gb|ADB07764.1| ribosomal protein S3 [Leersia oryzoides]
gi|283050669|gb|ADB07767.1| ribosomal protein S3 [Leersia perrieri]
gi|283050673|gb|ADB07770.1| ribosomal protein S3 [Leersia hexandra]
Length = 166
Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 17/166 (10%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIE 60
Query: 52 -------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSV 103
+ I I++ +I++ P L+ K ++EK +K N N +++ V
Sbjct: 61 SDSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEVNSVNQRLNIGV 120
Query: 104 NEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGV 149
+V +P ++A+ +A QL+ RV FR+AMK+A++ + GV
Sbjct: 121 EKVKEPYRQPNILAEYMAFQLKNRVSFRKAMKKAIELTKKADIKGV 166
>gi|295154224|gb|ADF83021.1| ribosomal protein S3 [Brachyachne fibrosa]
gi|295154506|gb|ADF83162.1| ribosomal protein S3 [Neesiochloa barbata]
Length = 193
Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 62/193 (32%), Positives = 102/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
II++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHIIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
IDY T Y
Sbjct: 181 KIDYCCYPIRTIY 193
>gi|253795621|ref|YP_003038717.1| putative 30S ribosomal subunit protein S3 [Candidatus Hodgkinia
cicadicola Dsem]
gi|253739929|gb|ACT34264.1| putative 30S ribosomal subunit protein S3 [Candidatus Hodgkinia
cicadicola Dsem]
Length = 226
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 54/227 (23%), Positives = 102/227 (44%), Gaps = 3/227 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG K NPI RL V W FARG +Y ++ + K++ YL + G+ I++
Sbjct: 1 MGNKTNPIGVRLVVRGHWEDAVFARGRDYAEAVYLNHKVKAYLATRYRACGMISSAIKQE 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+++ + G +++ L + LSV + + IA +
Sbjct: 61 GNAYVVVINTDDVDAFFASAGQSADEMADALKLWFWPDASLSVRRLDDAASHPVNIAFKL 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
+ + ++K+ ++ + G+K +GR+ G ++++T ++EGR+PL TL A
Sbjct: 121 MDDVATNSTVKASVKQMAKALVGTSVAGIKASYAGRIYGGDIAQTVWHIEGRIPLHTLAA 180
Query: 181 HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKDS 227
+ Y + +T YG C +KV+V D S + A E + ++
Sbjct: 181 DVRYASVSTKTNYGVCNVKVWVCAND---PSAQPLEAQEAVQGQAEA 224
>gi|283050689|gb|ADB07782.1| ribosomal protein S3 [Potamophila parviflora]
Length = 166
Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 50/166 (30%), Positives = 85/166 (51%), Gaps = 17/166 (10%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60
Query: 52 -------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSV 103
+ I I++ +I++ P L+ K ++EK +K N N +++ +
Sbjct: 61 SDSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEVNSVNQRLNIGI 120
Query: 104 NEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGV 149
+V +P +++A+ IA QL+ RV FR+AMK+A++ + GV
Sbjct: 121 EKVKEPYRQPSILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGV 166
>gi|30519786|emb|CAD90760.1| ribosomal protein S3 [Orobanche minor]
Length = 166
Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats.
Identities = 53/166 (31%), Positives = 92/166 (55%), Gaps = 11/166 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQA--------GV 52
M QKINP++FRLG +S WF + +Y L ED KIR ++ ++++ G+
Sbjct: 1 MAQKINPLVFRLGTTQNHHSLWFVQAKKYSESLQEDQKIRNLIKNYVQKKVSNSSDIEGI 60
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
A I I++ ++I++ P L+I IE+++ +K + N + ++++ + KP
Sbjct: 61 APIEIKKRIDLIQVIIFMGFPKLLIESIPRGIEELQMNLQKEFHYVNRKFNIAITRITKP 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155
N +IA+ IA QL RV FR+AMK+A++ + G++V SG
Sbjct: 121 YRNPNIIAEFIANQLNNRVSFRKAMKKAIELTEQANTKGIQVQISG 166
>gi|289193197|ref|YP_003459138.1| ribosomal protein S3 [Methanocaldococcus sp. FS406-22]
gi|288939647|gb|ADC70402.1| ribosomal protein S3 [Methanocaldococcus sp. FS406-22]
Length = 207
Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats.
Identities = 67/201 (33%), Positives = 110/201 (54%), Gaps = 7/201 (3%)
Query: 32 LLHEDLK---IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR 88
+ E++K I EY + L +AG + I +T +II+Y+ +PG +IG++G+ I ++
Sbjct: 6 FVKENVKRLLIDEYFKKELSRAGYSHCDIRKTPIGTKIIIYAEKPGFVIGRRGSRIRELT 65
Query: 89 KKLSNMTNSE-IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGAD 147
+KL+ E + V V P+++A ++AQ +AQ LER + FRR AV+ M GA
Sbjct: 66 EKLAKEFGVEKPQIDVKPVENPDLDAQVVAQKVAQSLERGLHFRRVGHTAVRRVMNAGAK 125
Query: 148 GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLR 205
GV VI SG+L G E +RTE ++ G + A +D G A+A+T G G+ V +
Sbjct: 126 GVIVIISGKLTG-ERARTEKFMAGYMKHCGEPAEELVDKGRAIAKTKPGIIGVTVKIMRP 184
Query: 206 DEVSDSDSTIPAAEHRVVEKD 226
D + + I E + V ++
Sbjct: 185 DVLLPDEIIIKDTEVKHVVEE 205
>gi|284117277|ref|ZP_06386735.1| 30S ribosomal protein S3 [Candidatus Poribacteria sp. WGA-A3]
gi|283829505|gb|EFC33867.1| 30S ribosomal protein S3 [Candidatus Poribacteria sp. WGA-A3]
Length = 120
Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats.
Identities = 53/121 (43%), Positives = 88/121 (72%), Gaps = 1/121 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +P FRLG TWNSRW+A ++ LLHED++IR+ ++ L AG++++ IER+
Sbjct: 1 MGQKTHPYGFRLGYTRTWNSRWYA-KKDFVKLLHEDVEIRQTVKSRLFHAGISRVEIERS 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++I+Y+ARPG+IIG+KG +++K+R L E++++V E+ KPE++A L++++I
Sbjct: 60 GNQVKVIIYTARPGIIIGRKGAEVDKLRAMLEQRYGREVYVTVKEIKKPELDAQLVSENI 119
Query: 121 A 121
A
Sbjct: 120 A 120
>gi|110225705|ref|YP_665710.1| ribosomal protein S3 [Mesostigma viride]
gi|17222576|gb|AAL36749.1|AF353999_29 ribosomal protein S3 [Mesostigma viride]
Length = 210
Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 60/217 (27%), Positives = 95/217 (43%), Gaps = 21/217 (9%)
Query: 1 MGQKINPILFRLGVN-CTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVA---KIL 56
MGQK NP R S W+ Y LL +D IR Y++ LK + KI
Sbjct: 1 MGQKSNPQALRTAAPYQQHESCWY-HDKYYSHLLSQDFMIRSYIEKRLKGCFPSASAKIF 59
Query: 57 IERTHKNCRIIVYSARPGL--IIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINAT 114
+ + K ++ ++S + KK DI KI KK SN T+ I ++ +A
Sbjct: 60 LSSSPKELKLRIFSHGHLFLKRLKKKSYDISKILKKSSNTTSFSIQ--CYQIKNEYKSAL 117
Query: 115 LIAQSIAQQLERRVV-------FRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTEC 167
+A + Q ++R+ + F R + A G++V GR G+E +R +
Sbjct: 118 FLANLLTQAIKRKKMMSLPSLLFLRTINEA-----SDFIKGIRVSCVGRFKGSERTRKKK 172
Query: 168 YLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
+ G L T I+Y + T+YG+ G+KV+V
Sbjct: 173 FQWGSTSLHTFSEKIEYSSQSISTSYGTFGVKVWVCY 209
>gi|304368151|gb|ADM26722.1| ribosomal protein S3 [Iranian niger seed phyllody phytoplasma]
gi|304368167|gb|ADM26734.1| ribosomal protein S3 [Iranian onion phytoplasma]
gi|313493482|gb|ADR57116.1| ribosomal protein S3 [Iranian carrot phytoplasma]
Length = 129
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 47/92 (51%), Positives = 62/92 (67%)
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
+A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL TLR
Sbjct: 1 MAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLHTLR 60
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
A IDY A T YG GIKV++ + +
Sbjct: 61 ADIDYAALEAHTTYGVLGIKVWIFHGEVLPGQ 92
>gi|84490556|gb|ABC59045.1| ribosomal protein S3 [Vietnam chinaberry yellows phytoplasma]
Length = 129
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 47/92 (51%), Positives = 62/92 (67%)
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
+A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL TLR
Sbjct: 1 MAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLHTLR 60
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
A IDY A T YG GIKV++ + +
Sbjct: 61 ADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 92
>gi|261402351|ref|YP_003246575.1| ribosomal protein S3 [Methanocaldococcus vulcanius M7]
gi|261369344|gb|ACX72093.1| ribosomal protein S3 [Methanocaldococcus vulcanius M7]
Length = 206
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 64/193 (33%), Positives = 104/193 (53%), Gaps = 7/193 (3%)
Query: 32 LLHEDLK---IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR 88
+ E +K I EY + L +AG + I +T +II+Y+ +PG +IG++G+ I ++
Sbjct: 6 FVKEHIKEFLIDEYFKKELSRAGYSHCYIRKTPIGTKIIIYAEKPGFVIGRRGSRIRELT 65
Query: 89 KKLSNMTNSE-IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGAD 147
+ L+ E + V V P+++A ++AQ +AQ LER + FRR AV+ M GA
Sbjct: 66 ETLAKEFGVEKPQIDVKPVENPDLDAQVVAQKVAQSLERGMHFRRVGHTAVRRVMNAGAK 125
Query: 148 GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLR 205
GV VI SG+L G E +RTE ++ G + A +D G+A+A+T G G+ V +
Sbjct: 126 GVIVIISGKLTG-ERARTEKFMAGYMKHCGEPAEELVDKGSAIAKTKPGVIGVTVKIMRP 184
Query: 206 DEVSDSDSTIPAA 218
D + + I
Sbjct: 185 DVLLPDEIIIKDT 197
>gi|283050677|gb|ADB07773.1| ribosomal protein S3 [Leersia tisserantii]
Length = 156
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 48/156 (30%), Positives = 81/156 (51%), Gaps = 17/156 (10%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIE 60
Query: 52 -------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSV 103
+ I I++ +I++ P L+ K ++EK +K N N +++ +
Sbjct: 61 SDSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDLQKEVNSVNQRLNIGI 120
Query: 104 NEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+V +P ++A+ IA QL+ RV FR+AMK+A++
Sbjct: 121 EKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIE 156
>gi|300117006|dbj|BAJ10670.1| ribosomal protein S3 [Mulberry dwarf phytoplasma]
gi|300117009|dbj|BAJ10672.1| ribosomal protein S3 [Water dropwort witches'-broom phytoplasma]
gi|304368159|gb|ADM26728.1| ribosomal protein S3 [Iranian onion phytoplasma]
gi|307219179|dbj|BAJ19097.1| ribosomal protein S3 [Porcelain vine witches'-broom phytoplasma]
gi|313493486|gb|ADR57119.1| ribosomal protein S3 [Iranian tomato phytoplasma]
Length = 129
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 47/92 (51%), Positives = 62/92 (67%)
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
+A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL TLR
Sbjct: 1 MAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLHTLR 60
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
A IDY A T YG GIKV++ + +
Sbjct: 61 ADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 92
>gi|304368155|gb|ADM26725.1| ribosomal protein S3 [Iranian lettuce phytoplasma]
gi|304368163|gb|ADM26731.1| ribosomal protein S3 [Iranian prickly lettuce phytoplasma]
gi|313493490|gb|ADR57122.1| ribosomal protein S3 ['Gaillardia x grandiflora' phytoplasma]
gi|313493494|gb|ADR57125.1| ribosomal protein S3 ['Callistephus chinensis' phytoplasma]
Length = 129
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 47/92 (51%), Positives = 62/92 (67%)
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
+A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL TLR
Sbjct: 1 MAEQLENRMSFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLHTLR 60
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
A IDY A T YG GIKV++ + +
Sbjct: 61 ADIDYAAVEAHTTYGVLGIKVWIFHGEVLPGQ 92
>gi|295154268|gb|ADF83043.1| ribosomal protein S3 [Ctenium cirrhosum]
Length = 193
Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 101/193 (52%), Gaps = 17/193 (8%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
II++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHIIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+RA
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIRA 180
Query: 181 HIDYGTAVAETAY 193
I Y T Y
Sbjct: 181 KIYYCCYPIRTIY 193
>gi|283050697|gb|ADB07788.1| ribosomal protein S3 [Chikusichloa mutica]
Length = 181
Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 32/181 (17%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60
Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88
+ I I++ +I++ P L+ K ++EK
Sbjct: 61 SDSSSDVITHNRKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG 148
+K N N +++ + +V +P ++A+ IA QL+ RV FR+AMK+A++ + G
Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKG 180
Query: 149 V 149
V
Sbjct: 181 V 181
>gi|84490559|gb|ABC59047.1| ribosomal protein S3 [Helianthus debilis little leaf phytoplasma]
gi|84490562|gb|ABC59049.1| ribosomal protein S3 [Dogfennel yellows phytoplasma]
gi|84490568|gb|ABC59053.1| ribosomal protein S3 [Ragweed yellows phytoplasma]
Length = 129
Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 47/92 (51%), Positives = 62/92 (67%)
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
+A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL TLR
Sbjct: 1 MAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLHTLR 60
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
A IDY A T YG GIKV++ + +
Sbjct: 61 ADIDYAALEAHTTYGVLGIKVWIFHGEVLPGQ 92
>gi|283050649|gb|ADB07752.1| ribosomal protein S3 [Oryza brachyantha]
Length = 181
Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 32/181 (17%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60
Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88
+ I I++ +I++ P L+ K ++EK
Sbjct: 61 SDSSFEVITHNKKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG 148
+K N N +++ + +V +P ++A+ IA QL+ RV FR+AMK+A++ + G
Sbjct: 121 QKEVNSVNQRVNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKTDIKG 180
Query: 149 V 149
V
Sbjct: 181 V 181
>gi|15668638|ref|NP_247436.1| 30S ribosomal protein S3P [Methanocaldococcus jannaschii DSM 2661]
gi|1710763|sp|P54034|RS3_METJA RecName: Full=30S ribosomal protein S3P
gi|1591163|gb|AAB98450.1| SSU ribosomal protein S3P (rpsC) [Methanocaldococcus jannaschii DSM
2661]
Length = 208
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 64/195 (32%), Positives = 104/195 (53%), Gaps = 7/195 (3%)
Query: 32 LLHEDLK---IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR 88
+ E++K I EY + L +AG + I +T +II+Y+ +PG +IG++G+ I ++
Sbjct: 6 FVKENVKRLLIDEYFKKELSKAGYSHCDIRKTPIGTKIIIYAEKPGFVIGRRGSRIRELT 65
Query: 89 KKLSNMTNSE-IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGAD 147
+ L+ E + V V P+++A ++AQ +AQ LER + FRR AV+ M GA
Sbjct: 66 ETLAKEFGVEKPQIDVKPVENPDLDAQVVAQKVAQSLERGLHFRRVGHTAVRRVMNAGAK 125
Query: 148 GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLR 205
GV VI SG+L G E +RTE ++ G + A +D G A+A+T G G+ V +
Sbjct: 126 GVIVIISGKLTG-ERARTEKFMAGYMKHCGEPAEELVDKGRAIAKTKPGVIGVTVKIMRP 184
Query: 206 DEVSDSDSTIPAAEH 220
D + + I
Sbjct: 185 DVLLPDEIIIKEDAE 199
>gi|84490565|gb|ABC59051.1| ribosomal protein S3 [Florida periwinkle virescence phytoplasma]
Length = 129
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 47/92 (51%), Positives = 62/92 (67%)
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
+A+QLE R+ FRR K A+Q A++ GA GVK + SGRL GAE++R+E + EGRVPL TLR
Sbjct: 1 MAEQLENRMFFRRVQKMAIQKALKAGAKGVKTLISGRLGGAEIARSEGHAEGRVPLHTLR 60
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
A IDY A T YG GIKV++ + +
Sbjct: 61 ADIDYAALEAHTTYGVLGIKVWIFHGEVLPGR 92
>gi|38638299|ref|NP_943674.1| ribosomal protein S3 [Chara vulgaris]
gi|32966613|gb|AAP92196.1| ribosomal protein S3 [Chara vulgaris]
Length = 270
Score = 128 bits (322), Expect = 6e-28, Method: Composition-based stats.
Identities = 63/270 (23%), Positives = 98/270 (36%), Gaps = 67/270 (24%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG-------VA 53
M QK+NPI RL VN + +S WF+ YG LL++DL IREY G
Sbjct: 1 MAQKVNPISVRLNVNRSPDSCWFSDYY-YGELLYQDLNIREYFGSIRPPMGAQVFGFRPG 59
Query: 54 KILIERTHKNCRIIVYSARPGLIIGK---KGTDIEKIRKKLSNMTNSEIHLSVNEVPK-- 108
+ +I K I ++ L K K ++ K + + + +
Sbjct: 60 RCVIHHFPKRTLIHLFFLSRTLQKSKTNPKNRSFDQSSKLIKHAIDYFVMQYFFYAKNRL 119
Query: 109 ----------------------PEINATL---------------------------IAQS 119
P A
Sbjct: 120 KFDPASALIGFVCQKESYVRFAPGRYFYFAFLQSLLSSRAKTHTVIRPLKVASVYQSASL 179
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRF-----GADGVKVIASGRLNGAELSRTECYLEGRVP 174
IAQ++ ++ + + ++ +S + G+++ SGR NGAE+++TEC G+
Sbjct: 180 IAQEICNKLEQKTSFRQICRSIFQQIEKCNYVKGIRISCSGRNNGAEIAKTECRKYGQTS 239
Query: 175 LQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
L IDY A A T YG G+KV+VS
Sbjct: 240 LHVFSDKIDYAQAQASTPYGILGVKVWVSY 269
>gi|296109315|ref|YP_003616264.1| ribosomal protein S3 [Methanocaldococcus infernus ME]
gi|295434129|gb|ADG13300.1| ribosomal protein S3 [Methanocaldococcus infernus ME]
Length = 211
Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats.
Identities = 60/194 (30%), Positives = 104/194 (53%), Gaps = 7/194 (3%)
Query: 32 LLHEDLK---IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR 88
+ E++K I E+ + L +AG + I++T ++ +Y+ RPG +IG++G+ I+++
Sbjct: 6 FIKENVKKVLIDEFFKKELFKAGYSHCEIKKTPIGTKVTIYAERPGFVIGRRGSRIKELT 65
Query: 89 KKLSNMTN-SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGAD 147
+ L+ + V V P+++A ++A+ IA+ LER + FRR AV+ M GA
Sbjct: 66 EILAKEFKLDRPQIDVKPVENPDLDAQVVAEKIARALERGMHFRRVGHTAVRRVMNAGAK 125
Query: 148 GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLR 205
GV VI SG+L G E +RTE ++ G + A +D G A+A T G G+ V +
Sbjct: 126 GVVVIISGKLTG-ERARTEKFMAGYMKHCGEPAEDLVDKGRAIALTKPGVIGVTVKIMRP 184
Query: 206 DEVSDSDSTIPAAE 219
D + + I +
Sbjct: 185 DVLLPDEIVIKEKD 198
>gi|283050605|gb|ADB07719.1| ribosomal protein S3 [Oryza rufipogon]
gi|283050609|gb|ADB07722.1| ribosomal protein S3 [Oryza glaberrima]
gi|283050613|gb|ADB07725.1| ribosomal protein S3 [Oryza meridionalis]
gi|283050621|gb|ADB07731.1| ribosomal protein S3 [Oryza malampuzhaensis]
gi|283050629|gb|ADB07737.1| ribosomal protein S3 [Oryza punctata]
gi|283050633|gb|ADB07740.1| ribosomal protein S3 [Oryza rhizomatis]
gi|283050637|gb|ADB07743.1| ribosomal protein S3 [Oryza latifolia]
Length = 181
Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 32/181 (17%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60
Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88
+ I I++ +I++ P L+ K ++EK
Sbjct: 61 ADSSFEVITHNKKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG 148
+K N N +++ + +V +P ++A+ IA QL+ RV FR+AMK+A++ + G
Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKTDIKG 180
Query: 149 V 149
V
Sbjct: 181 V 181
>gi|256810641|ref|YP_003128010.1| ribosomal protein S3 [Methanocaldococcus fervens AG86]
gi|256793841|gb|ACV24510.1| ribosomal protein S3 [Methanocaldococcus fervens AG86]
Length = 207
Score = 128 bits (321), Expect = 8e-28, Method: Composition-based stats.
Identities = 63/184 (34%), Positives = 99/184 (53%), Gaps = 4/184 (2%)
Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN 96
L I EY + L +AG + I +T +I +Y+ +PG +IG++G+ I ++ K L+
Sbjct: 14 LLIDEYFKKELSRAGYSHCDIRKTPIGTKITIYAEKPGFVIGRRGSRIRELTKTLAEEFG 73
Query: 97 SE-IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155
E + V V P+++A ++AQ +AQ LER + FRR AV+ M GA GV VI SG
Sbjct: 74 VEKPQIDVKPVENPDLDAQVVAQKVAQSLERGLHFRRVGHTAVRRVMNAGAKGVIVIISG 133
Query: 156 RLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
+L G E +RTE ++ G + A +D G A+A+T G G+ V + D + +
Sbjct: 134 KLTG-ERARTEKFMAGYMKHCGEPAEELVDKGRAIAKTKPGVIGVTVKIMRPDVLLPDEI 192
Query: 214 TIPA 217
I
Sbjct: 193 IIKD 196
>gi|283050661|gb|ADB07761.1| ribosomal protein S3 [Oryza neocaledonica]
Length = 180
Score = 127 bits (320), Expect = 9e-28, Method: Composition-based stats.
Identities = 47/180 (26%), Positives = 82/180 (45%), Gaps = 32/180 (17%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60
Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88
+ I I++ +I++ P L+ K ++EK
Sbjct: 61 SDSSFEVITHNNEMDSGSSSEVITHIEIQKEIDPIHVIIHIGFPNLLKKKGPIEELEKDL 120
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG 148
+K N N +++ + +V +P ++A+ I QL+ R+ FR+AMK+A++ + G
Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYKQPNILAEYITFQLKNRISFRKAMKKALELTKKTDIKG 180
>gi|283050681|gb|ADB07776.1| ribosomal protein S3 [Maltebrunia letestui]
Length = 181
Score = 127 bits (320), Expect = 1e-27, Method: Composition-based stats.
Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 32/181 (17%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++K+
Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIKKNRKKSSNRKIE 60
Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88
+ I I++ +I++ P L+ K ++EK
Sbjct: 61 SDSSSEVITHNRKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG 148
+K N N +++ + +V +P ++A+ IA QL+ RV FR+AMK+A++ + G
Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKG 180
Query: 149 V 149
V
Sbjct: 181 V 181
>gi|283050701|gb|ADB07791.1| ribosomal protein S3 [Zizania aquatica]
Length = 181
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 32/181 (17%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNKKIE 60
Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88
+ I I++ +I++ P L+ K ++EK
Sbjct: 61 SDSNSEVITHNRKMDSGSSSEVITHIEIKKEIDTIHVIIHIGFPNLLKRKGAIEELEKDL 120
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG 148
+K N N +++ + +V +P ++A+ IA QL+ RV FR+AMK+A++ + G
Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKG 180
Query: 149 V 149
V
Sbjct: 181 V 181
>gi|283050729|gb|ADB07812.1| ribosomal protein S3 [Ehrharta erecta]
Length = 177
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 32/177 (18%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60
Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKGT-DIEKIR 88
+ I I++ +I++ P L+ K ++EK
Sbjct: 61 SDSSSEVITHNRKTDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIGELEKDL 120
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG 145
+K N N +++ + +V +P ++A+ IA QL+ RV FR+AMK+A++ +
Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKAD 177
>gi|283050733|gb|ADB07815.1| ribosomal protein S3 [Phyllostachys aurea]
Length = 177
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 48/177 (27%), Positives = 84/177 (47%), Gaps = 32/177 (18%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60
Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88
+ +I I++ +I++ P L+ K ++EK
Sbjct: 61 SDSSSEVITHNRKMDSGSSSEVITRIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG 145
+K N N +++++ +V +P ++A+ IA QL+ RV FR+AMK+A++ +
Sbjct: 121 QKEVNSVNQRLNIAIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKAD 177
>gi|283050721|gb|ADB07806.1| ribosomal protein S3 [Zizaniopsis villanensis]
Length = 177
Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 48/177 (27%), Positives = 83/177 (46%), Gaps = 32/177 (18%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60
Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88
+ +I I++ +I++ P L+ K ++EK
Sbjct: 61 SDSSSEVITHNRKMDSGSSSEVITQIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG 145
+K N N +++ + +V +P ++A+ IA QL+ RV FR+AMK+A++ +
Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKAD 177
>gi|283050693|gb|ADB07785.1| ribosomal protein S3 [Chikusichloa aquatica]
Length = 176
Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 48/175 (27%), Positives = 82/175 (46%), Gaps = 32/175 (18%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60
Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88
+ I I++ +I++ P L+ K ++EK
Sbjct: 61 SDSSSDVITHNRKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMR 143
+K N N +++ + +V +P ++A+ IA QL+ RV FR+AMK+A++ +
Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKK 175
>gi|283050645|gb|ADB07749.1| ribosomal protein S3 [Oryza coarctata]
Length = 177
Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 32/177 (18%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60
Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88
+ I I++ +I++ P L+ K ++EK
Sbjct: 61 SDSSFEVITHNKKMDSGPSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG 145
+K N N +++ + +V +P ++A+ IA QL+ RV FR+AMK+A++ +
Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKTD 177
>gi|215444831|ref|ZP_03431583.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis T85]
gi|289756795|ref|ZP_06516173.1| ribosomal protein S3 [Mycobacterium tuberculosis T85]
gi|289712359|gb|EFD76371.1| ribosomal protein S3 [Mycobacterium tuberculosis T85]
Length = 152
Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 47/90 (52%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Query: 126 RRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDY 184
RV FRRAM++A+QSAM + G++V SGRL GAE+SR+E Y EGRVPL TLRA IDY
Sbjct: 3 NRVAFRRAMRKAIQSAMRQPNVKGIRVQCSGRLGGAEMSRSEFYREGRVPLHTLRADIDY 62
Query: 185 GTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
G A+T +G G+KV++ D V
Sbjct: 63 GLYEAKTTFGRIGVKVWIYKGDIVGGKREL 92
>gi|283050705|gb|ADB07794.1| ribosomal protein S3 [Zizania latifolia]
Length = 177
Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 32/177 (18%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNKKIE 60
Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88
+ I I++ +I++ P L+ K ++EK
Sbjct: 61 SDSSSEVITHNRKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKRKGAIEELEKDL 120
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG 145
+K N N +++ + +V +P ++A+ IA QL+ RV FR+AMK+A++ +
Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKAD 177
>gi|283050657|gb|ADB07758.1| ribosomal protein S3 [Oryza granulata]
Length = 177
Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 32/177 (18%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60
Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88
+ I I++ +I++ P L+ K ++EK
Sbjct: 61 SDSSFEVITHNKEMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG 145
+K N N +++ + +V +P ++A+ IA QL+ RV FR+AMK+A++ +
Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYKQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKTD 177
>gi|283050725|gb|ADB07809.1| ribosomal protein S3 [Hygroryza aristata]
Length = 177
Score = 125 bits (315), Expect = 4e-27, Method: Composition-based stats.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 32/177 (18%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60
Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88
+ I I++ +I++ P L+ K ++EK
Sbjct: 61 SDSNSEVITHNRKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG 145
+K N N +++ + +V +P ++A+ IA QL+ RV FR+AMK+A++ +
Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKAD 177
>gi|283050617|gb|ADB07728.1| ribosomal protein S3 [Oryza punctata]
Length = 177
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 32/177 (18%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60
Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88
+ I I++ +I++ P L+ K ++EK
Sbjct: 61 ADSSFEVITHNKKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG 145
+K N N +++ + +V +P ++A+ IA QL+ RV FR+AMK+A++ +
Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKTD 177
>gi|283050709|gb|ADB07797.1| ribosomal protein S3 [Rhynchoryza subulata]
Length = 177
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 32/177 (18%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNKKIE 60
Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88
+ I I++ +I++ P L+ K ++EK
Sbjct: 61 SDSSSEVITHNRKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG 145
+K N N +++ + +V +P ++A+ IA QL+ RV FR+AMK+A++ +
Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKAD 177
>gi|283050641|gb|ADB07746.1| ribosomal protein S3 [Oryza australiensis]
Length = 177
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 32/177 (18%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60
Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88
+ I I++ +I++ P L+ K ++EK
Sbjct: 61 SDSSFEVITHNKKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG 145
+K N N +++ + +V +P ++A+ IA QL+ RV FR+AMK+A++ +
Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKTD 177
>gi|283050625|gb|ADB07734.1| ribosomal protein S3 [Oryza officinalis]
Length = 178
Score = 125 bits (314), Expect = 5e-27, Method: Composition-based stats.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 32/177 (18%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60
Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88
+ I I++ +I++ P L+ K ++EK
Sbjct: 61 ADSSFEVITHNKKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG 145
+K N N +++ + +V +P ++A+ IA QL+ RV FR+AMK+A++ +
Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKTD 177
>gi|289597187|ref|YP_003483883.1| ribosomal protein S3 [Aciduliprofundum boonei T469]
gi|289534974|gb|ADD09321.1| ribosomal protein S3 [Aciduliprofundum boonei T469]
Length = 237
Score = 125 bits (313), Expect = 7e-27, Method: Composition-based stats.
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 10/203 (4%)
Query: 31 ALLHED---LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKI 87
+ E+ L ++EYL AG + I+RT RII+ RPG++IG+KG I+++
Sbjct: 5 KFVKENVNRLLMKEYLMKETAMAGFGGLEIQRTPLGTRIILEVERPGMVIGRKGAKIKEL 64
Query: 88 RKKLSNMTNS-EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGA 146
KL + V E P P +NA ++AQ +A LER FRRA ++ M GA
Sbjct: 65 TDKLQQDFGVENPTIEVKESPNPYLNAQIMAQKLAMALERGWHFRRAGHSTLRRIMEAGA 124
Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH-IDYGTAVAETAYGSCGIKVYVSLR 205
G ++I SG+L G + +RTE +++G + + G A A+T G G+ V +
Sbjct: 125 KGAQIIISGKLTG-DRARTEKFMDGTIKYNGKPVELVRMGYATAKTKPGIIGVTVKIMPP 183
Query: 206 DEVSDSD----STIPAAEHRVVE 224
D + + A E +V E
Sbjct: 184 DAKLPDEVNILPPVEAEEEKVNE 206
>gi|215444830|ref|ZP_03431582.1| 30S ribosomal protein S3 [Mycobacterium tuberculosis T85]
Length = 113
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 46/114 (40%), Positives = 71/114 (62%), Gaps = 1/114 (0%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINP FRLG+ W SRW+A +Y + ED+ IR L L++AG+A + IERT
Sbjct: 1 MGQKINPHGFRLGITTDWKSRWYAD-KQYAEYVKEDVAIRRLLSSGLERAGIADVEIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINAT 114
R+ +++ARPG++IG++GT+ ++IR L +T ++ L++ EV
Sbjct: 60 RDRVRVDIHTARPGIVIGRRGTEADRIRADLEKLTGKQVQLNILEVKTRSRKRN 113
>gi|194033317|ref|YP_002000403.1| ribosomal protein S3 [Oedogonium cardiacum]
gi|156619062|gb|ABU88209.1| ribosomal protein S3 [Oedogonium cardiacum]
gi|186968934|gb|ACC97257.1| ribosomal protein S3 [Oedogonium cardiacum]
Length = 596
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 61/191 (31%), Positives = 93/191 (48%), Gaps = 15/191 (7%)
Query: 26 GSEYGALLHEDLK----------IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGL 75
Y EDLK +++ ++ ++ + +L KN +
Sbjct: 406 KKNYHKKQIEDLKKNEVKKENIKLKKVVKRKIQNFMIDNLLKNNVSKNSE----CYKLSS 461
Query: 76 IIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMK 135
I K + + L N + + EV +P A +A I Q+LE+R FR MK
Sbjct: 462 IYQAKVFEDLIKQLALRNSFPKISAIEIIEVKQPSEYAVCLAYFITQKLEKRFSFRSIMK 521
Query: 136 RAVQSAMRFGA-DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
+A + A++ + G+K+ SGRLNGAE++RTE EGRVPLQTL A +DY A+T YG
Sbjct: 522 QAKRVAIQTSSVKGIKIQLSGRLNGAEIARTEWIREGRVPLQTLEADVDYSYKTAQTLYG 581
Query: 195 SCGIKVYVSLR 205
G+KV+V +
Sbjct: 582 IIGVKVWVFRK 592
Score = 72.0 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 32/56 (57%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQKI+P+ FR+G+ ++WFA +Y + ED+ +R+ L + + ++
Sbjct: 1 MGQKIHPLGFRVGITKKHKAKWFANSDQYPQYILEDILLRKRLTSLIAPESLPRVF 56
>gi|294496011|ref|YP_003542504.1| 30S ribosomal protein S3P [Methanohalophilus mahii DSM 5219]
gi|292667010|gb|ADE36859.1| SSU ribosomal protein S3P [Methanohalophilus mahii DSM 5219]
Length = 314
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 8/202 (3%)
Query: 31 ALLHEDLKIR----EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK 86
ED ++ EY L +AG + I RT +I+VYS +PG++IGK G I K
Sbjct: 5 KKFVEDGFVKASLDEYFANQLSRAGYGGMEINRTPMGTQIVVYSEKPGMVIGKAGKVIRK 64
Query: 87 IRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG 145
+ + + + N + EV +PE+NA ++A +A +ER FR+A A+++ M G
Sbjct: 65 LTRDVGRLYNLDNPQIDAQEVKRPELNAQMMATRLASSIERGWYFRKAGHNAMRAIMNSG 124
Query: 146 ADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVS 203
A G ++I SG++ GA SR E + G + +D G AVA G+ G KV +
Sbjct: 125 ALGCEIILSGKVTGA-RSRVEKMVNGYIKHAGKPVDDIVDEGFAVAVKKLGTIGCKVRII 183
Query: 204 LRDEVSDSDSTIPAAEHRVVEK 225
V + V +
Sbjct: 184 HPGAVLPDSYHLKEIVEEAVAE 205
>gi|295154022|gb|ADF82920.1| ribosomal protein S3 [Willkommia annua]
Length = 179
Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 55/179 (30%), Positives = 96/179 (53%), Gaps = 17/179 (9%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKDYIQKNRKKSSNRKIESGSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PLQT+R
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKKGRLPLQTIR 179
>gi|147919328|ref|YP_686936.1| 30S ribosomal protein S3P [uncultured methanogenic archaeon RC-I]
gi|121687826|sp|Q0W1Y3|RS3_UNCMA RecName: Full=30S ribosomal protein S3P
gi|110622332|emb|CAJ37610.1| 30S ribosomal protein S3P [uncultured methanogenic archaeon RC-I]
Length = 279
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 61/193 (31%), Positives = 95/193 (49%), Gaps = 7/193 (3%)
Query: 30 GALLHEDLK---IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK 86
+ E K + EY L++AG + I RT +I + + +PG+IIGK G I +
Sbjct: 5 KKFVQEGFKKAMVDEYFLEKLERAGYGGMEINRTPMGTQITLKAEKPGMIIGKAGKSIRR 64
Query: 87 IRKKLSNMTNS-EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG 145
K++ + V EV KPE+NA ++A +A LER FR+A + +Q M G
Sbjct: 65 YTKEMDMRFKMDNPQIDVQEVKKPELNAQMMATRLANALERGWYFRKAGQSTLQRIMDSG 124
Query: 146 ADGVKVIASGRLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVS 203
A G +VI +G+L GA R E ++ G + + + +D G A A+ G G+KV +
Sbjct: 125 AMGCEVIIAGKLTGA-RKRREKFIAGYIKHCGKPVEELVDVGYARAKKKLGIIGVKVRIM 183
Query: 204 LRDEVSDSDSTIP 216
+ V TI
Sbjct: 184 PPEAVLPDQITIE 196
>gi|301500964|ref|YP_003795429.1| ribosomal protein S3 [Alveolata sp. CCMP3155]
gi|300069510|gb|ADJ66617.1| ribosomal protein S3 [Chromerida sp. RM11]
Length = 247
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 56/248 (22%), Positives = 96/248 (38%), Gaps = 46/248 (18%)
Query: 1 MGQKINPILFRLG-VNCTWNSRWFAR-------GSEYGALLHEDLKIREYLQCHLKQAGV 52
MGQKINP+ R VN + W+A S+Y LH D +R+ +Q +
Sbjct: 1 MGQKINPVGLRAKLVNRS--GGWYAPLSSKFKLSSDYANKLHTDFALRQAVQSLATSLDL 58
Query: 53 AKILIERT-HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN--------------- 96
++ + T + ++ P + + + +++
Sbjct: 59 VQVKVFLTQSNRLILTLFLPYPDYLYMNLSPRVHPTITQTFKISHASNLKESLKTLLDWP 118
Query: 97 ---------------SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSA 141
+ + + V +A +I L++RV RRA+K Q+A
Sbjct: 119 RNLQVRLRARKIFLSQPVSVQIKLVKASYHRPDFLATAIQASLQKRVAIRRAVKLWAQTA 178
Query: 142 MRFGADGVKVI-----ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196
+ +V SGRLN AE++ +E G+V L T+ A +DY T+ G
Sbjct: 179 LNQKVGSFRVQGVRVRLSGRLNNAEMASSEQLSFGKVSLHTISAPVDYCCRHYRTSSGVL 238
Query: 197 GIKVYVSL 204
GIKV+V+
Sbjct: 239 GIKVWVAR 246
>gi|223927431|gb|ACN23343.1| ribosomal protein S3 [Halimeda gracilis]
Length = 158
Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats.
Identities = 52/161 (32%), Positives = 89/161 (55%), Gaps = 6/161 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R LQ +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYVLEDNFLRTILQKKYSRAGFEKIQISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
+ I++++ +P ++IGKKG ++E +K++ + + ++ L V + + +A+ IA
Sbjct: 61 IENHIEIVIHAQKPDILIGKKGENLELFQKEIKQLLSKKVILY---VLRSKTSASSIADF 117
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGA 160
I Q LE+RV ++ + G+K+ SGRLNG+
Sbjct: 118 IVQNLEKRVPYKLIF--VLLKKHFKIDFGMKIQISGRLNGS 156
>gi|298674796|ref|YP_003726546.1| 30S ribosomal protein S3 [Methanohalobium evestigatum Z-7303]
gi|298287784|gb|ADI73750.1| ribosomal protein S3 [Methanohalobium evestigatum Z-7303]
Length = 307
Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats.
Identities = 55/174 (31%), Positives = 86/174 (49%), Gaps = 4/174 (2%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS-EI 99
EY L +AG + I RT +I +Y+ +PG++IGK G I K+ + + + N
Sbjct: 19 EYFAKQLNRAGYGGMEINRTPMGTQITIYAEKPGMVIGKGGKVIRKLTRDVDKLYNMDNP 78
Query: 100 HLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNG 159
+ EV PE+NA ++A +A +ER FR+A A+++ M GA G ++I SG+L G
Sbjct: 79 QIDAQEVKTPELNAQMMATRLAASIERGWYFRKAGHNAIRAIMGAGALGCEIIMSGKLTG 138
Query: 160 AELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
+R E + G + +D G A A G+ G KV + D V
Sbjct: 139 P-RARVEKLVRGYIKHAGKPVDDIVDEGFATAVKKLGTIGCKVRIIHPDAVLPD 191
>gi|38426850|gb|AAR20471.1| ribosomal protein S3 [Candidatus Phytoplasma australiense]
Length = 140
Score = 121 bits (304), Expect = 6e-26, Method: Composition-based stats.
Identities = 54/140 (38%), Positives = 83/140 (59%), Gaps = 4/140 (2%)
Query: 5 INPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER----T 60
NP RLG+ TW+S+W E AL+ ED IR+ + K+ +++I I+R T
Sbjct: 1 TNPNGLRLGIIRTWDSQWCVNDKEIPALIKEDFLIRQLINNFSKRNSISQIEIQRLKEKT 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +++A+PG+IIGK G KI+ L +T +I+L++ EV P+ A L+AQ++
Sbjct: 61 KNRITITIHTAKPGIIIGKDGETRNKIQAPLKKLTQKDINLNILEVKNPDKTAVLVAQNM 120
Query: 121 AQQLERRVVFRRAMKRAVQS 140
A+QLE R+ FRR K A+Q
Sbjct: 121 AEQLENRMKFRRVQKMAIQK 140
>gi|73667656|ref|YP_303671.1| 30S ribosomal protein S3P [Methanosarcina barkeri str. Fusaro]
gi|91207819|sp|Q46GA1|RS3_METBF RecName: Full=30S ribosomal protein S3P
gi|72394818|gb|AAZ69091.1| SSU ribosomal protein S3P [Methanosarcina barkeri str. Fusaro]
Length = 311
Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats.
Identities = 61/197 (30%), Positives = 99/197 (50%), Gaps = 11/197 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEI 99
EY L +AG + + RT +I++YS +PG++IGK G I K+ + ++ N
Sbjct: 19 EYFAEQLNRAGYGGMELNRTPMGTQIVIYSEKPGMVIGKAGKVIRKLTRDVAARYNLENP 78
Query: 100 HLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNG 159
+ EV KPE+NA ++A +A +ER FR+A +++ M GA G +V+ SG+L G
Sbjct: 79 QIDAQEVKKPELNAQMMASRLAASIERGWYFRKAGHNTLRAVMNAGALGCEVVISGKLTG 138
Query: 160 AELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS-----D 212
A SR E +++G + + +D G AVA G+ G KV + V +
Sbjct: 139 A-RSRVEKFVDGYIKHSGNPVDEVVDEGFAVAIKKLGTLGCKVRIIQPGVVLPDSYTTTE 197
Query: 213 STIPAAE--HRVVEKDS 227
+ P E + EK +
Sbjct: 198 PSEPVTEPVEKPAEKPA 214
>gi|38426852|gb|AAR20472.1| ribosomal protein S3 [Candidatus Phytoplasma australiense]
Length = 142
Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 54/140 (38%), Positives = 84/140 (60%), Gaps = 4/140 (2%)
Query: 7 PILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER----THK 62
P RLG+ TW+S+W E AL+ ED IR+ + K+ +++I I+R T
Sbjct: 3 PNGLRLGIIRTWDSQWCVNDKEIPALIKEDFLIRQLINNFSKRNSISQIEIQRLKEKTKN 62
Query: 63 NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQ 122
I +++A+PG+IIGK G KI+ +L +T +I+L++ EV P+ A L+AQ++A+
Sbjct: 63 RITITIHTAKPGIIIGKDGETRNKIQAQLKKLTQKDINLNILEVKNPDKTAVLVAQNMAE 122
Query: 123 QLERRVVFRRAMKRAVQSAM 142
QLE R+ FRR K A+Q A
Sbjct: 123 QLENRMKFRRVQKMAIQKAF 142
>gi|11499503|ref|NP_070744.1| 30S ribosomal protein S3P [Archaeoglobus fulgidus DSM 4304]
gi|6094176|sp|O28360|RS3_ARCFU RecName: Full=30S ribosomal protein S3P
gi|2648625|gb|AAB89335.1| SSU ribosomal protein S3P (rps3P) [Archaeoglobus fulgidus DSM 4304]
Length = 229
Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 60/203 (29%), Positives = 102/203 (50%), Gaps = 8/203 (3%)
Query: 31 ALLHEDLK---IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKI 87
+ E LK ++E+++ ++ AG + I RT ++ ++ RPGL+IGK G I+ +
Sbjct: 6 KFVQERLKKLMVKEWIKDEVRSAGFGGVDILRTPLGTQVTLFVERPGLVIGKGGRRIKAL 65
Query: 88 RKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGAD 147
+KL + +SV+EV KPE NA L+A +A+ LER FRRA R + M GA
Sbjct: 66 TEKLKDFGIENPQVSVDEVEKPEFNAQLMASLLARALERGWYFRRAGYRFLYRIMEAGAK 125
Query: 148 GVKVIASGRLNGAELSRTECYLEGRVPLQTLR---AHIDYGTAVAETAYGSCGIKVYVSL 204
G ++ SG+L +E +RTE ++ G + + T + + G +A G G+ V +
Sbjct: 126 GCEIEISGKLV-SERARTEKFVAGTI-VHTGDPAESMVQKGFDIAIKKLGVLGVSVRIIP 183
Query: 205 RDEVSDSDSTIPAAEHRVVEKDS 227
D + + + +S
Sbjct: 184 PDVTLPDEFEVKDVNIEHLRGES 206
>gi|167043045|gb|ABZ07757.1| putative ribosomal protein S3, C-terminal domain protein
[uncultured marine microorganism HF4000_ANIW141A21]
Length = 214
Score = 120 bits (301), Expect = 1e-25, Method: Composition-based stats.
Identities = 63/194 (32%), Positives = 98/194 (50%), Gaps = 4/194 (2%)
Query: 36 DLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95
D I EYL+ +++ AG I + RI +Y +PGL+IG++G I ++ + L +
Sbjct: 8 DSGIDEYLEKNIESAGYGGFEIITSPVGTRITIYVTKPGLVIGRRGIGIRELTENLEKIF 67
Query: 96 N-SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIAS 154
+ +SV EV PE NA ++ +AQ + R FRRA V + MR GA G ++I +
Sbjct: 68 ELQNLQISVFEVEIPEQNARIMCNRVAQTVARGTAFRRAAMWTVNAIMRSGALGAEIIIA 127
Query: 155 GRLNGAELSRTECYLEGRVPLQTLRA--HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
G+L +E S TE Y +G VP A + + + G GI+V +++RD V
Sbjct: 128 GKLR-SERSHTEKYKDGVVPKTGYPATLTVREAVSDVKLKMGLYGIQVKIAIRDMVPPDM 186
Query: 213 STIPAAEHRVVEKD 226
I E EK+
Sbjct: 187 ELIKDIEKERSEKE 200
>gi|298489091|ref|ZP_07007113.1| SSU ribosomal protein S3p (S3e) [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298156403|gb|EFH97501.1| SSU ribosomal protein S3p (S3e) [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 135
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 44/89 (49%), Positives = 58/89 (65%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI RLG+ S W+A G Y L DLK+REYLQ LK A V++I I R
Sbjct: 29 MGQKVHPIGIRLGIVKEHTSVWYADGRTYADYLFADLKVREYLQDKLKSASVSRIDIHRP 88
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRK 89
+ RI +++ARPG++IGKKG D+EK
Sbjct: 89 AQTARITIHTARPGIVIGKKGEDVEKTAS 117
>gi|193084311|gb|ACF09970.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
KM3-130-D10]
Length = 367
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 4/184 (2%)
Query: 35 EDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM 94
E +REYL ++AG + RT + ++ + + + G +IG++G I +++++L N
Sbjct: 16 ERQLVREYLLRETERAGFGGLSFNRTPEGTKVTLQAEQVGRVIGRRGKVIHELQRRLQND 75
Query: 95 TN-SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIA 153
HL V EV + ++A ++A +A LER FRRA Q+ M GA G VI
Sbjct: 76 FILENPHLDVEEVAESRLSAQIMASRLASSLERGWFFRRAGHSTAQNIMDAGARGCLVIL 135
Query: 154 SGRLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
SG++ G R E + +G + +T +D G + A G+ G V +
Sbjct: 136 SGKITGP-RHRVEKFQQGHIKFCGETALEFMDTGFSTAVKKLGTIGCTVRIMRPGVKLPH 194
Query: 212 DSTI 215
+ TI
Sbjct: 195 EITI 198
>gi|21228232|ref|NP_634154.1| 30S ribosomal protein S3P [Methanosarcina mazei Go1]
gi|27734502|sp|Q8PV44|RS3_METMA RecName: Full=30S ribosomal protein S3P
gi|20906688|gb|AAM31826.1| SSU ribosomal protein S3P [Methanosarcina mazei Go1]
Length = 307
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 61/200 (30%), Positives = 97/200 (48%), Gaps = 14/200 (7%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEI 99
EY L +AG + + RT +II+YS +PG++IGK G I K+ + ++ N
Sbjct: 19 EYFAEQLNRAGYGGMELNRTPMGTQIIIYSEKPGMVIGKAGKVIRKLTRDVATKYNLENP 78
Query: 100 HLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNG 159
+ EV KPE+NA ++A +A +ER FR+A +++ M GA G +V+ SG+L G
Sbjct: 79 QIDAQEVKKPELNAQMMASRLAASIERGWYFRKAGHNTIRAVMNAGALGCEVVISGKLTG 138
Query: 160 AELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS------ 211
A SR E +++G + + +D G AVA G+ G KV + V
Sbjct: 139 A-RSRVEKFVDGYIKHSGHPVEEVVDEGFAVAIKKLGTLGCKVRIIQPGVVLPDSYKVRE 197
Query: 212 ----DSTIPAAEHRVVEKDS 227
+ + VEK +
Sbjct: 198 SVEIEEPAEKPAEKQVEKPA 217
>gi|91772089|ref|YP_564781.1| 30S ribosomal protein S3P [Methanococcoides burtonii DSM 6242]
gi|121687004|sp|Q12ZU5|RS3_METBU RecName: Full=30S ribosomal protein S3P
gi|91711104|gb|ABE51031.1| SSU ribosomal protein S3P [Methanococcoides burtonii DSM 6242]
Length = 304
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 56/183 (30%), Positives = 90/183 (49%), Gaps = 4/183 (2%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEI 99
EY L +AG + I RT +I VY+ +PG++IGK G I K+ + + + +
Sbjct: 19 EYFAKQLSRAGYGGMDINRTPMGTQITVYAEKPGMVIGKAGKVIRKLTRDVDRLYDLDNP 78
Query: 100 HLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNG 159
+ EV +PE+NA ++A +A +ER FR+A +++ M GA G +++ SG+L G
Sbjct: 79 QIDAQEVKRPELNAQMMASRLASSIERGWYFRKAGHNTMRAVMNAGALGCEIVISGKLTG 138
Query: 160 AELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
+ SR E + G + +D G A A G+ G KV + D V +
Sbjct: 139 S-RSRVEKMVNGYIKHAGKPVDDIVDDGFATAVKKLGTLGCKVRIIHPDAVLPDSYRLKN 197
Query: 218 AEH 220
AE
Sbjct: 198 AEE 200
>gi|170516818|gb|ACB15220.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
DeepAnt-15E7]
Length = 258
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 55/189 (29%), Positives = 87/189 (46%), Gaps = 4/189 (2%)
Query: 35 EDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN- 93
E +REYL ++AG + RT +I + + + G +IG++G I ++ +L N
Sbjct: 16 ERQLVREYLLRETERAGFGGLTFNRTPDGTKISLRAEQVGRVIGRRGKVIHELSARLKND 75
Query: 94 MTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIA 153
HL V EV +P +NA ++A ++ LER FRRA Q M GA G V+
Sbjct: 76 FFLDRPHLDVEEVTEPRLNAQIMASRMSSSLERGWFFRRAGHGTAQQIMDAGARGCLVVL 135
Query: 154 SGRLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
SG++ GA R E + +G + +T +D G + A G+ G V + D
Sbjct: 136 SGKITGA-RHRVEKFQQGHIKFCGETALEFMDIGFSTAVKKLGTIGCTVRIMRPDAKLPH 194
Query: 212 DSTIPAAEH 220
+ I
Sbjct: 195 EIIITERAD 203
>gi|283050713|gb|ADB07800.1| ribosomal protein S3 [Luziola fluitans]
Length = 181
Score = 119 bits (299), Expect = 3e-25, Method: Composition-based stats.
Identities = 51/181 (28%), Positives = 85/181 (46%), Gaps = 32/181 (17%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60
Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88
+ +I I++ II++ P L+ K ++EK
Sbjct: 61 SDSSSEVITHNRKMDSGSSSEVITRIEIQKEIDTIHIIIHIGFPNLLKKKGAIEELEKDL 120
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG 148
+K N N +++ + +V +P ++A+ IA QL+ RV FR+AMK+A++ + G
Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIEFTKKADIKG 180
Query: 149 V 149
V
Sbjct: 181 V 181
>gi|167945359|ref|ZP_02532433.1| 30S ribosomal protein S3 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 102
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 44/96 (45%), Positives = 64/96 (66%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P RLG+ W S+W+A Y LL+ DL +R++L+ L QA V++I I+R
Sbjct: 1 MGQKVHPTGIRLGIVKDWTSKWYADSKHYADLLNNDLSVRDFLKKRLYQASVSRIQIDRP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN 96
KN I V++ARPGL+IGKKG I+ +R ++S M
Sbjct: 61 AKNAHITVHTARPGLVIGKKGGHIDALRNEVSKMMG 96
>gi|312137081|ref|YP_004004418.1| ssu ribosomal protein s3p [Methanothermus fervidus DSM 2088]
gi|311224800|gb|ADP77656.1| SSU ribosomal protein S3P [Methanothermus fervidus DSM 2088]
Length = 217
Score = 118 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 55/212 (25%), Positives = 93/212 (43%), Gaps = 15/212 (7%)
Query: 30 GALLHEDLK---IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK 86
+ E LK I E+L+ L++AG + I+ T I +Y+ RPGL+IG+ G + +
Sbjct: 4 KEFIAESLKRAEIDEFLEKELERAGYGGMDIQLTPLGTMITIYAERPGLVIGRGGRTVRR 63
Query: 87 IRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG 145
+ L + V EV PE+N ++A IA LER + FRR ++ M G
Sbjct: 64 LTNILRKRFGLDNPQIEVKEVEVPELNPKIMAHRIASMLERGMHFRRVAYGTLRRIMAAG 123
Query: 146 ADGVKVIASGRLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVS 203
A G ++ SG++ GA + + + EG + + + G A A+ G G+ V +
Sbjct: 124 AQGAEITISGKIRGA-RATSVKFTEGHIKKCGEPAEKFVKTGFATAQLKPGVLGVHVKIM 182
Query: 204 LRDEVSDSDSTIP--------AAEHRVVEKDS 227
+ I + VE+ +
Sbjct: 183 PPGVKLPDEIKIKKEALKETESKPEESVEEGA 214
>gi|115350016|ref|YP_764382.1| ribosomal protein S3 [Stigeoclonium helveticum]
gi|122165165|sp|Q06SI4|RR3_STIHE RecName: Full=30S ribosomal protein S3, chloroplastic
gi|98990230|gb|ABF60197.1| ribosomal protein S3 [Stigeoclonium helveticum]
Length = 1126
Score = 118 bits (297), Expect = 5e-25, Method: Composition-based stats.
Identities = 55/165 (33%), Positives = 86/165 (52%), Gaps = 3/165 (1%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIH 100
++L + + L+ KN + S + + K + + L M +
Sbjct: 956 KFLAKKTIKKKLKHFLVLMALKNNYTNLSSLKNIYDV-KTFAKLCENLTNLQTMPKVSV- 1013
Query: 101 LSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRF-GADGVKVIASGRLNG 159
+ + +V +P+ A +A + + LE+R FR MKRA + AM G+K+ SGRLNG
Sbjct: 1014 IELVKVHQPKQYAVCLANFVVENLEKRFSFRSTMKRASEQAMSTANVKGIKIQISGRLNG 1073
Query: 160 AELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
AE++RTE +G VPLQTLRA+IDY A+T YG G+KV++
Sbjct: 1074 AEIARTEWLRDGVVPLQTLRANIDYSYKTAKTIYGILGVKVWLFK 1118
Score = 76.2 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 36/72 (50%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P +R+G+ ++RWFA +Y + ED +R+ L +L + + E
Sbjct: 1 MGQKIHPYGYRVGITQPHSARWFANTYQYPQYVFEDFLLRQSLFKNLPVENLPRKRTEDK 60
Query: 61 HKNCRIIVYSAR 72
+ + + R
Sbjct: 61 SETKLVQIKIER 72
>gi|295154340|gb|ADF83079.1| ribosomal protein S3 [Urochondra setulosa]
Length = 175
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 52/175 (29%), Positives = 93/175 (53%), Gaps = 17/175 (9%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDASSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N ++++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQKLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPL 175
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +GR+PL
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIQIAGRLGGKEIARAECIKKGRLPL 175
>gi|193083750|gb|ACF09437.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
SAT1000-15-B12]
Length = 259
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 4/184 (2%)
Query: 35 EDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM 94
E +REYL ++AG + RT + ++ + + + G +IG++G I +++++L N
Sbjct: 16 ERQLVREYLLRETERAGFGGLSFNRTPEGTKVTLQAEQVGRVIGRRGKVIHELQRRLQND 75
Query: 95 TN-SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIA 153
HL V EV + ++A ++A +A LER FRRA Q+ M GA G VI
Sbjct: 76 FILENPHLDVEEVAESRLSAQIMASRLASSLERGWFFRRAGHSTAQNIMDAGARGCLVIL 135
Query: 154 SGRLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
SG++ G R E + +G V +T +D G + A G+ G V +
Sbjct: 136 SGKITGP-RHRVEKFQQGHVKFCGETALEFMDTGFSTAVKKLGTIGCTVKIMRPGVKLPH 194
Query: 212 DSTI 215
+ I
Sbjct: 195 EIDI 198
>gi|282164896|ref|YP_003357281.1| 30S ribosomal protein S3P [Methanocella paludicola SANAE]
gi|282157210|dbj|BAI62298.1| 30S ribosomal protein S3P [Methanocella paludicola SANAE]
Length = 292
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 58/189 (30%), Positives = 93/189 (49%), Gaps = 5/189 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLS-NMTN 96
I E+ L++AG + I RT +I + + +PG+IIGK G I K K L
Sbjct: 16 MIDEFFLEKLERAGYGGMDINRTPMGTQITIRAEKPGMIIGKSGKMIRKFTKDLDVRFKM 75
Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156
+ V EV +PE+NA ++A +A LER FR+A + +Q M GA GV+++ +G+
Sbjct: 76 DNPQIDVQEVKRPELNAQMMATRLANALERGWYFRKAGQSTLQRIMDSGAMGVEIVIAGK 135
Query: 157 LNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRD-EVSDSDS 213
L G RTE ++ G + + + +D G A A+ G G+KV + + D
Sbjct: 136 LTGP-RKRTEKFIAGYIKHCGKPVEEFVDVGYARAKKKLGIIGVKVRIMPPGSVLPDHIE 194
Query: 214 TIPAAEHRV 222
+P +
Sbjct: 195 VLPIKKEEA 203
>gi|58699232|ref|ZP_00374034.1| ribosomal protein S3 [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58534248|gb|EAL58445.1| ribosomal protein S3 [Wolbachia endosymbiont of Drosophila
ananassae]
Length = 139
Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats.
Identities = 68/136 (50%), Positives = 96/136 (70%), Gaps = 2/136 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG +NP FRL + TW+S W+A Y LH+DL IR Y+ K AGV+K++IERT
Sbjct: 1 MGN-VNPKGFRLKIINTWSSIWYAE-KGYKQGLHQDLSIRSYINESFKHAGVSKVIIERT 58
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++S+RPG+IIGKKG+DIEKI++K++ + + ++V V + EI+A LI+ SI
Sbjct: 59 IDLVSVIIHSSRPGVIIGKKGSDIEKIKQKIAEKVKNNVEVNVVGVKRSEIDAVLISNSI 118
Query: 121 AQQLERRVVFRRAMKR 136
AQQLE+RV FRRAMK+
Sbjct: 119 AQQLEKRVSFRRAMKK 134
>gi|157781646|gb|ABV72168.1| ribosomal protein S3 [Candidatus Phytoplasma omanense]
Length = 158
Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats.
Identities = 50/158 (31%), Positives = 89/158 (56%), Gaps = 4/158 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK NP RLG+ W S+W+A + L++ED +IR ++ + ++ I I+R
Sbjct: 1 MGQKSNPNGLRLGIIRQWYSQWYAEDKQVPYLIYEDFRIRSLIKKFYNRGIISHIEIKRL 60
Query: 60 -THKNCRIIV--YSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
N I + ++++ G++ G + + +K+ +K+ N ++ ++V EV + A+L+
Sbjct: 61 KKANNEEITIDLFTSKIGIVQGTEHKEQKKLLQKIEKEINKKVIINVFEVKAIDKIASLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIAS 154
AQ+IA QL++R FR K Q ++ A GVK+I S
Sbjct: 121 AQNIALQLQKRAYFRVVQKITAQKVLKSSAIGVKIIIS 158
>gi|23010683|ref|ZP_00051288.1| COG0092: Ribosomal protein S3 [Magnetospirillum magnetotacticum
MS-1]
Length = 99
Score = 118 bits (295), Expect = 7e-25, Method: Composition-based stats.
Identities = 58/99 (58%), Positives = 74/99 (74%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKINPI RLG+N TW+SRWFA EY L+HED+ IR L LKQA V+KI+IER
Sbjct: 1 MGQKINPIGLRLGINRTWDSRWFAEKGEYAKLMHEDVAIRAALMKQLKQAAVSKIVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEI 99
H+ CR+ ++S RPG++IGKKG DIEK+RK + MT ++
Sbjct: 61 HRKCRVTIHSGRPGVVIGKKGADIEKLRKLVGTMTKDDV 99
>gi|47079410|gb|AAT10153.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
DeepAnt-JyKC7]
Length = 307
Score = 117 bits (294), Expect = 9e-25, Method: Composition-based stats.
Identities = 48/186 (25%), Positives = 89/186 (47%), Gaps = 8/186 (4%)
Query: 35 EDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKL 91
E +REYL ++AG + RT + ++ + + + G +IG++G I +++ K
Sbjct: 17 ERHMVREYLLRETERAGFGGLEFNRTPEGTKVTLSAEQVGRVIGRRGKVIHELQYRLKSD 76
Query: 92 SNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKV 151
+ N + ++ E+ +P +NA ++A +A LER FRRA Q+ M GA G +
Sbjct: 77 FKLENPRLEVN--EIEEPRLNAQVMASRLASSLERGWFFRRAGHSTAQNIMDAGARGCLI 134
Query: 152 IASGRLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVS 209
I SG+++G R + + +G + +T +D G + A G+ G V +
Sbjct: 135 ILSGKISGP-RHRVQKFQQGHIKFCGETALQFMDEGFSTAVKKLGTVGCTVRIMRPGVKL 193
Query: 210 DSDSTI 215
+ I
Sbjct: 194 PHEIDI 199
>gi|207110534|ref|ZP_03244696.1| 30S ribosomal protein S3 [Helicobacter pylori HPKX_438_CA4C1]
Length = 98
Score = 117 bits (294), Expect = 1e-24, Method: Composition-based stats.
Identities = 45/78 (57%), Positives = 59/78 (75%)
Query: 131 RRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAE 190
RRAMK+ +Q+A++ GA G+KV SGRL GAE++RTE Y+EGRVPL TLRA IDYG A A
Sbjct: 1 RRAMKKVMQAALKSGAKGIKVRVSGRLAGAEIARTEWYMEGRVPLHTLRAKIDYGFAEAM 60
Query: 191 TAYGSCGIKVYVSLRDEV 208
T YG G+KV++ + +
Sbjct: 61 TVYGIIGVKVWIFKGEVL 78
>gi|325958537|ref|YP_004290003.1| 30S ribosomal protein S3 [Methanobacterium sp. AL-21]
gi|325329969|gb|ADZ09031.1| ribosomal protein S3 [Methanobacterium sp. AL-21]
Length = 299
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 7/204 (3%)
Query: 30 GALLHEDLK---IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK 86
+ E LK I EYL+ L++AG + I+ T ++VY+ RPG++IG+ G +
Sbjct: 4 KDFVTEGLKRTRIDEYLENELERAGYGGMEIQVTPLGTMVVVYAERPGMVIGRGGKTVRS 63
Query: 87 IRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG 145
I + L + V EV PE+N ++A IA L+R + FRR A++ M G
Sbjct: 64 ITQNLKTGYGLENPQVEVKEVDVPELNPKIMAHKIAAMLQRGMHFRRVAYTALRRIMGAG 123
Query: 146 ADGVKVIASGRLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVS 203
A GV+V SG++ G+ + + +G + + + +G A + G GI V +
Sbjct: 124 AQGVEVTISGKIRGSRSAC-AKFSDGYIKKCGEPSIRFVRHGFATVQLKPGVLGINVRIM 182
Query: 204 LRDEVSDSDSTIPAAEHRVVEKDS 227
D V I E E ++
Sbjct: 183 PPDVVLPDKVDILQIEVEKPETEN 206
>gi|222480851|ref|YP_002567088.1| ribosomal protein S3 [Halorubrum lacusprofundi ATCC 49239]
gi|222453753|gb|ACM58018.1| ribosomal protein S3 [Halorubrum lacusprofundi ATCC 49239]
Length = 312
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 56/199 (28%), Positives = 99/199 (49%), Gaps = 10/199 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
+I E+ L +AG + + +T +I++ + +PG++IGK G +I KI +L + +
Sbjct: 16 QINEFFADELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGKNIRKITTELEDRFDM 75
Query: 98 E-IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156
+ + V EV +P++NA ++A +A LER FR+A + M GA G +++ SG+
Sbjct: 76 DDPQIDVQEVDEPDLNAQIVADRLANALERGWYFRKAGHTTIDRIMDAGALGAEIVLSGK 135
Query: 157 LNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLRDEVSDS--- 211
+ GA SR E + G + A +D+G VA G+ G+ V +
Sbjct: 136 VTGA-RSRVEKFNRGYIKHNGEPAQEVVDHGQGVAVMKLGTIGVNVKIIPPGAQLPDDFD 194
Query: 212 ---DSTIPAAEHRVVEKDS 227
D+ +P E V+ D+
Sbjct: 195 IREDADVPEVEQAAVDVDA 213
>gi|126178520|ref|YP_001046485.1| 30S ribosomal protein S3P [Methanoculleus marisnigri JR1]
gi|152060874|sp|A3CT03|RS3_METMJ RecName: Full=30S ribosomal protein S3P
gi|125861314|gb|ABN56503.1| SSU ribosomal protein S3P [Methanoculleus marisnigri JR1]
Length = 234
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 51/196 (26%), Positives = 100/196 (51%), Gaps = 10/196 (5%)
Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK-LSNMT 95
+++ ++L LK+AG + I RT ++ +++ +PG++IGK G + ++ + ++
Sbjct: 15 VRVEKFLTKELKRAGYGGMDIARTPLGTQVTIFAEKPGIVIGKGGKQVRQLTQDLATDYD 74
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155
+ V +V P NA ++A+ +A LER FR+A ++ M GA G +VI +G
Sbjct: 75 IESPQVEVQQVQNPNFNAQIMAERLANALERGWYFRKAGSSTIRRIMESGALGCEVIVAG 134
Query: 156 RLNGAELSRTECYLEGRV-----PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210
+L G+ SRT+ + EG + P +T+ ++ G A+A G+ G++V + D
Sbjct: 135 KLTGS-RSRTQKFTEGYIKHCGEPSETI---VEKGYALAIKKLGTIGVQVKIVPPDARLP 190
Query: 211 SDSTIPAAEHRVVEKD 226
+ E + +
Sbjct: 191 DAFDVLEPEPKKAPAE 206
>gi|20089948|ref|NP_616023.1| 30S ribosomal protein S3P [Methanosarcina acetivorans C2A]
gi|27734505|sp|Q8TRU1|RS3_METAC RecName: Full=30S ribosomal protein S3P
gi|19914909|gb|AAM04503.1| ribosomal protein S3p [Methanosarcina acetivorans C2A]
Length = 318
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 56/174 (32%), Positives = 92/174 (52%), Gaps = 4/174 (2%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEI 99
EY L +AG + + RT +I++YS +PG++IGK G I K+ + ++N +
Sbjct: 19 EYFAEQLSRAGYGGMELNRTPMGTQIVIYSEKPGMVIGKAGKVIRKLTRDVANKYSLENP 78
Query: 100 HLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNG 159
+ EV +PE+NA ++A +A +ER FR+A +++ M GA G +V+ SG+L G
Sbjct: 79 QIDAQEVKRPELNAQMMASRLAASIERGWYFRKAGHNTLRAVMNAGALGCEVVISGKLTG 138
Query: 160 AELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
A SR E +++G + + +D G AVA G+ G KV + V
Sbjct: 139 A-RSRVEKFVDGYIKHSGNPVEEVVDEGFAVAVKKLGTLGCKVRIIQPGVVLPD 191
>gi|304314259|ref|YP_003849406.1| 30S ribosomal protein S3P [Methanothermobacter marburgensis str.
Marburg]
gi|302587718|gb|ADL58093.1| 30S ribosomal protein S3P [Methanothermobacter marburgensis str.
Marburg]
Length = 275
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 57/195 (29%), Positives = 95/195 (48%), Gaps = 6/195 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN- 96
+I EYL+ L++AG + ++ T ++VY+ RPG++IG+ G + I +KL + N
Sbjct: 15 RIDEYLEKELERAGYGGMDVQVTPMGTMVVVYAERPGMVIGRGGKTVRAITQKLKSKFNL 74
Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156
+ V EV PE+N ++A IA L+R + FRR ++ M GA GV+V SG+
Sbjct: 75 ENPQVEVKEVDVPELNPRIMAHKIAAMLQRGMHFRRVAYTTMRRIMAAGAQGVEVTISGK 134
Query: 157 LNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
+ GA S T + +G + + H+ G A + G G+ V + + V
Sbjct: 135 IRGA-RSATAKFTDGYIKKCGEPSTKHVKEGFATVQLKPGVLGVYVRIMPPEVVLPDKVE 193
Query: 215 I--PAAEHRVVEKDS 227
I P E+ +
Sbjct: 194 IEAPKVTETPSEEPA 208
>gi|15678039|ref|NP_275153.1| 30S ribosomal protein S3P [Methanothermobacter thermautotrophicus
str. Delta H]
gi|6094177|sp|O26116|RS3_METTH RecName: Full=30S ribosomal protein S3P
gi|2621055|gb|AAB84528.1| ribosomal protein S3 (E.coli ) [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 258
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 59/195 (30%), Positives = 95/195 (48%), Gaps = 6/195 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN- 96
+I EYL+ L++AG + ++ T ++VY+ RPG++IG+ G + I +KL N +
Sbjct: 15 RIDEYLEKELERAGYGGMDVQVTPMGTMVVVYAERPGMVIGRGGKTVRAITQKLKNKFDL 74
Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156
+ V EV PE+N ++A IA L+R + FRR ++ M GA GV+V SG+
Sbjct: 75 ENPQVEVKEVDVPELNPKIMAHKIAAMLQRGMHFRRVAYTTMRRIMAAGAQGVEVTISGK 134
Query: 157 LNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
+ GA S T + +G + + H+ G A + G G+ V + D V
Sbjct: 135 IRGA-RSATAKFTDGYIKKCGEPSVKHVREGFATVQLKPGVLGVYVRIMPPDVVLPDKVE 193
Query: 215 I--PAAEHRVVEKDS 227
I P E+ S
Sbjct: 194 IEDPRVTETPAEEAS 208
>gi|14591528|ref|NP_143610.1| 30S ribosomal protein S3P [Pyrococcus horikoshii OT3]
gi|6647791|sp|O59424|RS3_PYRHO RecName: Full=30S ribosomal protein S3P
gi|3258205|dbj|BAA30888.1| 210aa long hypothetical 30S ribosomal protein S3 [Pyrococcus
horikoshii OT3]
Length = 210
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 58/194 (29%), Positives = 100/194 (51%), Gaps = 13/194 (6%)
Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-S 97
I E+L+ L++AG + I++T ++I+++A PG +IG+ G I ++ + L
Sbjct: 17 IDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIRELTRILERQFGLE 76
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ V E+ P +NA + A IAQ LER + FRRA A+++ M GA GV++ SG+L
Sbjct: 77 NPQIDVQEIKNPYLNAKVQAVRIAQALERGIHFRRAAYSAMRAIMNNGARGVEIRLSGKL 136
Query: 158 NGAELSRTECYLEGRV-----PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
G E +++ + +G + P +TL + G A A G G+KV + D +
Sbjct: 137 TG-ERAKSVRFYQGYLAKVGNPAETLVSK---GYAQALLKLGVIGVKVAIMPPDARLPDE 192
Query: 213 STIPAAEHRVVEKD 226
I + E++
Sbjct: 193 IEIV---EKPAEEE 203
>gi|283050717|gb|ADB07803.1| ribosomal protein S3 [Luziola fluitans]
Length = 177
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 49/177 (27%), Positives = 83/177 (46%), Gaps = 32/177 (18%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60
Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88
+ +I I++ II++ P L+ K ++EK
Sbjct: 61 SDSSSEVITQNRKMDSGSSSEVITRIEIQKEIDIIHIIIHIGFPNLLKKKGAIEELEKDL 120
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG 145
+K N N +++ + +V +P ++A+ IA QL+ RV FR+AMK+A++ +
Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKAD 177
>gi|193083860|gb|ACF09541.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
KM3-85-F5]
Length = 231
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 8/191 (4%)
Query: 35 EDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKG---TDIEKIRKKL 91
E +REYL ++AG + RT + ++ + + + G +IG++G ++++ ++
Sbjct: 15 ERQLVREYLLKETERAGFGGLHFNRTPEGTKVTLSAEQVGRVIGRRGKVIHELQRRLQED 74
Query: 92 SNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKV 151
+TN ++ V E+ INA ++A +A LER FRRA VQ+ M GA G V
Sbjct: 75 FKLTNPQLE--VEEIEDSRINAQVMASRLASSLERGWFFRRAGHSTVQNIMDAGARGCIV 132
Query: 152 IASGRLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVS 209
I SG++ GA R E + +G + +T +D G + A G+ G V +
Sbjct: 133 ILSGKITGA-RHRVEKFQKGHIKYCGETALQFMDVGFSTAVKKLGTVGCTVRIMRPGTKL 191
Query: 210 DSDSTIPAAEH 220
+ I
Sbjct: 192 PHEIAIQERHE 202
>gi|76803063|ref|YP_331158.1| 30S ribosomal protein S3P [Natronomonas pharaonis DSM 2160]
gi|91207821|sp|Q3IMY2|RS3_NATPD RecName: Full=30S ribosomal protein S3P
gi|76558928|emb|CAI50524.1| ribosomal protein S3 [Natronomonas pharaonis DSM 2160]
Length = 305
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 54/193 (27%), Positives = 93/193 (48%), Gaps = 5/193 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN- 96
+I E+ L +AG + + +T +I++ + +PG++IGK G +I KI L
Sbjct: 16 QIDEFFSEELSRAGYGGMEVAKTPMGTQIVLKAEKPGMVIGKGGKNIRKITTTLEEEFGL 75
Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156
+ + V EV +P++NA ++A +A LER FR+A + M GA G ++I SG+
Sbjct: 76 EDPQVDVQEVDEPDLNAQIVADRLANALERGWYFRKAGHTTIDRIMESGALGAEIILSGK 135
Query: 157 LNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLRD-EVSDSDS 213
+ GA SR E + G + A +D G A G+ G++V + + E+ D
Sbjct: 136 VTGA-RSRVEKFNRGYIKHNGEPAESIVDSGVGTAVMKLGTIGVQVKIIPPEAELPDDFE 194
Query: 214 TIPAAEHRVVEKD 226
E ++
Sbjct: 195 VYEDIEVEDFVEE 207
>gi|154150081|ref|YP_001403699.1| 30S ribosomal protein S3P [Candidatus Methanoregula boonei 6A8]
gi|171769709|sp|A7I5P5|RS3_METB6 RecName: Full=30S ribosomal protein S3P
gi|153998633|gb|ABS55056.1| ribosomal protein S3 [Methanoregula boonei 6A8]
Length = 231
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 53/190 (27%), Positives = 95/190 (50%), Gaps = 10/190 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK-LSNMTN 96
++ +YL LK+AG + I RT ++ +++ +PG++IGK G + ++ + N
Sbjct: 16 RVEKYLTKELKRAGFGGMDIARTPLGTQVTIFAEKPGIVIGKGGKLVHQLTQDLAQNYGV 75
Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156
+ V +V P NA ++A+ +A LER FR+A ++ M GA G +V+ +G+
Sbjct: 76 ESPQIEVQQVQNPSFNAQIMAERLANALERGWYFRKAGSSIMRRVMDSGALGCEVVIAGK 135
Query: 157 LNGAELSRTECYLEGRV-----PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
L GA +RT+ + EG + P T+ ++ G A+A G G++V + D
Sbjct: 136 LTGA-RARTQKFTEGYIKHCGEPSNTI---VEKGYAIAIKKLGVIGVQVKIVPADAKMPD 191
Query: 212 DSTIPAAEHR 221
I E +
Sbjct: 192 HFAIIEQEKK 201
>gi|307354329|ref|YP_003895380.1| 30S ribosomal protein S3 [Methanoplanus petrolearius DSM 11571]
gi|307157562|gb|ADN36942.1| ribosomal protein S3 [Methanoplanus petrolearius DSM 11571]
Length = 241
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 54/185 (29%), Positives = 90/185 (48%), Gaps = 4/185 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN- 96
++ +YL+ LK+AG I RT +I +Y+ +PG++IGK G + +I L N
Sbjct: 16 RVEKYLRKELKRAGYGGTEIVRTPLGTQITIYAEKPGIVIGKGGKVVREITSNLQNDYGI 75
Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156
+ V +V P NA ++A+ +A LER FR+A ++ M GA G +V+ SG+
Sbjct: 76 ESPQIEVQQVENPAFNAQIMAERLANSLERGWYFRKAGTSIIRRIMESGALGCEVVISGK 135
Query: 157 LNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
L GA SR + + EG + + +++G A+A G G +V +
Sbjct: 136 LTGA-RSRVQKFTEGYIKHAGEPSETIVEHGFAIAIKKLGVIGCQVKIVPPGAQLPDHFE 194
Query: 215 IPAAE 219
+ E
Sbjct: 195 VLEPE 199
>gi|124484916|ref|YP_001029532.1| 30S ribosomal protein S3P [Methanocorpusculum labreanum Z]
gi|152060873|sp|A2SPK9|RS3_METLZ RecName: Full=30S ribosomal protein S3P
gi|124362457|gb|ABN06265.1| SSU ribosomal protein S3P [Methanocorpusculum labreanum Z]
Length = 231
Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 52/196 (26%), Positives = 93/196 (47%), Gaps = 9/196 (4%)
Query: 25 RGSEYGALLHEDLKIR--EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT 82
+ K+R +YL LK+AG + I RT ++ +++ +PG++IGK G
Sbjct: 4 EKKFVADGVR---KVRVEQYLNKELKRAGYGGMDIVRTPVGTQVTIFAEKPGIVIGKGGK 60
Query: 83 DIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSA 141
+ ++ LS + + V +V P +NA ++A+ +A LER FR+A ++
Sbjct: 61 LVRQLTTDLSTVYGIESPQVEVQQVANPNLNAQIMAERLANALERGWYFRKAGTSVIRRV 120
Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIK 199
M GA G +VI +G+L GA +R + ++EG + + ++ G A A G G++
Sbjct: 121 MDSGALGCEVIIAGKLTGA-RARVQKFVEGYIKHSGEPSESIVEKGYATAIKKLGIIGVQ 179
Query: 200 VYVSLRDEVSDSDSTI 215
V + I
Sbjct: 180 VKIVPPGAKLPDQFEI 195
>gi|302748619|gb|ADL63790.1| ribosomal protein S3 [Cannabis sativa]
Length = 494
Score = 115 bits (289), Expect = 3e-24, Method: Composition-based stats.
Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 4/170 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 325 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 383
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ---SAMRFGADGVKVIAS 154
+ ++ +A+LIAQ I+ QL + FR + V+ M+ G +G+++ S
Sbjct: 384 NTLIESVKIKSVYQSASLIAQDISFQLRNKTSFRSIFSQIVKGIPLVMKKGVEGIRICCS 443
Query: 155 GRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
GRL GAE++RTEC G+ IDY +A T YG G+KV++S
Sbjct: 444 GRLEGAEIARTECGKYGKTSRNVFNQKIDYASAEVSTRYGILGVKVWISY 493
>gi|300710381|ref|YP_003736195.1| 30S ribosomal protein S3P [Halalkalicoccus jeotgali B3]
gi|299124064|gb|ADJ14403.1| 30S ribosomal protein S3P [Halalkalicoccus jeotgali B3]
Length = 302
Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 52/181 (28%), Positives = 91/181 (50%), Gaps = 4/181 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN- 96
+I E+ L++AG + + +T +I++ + +PG++IGK G +I K+ ++L +
Sbjct: 16 QIDEFFATELERAGYGGMEVAKTPMGTQIVLKAEKPGMVIGKGGKNIRKVTRQLEERFDL 75
Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156
+ + V EV +P++NA ++A +A LER FR+A + M GA G +++ SG+
Sbjct: 76 EDPQIDVQEVDEPDLNAQIVADRLANALERGWYFRKAGHTTIDRIMDAGALGAEIVLSGK 135
Query: 157 LNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
+ GA SR E + G V A +D G A G+ G+ V + D
Sbjct: 136 VTGA-RSRVEKFNRGYVKHNGEPAEDIVDKGLGTAVMKLGTIGVNVKIIPPGAQLPDDFE 194
Query: 215 I 215
I
Sbjct: 195 I 195
>gi|134045220|ref|YP_001096706.1| 30S ribosomal protein S3P [Methanococcus maripaludis C5]
gi|189045017|sp|A4FWB6|RS3_METM5 RecName: Full=30S ribosomal protein S3P
gi|132662845|gb|ABO34491.1| SSU ribosomal protein S3P [Methanococcus maripaludis C5]
Length = 211
Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 57/192 (29%), Positives = 102/192 (53%), Gaps = 4/192 (2%)
Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-S 97
I EY + L +AG + I +++T RI V++ +PG +IG+KG ++++ + L+
Sbjct: 16 IDEYFKTKLVRAGYSHIDLKKTPIGTRITVFAEKPGFVIGRKGKMVKELTETLAKEYAVK 75
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ V +V P+++ ++ IA LER + FRR A++ M GA GV +I SG+L
Sbjct: 76 NPQIEVKQVENPDLDPAIVGHKIASSLERGMHFRRTAHSAIRRVMGSGAKGVSIIVSGKL 135
Query: 158 NGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
+G E SRTE +++G + + A ++ +A+ G G+ V + D + TI
Sbjct: 136 SG-ERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGVVGVTVKIMKPDVTLPDEITI 194
Query: 216 PAAEHRVVEKDS 227
+ E + V + S
Sbjct: 195 LSGEIKEVTEYS 206
>gi|225024796|ref|ZP_03713988.1| hypothetical protein EIKCOROL_01683 [Eikenella corrodens ATCC
23834]
gi|224942503|gb|EEG23712.1| hypothetical protein EIKCOROL_01683 [Eikenella corrodens ATCC
23834]
Length = 104
Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 46/104 (44%), Positives = 75/104 (72%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FRL VN W+S+WFA+ +E+ A+L +D+ +R+YL+ L A V +++IER
Sbjct: 1 MGQKIHPTGFRLAVNKDWSSKWFAKSTEFAAVLKQDIDVRDYLRKRLANASVGRVVIERP 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVN 104
K+ RI +++ARPG++IGKKG DIE +++ L + +H+++
Sbjct: 61 AKSARITIHTARPGVVIGKKGEDIEVLKQDLQQLLGVPVHVNIE 104
>gi|150406487|ref|YP_001315118.1| ribosomal protein S3 [Chlorokybus atmophyticus]
gi|126507724|gb|ABO15121.1| ribosomal protein S3 [Chlorokybus atmophyticus]
Length = 736
Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats.
Identities = 46/167 (27%), Positives = 79/167 (47%), Gaps = 4/167 (2%)
Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE 98
IR+ + + + T N ++ RP K I+ +SN T
Sbjct: 572 IRDKKNKENLNSNPFQTKVRSTDSNFHLL---NRPLQRSQKILNFTNHIKSIISNGTLCH 628
Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGA-DGVKVIASGRL 157
+ ++ +P +A L+AQ IA +LE+R FR+ ++ ++ R +G+++ +GR
Sbjct: 629 TSIRPVKIKEPFKSAELVAQDIAFKLEKRESFRKISRQIIKDIKRCKYVEGIRITCAGRF 688
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
NGAE++R E G+ L IDY + A T YG G+KV++S
Sbjct: 689 NGAEMARVESRRFGQTSLHVFSKKIDYSSKTAYTPYGLFGVKVWISY 735
Score = 61.9 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--HLKQAGVAKILIE 58
MGQK NPI R +N +S W+ Y LL DL +R Y Q L + + +++
Sbjct: 1 MGQKTNPISVRNQLNRAPDSCWY-NDYNYANLLFHDLNLRSYYQSLLRLIKLNSGRCILQ 59
Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDI 84
+ K ++ + + KKGT I
Sbjct: 60 ISPKKVSLVFFYSNNLTYQSKKGTPI 85
>gi|88603493|ref|YP_503671.1| 30S ribosomal protein S3P [Methanospirillum hungatei JF-1]
gi|121731027|sp|Q2FT39|RS3_METHJ RecName: Full=30S ribosomal protein S3P
gi|88188955|gb|ABD41952.1| SSU ribosomal protein S3P [Methanospirillum hungatei JF-1]
Length = 237
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 56/194 (28%), Positives = 97/194 (50%), Gaps = 13/194 (6%)
Query: 38 KIR--EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95
K+R +L LK+AG + + RT ++ +++ +PG++IGK G + + + L+
Sbjct: 14 KVRVERHLGHELKRAGYGGMDLIRTPLGTQVTIFAEKPGIVIGKGGKVVRTLTQDLATTY 73
Query: 96 NSE-IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIAS 154
E + V +V P +NA ++A+ +A LER FR+A ++ M GA G +V+ S
Sbjct: 74 GVESPQIEVQQVDNPNLNAQIMAERLASALERGWYFRKAGSSTLRRIMDSGALGCEVVIS 133
Query: 155 GRLNGAELSRTECYLEGRV-----PLQTLRAHIDYGTAVAETAYGSCGIKVY-VSLRDEV 208
G+L GA R + + EG + P+ TL +D G AVA G G++V + ++
Sbjct: 134 GKLTGA-RGRVQKFTEGYIKHSGDPVNTL---VDKGYAVAIKKLGVIGVQVRLIPPGAQL 189
Query: 209 SDSDSTIPAAEHRV 222
D A +
Sbjct: 190 PDHFEVTAAVTKKQ 203
>gi|110668735|ref|YP_658546.1| 30S ribosomal protein S3P [Haloquadratum walsbyi DSM 16790]
gi|121689634|sp|Q18GF5|RS3_HALWD RecName: Full=30S ribosomal protein S3P
gi|109626482|emb|CAJ52943.1| ribosomal protein S3 [Haloquadratum walsbyi DSM 16790]
Length = 323
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 55/206 (26%), Positives = 101/206 (49%), Gaps = 5/206 (2%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A ++ + +I E+ L +AG + + +T +I++ + +PG++IGK G +
Sbjct: 2 ADEHQFIENGLQRSQIDEFFADELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGKN 61
Query: 84 IEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAM 142
I K+ ++L + N + + V EV +P++NA ++A +A LER FR+A + +
Sbjct: 62 IRKVTRELEDRFNLDDPQIDVQEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRII 121
Query: 143 RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKV 200
GA G +++ SG++ GA SR E + G + A +D G VA G+ G+ V
Sbjct: 122 ESGALGAEIVLSGKVTGA-RSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGVTV 180
Query: 201 YVSLRD-EVSDSDSTIPAAEHRVVEK 225
+ E+ D + VE+
Sbjct: 181 KIIPPGAELPDDFEIHDDVDVEPVEQ 206
>gi|77024944|gb|ABA61371.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
HF70_59C08]
Length = 269
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 55/189 (29%), Positives = 93/189 (49%), Gaps = 4/189 (2%)
Query: 35 EDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM 94
E L +RE+L ++AG + +RT + ++ + + R G++IG+KG I +++++L N
Sbjct: 16 ERLLVREFLLSKTEKAGFGGLDFQRTPEGTKVTLSAERVGMVIGRKGKIINELQRRLQND 75
Query: 95 TN-SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIA 153
N L V E+ P +NA ++A +A LER FRRA ++ + M GA G V+
Sbjct: 76 FNLENPRLEVAEIDNPALNAQVMASKLASALERGWYFRRAGHSSLLNIMDAGAKGCLVVL 135
Query: 154 SGRLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
SG+L G+ +RT+ + G + T +D G AV G+ G V +
Sbjct: 136 SGKLTGS-RNRTQKFQAGHIKYCGDTAIQFMDVGKAVCVKKLGTIGCTVAIMRPGSKLPH 194
Query: 212 DSTIPAAEH 220
+ I
Sbjct: 195 EIRIKERHE 203
>gi|284162454|ref|YP_003401077.1| ribosomal protein S3 [Archaeoglobus profundus DSM 5631]
gi|284012451|gb|ADB58404.1| ribosomal protein S3 [Archaeoglobus profundus DSM 5631]
Length = 219
Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats.
Identities = 61/184 (33%), Positives = 96/184 (52%), Gaps = 3/184 (1%)
Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN 96
LK++E+L+ +K AG + I RT ++ ++ RPGL+IG+ G I+ +++KL
Sbjct: 15 LKVKEWLKEEVKNAGFGGVDIVRTPLGTQVSLFVERPGLVIGRGGRRIKILQEKLKEFGL 74
Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156
LSV+EV +PE NA L+A +A+ LER FRRA R + M GA G ++ SG+
Sbjct: 75 DNPQLSVDEVKRPEFNAQLMATLLARALERGWYFRRAGYRFLYRIMEAGAKGCQIEISGK 134
Query: 157 LNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
L +E +RTE + G + A+ +D G +A G G+ V + D +
Sbjct: 135 LV-SERARTEKFTAGTIVHTGDPAYELVDKGFDIAIKKLGVYGVSVKIIPPDVELPDEFK 193
Query: 215 IPAA 218
I
Sbjct: 194 IKEV 197
>gi|304322985|ref|YP_003795523.1| ribosomal protein S3 [Floydiella terrestris]
gi|270048184|gb|ACZ58479.1| ribosomal protein S3 [Floydiella terrestris]
Length = 611
Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats.
Identities = 51/167 (30%), Positives = 77/167 (46%), Gaps = 6/167 (3%)
Query: 44 QCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-----SE 98
+ I + + + + KK D E +
Sbjct: 439 NKKYQSLISRAIQKRMKKNLILMSLRNRFDKVANFKKVYDTENFTTLCEKIAKIQTFPKI 498
Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMR-FGADGVKVIASGRL 157
+ V P + A +A I ++L++R FR +MK+A + AM+ G G+K+ +GRL
Sbjct: 499 TSIEFVSVKTPTLYAVCLANFIVEKLQKRFSFRGSMKKAKEDAMKTPGIKGIKIQIAGRL 558
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
NGAE++RTE GRVPLQTL+A IDY A T YG G+KV++
Sbjct: 559 NGAEIARTEWMRAGRVPLQTLKAKIDYSYKTASTIYGILGVKVWLFK 605
Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/147 (21%), Positives = 54/147 (36%), Gaps = 11/147 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI+P FR+G+ +RWFA +Y + ED IR+ L L + K +E +
Sbjct: 1 MGQKIHPFGFRVGITQKHYARWFASPDKYPQYVLEDFLIRKSLYKLLPPENLPKK-MEDS 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
K + + R + + N S + K + +++
Sbjct: 60 GKMRVVHIKIERF----------LRNTIQIKIYAVNPGAFASTKKKTKKVLKNRFTSENR 109
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGAD 147
Q + R ++ K+ A
Sbjct: 110 NAQSKNRPGQKKNFKQNKPRAFGKNKQ 136
>gi|150401811|ref|YP_001325577.1| 30S ribosomal protein S3P [Methanococcus aeolicus Nankai-3]
gi|171460867|sp|A6UWU3|RS3_META3 RecName: Full=30S ribosomal protein S3P
gi|150014514|gb|ABR56965.1| ribosomal protein S3 [Methanococcus aeolicus Nankai-3]
Length = 208
Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats.
Identities = 55/184 (29%), Positives = 98/184 (53%), Gaps = 4/184 (2%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRK-KLSNMTNSEI 99
EYL+ L +AG + + +++T RI V++ +PG +IG+KG ++++ + + ++
Sbjct: 18 EYLKNKLPRAGYSHMDVKKTPIGTRITVFAEKPGFVIGRKGKMVKELTETIATKYGVNKP 77
Query: 100 HLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNG 159
+ V ++ P+++A ++AQ IA LER + FRR A++ M GA GV VI SG+L G
Sbjct: 78 QIEVKQIESPDLDAGVVAQKIASSLERGMHFRRVAHSAIRRVMAQGAKGVVVIVSGKLTG 137
Query: 160 AELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
E SRTE Y+EG + + +D +A+ G G+ V + + + I
Sbjct: 138 -ERSRTEKYMEGYMKHCGEPSEELVDQCHKIAKLKLGVVGVTVKIMPPEITLPDEIVIKD 196
Query: 218 AEHR 221
+
Sbjct: 197 VPSK 200
>gi|56181326|gb|AAV83757.1| ribosomal protein S3 [Halimeda melanesica]
Length = 219
Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 77/161 (47%), Gaps = 17/161 (10%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKNYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATL-- 115
+ I++ + +P ++IGKKG +++ +K++ + + + KP++ L
Sbjct: 61 IEDHIEIVIRAQKPEILIGKKGENLKNFQKEIKKLIFKYRGFSSNQDAQTKPKLKVILYV 120
Query: 116 ---------IAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144
IA + + LE+R+ ++ K+ ++ +
Sbjct: 121 IRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 161
>gi|292656679|ref|YP_003536576.1| 30S ribosomal protein S3 [Haloferax volcanii DS2]
gi|291370935|gb|ADE03162.1| ribosomal protein S3 [Haloferax volcanii DS2]
Length = 304
Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats.
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 9/212 (4%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A ++ + +I E+ L +AG + + +T +I++ + +PG++IGK G +
Sbjct: 2 ADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGKN 61
Query: 84 IEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAM 142
I K+ ++L N + + V EV +P++NA ++A +A LER FR+A + M
Sbjct: 62 IRKVTRELEERFNLDDPQIDVQEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIM 121
Query: 143 RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKV 200
GA G +++ SG++ GA SR E + G + A +D G VA G+ G+ V
Sbjct: 122 DAGALGAEIVLSGKVTGA-RSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGVTV 180
Query: 201 YVSLRDEVSDSD-----STIPAAEHRVVEKDS 227
+ D P A ++ E +S
Sbjct: 181 KIIPPGARLPDDFEVEEDANPDAVEQIEETES 212
>gi|84489702|ref|YP_447934.1| 30S ribosomal protein S3P [Methanosphaera stadtmanae DSM 3091]
gi|121729293|sp|Q2NFW2|RS3_METST RecName: Full=30S ribosomal protein S3P
gi|84373021|gb|ABC57291.1| 30S ribosomal protein S3P [Methanosphaera stadtmanae DSM 3091]
Length = 252
Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 11/204 (5%)
Query: 30 GALLHEDLK---IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD--- 83
+ E LK I EYL+ L++AG + I+ T +IVY+ +PG++IG+ G
Sbjct: 4 KDFVKEGLKRTRIDEYLETKLERAGYGGMDIQVTPVGTMVIVYAEKPGMVIGRGGKTVRA 63
Query: 84 IEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMR 143
I K K ++ N ++ V EV PE+N ++A + L+R + FRR ++ M
Sbjct: 64 ITKTLKNNFDLENPQVE--VKEVDVPELNPRIMAHKVVAMLQRGMQFRRVAYSIIRRIMS 121
Query: 144 FGADGVKVIASGRLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVY 201
GA GV+V SG++ G+ + + EG + + ++ G A + G GI V
Sbjct: 122 AGAQGVEVTISGKIRGSRSAC-AKFNEGYIKKCGEPSIKYVKEGFATVQLKPGVLGIYVR 180
Query: 202 VSLRDEVSDSDSTIPAAEHRVVEK 225
+ + + I E VE+
Sbjct: 181 IMPPEVTLPDNIEISEPEIVDVEE 204
>gi|56181230|gb|AAV83709.1| ribosomal protein S3 [Halimeda borneensis]
gi|56181232|gb|AAV83710.1| ribosomal protein S3 [Halimeda borneensis]
gi|56181234|gb|AAV83711.1| ribosomal protein S3 [Halimeda borneensis]
gi|56181242|gb|AAV83715.1| ribosomal protein S3 [Halimeda borneensis]
gi|56181244|gb|AAV83716.1| ribosomal protein S3 [Halimeda borneensis]
gi|56181252|gb|AAV83720.1| ribosomal protein S3 [Halimeda borneensis]
gi|56181254|gb|AAV83721.1| ribosomal protein S3 [Halimeda borneensis]
gi|56181256|gb|AAV83722.1| ribosomal protein S3 [Halimeda borneensis]
Length = 230
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 19/163 (11%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKNYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATL---- 115
+ I++ + +P ++IGKKG +++ +K++ + S N+ + L
Sbjct: 61 IEDHIEIVIRAQKPEILIGKKGENLKNFQKEIKKLIFKYRGFSSNKSRDVQSKQKLKVIL 120
Query: 116 -----------IAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144
IA + + LE+R+ ++ K+ ++ +
Sbjct: 121 YVIRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 163
>gi|56181236|gb|AAV83712.1| ribosomal protein S3 [Halimeda borneensis]
gi|56181238|gb|AAV83713.1| ribosomal protein S3 [Halimeda borneensis]
gi|56181240|gb|AAV83714.1| ribosomal protein S3 [Halimeda borneensis]
Length = 230
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 19/163 (11%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKNYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATL---- 115
+ I++ + +P ++IGKKG +++ +K++ + S N+ + L
Sbjct: 61 IEDHIEIVIRAQKPEILIGKKGENLKNFQKEIKKLIFKYRGFSSNKSRDVQSKQKLKVIL 120
Query: 116 -----------IAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144
IA + + LE+R+ ++ K+ ++ +
Sbjct: 121 YVIRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 163
>gi|284165498|ref|YP_003403777.1| ribosomal protein S3 [Haloterrigena turkmenica DSM 5511]
gi|284015153|gb|ADB61104.1| ribosomal protein S3 [Haloterrigena turkmenica DSM 5511]
Length = 317
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 4/195 (2%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A ++ + +I E+ Q L +AG + + +T +I++ + +PG++IGK G +
Sbjct: 2 ADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGEN 61
Query: 84 IEK-IRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAM 142
I K + + V EV +P++NA ++A +A LER FR+A + M
Sbjct: 62 IRKVTTALEEKFNLEDPQIDVQEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIM 121
Query: 143 RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKV 200
GA G +++ SG++ GA SR E + G + A +D+G VA G+ G+ V
Sbjct: 122 EAGALGAEIVLSGKVTGA-RSRVEKFNRGYIKHNGEPAEEVVDHGQGVAVMKLGTIGVDV 180
Query: 201 YVSLRDEVSDSDSTI 215
+ D I
Sbjct: 181 KIIPPGAELPDDFEI 195
>gi|291333640|gb|ADD93331.1| ribosomal protein S3 [uncultured archaeon MedDCM-OCT-S11-C441]
Length = 218
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 4/185 (2%)
Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK-LSNMTNS 97
+RE+L ++AG + RT + ++ + + + G +IG++G I ++++ +
Sbjct: 19 VREFLLKETERAGFGGLNFNRTPEGTKVTLRAEQVGRVIGRRGKVIHDLQRRLQEDFDLD 78
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
L V E+ + NA ++A +A LER FRRA VQ+ M GA G V SG++
Sbjct: 79 NPQLEVEEIEESRTNAQVMASRLASSLERGWFFRRAGHSTVQNIMDAGARGCIVTLSGKI 138
Query: 158 NGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
GA R E + +G + +T +D G + A G+ G V + + TI
Sbjct: 139 TGA-RHRVEKFQKGHIKYCGETALQLMDVGFSTAVKKLGTIGCTVRIMRPGAKLPHEITI 197
Query: 216 PAAEH 220
Sbjct: 198 QERSE 202
>gi|56181330|gb|AAV83759.1| ribosomal protein S3 [Halimeda melanesica]
Length = 221
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 76/163 (46%), Gaps = 19/163 (11%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKNYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATL---- 115
+ I++ + +P ++IGKKG +++ +K++ + S+N+ + L
Sbjct: 61 IEDHIEIVIRAQKPEILIGKKGENLKNFQKEIKKLIFKYRGFSLNKSRDAQTKPKLKVIL 120
Query: 116 -----------IAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144
IA + + LE+R+ ++ K+ ++ +
Sbjct: 121 YVIRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 163
>gi|327400866|ref|YP_004341705.1| 30S ribosomal protein S3 [Archaeoglobus veneficus SNP6]
gi|327316374|gb|AEA46990.1| ribosomal protein S3 [Archaeoglobus veneficus SNP6]
Length = 246
Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 60/206 (29%), Positives = 99/206 (48%), Gaps = 14/206 (6%)
Query: 32 LLHED----LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKI 87
ED LK++E++ ++ AG + I RT ++ ++ RPGL+IGK G I +
Sbjct: 6 KFVEDRIKKLKVKEWMIQEVRNAGFGGVDITRTPLGTQVTLFVERPGLVIGKGGRRIRAL 65
Query: 88 RKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGAD 147
++L +SV+E+ KPE NA L+A +A+ LER FR+A R + M GA
Sbjct: 66 TERLKEFGIENPQVSVDEIEKPEFNAQLMASLLARALERGWYFRKAGYRFLYRIMEAGAK 125
Query: 148 GVKVIASGRLNGAELSRTECYLEGRVPLQT---LRAHIDYGTAVAETAYGSCGIKVYVSL 204
G ++ SG+L +E +RTE +L G + + T + + G +A G G+ V +
Sbjct: 126 GCEIEISGKLT-SERARTEKFLAGTM-VHTGEPASSMVRKGFDIAIKKLGVLGVTVRIIP 183
Query: 205 RDEVSDS-----DSTIPAAEHRVVEK 225
D + T P ++
Sbjct: 184 PDVELPDEFRVKEITAPDVTEAQAQE 209
>gi|313125796|ref|YP_004036066.1| SSU ribosomal protein s3p [Halogeometricum borinquense DSM 11551]
gi|312292161|gb|ADQ66621.1| SSU ribosomal protein S3P [Halogeometricum borinquense DSM 11551]
Length = 310
Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 57/206 (27%), Positives = 98/206 (47%), Gaps = 5/206 (2%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A ++ + +I E+ L +AG + + +T +I++ + +PG++IGK G +
Sbjct: 2 ADEHQFIENGLQRSQIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGKN 61
Query: 84 IEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAM 142
I K+ K L N + + V EV +P++NA ++A +A LER FR+A + M
Sbjct: 62 IRKVTKALETRFNLEDPQIDVQEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIM 121
Query: 143 RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKV 200
GA G +++ SG++ GA SR E + G + A +D G VA G+ G+ V
Sbjct: 122 DAGALGAEIVLSGKVTGA-RSRVEKFNRGYIKHNGEPAQEIVDEGQGVAVMKLGTIGVTV 180
Query: 201 YVSLRDEVSDSD-STIPAAEHRVVEK 225
+ D A+ VE+
Sbjct: 181 KIIPPGAKLPDDFEIEEDADVEPVEQ 206
>gi|322372162|ref|ZP_08046703.1| 30S ribosomal protein S3P [Haladaptatus paucihalophilus DX253]
gi|320548171|gb|EFW89844.1| 30S ribosomal protein S3P [Haladaptatus paucihalophilus DX253]
Length = 320
Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 54/183 (29%), Positives = 92/183 (50%), Gaps = 4/183 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN- 96
+I E+ L +AG + + +T +I++ + +PG++IGK G +I KI ++L N
Sbjct: 16 QIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGKNIRKITRELGERFNL 75
Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156
+ + V EV +P++NA ++A +A LER FR+A + M GA G +++ SG+
Sbjct: 76 DDPQIDVQEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIMDSGALGAEIVLSGK 135
Query: 157 LNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
+ GA SR E + G + A +D+G VA G+ G+ V + D
Sbjct: 136 VTGA-RSRVEKFNRGYIKHNGEPAQTIVDHGQGVAVMKLGTIGVDVKIIPPGADLPDDFQ 194
Query: 215 IPA 217
I
Sbjct: 195 IEE 197
>gi|223927404|gb|ACN23325.1| ribosomal protein S3 [Halimeda goreauii]
Length = 150
Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 77/146 (52%), Gaps = 7/146 (4%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ + S+W+A Y + ED +R L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQSHLSQWYASKKNYSKYVLEDHFLRTILPKKYTKAGFEKIQISRK 60
Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVN---EVPKPEINATLI 116
+ I++++ +P + IGKKG ++E +K++ + ++ V + +A+ I
Sbjct: 61 IEGHLEIVIHAQKPDIFIGKKGENLEVFQKEIKKLLSTTDSQKPKVILYVIRRTTSASSI 120
Query: 117 AQSIAQQLERRVVFRRAM---KRAVQ 139
A + + LE+RV ++ K+ +Q
Sbjct: 121 ADFLIENLEKRVPYKLVFVLLKKHLQ 146
>gi|56181332|gb|AAV83760.1| ribosomal protein S3 [Halimeda melanesica]
Length = 219
Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 19/163 (11%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKNYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATL---- 115
+ I++ + +P ++IGKKG +++ +K++ + S N+ + L
Sbjct: 61 IEDHIEIVIRAQKPEILIGKKGENLKNFQKEIKKLIFKYRGFSSNKSRDAQTKPKLKVIL 120
Query: 116 -----------IAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144
IA + + LE+R+ ++ K+ ++ +
Sbjct: 121 YVIRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 163
>gi|52550170|gb|AAU84019.1| SSU ribosomal protein S3p [uncultured archaeon GZfos35D7]
Length = 359
Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 56/174 (32%), Positives = 86/174 (49%), Gaps = 4/174 (2%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEI 99
EY L++AG A + I RT +I +++ +PG++IGK G + + L+N +
Sbjct: 19 EYFSKQLERAGYAGMQINRTPMGTQITIFAEKPGMVIGKGGKSVRNLTSDLNNFYDLDNP 78
Query: 100 HLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNG 159
+ V V PE+NA L+A IA LER FR+A ++ M GA G +++ SG+L G
Sbjct: 79 QIDVQGVGVPELNAQLMASRIASALERGWYFRKAAHSTLRRIMGAGALGCRIVLSGKLTG 138
Query: 160 AELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
SR E +EG + A + G A A G+ G K+ + L D
Sbjct: 139 P-RSRIEKIVEGYIVHAGKPAEEIVHTGFATAVRKLGTIGCKIQIVLPDTTLPD 191
>gi|56181306|gb|AAV83747.1| ribosomal protein S3 [Halimeda incrassata]
Length = 263
Score = 113 bits (284), Expect = 2e-23, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 77/158 (48%), Gaps = 15/158 (9%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60
Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMT----------NSEIHLSVNEVPKP 109
+N I++ +P ++IGKKG +++K+ + + + ++ L V +
Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRASERQSKPKLFLEVYVIRCQ 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144
+++ A + + LE+R+ ++ K+ ++ +
Sbjct: 121 TGASSI-ADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 157
>gi|56181280|gb|AAV83734.1| ribosomal protein S3 [Halimeda incrassata]
Length = 226
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y L ED +R L +AG I I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKKYAKAGFENINISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATL-- 115
+ I++ + +P ++IGKKG +++ +K++ + ++ S N KP++ L
Sbjct: 61 IENHIEIVIRAQKPEILIGKKGENLKNFQKEIKKLIFKYRGLNQSRNAQSKPKLRVILHV 120
Query: 116 ---------IAQSIAQQLERRVVFRRAM---KRAV------QSAMRFGADGVKVIASGRL 157
IA + + LE+R+ ++ K+ + + A+R A + +S L
Sbjct: 121 IRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQRERALRSSAVSTSIDSSPGL 180
Query: 158 NGAELSRTECYLEGRVPLQTLRA 180
+ S E G V + +
Sbjct: 181 GASGGSVFEQDRTGSVNGASFNS 203
>gi|56181302|gb|AAV83745.1| ribosomal protein S3 [Halimeda incrassata]
Length = 263
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 77/158 (48%), Gaps = 15/158 (9%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60
Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMT----------NSEIHLSVNEVPKP 109
+N I++ +P ++IGKKG +++K+ + + + ++ L V +
Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRASERQSKPKLFLEVYVIRCQ 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144
+++ A + + LE+R+ ++ K+ ++ +
Sbjct: 121 TGASSI-ADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 157
>gi|223927434|gb|ACN23345.1| ribosomal protein S3 [Halimeda lacrimosa]
Length = 139
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 44/135 (32%), Positives = 77/135 (57%), Gaps = 4/135 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R LQ +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYVLEDNFLRTILQKKYSRAGFEKIQISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
+ I++++ +P ++IGKKG ++E +K++ + + ++ L V + + +A+ IA
Sbjct: 61 IENHIEIVIHAQKPDILIGKKGENLELFQKEIKQLLSKKVILY---VLRSKTSASSIADF 117
Query: 120 IAQQLERRVVFRRAM 134
I Q LE+RV ++
Sbjct: 118 IVQNLEKRVPYKLIF 132
>gi|289579904|ref|YP_003478370.1| ribosomal protein S3 [Natrialba magadii ATCC 43099]
gi|289529457|gb|ADD03808.1| ribosomal protein S3 [Natrialba magadii ATCC 43099]
Length = 335
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 4/195 (2%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A ++ + +I E+ Q L +AG + + +T +I++ + +PG++IGK G +
Sbjct: 2 ADEHQFIENGLQRSQIDEFFQEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGEN 61
Query: 84 IEK-IRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAM 142
I K + + V EV +P++NA ++A +A LER FR+A + M
Sbjct: 62 IRKVTTALEEKFNLEDPQIDVQEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIM 121
Query: 143 RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKV 200
GA G +++ SG++ GA SR E + G + A +D G A G+ G+ V
Sbjct: 122 EAGALGAEIVLSGKVTGA-RSRVEKFNRGYIKHNGEPAEEIVDEGQGTAVMKLGTIGVTV 180
Query: 201 YVSLRDEVSDSDSTI 215
+ + D I
Sbjct: 181 KIIPPNAELPDDFQI 195
>gi|56181312|gb|AAV83750.1| ribosomal protein S3 [Halimeda incrassata]
Length = 260
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 77/158 (48%), Gaps = 15/158 (9%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60
Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMT----------NSEIHLSVNEVPKP 109
+N I++ +P ++IGKKG +++K+ + + + ++ L V +
Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRASERQSKPKLFLEVYVIRCQ 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144
+++ A + + LE+R+ ++ K+ ++ +
Sbjct: 121 TGASSI-ADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 157
>gi|56181308|gb|AAV83748.1| ribosomal protein S3 [Halimeda incrassata]
Length = 263
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 77/158 (48%), Gaps = 15/158 (9%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60
Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMT----------NSEIHLSVNEVPKP 109
+N I++ +P ++IGKKG +++K+ + + + ++ L V +
Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRASERQSKPKLFLEVYVIRCQ 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144
+++ A + + LE+R+ ++ K+ ++ +
Sbjct: 121 TGASSI-ADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 157
>gi|56181286|gb|AAV83737.1| ribosomal protein S3 [Halimeda incrassata]
Length = 225
Score = 113 bits (283), Expect = 2e-23, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y L ED +R L +AG I I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKKYAKAGFENINISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATL-- 115
+ I++ + +P ++IGKKG +++ +K++ + ++ S N KP++ L
Sbjct: 61 IENHIEIVIRAQKPEILIGKKGENLKNFQKEIKKLIFKYRGLNQSRNAQSKPKLRVILHV 120
Query: 116 ---------IAQSIAQQLERRVVFRRAM---KRAV------QSAMRFGADGVKVIASGRL 157
IA + + LE+R+ ++ K+ + + A+R A + +S L
Sbjct: 121 IRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQRERALRSSAVSTSIDSSPGL 180
Query: 158 NGAELSRTECYLEGRVPLQTLRA 180
+ S E G V + +
Sbjct: 181 GASGGSVFEQDRTGSVNGASFNS 203
>gi|56181324|gb|AAV83756.1| ribosomal protein S3 [Halimeda macroloba]
Length = 229
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 50/203 (24%), Positives = 91/203 (44%), Gaps = 23/203 (11%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y L ED +R L +AG I I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKKYAKAGFENIKISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM-------------TNSEIHLSVNEV 106
+ I++ + +P ++IGKKG +++ +K++ + N + V
Sbjct: 61 IENHIEIVIRAQKPKILIGKKGENLKNFQKEIKKLIFKYRGLNQSRNAQNKPKLRVILHV 120
Query: 107 PKPEINATLIAQSIAQQLERRVVFRRAM---KRAV------QSAMRFGADGVKVIASGRL 157
+ + A+ IA + + LE+R+ ++ K+ + + A+R A + +S L
Sbjct: 121 IRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQRERALRSSAVSTSIESSPGL 180
Query: 158 NGAELSRTECYLEGRVPLQTLRA 180
A+ S E G V + +
Sbjct: 181 GAADGSVFEQDRTGSVNGASFNS 203
>gi|148807|gb|AAA86865.1| ribosomal protein S3 [Haloarcula marismortui]
Length = 304
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 55/181 (30%), Positives = 93/181 (51%), Gaps = 4/181 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN- 96
+I E+ L +AG + + +T +I++ + +PG++IGK G +I KI +L + N
Sbjct: 16 QIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGKNIRKITTELEDRFNL 75
Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156
+ + V EV +P++NA ++A +A LER FR+A + M GA G +++ SG+
Sbjct: 76 DDPQVDVQEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIMESGALGAEIVLSGK 135
Query: 157 LNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
+ GA SR E + G V A +D G VA G+ G++V + + D
Sbjct: 136 VTGA-RSRVEKFNRGYVKHNGEPAEEIVDSGVGVAVMKLGTIGVRVKIIPPNAELPDDFE 194
Query: 215 I 215
I
Sbjct: 195 I 195
>gi|55378378|ref|YP_136228.1| 30S ribosomal protein S3P [Haloarcula marismortui ATCC 43049]
gi|57015336|sp|P20281|RS3_HALMA RecName: Full=30S ribosomal protein S3P; AltName: Full=HS1;
AltName: Full=HmaS3
gi|55231103|gb|AAV46522.1| 30S ribosomal protein S3P [Haloarcula marismortui ATCC 43049]
Length = 304
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 55/181 (30%), Positives = 93/181 (51%), Gaps = 4/181 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN- 96
+I E+ L +AG + + +T +I++ + +PG++IGK G +I KI +L + N
Sbjct: 16 QIDEFFAEELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGKNIRKITTELEDRFNL 75
Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156
+ + V EV +P++NA ++A +A LER FR+A + M GA G +++ SG+
Sbjct: 76 DDPQVDVQEVDEPDLNARIVADRLANALERGWYFRKAGHTTIDRIMESGALGAEIVLSGK 135
Query: 157 LNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
+ GA SR E + G V A +D G VA G+ G++V + + D
Sbjct: 136 VTGA-RSRVEKFNRGYVKHNGEPAEEIVDSGVGVAVMKLGTIGVRVKIIPPNAELPDDFE 194
Query: 215 I 215
I
Sbjct: 195 I 195
>gi|56181310|gb|AAV83749.1| ribosomal protein S3 [Halimeda incrassata]
Length = 262
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 77/158 (48%), Gaps = 15/158 (9%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60
Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMT----------NSEIHLSVNEVPKP 109
+N I++ +P ++IGKKG +++K+ + + + ++ L V +
Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRASERQSKPKLFLEVYVIRCQ 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144
+++ A + + LE+R+ ++ K+ ++ +
Sbjct: 121 TGASSI-ADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 157
>gi|223927720|gb|ACN23468.1| ribosomal protein S3 [Halimeda cuneata]
gi|223927723|gb|ACN23470.1| ribosomal protein S3 [Halimeda cuneata]
gi|223927726|gb|ACN23472.1| ribosomal protein S3 [Halimeda cuneata]
Length = 164
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 11/165 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S W+A Y + ED +R +L +A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKYYSKYVLEDNFVRTFLSEKYSRARFEKIHISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSV------NEVPKPEINA 113
+ I++Y+ +P ++IGKKG + + K S +I + +
Sbjct: 61 IEDHLEIVIYAQKPDILIGKKGVTHFQKQIKTSIFQYRQIEWNSKLKVILYIFQCKPSAS 120
Query: 114 TLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155
+ IA I + LE+R+ ++ K+ ++ + G+K+ SG
Sbjct: 121 SAIADFIVEHLEKRIPYKVVFTLLKKHLKRTKQS-TLGMKIQISG 164
>gi|56181304|gb|AAV83746.1| ribosomal protein S3 [Halimeda incrassata]
Length = 252
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 46/193 (23%), Positives = 86/193 (44%), Gaps = 21/193 (10%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60
Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMT----------NSEIHLSVNEVPKP 109
+N I++ +P ++IGKKG +++K+ + + + ++ L V +
Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRASERQSKPKLFLEVYVIRCQ 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAM-------KRAVQSAMRFGADGVKVIASGRLNGAEL 162
+++ A + + LE+R+ ++ K+ Q + G +A+ +
Sbjct: 121 TGASSI-ADFLVENLEKRIPYKIVFVLLKKHLKKIRQREKALRSSGANAVAAQPSDRTAR 179
Query: 163 SRT--ECYLEGRV 173
+R E E V
Sbjct: 180 TRMGPETISERSV 192
>gi|296242591|ref|YP_003650078.1| 30S ribosomal protein S3P [Thermosphaera aggregans DSM 11486]
gi|296095175|gb|ADG91126.1| SSU ribosomal protein S3P [Thermosphaera aggregans DSM 11486]
Length = 229
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 53/194 (27%), Positives = 97/194 (50%), Gaps = 4/194 (2%)
Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN 96
L I E+L + K AG A + + RT R+++Y+ PG +IG+ G+ I+K+ L
Sbjct: 18 LMIDEFLANYFKDAGYAGVEVFRTPTGHRVVIYAEYPGRLIGRGGSVIKKLTTILQTRFG 77
Query: 97 -SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155
++++V+ V P++NA ++A I + LE+ + FRR M ++ M GA G ++I SG
Sbjct: 78 LENVNITVSPVMDPDLNARVVAFRIVRALEKEIPFRRVMMGMLKRIMDAGAVGAEIIISG 137
Query: 156 RLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
+L G E + E G++ + + ID A A G G++V +
Sbjct: 138 KLRG-ERATYEKMRVGKIYKAGEPVEYIIDRAVARALLKPGIYGVEVLIVKPGIKLPDHV 196
Query: 214 TIPAAEHRVVEKDS 227
I + +++++
Sbjct: 197 EIKPVKPEALKQEA 210
>gi|223927425|gb|ACN23339.1| ribosomal protein S3 [Halimeda gracilis]
Length = 138
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 44/135 (32%), Positives = 78/135 (57%), Gaps = 4/135 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A EY + ED +R LQ +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKEYSKYVLEDHFLRTRLQKKYSRAGFEKIEISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
+ I++++ +P ++IGKKG ++E +K++ + + ++ L V + + +A+ IA
Sbjct: 61 IENHIEIVIHAQKPDILIGKKGENLELFQKEIKQLLSKKVILY---VLRSKTSASSIADF 117
Query: 120 IAQQLERRVVFRRAM 134
I Q +E+RV ++
Sbjct: 118 IVQNIEKRVPYKLVF 132
>gi|56181284|gb|AAV83736.1| ribosomal protein S3 [Halimeda incrassata]
Length = 227
Score = 113 bits (282), Expect = 3e-23, Method: Composition-based stats.
Identities = 51/203 (25%), Positives = 92/203 (45%), Gaps = 23/203 (11%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y L ED +R L +AG I I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKKYAKAGFENINISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATL-- 115
+ I++ + +P ++IGKKG +++ +K++ + ++ S N KP++ L
Sbjct: 61 IENHIEIVIRAQKPEILIGKKGENLKNFQKEIKKLXFKYRGLNQSRNAQSKPKLRVILHV 120
Query: 116 ---------IAQSIAQQLERRVVFRRAM---KRAV------QSAMRFGADGVKVIASGRL 157
IA + + LE+R+ ++ K+ + + A+R A + +S L
Sbjct: 121 IRCQTGASSIADFLVENLEKRIPYKIXFVLLKKHLKKIRQRERALRSSAVSTSIDSSPGL 180
Query: 158 NGAELSRTECYLEGRVPLQTLRA 180
+ S E G V + +
Sbjct: 181 GASGGSVFEQDRTGSVNGASFNS 203
>gi|57641471|ref|YP_183949.1| 30S ribosomal protein S3P [Thermococcus kodakarensis KOD1]
gi|73918002|sp|Q5JDH5|RS3_PYRKO RecName: Full=30S ribosomal protein S3P
gi|57159795|dbj|BAD85725.1| SSU ribosomal protein S3P [Thermococcus kodakarensis KOD1]
Length = 209
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 55/179 (30%), Positives = 95/179 (53%), Gaps = 10/179 (5%)
Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-S 97
I E+L+ L++AG + I++T ++ +++A PG +IG+ G I ++ + L
Sbjct: 17 IDEFLEKELRRAGYGGLDIKKTPLGTKVTIFAANPGYVIGRGGRRIRELTRILEKQFGLE 76
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ V E+ P +NA + A +AQ LER + FRRA A+++ MR GA GV++ SG+L
Sbjct: 77 NPQIEVEEIKNPYLNAKVQAVRLAQALERGIHFRRAAYSAIRAIMRNGARGVEIRLSGKL 136
Query: 158 NGAELSRTECYLEGRV-----PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
G E +++ + +G + P +TL + G A A+ G G+KV + D
Sbjct: 137 TG-ERAKSVRFYQGYLAKVGNPAETL---VSRGYAQAQLKLGVIGVKVSIMPPDAKLPD 191
>gi|302748555|gb|ADL63758.1| ribosomal protein S3 [Arbutus canariensis]
Length = 481
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 54/178 (30%), Positives = 92/178 (51%), Gaps = 6/178 (3%)
Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90
LL +D K+ E ++ + G+ ++ I+ II+ + R +++K+R
Sbjct: 302 NLLGKD-KVMELIEKLIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSL 359
Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGA 146
LSN TN++ + ++ +A+LIAQ I+ QL + FR + V+ M+ G
Sbjct: 360 LSNRTNTKTLIESVKIKSVYQSASLIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGV 419
Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
+G+++ SGRL GAE++RTEC G+ IDY +A T YG G+KV++S
Sbjct: 420 EGIRICCSGRLEGAEIARTECGKYGKTSCNVFNQKIDYASAEVSTRYGILGVKVWISY 477
>gi|161528312|ref|YP_001582138.1| 30S ribosomal protein S3 [Nitrosopumilus maritimus SCM1]
gi|160339613|gb|ABX12700.1| ribosomal protein S3 [Nitrosopumilus maritimus SCM1]
Length = 251
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 54/202 (26%), Positives = 97/202 (48%), Gaps = 9/202 (4%)
Query: 26 GSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIE 85
Y +L +D YL+ +K+AG + I +T R+ ++ RPG++IG+KG+ I
Sbjct: 9 KDNYNMMLLKD-----YLRDAIKEAGFSHAEISKTPTGTRVALHVTRPGIVIGRKGSGIR 63
Query: 86 K-IRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRF 144
K ++ +SV E+ KPE++ +++ +A LER FRRA ++ M
Sbjct: 64 DLTDKLATDFGLKNPQISVVEIEKPELSPSVMCNRMASHLERGTAFRRATMWTLKQIMEN 123
Query: 145 GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAE--TAYGSCGIKVYV 202
GA GV++ SG+L G + S E + G +P A + +A TA G GI++ +
Sbjct: 124 GAMGVQITISGKLRG-DRSAFEKHTAGILPRAGHHAEVIVAEDIAHVGTAMGLIGIRIRI 182
Query: 203 SLRDEVSDSDSTIPAAEHRVVE 224
+ +++ + +
Sbjct: 183 ARKEKFVPEFEMKAEKPKKAKQ 204
>gi|56181292|gb|AAV83740.1| ribosomal protein S3 [Halimeda incrassata]
gi|56181296|gb|AAV83742.1| ribosomal protein S3 [Halimeda incrassata]
gi|56181314|gb|AAV83751.1| ribosomal protein S3 [Halimeda incrassata]
Length = 251
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 45/193 (23%), Positives = 85/193 (44%), Gaps = 21/193 (10%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60
Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMT----------NSEIHLSVNEVPKP 109
+N I++ +P ++IGKKG +++K+ + + + ++ L V +
Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRASEGQSKPKLFLEVYVIRCQ 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAM-------KRAVQSAMRFGADGVKVIASGRLNGAEL 162
+++ A + + LE+R+ ++ K+ Q + G +A+ +
Sbjct: 121 TGASSI-ADFLVENLEKRIPYKIVFVLLKKHLKKIRQREKALRSSGANAVAAQPSDRTAR 179
Query: 163 SRT--ECYLEGRV 173
+ E E V
Sbjct: 180 THMGPETISERSV 192
>gi|291147676|gb|ACB20494.2| ribosomal protein S3 [Carica papaya]
Length = 550
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 53/171 (30%), Positives = 87/171 (50%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ L+ G + LI+ II+ ++ ++K+R LSN TN+
Sbjct: 380 KVMELIEK-LRNLGRIEELIKGIEMMIEIILRKSKIPYRYNSYLNKVKKMRSLLSNRTNT 438
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRA---MKRAVQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL +R FR + + +Q M+ G +G+++
Sbjct: 439 NTLIESVKIKSVYQSASPIAQDISFQLRNKRRSFRSIFSQIMKNIQLVMKKGVEGIRICC 498
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+V IDY A T YG G+KV++S
Sbjct: 499 SGRLKGAEIARTECGKYGKVSRNVFNQKIDYAPAEVSTRYGILGVKVWISY 549
Score = 48.5 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 39/101 (38%), Gaps = 9/101 (8%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54
M +K NPI RL +N + +S WF+ YG +++D+ +R Y + +
Sbjct: 1 MARKGNPISVRLDLNRSSDSSWFSDYY-YGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGR 59
Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95
+I K R ++ P K + K+
Sbjct: 60 CIILHFPK--RTFIHFFLPRRPRRLKRRKKTRPGKEKGRWW 98
>gi|257053365|ref|YP_003131198.1| 30S ribosomal protein S3P [Halorhabdus utahensis DSM 12940]
gi|256692128|gb|ACV12465.1| ribosomal protein S3 [Halorhabdus utahensis DSM 12940]
Length = 326
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 53/181 (29%), Positives = 91/181 (50%), Gaps = 4/181 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN- 96
+I E+ + L +AG + + +T +I++ + +PG++IGK G +I KI L
Sbjct: 16 QIDEFFEDELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGKNIRKITTTLEEEFGL 75
Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156
+ + V EV +P++NA ++A +A LER FR+A + M GA G +++ SG+
Sbjct: 76 EDPQVDVQEVEEPDLNARIVADRLANALERGWYFRKAGHTTIDRIMESGAKGAEIVLSGK 135
Query: 157 LNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
+ GA SR E + G + A +D+G VA G+ G+ V + + D
Sbjct: 136 VTGA-RSRVEKFNRGYIKHNGEPAEDIVDHGQGVAVMKLGTIGVDVKIIPPNAELPDDFE 194
Query: 215 I 215
I
Sbjct: 195 I 195
>gi|224020972|ref|YP_002608205.1| ribosomal protein S3 [Carica papaya]
Length = 550
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 53/171 (30%), Positives = 87/171 (50%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ L+ G + LI+ II+ ++ ++K+R LSN TN+
Sbjct: 380 KVMELIEK-LRNLGRIEELIKGIEMMIEIILRKSKIPYRYNSYLNKVKKMRSLLSNRTNT 438
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRA---MKRAVQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL +R FR + + +Q M+ G +G+++
Sbjct: 439 NTLIESVKIKSVYQSASPIAQDISFQLRNKRRSFRSIFSQIMKNIQLVMKKGVEGIRICC 498
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+V IDY A T YG G+KV++S
Sbjct: 499 SGRLKGAEIARTECGKYGKVSRNVFNQKIDYAPAEVSTRYGILGVKVWISY 549
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 39/101 (38%), Gaps = 9/101 (8%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54
M +K NPI RL +N + +S WF+ YG +++D+ +R Y + +
Sbjct: 1 MARKGNPISVRLDLNRSSDSSWFSEYY-YGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGR 59
Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95
+I K R ++ P K + K+
Sbjct: 60 CIILHFPK--RTFIHFFLPRRPRRLKRRKKTRPGKEKGRWW 98
>gi|56181328|gb|AAV83758.1| ribosomal protein S3 [Halimeda melanesica]
Length = 209
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 40/161 (24%), Positives = 77/161 (47%), Gaps = 17/161 (10%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKNYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATL-- 115
+ I++ + +P ++IGKKG +++ +K++ + + + KP++ L
Sbjct: 61 IEDHIEIVIRAQKPEILIGKKGENLKNFQKEIKKLIFKYRGFSSNQDAQTKPKLKVILYV 120
Query: 116 ---------IAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144
IA + + LE+R+ ++ K+ ++ +
Sbjct: 121 IRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 161
>gi|56181290|gb|AAV83739.1| ribosomal protein S3 [Halimeda incrassata]
gi|56181294|gb|AAV83741.1| ribosomal protein S3 [Halimeda incrassata]
gi|56181316|gb|AAV83752.1| ribosomal protein S3 [Halimeda incrassata]
gi|56181318|gb|AAV83753.1| ribosomal protein S3 [Halimeda incrassata]
Length = 251
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 45/193 (23%), Positives = 85/193 (44%), Gaps = 21/193 (10%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60
Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMT----------NSEIHLSVNEVPKP 109
+N I++ +P ++IGKKG +++K+ + + + ++ L V +
Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRASEGQSKPKLFLEVYVIRCQ 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAM-------KRAVQSAMRFGADGVKVIASGRLNGAEL 162
+++ A + + LE+R+ ++ K+ Q + G +A+ +
Sbjct: 121 TGASSI-ADFLVENLEKRIPYKIVFVLLKKHLKKIRQREKALRSSGANAVAAQPSDRTAR 179
Query: 163 SRT--ECYLEGRV 173
+ E E V
Sbjct: 180 THMGPETISERSV 192
>gi|223927288|gb|ACN23257.1| ribosomal protein S3 [Halimeda heteromorpha]
Length = 234
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 43/177 (24%), Positives = 82/177 (46%), Gaps = 17/177 (9%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y L ED +R L +AG I I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKKYAKAGFENIKISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATL-- 115
+ I++ + +P ++IGKKG +++ +K++ + ++ S N KP++ L
Sbjct: 61 IENHIEIVIRAQKPEILIGKKGENLKNFQKEIKKLIFKYRGLNQSRNAQSKPKLRVILHV 120
Query: 116 ---------IAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASGRLNGA 160
IA + + LE+R+ ++ K+ ++ + S ++ +
Sbjct: 121 IRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQRERALRSSAVSTSIDSS 177
>gi|223927771|gb|ACN23502.1| ribosomal protein S3 [Halimeda cuneata]
Length = 166
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 11/166 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L +A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYVLEDHFVRTLLSQKYNRARFEKIHISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111
+ I++++ +P L+IGKKG ++E +K++ NS + + +
Sbjct: 61 IEDHLEIVIHAQKPDLLIGKKGENLEIFQKQIKKFIFQYRQIEWNSTLKVILYIFRCKTS 120
Query: 112 NATLIAQSIAQQLERRVVFRRAM--KRAVQSAMRFGADGVKVIASG 155
++ IA I + LE+RV ++ + + G+K+ SG
Sbjct: 121 ASSAIADFIVEHLEKRVPYKVVFTLLKKHLKRKKQSILGMKIQISG 166
>gi|56181258|gb|AAV83723.1| ribosomal protein S3 [Halimeda incrassata]
gi|56181260|gb|AAV83724.1| ribosomal protein S3 [Halimeda incrassata]
gi|56181266|gb|AAV83727.1| ribosomal protein S3 [Halimeda incrassata]
gi|56181270|gb|AAV83729.1| ribosomal protein S3 [Halimeda incrassata]
gi|56181272|gb|AAV83730.1| ribosomal protein S3 [Halimeda incrassata]
Length = 233
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 43/177 (24%), Positives = 82/177 (46%), Gaps = 17/177 (9%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y L ED +R L +AG I I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKKYAKAGFENIKISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATL-- 115
+ I++ + +P ++IGKKG +++ +K++ + ++ S N KP++ L
Sbjct: 61 IENHIEIVIRAQKPEILIGKKGENLKNFQKEIKKLIFKYRGLNQSRNAQSKPKLRVILHV 120
Query: 116 ---------IAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASGRLNGA 160
IA + + LE+R+ ++ K+ ++ + S ++ +
Sbjct: 121 IRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQRERALRSSAVSTSIDSS 177
>gi|108773037|ref|YP_635947.1| ribosomal protein S3 [Scenedesmus obliquus]
gi|122231594|sp|Q1KVX7|RR3_SCEOB RecName: Full=30S ribosomal protein S3, chloroplastic
gi|88696603|gb|ABD48229.1| ribosomal protein S3 [Scenedesmus obliquus]
Length = 700
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 8/166 (4%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIH 100
E L+ + + + K ++ + + K+ T EK + + I
Sbjct: 523 EILKNKVSKTFFKISQKNASQKKNFQDIFVEQ----LQKQRTICEKNIQLTPKI---SIQ 575
Query: 101 LSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ-SAMRFGADGVKVIASGRLNG 159
+ + A+ +A SI LE+R FR +K+A + GVK+ SGRLNG
Sbjct: 576 FYSVKAQDFQTRASAVADSIVDDLEKRKAFRGVIKKAKEDLMRTPKVKGVKIQVSGRLNG 635
Query: 160 AELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
AE++R+E GRVPLQTLRA+IDY A+T YG G+KV++
Sbjct: 636 AEIARSEWVRAGRVPLQTLRANIDYCYKTAQTIYGIIGVKVWIYKG 681
Score = 69.6 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 45/114 (39%), Gaps = 4/114 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFA--RGSEYGALLHEDLKIREYLQCHLKQAGVAKILIE 58
MGQKI+P+ FR+G+ S WFA +Y + ED +R+ L L Q K+
Sbjct: 1 MGQKIHPLGFRVGITKKHQSVWFARFHKHQYAQSVLEDRFLRKNLLKLLPQLFQKKLNN- 59
Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEIN 112
+ +I GLI + G I + + + N V N
Sbjct: 60 -SPNMPKISHIQIVRGLIPYEIGIQIHAQNCHMIKSAFEGLEVQPNFVHNLLKN 112
>gi|116755010|ref|YP_844128.1| 30S ribosomal protein S3P [Methanosaeta thermophila PT]
gi|121694870|sp|A0B9W4|RS3_METTP RecName: Full=30S ribosomal protein S3P
gi|116666461|gb|ABK15488.1| SSU ribosomal protein S3P [Methanosaeta thermophila PT]
Length = 276
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 58/180 (32%), Positives = 90/180 (50%), Gaps = 4/180 (2%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEI 99
EYL L +AG +++ RT +I VY+ +PG++IGK G I K+ + L
Sbjct: 19 EYLAKELDRAGYGGMVMNRTPMGTQITVYAEKPGMVIGKGGKLIRKLTRDLERRFRLDNP 78
Query: 100 HLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNG 159
+ V +V K ++NA ++A +A LE FR+A + ++ M GA G +++ SG+L G
Sbjct: 79 QIDVQDVGKSDLNARVVANRLASSLEHGWYFRKAGQSMLRRVMDSGALGCEIVISGKLTG 138
Query: 160 AELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
SR E +L G + A +D G AVA G+ G +V + V D I A
Sbjct: 139 P-RSRVEKFLAGYIKHSGKPAEEIVDTGYAVAVKKLGAIGCQVRIVPPGAVLPDDFQINA 197
>gi|56181298|gb|AAV83743.1| ribosomal protein S3 [Halimeda incrassata]
Length = 258
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 77/158 (48%), Gaps = 15/158 (9%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60
Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMT----------NSEIHLSVNEVPKP 109
+N I++ +P ++IGKKG +++K+ + + + ++ L V +
Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRASERQSKPKLFLEVYVIRCQ 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144
+++ A + + LE+R+ ++ K+ ++ +
Sbjct: 121 TGASSI-ADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 157
>gi|239995007|ref|ZP_04715531.1| 30S ribosomal protein S3 [Alteromonas macleodii ATCC 27126]
Length = 93
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 40/89 (44%), Positives = 56/89 (62%), Gaps = 3/89 (3%)
Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVY 201
MR GA G+KV SGRL GAE++R+E Y EGRVPL T RA IDY T+ A T YG G+KV+
Sbjct: 1 MRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTFRADIDYATSEASTTYGIIGVKVW 60
Query: 202 VSLRDEVSD---SDSTIPAAEHRVVEKDS 227
+ + + + PAA+ + +++
Sbjct: 61 IFKGEVLGGLPTTQEQAPAAQPKKKGRNA 89
>gi|56181288|gb|AAV83738.1| ribosomal protein S3 [Halimeda incrassata]
gi|56181322|gb|AAV83755.1| ribosomal protein S3 [Halimeda incrassata]
Length = 258
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 77/158 (48%), Gaps = 15/158 (9%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60
Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMT----------NSEIHLSVNEVPKP 109
+N I++ +P ++IGKKG +++K+ + + + ++ L V +
Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRASERQSKPKLFLEVYVIRCQ 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144
+++ A + + LE+R+ ++ K+ ++ +
Sbjct: 121 TGASSI-ADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 157
>gi|56181278|gb|AAV83733.1| ribosomal protein S3 [Halimeda incrassata]
Length = 233
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 43/177 (24%), Positives = 82/177 (46%), Gaps = 17/177 (9%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y L ED +R L +AG I I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKKYAKAGFENIKISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATL-- 115
+ I++ + +P ++IGKKG +++ +K++ + ++ S N KP++ L
Sbjct: 61 IENHIEIVIRAQKPEILIGKKGENLKNFQKEIKKLIFKYRGLNQSRNAQSKPKLRVILHV 120
Query: 116 ---------IAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASGRLNGA 160
IA + + LE+R+ ++ K+ ++ + S ++ +
Sbjct: 121 IRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQRERALRSSAVSTSIDSS 177
>gi|240104054|ref|YP_002960363.1| 30S ribosomal protein S3P [Thermococcus gammatolerans EJ3]
gi|259495259|sp|C5A280|RS3_THEGJ RecName: Full=30S ribosomal protein S3P
gi|239911608|gb|ACS34499.1| SSU ribosomal protein S3P (rps3P) [Thermococcus gammatolerans EJ3]
Length = 209
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 58/179 (32%), Positives = 95/179 (53%), Gaps = 10/179 (5%)
Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-S 97
I EYL+ L++AG I I++T ++I+++A PG +IG+ G I ++ + L
Sbjct: 17 IDEYLEKELRRAGYGGIDIKKTPLGTKVIIFAASPGYVIGRGGRRIRELTRILERQFGLE 76
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ V E+ P +NA + A +AQ LER + FRRA A+++ MR GA GV++ SG+L
Sbjct: 77 NPQIEVEEIKNPYLNAKVQAVRLAQALERGIHFRRAAYSAIRAIMRNGARGVEIRLSGKL 136
Query: 158 NGAELSRTECYLEGRV-----PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
G E +++ + +G + P +TL + G A A G G+KV + D
Sbjct: 137 TG-ERAKSVRFYQGYLAKVGNPAETLVSK---GYAQALLKLGVIGVKVAIMPPDARLPD 191
>gi|11466512|ref|NP_044761.1| ribosomal protein S3 [Reclinomonas americana]
gi|2258342|gb|AAD11876.1| ribosomal protein S3 [Reclinomonas americana]
Length = 287
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 65/275 (23%), Positives = 116/275 (42%), Gaps = 72/275 (26%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQ--CHLKQAGVAKILIE 58
MGQK+NPI R+GVN W+SRW + +YG L +DL IR +++ C ++ + K+ I
Sbjct: 1 MGQKVNPISLRIGVNQMWDSRW-SHDKKYGKYLEQDLLIRSFIEDLCGYQEIFIGKLSIW 59
Query: 59 RTHKNCRIIV-----YSARPGLIIGKKGTDIEKIR-------KKLSNMTNSEIHLSVNEV 106
R+ + V + +P L I + K ++ + + I+ + +
Sbjct: 60 RSCSMNSLTVNLTDTNTVKPNLFIYFQMYVPYKTYSTNKEQKQEWLSNLENTIYNYLEDR 119
Query: 107 PKPEINATL-----------------------------------------IAQSIAQQLE 125
+ N +L I+Q IA + +
Sbjct: 120 FRNTFNISLLIDPIFEENSGDSKRSKQKTEIDFTFNNDVIKWLLNKDCLMISQWIANEFQ 179
Query: 126 RRVVFR---RAMKRAVQSAM------RFGADGVKVIASGRLNGAE-------LSRTECYL 169
+R + R +++ ++ DG+K+ SGR + ++R + +
Sbjct: 180 KRKGLKEVCRIIEKCFDHIKTEAIDLKYRIDGIKITCSGRFKMTDNEKRRNKMARIKTFK 239
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
+G++PLQTL HI+Y A A T G+ GIKV++S
Sbjct: 240 KGQIPLQTLSKHINYHLATAYTPDGTSGIKVWISY 274
>gi|288931516|ref|YP_003435576.1| ribosomal protein S3 [Ferroglobus placidus DSM 10642]
gi|288893764|gb|ADC65301.1| ribosomal protein S3 [Ferroglobus placidus DSM 10642]
Length = 223
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 57/201 (28%), Positives = 99/201 (49%), Gaps = 9/201 (4%)
Query: 32 LLHED----LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKI 87
ED L ++E++ ++ AG + I RT ++ ++ RPGL+IG+ G I+ +
Sbjct: 6 KFIEDKVKKLMVKEWIVEEVRNAGFGGLDIVRTPLGTQVTLFVERPGLVIGRGGRRIKAL 65
Query: 88 RKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGAD 147
+KL +SV+E+ KPE NA L+A +A+ LER FR+A R + M GA
Sbjct: 66 TEKLKEFGLDNPQISVDEIDKPEFNAQLMASLLARALERGWYFRKAGYRFLYRIMEAGAK 125
Query: 148 GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHI---DYGTAVAETAYGSCGIKVYVSL 204
G ++ SG+L +E +RTE ++ G + + T I G +A G G++V +
Sbjct: 126 GCEIEISGKLT-SERARTEKFIAGTI-IHTGDPAITCVREGFDIAIKKLGVYGVRVRIIP 183
Query: 205 RDEVSDSDSTIPAAEHRVVEK 225
D + + +++
Sbjct: 184 PDAELPDEFVVKDVPVEQLKE 204
>gi|223927294|gb|ACN23260.1| ribosomal protein S3 [Halimeda heteromorpha]
Length = 235
Score = 112 bits (280), Expect = 5e-23, Method: Composition-based stats.
Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 23/196 (11%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y L ED +R L +AG I I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKKYAKAGFENIKISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATL-- 115
+ I++ + +P ++IGKKG +++ +K++ + ++ S N KP++ L
Sbjct: 61 IENHIEIVIRAQKPEILIGKKGENLKNFQKEIKKLIFKYRGLNQSRNAQSKPKLRVILHV 120
Query: 116 ---------IAQSIAQQLERRVVFRRAM---KRAV------QSAMRFGADGVKVIASGRL 157
IA + + LE+R+ ++ K+ + + A+R A + + +S L
Sbjct: 121 IRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQRERALRSSAVSISIDSSPGL 180
Query: 158 NGAELSRTECYLEGRV 173
+ S E G V
Sbjct: 181 GASGGSVFEQDRTGSV 196
>gi|56181246|gb|AAV83717.1| ribosomal protein S3 [Halimeda borneensis]
gi|56181248|gb|AAV83718.1| ribosomal protein S3 [Halimeda borneensis]
gi|56181250|gb|AAV83719.1| ribosomal protein S3 [Halimeda borneensis]
Length = 230
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 19/163 (11%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATL---- 115
+ I++ + +P ++IGKKG +++ +K++ + S N+ + L
Sbjct: 61 IEDHIEIVIRAQKPEILIGKKGENLKNFQKEIKKLIFKYRGFSSNKSRDVQSKQKLKVIL 120
Query: 116 -----------IAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144
IA + + LE+R+ ++ K+ ++ +
Sbjct: 121 YVIRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 163
>gi|329765063|ref|ZP_08256647.1| ribosomal protein S3 [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329138440|gb|EGG42692.1| ribosomal protein S3 [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 251
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 56/202 (27%), Positives = 97/202 (48%), Gaps = 9/202 (4%)
Query: 26 GSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIE 85
Y +L +D YL+ +K AG + I +T R+ ++ RPG++IG+KG+ I
Sbjct: 9 KDNYNMMLLKD-----YLRVAIKDAGFSHAEISKTPTGTRVALHVTRPGIVIGRKGSGIR 63
Query: 86 K-IRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRF 144
+ K ++ +SV E+ KPE++ +++ +A LER FRRA ++ M
Sbjct: 64 ELTDKLATDFGLKNPQISVVEIDKPELSPSVMCNRMAAHLERGTAFRRATMWTLKQIMEN 123
Query: 145 GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYV 202
GA GV++ SG+L G + S E + G +P A +D A ETA G GI++ +
Sbjct: 124 GAMGVQITISGKLRG-DRSAFEKHTAGILPRAGHHAEVIVDEDIAHVETAMGLIGIRIRI 182
Query: 203 SLRDEVSDSDSTIPAAEHRVVE 224
+ ++ + +
Sbjct: 183 ARNEKYVPEFELKTQKPKKAKQ 204
>gi|56180940|gb|AAV83572.1| ribosomal protein S3 [Halimeda discoidea]
gi|56180943|gb|AAV83574.1| ribosomal protein S3 [Halimeda discoidea]
gi|56180946|gb|AAV83576.1| ribosomal protein S3 [Halimeda discoidea]
gi|56180979|gb|AAV83598.1| ribosomal protein S3 [Halimeda discoidea]
gi|71057449|emb|CAJ18167.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927821|gb|ACN23534.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927824|gb|ACN23536.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927827|gb|ACN23538.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927830|gb|ACN23540.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927833|gb|ACN23542.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927842|gb|ACN23548.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927845|gb|ACN23550.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927848|gb|ACN23552.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927851|gb|ACN23554.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927854|gb|ACN23556.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927857|gb|ACN23558.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927860|gb|ACN23560.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927872|gb|ACN23568.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927875|gb|ACN23570.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927878|gb|ACN23572.1| ribosomal protein S3 [Halimeda discoidea]
Length = 166
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 42/166 (25%), Positives = 80/166 (48%), Gaps = 11/166 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S W+A +Y + ED +R L +A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKDYSKYVLEDNFVRTLLSKKYNRARFEKIQISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111
+ I++++ +P ++IG+KG ++E +K++ NS++ + +
Sbjct: 61 IEDHLEIVIHAQKPDILIGRKGENLEIFQKQIKTFIFQYRQIEWNSKLKVILYIFRCKTS 120
Query: 112 NATLIAQSIAQQLERRVVFRRAM--KRAVQSAMRFGADGVKVIASG 155
++ IA I + LE+R+ ++ + + G+K+ SG
Sbjct: 121 ASSAIADFIVEHLEKRIPYKVVFTLLKKHLKRKKQSTLGMKIQISG 166
>gi|254172991|ref|ZP_04879665.1| ribosomal protein S3 [Thermococcus sp. AM4]
gi|214033147|gb|EEB73975.1| ribosomal protein S3 [Thermococcus sp. AM4]
Length = 209
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 57/179 (31%), Positives = 95/179 (53%), Gaps = 10/179 (5%)
Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-S 97
I EYL+ L++AG I I++T ++I+++A PG +IG+ G I ++ + L
Sbjct: 17 IDEYLEKELRRAGYGGIDIKKTPLGTKVIIFAASPGYVIGRGGRRIRELTRILERQFGLE 76
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ V E+ P +NA + A +AQ LER + FRRA A+++ MR GA GV++ SG+L
Sbjct: 77 NPQIEVEEIKNPYLNAKVQAVRLAQALERGIHFRRAAYSAIRAIMRNGARGVEIRLSGKL 136
Query: 158 NGAELSRTECYLEGRV-----PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
G E +++ + +G + P +TL + G A A G G+KV + +
Sbjct: 137 TG-ERAKSVRFYQGYLAKVGNPAETLVSK---GYAQALLKLGVIGVKVAIMPPEARLPD 191
>gi|56180961|gb|AAV83586.1| ribosomal protein S3 [Halimeda cuneata]
gi|56180964|gb|AAV83588.1| ribosomal protein S3 [Halimeda cuneata]
gi|56180967|gb|AAV83590.1| ribosomal protein S3 [Halimeda cuneata]
gi|223927732|gb|ACN23476.1| ribosomal protein S3 [Halimeda cuneata]
gi|223927735|gb|ACN23478.1| ribosomal protein S3 [Halimeda cuneata]
Length = 165
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 47/166 (28%), Positives = 88/166 (53%), Gaps = 12/166 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A +Y + ED +R L K+A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKRDYSKYVLEDNFVRTLLSKKYKRAKFEKIHISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN--MTNSEIHLS-----VNEVPKPEIN 112
+ I++++ +P ++IGKK +++ ++++ +I + + + + +IN
Sbjct: 61 IEDHLEIVIHAQKPDILIGKKSENLQTFQQQIKKAIFQYRQIAWNSQLKVIFYIFRCKIN 120
Query: 113 ATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155
A+ IA I + LE+RV ++ K+ +Q R+ G+K+ SG
Sbjct: 121 ASSIADFIVEHLEKRVPYKVVFVLLKKHLQR-QRYSPLGMKIQISG 165
>gi|56180949|gb|AAV83578.1| ribosomal protein S3 [Halimeda cuneata]
gi|56180952|gb|AAV83580.1| ribosomal protein S3 [Halimeda cuneata]
gi|56180955|gb|AAV83582.1| ribosomal protein S3 [Halimeda cuneata]
gi|56180958|gb|AAV83584.1| ribosomal protein S3 [Halimeda cuneata]
gi|71057443|emb|CAJ18157.1| ribosomal protein S3 [Halimeda cuneata]
gi|71057446|emb|CAJ18162.1| ribosomal protein S3 [Halimeda cuneata]
gi|223927753|gb|ACN23490.1| ribosomal protein S3 [Halimeda cuneata]
gi|223927756|gb|ACN23492.1| ribosomal protein S3 [Halimeda cuneata]
gi|223927762|gb|ACN23496.1| ribosomal protein S3 [Halimeda cuneata]
gi|223927765|gb|ACN23498.1| ribosomal protein S3 [Halimeda cuneata]
gi|223927768|gb|ACN23500.1| ribosomal protein S3 [Halimeda cuneata]
Length = 166
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 11/166 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L +A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYVLEDHFVRTLLSQKYNRARFEKIHISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111
+ I++++ +P L+IGKKG ++E +K++ NS + + +
Sbjct: 61 IEDHLEIVIHAQKPDLLIGKKGENLEIFQKQIKKFIFQYRQIEWNSRLKVILYIFRCKTS 120
Query: 112 NATLIAQSIAQQLERRVVFRRAM--KRAVQSAMRFGADGVKVIASG 155
++ IA I + LE+RV ++ + + G+K+ SG
Sbjct: 121 ASSAIADFIVEHLEKRVPYKVVFTLLKKHLKRKKQSILGMKIQISG 166
>gi|219851113|ref|YP_002465545.1| 30S ribosomal protein S3P [Methanosphaerula palustris E1-9c]
gi|219545372|gb|ACL15822.1| ribosomal protein S3 [Methanosphaerula palustris E1-9c]
Length = 234
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 53/194 (27%), Positives = 95/194 (48%), Gaps = 6/194 (3%)
Query: 38 KIR--EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95
K+R +L LK+AG + I RT ++ +Y+ +PG++IGK G + ++ + L+
Sbjct: 14 KVRVERFLLRDLKRAGYGGMDIARTPLGTQVTIYAEKPGIVIGKGGKVVRQLTQDLATTY 73
Query: 96 N-SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIAS 154
+ V +V P NA ++A+ +A LER FR+A V+ M GA G +V+ S
Sbjct: 74 GIESPQIEVQQVQNPNYNAQIMAERLANALERGWYFRKAGSNVVRRVMESGALGCEVVLS 133
Query: 155 GRLNGAELSRTECYLEGRVPLQTLRA--HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
G+L GA +R + + EG + + ++ G A+A G+ G++V + D
Sbjct: 134 GKLTGA-RARVQKFTEGYIKHSGEPSITIVEKGYAIAIKKLGTIGVQVKIIPPDAKLPDQ 192
Query: 213 STIPAAEHRVVEKD 226
I + + +
Sbjct: 193 FEILDVKKPEIPAE 206
>gi|290454848|emb|CBH29631.1| ribosomal protein S3 [Alder yellows phytoplasma]
gi|290454851|emb|CBH29633.1| ribosomal protein S3 [Alder yellows phytoplasma]
gi|290454857|emb|CBH29637.1| ribosomal protein S3 [Rubus stunt phytoplasma]
gi|290454860|emb|CBH29639.1| ribosomal protein S3 [Candidatus Phytoplasma vitis]
Length = 147
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 46/145 (31%), Positives = 83/145 (57%), Gaps = 4/145 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+
Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSA 141
AQ+IA QL++R ++ +K A+Q A
Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKA 145
>gi|223928018|gb|ACN23664.1| ribosomal protein S3 [Halimeda cf. cuneata JH12]
Length = 158
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S W+A Y + ED +R L +A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKYYSKYVLEDNFVRTLLSEKYSRARFEKIQISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
+ I++Y+ +P ++IG + I + NS++ + + ++ IA
Sbjct: 61 VEDHLEIVIYAQKPDILIGVQKHIKTSIFQYRQIDWNSKLKVILYIFQCKPSASSAIADF 120
Query: 120 IAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155
I + LE+R+ ++ K+ ++ + G+K+ SG
Sbjct: 121 IVEHLEKRIPYKVVFNLLKKHLKRTKQS-TLGMKIQISG 158
>gi|295311706|ref|YP_003587365.1| ribosomal protein S3 [Cucurbita pepo]
gi|259156834|gb|ACV96695.1| ribosomal protein S3 [Cucurbita pepo]
Length = 565
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 52/182 (28%), Positives = 90/182 (49%), Gaps = 6/182 (3%)
Query: 34 HEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN 93
ED I E ++ + G+ ++ I+ II+ + R +++K+R LSN
Sbjct: 378 KEDKVI-ELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVQKMRSLLSN 435
Query: 94 MTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGV 149
T + + ++ +A+LIAQ I+ QL + FR + V+ M+ G +G+
Sbjct: 436 RTKTNTLIESVKIQSVYQSASLIAQDISFQLRNKTRSFRSIFTKIVKDIPFGMKKGVEGI 495
Query: 150 KVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVS 209
++ SGRL GAE++RTEC G+ IDY +A T YG G+KV++S + +
Sbjct: 496 RICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYASAEVSTRYGILGVKVWISYKKQKK 555
Query: 210 DS 211
+
Sbjct: 556 ER 557
Score = 54.6 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 39/101 (38%), Gaps = 9/101 (8%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54
M +K NPI RL +N + +S WF+ YG LL++D+ +R Y + +
Sbjct: 1 MARKGNPISVRLDLNRSSDSSWFSDYY-YGKLLYQDVNLRSYFGSIRPPTRLTFGFRLGR 59
Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95
+I K ++ P G K K K
Sbjct: 60 CIILHFPKIT--FIHFFLPRRPRGLKRRAKSKPGKDQGRWW 98
>gi|302748633|gb|ADL63797.1| ribosomal protein S3 [Celtis yunnanensis]
Length = 488
Score = 112 bits (279), Expect = 6e-23, Method: Composition-based stats.
Identities = 50/167 (29%), Positives = 85/167 (50%), Gaps = 4/167 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 323 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 381
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSA---MRFGADGVKVIAS 154
+ ++ +A+LIAQ I+ QL + FR + V+ M+ G +G+++ S
Sbjct: 382 NTLIESVKIKSVYQSASLIAQDISFQLRNKTSFRSIFSKIVKDIPLVMKKGVEGIRICCS 441
Query: 155 GRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVY 201
GRL GAE++RTEC G+ IDY +A T YG G+KV+
Sbjct: 442 GRLEGAEIARTECGKYGKTSRNVFNQKIDYASAEVSTRYGILGVKVW 488
>gi|56181264|gb|AAV83726.1| ribosomal protein S3 [Halimeda incrassata]
Length = 230
Score = 112 bits (279), Expect = 6e-23, Method: Composition-based stats.
Identities = 43/177 (24%), Positives = 82/177 (46%), Gaps = 17/177 (9%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y L ED +R L +AG I I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKKYAKAGFENIKISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATL-- 115
+ I++ + +P ++IGKKG +++ +K++ + ++ S N KP++ L
Sbjct: 61 IENHIEIVIRAQKPEILIGKKGENLKNFQKEIKKLIFKYRGLNQSRNAQSKPKLRVILHV 120
Query: 116 ---------IAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASGRLNGA 160
IA + + LE+R+ ++ K+ ++ + S ++ +
Sbjct: 121 IRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQRERALRSSAVSTSIDSS 177
>gi|330508492|ref|YP_004384920.1| 30S ribosomal protein S3P [Methanosaeta concilii GP-6]
gi|328929300|gb|AEB69102.1| ribosomal protein S3P [Methanosaeta concilii GP-6]
Length = 278
Score = 112 bits (279), Expect = 6e-23, Method: Composition-based stats.
Identities = 56/180 (31%), Positives = 91/180 (50%), Gaps = 4/180 (2%)
Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-S 97
+ EYL L++AG + + RT +I VY+ +PG++IGK G I KI + L +
Sbjct: 17 VNEYLADELERAGYGGMQMNRTPMGTQITVYAEKPGMVIGKGGKLIRKITRDLDRRFHLD 76
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ V +V + ++N ++A +A LER FR+A + ++ M GA G +++ SG+L
Sbjct: 77 NPQIDVQDVGRGDLNGRVVANRLASSLERGWYFRKAGQSMMRRVMDAGALGCEIVISGKL 136
Query: 158 NGAELSRTECYLEGRVPLQTLRA--HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
G SRTE ++ G + A +D G +VA G G +V + D D I
Sbjct: 137 TGP-RSRTEKFIAGYIKHSGKPAIDLVDRGYSVAVKKLGVIGCQVRIIPPDVRLPDDFQI 195
>gi|268323281|emb|CBH36869.1| putative 30S ribosomal protein S3P [uncultured archaeon]
Length = 234
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 60/196 (30%), Positives = 100/196 (51%), Gaps = 7/196 (3%)
Query: 37 LKIR--EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM 94
K+R EY Q L++AG + I+RT +I V+ +PG+IIGK G I+K+ +++
Sbjct: 12 KKVRMDEYFQKELERAGYGGMDIKRTPMGTQITVHVEKPGMIIGKNGKRIKKVTDEITKK 71
Query: 95 TN-SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIA 153
+ V + PE++A L++ +A+ +ER FRRA + +Q M GA G ++
Sbjct: 72 QELDNPQIDVQPIAAPELSAQLMSNRLAKLIERGWHFRRAGRSTLQRIMGAGALGCEITM 131
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLRDE-VSD 210
SG+L G R E +EG + A +D G ++A+ G G+ V++ D + D
Sbjct: 132 SGKLRGP-RGRVEKMVEGYIKHCGSVAEEIVDKGYSIAQKKTGVIGVMVWIVAPDANIPD 190
Query: 211 SDSTIPAAEHRVVEKD 226
S E VV ++
Sbjct: 191 SFRMNVVKEDVVVNEE 206
>gi|223927836|gb|ACN23544.1| ribosomal protein S3 [Halimeda discoidea]
Length = 166
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 42/166 (25%), Positives = 80/166 (48%), Gaps = 11/166 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S W+A +Y + ED +R L +A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKDYSKYVLEDNFVRTLLSKKYNRARFEKIQISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111
+ I++++ +P ++IG+KG ++E +K++ NS++ + +
Sbjct: 61 IEDHLEIVIHAQKPNILIGRKGENLEIFQKQIKTFIFQYRQIEWNSKLKVILYIFRCKTS 120
Query: 112 NATLIAQSIAQQLERRVVFRRAM--KRAVQSAMRFGADGVKVIASG 155
++ IA I + LE+R+ ++ + + G+K+ SG
Sbjct: 121 ASSAIADFIVEHLEKRIPYKVVFTLLKKHLKRKKQSTLGMKIQISG 166
>gi|223928015|gb|ACN23662.1| ribosomal protein S3 [Halimeda cf. cuneata HV823]
Length = 158
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S W+A Y + ED +R L +A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKYYSKYVLEDNFVRTLLSEKYSRARFEKIQISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
+ I++Y+ +P ++IG + I + NS++ + + ++ IA
Sbjct: 61 VEDHLEIVIYAQKPDILIGVQKHIKTSIFQYRQIEWNSKLKVILYIFQCKPSASSAIADF 120
Query: 120 IAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155
I + LE+R+ ++ K+ ++ + G+K+ SG
Sbjct: 121 IVEHLEKRIPYKVVFNLLKKHLKRTKQS-TLGMKIQISG 158
>gi|223927302|gb|ACN23264.1| ribosomal protein S3 [Halimeda simulans]
Length = 276
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 23/166 (13%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y L ED +R L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKQYAKAGFEKIEISRK 60
Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMT------------------NSEIHL 101
+N I++ +P ++IGKKG +++K+ + + + ++ L
Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRAPKAPAAGELGGQSKPKLFL 120
Query: 102 SVNEVPKPEINATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144
V + +++ A + + LE+R+ ++ K+ ++ +
Sbjct: 121 EVYVIRCQTGASSI-ADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 165
>gi|56181262|gb|AAV83725.1| ribosomal protein S3 [Halimeda incrassata]
Length = 233
Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 51/196 (26%), Positives = 91/196 (46%), Gaps = 23/196 (11%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y L ED +R L +AG I I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKKYAKAGFENIKISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATL-- 115
+ I++ + +P ++IGKKG +++ +K++ + ++ S N KP++ L
Sbjct: 61 IENHIEIVIRAQKPEILIGKKGENLKNFQKEIKKLIFKYRGLNQSRNAQSKPKLRVILHV 120
Query: 116 ---------IAQSIAQQLERRVVFRRAM---KRAV------QSAMRFGADGVKVIASGRL 157
IA + + LE+R+ ++ K+ + + A+R A + + +S L
Sbjct: 121 IRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQRERALRSSAVSISIDSSPGL 180
Query: 158 NGAELSRTECYLEGRV 173
+ S E G V
Sbjct: 181 GASGGSVFEQDRTGSV 196
>gi|290454866|emb|CBH29643.1| ribosomal protein S3 [Candidatus Phytoplasma vitis]
gi|296172308|emb|CBL59885.1| ribosomal protein S3 [Candidatus Phytoplasma vitis]
Length = 147
Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 46/145 (31%), Positives = 83/145 (57%), Gaps = 4/145 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y+++ G+I G + + + K+ + N ++ +++ EV A L+
Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAILV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSA 141
AQ+IA QL++R ++ +K A+Q A
Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKA 145
>gi|223927839|gb|ACN23546.1| ribosomal protein S3 [Halimeda discoidea]
Length = 166
Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 42/166 (25%), Positives = 80/166 (48%), Gaps = 11/166 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S W+A +Y + ED +R L +A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKDYSKYVLEDNFVRTLLSKKYNRARFEKIQISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111
+ I++++ +P ++IG+KG ++E +K++ NS++ + +
Sbjct: 61 IEDHLEIVIHAQKPDILIGRKGENLEIFQKQIKTFIFQYRQIEWNSKLKVILYIFRCKIS 120
Query: 112 NATLIAQSIAQQLERRVVFRRAM--KRAVQSAMRFGADGVKVIASG 155
++ IA I + LE+R+ ++ + + G+K+ SG
Sbjct: 121 ASSAIADFIVEHLEKRIPYKVVFTLLKKHLKRKKQSTLGMKIQISG 166
>gi|56181356|gb|AAV83772.1| ribosomal protein S3 [Halimeda simulans]
Length = 275
Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 23/166 (13%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y L ED +R L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKQYAKAGFEKIEISRK 60
Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMT------------------NSEIHL 101
+N I++ +P ++IGKKG +++K+ + + + ++ L
Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRAPKAPAAGELGGQSKPKLFL 120
Query: 102 SVNEVPKPEINATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144
V + +++ A + + LE+R+ ++ K+ ++ +
Sbjct: 121 EVYVIRCQTGASSI-ADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 165
>gi|302748623|gb|ADL63792.1| ribosomal protein S3 [Carica papaya]
Length = 496
Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 53/171 (30%), Positives = 87/171 (50%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ L+ G + LI+ II+ ++ ++K+R LSN TN+
Sbjct: 326 KVMELIEK-LRNLGRIEELIKGIEMMIEIILRKSKIPYRYNSYLNKVKKMRSLLSNRTNT 384
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRA---MKRAVQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL +R FR + + +Q M+ G +G+++
Sbjct: 385 NTLIESVKIKSVYQSASPIAQDISFQLRNKRRSFRSIFSQIMKNIQLVMKKGVEGIRICC 444
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+V IDY A T YG G+KV++S
Sbjct: 445 SGRLKGAEIARTECGKYGKVSRNVFNQKIDYAPAEVSTRYGILGVKVWISY 495
>gi|15790638|ref|NP_280462.1| 30S ribosomal protein S3P [Halobacterium sp. NRC-1]
gi|169236377|ref|YP_001689577.1| 30S ribosomal protein S3P [Halobacterium salinarum R1]
gi|21264507|sp|P15009|RS3_HALSA RecName: Full=30S ribosomal protein S3P; AltName: Full=HHAS3;
AltName: Full=HS4
gi|2425182|dbj|BAA22276.1| ribosomal protein S3 [Halobacterium salinarum]
gi|10581165|gb|AAG19942.1| 30S ribosomal protein S3P [Halobacterium sp. NRC-1]
gi|167727443|emb|CAP14231.1| ribosomal protein S3 [Halobacterium salinarum R1]
Length = 302
Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 51/183 (27%), Positives = 89/183 (48%), Gaps = 4/183 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN- 96
+I E+ L +AG + + T +I++ + +PG++IGK G +I KI +L +
Sbjct: 16 QIDEFFAEELARAGYGGMELAPTPMGMQIVLKAEKPGMVIGKGGKNIRKITTQLEERFDL 75
Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156
+ + V EV +P++NA ++A +A LER FR+A + M GA G +++ SG+
Sbjct: 76 EDPQIDVQEVEEPDLNAQIVADRLANALERGWYFRKAGHTTIDRIMESGALGAEIVLSGK 135
Query: 157 LNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
+ G R E + G + A +D+G VA G+ G+ V + + D
Sbjct: 136 VTGN-RGRVEKFNRGYIKHNGEPAEEIVDHGKGVAVMKLGTIGVNVKIIPPNAELPDDFE 194
Query: 215 IPA 217
I
Sbjct: 195 IQE 197
>gi|56181346|gb|AAV83767.1| ribosomal protein S3 [Halimeda simulans]
gi|56181348|gb|AAV83768.1| ribosomal protein S3 [Halimeda simulans]
Length = 275
Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 23/166 (13%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y L ED +R L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKQYAKAGFEKIEISRK 60
Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMT------------------NSEIHL 101
+N I++ +P ++IGKKG +++K+ + + + ++ L
Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRAPKAPAAGELGGQSKPKLFL 120
Query: 102 SVNEVPKPEINATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144
V + +++ A + + LE+R+ ++ K+ ++ +
Sbjct: 121 EVYVIRCQTGASSI-ADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 165
>gi|56181352|gb|AAV83770.1| ribosomal protein S3 [Halimeda simulans]
gi|56181358|gb|AAV83773.1| ribosomal protein S3 [Halimeda simulans]
gi|56181360|gb|AAV83774.1| ribosomal protein S3 [Halimeda simulans]
Length = 275
Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 23/166 (13%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y L ED +R L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKQYAKAGFEKIEISRK 60
Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMT------------------NSEIHL 101
+N I++ +P ++IGKKG +++K+ + + + ++ L
Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRAPKAPAAGELGGQSKPKLFL 120
Query: 102 SVNEVPKPEINATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144
V + +++ A + + LE+R+ ++ K+ ++ +
Sbjct: 121 EVYVIRCQTGASSI-ADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 165
>gi|316996014|dbj|BAD83474.2| ribosomal protein S3 [Nicotiana tabacum]
Length = 563
Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I II+ + R +++K+R L N TN+
Sbjct: 379 KVMELIEKFIDLNRIGEL-IRGIEMMIEIILRNRRIPYGYNYYLNEVKKMRSLLYNRTNT 437
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+LIAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 438 NTLIESVKIKSVYQSASLIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 497
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY +A T YG G+KV++S
Sbjct: 498 SGRLEGAEIARTECGKYGKTSCNVFNQKIDYASAEVSTRYGILGVKVWISY 548
Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 41/100 (41%), Gaps = 9/100 (9%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54
M +K NPI RL +N + +S WF+ YG L+++D+ +R Y + +
Sbjct: 1 MARKGNPISVRLDLNRSSDSSWFSDYY-YGKLVYQDVNLRSYFGSIRPPTRLTFGFRLGR 59
Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM 94
+I K R ++ P K + + K+
Sbjct: 60 CIIIHFPK--RTFIHFFLPRRPRRLKRREKSRPVKEKGRW 97
>gi|45358967|ref|NP_988524.1| 30S ribosomal protein S3P [Methanococcus maripaludis S2]
gi|61215571|sp|Q6LXE7|RS3_METMP RecName: Full=30S ribosomal protein S3P
gi|45047833|emb|CAF30960.1| SSU ribosomal protein S3P [Methanococcus maripaludis S2]
Length = 211
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 53/190 (27%), Positives = 99/190 (52%), Gaps = 4/190 (2%)
Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRK-KLSNMTNS 97
I EY + L +AG + I ++T RI V++ +PG +IG+KG ++++ + + +
Sbjct: 16 IDEYFKTKLVRAGYSHIDFKKTPIGTRITVFAEKPGFVIGRKGKMVKELTETLATEYSVK 75
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ V +V P+++ ++ IA LER + FR+ A++ M GA GV +I SG+L
Sbjct: 76 NPQIEVKQVENPDLDPAVVGHKIASSLERGMHFRKTAHSAIRRVMGSGAKGVAIIVSGKL 135
Query: 158 NGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
+G E SRTE +++G + + A ++ +A+ G G+ V + D + I
Sbjct: 136 SG-ERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGIVGVTVKIMRPDVSLPDEIVI 194
Query: 216 PAAEHRVVEK 225
+ E + V +
Sbjct: 195 SSGEIKEVSE 204
>gi|56181364|gb|AAV83776.1| ribosomal protein S3 [Halimeda simulans]
Length = 275
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 23/166 (13%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y L ED +R L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKQYAKAGFEKIEISRK 60
Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMT------------------NSEIHL 101
+N I++ +P ++IGKKG +++K+ + + + ++ L
Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRAPKAPAAGELGGQSKPKLFL 120
Query: 102 SVNEVPKPEINATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144
V + +++ A + + LE+R+ ++ K+ ++ +
Sbjct: 121 EVYVIRCQTGASSI-ADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 165
>gi|159905652|ref|YP_001549314.1| 30S ribosomal protein S3P [Methanococcus maripaludis C6]
gi|226697730|sp|A9A9Q9|RS3_METM6 RecName: Full=30S ribosomal protein S3P
gi|159887145|gb|ABX02082.1| ribosomal protein S3 [Methanococcus maripaludis C6]
Length = 211
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 55/192 (28%), Positives = 102/192 (53%), Gaps = 4/192 (2%)
Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRK-KLSNMTNS 97
I EY + L +AG + I +++T RI V++ +PG +IG+KG ++++ + + +
Sbjct: 16 IDEYFKTKLVRAGYSHIDLKKTPIGTRITVFAEKPGFVIGRKGKMVKELTETLSTEYAVN 75
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ V +V P+++ ++ IA LER + FR+ A++ M GA GV +I SG+L
Sbjct: 76 NPQIEVKQVESPDLDPAIVGHKIASSLERGMHFRKTAHSAIRRVMGSGAKGVAIIVSGKL 135
Query: 158 NGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
+G E SRTE +++G + + A ++ +A+ G G+ V + D + TI
Sbjct: 136 SG-ERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGVVGVTVKIMKPDVSLPDEITI 194
Query: 216 PAAEHRVVEKDS 227
+ E + V + S
Sbjct: 195 LSGEIKEVTEYS 206
>gi|150402573|ref|YP_001329867.1| 30S ribosomal protein S3P [Methanococcus maripaludis C7]
gi|189045018|sp|A6VGZ0|RS3_METM7 RecName: Full=30S ribosomal protein S3P
gi|150033603|gb|ABR65716.1| ribosomal protein S3 [Methanococcus maripaludis C7]
Length = 211
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 55/192 (28%), Positives = 102/192 (53%), Gaps = 4/192 (2%)
Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRK-KLSNMTNS 97
I EY + L +AG + I +++T RI V++ +PG +IG+KG ++++ + + +
Sbjct: 16 IDEYFKTKLVRAGYSHIDLKKTPIGTRITVFAEKPGFVIGRKGKMVKELTETLSTEYAVN 75
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ V +V P+++ ++ IA LER + FR+ A++ M GA GV +I SG+L
Sbjct: 76 NPQIEVKQVESPDLDPAIVGHKIASSLERGMHFRKTAHSAIRRVMGSGAKGVSIIVSGKL 135
Query: 158 NGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
+G E SRTE +++G + + A ++ +A+ G G+ V + D + TI
Sbjct: 136 SG-ERSRTEKFMDGYMKHCGEPAEALVNKSHQLAKLKLGVVGVTVKIMKPDVSLPDEITI 194
Query: 216 PAAEHRVVEKDS 227
+ E + V + S
Sbjct: 195 LSGEIKEVTEYS 206
>gi|320148731|emb|CBJ23369.1| ribosomal protein S3 [Beta vulgaris subsp. maritima]
Length = 551
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 53/171 (30%), Positives = 90/171 (52%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ + ++ + G+ + LI+ II+ + R +++K+R LSN TN+
Sbjct: 379 KVMKLIEKFIDLGGI-RELIKGIEMMIEIILKNRRIPYGSNSYLNEVKKMRSLLSNRTNT 437
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLER-RVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+LIAQ I+ QL++ R FR + V+ M+ G +G+++
Sbjct: 438 NTLIESVKIKSVYQSASLIAQDISFQLKKKRGSFRSIFSKIVKKIPLVMKRGVEGIRICC 497
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ L IDY +A T YG G+KV++S
Sbjct: 498 SGRLEGAEIARTECGKYGKTSCNVLHQKIDYASAEVSTRYGIVGVKVWISY 548
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
M +K NPI RL +N + +S WF YG L+++D+ +R Y L
Sbjct: 1 MARKGNPISVRLDLNRSSDSSWF-NDYYYGKLVYQDINLRSYF----GSIRPPTRLTFGF 55
Query: 61 HKNCRIIVYSARPGLI 76
II++ + I
Sbjct: 56 RLGRCIIIHFQKRTFI 71
>gi|56181268|gb|AAV83728.1| ribosomal protein S3 [Halimeda incrassata]
Length = 226
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 43/177 (24%), Positives = 82/177 (46%), Gaps = 17/177 (9%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y L ED +R L +AG I I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKKYAKAGFENIKISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATL-- 115
+ I++ + +P ++IGKKG +++ +K++ + ++ S N KP++ L
Sbjct: 61 IENHIEIVIRAQKPEILIGKKGENLKNFQKEIKKLIFKYRGLNQSRNAQSKPKLRVILHV 120
Query: 116 ---------IAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASGRLNGA 160
IA + + LE+R+ ++ K+ ++ + S ++ +
Sbjct: 121 IRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQRERALRSSAVSTSIDSS 177
>gi|290454863|emb|CBH29641.1| ribosomal protein S3 [Candidatus Phytoplasma vitis]
Length = 147
Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats.
Identities = 47/145 (32%), Positives = 83/145 (57%), Gaps = 4/145 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y+++ G+I G + + + K+ + N +I +++ EV A L+
Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKIQINIFEVKAINKIAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSA 141
AQ+IA QL++R ++ +K A+Q A
Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKA 145
>gi|290454854|emb|CBH29635.1| ribosomal protein S3 [Candidatus Phytoplasma ulmi]
gi|290454875|emb|CBH29649.1| ribosomal protein S3 [Candidatus Phytoplasma ulmi]
Length = 147
Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats.
Identities = 47/145 (32%), Positives = 83/145 (57%), Gaps = 4/145 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y+++ G+I G + + + K+ + N +I +++ EV A L+
Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKIQINIFEVKAFNKIAILV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSA 141
AQ+IA QL++R ++ +K A+Q A
Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKA 145
>gi|56181060|gb|AAV83652.1| ribosomal protein S3 [Halimeda gracilis]
Length = 152
Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats.
Identities = 46/156 (29%), Positives = 82/156 (52%), Gaps = 5/156 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R LQ +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYVLEDNFLRTILQKKYSRAGFEKIEISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
+ I++++ +P ++IGKKG ++E +K++ + + + V + + +A+ IA
Sbjct: 61 VENHIEIVIHAQKPDILIGKKGENLELFQKEIKHFNTKK--KVILYVRRCKTSASSIADF 118
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155
I Q +E+RV ++ + G+K+ SG
Sbjct: 119 IVQNIEKRVPYKLIF--ILLKKHFKIDFGMKIQISG 152
>gi|56180931|gb|AAV83566.1| ribosomal protein S3 [Halimeda cuneata]
gi|56180934|gb|AAV83568.1| ribosomal protein S3 [Halimeda cuneata]
Length = 164
Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats.
Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 11/165 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S W+A Y + ED +R +L +A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKYYSKYVLEDNFVRTFLSEKYSRARFEKIHISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSV------NEVPKPEINA 113
+ I++Y+ +P ++IGKKG + + K S +I + +
Sbjct: 61 IEDHLEIVIYAQKPDILIGKKGVKNFQKQIKTSIFQYRQIEWNSKLKVILYIFQCKPSAS 120
Query: 114 TLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155
+ IA I + LE+R+ ++ K+ ++ + G+K+ SG
Sbjct: 121 SAIADFIVEHLEKRIPYKVVFTLLKKHLKRTKQS-TLGMKIQISG 164
>gi|56181354|gb|AAV83771.1| ribosomal protein S3 [Halimeda simulans]
Length = 275
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 23/166 (13%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y L ED +R L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKQYAKAGFEKIEISRK 60
Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMT------------------NSEIHL 101
+N I++ +P ++IGKKG +++K+ + + + ++ L
Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRAPKAPAAGELGGQSKPKLFL 120
Query: 102 SVNEVPKPEINATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144
V + +++ A + + LE+R+ ++ K+ ++ +
Sbjct: 121 EVYVIRCQTGASSI-ADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 165
>gi|156619315|gb|ABU88337.1| ribosomal protein S3 [Chlamydomonas moewusii]
Length = 800
Score = 111 bits (277), Expect = 1e-22, Method: Composition-based stats.
Identities = 44/118 (37%), Positives = 67/118 (56%), Gaps = 1/118 (0%)
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG-AD 147
+ L + I + A+++++S+ LE+R FR+ +K ++ MR
Sbjct: 672 QNLQLVPKISIKFFSVNQKALNLKASIVSESVVDALEKRKAFRKVIKTTKENLMRNSEIK 731
Query: 148 GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
GVK+ +GRLNGAE++RTE GRVPLQTLRA++DY A T YG G+KV++
Sbjct: 732 GVKIQVAGRLNGAEIARTEWVRAGRVPLQTLRANLDYSYRTANTIYGIIGVKVWIFKG 789
Score = 72.7 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 47/128 (36%), Gaps = 10/128 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFA--RGSEYGALLHEDLKIREYLQCHLKQ--------A 50
MGQK++P FR+G+ S+WFA ++Y + ED IR+ L +
Sbjct: 1 MGQKVHPSGFRVGITKKHQSQWFARFNKNKYSQTVLEDRMIRDTLNKLFPELLNPSTKGG 60
Query: 51 GVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPE 110
K K RI ++ + G I KL + + + + + K +
Sbjct: 61 SAPKRDQNARIKKSRITQIKIERNIVPYQIGIQIHAENCKLLKSSIKNLQVKKDILVKLQ 120
Query: 111 INATLIAQ 118
+
Sbjct: 121 KTRQYLTN 128
>gi|41179046|ref|NP_958402.1| ribosomal protein S3 [Chlamydomonas reinhardtii]
gi|32700064|sp|Q08365|RR3_CHLRE RecName: Full=30S ribosomal protein S3, chloroplastic; AltName:
Full=ORF 712
gi|28269769|tpg|DAA00947.1| TPA_inf: ribosomal protein S3 [Chlamydomonas reinhardtii]
Length = 712
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 44/115 (38%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 95 TNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRA----VQSAMRFGADGVK 150
I + A+ +A SI LE+R FR +K+A + + GVK
Sbjct: 594 PKISIKFFSVKTTNLLEKASTVADSIVDALEKRKAFRGVIKKAKEDLMLRSRVTRVKGVK 653
Query: 151 VIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+ +GRLNGAE++R+E GRVPLQTLRA+IDY A T YG G+KV++
Sbjct: 654 IQVAGRLNGAEIARSEWVRAGRVPLQTLRANIDYAYRTANTIYGIIGVKVWIFKG 708
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFA--RGSEYGALLHEDLKIREYLQCHLKQ 49
MGQK++P+ FR+G+ S+WFA + Y + ED +R L
Sbjct: 1 MGQKVHPLGFRVGITKKHQSQWFARFQKYAYSQSVFEDHMLRTTLVNLFSN 51
>gi|302748885|gb|ADL63922.1| ribosomal protein S3 [Morus alba]
Length = 490
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 7/170 (4%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ + + G+ + + I + + +++K+R LSN TN+
Sbjct: 320 KVMGLIDKFIDLGGIGEF---KKGIEMMIEIILRNRRIPYEYSN-EVKKMRSFLSNRTNT 375
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSA---MRFGADGVKVIAS 154
+ ++ +A+LIAQ I+ QL + FR + V+ M+ G +G+++ S
Sbjct: 376 NTLIESVKIKSVYQSASLIAQDISFQLRNKTSFRSIFSKIVKDIPLVMKKGVEGIRICCS 435
Query: 155 GRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
GRL GAE++RTEC G+ IDY +A T YG G+KV++S
Sbjct: 436 GRLEGAEIARTECGKYGKTSRNVFNQKIDYASAEVSTRYGILGVKVWISY 485
>gi|56181228|gb|AAV83708.1| ribosomal protein S3 [Halimeda borneensis]
Length = 227
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 19/163 (11%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATL---- 115
+ I++ + +P ++IGKKG ++ +K++ + S N+ + L
Sbjct: 61 IEDHIEIVIRAQKPEILIGKKGEKLKNFQKEIKKLIFKYRGFSSNKSRDVQSKQKLKVIL 120
Query: 116 -----------IAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144
IA + + LE+R+ ++ K+ ++ +
Sbjct: 121 YVIRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 163
>gi|1173249|sp|P46307|RR3_CHLMO RecName: Full=30S ribosomal protein S3, chloroplastic
gi|575476|gb|AAA84159.1| ribosomal protein S3 [Chlamydomonas moewusii]
Length = 800
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 44/118 (37%), Positives = 67/118 (56%), Gaps = 1/118 (0%)
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG-AD 147
+ L + I + A+++++S+ LE+R FR+ +K ++ MR
Sbjct: 672 QNLQLVPKISIKFFSVNQKALNLKASIVSESVVDALEKRKAFRKVIKTTKENLMRNSEIK 731
Query: 148 GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
GVK+ +GRLNGAE++RTE GRVPLQTLRA++DY A T YG G+KV++
Sbjct: 732 GVKIQVAGRLNGAEIARTEWVRAGRVPLQTLRANLDYSYRTANTIYGIIGVKVWIFKG 789
Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/128 (21%), Positives = 47/128 (36%), Gaps = 10/128 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFA--RGSEYGALLHEDLKIREYLQCHLKQ--------A 50
MGQK++P FR+G+ S+WFA ++Y + ED IR+ L +
Sbjct: 1 MGQKVHPSGFRVGITKKHQSQWFARFNKNKYSQTVLEDRMIRDTLNKLFPELLNPSTKGG 60
Query: 51 GVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPE 110
K K RI ++ + G I KL + + + + + K +
Sbjct: 61 SAPKRHQNARIKKSRITQIKIERNIVPYQIGIQIHAENCKLLKSSIKNLQVKKDILVKLQ 120
Query: 111 INATLIAQ 118
+
Sbjct: 121 KTRQYLTN 128
>gi|290454869|emb|CBH29645.1| ribosomal protein S3 [Candidatus Phytoplasma vitis]
Length = 147
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 46/145 (31%), Positives = 83/145 (57%), Gaps = 4/145 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ + ++ +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNYYPKSTISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y+++ G+I G + + + K+ + N +I +++ EV A L+
Sbjct: 61 KKSNDEFIEIDLYTSKIGIIQGPENKNKNSLINKIEKLINKKIQINIFEVKAINKIAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSA 141
AQ+IA QL++R ++ +K A+Q A
Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKA 145
>gi|213517427|gb|ACJ50133.1| ribosomal protein S3 [Chlamydomonas reinhardtii]
Length = 712
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 44/115 (38%), Positives = 61/115 (53%), Gaps = 4/115 (3%)
Query: 95 TNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRA----VQSAMRFGADGVK 150
I + A+ +A SI LE+R FR +K+A + + GVK
Sbjct: 594 PKISIKFFSVKTTNLLEKASTVADSIVDALEKRKAFRGVIKKAKEDLMLRSRVTRVKGVK 653
Query: 151 VIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+ +GRLNGAE++R+E GRVPLQTLRA+IDY A T YG G+KV++
Sbjct: 654 IQVAGRLNGAEIARSEWVRAGRVPLQTLRANIDYAYRTANTIYGIIGVKVWIFKG 708
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFA--RGSEYGALLHEDLKIREYLQCHLKQ 49
MGQK++P+ FR+G+ S+WFA + Y + ED +R L
Sbjct: 1 MGQKVHPLGFRVGITKKHQSQWFARFQKYAYSQSVFEDHMLRTTLVNLFSN 51
>gi|162279931|ref|NP_064078.2| ribosomal protein S3 [Beta vulgaris subsp. vulgaris]
gi|87248050|gb|ABD36079.1| ribosomal protein S3 [Beta vulgaris subsp. vulgaris]
gi|148491435|dbj|BAA99471.2| ribosomal protein S3 [Beta vulgaris subsp. vulgaris]
Length = 551
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 53/171 (30%), Positives = 90/171 (52%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ + ++ + G+ + LI+ II+ + R +++K+R LSN TN+
Sbjct: 379 KVMKLIEKFIDLGGI-RELIKGIEMMIEIILKNIRIAYGSNSYLNEVKKMRSLLSNRTNT 437
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLER-RVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+LIAQ I+ QL++ R FR + V+ M+ G +G+++
Sbjct: 438 NTLIESVKIKSVYQSASLIAQDISFQLKKKRGSFRSIFSKIVKKIPLVMKRGVEGIRICC 497
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ L IDY +A T YG G+KV++S
Sbjct: 498 SGRLEGAEIARTECGKYGKTSCNVLHQKIDYASAEVSTRYGIVGVKVWISY 548
Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
M +K NPI RL +N + +S WF Y L+++DL +R Y L
Sbjct: 1 MARKGNPISVRLDLNRSSDSSWF-NDYYYSKLVYQDLNLRSYF----GSIRPPTRLTFGF 55
Query: 61 HKNCRIIVYSARPGLI 76
II++ + I
Sbjct: 56 RLGRCIIIHFQKRTFI 71
>gi|290454872|emb|CBH29647.1| ribosomal protein S3 [Rubus stunt phytoplasma]
Length = 147
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 46/145 (31%), Positives = 82/145 (56%), Gaps = 4/145 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK NP RLG+ TW S+W+ + L+ ED KIR ++ H ++ +++I I+R
Sbjct: 1 MGQKSNPNGLRLGIIRTWESKWYDVDKKVPFLVGEDFKIRTLIKNHYPKSTISQIEIKRL 60
Query: 61 HKNC----RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
K+ I +Y ++ G+I G + + + K+ + N ++ +++ EV A L+
Sbjct: 61 KKSNDEFIEIDLYISKIGIIQGPENKNKNSLINKIEKLINKKVQINIFEVKAINKIAVLV 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSA 141
AQ+IA QL++R ++ +K A+Q A
Sbjct: 121 AQNIAMQLQQRAFYKAVLKSAIQKA 145
>gi|295154456|gb|ADF83137.1| ribosomal protein S3 [Orcuttia viscida]
gi|295154512|gb|ADF83165.1| ribosomal protein S3 [Orcuttia inaequalis]
Length = 147
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 51/143 (35%), Positives = 83/143 (58%), Gaps = 1/143 (0%)
Query: 52 VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPE 110
+ I I+R +I++ P L+ K ++EK +K N N +++++ +V +P
Sbjct: 5 ITHIEIQREIDTIHVIIHIGFPNLLKKKGAIEELEKDIQKKVNSVNQRLNIAIEKVKEPY 64
Query: 111 INATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLE 170
++A+ IA QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R EC +
Sbjct: 65 RQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAECIKK 124
Query: 171 GRVPLQTLRAHIDYGTAVAETAY 193
GR+PLQT+RA IDY T Y
Sbjct: 125 GRLPLQTIRAKIDYCCYPIRTIY 147
>gi|257387882|ref|YP_003177655.1| 30S ribosomal protein S3P [Halomicrobium mukohataei DSM 12286]
gi|257170189|gb|ACV47948.1| ribosomal protein S3 [Halomicrobium mukohataei DSM 12286]
Length = 317
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 52/181 (28%), Positives = 89/181 (49%), Gaps = 4/181 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN- 96
+I E+ L +AG + + +T +I++ + +PG++IGK G +I KI L
Sbjct: 16 QIDEFFADELGRAGYGGMDVAKTPMGTQIVLKAEKPGMVIGKGGKNIRKITTTLEEEFGL 75
Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156
+ + V EV +P++NA ++A + LER FR+A + M GA G +++ SG+
Sbjct: 76 EDPQVDVQEVDEPDLNARIVADRLGNALERGWYFRKAGHTTIDRIMEAGAKGAEIVLSGK 135
Query: 157 LNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
+ GA SR E + G + A +D G VA G+ G++V + + D
Sbjct: 136 VTGA-RSRVEKFNRGYIKHNGEPAENIVDSGVGVAVMKLGTIGVRVKIIPPEAELPDDFE 194
Query: 215 I 215
I
Sbjct: 195 I 195
>gi|56180937|gb|AAV83570.1| ribosomal protein S3 [Halimeda cuneata]
Length = 164
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 11/165 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S W+A Y + ED +R +L +A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKYYSKYVLEDNFVRTFLSEKYSRARFEKIHISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSV------NEVPKPEINA 113
+ I++Y+ +P ++IGKKG + + K S +I + +
Sbjct: 61 IEDHLEIVIYAQKPDILIGKKGVKNFQKQIKTSIFQYRQIEWNSKLKVILYIFQCKPXAS 120
Query: 114 TLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155
+ IA I + LE+R+ ++ K+ ++ + G+K+ SG
Sbjct: 121 SAIADFIVEHLEKRIPYKVVFTLLKKHLKRTKQS-TLGMKIQISG 164
>gi|323435098|ref|YP_004222316.1| ribosomal protein S3 [Beta vulgaris subsp. maritima]
gi|317905652|emb|CBJ14050.1| ribosomal protein S3 [Beta vulgaris subsp. maritima]
gi|319439831|emb|CBJ17541.1| ribosomal protein S3 [Beta vulgaris subsp. maritima]
Length = 551
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 53/171 (30%), Positives = 90/171 (52%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ + ++ + G+ + LI+ II+ + R +++K+R LSN TN+
Sbjct: 379 KVMKLIEKFIDLGGI-RELIKGIEMMIEIILKNIRIAYGSNSYLNEVKKMRSLLSNRTNT 437
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLER-RVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+LIAQ I+ QL++ R FR + V+ M+ G +G+++
Sbjct: 438 NTLIESVKIKSVYQSASLIAQDISFQLKKKRGSFRSIFSKIVKKIPLVMKRGVEGIRICC 497
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ L IDY +A T YG G+KV++S
Sbjct: 498 SGRLEGAEIARTECGKYGKTSCNVLHQKIDYASAEVSTRYGIVGVKVWISY 548
Score = 49.2 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 32/76 (42%), Gaps = 5/76 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
M +K NPI RL +N + +S WF Y L+++D+ +R Y L
Sbjct: 1 MARKGNPISVRLDLNRSSDSSWF-NDYYYSKLVYQDINLRSYF----GSIRPPTRLTFGF 55
Query: 61 HKNCRIIVYSARPGLI 76
II++ + I
Sbjct: 56 RLGRCIIIHFQKRTFI 71
>gi|56181274|gb|AAV83731.1| ribosomal protein S3 [Halimeda incrassata]
gi|56181276|gb|AAV83732.1| ribosomal protein S3 [Halimeda incrassata]
Length = 233
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 40/179 (22%), Positives = 79/179 (44%), Gaps = 21/179 (11%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y L ED +R L +AG I I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKKYAKAGFENIKISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATL---- 115
+ I++ + +P + IGKKG +++ +K++ + + +N+ + + L
Sbjct: 61 IENHIEIVIRAQKPEIFIGKKGENLKNFQKEIKKLIFK--YRGLNQSRNAQSKSKLRVIL 118
Query: 116 -----------IAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASGRLNGA 160
IA + + LE+R+ ++ K+ ++ + S ++ +
Sbjct: 119 HVIRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQRERALRSSTVSTSIDSS 177
>gi|223928021|gb|ACN23666.1| ribosomal protein S3 [Halimeda magnidisca]
gi|223928024|gb|ACN23668.1| ribosomal protein S3 [Halimeda magnidisca]
gi|223928027|gb|ACN23670.1| ribosomal protein S3 [Halimeda magnidisca]
gi|223928030|gb|ACN23672.1| ribosomal protein S3 [Halimeda magnidisca]
gi|223928033|gb|ACN23674.1| ribosomal protein S3 [Halimeda magnidisca]
Length = 166
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 11/166 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L +A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYVLEDNFVRTILSEKYNRAQFEKIHISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111
+ I++++ +P ++IGKKG ++E +K++ NS++ + +
Sbjct: 61 IEDHLEIVIHAQKPDVLIGKKGENLEIFQKQMKKFIFQYRQIEWNSKLKVILYIFRCQTS 120
Query: 112 NATLIAQSIAQQLERRVVFRRAM--KRAVQSAMRFGADGVKVIASG 155
++ IA I + LE+RV ++ + + G+K+ SG
Sbjct: 121 ASSAIADFIVEHLEKRVPYKVVFTLLKKHLKRKKQSTLGMKIQISG 166
>gi|193084211|gb|ACF09875.1| ribosomal protein S3 [uncultured marine group II euryarchaeote
KM3-136-D10]
Length = 400
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 54/188 (28%), Positives = 92/188 (48%), Gaps = 8/188 (4%)
Query: 35 EDLKIREYLQCHLKQAGVAKILIERTHKNC----RIIVYSARPGLIIGKKGTDIEKIRKK 90
E +REYL ++AG + ER ++ + + R G++IG++G I +++++
Sbjct: 16 ERQLVREYLLKETERAGFGGLHFERAFDQTSICTKVTLQAERVGMVIGRRGKVINELQRR 75
Query: 91 LSNMTN-SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGV 149
+ N L V E+ P +NA ++A +A LER FRRA +V + + GA G
Sbjct: 76 IRTDFNLENPKLQVEEIENPALNAQVMASKLASALERGWYFRRAGHSSVLNVIEAGAKGC 135
Query: 150 KVIASGRLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
+I +G+L G+ RTE +L+G + +T H+D G A A G+ G V +
Sbjct: 136 LIIIAGKLTGS-RHRTEKFLKGHIKFCGETALTHMDVGQATAVVKLGTIGCTVAIMKPGT 194
Query: 208 VSDSDSTI 215
+ I
Sbjct: 195 KLPHEVDI 202
>gi|272716513|gb|ACZ95535.1| ribosomal protein S3 [Dacrycarpus imbricatus]
Length = 617
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 52/196 (26%), Positives = 89/196 (45%), Gaps = 13/196 (6%)
Query: 22 WFARGSEYGALLHEDLKI-REYLQCHLKQ-AGVAKILIERTHKN------CRIIVYSARP 73
W ++ + LL +I R++ ++ + +G K +I + +
Sbjct: 421 WRSKKKIFTHLLRRSKEILRKHFHTYIHKGSGSVKKVILGRIGGVMRGIEMMLEIRLRGA 480
Query: 74 GLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFR 131
G+ G +++K+R LS TN+ + ++ +A+LIAQ I+ +L R FR
Sbjct: 481 GIPYGYNYYLNEVQKMRSLLSGRTNTNTFIGSVKIKSVYQSASLIAQDISFRLRDRKSFR 540
Query: 132 RAMKRAVQSAMRFGAD---GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAV 188
V+ G+++ SGRL GAE++RTEC G+ R IDY +A
Sbjct: 541 SIFYELVRDIPLVMLKRVGGIRICCSGRLKGAEIARTECMEYGKTSCNAFRHRIDYASAK 600
Query: 189 AETAYGSCGIKVYVSL 204
T YG G+KV++S
Sbjct: 601 VSTRYGILGVKVWISF 616
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 8/79 (10%)
Query: 3 QKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL-------QCHLKQAGVAKI 55
QK+NPI RL +N + +S WF+ YG L+++D+ +R+Y + + + +
Sbjct: 42 QKVNPISVRLHLNRSSDSSWFSDHY-YGKLVYQDVNLRDYFGSIRPPTRINPFGFRLGRC 100
Query: 56 LIERTHKNCRIIVYSARPG 74
++ + K I ++ R
Sbjct: 101 ILHHSPKRTFIHLFLPRRP 119
>gi|223927818|gb|ACN23532.1| ribosomal protein S3 [Halimeda discoidea]
Length = 166
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 11/166 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S W+A +Y + ED +R L +A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKDYSKYVLEDNFVRTLLSKKYNRARFEKIQISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111
+ I++++ +P ++IG+KG ++E +K++ NS++ + +
Sbjct: 61 IEDHLEIVIHAQKPDILIGRKGENLEIFQKQIKTFIFQYRQIEWNSKLKVILYIFRCKTS 120
Query: 112 NATLIAQSIAQQLERRVVFRRAM--KRAVQSAMRFGADGVKVIASG 155
++ IA I LE+R+ ++ + + G+K+ SG
Sbjct: 121 ASSAIADFIVDHLEKRIPYKVVFTLLKKHLKRKKQSTLGMKIPISG 166
>gi|283050685|gb|ADB07779.1| ribosomal protein S3 [Prosphytochloa prehensilis]
Length = 160
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 32/159 (20%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIE 60
Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88
+ I I++ +I++ P L+ K ++EK
Sbjct: 61 SDSSSEVITHNRKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERR 127
+K N N +++ + +V +P ++A+ IA QL+ R
Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNR 159
>gi|223927747|gb|ACN23486.1| ribosomal protein S3 [Halimeda cuneata]
gi|223927750|gb|ACN23488.1| ribosomal protein S3 [Halimeda cuneata]
Length = 166
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 11/166 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L +A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYVLEDHFVRTLLSQKYNRARFEKIHISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111
+ I++++ +P L+IGKKG ++E +K++ NS + + +
Sbjct: 61 IEDHLEIVIHAQKPDLLIGKKGENLEIFQKQIKKFIFQYRQIEWNSRLKVILYIFRCKTS 120
Query: 112 NATLIAQSIAQQLERRVVFRRAM--KRAVQSAMRFGADGVKVIASG 155
++ IA I + LE+RV ++ + + G+K+ SG
Sbjct: 121 ASSAIADFIVEHLEKRVPYKVVFTLLKKHLKRKKQSILGMKIKISG 166
>gi|186920141|ref|YP_001874795.1| ribosomal protein S3 [Hemiselmis andersenii]
gi|186461087|gb|ACC78249.1| ribosomal protein S3 [Hemiselmis andersenii]
Length = 219
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 61/221 (27%), Positives = 97/221 (43%), Gaps = 17/221 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQ------------CHLK 48
MGQKI L N WNS W+ + Y + EDL + YL+ HL
Sbjct: 1 MGQKIVVNSLHLKKNKNWNSFWYVDFNAYLPVFREDLYLYLYLRSFSKLKYNILKRKHLY 60
Query: 49 QAGVAKILIERTHKNCRIIVYSARPGLIIGKK---GTDIEKIRKKLSNMTNSEIHLSVNE 105
Q + K I R K+ + + KK ++++ +L N N + + V
Sbjct: 61 QIEIVKCFIYRIDKSLVLNLQLMGLKTKQLKKSDFPFFMKQLLIRLKNFFNYKNNRFVIY 120
Query: 106 VPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRT 165
+ A A +A LE+RV F+ M + + + G+++ GRLN + +
Sbjct: 121 YKIGKSTALFTALRVATLLEKRVRFQSQMVKKI--IKQLNVAGIRISCKGRLNFVDRATK 178
Query: 166 ECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
G VPLQT++A+IDYG VA T G +KV++ ++
Sbjct: 179 AQLSSGSVPLQTIKANIDYGLIVANTKKGLQSVKVWILNKE 219
>gi|223927298|gb|ACN23262.1| ribosomal protein S3 [Halimeda borneensis]
Length = 224
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 19/163 (11%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATL---- 115
+ I++ + +P ++IGKKG ++ +K++ + S N+ + L
Sbjct: 61 IEDHIEIVIRAQKPEILIGKKGEKLKNFQKEIKKLIFKYRGFSSNKSRDVQSKQKLKVIL 120
Query: 116 -----------IAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144
IA + + LE+R+ ++ K+ ++ +
Sbjct: 121 YVIRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 163
>gi|283050653|gb|ADB07755.1| ribosomal protein S3 [Oryza ridleyi]
Length = 161
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 32/159 (20%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WFA+ Y L ED KIR ++ ++++
Sbjct: 1 MGQKINPLGFRLGTTQNHHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKGSNRKIE 60
Query: 52 ----------------------VAKILIERTHKNCRIIVYSARPGLIIGKKG-TDIEKIR 88
+ I I++ +I++ P L+ K ++EK
Sbjct: 61 SDSSFEVITHNKKMDSGSSSEVITHIEIQKEIDTIHVIIHIGFPNLLKKKGAIEELEKDL 120
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERR 127
+K N N +++ + +V +P ++A+ IA QL+ R
Sbjct: 121 QKEVNSVNQRLNIGIEKVKEPYRQPNILAEYIAFQLKNR 159
>gi|71057455|emb|CAJ18180.1| ribosomal protein S3 [Halimeda macrophysa]
Length = 166
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 11/166 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED IR L +A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYVLEDNFIRTLLSEKYNRARFEKIHISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111
+ I++Y+ +P L+IGKKG ++E +K++ NS + + +
Sbjct: 61 IEDHIEIVIYAQKPDLLIGKKGENLEIFQKQIKKSIFQYREIEWNSNLKVILYIFRCKTS 120
Query: 112 NATLIAQSIAQQLERRVVFRRAM--KRAVQSAMRFGADGVKVIASG 155
++ IA I + LE+R+ ++ + + G+K+ SG
Sbjct: 121 ASSAIADFIVEHLEKRIPYKVVFTLLKKHLKRKKQSTLGMKIKISG 166
>gi|56181021|gb|AAV83626.1| ribosomal protein S3 [Halimeda magnidisca]
gi|56181024|gb|AAV83628.1| ribosomal protein S3 [Halimeda magnidisca]
gi|223927974|gb|ACN23635.1| ribosomal protein S3 [Halimeda gigas]
gi|223927977|gb|ACN23637.1| ribosomal protein S3 [Halimeda gigas]
Length = 166
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 45/167 (26%), Positives = 82/167 (49%), Gaps = 13/167 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S W+A Y + ED +R L +A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSHWYASKKYYSKYVLEDHFVRTLLSEKYNRARFEKIQISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111
+ I++Y+ +P ++IGKKG ++E +K++ NS++ + +
Sbjct: 61 IEDHLEIVIYAQKPDILIGKKGENLEIFQKQIKTFIFQYRQIEWNSKLKVILYIFQCKMS 120
Query: 112 NATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155
++ IA I + LE+R+ ++ K+ ++ + G+K+ SG
Sbjct: 121 ASSAIADFIVEHLEKRIPYKVVFTLLKKHLKR-QKQSTLGMKIQISG 166
>gi|223927759|gb|ACN23494.1| ribosomal protein S3 [Halimeda cuneata]
Length = 156
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 9/140 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L +A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYVLEDHFVRTLLSQKYNRARFEKIHISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111
+ I++++ +P L+IGKKG ++E +K++ NS + + +
Sbjct: 61 IEDHLEIVIHAQKPDLLIGKKGENLEIFQKQIKKFIFQYRQIEWNSRLKVILYIFRCKTS 120
Query: 112 NATLIAQSIAQQLERRVVFR 131
++ IA I + LE+RV ++
Sbjct: 121 ASSAIADFIVEHLEKRVPYK 140
>gi|223927804|gb|ACN23523.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927810|gb|ACN23527.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927813|gb|ACN23529.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927815|gb|ACN23530.1| ribosomal protein S3 [Halimeda discoidea]
Length = 154
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 39/140 (27%), Positives = 72/140 (51%), Gaps = 9/140 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S W+A +Y + ED +R L +A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKDYSKYVLEDNFVRTLLSKKYNRARFEKIQISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111
+ I++++ +P ++IG+KG ++E +K++ NS++ + +
Sbjct: 61 IEDHLEIVIHAQKPDILIGRKGENLEIFQKQIKTFIFQYRQIEWNSKLKVILYIFRCKTS 120
Query: 112 NATLIAQSIAQQLERRVVFR 131
++ IA I + LERR+ ++
Sbjct: 121 ASSAIADFIVEHLERRIPYK 140
>gi|56180970|gb|AAV83592.1| ribosomal protein S3 [Halimeda discoidea]
gi|56180973|gb|AAV83594.1| ribosomal protein S3 [Halimeda discoidea]
gi|56180976|gb|AAV83596.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927863|gb|ACN23562.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927866|gb|ACN23564.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927869|gb|ACN23566.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927885|gb|ACN23576.1| ribosomal protein S3 [Halimeda discoidea]
Length = 166
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 11/166 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S W+A Y + ED +R L +A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKYYSKYVLEDNFVRTLLSEKYSRARFEKIQISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111
+ I++++ +P ++IGKKG ++E +K++ NS++ + +
Sbjct: 61 IEDHLEIVIHAQKPDILIGKKGENLEIFQKQIKTFIFQYRQIEWNSKLKVILYIFRCKTS 120
Query: 112 NATLIAQSIAQQLERRVVFRRAM--KRAVQSAMRFGADGVKVIASG 155
++ IA I + LE+R+ ++ + + G+K+ SG
Sbjct: 121 ASSAIADFIVEHLEKRIPYKVVFTLLKKHLKRKKQSTLGMKIQISG 166
>gi|56181027|gb|AAV83630.1| ribosomal protein S3 [Halimeda taenicola]
gi|56181030|gb|AAV83632.1| ribosomal protein S3 [Halimeda taenicola]
gi|56181033|gb|AAV83634.1| ribosomal protein S3 [Halimeda taenicola]
gi|56181036|gb|AAV83636.1| ribosomal protein S3 [Halimeda taenicola]
Length = 166
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 81/166 (48%), Gaps = 11/166 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYVLEDYFVRTLLLEKYNRAGFEKIHISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111
+ I+V++ +P ++IGKKG ++E +K++ NS++ + +
Sbjct: 61 IEDHLEIVVHAQKPDILIGKKGENLEIFQKQIKTFIFQYRQIEWNSKLKVILYIFRCKTS 120
Query: 112 NATLIAQSIAQQLERRVVFRRAM--KRAVQSAMRFGADGVKVIASG 155
++ IA I + LE+R+ ++ + + G+K+ SG
Sbjct: 121 ASSAIADFIVEHLEKRIPYKVVFTLLKKHLKRKKQSTLGMKIQISG 166
>gi|223927777|gb|ACN23506.1| ribosomal protein S3 [Halimeda cuneata]
gi|223927780|gb|ACN23508.1| ribosomal protein S3 [Halimeda cuneata]
gi|223927783|gb|ACN23510.1| ribosomal protein S3 [Halimeda cuneata]
gi|223927786|gb|ACN23512.1| ribosomal protein S3 [Halimeda cuneata]
gi|223927789|gb|ACN23514.1| ribosomal protein S3 [Halimeda cuneata]
gi|223927792|gb|ACN23516.1| ribosomal protein S3 [Halimeda cuneata]
gi|223927797|gb|ACN23519.1| ribosomal protein S3 [Halimeda cuneata]
Length = 154
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 9/140 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L +A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYVLEDHFVRTLLSQKYNRARFEKIHISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111
+ I++++ +P L+IGKKG ++E +K++ NS + + +
Sbjct: 61 IEDHLEIVIHAQKPDLLIGKKGENLEIFQKQIKKFIFQYRQIEWNSRLKVILYIFRCKTS 120
Query: 112 NATLIAQSIAQQLERRVVFR 131
++ IA I + LE+RV ++
Sbjct: 121 ASSAIADFIVEHLEKRVPYK 140
>gi|302748735|gb|ADL63848.1| ribosomal protein S3 [Euphorbia milii]
Length = 469
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + + ++ I + + G +++K+R LSN T
Sbjct: 300 KVMELIEKFINLGEIGEL---IKGIEMMIEIILRNRTIPYGYNSYLNEMKKMRSLLSNRT 356
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ A+LIAQ I+ QL + FR + V+ M+ G G+++
Sbjct: 357 NTNTLIESVKIKSVYQCASLIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVKGIRI 416
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 417 SCSGRLEGAEIARTECGKYGKTSCNVFNQKIDYAFAEVSTRYGILGVKVWISY 469
>gi|56180985|gb|AAV83602.1| ribosomal protein S3 [Halimeda discoidea]
gi|56180988|gb|AAV83604.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927888|gb|ACN23578.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927891|gb|ACN23580.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927894|gb|ACN23582.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927897|gb|ACN23584.1| ribosomal protein S3 [Halimeda discoidea]
Length = 166
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 11/166 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S W+A Y + ED +R L +A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKYYSKYVLEDNFVRTLLSEKYNRARFEKIQISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111
+ I++++ +P ++IGKKG ++E +K++ NS++ + +
Sbjct: 61 IEDHLEIVIHAQKPDILIGKKGENLEIFQKQIKTFIFQYRQIEWNSKLKVILYIFRCKTS 120
Query: 112 NATLIAQSIAQQLERRVVFRRAM--KRAVQSAMRFGADGVKVIASG 155
++ IA I + LE+R+ ++ + + G+K+ SG
Sbjct: 121 ASSAIADFIVEHLEKRIPYKVVFTLLKKHLKRKKQSTLGMKIQISG 166
>gi|56181362|gb|AAV83775.1| ribosomal protein S3 [Halimeda simulans]
Length = 260
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 23/166 (13%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y L ED +R L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKQYAKAGFEKIEISRK 60
Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMT------------------NSEIHL 101
+N I++ +P ++IGKKG +++K+ + + + ++ L
Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRAPKAPGAGELSGQSKPKLFL 120
Query: 102 SVNEVPKPEINATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144
V + +++ A + + LE+R+ ++ K+ ++ +
Sbjct: 121 EVYVIRCQTGASSI-ADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 165
>gi|261888186|gb|ACY06041.1| ribosomal protein S3 [Volvox carteri f. nagariensis]
Length = 742
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 46/113 (40%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
Query: 94 MTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ-SAMRFGADGVKVI 152
+ I + A+++A SI LE+R FR +K+A + R GVK+
Sbjct: 625 IPKISIKFFSVKTTDILEKASIVADSIVDALEKRKAFRGVIKKAKEDLMRRRRVKGVKIQ 684
Query: 153 ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
SGRLNGAE++R+E GRVPLQTLRA+IDY A T YG G+KV++
Sbjct: 685 VSGRLNGAEIARSEWVRAGRVPLQTLRANIDYSYRTANTIYGIIGVKVWIFKG 737
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFA--RGSEYGALLHEDLKIREYLQCHLKQ 49
MGQK++P+ FR+G+ S+WFA + Y + ED +R+ L
Sbjct: 1 MGQKVHPLGFRVGITKKHQSQWFARFQKYGYSQSVFEDHMLRKTLLNLFSN 51
>gi|223927900|gb|ACN23586.1| ribosomal protein S3 [Halimeda discoidea]
Length = 166
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 11/166 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S W+A Y + ED +R L +A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKYYSKYVLEDNFVRTLLSEKYNRARFEKIQISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111
+ I++++ +P + IGKKG ++E +K++ NS++ + +
Sbjct: 61 IEDHLEIVIHAQKPDIFIGKKGENLEIFQKQIKTFIFQYRQIEWNSKLKVILYIFRCKTS 120
Query: 112 NATLIAQSIAQQLERRVVFRRAM--KRAVQSAMRFGADGVKVIASG 155
++ IA I + LE+R+ ++ + + G+K+ SG
Sbjct: 121 ASSAIADFIVEHLEKRIPYKVVFTLLKKHLKRKKQSTLGMKIQISG 166
>gi|288191251|gb|ADC43978.1| ribosomal protein S3 [Trigoniastrum hypoleucum]
Length = 500
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 325 KVMELIEKFINLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 383
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+LIAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 384 NTLIESVKIKSVYQSASLIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 443
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 444 SGRPKGAEIARTECGKYGKTSRNVFNQKIDYALAEVSTRYGILGVKVWISY 494
>gi|56181342|gb|AAV83765.1| ribosomal protein S3 [Halimeda monile]
Length = 291
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60
Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
+N +++ + +P ++IGKKG +++ +K++ +
Sbjct: 61 IENHLELVLRAQKPEVLIGKKGENLKNFQKEIKKLIFK 98
>gi|303243484|ref|ZP_07329826.1| ribosomal protein S3 [Methanothermococcus okinawensis IH1]
gi|302486045|gb|EFL48967.1| ribosomal protein S3 [Methanothermococcus okinawensis IH1]
Length = 219
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 56/187 (29%), Positives = 98/187 (52%), Gaps = 4/187 (2%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS-EI 99
EYL+ L +AG + + I++T RI V++ +PG +IG+KG ++++ + ++N
Sbjct: 18 EYLKNKLPRAGYSHMDIKKTPVGTRITVFAEKPGFVIGRKGRMVKELTETIANKYGVENP 77
Query: 100 HLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNG 159
+ V ++ P+++ ++AQ IA LER + FRR AV+ M GA G+ +I SG+L G
Sbjct: 78 QIEVKQIQNPDLDPEVVAQKIASSLERGMHFRRVAHSAVRRVMGAGAKGIVIIISGKLTG 137
Query: 160 AELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
E SRTE ++EG + + + +A+ G G+ V + + V + I
Sbjct: 138 -ERSRTEKFMEGYMKHCGEPSEVLVKKAHKLAKLKLGIIGVTVKIMPPEIVLPDEIVIRD 196
Query: 218 AEHRVVE 224
V E
Sbjct: 197 GAGEVQE 203
>gi|223927903|gb|ACN23588.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927906|gb|ACN23590.1| ribosomal protein S3 [Halimeda discoidea]
Length = 166
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 11/166 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S W+A Y + ED +R L +A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYAPKKYYSKYVLEDNFVRTLLSEKYNRARFEKIQISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111
+ I++++ +P ++IGKKG ++E +K++ NS++ + +
Sbjct: 61 IEDHLEIVIHAQKPDILIGKKGENLEIFQKQIKTFIFQYRQIEWNSKLKVILYIFRCKTS 120
Query: 112 NATLIAQSIAQQLERRVVFRRAM--KRAVQSAMRFGADGVKVIASG 155
++ IA I + LE+R+ ++ + + G+K+ SG
Sbjct: 121 ASSAIADFIVEHLEKRIPYKVVFTLLKKHLKRKKQSTLGMKIQISG 166
>gi|148642816|ref|YP_001273329.1| 30S ribosomal protein S3P [Methanobrevibacter smithii ATCC 35061]
gi|222445047|ref|ZP_03607562.1| hypothetical protein METSMIALI_00664 [Methanobrevibacter smithii
DSM 2375]
gi|261350384|ref|ZP_05975801.1| ribosomal protein S3 [Methanobrevibacter smithii DSM 2374]
gi|172048064|sp|A5UL83|RS3_METS3 RecName: Full=30S ribosomal protein S3P
gi|148551833|gb|ABQ86961.1| ribosomal protein S3p [Methanobrevibacter smithii ATCC 35061]
gi|222434612|gb|EEE41777.1| hypothetical protein METSMIALI_00664 [Methanobrevibacter smithii
DSM 2375]
gi|288861167|gb|EFC93465.1| ribosomal protein S3 [Methanobrevibacter smithii DSM 2374]
Length = 250
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 7/192 (3%)
Query: 30 GALLHEDLK---IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK 86
+ E LK I EYL+ L++AG + ++ T ++VY+ RPG++IG+ G ++
Sbjct: 4 KDFVTEGLKRTRIDEYLEKELERAGYGGMDVQITPLGTMVVVYAERPGMVIGRGGKNVRA 63
Query: 87 IRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG 145
I L N + V EV PE+N ++A IA L+R + FRR ++ M G
Sbjct: 64 ITNTLKNDFGLDNPQIEVKEVSVPELNPKIMAYKIANMLQRGMHFRRVAYSTIRRIMGAG 123
Query: 146 ADGVKVIASGRLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVS 203
A GV+V SG++ G+ S ++EG + + ++ G A + G GI V +
Sbjct: 124 AQGVEVTISGKIRGS-RSAVAKFVEGYIKKCGEPSIRLVEEGFATVQLKPGVLGIYVRIM 182
Query: 204 LRDEVSDSDSTI 215
+ V I
Sbjct: 183 PPETVLPDSVEI 194
>gi|223927807|gb|ACN23525.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927918|gb|ACN23598.1| ribosomal protein S3 [Halimeda discoidea]
Length = 154
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 38/140 (27%), Positives = 72/140 (51%), Gaps = 9/140 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S W+A +Y + ED +R L +A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKDYSKYVLEDNFVRTLLSKKYNRARFEKIQISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111
+ I++++ +P ++IG+KG ++E +K++ NS++ + +
Sbjct: 61 IEDHLEIVIHAQKPDILIGRKGENLEIFQKQIKTFIFQYRQIEWNSKLKVILYIFRCKTS 120
Query: 112 NATLIAQSIAQQLERRVVFR 131
++ IA I + LE+R+ ++
Sbjct: 121 ASSAIADFIVEHLEKRIPYK 140
>gi|223927980|gb|ACN23639.1| ribosomal protein S3 [Halimeda gigas]
gi|223927983|gb|ACN23641.1| ribosomal protein S3 [Halimeda gigas]
Length = 166
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 45/167 (26%), Positives = 82/167 (49%), Gaps = 13/167 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S W+A Y + ED +R L +A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSHWYASKKYYSKYVLEDHFVRTLLSEKYNRARFEKIQISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111
+ I++Y+ +P ++IGKKG ++E +K++ NS++ + +
Sbjct: 61 IEDHLEIVIYAQKPDILIGKKGENLEIFQKQIKTFIFQYRQIEWNSKLKVILYIFQCKTS 120
Query: 112 NATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155
++ IA I + LE+R+ ++ K+ ++ + G+K+ SG
Sbjct: 121 ASSAIADFIVEHLEKRIPYKVVFTLLKKHLKR-QKQSILGMKIQISG 166
>gi|223927774|gb|ACN23504.1| ribosomal protein S3 [Halimeda cuneata]
Length = 149
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 9/140 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L +A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYVLEDHFVRTLLSQKYNRARFEKIHISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111
+ I++++ +P L+IGKKG ++E +K++ NS + + +
Sbjct: 61 IEDHLEIVIHAQKPDLLIGKKGENLEIFQKQIKKFIFQYRQIEWNSRLKVILYIFRCKTS 120
Query: 112 NATLIAQSIAQQLERRVVFR 131
++ IA I + LE+RV ++
Sbjct: 121 ASSAIADFIVEHLEKRVPYK 140
>gi|223927428|gb|ACN23341.1| ribosomal protein S3 [Halimeda gracilis]
Length = 138
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 43/135 (31%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W++ Y + ED +R LQ +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYS-KKYYSKYVLEDHFLRTILQKKYSRAGFEKIQISRK 59
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
+ I++++ +P ++IGKKG ++E +K++ + + ++ L V K + IA
Sbjct: 60 IENHIEIVIHAQKPDILIGKKGENLELFQKEIKQLLSKKVILYVLRCKKSASS---IADF 116
Query: 120 IAQQLERRVVFRRAM 134
I Q LE+RV ++
Sbjct: 117 IVQNLEKRVPYKLVF 131
>gi|629469|pir||S40457 ribosomal protein S3 - Chlamydomonas reinhardtii chloroplast
gi|460874|gb|AAB29391.1| orf712=ribosomal protein Rps3 homolog [Chlamydomonas reinhardtii,
137c mt+, Peptide Chloroplast, 712 aa]
Length = 712
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 43/115 (37%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
Query: 95 TNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRA----VQSAMRFGADGVK 150
I + A+ +A SI LE+R FR +K+A + + VK
Sbjct: 594 PKISIKFFSVKTTNLLEKASTVADSIVDALEKRKAFRGVIKKAKEDLMLRSRVTRVKVVK 653
Query: 151 VIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+ +GRLNGAE++R+E GRVPLQTLRA+IDY A T YG G+KV++
Sbjct: 654 IQVAGRLNGAEIARSEWVRAGRVPLQTLRANIDYAYRTANTIYGIIGVKVWIFKG 708
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFA--RGSEYGALLHEDLKIREYLQCHLKQ 49
MGQK++P+ FR+G+ S+WFA + Y + ED +R L
Sbjct: 1 MGQKVHPLGFRVGITKKHQSQWFARFQKYAYSQSVFEDHMLRTTLVNLFSN 51
>gi|56180982|gb|AAV83600.1| ribosomal protein S3 [Halimeda discoidea]
Length = 166
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 11/166 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S W+A Y + ED +R L +A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKYYSKYVLEDNFVRTLLSEKYNRARFEKIQISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111
+ I++Y+ +P ++IGKKG ++E +K++ NS++ + +
Sbjct: 61 IEDHLEIVIYAQKPDILIGKKGENLEIFQKQIKTFIFQYRQIEWNSKLKVILYIFRCKTS 120
Query: 112 NATLIAQSIAQQLERRVVFRRAM--KRAVQSAMRFGADGVKVIASG 155
++ IA I + LE+R+ ++ + + G+K+ SG
Sbjct: 121 ASSAIADFIVEHLEKRIPYKVVFTLLKKHLKRKKQSTLGMKIQISG 166
>gi|302749127|gb|ADL64043.1| ribosomal protein S3 [Zelkova serrata]
Length = 470
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ + + + G+ ++ I + + G +++K+R LSN T
Sbjct: 297 KVMKLIDKFIDLGGIGEL---IKGIEMMIEIILRNRIIPYGYNSYLNEVKKMRSLLSNRT 353
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+LIAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 354 NTNTLIESVKIKSVYQSASLIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRI 413
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY +A T YG G+KV++S
Sbjct: 414 CCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYASAEVSTRYGILGVKVWISY 466
>gi|246880795|gb|ACS95107.1| ribosomal protein S3 [Dunaliella salina]
Length = 706
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 47/139 (33%), Positives = 70/139 (50%), Gaps = 13/139 (9%)
Query: 77 IGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKR 136
I K+ + + I + + A+++A S+ LE+R FR+ +K+
Sbjct: 566 IEKQRNMYIDNVQLTPKI---AIKFYSVKEKSVKAKASIVADSVVDALEQRSSFRKIIKK 622
Query: 137 AVQSAMR----------FGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGT 186
A + MR GVK+ SGRLNGAE++R+E GRVPLQTLRA++DY
Sbjct: 623 AKEDLMRSPISSSDGKINRVKGVKIQVSGRLNGAEIARSEWVRAGRVPLQTLRANLDYSY 682
Query: 187 AVAETAYGSCGIKVYVSLR 205
A T YG G+KV++
Sbjct: 683 KTANTIYGIIGVKVWIFKG 701
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 47/123 (38%), Gaps = 5/123 (4%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFA--RGSEYGALLHEDLKIREY---LQCHLKQAGVAKI 55
MGQK++P+ R+G+ S+WFA ++Y + ED +R+ L L K
Sbjct: 1 MGQKVHPLGLRVGITKKHQSQWFARFHKNKYAQSVLEDRMLRQTLTQLFPQLLNPVFKKQ 60
Query: 56 LIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATL 115
+ +I GLI + G I L + + ++ + V + +
Sbjct: 61 RDNESSIAPKITQIKIERGLIPYEIGIQIHAENCDLIKSSIENLKINSDFVSRLQKTRRY 120
Query: 116 IAQ 118
Sbjct: 121 FQH 123
>gi|223927738|gb|ACN23480.1| ribosomal protein S3 [Halimeda cuneata]
Length = 159
Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 80/151 (52%), Gaps = 11/151 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A +Y + ED +R L K+A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKRDYSKYVLEDNFVRTLLSKKYKRAKFEKIHISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN--MTNSEIHLS-----VNEVPKPEIN 112
+ I++++ +P ++IGKK +++ ++++ +I + + + + +IN
Sbjct: 61 IEDHLEIVIHAQKPDILIGKKSENLQTFQQQIKKAIFQYRQIAWNSQLKVIFYIFRCKIN 120
Query: 113 ATLIAQSIAQQLERRVVFRRAM---KRAVQS 140
A+ IA I + LE+RV ++ K+ +Q
Sbjct: 121 ASSIADFIVEHLEKRVPYKVVFVLLKKHLQR 151
>gi|170290796|ref|YP_001737612.1| ribosomal protein S3 [Candidatus Korarchaeum cryptofilum OPF8]
gi|170174876|gb|ACB07929.1| ribosomal protein S3 [Candidatus Korarchaeum cryptofilum OPF8]
Length = 251
Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 43/203 (21%), Positives = 87/203 (42%), Gaps = 7/203 (3%)
Query: 29 YGALLHE---DLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIE 85
Y + E K+ E+++ +AG + I T I VY PG++IG+ G +
Sbjct: 10 YKKFVQEGIVKYKLHEFMEKISDKAGFHGVEISSTPIRDIITVYVESPGVMIGRGGRTSK 69
Query: 86 KIRK-KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRF 144
+I + ++ +V KP ++ ++A IA+++ + +++ A+ M
Sbjct: 70 RISDILKEELGIQNPYIQAKKVDKPFLSTRIVASYIARRIAKGERYKKVAYSALGRVMAE 129
Query: 145 GADGVKVIASGRLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYV 202
GA GV++ SG+ G++ +R E + EG + Q +++Y G G++V +
Sbjct: 130 GAKGVEIRLSGKF-GSQRAREERFREGVIYRCGQDYIENVEYAVKHVLMPQGMIGVRVRI 188
Query: 203 SLRDEVSDSDSTIPAAEHRVVEK 225
I E + +
Sbjct: 189 VKPGVRGPDAVVIKEDEIERIRE 211
>gi|223927912|gb|ACN23594.1| ribosomal protein S3 [Halimeda discoidea]
Length = 149
Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats.
Identities = 38/140 (27%), Positives = 72/140 (51%), Gaps = 9/140 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S W+A +Y + ED +R L +A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKDYSKYVLEDNFVRTLLSKKYNRARFEKIQISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111
+ I++++ +P ++IG+KG ++E +K++ NS++ + +
Sbjct: 61 IEDHLEIVIHAQKPDILIGRKGENLEIFQKQIKTFIFQYRQIEWNSKLKVILYIFRCKTS 120
Query: 112 NATLIAQSIAQQLERRVVFR 131
++ IA I + LE+R+ ++
Sbjct: 121 ASSAIADFIVEHLEKRIPYK 140
>gi|295154448|gb|ADF83133.1| ribosomal protein S3 [Lepturidium insulare]
Length = 166
Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats.
Identities = 48/166 (28%), Positives = 86/166 (51%), Gaps = 17/166 (10%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P T++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPTILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTE 166
A QL+ RV FR+AMK+A++ + GVK+ +GRL G E++R E
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAE 166
>gi|223927915|gb|ACN23596.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927921|gb|ACN23600.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927924|gb|ACN23602.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927927|gb|ACN23604.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927930|gb|ACN23606.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927933|gb|ACN23608.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927936|gb|ACN23610.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927939|gb|ACN23612.1| ribosomal protein S3 [Halimeda discoidea]
Length = 154
Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats.
Identities = 38/140 (27%), Positives = 72/140 (51%), Gaps = 9/140 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S W+A +Y + ED +R L +A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKDYSKYVLEDNFVRTLLSKKYNRARFEKIQISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111
+ I++++ +P ++IG+KG ++E +K++ NS++ + +
Sbjct: 61 IEDHLEIVIHAQKPDILIGRKGENLEIFQKQIKTFIFQYRQIEWNSKLKVILYIFRCKIS 120
Query: 112 NATLIAQSIAQQLERRVVFR 131
++ IA I + LE+R+ ++
Sbjct: 121 ASSAIADFIVEHLEKRIPYK 140
>gi|302748539|gb|ADL63750.1| ribosomal protein S3 [Androsace sarmentosa]
Length = 481
Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats.
Identities = 53/182 (29%), Positives = 90/182 (49%), Gaps = 6/182 (3%)
Query: 27 SEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK 86
+Y LL +D K+ E ++ + G+ ++ I+ II+ + R +++K
Sbjct: 298 RKYWNLLGKD-KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKK 355
Query: 87 IRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---M 142
+R LSN TN+ + ++ +A+ IAQ I+ Q + FR + V+ M
Sbjct: 356 MRSLLSNRTNTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVM 415
Query: 143 RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202
+ G +G+++ SGRL GAE++RTEC G+ IDY A T YG G+KV++
Sbjct: 416 KKGVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWI 475
Query: 203 SL 204
S
Sbjct: 476 SY 477
>gi|302748979|gb|ADL63969.1| ribosomal protein S3 [Qualea sp. Chase 168]
Length = 505
Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats.
Identities = 47/178 (26%), Positives = 85/178 (47%), Gaps = 5/178 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN T +
Sbjct: 323 KVMELIEKFIDLGGIVEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTKT 381
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
++ ++ +A+ IAQ I+ QL + FR + + V+ M+ G +G+++
Sbjct: 382 NTNIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIISKIVKDIPLVMKKGVEGIRICC 441
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
SGR GAE++RTEC G+ IDY A T YG G+KV++ +
Sbjct: 442 SGRSEGAEIARTECVKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWIYYSKKKGGR 499
>gi|302748981|gb|ADL63970.1| ribosomal protein S3 [Quercus alba]
Length = 500
Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
++ E ++ + G+ + I+ II+ + R +++K++ LSN T +
Sbjct: 327 RVMELIEKFIDLGGIGEF-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMQSLLSNKTKT 385
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+LIAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 386 NTLIDSVKIKSVYQSASLIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 445
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 446 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWISY 496
>gi|56181320|gb|AAV83754.1| ribosomal protein S3 [Halimeda incrassata]
Length = 210
Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats.
Identities = 45/193 (23%), Positives = 85/193 (44%), Gaps = 21/193 (10%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60
Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMT----------NSEIHLSVNEVPKP 109
+N I++ +P ++IGKKG +++K+ + + + ++ L V +
Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRASEGQSKPKLFLEVYVIRCQ 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAM-------KRAVQSAMRFGADGVKVIASGRLNGAEL 162
+++ A + + LE+R+ ++ K+ Q + G +A+ +
Sbjct: 121 TGASSI-ADFLVENLEKRIPYKIVFVLLKKHLKKIRQREKALRSSGANAVAAQPSDRTAR 179
Query: 163 SRT--ECYLEGRV 173
+ E E V
Sbjct: 180 THMGPETISERSV 192
>gi|288560114|ref|YP_003423600.1| ribosomal protein S3P Rps3p [Methanobrevibacter ruminantium M1]
gi|288542824|gb|ADC46708.1| ribosomal protein S3P Rps3p [Methanobrevibacter ruminantium M1]
Length = 251
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 55/181 (30%), Positives = 86/181 (47%), Gaps = 4/181 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRK-KLSNMTN 96
+I EYL+ L++AG + I+ T +IVY+ RPG++IG+ G + I + +
Sbjct: 15 RIDEYLEKELERAGYGGMEIQVTPLGTMVIVYAERPGMVIGRGGKTVRAITQSLKTKFDL 74
Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156
+ V EV PE+NA ++A IA L+R + FRR ++ M GA GV+V SG+
Sbjct: 75 DNPQVEVKEVAVPELNARIMASKIANMLQRGMHFRRVAYSTIRKIMGAGAQGVEVTISGK 134
Query: 157 LNGAELSRTECYLEGRVPLQTLRA--HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
+ G+ S + EG + A + G A A G GI V + +
Sbjct: 135 IRGS-RSAVAKFTEGYIKKCGEPATRFVTEGFATAPLKPGVLGIVVRIMPPEATLPDKVD 193
Query: 215 I 215
I
Sbjct: 194 I 194
>gi|223927401|gb|ACN23323.1| ribosomal protein S3 [Halimeda copiosa]
Length = 147
Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats.
Identities = 41/145 (28%), Positives = 73/145 (50%), Gaps = 14/145 (9%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ + S+W+A EY + ED +R L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQSHLSQWYASKKEYSKYVLEDNFLRTILPKKYPKAGFEKIKISRK 60
Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNM----------TNSEIHLSVNEVPKP 109
+ I++++ +PG++IGKKG ++ +K++ +++L V
Sbjct: 61 IEGHIEIVIHAQKPGILIGKKGENLGTFQKEIKKFLSLYNTDSDSQKPKVYLYVIRCKTS 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAM 134
+ IA + + LE+RV ++
Sbjct: 121 ASS---IADFLIENLEKRVPYKLVF 142
>gi|288191154|gb|ADC43930.1| ribosomal protein S3 [Moultonianthus leembruggianus]
Length = 505
Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ I + + G +++K+R LSN T
Sbjct: 330 KVMELIEKFINLGGIGEL---LKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRT 386
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+LIAQ I+ QL + FR + V+ M G +G+++
Sbjct: 387 NTNTLIESVKIQSVYQSASLIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMTKGVEGIRI 446
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++R+EC G+ IDY A T YG G+KV++S
Sbjct: 447 CCSGRLEGAEIARSECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWISY 499
>gi|302748903|gb|ADL63931.1| ribosomal protein S3 [Nitraria retusa]
Length = 503
Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats.
Identities = 51/180 (28%), Positives = 85/180 (47%), Gaps = 9/180 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ T I + G+ G +++K+R LSN T
Sbjct: 322 KVMELIEKFINLGGIGEL---ITGIEMMIEIILRNRGIPYGYNSYLNEVKKMRSLLSNRT 378
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ QL +R FR + V+ M G +G+++
Sbjct: 379 NTNTLIESVKIKSVYQSASPIAQDISFQLRNKRRSFRSIFSQIVKDIPLVMNKGVEGIRI 438
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
SGRL GAE++RTEC G+ IDY A T YG G+KV++S +
Sbjct: 439 CCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISYSKKKGGR 498
>gi|300521570|gb|ADK25996.1| r-protein S3p [Candidatus Nitrososphaera gargensis]
Length = 236
Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats.
Identities = 57/193 (29%), Positives = 93/193 (48%), Gaps = 9/193 (4%)
Query: 26 GSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIE 85
+ + + ++ E+L LK AG + +++T RI +Y RPGL+IG+KGT I+
Sbjct: 9 KNNFRNM-----ELNEFLADALKDAGYGGVEVQKTPVGARITIYVTRPGLVIGRKGTGIK 63
Query: 86 K-IRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRF 144
+ K +SV EV PE+N ++ IAQ +ER FRRA ++ + M
Sbjct: 64 DLMTKIEQKFGLQNPQISVLEVTNPELNPHIMCNRIAQLIERGTAFRRAAMWSLNTIMNA 123
Query: 145 GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYV 202
GA GV+V+ SG+L E + E + G VP A + G + T G GI++ +
Sbjct: 124 GALGVEVVISGKLR-TERAHFEKHTIGVVPKSGDIAGQIVTTGVSHVLTKMGLMGIQLRI 182
Query: 203 SLRDEVSDSDSTI 215
+ + +
Sbjct: 183 ASKAALPQEFELK 195
>gi|288191289|gb|ADC43997.1| ribosomal protein S3 [Afrostyrax sp. Cheek 5007]
Length = 507
Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats.
Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 332 KVMELIEKLINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 390
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 391 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 450
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 451 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWISY 501
>gi|302748647|gb|ADL63804.1| ribosomal protein S3 [Chrysolepis sempervirens]
Length = 500
Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
++ E ++ + G+ + I+ II+ + R +++K+R LSN T +
Sbjct: 327 RVMELIEKFIDLGGIGEF-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTKT 385
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+LIAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 386 NTLIESVKIKSVYQSASLIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 445
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 446 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWISY 496
>gi|223927909|gb|ACN23592.1| ribosomal protein S3 [Halimeda discoidea]
Length = 149
Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats.
Identities = 38/140 (27%), Positives = 72/140 (51%), Gaps = 9/140 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S W+A +Y + ED +R L +A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKDYSKYVLEDNFVRTLLSKKYNRARFEKIQISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111
+ I++++ +P ++IG+KG ++E +K++ NS++ + +
Sbjct: 61 IEDHLEIVIHAQKPDILIGRKGENLEIFQKQIKTFIFQYRQIEWNSKLKVILYIFRCKIS 120
Query: 112 NATLIAQSIAQQLERRVVFR 131
++ IA I + LE+R+ ++
Sbjct: 121 ASSAIADFIVEHLEKRIPYK 140
>gi|56181000|gb|AAV83612.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927944|gb|ACN23615.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927947|gb|ACN23617.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927950|gb|ACN23619.1| ribosomal protein S3 [Halimeda discoidea]
Length = 165
Score = 108 bits (270), Expect = 7e-22, Method: Composition-based stats.
Identities = 46/166 (27%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L K+A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKRYYSKYVLEDHFVRTILSEKYKRAKFEKIHISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN-------MTNSEIHLSVNEVPKPEIN 112
+ I++++ +P ++IGKK ++ +K++ + + + + + +I+
Sbjct: 61 IEDHLEIVIHAQKPDILIGKKSETLKSFQKQIKKYIFQYRQIEWNSKLKVIVYIFRSKIH 120
Query: 113 ATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155
A+ IA I + LE+RV ++ K+ +Q + A G+K+ SG
Sbjct: 121 ASSIADFIVEHLEKRVPYKVVFVLLKKHLQR-QKHSALGMKIQISG 165
>gi|302749049|gb|ADL64004.1| ribosomal protein S3 [Stachyurus praecox]
Length = 501
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 327 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 385
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 386 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKDIPLVMKKGVEGIRICC 445
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 446 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWISY 496
>gi|291334067|gb|ADD93740.1| hypothetical protein [uncultured marine bacterium
MedDCM-OCT-S05-C114]
Length = 99
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 38/85 (44%), Positives = 59/85 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI FRLGV W++RW+A +Y + ED IR +L+ L+ A V +I+IER
Sbjct: 1 MGQKVNPIGFRLGVRRNWSARWYANKKDYSQFMEEDNMIRGFLEKKLRYASVPRIVIERA 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIE 85
R+ +++ARPG++IG+KG +++
Sbjct: 61 STRTRVTIWTARPGIVIGRKGQELD 85
>gi|288191223|gb|ADC43964.1| ribosomal protein S3 [Tetracoccus dioicus]
Length = 505
Score = 108 bits (269), Expect = 8e-22, Method: Composition-based stats.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 330 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 388
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAM---KRAVQSAMRFGADGVKVIA 153
+ ++ +A+LIAQ I+ QL + FR + + M+ G +G+++
Sbjct: 389 NTLIESVKIKSVYQSASLIAQDISFQLRNKTRSFRSIFSILVKNIPLVMKKGVEGIRICC 448
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 449 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 499
>gi|56181282|gb|AAV83735.1| ribosomal protein S3 [Halimeda incrassata]
Length = 225
Score = 108 bits (269), Expect = 8e-22, Method: Composition-based stats.
Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 17/177 (9%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+ P+ FRLG+ S+W+A Y L ED +R L +AG I I R
Sbjct: 1 MGQKVXPLGFRLGITQPHLSQWYASKKYYSKYLXEDHFLRTILPKKYAKAGFENINISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATL-- 115
+ I++ + +P ++IGKKG +++ +K++ + ++ S N KP++ L
Sbjct: 61 IENHIEIVIRAQKPEILIGKKGENLKNFQKEIKKLIFKYRGLNQSRNAQSKPKLRVILHV 120
Query: 116 ---------IAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASGRLNGA 160
IA + + LE+R+ ++ K+ ++ + S ++ +
Sbjct: 121 IRCQTGASSIADFLVENLEKRIPYKIVFVLLKKHLKKIRQRERALRSSAVSTSIDSS 177
>gi|302748567|gb|ADL63764.1| ribosomal protein S3 [Barbeuia madagascariensis]
Length = 497
Score = 108 bits (269), Expect = 8e-22, Method: Composition-based stats.
Identities = 51/171 (29%), Positives = 89/171 (52%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ + ++ + G+ + LI+ II+ + R +++K+R LSN TN+
Sbjct: 325 KVMKLIEKFIDLGGI-RELIKGIEMMIEIILKNRRIPYGYNSYLNEVKKMRSLLSNRTNT 383
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + +R FR + V++ M+ G +G+++
Sbjct: 384 NTLIESVKIKSVYQSASPIAQDISFQPKNKRRSFRSIFSKIVKNIPLVMKKGVEGIRICC 443
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ L IDY +A T YG G+KV++S
Sbjct: 444 SGRLEGAEIARTECGKYGKTSCNVLHQKIDYASAEVSTRYGILGVKVWISY 494
>gi|299830451|ref|YP_003734822.1| ribosomal protein S3 [Pythium ultimum]
gi|299830488|ref|YP_003734859.1| ribosomal protein S3 [Pythium ultimum]
gi|269810828|gb|ACZ43857.1| ribosomal protein S3 [Pythium ultimum]
gi|269810865|gb|ACZ43894.1| ribosomal protein S3 [Pythium ultimum]
Length = 251
Score = 108 bits (269), Expect = 9e-22, Method: Composition-based stats.
Identities = 65/249 (26%), Positives = 104/249 (41%), Gaps = 44/249 (17%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--HLKQAGVAKILIE 58
MGQKI PI RL N W+S+W +EY LLH DL+IR+Y + + K + K+
Sbjct: 1 MGQKIIPISLRLNKNENWHSKWIVEKNEYSNLLHFDLEIRKYFENIFNYKNLKLIKLNTV 60
Query: 59 RTHKNCRIIVYSARPGLIIGK--------------KGTDIEKIRK--------------- 89
+T KN I +Y + + K +I+ K
Sbjct: 61 KTSKNINIYIYVRQHSKNFYRLPYNKIINHLNLYYKNNNIKLFVKNVKLKDLKILKKKLG 120
Query: 90 ------KLSNMTNSEIHLSVNEVPK--PEINATLIAQSIAQQLERRVVFRRAMKRAVQSA 141
K +N N ++ + N +I+ I Q LER+ ++ +K
Sbjct: 121 RIFRFIKKNNKINKDVKKMIYNFSYALYTKNINMISYYIKQSLERKKSHKKYIKNINNIL 180
Query: 142 MRFGAD-----GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196
F G ++ GRLNG++ + Y +G++PL +L+ I Y +T G C
Sbjct: 181 QEFFRMFSNFIGYRLQFKGRLNGSKRKKKLVYQKGKIPLNSLKYDIKYHFNEFKTPSGIC 240
Query: 197 GIKVYVSLR 205
IK++V L+
Sbjct: 241 SIKLWVFLK 249
>gi|223927741|gb|ACN23482.1| ribosomal protein S3 [Halimeda cuneata]
Length = 162
Score = 107 bits (268), Expect = 9e-22, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 80/151 (52%), Gaps = 11/151 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A +Y + ED +R L K+A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKRDYSKYVLEDNFVRTLLSKKYKRAKFEKIHISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN--MTNSEIHLS-----VNEVPKPEIN 112
+ I++++ +P ++IGKK +++ ++++ +I + + + + +IN
Sbjct: 61 IEDHLEIVIHAQKPDILIGKKSENLQTFQQQIKKAIFQYRQIAWNSQLKVIFYIFRCKIN 120
Query: 113 ATLIAQSIAQQLERRVVFRRAM---KRAVQS 140
A+ IA I + LE+RV ++ K+ +Q
Sbjct: 121 ASSIADFIVEHLEKRVPYKVVFVLLKKHLQR 151
>gi|56181300|gb|AAV83744.1| ribosomal protein S3 [Halimeda incrassata]
Length = 219
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 77/158 (48%), Gaps = 15/158 (9%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60
Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMT----------NSEIHLSVNEVPKP 109
+N I++ +P ++IGKKG +++K+ + + + ++ L V +
Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRASERQSKPKLFLEVYVIRCQ 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144
+++ A + + LE+R+ ++ K+ ++ +
Sbjct: 121 TGASSI-ADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 157
>gi|150399466|ref|YP_001323233.1| 30S ribosomal protein S3P [Methanococcus vannielii SB]
gi|171460840|sp|A6UQ49|RS3_METVS RecName: Full=30S ribosomal protein S3P
gi|150012169|gb|ABR54621.1| ribosomal protein S3 [Methanococcus vannielii SB]
Length = 211
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 55/201 (27%), Positives = 100/201 (49%), Gaps = 9/201 (4%)
Query: 30 GALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT---DIEK 86
+ E L I EY + L +AG + + +++T RI V++ +PG +IG+KG ++
Sbjct: 8 AENVSETL-IDEYFKGKLVRAGYSHLELKKTPIGTRITVFAEKPGFVIGRKGKMVKELTD 66
Query: 87 IRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGA 146
++ + N +I + E P+++ ++ IA LE+ + FR+ AV+ M GA
Sbjct: 67 TLTEVYKVENPQIEVKPLE--TPDLDPAIVGHKIAASLEKGMHFRKTAHSAVRRVMAAGA 124
Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSL 204
GV +I SG+L+G E SRTE +++G + A + +A+ G G+ V +
Sbjct: 125 KGVAIIISGKLSG-ERSRTEKFMDGYMKHCGEPAEELVIKSHQLAKLKLGIVGVTVKIMR 183
Query: 205 RDEVSDSDSTIPAAEHRVVEK 225
D + I + E + V +
Sbjct: 184 PDVSLPDEIIILSGEIKEVTE 204
>gi|56181003|gb|AAV83614.1| ribosomal protein S3 [Halimeda discoidea]
gi|56181006|gb|AAV83616.1| ribosomal protein S3 [Halimeda discoidea]
Length = 165
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 46/166 (27%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L K+A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFVRTILSEKYKRAKFVKIHISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN-------MTNSEIHLSVNEVPKPEIN 112
+ I++++ +P ++IGKK ++ +K++ + + + + + +I+
Sbjct: 61 IEDHFEIVIHAQKPEILIGKKSETLKNFQKQIKKFIFQYRQIEWNSKLKVIVYIFRCKIH 120
Query: 113 ATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155
A+ IA I + LE+RV ++ K+ +Q + A G+K+ SG
Sbjct: 121 ASSIADFIVEHLEKRVPYKVVFVLLKKHLQR-QKHSALGMKIQISG 165
>gi|269812141|gb|ACZ44439.1| ribosomal protein S3 [Pythium ultimum]
gi|269812178|gb|ACZ44476.1| ribosomal protein S3 [Pythium ultimum]
Length = 251
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 65/249 (26%), Positives = 103/249 (41%), Gaps = 44/249 (17%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--HLKQAGVAKILIE 58
MGQKI PI RL N W+S+W +EY LLH DL+IR+Y + + K + K+
Sbjct: 1 MGQKIIPISLRLNKNENWHSKWIVEKNEYSNLLHFDLEIRKYFENIFNYKNLKLIKLNTV 60
Query: 59 RTHKNCRIIVYSARPGLIIGK--------------KGTDIEKIRK--------------- 89
+T KN I +Y + + K +I+ K
Sbjct: 61 KTSKNINIYIYVRQHSKNFYRLPYNKIINHLNLYYKNNNIKLFVKNVKLKDLKILKKKLG 120
Query: 90 ------KLSNMTNSEIHLSVNEVPK--PEINATLIAQSIAQQLERRVVFRRAMKRAVQSA 141
K +N N ++ + N +I+ I Q LER+ ++ +K
Sbjct: 121 RIFRFIKKNNKINKDVKKMIYNFSYALYTKNINMISYYIKQSLERKKSHKKYIKNINNIL 180
Query: 142 MRFGAD-----GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196
F G ++ GRLNG++ + Y +G++PL +L+ I Y +T G C
Sbjct: 181 QEFFRMFSNFIGYRLQFKGRLNGSKRKKKLVYQKGKIPLNSLKYDIKYHFNEFKTPSGIC 240
Query: 197 GIKVYVSLR 205
IK +V L+
Sbjct: 241 SIKFWVFLK 249
>gi|223927395|gb|ACN23319.1| ribosomal protein S3 [Halimeda fragilis]
Length = 183
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 49/183 (26%), Positives = 80/183 (43%), Gaps = 26/183 (14%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++PI FRLG+ S+W+A Y + ED +R L+ +AG KI I R
Sbjct: 1 MGQKVHPIGFRLGITQLHLSQWYASKKYYSKYVLEDHFLRTILKKQYAKAGFEKIEISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTD---IEKIRKKLSNMTN-------------------- 96
+ I+++ +P ++IGKKG ++I+K +
Sbjct: 61 IENHIEIVIHVQKPAVLIGKKGPTEGLQKEIKKLIFKYRGLSSGFNEPNQGPNDNDLKRL 120
Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGAD--GVKVIAS 154
+ + K +A+ IA I + LE+RV ++ ++ G+KV S
Sbjct: 121 KVVLYVIKCKTKTNASASSIADFIIENLEKRVPYKIVFVLLKKNLKYNDQKPLGMKVQIS 180
Query: 155 GRL 157
GRL
Sbjct: 181 GRL 183
>gi|288191114|gb|ADC43910.1| ribosomal protein S3 [Hydnocarpus sp. Chase 1301]
Length = 505
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 330 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 388
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + ++ M+ G +G+++
Sbjct: 389 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIIKDIPLVMKKGVEGIRICC 448
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 449 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWISY 499
>gi|56181350|gb|AAV83769.1| ribosomal protein S3 [Halimeda simulans]
Length = 275
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 76/166 (45%), Gaps = 23/166 (13%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y L ED + L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDHFLXTILPKQYAKAGFEKIEISRK 60
Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNMT------------------NSEIHL 101
+N I++ +P ++IGKKG +++K+ + + + ++ L
Sbjct: 61 IENHLEIVIRVQKPEVLIGKKGENLKKLLESIKKLILKYRAPKAPAAGELGGQSKPKLFL 120
Query: 102 SVNEVPKPEINATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRF 144
V + +++ A + + LE+R+ ++ K+ ++ +
Sbjct: 121 EVYVIRCQTGASSI-ADFLVENLEKRIPYKIVFVLLKKHLKKIRQR 165
>gi|156937383|ref|YP_001435179.1| SSU ribosomal protein S3P [Ignicoccus hospitalis KIN4/I]
gi|172044464|sp|A8AA20|RS3_IGNH4 RecName: Full=30S ribosomal protein S3P
gi|156566367|gb|ABU81772.1| SSU ribosomal protein S3P [Ignicoccus hospitalis KIN4/I]
Length = 241
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 61/205 (29%), Positives = 100/205 (48%), Gaps = 12/205 (5%)
Query: 26 GSEYGALLHED----LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKG 81
E +K+ EYL G +K+ +++T R+I+Y+ R G IIG++G
Sbjct: 5 KKNIKKYFLEQALTQVKVDEYLAYKFHSVGYSKVELQKTPMGTRVIIYAERSGAIIGRRG 64
Query: 82 TDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I++I K L ++V +V +PE++A ++A +A L+R FRRA ++
Sbjct: 65 QTIKQITKVLEEWFGIPNPQVTVVKVEEPELDARVMAFRLANALQRGFHFRRAAYTTLRR 124
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRVPL---QTLRAHIDYGTAVAETAYGSCG 197
M GA G +V SG+L G E +R E Y+ G+V Q +R D A G G
Sbjct: 125 IMGAGAIGAQVKVSGKLRG-ERARFEKYIAGKVYKSGNQVVRLT-DRAIAHVLLKVGVEG 182
Query: 198 IKVYVSLR--DEVSDSDSTIPAAEH 220
++V +S + +E D + I + E
Sbjct: 183 VEVIISKKSEEERPDDEVRIKSPEE 207
>gi|223927883|gb|ACN23575.1| ribosomal protein S3 [Halimeda discoidea]
Length = 157
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 39/140 (27%), Positives = 71/140 (50%), Gaps = 9/140 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S W+A Y + ED +R L +A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKYYSKYVLEDNFVRTLLSEKYSRARFEKIQISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111
+ I++++ +P ++IGKKG ++E +K++ NS++ + +
Sbjct: 61 IEDHLEIVIHAQKPDILIGKKGENLEIFQKQIKTFIFQYRQIEWNSKLKVILYIFRCKTS 120
Query: 112 NATLIAQSIAQQLERRVVFR 131
++ IA I + LE+R+ ++
Sbjct: 121 ASSAIADFIVEHLEKRIPYK 140
>gi|302748826|gb|ADL63893.1| ribosomal protein S3 [Ixonanthes icosandra]
Length = 500
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 325 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 383
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + ++ M+ G +G+++
Sbjct: 384 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIIKDIPLVMKKGVEGIRICC 443
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 444 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWISY 494
>gi|1173301|sp|P27754|RT03_OENBE RecName: Full=Ribosomal protein S3, mitochondrial
gi|632234|pir||S43767 ribosomal protein S3 - evening primrose mitochondrion
gi|13191|emb|CAA48894.1| ribosomal protein S3 [Oenothera berteroana]
Length = 550
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN T +
Sbjct: 379 KVMELIEKFIDLGGIGEL-IKGIEIMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTKT 437
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q +R FR + V+ M+ G +G+++
Sbjct: 438 NTIIESVKIKSVYQSASPIAQDISFQPRNKRRSFRSIFSQIVKDIPLVMKKGVEGIRICC 497
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 498 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWISY 548
Score = 48.5 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 40/101 (39%), Gaps = 9/101 (8%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54
M +K NPI RL +N + +S WF+ YG +++D+ +R Y + +
Sbjct: 1 MARKGNPISVRLDLNRSSDSSWFSDYY-YGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGR 59
Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95
+I K R ++ P K + K+ +
Sbjct: 60 CIILHFPK--RTFIHFFLPRRPRRLKRGKKSRPGKEKARWW 98
>gi|9695403|ref|NP_037625.1| ribosomal protein S3 [Phytophthora infestans]
gi|6692655|gb|AAF24798.1|U17009_31 ribosomal protein S3 [Phytophthora infestans]
gi|58202000|gb|AAW67055.1| ribosomal protein S3 [Phytophthora infestans]
gi|58202047|gb|AAW67101.1| ribosomal protein S3 [Phytophthora infestans]
Length = 267
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 58/249 (23%), Positives = 93/249 (37%), Gaps = 44/249 (17%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--HLKQAGVAKILIE 58
MGQKI PI RL WNS+W +EY LLH DL+I++Y + + K + I I
Sbjct: 1 MGQKIIPISLRLNKKKNWNSKWIVNDNEYSNLLHFDLEIKKYFENIFNYKNLKLIDINII 60
Query: 59 RTHKNCRIIVYSARPGLIIGK-----------------------KGTDIEKIRKKLSNM- 94
+T N + +Y + K K + K N+
Sbjct: 61 KTSNNINVYIYIQKNAKKYYKLSYNKLINNLNIYYPNNNIKLFIKNIQFFEFIKLRKNLK 120
Query: 95 -------------TNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSA 141
N + + N +I I Q LER+ ++ +
Sbjct: 121 KIFDKIKKKNRINKNVKKMIYNFSYAFYTKNINIITFYIKQTLERKKTHKKFINNIDNML 180
Query: 142 MRFGAD-----GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196
F G ++ GRLN ++ + + +G++PL TL I Y +T G C
Sbjct: 181 QEFFQMFSNFIGYRLQFKGRLNKSKRKKKMNFQKGKIPLNTLDYDIKYHFNEFKTPSGIC 240
Query: 197 GIKVYVSLR 205
IK+++ +
Sbjct: 241 SIKLWIFFK 249
>gi|302748681|gb|ADL63821.1| ribosomal protein S3 [Cucurbita pepo]
Length = 509
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 6/182 (3%)
Query: 34 HEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN 93
ED I E ++ + G+ ++ I+ II+ + R +++K+R LSN
Sbjct: 324 KEDKVI-ELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVQKMRSLLSN 381
Query: 94 MTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGV 149
T + + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+
Sbjct: 382 RTKTNTLIESVKIQSVYQSASPIAQDISFQLRNKTRSFRSIFTKIVKDIPFGMKKGVEGI 441
Query: 150 KVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVS 209
++ SGR GAE++RTEC G+ IDY A T YG G+KV++S + +
Sbjct: 442 RICCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWISYKKQKK 501
Query: 210 DS 211
Sbjct: 502 GR 503
>gi|56180898|gb|AAV83544.1| ribosomal protein S3 [Halimeda cuneata]
gi|56180901|gb|AAV83546.1| ribosomal protein S3 [Halimeda cuneata]
gi|56180904|gb|AAV83548.1| ribosomal protein S3 [Halimeda cuneata]
Length = 166
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 11/166 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FR+G+ S W+A Y + ED +R L +A KI I R
Sbjct: 1 MGQKVHPLGFRVGITQPHLSHWYASKKYYSKYVLEDHFVRTVLSEKYTRARFEKIQISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111
+ I++++ +P ++IGKKG +++ +K++ NS++ + +
Sbjct: 61 IEDHLEIVIHAQKPDILIGKKGENLKIFQKQIKTFIFQYRQIEWNSKLKVILYIYRCKTS 120
Query: 112 NATLIAQSIAQQLERRVVFRRAM--KRAVQSAMRFGADGVKVIASG 155
++ IA I + LERR+ ++ + + G+K+ SG
Sbjct: 121 ASSAIADFIVEHLERRIPYKVVFTLLKKHLKRKKQSTLGMKIQISG 166
>gi|323149030|ref|YP_004222806.1| ribosomal protein S3 [Vigna radiata]
gi|308206736|gb|ADO19873.1| ribosomal protein S3 [Vigna radiata]
Length = 563
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 11/189 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + + + I + + G +++K+R LSN T
Sbjct: 378 KVMELIEKFIDLGRIGE---WIKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRT 434
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLER-----RVVFRRAMKRAVQSAMRFGADGVK 150
N+ + ++ +A+ IAQ I+ QL + R +F R +K + M+ G +G++
Sbjct: 435 NTNTLIESVKIKSVYQSASPIAQDISFQLRKKTRSFRSIFSRIVKD-IPLVMKKGVEGIR 493
Query: 151 VIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210
+ SGR GAE++RTEC G+ IDY +A T YG G+KV++S +
Sbjct: 494 ICCSGRSEGAEIARTECGKYGKTSHNVFNQKIDYASAEVSTRYGISGVKVWISYSKKKKG 553
Query: 211 SDSTIPAAE 219
+ E
Sbjct: 554 GRAISETYE 562
>gi|54606724|dbj|BAD66747.1| ribosomal protein S3 [Beta vulgaris subsp. vulgaris]
gi|54606764|dbj|BAD66787.1| ribosomal protein S3 [Beta vulgaris subsp. vulgaris]
Length = 551
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 51/171 (29%), Positives = 88/171 (51%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ + ++ + G+ + LI+ II+ + R +++K+R LSN TN+
Sbjct: 379 KVMKLIEKFIDLGGI-RELIKGIEMMIEIILKNRRIPYGSNSYLNEVKKMRSLLSNRTNT 437
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLER-RVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q ++ R FR + V+ M+ G +G+++
Sbjct: 438 NTLIESVKIKSVYQSASPIAQDISFQPKKKRGSFRSIFSKIVKKIPLVMKRGVEGIRICC 497
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ L IDY +A T YG G+KV++S
Sbjct: 498 SGRLEGAEIARTECGKYGKTSCNVLHQKIDYASAEVSTRYGIVGVKVWISY 548
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 5/76 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
M +K NPI RL +N + +S WF YG L+++D+ +R Y L
Sbjct: 1 MARKGNPISVRLDLNRSSDSSWF-NDYYYGKLVYQDINLRSYF----GSIRPPTRLTFGF 55
Query: 61 HKNCRIIVYSARPGLI 76
II++ + I
Sbjct: 56 RLGRCIIIHFQKRTFI 71
>gi|288191303|gb|ADC44004.1| ribosomal protein S3 [Fagus grandifolia]
Length = 494
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 47/170 (27%), Positives = 84/170 (49%), Gaps = 5/170 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
++ E+++ + G+ ++ I+ II+ + R +++K+R LSN T +
Sbjct: 326 RVMEFIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTKT 384
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 385 NTFIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 444
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 445 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWIS 494
>gi|56180991|gb|AAV83606.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927953|gb|ACN23621.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927956|gb|ACN23623.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927959|gb|ACN23625.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927962|gb|ACN23627.1| ribosomal protein S3 [Halimeda discoidea]
gi|223927965|gb|ACN23629.1| ribosomal protein S3 [Halimeda discoidea]
Length = 165
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 46/166 (27%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L K+A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKRYYSKYVLEDHFVRTILSEKYKRAKFEKIHISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN-------MTNSEIHLSVNEVPKPEIN 112
+ I++++ +P ++IGKK ++ +K++ + + + + + +I+
Sbjct: 61 IEDHLEIVIHAQKPDILIGKKSETLKSFQKQIKKYIFQYRQIEWNSKLKVIVYIFRCKIH 120
Query: 113 ATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155
A+ IA I + LE+RV ++ K+ +Q + A G+K+ SG
Sbjct: 121 ASSIADFIVEHLEKRVPYKVVFVLLKKHLQR-QKHSALGMKIQISG 165
>gi|288191174|gb|ADC43940.1| ribosomal protein S3 [Sacoglottis gabonensis]
Length = 498
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 323 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 381
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 382 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 441
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 442 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 492
>gi|272716766|gb|ACZ95686.1| ribosomal protein S3 [Zamia furfuracea]
Length = 573
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 51/173 (29%), Positives = 78/173 (45%), Gaps = 4/173 (2%)
Query: 43 LQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLS 102
L L G LI+ II+ + R +++K+R LS+ TN+ +
Sbjct: 392 LMEKLIDLGGIGELIKGIGMMIEIILRNRRIPYGYNYYLNEVQKMRSLLSDGTNTNTLIG 451
Query: 103 VNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQS---AMRFGADGVKVIASGRLN 158
++ +A+LIAQ I+ QL FR + V+ M G+++ SGRL
Sbjct: 452 SVKIESVYQSASLIAQDISFQLRNGTGSFRSIFGQIVRDMTCVMPKRVKGIRICCSGRLK 511
Query: 159 GAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
GAE++RTEC G+ IDY A T YG G+KV++S +E
Sbjct: 512 GAEIARTECREYGKTSCNVFHQKIDYAFAKVYTRYGILGVKVWISYSNERKGR 564
Score = 50.0 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/89 (22%), Positives = 41/89 (46%), Gaps = 7/89 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54
M +++NPI RL +N + +S WF+ YG L+++D+ +R+Y + +
Sbjct: 1 MAREVNPISVRLNLNRSSDSSWFSDYY-YGRLVYQDVNLRDYFGSIRPPTRKTFGFRLGR 59
Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTD 83
++ K I + R + ++G
Sbjct: 60 CIVHHFPKRTFIHFFLPRRPRRLKRRGKS 88
>gi|288191295|gb|ADC44000.1| ribosomal protein S3 [Krameria lanceolata]
Length = 499
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E+++ + G+ ++ I + + + G +++K+R LSN T
Sbjct: 327 KVMEFIEKFIDLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEVQKMRSLLSNRT 383
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
+ + ++ +A+ IAQ I+ QL + FR + V+ M+ G G+++
Sbjct: 384 KTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVGGIRI 443
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 444 CCSGRSEGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGILGVKVWISY 496
>gi|302748651|gb|ADL63806.1| ribosomal protein S3 [Citrus limon]
Length = 504
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 50/178 (28%), Positives = 85/178 (47%), Gaps = 5/178 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 322 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 380
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M G +G+++
Sbjct: 381 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMNKGVEGIRICC 440
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
SGRL GAE++RTEC G+ IDY A T YG G+KV++S +
Sbjct: 441 SGRLEGAEIARTECGKYGKTSCNVFHQKIDYAPAEVSTRYGISGVKVWISYSKKKGGR 498
>gi|302748869|gb|ADL63914.1| ribosomal protein S3 [Medicago sativa]
Length = 501
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 48/184 (26%), Positives = 87/184 (47%), Gaps = 5/184 (2%)
Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90
L+ +D I E+++ + + ++ I+ II+ + R +++K+R
Sbjct: 314 KLMVKDKVI-EFIEKFIDLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSL 371
Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSAMRFGADG- 148
LSN TN+ + ++ +A+ IAQ I+ QL ++ FR ++ V+ G
Sbjct: 372 LSNRTNTNTLIESVKIKSVYQSASPIAQDISFQLRKKTRSFRSIFRKIVKDIPLVMKKGV 431
Query: 149 -VKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
+++ SGR GAE++RTEC G+ IDY +A T YG G+KV++S +
Sbjct: 432 GIRICCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYASAEVSTRYGISGVKVWISYSKK 491
Query: 208 VSDS 211
Sbjct: 492 KGGR 495
>gi|302748671|gb|ADL63816.1| ribosomal protein S3 [Couroupita guianensis]
Length = 450
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 50/180 (27%), Positives = 86/180 (47%), Gaps = 10/180 (5%)
Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIR 88
LL +D K+ E + + G+ ++ I + + + G +++K+R
Sbjct: 271 NLLGKD-KVMELIDKFIDLGGIGEL---IKGIEMMIEIILRKRIIPYGYNSYLNEVKKMR 326
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRF 144
LSN TN+ + ++ +A+ IAQ I+ Q ++ FR + V+ M+
Sbjct: 327 SLLSNRTNTNTLIESVKIKSVYQSASPIAQDISFQPRKKTRSFRSIFSKIVKDIPLVMKK 386
Query: 145 GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
G +G+++ SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 387 GVEGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWISY 446
>gi|302749079|gb|ADL64019.1| ribosomal protein S3 [Ternstroemia stahlii]
Length = 483
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 51/180 (28%), Positives = 88/180 (48%), Gaps = 10/180 (5%)
Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIR 88
LL +D K+ E+++ + G+ ++ I + + G +++K+R
Sbjct: 304 NLLGKD-KVMEWIEKFIDLGGIGEL---IKGIEMMIEIILRNRIIPYGYNSYLNEVKKMR 359
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQL-ERRVVFRRAMKRAVQSA---MRF 144
LSN TN+ + ++ +A+ IAQ I+ Q ++R FR + V+ M+
Sbjct: 360 SLLSNRTNTNTLIESVKIKSVYQSASPIAQDISFQPRKKRRSFRSIFSKIVKDIPLGMKK 419
Query: 145 GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
G +G+++ SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 420 GVEGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 479
>gi|323649895|ref|YP_004237268.1| ribosomal protein S3 [Ricinus communis]
gi|322394275|gb|ADW96032.1| ribosomal protein S3 [Ricinus communis]
Length = 563
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 5/178 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 379 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 437
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 438 NTLIESIKMKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 497
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
SGRL GAE++RTEC G+ IDY A T YG G+KV++S +
Sbjct: 498 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISYSKKKGGH 555
>gi|302748832|gb|ADL63896.1| ribosomal protein S3 [Krameria lanceolata]
Length = 495
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E+++ + G+ ++ I + + + G +++K+R LSN T
Sbjct: 322 KVMEFIEKFIDLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEVQKMRSLLSNRT 378
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
+ + ++ +A+ IAQ I+ QL + FR + V+ M+ G G+++
Sbjct: 379 KTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVGGIRI 438
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 439 CCSGRSEGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGILGVKVWISY 491
>gi|302748571|gb|ADL63766.1| ribosomal protein S3 [Batis maritima]
Length = 510
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 50/178 (28%), Positives = 85/178 (47%), Gaps = 5/178 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + +++K+R LSN TN+
Sbjct: 328 KVMELIEKFINLGGIEEL-IKGIEMMIEIILRNRSIPYGYNSYLNEVKKMRSLLSNRTNT 386
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A IAQ I+ QL +R FR + V+ M+ G +G+++
Sbjct: 387 NTLIESVKIKSVYQSAAPIAQDISFQLRNKRRSFRSIFSKIVKDIPFVMKKGVEGIRICC 446
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
SGRL GAE++RTEC G+ IDY A T YG G+KV++S +
Sbjct: 447 SGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISYSKKKGGR 504
>gi|288191156|gb|ADC43931.1| ribosomal protein S3 [Omphalea diandra]
Length = 516
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 341 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 399
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 400 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 459
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 460 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 510
>gi|197131494|gb|ACH47265.1| ribosomal protein S3 [Erodium chrysanthum]
Length = 289
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 79/142 (55%), Gaps = 1/142 (0%)
Query: 63 NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQ 122
+ + ++ ++++ +K+ + ++ +S+ + KP+ + T++A A
Sbjct: 140 KRKFHLKENVKLQVLRSGKLNLKENVEKVLHGEKRKLKISIFALEKPDGDPTILAAFFAN 199
Query: 123 QLERRVVFRRAMKRAVQSAMRFGA-DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH 181
QL+ R+ FR+AM++ ++ A G G++V +GR+ G E++R E +GRV LQT+R
Sbjct: 200 QLKSRIPFRKAMQQTMKRAEEEGRARGIQVQLAGRIEGKEIARVEWLRKGRVSLQTIRRK 259
Query: 182 IDYGTAVAETAYGSCGIKVYVS 203
ID+ + T +G GIK+++
Sbjct: 260 IDFCSTTVRTIHGVLGIKIWLF 281
Score = 91.6 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG--------- 51
MGQKINP+ FRLG +S WF + EY L ED KIR+ +Q +
Sbjct: 1 MGQKINPLGFRLGTTQEHHSIWFEQPKEYCEGLQEDQKIRDCIQNFIDNRRRRFPPTIEL 60
Query: 52 VAKILIERTHKNCRIIVYSARPGL 75
+++I IE+ +I+Y P
Sbjct: 61 ISRIQIEKGTDLVHVIIYMGFPSW 84
>gi|295311662|ref|YP_003587231.1| ribosomal protein S3 [Citrullus lanatus]
gi|259156790|gb|ACV96652.1| ribosomal protein S3 [Citrullus lanatus]
Length = 563
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 50/178 (28%), Positives = 88/178 (49%), Gaps = 5/178 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN T +
Sbjct: 379 KVIELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTKT 437
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+LIAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 438 NTLIESVKIKSVYQSASLIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 497
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
SGRL GAE++RTEC G+ IDY A T YG G+KV++S + + +
Sbjct: 498 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISYKKKKKER 555
Score = 52.7 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 9/101 (8%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54
M +K NPI RL +N + +S WF+ YG LL++D+ +R Y + +
Sbjct: 1 MARKGNPISVRLDLNRSSDSSWFSDYY-YGKLLYQDVNLRSYFGSIRPPTRLTFGFRLGR 59
Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95
+I K R ++ P K + K K+
Sbjct: 60 CIILHFPK--RTFIHFFLPRRPRRLKRREKSKPGKEKGRWW 98
>gi|223927992|gb|ACN23647.1| ribosomal protein S3 [Halimeda gigas]
gi|223927995|gb|ACN23649.1| ribosomal protein S3 [Halimeda gigas]
Length = 149
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 9/140 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S W+A Y + ED +R L +A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSHWYASKKYYSKYVLEDHFVRTLLSEKYNRARFEKIQISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111
+ I++Y+ +P ++IGKKG ++E +K++ NS++ + +
Sbjct: 61 IEDHLEIVIYAQKPDILIGKKGENLEIFQKQIKTFIFQYRQIEWNSKLKVILYIFQCKMS 120
Query: 112 NATLIAQSIAQQLERRVVFR 131
++ IA I + LE+R+ ++
Sbjct: 121 ASSAIADFIVEHLEKRIPYK 140
>gi|302748597|gb|ADL63779.1| ribosomal protein S3 [Bursera sp. Qiu 94206]
Length = 507
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 50/178 (28%), Positives = 84/178 (47%), Gaps = 5/178 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E + + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 325 KVMELIDKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 383
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M G +G+++
Sbjct: 384 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMNKGVEGIRICC 443
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
SGRL GAE++RTEC G+ IDY A T YG G+KV++S +
Sbjct: 444 SGRLEGAEIARTECGKYGKTSCNVFNQKIDYAPAEVSTRYGISGVKVWISYSKKKGGR 501
>gi|56180994|gb|AAV83608.1| ribosomal protein S3 [Halimeda discoidea]
Length = 165
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 46/166 (27%), Positives = 85/166 (51%), Gaps = 12/166 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L K+A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKRYYSKYVLEDHFVRTILSEKYKRAKFEKIHISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN-------MTNSEIHLSVNEVPKPEIN 112
+ I++++ +P ++IGKK ++ +K++ + + + + + +I+
Sbjct: 61 IEDHLEIVIHAQKPDILIGKKSETLKSFQKQIKKYIFQYRQIEWNSKLKVIIYIFRCKIH 120
Query: 113 ATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155
A+ IA I + LE+RV ++ K+ +Q + A G+K+ SG
Sbjct: 121 ASSIADFIVEHLEKRVPYKVVFVLLKKHLQR-QKHSALGMKIQISG 165
>gi|302749021|gb|ADL63990.1| ribosomal protein S3 [Schinus molle]
Length = 507
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 50/178 (28%), Positives = 85/178 (47%), Gaps = 5/178 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 325 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 383
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M G +G+++
Sbjct: 384 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMNKGVEGIRICC 443
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
SGRL GAE++RTEC G+ IDY A T YG G+KV++S +
Sbjct: 444 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISYSQKKGGR 501
>gi|302748951|gb|ADL63955.1| ribosomal protein S3 [Phyllanthus angustifolius]
Length = 505
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 50/178 (28%), Positives = 87/178 (48%), Gaps = 5/178 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 323 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 381
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153
+ ++ +A+LIAQ I+ QL + FR + + + M+ G +G+++
Sbjct: 382 NTLIESVKMKSVYQSASLIAQDISFQLRNKTRSFRSIYSKIVKDIPLVMKKGVEGIRICC 441
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
SGRL GAE++RTEC G+ IDY A T YG G+KV++S +
Sbjct: 442 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISYSKKKGGR 499
>gi|302748893|gb|ADL63926.1| ribosomal protein S3 [Myrtus communis]
Length = 502
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 48/178 (26%), Positives = 86/178 (48%), Gaps = 5/178 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN T +
Sbjct: 320 KVMELIEKFIYLGGIVEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTKT 378
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRA---MKRAVQSAMRFGADGVKVIA 153
++ ++ +A+ IAQ I+ QL +R FR + + + M+ G +G+++
Sbjct: 379 NTNIESVKIKSVYQSASPIAQEISFQLRNKRRSFRSIYSNIVKDIPLVMKKGVEGIRICC 438
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
SGR GAE++RTEC G+ IDY A T YG G+KV++S +
Sbjct: 439 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWISFSKKKGGR 496
>gi|288191194|gb|ADC43950.1| ribosomal protein S3 [Ochthocosmus longipedicellatus]
Length = 475
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + + ++ I + ++ G +++K+R LSN T
Sbjct: 300 KVMELIEKFINLGKIGEL---IKGIEMMIEIILRNRRIMYGYNSYLNEMKKMRSLLSNRT 356
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKV 151
N+ + ++ +A+ IAQ I+ QL + FR + +Q M+ G +G+++
Sbjct: 357 NTNTLIESVKIQSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIQLVMKKGVEGIRI 416
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 417 CCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 469
>gi|288191164|gb|ADC43935.1| ribosomal protein S3 [Suregada glomerulata]
Length = 505
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 50/171 (29%), Positives = 86/171 (50%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 330 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 388
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL ++ FR + V+ M+ G +G+++
Sbjct: 389 NTLIESVKIKSVYQSASPIAQDISFQLRKKTREFRSIFSKIVKDIPLVMKKGVEGIRICC 448
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 449 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 499
>gi|288191122|gb|ADC43914.1| ribosomal protein S3 [Centroplacus glaucinus]
Length = 501
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 49/177 (27%), Positives = 86/177 (48%), Gaps = 5/177 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ ++R +++K+R LSN TN+
Sbjct: 326 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNSRIPYGYNSYLNEMKKMRSLLSNRTNT 384
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL ++ FR + V+ M+ G +G+++
Sbjct: 385 NTLIESVKIKSVYQSASPIAQDISFQLRKKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 444
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 445 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISYSKIKGG 501
>gi|188038608|gb|ACD46917.1| ribosomal protein S3 [Ginkgo biloba]
Length = 578
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 48/145 (33%), Positives = 73/145 (50%), Gaps = 6/145 (4%)
Query: 66 IIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQ 123
I + + G ++ ++R LSN TN+ + E+ +A+LIAQ I+ Q
Sbjct: 418 IGIILRNRRIPYGYNYYLNEVREMRSLLSNRTNTNTLIGSVEIESVYQSASLIAQDISFQ 477
Query: 124 LERRVV-FRRAMKRAVQ---SAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
L + FR + V+ S M G G+++ SGRL GAE++RTEC G+ R
Sbjct: 478 LRSKTRSFRSIFSQIVRDIPSVMPKGVRGIRICCSGRLKGAEIARTECRKYGKTSCNAFR 537
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSL 204
IDY +A T YG G+KV++S
Sbjct: 538 HKIDYASAKVSTRYGILGVKVWISY 562
Score = 58.1 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54
M +K+NPI RL +N + +S WF+ YG L+++D+ +R+Y + +
Sbjct: 1 MARKVNPISVRLNLNRSSDSSWFSDYY-YGKLVYQDVNLRDYFGSIRPPTRKTFGFRLGR 59
Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTD 83
+I K I ++ R + ++G
Sbjct: 60 CIIHHFPKRTFIHLFLPRRPRRLKRRGKS 88
>gi|223928045|gb|ACN23682.1| ribosomal protein S3 [Halimeda tuna]
gi|223928048|gb|ACN23684.1| ribosomal protein S3 [Halimeda tuna]
gi|223928051|gb|ACN23686.1| ribosomal protein S3 [Halimeda tuna]
gi|223928054|gb|ACN23688.1| ribosomal protein S3 [Halimeda tuna]
gi|223928057|gb|ACN23690.1| ribosomal protein S3 [Halimeda tuna]
gi|223928060|gb|ACN23692.1| ribosomal protein S3 [Halimeda tuna]
Length = 165
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L K+A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKRHYSKYVLEDNFVRTILSEKYKRAKFEKIQISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN--MTNSEIHLSVN-----EVPKPEIN 112
+ I++++ +P ++IGKK ++E +K++ +I + + + +
Sbjct: 61 IEDHLEIVIHAQQPDILIGKKSENLEVFQKQIKKFIFQYRQIEWNSKLKVILYIFRCKNT 120
Query: 113 ATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155
A+ IA I + LE+RV ++ K+ +Q + A G+KV +G
Sbjct: 121 ASSIADFIVEHLEKRVPYKVIFVLLKKHLQR-QKHSALGMKVQIAG 165
>gi|302748683|gb|ADL63822.1| ribosomal protein S3 [Cupaniopsis anacardioides]
Length = 499
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 9/172 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E + + G+ ++ I + + + G +++K+R LSN T
Sbjct: 329 KVMELIDKFINLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEVKKMRSLLSNRT 385
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSA---MRFGADGVKVI 152
N+ + ++ +A+ IAQ I+ QL R FR + V++ M G +G+++
Sbjct: 386 NTNTLIESVKIKSVYQSASPIAQDISFQL-RNKTFRSIFSKIVKNIPLVMNKGVEGIRIC 444
Query: 153 ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 445 CSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 496
>gi|288191239|gb|ADC43972.1| ribosomal protein S3 [Paradrypetes subintegrifolia]
Length = 498
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 86/171 (50%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + + +++K+R LSN TN+
Sbjct: 326 KVMELIEKFINLGRIGEL-IKGIEMMIEIILRNRKIPYGYNSYLNEMKKMRSLLSNRTNT 384
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ + ++ +A+ IAQ I+ QL ++ FR + V+ M+ G +G+++
Sbjct: 385 KTLIESVKIQSVYQSASPIAQDISFQLRNKKRAFRSIFSKIVKDIPLVMKKGVEGIRICC 444
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ L IDY A T YG G+KV++S
Sbjct: 445 SGRSEGAEIARTECGKYGKTSLNVFNQKIDYAPAEVSTRYGISGVKVWISY 495
>gi|288191176|gb|ADC43941.1| ribosomal protein S3 [Vantanea guianensis]
Length = 515
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 340 KVMEFIDPFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 398
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 399 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 458
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 459 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 509
>gi|302748862|gb|ADL63911.1| ribosomal protein S3 [Manilkara zapota]
Length = 484
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 51/178 (28%), Positives = 86/178 (48%), Gaps = 6/178 (3%)
Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90
LL +D K+ E ++ + G+ ++ I+ II+ + R +++K+R
Sbjct: 304 NLLGKD-KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSL 361
Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGA 146
LSN TN+ + ++ +A+ IAQ I+ Q + FR + V+ M G
Sbjct: 362 LSNRTNTNTLMESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMNKGV 421
Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
+G+++ SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 422 EGIRICCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 479
>gi|302748687|gb|ADL63824.1| ribosomal protein S3 [Cyrilla racemiflora]
Length = 490
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 310 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 368
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKDIPLVMKKGVEGIRICC 428
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 429 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 479
>gi|288191188|gb|ADC43947.1| ribosomal protein S3 [Irvingia malayana]
Length = 507
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 50/173 (28%), Positives = 82/173 (47%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E + + G+ ++ I + G+ G +I+K+R LSN T
Sbjct: 332 KVMELIDKFINLGGIGEL---IKGIEMMIEIILRNRGIPYGYNSYLNEIKKMRSLLSNRT 388
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 389 NTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRI 448
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 449 CCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 501
>gi|328775209|gb|AEB40000.1| ribosomal protein S3 [Funaria hygrometrica]
Length = 535
Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 46/139 (33%), Positives = 68/139 (48%), Gaps = 7/139 (5%)
Query: 67 IVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLER 126
V+S KK LSN T + + ++ +A+LIAQ I+ +LE+
Sbjct: 402 KVHSLFSRYYYWKKMQFF------LSNQTKTNTLIRPVKIASVYQSASLIAQEISWKLEQ 455
Query: 127 RVVFRRAMKRAVQSAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYG 185
+ FR+ + Q + G+++ SGRLNGAE+++TEC G L IDY
Sbjct: 456 KKSFRQICRSTFQQIEKCQYVKGIRICCSGRLNGAEIAKTECRKYGETSLHVFSDQIDYA 515
Query: 186 TAVAETAYGSCGIKVYVSL 204
A A T YG G+KV+VS
Sbjct: 516 KAQASTPYGILGVKVWVSY 534
Score = 68.9 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 8/133 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG------VAK 54
M QKINPI RL +N + +S WF+ YG LL++D+ R+Y G + K
Sbjct: 1 MAQKINPISVRLNLNRSSDSSWFSDYY-YGKLLYQDVNFRDYFDLIRPPTGKTFGFRLGK 59
Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINA 113
+I K I V+ G + K + + + +EI + + + +
Sbjct: 60 FIIHHFPKRTFIHVFFLDRLSRSRHTGLGAIQSVKLIRRIDDATEIQRNEVKSRRYGYDD 119
Query: 114 TLIAQSIAQQLER 126
L + QL R
Sbjct: 120 RLPSMHEIDQLLR 132
>gi|288191200|gb|ADC43953.1| ribosomal protein S3 [Durandea pentagyna]
Length = 493
Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 49/173 (28%), Positives = 83/173 (47%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ G+ ++ + I + + G +++K+R LSN T
Sbjct: 318 KVMELIEKFRNLGGIGEL---KKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRT 374
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+LIAQ I+ QL +R FR + V+ M+ G +G+++
Sbjct: 375 NTNTLIESVKIQSVYQSASLIAQDISFQLRNKRRSFRSIFSKIVKDIPLVMKKGVEGIRI 434
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 435 CCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 487
>gi|56180997|gb|AAV83610.1| ribosomal protein S3 [Halimeda discoidea]
Length = 165
Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 47/166 (28%), Positives = 86/166 (51%), Gaps = 12/166 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L K+A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKRYYXKYVLEDHFVRTILSEKYKRAKFEKIHISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--TNSEIHLS-----VNEVPKPEIN 112
+ I++++ +P ++IGKK ++ +K++ +I + + + + +I+
Sbjct: 61 IEDHLEIVIHAQKPDILIGKKSETLKSFQKQIKKYIFQYRQIEWNSKLXVIVYIFRCKIH 120
Query: 113 ATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155
A+ IA I + LE+RV ++ K+ +Q + A G+K+ SG
Sbjct: 121 ASSIADFIVEHLEKRVPYKVVFVLLKKHLQR-QKHSALGMKIQISG 165
>gi|288191162|gb|ADC43934.1| ribosomal protein S3 [Spathiostemon javensis]
Length = 505
Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 51/171 (29%), Positives = 85/171 (49%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +I+K+R LSN TN+
Sbjct: 330 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEIKKMRSLLSNRTNT 388
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 389 NTLIESIKMKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 448
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 449 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 499
>gi|58012161|gb|AAW62569.1| ribosomal protein S3 [Phytophthora infestans]
Length = 275
Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 58/249 (23%), Positives = 93/249 (37%), Gaps = 44/249 (17%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--HLKQAGVAKILIE 58
MGQKI PI RL WNS+W +EY LLH DL+I++Y + + K + I I
Sbjct: 1 MGQKIIPISLRLNKKKNWNSKWIVNDNEYSNLLHFDLEIKKYFENIFNYKNLKLIDINII 60
Query: 59 RTHKNCRIIVYSARPGLIIGK-----------------------KGTDIEKIRKKLSNM- 94
+T N + +Y + K K + K N+
Sbjct: 61 KTSNNINVYIYIQKNAKKYYKLSYNKLINNLNIYYPNNNIKLFIKNIQFFEFIKLRKNLK 120
Query: 95 -------------TNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSA 141
N + + N +I I Q LER+ ++ +
Sbjct: 121 KIFDKIKKKNRINKNVKKMIYNFSYAFYTKNINIITFYIKQTLERKKTHKKFINNIDNML 180
Query: 142 MRFGAD-----GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196
F G ++ GRLN ++ + + +G++PL TL I Y +T G C
Sbjct: 181 QEFFQMFSNFIGYRLQFKGRLNKSKRKKKMNFQKGKIPLNTLDYDIKYHFNEFKTPSGIC 240
Query: 197 GIKVYVSLR 205
IK+++ +
Sbjct: 241 SIKLWIFFK 249
>gi|288191144|gb|ADC43925.1| ribosomal protein S3 [Dalechampia spathulata]
Length = 503
Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 51/171 (29%), Positives = 86/171 (50%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E+L+ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 328 KVMEFLEKLINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 386
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 387 NTLIESIKMKSVYQSASPIAQDISFQLRNKTRSFRSIFTKIVKDIPLVMKKGVEGIRICC 446
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 447 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 497
>gi|130076598|gb|ABO31957.1| ribosomal protein S3 [Tetracarpaea tasmanica]
Length = 499
Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 326 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 384
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q +R FR + V+ M+ G +G+++
Sbjct: 385 NTLIESVKIKSVYQSASPIAQDISFQPRNKRRSFRSIFSKIVKDIPLVMKKGVEGIRICC 444
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 445 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 495
>gi|130076594|gb|ABO31955.1| ribosomal protein S3 [Saxifraga sarmentosa]
Length = 507
Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 326 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 384
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q +R FR + V+ M+ G +G+++
Sbjct: 385 NTLIESVKIKSVYQSASPIAQDISFQPRNKRRSFRSIFSQIVKDIPLVMKKGVEGIRICC 444
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 445 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 495
>gi|56181048|gb|AAV83644.1| ribosomal protein S3 [Halimeda tuna]
Length = 165
Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L K+A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKHYSKYVLEDNFVRTILLEKYKRAKFEKIQISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN--MTNSEIHLSVN-----EVPKPEIN 112
+ I++++ +P ++IGKK ++E +K++ +I + + + +
Sbjct: 61 IEDHLEIVIHAQKPDILIGKKSENLEVFQKQIKKFIFQYRQIEWNSKLKVILYIFRCKNT 120
Query: 113 ATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155
A+ IA I + LE+RV ++ K+ +Q + A G+KV +G
Sbjct: 121 ASSIADFIVENLEKRVPYKVVFVLLKKHLQR-QKHSALGMKVQIAG 165
>gi|302748824|gb|ADL63892.1| ribosomal protein S3 [Ixerba brexioides]
Length = 506
Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 9/180 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ + I + + G +++K+R LSN T
Sbjct: 325 KVMELIEKFIDLGGIGEF---LKGIEMMIEIILRNRIIPYGYNSYLNEVKKMRSLLSNRT 381
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 382 NTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRI 441
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
SGR GAE++RTEC G+ IDY A T YG G+KV++S +
Sbjct: 442 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISYSKKKGGR 501
>gi|302748782|gb|ADL63871.1| ribosomal protein S3 [Helwingia japonica]
Length = 487
Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 48/179 (26%), Positives = 83/179 (46%), Gaps = 9/179 (5%)
Query: 32 LLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRK 89
L E K+ E ++ + G+ ++ I + + + G +++K+R
Sbjct: 308 NLMEKDKVMELIEKFIDLGGIGEL---IKGIEMMIEIILRKRIIPYGYNSYLNEVKKMRS 364
Query: 90 KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFG 145
LSN TN+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G
Sbjct: 365 LLSNRTNTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKG 424
Query: 146 ADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
+G+++ SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 425 VEGIRICCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 483
>gi|325087729|gb|EGC41039.1| 40S ribosomal protein S3 [Ajellomyces capsulatus H88]
Length = 1089
Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 43/202 (21%), Positives = 81/202 (40%), Gaps = 13/202 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ Q L + G + + + T II+ + ++G++G
Sbjct: 834 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 886
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V ++A +S+ +L + RRA ++
Sbjct: 887 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 946
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q +R ID T G GI
Sbjct: 947 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQGVLGI 1005
Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220
KV + + +
Sbjct: 1006 KVKIMRGSDPEGKSGPQKSLPD 1027
>gi|288191261|gb|ADC43983.1| ribosomal protein S3 [Brunellia acutangula]
Length = 506
Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 331 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 389
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 390 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 449
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 450 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 500
>gi|240281578|gb|EER45081.1| 40S ribosomal protein S3 [Ajellomyces capsulatus H143]
Length = 1054
Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 43/202 (21%), Positives = 81/202 (40%), Gaps = 13/202 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ Q L + G + + + T II+ + ++G++G
Sbjct: 799 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 851
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V ++A +S+ +L + RRA ++
Sbjct: 852 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 911
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q +R ID T G GI
Sbjct: 912 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQGVLGI 970
Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220
KV + + +
Sbjct: 971 KVKIMRGSDPEGKSGPQKSLPD 992
>gi|288191267|gb|ADC43986.1| ribosomal protein S3 [Crinodendron hookerianum]
Length = 505
Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 330 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNA 388
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 389 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 448
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 449 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 499
>gi|227827697|ref|YP_002829477.1| 30S ribosomal protein S3P [Sulfolobus islandicus M.14.25]
gi|227830393|ref|YP_002832173.1| 30S ribosomal protein S3P [Sulfolobus islandicus L.S.2.15]
gi|229579212|ref|YP_002837610.1| 30S ribosomal protein S3P [Sulfolobus islandicus Y.G.57.14]
gi|229582036|ref|YP_002840435.1| 30S ribosomal protein S3P [Sulfolobus islandicus Y.N.15.51]
gi|229584901|ref|YP_002843403.1| 30S ribosomal protein S3P [Sulfolobus islandicus M.16.27]
gi|238619868|ref|YP_002914694.1| 30S ribosomal protein S3P [Sulfolobus islandicus M.16.4]
gi|284997900|ref|YP_003419667.1| ribosomal protein S3 [Sulfolobus islandicus L.D.8.5]
gi|227456841|gb|ACP35528.1| ribosomal protein S3 [Sulfolobus islandicus L.S.2.15]
gi|227459493|gb|ACP38179.1| ribosomal protein S3 [Sulfolobus islandicus M.14.25]
gi|228009926|gb|ACP45688.1| ribosomal protein S3 [Sulfolobus islandicus Y.G.57.14]
gi|228012752|gb|ACP48513.1| ribosomal protein S3 [Sulfolobus islandicus Y.N.15.51]
gi|228019951|gb|ACP55358.1| ribosomal protein S3 [Sulfolobus islandicus M.16.27]
gi|238380938|gb|ACR42026.1| ribosomal protein S3 [Sulfolobus islandicus M.16.4]
gi|284445795|gb|ADB87297.1| ribosomal protein S3 [Sulfolobus islandicus L.D.8.5]
gi|323474755|gb|ADX85361.1| ribosomal protein S3 [Sulfolobus islandicus REY15A]
gi|323477483|gb|ADX82721.1| ribosomal protein S3 [Sulfolobus islandicus HVE10/4]
Length = 216
Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 56/185 (30%), Positives = 94/185 (50%), Gaps = 4/185 (2%)
Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN 96
+KI EYL A A + + +T R+I+Y+ RP +IIG+ G +I+++ + +
Sbjct: 3 VKIDEYLAKQYYNAEYAGVEVLKTPIGTRVIIYAGRPSMIIGRGGRNIKQLAQIFEKVFG 62
Query: 97 -SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155
+++ V PE+NA ++A +A LE+ FRRA +++ M GA G ++I SG
Sbjct: 63 LENPQITITNVENPELNARVMAFRLAIALEKGYHFRRAAFISMRRIMNAGALGAEIIISG 122
Query: 156 RLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
+L E +R E EG V Q L ID A+A G G++V ++ ++ D S
Sbjct: 123 KLT-TERARYEKLKEGIVYKSGQQLEKMIDRAIAIAMLKPGIFGVEVVITKPLKIEDKIS 181
Query: 214 TIPAA 218
+
Sbjct: 182 LKESP 186
>gi|91208873|ref|YP_539034.1| ribosomal protein S3 [Physcomitrella patens]
gi|90991413|dbj|BAE93105.1| ribosomal protein S3 [Physcomitrella patens]
Length = 535
Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 46/139 (33%), Positives = 68/139 (48%), Gaps = 7/139 (5%)
Query: 67 IVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLER 126
V+S KK LSN T + + ++ +A+LIAQ I+ +LE+
Sbjct: 402 KVHSLFSRYYYWKKMQFF------LSNQTKTNTLIRPVKIASVYQSASLIAQEISWKLEQ 455
Query: 127 RVVFRRAMKRAVQSAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYG 185
+ FR+ + Q + G+++ SGRLNGAE+++TEC G L IDY
Sbjct: 456 KKSFRQICRSTFQQIEKCQYVKGIRICCSGRLNGAEIAKTECRKYGETSLHVFSDQIDYA 515
Query: 186 TAVAETAYGSCGIKVYVSL 204
A A T YG G+KV+VS
Sbjct: 516 KAQASTPYGILGVKVWVSY 534
Score = 68.9 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 8/133 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG------VAK 54
M QKINPI RL +N + +S WF+ YG LL++D+ R+Y G + K
Sbjct: 1 MAQKINPISVRLNLNRSSDSSWFSDYY-YGKLLYQDVNFRDYFDLIRPPTGKTFGFRLGK 59
Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEIHLSVNEVPKPEINA 113
+I K I V+ G + K + + + +EI + + + +
Sbjct: 60 FIIHHFPKRTFIHVFFLDRLSRSRHTGLGAIQSVKLIRRIDDATEIQRNEVKSRRYGYDD 119
Query: 114 TLIAQSIAQQLER 126
L + QL R
Sbjct: 120 RLPSMHEIDQLLR 132
>gi|302748788|gb|ADL63874.1| ribosomal protein S3 [Houttuynia cordata]
Length = 483
Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ G+A++ ++ II+ + +++KIR LSN TN+
Sbjct: 310 KVMELIEKLRDLGGIAEL-LKGIEMMMEIILKNRSIPYGYNSYLNEVQKIRSLLSNRTNT 368
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+LIAQ I+ Q + FR + V+ M G +G+++
Sbjct: 369 NTLIESVKIKSVYQSASLIAQDISFQPRNKTRSFRSIFSQIVKDIPLVMPKGVEGIRICC 428
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY +A T YG G+KV++S
Sbjct: 429 SGRLEGAEIARTECVKYGKTSCNVFHQKIDYASAEVSTRYGISGVKVWISY 479
>gi|543684|pir||S40459 ribosomal protein S3 - Chlamydomonas humicola chloroplast
(fragment)
Length = 682
Score = 105 bits (263), Expect = 4e-21, Method: Composition-based stats.
Identities = 49/126 (38%), Positives = 70/126 (55%), Gaps = 4/126 (3%)
Query: 77 IGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKR 136
I K+ T ++ ++ V A+++A S+ LE+R FR+ +K
Sbjct: 560 IEKQRTIYTDNISLTPKISIKFYSVNAKSVK---AKASVVADSVVDALEKRKGFRKVIKD 616
Query: 137 AVQSAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGS 195
A + MR G GVK+ SGRLNGAE++R+E GRVPLQTLRA++DY A T YG
Sbjct: 617 AKEELMRTSGVKGVKIQVSGRLNGAEIARSEWVRAGRVPLQTLRANLDYSYKTASTIYGI 676
Query: 196 CGIKVY 201
G+KV+
Sbjct: 677 IGVKVW 682
Score = 71.6 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFA--RGSEYGALLHEDLKIREYLQCHLKQ 49
MGQK++P+ FR+G+ S+WFA ++Y + ED +RE L Q
Sbjct: 1 MGQKVHPLGFRVGITKKHQSQWFARFNKNKYAQSVLEDRMLRETLTNLFPQ 51
>gi|272716756|gb|ACZ95680.1| ribosomal protein S3 [Gnetum montanum]
Length = 684
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 11/150 (7%)
Query: 66 IIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQ 123
I + + G ++ K+R LS+ TN+ ++ +A+LIAQ I+ Q
Sbjct: 520 ISIILRNRRIPYGYNYYLNEVRKVRSLLSDRTNTNTFFGSVKIESVYQSASLIAQDISFQ 579
Query: 124 LERRVV---FRRAMKRAVQSAMRF------GADGVKVIASGRLNGAELSRTECYLEGRVP 174
L R FR + V+ G G+++ SGRL GAE++RTEC G+
Sbjct: 580 LRGRNRTRSFRSIFSQIVRDIPNPKVMPPKGVRGIRICCSGRLKGAEIARTECREYGKTS 639
Query: 175 LQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
+ IDY +A T YG G+KV++S
Sbjct: 640 INVFCQKIDYASAKVSTRYGILGVKVWISY 669
>gi|302748975|gb|ADL63967.1| ribosomal protein S3 [Polyosma sp. Johns 9558]
Length = 490
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 5/178 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + + +++K+R LSN TN+
Sbjct: 311 KVMELIEKFIDLGRIGEL-IKGIEMMIEIILRNRKIPYGYNSYLNEVKKMRSLLSNRTNT 369
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++
Sbjct: 370 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 429
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
SGR GAE++RTEC G++ IDY A T YG G+KV++S +
Sbjct: 430 SGRSKGAEIARTECGKYGKISRNVFNQKIDYAPAEVSTRYGILGVKVWISYSKKKGGR 487
>gi|50261292|ref|YP_052900.1| ribosomal protein S3 [Saprolegnia ferax]
gi|48237605|gb|AAT40654.1| ribosomal protein S3 [Saprolegnia ferax]
Length = 296
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 54/253 (21%), Positives = 103/253 (40%), Gaps = 47/253 (18%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQKI PI RL W+S+W Y +LH DL++R+Y++ L ++ + I+
Sbjct: 1 MGQKIIPISLRLKNRKNWHSQWIVEKKNYAEILHFDLELRKYIETLLNNKKISTLQIKIN 60
Query: 61 HKNCRIIVYSARPGLI----IGKKGTDIEKIRKKLSNMTNSEIHL--------------- 101
+ + +Y + K+ + + L+N N ++
Sbjct: 61 KVSKNLYIYVFVHNTFKKEILKKQSNILFHLNSYLNNKYNIKLFFLKAHFKLNNYQKNLR 120
Query: 102 -----------------------SVNEVPKPEINATLIAQSIAQQLERRVVFR---RAMK 135
S+ ++ +I++ I + ++++ + R +
Sbjct: 121 FYIYKYLKKKRRRLKDKKILKFLSICQIAFTLGKMNIISKYIVRTIKKKKIHRGYLNFIN 180
Query: 136 RAVQSAMRFGAD--GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAY 193
R ++ + + G K+ GR+NGA+ R Y EGR+PL +L +I Y T
Sbjct: 181 RILKEYFKMNSKILGYKLQVKGRVNGAKRKRKLVYQEGRIPLSSLDKNIQYTFDEFITKS 240
Query: 194 GSCGIKVYVSLRD 206
G C +K++ L+D
Sbjct: 241 GVCSVKMWFYLKD 253
>gi|302748796|gb|ADL63878.1| ribosomal protein S3 [Hydrangea arborescens]
Length = 483
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 310 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 368
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++
Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 428
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 429 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWISY 479
>gi|288191118|gb|ADC43912.1| ribosomal protein S3 [Anthodiscus amazonicus]
Length = 505
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + + +++K+R LSN T +
Sbjct: 330 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRKIPYGYNSYLNEMKKMRSLLSNRTKT 388
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL +R FR + V+ M+ G +G+++
Sbjct: 389 NTLIESVKIQSVYQSASPIAQDISFQLRNKRRSFRSIFSQIVKDIPLVMKKGVEGIRICC 448
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC + IDY A T YG G+KV++S
Sbjct: 449 SGRSKGAEIARTECGKYRKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 499
>gi|302748985|gb|ADL63972.1| ribosomal protein S3 [Quintinia verdonii]
Length = 506
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 5/178 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + + +++K+R LSN TN+
Sbjct: 325 KVMELIEKFIDLGRIGEL-IKGIEMMIEIILRNRKIPYGYNSYLNEVKKMRSLLSNRTNT 383
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++
Sbjct: 384 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 443
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
SGR GAE++RTEC G++ IDY A T YG G+KV++S +
Sbjct: 444 SGRSKGAEIARTECGKYGKISRNVFNQKIDYAPAEVSTRYGILGVKVWISYSKKKGGR 501
>gi|302748643|gb|ADL63802.1| ribosomal protein S3 [Choristylis rhamnoides]
Length = 493
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 9/172 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ + ++ + G+ ++ I + + G +++KIR LSN T
Sbjct: 325 KVMKLIEKFINLGGIGEL---IKGIEMMIEIIVRNRIIPYGYNSYLNEVKKIRSLLSNRT 381
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ Q + + FR + V+ M+ G +G+++
Sbjct: 382 NTNTLIESVKIKSVYQSASPIAQDISFQPKNKTRSFRSIFSKIVKDIPLVMKKGVEGIRI 441
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 442 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWIS 493
>gi|302749065|gb|ADL64012.1| ribosomal protein S3 [Styrax japonicus]
Length = 483
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 51/178 (28%), Positives = 87/178 (48%), Gaps = 6/178 (3%)
Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90
LL +D K+ E ++ + G+ ++ I+ II+ + R +++K+R
Sbjct: 304 NLLGKD-KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSL 361
Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGA 146
LSN TN+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G
Sbjct: 362 LSNRTNTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGV 421
Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
+G+++ SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 422 EGIRICCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 479
>gi|302748751|gb|ADL63856.1| ribosomal protein S3 [Garrya elliptica]
Length = 483
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 310 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 368
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++
Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 428
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 429 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWISY 479
>gi|302748989|gb|ADL63974.1| ribosomal protein S3 [Reinwardtia trigyna]
Length = 505
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 50/178 (28%), Positives = 88/178 (49%), Gaps = 5/178 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 323 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 381
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153
+ + ++ +A+LIAQ I+ QL + FR + + + M+ G +G+++
Sbjct: 382 KTLIESVKMKSVYQSASLIAQDISFQLRNKTRSFRSIYSKIVKDIPLVMKKGVEGIRICC 441
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
SGRL GAE++RTEC G+ IDY A T YG G+KV++S +
Sbjct: 442 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISYSKKKGGR 499
>gi|223928039|gb|ACN23678.1| ribosomal protein S3 [Halimeda scabra]
Length = 165
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L K+A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKHYSKYVLEDNFVRTILLEKYKRAKFEKIQISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN--MTNSEIHLSVN-----EVPKPEIN 112
+ I++++ +P ++IGKK ++E +K++ +I + + + +
Sbjct: 61 IEDHLEIVIHAQKPDILIGKKSENLEVFQKQIKKFIFQYRQIEWNSKLKVILYIFRCKNT 120
Query: 113 ATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155
A+ IA I + LE+RV ++ K+ +Q + G+KV +G
Sbjct: 121 ASSIADFIVENLEKRVPYKVVFVLLKKHLQR-QKHSXLGMKVQIAG 165
>gi|288191150|gb|ADC43928.1| ribosomal protein S3 [Lasiocroton bahamensis]
Length = 507
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 332 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 390
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 391 NTLIESIKMKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 450
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 451 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 501
>gi|296825392|ref|XP_002850808.1| 40S ribosomal protein S3 [Arthroderma otae CBS 113480]
gi|238838362|gb|EEQ28024.1| 40S ribosomal protein S3 [Arthroderma otae CBS 113480]
Length = 266
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 43/202 (21%), Positives = 81/202 (40%), Gaps = 13/202 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ Q L + G + + + T II+ + ++G++G
Sbjct: 17 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 69
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V ++A +S+ +L + RRA ++
Sbjct: 70 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 129
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q R ID+ T G GI
Sbjct: 130 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPARDFIDHATRHVLLRQGVLGI 188
Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220
KV + + +
Sbjct: 189 KVKIMRGSDPEGKSGPQKSLPD 210
>gi|315055209|ref|XP_003176979.1| 30S ribosomal protein S14p/S29e [Arthroderma gypseum CBS 118893]
gi|311338825|gb|EFQ98027.1| 30S ribosomal protein S14p/S29e [Arthroderma gypseum CBS 118893]
Length = 266
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 43/202 (21%), Positives = 81/202 (40%), Gaps = 13/202 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ Q L + G + + + T II+ + ++G++G
Sbjct: 17 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 69
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V ++A +S+ +L + RRA ++
Sbjct: 70 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 129
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q R ID+ T G GI
Sbjct: 130 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPARDFIDHATRHVLLRQGVLGI 188
Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220
KV + + +
Sbjct: 189 KVKIMRGSDPEGKSGPQKSLPD 210
>gi|288191209|gb|ADC43957.1| ribosomal protein S3 [Medusagyne oppositifolia]
Length = 473
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 46/173 (26%), Positives = 84/173 (48%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ I + + + G +++K+R LSN T
Sbjct: 301 KVMELIEKFINLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEMKKMRSLLSNRT 357
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRA---VQSAMRFGADGVKV 151
N+ ++ ++ +A+ IAQ I+ QL ++ FR + +Q ++ G +G+++
Sbjct: 358 NTNTNIESVKIKSVYQSASPIAQDISFQLRNKKRSFRSIFSKIVKDIQLGLKKGVEGIRI 417
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 418 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 470
>gi|288191146|gb|ADC43926.1| ribosomal protein S3 [Hevea sp. Gillespie 4272]
Length = 505
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 330 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 388
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 389 NTLIESVKIQSVFQSASSIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 448
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 449 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 499
>gi|18978191|ref|NP_579548.1| 30S ribosomal protein S3P [Pyrococcus furiosus DSM 3638]
gi|27734507|sp|Q8U004|RS3_PYRFU RecName: Full=30S ribosomal protein S3P
gi|18894000|gb|AAL81943.1| SSU ribosomal protein S3P [Pyrococcus furiosus DSM 3638]
Length = 210
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 57/194 (29%), Positives = 100/194 (51%), Gaps = 13/194 (6%)
Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-S 97
I E+L+ L++AG + I++T ++I+++A PG +IG+ G I ++ + L
Sbjct: 17 IDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIRELTRILEKQFGLE 76
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ V E+ P +NA + A +AQ LER + FRRA A+++ M GA GV++ SG+L
Sbjct: 77 NPQIEVEEIKNPYLNAKVQAVRLAQALERGIHFRRAAYAALRAIMNNGARGVEIRLSGKL 136
Query: 158 NGAELSRTECYLEGRV-----PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
G E +++ + +G + P +TL + G A A G G+KV + +
Sbjct: 137 TG-ERAKSIRFYQGYLAKVGNPAETLVSK---GYAQALLKLGVIGVKVAIMPPGARLPDE 192
Query: 213 STIPAAEHRVVEKD 226
I + VE++
Sbjct: 193 IEI---IEKPVEEE 203
>gi|320101360|ref|YP_004176952.1| 30S ribosomal protein S3P [Desulfurococcus mucosus DSM 2162]
gi|319753712|gb|ADV65470.1| SSU ribosomal protein S3P [Desulfurococcus mucosus DSM 2162]
Length = 222
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 51/192 (26%), Positives = 97/192 (50%), Gaps = 4/192 (2%)
Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN 96
L I E+L + K AG A + + RT R+++++ PG +IG+ G+ I+K+ L
Sbjct: 18 LMIDEFLAHYFKDAGYADVELYRTPTGYRVVIHAEYPGRLIGRGGSVIKKLSTILQTRFG 77
Query: 97 -SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155
++++++ V P++NA ++A I + LE+ + FRR + ++ M GA G ++I SG
Sbjct: 78 LDNVNVTISPVVDPDLNARVVAFRIVRALEKEIPFRRVIMYMLKRVMDAGAVGAEIIVSG 137
Query: 156 RLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
+L G E + E G+V + + +D A A G G++V + +
Sbjct: 138 KLRG-ERATYEKLKAGKVYKAGEPVEYVVDRAVAKALLKPGIFGVEVVIVKPNIKLPDHV 196
Query: 214 TIPAAEHRVVEK 225
+ A + +E+
Sbjct: 197 EVKALKPEEIEQ 208
>gi|223927986|gb|ACN23643.1| ribosomal protein S3 [Halimeda gigas]
Length = 156
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 9/140 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S W+A Y + ED +R L +A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSHWYASKKYYSKYVLEDHFVRTLLSEKYNRARFEKIQISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111
+ I++Y+ +P ++IGKKG ++E +K++ NS++ + +
Sbjct: 61 IEDHLEIVIYAQKPDILIGKKGENLEIFQKQIKTFIFQYRQIEWNSKLKVILYIFQCKTS 120
Query: 112 NATLIAQSIAQQLERRVVFR 131
++ IA I + LE+R+ ++
Sbjct: 121 ASSAIADFIVEHLEKRIPYK 140
>gi|632229|pir||S40460 ribosomal protein S3 - Chlamydomonas frankii chloroplast
(fragment)
Length = 809
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 50/132 (37%), Positives = 69/132 (52%), Gaps = 10/132 (7%)
Query: 77 IGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKR 136
I K+ ++ K + I + E A+++A SI LE+R FR+ +K
Sbjct: 681 IEKQKIVSKENLKLTPKIC---IKFYSVKQKNLEAKASIVADSIIDALEKRKAFRKVIKD 737
Query: 137 AVQSAMRFGA-------DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189
A ++ GVK+ SGRLNGAE++RTE GRVPLQTLRA+IDY A
Sbjct: 738 AKENLTSNSRVNGIKLVKGVKIQVSGRLNGAEIARTEWVRAGRVPLQTLRANIDYSYKTA 797
Query: 190 ETAYGSCGIKVY 201
T YG G+KV+
Sbjct: 798 NTIYGIIGVKVW 809
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/88 (28%), Positives = 37/88 (42%), Gaps = 10/88 (11%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR--GSEYGALLHEDLKIR--------EYLQCHLKQA 50
MGQK++P FR+G+ S+WFA+ Y + ED +R E L LK+
Sbjct: 1 MGQKVHPFGFRVGITKKHQSQWFAKFHKYNYSQSVLEDRILRNTLLKIFPELLNPVLKKV 60
Query: 51 GVAKILIERTHKNCRIIVYSARPGLIIG 78
+ T K +I + IG
Sbjct: 61 QKREDDTTITPKITQIKIERGFIPYEIG 88
>gi|288191285|gb|ADC43995.1| ribosomal protein S3 [Ruptiliocarpon caracolito]
Length = 509
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 84/171 (49%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 334 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSLLSNRTNT 392
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + + + M+ G +G+++
Sbjct: 393 NTLMESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSNIVKDIPLVMKKGVEGIRICC 452
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 453 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 503
>gi|288191160|gb|ADC43933.1| ribosomal protein S3 [Pogonophora schomburgkiana]
Length = 501
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 326 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 384
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 385 NTLIESVKIQSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 444
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 445 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 495
>gi|332158018|ref|YP_004423297.1| 30S ribosomal protein S3P [Pyrococcus sp. NA2]
gi|331033481|gb|AEC51293.1| 30S ribosomal protein S3P [Pyrococcus sp. NA2]
Length = 210
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 13/194 (6%)
Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-S 97
I E+L+ L++AG + I++T ++I+++A PG +IG+ G I ++ + L
Sbjct: 17 IDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIRELTRILEKQFGLE 76
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ V E+ P +NA + A IAQ LER + FRRA A+++ M GA GV++ SG+L
Sbjct: 77 NPQIDVQEIKNPYLNAKVQAVRIAQALERGIHFRRAAYAAMRAIMNNGARGVEIRLSGKL 136
Query: 158 NGAELSRTECYLEGRV-----PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
G E +++ + +G + P +TL + G A A G G+KV + D +
Sbjct: 137 TG-ERAKSIRFYQGYLAKVGNPAETLVSK---GYAQALLKLGVIGVKVAIMPPDARLPDE 192
Query: 213 STIPAAEHRVVEKD 226
I + VE++
Sbjct: 193 IEI---IEKPVEEE 203
>gi|77556488|gb|ABA99284.1| Mitochondrial ribosomal protein S3, putative [Oryza sativa Japonica
Group]
Length = 752
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + + K+ I + + + G +++K+R LSN T
Sbjct: 369 KVMELIEKFIYLGRIGKL---IKGIEMMIEIILRKRIIPYGYNSYLNEVQKMRSFLSNRT 425
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERR-VVFRRAMKRAVQ---SAMRFGADGVKV 151
N+ + ++ +A+LIAQ I+ QL + FR + V+ M G +G+++
Sbjct: 426 NTNTLIESVKIKSVYQSASLIAQDISFQLGNNPISFRSIFSQIVKDIPLIMPKGVEGIRI 485
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T G G+KV +S
Sbjct: 486 CCSGRLGGAEIARTECGKYGKTSCNVFNQKIDYALAEVSTRNGISGVKVRISY 538
>gi|288191190|gb|ADC43948.1| ribosomal protein S3 [Cyrillopsis paraensis]
Length = 475
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 46/173 (26%), Positives = 81/173 (46%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + + ++ I + ++ G +++K+R L N T
Sbjct: 300 KVMELIEKFINLGKIGEL---IKGIEMMIEIILRNRRIMYGYNSYLNEMKKMRSLLFNRT 356
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 357 NTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRI 416
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 417 CCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 469
>gi|302748723|gb|ADL63842.1| ribosomal protein S3 [Elaeocarpus obovatus]
Length = 507
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 325 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNA 383
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 384 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 443
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 444 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 494
>gi|288191301|gb|ADC44003.1| ribosomal protein S3 [Prunus caroliniana]
Length = 285
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 9/172 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + + +++ I + + G +++K+R LSN T
Sbjct: 117 KVMELIEKFIDLGRIGELIRGI---EMMIEIILRNRIIPYGYNSYLNEVKKMRSLLSNRT 173
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ QL + FR + V+ M+ G G+++
Sbjct: 174 NTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPFLMKKGVGGIRI 233
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RTEC + P IDY A T YG G+KV++S
Sbjct: 234 CCSGRSKGAEIARTECGKYRKTPRNVFNQKIDYAPAEVSTRYGILGVKVWIS 285
>gi|288191152|gb|ADC43929.1| ribosomal protein S3 [Manihot grahamii]
Length = 501
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 326 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 384
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 385 NTLIESVKIQSVFQSASSIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 444
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 445 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 495
>gi|288191237|gb|ADC43971.1| ribosomal protein S3 [Cassipourea lanceolata]
Length = 495
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 47/173 (27%), Positives = 84/173 (48%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + + ++ + I + + G +++K+R LSN T
Sbjct: 326 KVMELIEKLINLGRMGEL---KKGIEMMIEIILRNRKIPYGYNSYLNEMKKMRSLLSNRT 382
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151
N++ + ++ +A+ IAQ I+ QL ++ FR + V+ M+ G +G+++
Sbjct: 383 NTKTLIESVKIQSVYQSASPIAQDISFQLRNKKRSFRSIFSKIVKDIPLVMKKGVEGIRI 442
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ L IDY A T YG G+KV++S
Sbjct: 443 CCSGRSEGAEIARTECGKYGKTSLNVFNQKIDYAPAEVSTRYGISGVKVWISY 495
>gi|130076574|gb|ABO31945.1| ribosomal protein S3 [Heuchera micrantha]
Length = 485
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 312 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 370
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q +R FR + V+ M+ G +G+++
Sbjct: 371 NTLIESVKIKSVYQSASPIAQDISFQPRNKRRSFRSIFSQIVKDIPLVMKKGVEGIRICC 430
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 431 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 481
>gi|302748808|gb|ADL63884.1| ribosomal protein S3 [Icacina mannii]
Length = 480
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E + + G+ ++ I+ II+ + R +++K+R LSN T++
Sbjct: 307 KVMELIDKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTHT 365
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++
Sbjct: 366 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 425
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY +A T YG G+KV++S
Sbjct: 426 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYASAEVSTRYGILGVKVWISY 476
>gi|288191277|gb|ADC43991.1| ribosomal protein S3 [Plagiopteron suaveolens]
Length = 512
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ I + + + G +++K+R LSN T
Sbjct: 337 KVMELIEKFINLGGIGEL---IKGIEMMIEIILRKRKIPYGYNFYLNEVKKMRSLLSNRT 393
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 394 NTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRI 453
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 454 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 506
>gi|288191219|gb|ADC43962.1| ribosomal protein S3 [Heywoodia lucens]
Length = 495
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 326 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 384
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 385 NTLIESVKMKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 444
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 445 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 495
>gi|302748677|gb|ADL63819.1| ribosomal protein S3 [Crypteronia paniculata]
Length = 478
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 46/180 (25%), Positives = 83/180 (46%), Gaps = 9/180 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ I + + + G +++K+R LSN T
Sbjct: 296 KVMELIEKFIDLGGIVEL---IKGIEMMIEIILRKRQIPYGSNSYLNEVKKMRSLLSNRT 352
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151
+ ++ ++ +A+ IAQ I+ Q +R FR + V+ M+ G +G+++
Sbjct: 353 KTNTNIESVKIKSVYQSASTIAQDISFQPRNKRRSFRSIFTKIVKDIPLVMKKGVEGIRI 412
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
SGR GAE++RTEC G+ IDY A T YG G+KV++S +
Sbjct: 413 CCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWISYSQKKGGR 472
>gi|302748549|gb|ADL63755.1| ribosomal protein S3 [Aphanopetalum resinosum]
Length = 490
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 49/180 (27%), Positives = 86/180 (47%), Gaps = 9/180 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ I + + G +++K+R LSN T
Sbjct: 309 KVMELIEKFIDLGGIEEL---IKGIEMMIEIILRNRIIPYGYNSYLNEVKKMRSLLSNRT 365
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+LIAQ I+ Q +R+ FR + V+ M+ G +G+++
Sbjct: 366 NTNTLIESVKIKSVYQSASLIAQDISFQPRNKRISFRSIFSKIVKDIPLVMKKGVEGIRI 425
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
SGRL GAE++RTEC G+ IDY A T YG G+KV++S ++
Sbjct: 426 CCSGRLQGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISYSHKIKGR 485
>gi|288191293|gb|ADC43999.1| ribosomal protein S3 [Guaiacum sanctum]
Length = 500
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 45/172 (26%), Positives = 78/172 (45%), Gaps = 8/172 (4%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ R I + + G +++K+R LSN T
Sbjct: 326 KVMELIEKFIDLGGIGEL---RKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNKT 382
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGAD---GVKVI 152
+ + ++ +A+ IAQ I+ +L FR + V++ G+++
Sbjct: 383 KTNTLIESVKIKSVYQSASPIAQDISLKLRNTRSFRSIFSQIVKAIPLGMKKRVEGIRIC 442
Query: 153 ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 443 CSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWISY 494
>gi|272716741|gb|ACZ95672.1| ribosomal protein S3 [Nothotsuga longibracteata]
Length = 558
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 50/170 (29%), Positives = 79/170 (46%), Gaps = 7/170 (4%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSE 98
+ ++ K + I + I + + G ++ K+R LSN TN+
Sbjct: 389 KVIRLVEKFLSLGGIGVLMRGIGMMIEIILRNRRIPYGYNYYLNEVRKMRSLLSNRTNTN 448
Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIAS 154
+ ++ +A+LIAQ I+ QL R FR + V+ M G G+++ S
Sbjct: 449 TLIGSVKILN-YQSASLIAQDISFQLRDRTRSFRSIFSQIVRDIPLVMPKGVRGIRICCS 507
Query: 155 GRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
GRL GAE++RTEC G+ R IDY +A T YG G+KV++S
Sbjct: 508 GRLKGAEIARTECREYGKTSCNVFRHKIDYASAKVSTRYGILGVKVWISF 557
Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54
M +K+NPI RL +N + +S WF+ YG L+++D+ +R+Y + +
Sbjct: 1 MARKVNPISVRLHLNRSSDSSWFSDYY-YGKLVYQDVNLRDYFGSIRPPTRKTFGFRLGR 59
Query: 55 ILIERTHKNCRIIVY 69
+I K I ++
Sbjct: 60 CIIHHFPKRTFIHLF 74
>gi|288191273|gb|ADC43989.1| ribosomal protein S3 [Gymnosporia arbutifolia]
gi|288191275|gb|ADC43990.1| ribosomal protein S3 [Gymnosporia senegalensis]
Length = 501
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ + I + + + G +++K+R LSN T
Sbjct: 326 KVMELIEKFINLGGIGE---WIKGIEMMIEIILRKRKIPYGYNFYLNEVKKMRSLLSNRT 382
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
+ + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 383 KTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKDIPLVMKKGVEGIRI 442
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 443 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 495
>gi|288191142|gb|ADC43924.1| ribosomal protein S3 [Conceveiba martiana]
Length = 512
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 50/171 (29%), Positives = 86/171 (50%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 337 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 395
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL+ + FR + V+ M+ G +G+++
Sbjct: 396 NTLIESVKMKSVYQSASPIAQDISFQLKNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 455
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 456 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 506
>gi|56181340|gb|AAV83764.1| ribosomal protein S3 [Halimeda monile]
Length = 275
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
+ +++ + +P ++IGKKG +++ +K++ +
Sbjct: 61 IEDHLELVLRAQKPEVLIGKKGENLKNFQKEIKKLIFK 98
>gi|302508557|ref|XP_003016239.1| hypothetical protein ARB_05637 [Arthroderma benhamiae CBS 112371]
gi|302657285|ref|XP_003020367.1| hypothetical protein TRV_05538 [Trichophyton verrucosum HKI 0517]
gi|291179808|gb|EFE35594.1| hypothetical protein ARB_05637 [Arthroderma benhamiae CBS 112371]
gi|291184196|gb|EFE39749.1| hypothetical protein TRV_05538 [Trichophyton verrucosum HKI 0517]
Length = 266
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 43/202 (21%), Positives = 80/202 (39%), Gaps = 13/202 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ Q L + G + + + T II+ + ++G++G
Sbjct: 17 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 69
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V ++A +S+ +L + RRA ++
Sbjct: 70 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 129
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q R ID+ T G GI
Sbjct: 130 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPARDFIDHATRHVLLRQGVLGI 188
Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220
KV + +
Sbjct: 189 KVKIMRGSDPEGKSGPQKTLPD 210
>gi|223927989|gb|ACN23645.1| ribosomal protein S3 [Halimeda gigas]
Length = 155
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 40/140 (28%), Positives = 71/140 (50%), Gaps = 9/140 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S W+A Y + ED +R L +A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSHWYASKKYYSKYVLEDHFVRTLLSEKYNRARFEKIQISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111
+ I++Y+ +P ++IGKKG ++E +K++ NS++ + +
Sbjct: 61 IEDHLEIVIYAQKPDILIGKKGENLEIFQKQIKTFIFQYRQIEWNSKLKVILYIFQCKTS 120
Query: 112 NATLIAQSIAQQLERRVVFR 131
++ IA I + LE+R+ ++
Sbjct: 121 ASSAIADFIVEHLEKRIPYK 140
>gi|288191207|gb|ADC43956.1| ribosomal protein S3 [Luxemburgia octandra]
Length = 455
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 50/173 (28%), Positives = 85/173 (49%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E+++ +K G+ + I + + L G +++K+R LSN T
Sbjct: 283 KVMEFIEKFIKLGGIGEF---LKGIEMMIEIILRKKRLPYGYNSYLNEMKKMRSLLSNRT 339
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ +AQ I+ QL ++ FR + V+ M+ G +G+++
Sbjct: 340 NTTTLIESVKIQSVYQSASPLAQDISFQLRNKKRSFRSIFSKIVKDIPLVMKKGVEGIRI 399
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY TA T YG GIKV++S
Sbjct: 400 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYATAEVATRYGISGIKVWISY 452
>gi|272716761|gb|ACZ95683.1| ribosomal protein S3 [Ginkgo biloba]
Length = 578
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 48/145 (33%), Positives = 70/145 (48%), Gaps = 6/145 (4%)
Query: 66 IIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQ 123
I + + G ++ ++R LSN TN+ + E+ +A LIAQ I Q
Sbjct: 418 IGIILRNRRIPYGYNYYLNEVREMRSLLSNRTNTNTLIGSVEIESVYQSAFLIAQDIFFQ 477
Query: 124 LERRVV-FRRAMKRAVQ---SAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
L + FR + V+ S M G G+++ SGRL GAE++RTEC G+ R
Sbjct: 478 LRSKTRSFRSIFSQIVRDIPSVMPKGVRGIRICCSGRLKGAEIARTECRKYGKTSCNAFR 537
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSL 204
IDY A T YG G+KV++S
Sbjct: 538 HKIDYAFAKVFTRYGILGVKVWISY 562
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54
M +K+NPI RL +N + +S WF+ YG L+++D+ +R+Y + +
Sbjct: 1 MARKVNPISVRLNLNRSSDSSWFSDYY-YGKLVYQDVNLRDYFGLIRPPTRKTFGFRLGR 59
Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTD 83
+I K I ++ R + ++G
Sbjct: 60 CIIHHFPKRTFIHLFLPRRPRRLKRRGKS 88
>gi|223928036|gb|ACN23676.1| ribosomal protein S3 [Halimeda scabra]
Length = 165
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 47/166 (28%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L K+A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKHYSKYVLEDNFVRTILLEKYKRAKFEKIQISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN--MTNSEIHLSVN-----EVPKPEIN 112
+ I++++ +P + IGKK ++E +K++ +I + + + +
Sbjct: 61 IEDHLEIVIHAQKPDIXIGKKSENLEVFQKQIKKFIFQYRQIEWNSKLKVILYIFRCKNT 120
Query: 113 ATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155
A+ IA I + LE+RV ++ K+ +Q + A G+KV +G
Sbjct: 121 ASSIADFIVENLEKRVPYKVVFVLLKKHLQR-QKHSALGMKVQIAG 165
>gi|213410238|ref|XP_002175889.1| 40S ribosomal protein S3 [Schizosaccharomyces japonicus yFS275]
gi|212003936|gb|EEB09596.1| 40S ribosomal protein S3 [Schizosaccharomyces japonicus yFS275]
Length = 251
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 44/200 (22%), Positives = 81/200 (40%), Gaps = 13/200 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ L + G + + T II+ + ++G+KG
Sbjct: 14 ADGVFYAEL-------NEFFTRELSEEGYSGCEVRVTPSRSEIIIRATHTQDVLGEKGRR 66
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V + A +S+ +L + RRA ++
Sbjct: 67 IRELTALVQKRFKFAENTVELYAEKVQNRGLCAVAQCESLRYKLLAGLAVRRAAYGVLRY 126
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q ID T G G+
Sbjct: 127 VMEAGAKGCEVVISGKLRAA-RAKSMKFADGFMIHSGQPAVDFIDCATRHVLLRQGVLGV 185
Query: 199 KVYVSLRDEVSDSDSTIPAA 218
KV + L + + ++P A
Sbjct: 186 KVKIMLPEPKTRQKKSLPDA 205
>gi|14600662|ref|NP_147181.1| 30S ribosomal protein S3P [Aeropyrum pernix K1]
gi|6685919|sp|Q9YF78|RS3_AERPE RecName: Full=30S ribosomal protein S3P
gi|5104002|dbj|BAA79318.1| 30S ribosomal protein S3P [Aeropyrum pernix K1]
Length = 246
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 49/187 (26%), Positives = 90/187 (48%), Gaps = 4/187 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN- 96
KI E+L + +AG +++ + +T I +++ RP LIIG++G I ++++ +
Sbjct: 18 KIDEWLAQNFYEAGYSRVKVVQTSLGTNITIWAERPALIIGRRGATIRRLQEVFQTVFGL 77
Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156
+ V + P ++A + A IA+ +ER + FRR A+ M GA GV++ SG+
Sbjct: 78 PNPRIRVEQPENPMLDARVQAFRIARSIERGIHFRRVAFAAINRIMSNGALGVEITISGK 137
Query: 157 LNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
L +E +R E + G+V + +D +A A G G+ V + + D
Sbjct: 138 LT-SERARFEKFKAGKVYKSGHKVDELVDRASAYARLPKGVIGVDVIIVKPGKPGDHVRI 196
Query: 215 IPAAEHR 221
E +
Sbjct: 197 KSEEEVK 203
>gi|56180910|gb|AAV83552.1| ribosomal protein S3 [Halimeda cuneata]
gi|56180913|gb|AAV83554.1| ribosomal protein S3 [Halimeda cuneata]
Length = 160
Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 5/160 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ + S W+A +Y + ED IR L +A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPYLSNWYASKKDYSKYVLEDHLIRTLLFKKYNRAKFDKITIFRN 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINA----TL 115
+ I +Y+ +P +++G G + + K S + + + + + +
Sbjct: 61 IEDHVEIFIYAQKPEILLGTTGARQLQKQIKTSIFQHRKRNSRLKVILSIFCCKINASSA 120
Query: 116 IAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155
IA I + LERR+ ++ + + R G+KV SG
Sbjct: 121 IADFIVEHLERRIPYKVVLTLLKKYLKRNKPLGMKVKISG 160
>gi|327307562|ref|XP_003238472.1| 40S ribosomal protein S3 [Trichophyton rubrum CBS 118892]
gi|326458728|gb|EGD84181.1| 40S ribosomal protein S3 [Trichophyton rubrum CBS 118892]
gi|326470843|gb|EGD94852.1| 40S ribosomal protein S3 [Trichophyton tonsurans CBS 112818]
gi|326478407|gb|EGE02417.1| 40S ribosomal protein S3 [Trichophyton equinum CBS 127.97]
Length = 266
Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 43/202 (21%), Positives = 80/202 (39%), Gaps = 13/202 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ Q L + G + + + T II+ + ++G++G
Sbjct: 17 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 69
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V ++A +S+ +L + RRA ++
Sbjct: 70 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 129
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q R ID+ T G GI
Sbjct: 130 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPARDFIDHATRHVLLRQGVLGI 188
Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220
KV + +
Sbjct: 189 KVKIMRGSDPEGKSGPQKTLPD 210
>gi|272716705|gb|ACZ95654.1| ribosomal protein S3 [Pseudolarix amabilis]
Length = 556
Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 49/148 (33%), Positives = 73/148 (49%), Gaps = 7/148 (4%)
Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + + G ++ K+R LSN TN+ + ++ +A+LIAQ I
Sbjct: 409 GMMIEIILRNRRIPYGYNYYLNEVRKMRSLLSNRTNTNTFIGSVKIFN-YQSASLIAQDI 467
Query: 121 AQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
+ QL R FR + V+ M G G+++ SGRL GAE++RTEC G+
Sbjct: 468 SFQLRDRTRSFRSIFSQIVRDIPLVMPKGVRGIRICCSGRLKGAEIARTECREYGKTSCN 527
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSL 204
R IDY +A T YG G+KV++SL
Sbjct: 528 VFRHKIDYASAKVSTRYGILGVKVWISL 555
Score = 58.5 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54
M +K+NPI RL +N + +S WF+ YG L+++D+ +R+Y + +
Sbjct: 1 MARKVNPISVRLNLNRSSDSSWFSDYY-YGKLVYQDVNLRDYFGSIRPPTRKTFGFRLGR 59
Query: 55 ILIERTHKNCRIIVY 69
+I K I ++
Sbjct: 60 CIIHHFPKRTFIHLF 74
>gi|188038017|gb|ACD46635.1| ribosomal protein S3 [Phytophthora ramorum]
Length = 271
Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 58/250 (23%), Positives = 98/250 (39%), Gaps = 46/250 (18%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--HLKQAGVAKILIE 58
MGQKI PI RL WNS+W +EY LLH DL+I++Y Q + K + I I
Sbjct: 1 MGQKIIPISLRLNKKKNWNSKWIVNNNEYSNLLHFDLEIKKYFQNIFNYKNLKLIDINII 60
Query: 59 RTHKNCRIIVYSARPGLIIGK--------------KGTDIEKIRKKLSNMTNSEIHLSVN 104
+T KN + VY + +I+ K ++ ++
Sbjct: 61 KTSKNINVYVYIQKNAKKYYNLSYNKIINHLNLYYPNNNIKLFIKNTQFFEFLKLRKNLK 120
Query: 105 EVPK-----------------------PEINATLIAQSIAQQLERRVVFRRAMKRAVQSA 141
++ N +I I Q LER+ ++ + + +
Sbjct: 121 QIFDKIKKNNKINKNVKKMIYNFSYAFYTKNINIITFYIKQTLERKKTHKKFINN-IDNM 179
Query: 142 MRFGAD------GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGS 195
++ G ++ GRLN ++ + + +G++PL TL I Y +T G
Sbjct: 180 LQEFFKMFSNFIGYRLQFKGRLNKSKRKKKMVFQKGKIPLNTLEYDIKYHFNEFKTPSGI 239
Query: 196 CGIKVYVSLR 205
C IK++V +
Sbjct: 240 CSIKLWVFFK 249
>gi|48477718|ref|YP_023424.1| 30S ribosomal protein S3P [Picrophilus torridus DSM 9790]
gi|61215562|sp|Q6L1C1|RS3_PICTO RecName: Full=30S ribosomal protein S3P
gi|48430366|gb|AAT43231.1| small subunit ribosomal protein S3P [Picrophilus torridus DSM 9790]
Length = 217
Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 51/192 (26%), Positives = 96/192 (50%), Gaps = 5/192 (2%)
Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT- 95
L + EYL+ AG + ++RT I +Y RPGL+IG+ GT I+++ + L
Sbjct: 14 LLVSEYLRKENDNAGFGGMEMKRTPYGTNITLYVNRPGLVIGRHGTKIKEMTETLEKRFA 73
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155
+ V EV P++N + ++ IA LE+ +R+A +++ + A GV + G
Sbjct: 74 IESPQIEVKEVNTPDLNPQIASKKIALSLEKGWNYRKAGNTSLRKMIDLNAPGVLIRIGG 133
Query: 156 RLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
+++G E +R + ++ G++ + R+ ++YG + A+ G G+ V + + D
Sbjct: 134 KISG-ERARAQKFMFGKIKYSGEPARSGVEYGFSEAKLKTGIIGVSVRILKSNYRLPDDI 192
Query: 214 TI-PAAEHRVVE 224
I P + VE
Sbjct: 193 EIKPVKIEKEVE 204
>gi|218884480|ref|YP_002428862.1| 30S ribosomal protein S3P [Desulfurococcus kamchatkensis 1221n]
gi|218766096|gb|ACL11495.1| 30S ribosomal protein S3P [Desulfurococcus kamchatkensis 1221n]
Length = 223
Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 52/191 (27%), Positives = 94/191 (49%), Gaps = 4/191 (2%)
Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN 96
L I E+L + K AG A + + RT R+++++ PG +IG+ G+ I+K+ L N
Sbjct: 18 LMIDEFLAHYFKDAGYADVELYRTPTGYRVVIHAEYPGRLIGRGGSVIKKLSTILQNKFG 77
Query: 97 -SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155
++++++ V P++NA ++A I + LE+ + FRR M ++ M GA G ++I SG
Sbjct: 78 LDNVNITISPVIDPDLNARVVAFRIVRALEKEIPFRRVMMYMLKRVMDAGAIGAEIIISG 137
Query: 156 RLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
+L G E + E G+V + + +D A G G++V +
Sbjct: 138 KLRG-ERATYEKLKAGKVYKAGEPVEYMVDRAVVKALLKPGIFGVEVVIVKPGIKMPDHV 196
Query: 214 TIPAAEHRVVE 224
I + +E
Sbjct: 197 EIKTLKPEELE 207
>gi|56181338|gb|AAV83763.1| ribosomal protein S3 [Halimeda monile]
Length = 281
Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
+ +++ + +P ++IGKKG +++ +K++ +
Sbjct: 61 IEDHLELVLRAQKPEVLIGKKGENLKNFQKEIKKLIFK 98
>gi|302748657|gb|ADL63809.1| ribosomal protein S3 [Clethra barbinervis]
Length = 483
Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 51/178 (28%), Positives = 87/178 (48%), Gaps = 6/178 (3%)
Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90
LL +D K+ E ++ + G+ ++ I+ II+ + R +++K+R
Sbjct: 304 NLLGKD-KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNYYLNEVKKMRSL 361
Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGA 146
LSN TN+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G
Sbjct: 362 LSNRTNTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGV 421
Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
+G+++ SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 422 EGIRICCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 479
>gi|288191166|gb|ADC43936.1| ribosomal protein S3 [Tetrorchidium cf. macrophyllum Bell et al.
93-204]
Length = 505
Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 330 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 388
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 389 NTLIESVKIQSVYQSASPIAQDISFQLRNKTRAFRSIFSKIVKDIPLVMKKGVEGIRICC 448
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 449 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 499
>gi|302748753|gb|ADL63857.1| ribosomal protein S3 [Geissois biagiana]
Length = 507
Score = 105 bits (261), Expect = 7e-21, Method: Composition-based stats.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + GV ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 325 KVMELIEKFINLGGVGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 383
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 384 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 443
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 444 SGRSEGAEIARTECGKYGKTSRNIFNQKIDYAPAEVSTRYGISGVKVWISY 494
>gi|302749095|gb|ADL64027.1| ribosomal protein S3 [Tradescantia sp. Qiu 96059]
Length = 478
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ + ++ + G+ ++ I + + + G +++K+R L N T
Sbjct: 309 KVMKLIEKFIDLGGIGEL---IKGIEMMIEIILRKRIIPYGYNSYLNEVQKMRSFLFNRT 365
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQ---SAMRFGADGVKV 151
N+ + ++ +A+LIAQ I+ Q FR + V+ M G +G+++
Sbjct: 366 NTNTLIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSKIVKDIPLIMPKGVEGIRI 425
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 426 CCSGRLGGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGILGVKVRISY 478
>gi|56181334|gb|AAV83761.1| ribosomal protein S3 [Halimeda monile]
Length = 269
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
+ +++ + +P ++IGKKG +++ +K++ +
Sbjct: 61 IEDHLELVLRAQKPEVLIGKKGENLKNFQKEIKKLIFK 98
>gi|302748899|gb|ADL63929.1| ribosomal protein S3 [Nepenthes sp. 'Kosobe']
Length = 481
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ + + + G+ + LI+ II+ + + +++K+R LSN TN+
Sbjct: 308 KVMKLIAKFIDLGGI-RELIKGIEMMIEIILKNRKIPYGYNSYLNEVKKMRSLLSNRTNT 366
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + + FR + V+ M+ G +G+++
Sbjct: 367 NTLIESVKIKSVYQSASPIAQDISFQPKNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 426
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY +A T YG G+KV++S
Sbjct: 427 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYASAEVSTRYGILGVKVWISY 477
>gi|15897617|ref|NP_342222.1| 30S ribosomal protein S3P [Sulfolobus solfataricus P2]
gi|284174942|ref|ZP_06388911.1| 30S ribosomal protein S3P [Sulfolobus solfataricus 98/2]
gi|11134364|sp|Q9UXA0|RS3_SULSO RecName: Full=30S ribosomal protein S3P
gi|6015765|emb|CAB57592.1| ribosomal protein S3 (HMAS3) [Sulfolobus solfataricus P2]
gi|13813882|gb|AAK41012.1| SSU ribosomal protein S3AB (rps3AB) [Sulfolobus solfataricus P2]
gi|261602385|gb|ACX91988.1| ribosomal protein S3 [Sulfolobus solfataricus 98/2]
Length = 229
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 55/185 (29%), Positives = 94/185 (50%), Gaps = 4/185 (2%)
Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN 96
+KI EYL A A + + +T R+I+Y+ RP +IIG+ G +I+++ + +
Sbjct: 16 VKIDEYLAKQYYNAEYAGVEVLKTPIGTRVIIYAGRPSMIIGRGGRNIKQLAQIFEKVFG 75
Query: 97 -SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155
+++ V PE+NA ++A +A LE+ FRRA +++ M GA G ++I SG
Sbjct: 76 LENPQITITNVENPELNARVMAFRLAIALEKGYHFRRAAFISMRRIMNAGALGAEIIISG 135
Query: 156 RLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
+L E +R E EG V Q L ID A+A G G++V ++ ++ D +
Sbjct: 136 KLT-TERARYEKLKEGIVYKSGQQLEKMIDRAIAIAMLKPGIFGVEVVITKPLKIEDKIN 194
Query: 214 TIPAA 218
+
Sbjct: 195 LKESP 199
>gi|261197469|ref|XP_002625137.1| 40S ribosomal protein S3 [Ajellomyces dermatitidis SLH14081]
gi|239595767|gb|EEQ78348.1| 40S ribosomal protein S3 [Ajellomyces dermatitidis SLH14081]
gi|239606762|gb|EEQ83749.1| 40S ribosomal protein S3 [Ajellomyces dermatitidis ER-3]
gi|327351227|gb|EGE80084.1| hypothetical protein BDDG_03025 [Ajellomyces dermatitidis ATCC
18188]
Length = 270
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 43/202 (21%), Positives = 81/202 (40%), Gaps = 13/202 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ Q L + G + + + T II+ + ++G++G
Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V ++A +S+ +L + RRA ++
Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q +R ID T G GI
Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQGVLGI 187
Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220
KV + + +
Sbjct: 188 KVKIMRGSDPEGKSGPQKSLPD 209
>gi|154301908|ref|XP_001551365.1| 40S ribosomal protein S3 [Botryotinia fuckeliana B05.10]
gi|150855583|gb|EDN30775.1| 40S ribosomal protein S3 [Botryotinia fuckeliana B05.10]
Length = 263
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 44/214 (20%), Positives = 83/214 (38%), Gaps = 18/214 (8%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ Q L + G + + + T II+ + ++G++G
Sbjct: 18 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 70
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V ++A +S+ +L + RRA ++
Sbjct: 71 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 130
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q + ID+ T G GI
Sbjct: 131 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLKQGVLGI 189
Query: 199 KVYVSLRDEVSDSDSTIPAAEH-----RVVEKDS 227
KV + + E+ S
Sbjct: 190 KVKIMRGSDPEGKSGPSKGLPDSVTIIEPKEEQS 223
>gi|56181336|gb|AAV83762.1| ribosomal protein S3 [Halimeda monile]
Length = 269
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
+ +++ + +P ++IGKKG +++ +K++ +
Sbjct: 61 IEDHLELVLRAQKPEVLIGKKGENLKNFQKEIKKLIFK 98
>gi|272716548|gb|ACZ95561.1| ribosomal protein S3 [Sciadopitys verticillata]
Length = 786
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 2/142 (1%)
Query: 66 IIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLE 125
II+ + R ++ K+R LS+ TN+ + ++ +A+ IAQ I+ +L
Sbjct: 645 IILKNRRIPYAYNYYLNEVRKMRSLLSDRTNTHTFIGSVKIESVYQSASPIAQDISLKLR 704
Query: 126 RRVV-FRRAMKRAVQSAMR-FGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHID 183
R FR + V+ R G G+++ SGR GAE++RTEC G+ ID
Sbjct: 705 DRTRSFRSIFNQIVREMPRGQGVRGIRICCSGRSKGAEIARTECREYGKTSCNAFCHKID 764
Query: 184 YGTAVAETAYGSCGIKVYVSLR 205
Y A T YG G+KV++
Sbjct: 765 YAYAKVSTRYGILGVKVWIPFP 786
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 39/90 (43%), Gaps = 17/90 (18%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL----------------Q 44
M K+NPI RL +N + +S WF+ YG +++D+ +REY +
Sbjct: 1 MAPKVNPISVRLHLNRSSDSSWFSDYY-YGQFMYQDVNLREYFGSIRSPTRKRKRKRKRK 59
Query: 45 CHLKQAGVAKILIERTHKNCRIIVYSARPG 74
+ + + ++ + K I ++ R
Sbjct: 60 SNSLGFRLGRCILHHSPKRTFIHLFIPRRP 89
>gi|156051430|ref|XP_001591676.1| ribosomal protein S3 [Sclerotinia sclerotiorum 1980]
gi|154704900|gb|EDO04639.1| ribosomal protein S3 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 263
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 44/214 (20%), Positives = 83/214 (38%), Gaps = 18/214 (8%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ Q L + G + + + T II+ + ++G++G
Sbjct: 18 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 70
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V ++A +S+ +L + RRA ++
Sbjct: 71 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 130
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q + ID+ T G GI
Sbjct: 131 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLKQGVLGI 189
Query: 199 KVYVSLRDEVSDSDSTIPAAEH-----RVVEKDS 227
KV + + E+ S
Sbjct: 190 KVKIMRGSDPEGKSGPSKGLPDSVTIIEPKEEQS 223
>gi|302748709|gb|ADL63835.1| ribosomal protein S3 [Diospyros virginiana]
Length = 503
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 51/178 (28%), Positives = 87/178 (48%), Gaps = 6/178 (3%)
Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90
LL +D K+ E ++ + G+ + I+ II+ + R +++K+R
Sbjct: 324 NLLGKD-KVMELIEKFIDLGGIGEF-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSL 381
Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGA 146
LSN TN++ + ++ +A+ IAQ I+ Q + FR + V+ M+ G
Sbjct: 382 LSNRTNTKTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGV 441
Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
+G+++ SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 442 EGIRICCSGRSEGAEIARTECGKYGKASRNVFNQKIDYAPAEVSTRYGISGVKVWISY 499
>gi|288191215|gb|ADC43960.1| ribosomal protein S3 [Aporusa frutescens]
Length = 502
Score = 104 bits (260), Expect = 8e-21, Method: Composition-based stats.
Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 327 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 385
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + + + M+ G +G+++
Sbjct: 386 NTLIESVKIQSVYQSASPIAQDISFQLRNKTRSFRSISSKIVKDIPLVMKKGVEGIRICC 445
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 446 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 496
>gi|302748856|gb|ADL63908.1| ribosomal protein S3 [Maesa japonica]
Length = 483
Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats.
Identities = 51/178 (28%), Positives = 86/178 (48%), Gaps = 6/178 (3%)
Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90
LL +D K+ E ++ + G+ ++ I II+ + R +++K+R
Sbjct: 304 NLLGKD-KVMELIEKFIDLGGIGEL-IRGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSL 361
Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGA 146
LSN TN+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G
Sbjct: 362 LSNRTNTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGV 421
Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
+G+++ SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 422 EGIRICCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 479
>gi|302748593|gb|ADL63777.1| ribosomal protein S3 [Bruguiera gymnorhiza]
Length = 507
Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats.
Identities = 49/171 (28%), Positives = 86/171 (50%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + + +++K+R LSN TN+
Sbjct: 325 KVMELIEKFINLGRIGEL-IKGIEMMIEIILRNRKIPYGYNSYLNEMQKMRSLLSNRTNT 383
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ + ++ +A+ IAQ I+ QL ++ FR + V+ M+ G +G+++
Sbjct: 384 KTLIESVKIQSVYQSASPIAQDISFQLRNKKRSFRSIFTKIVKDIPLVMKKGVEGIRICC 443
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ L IDY A T YG GIKV++S
Sbjct: 444 SGRSEGAEIARTECGKYGKTSLNVFNQKIDYAPAEVSTRYGISGIKVWISY 494
>gi|272716517|gb|ACZ95538.1| ribosomal protein S3 [Podocarpus macrophyllus]
Length = 618
Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats.
Identities = 57/213 (26%), Positives = 93/213 (43%), Gaps = 21/213 (9%)
Query: 9 LF-RLGVNCT---WNSRWFARGSEYGALLHEDLKI-REYLQCHLKQ-AGVAKILIERTHK 62
F R+G T W S+ LL +I R++ ++ + +G K +I
Sbjct: 409 GFQRIGGARTYLLWRSK----KKILTYLLRRSKEILRKHFHTYIHKGSGSVKKVILGRIG 464
Query: 63 N------CRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINAT 114
+ + G+ G +++K+R LS TN+ + ++ +A+
Sbjct: 465 GVMRGIEMMLEIRLRGAGIPYGYNYYLNEVQKMRSLLSGRTNTNTFIGSVKIKSVYQSAS 524
Query: 115 LIAQSIAQQLERRVVFRRAMK---RAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEG 171
IAQ I+ +L R FR R + M G+++ SGRL GAE++RTEC G
Sbjct: 525 PIAQDISSRLRDRKSFRSIFYEPVRDIPLVMLKRVGGIRICCSGRLKGAEIARTECMEYG 584
Query: 172 RVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
+ R IDY +A T YG G+KV++S
Sbjct: 585 KTSCNAFRHRIDYASARVSTRYGILGVKVWISF 617
Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 3 QKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL-------QCHLKQAGVAKI 55
QK+NPI RL +N + +S WF+ YG L+++D+ R+Y + + + +
Sbjct: 42 QKVNPISVRLHLNRSSDSSWFSDHY-YGKLVYQDVNPRDYFGSIRPPTRRNPFGFRLGRC 100
Query: 56 LIERTHKNCRIIVYSARPG 74
++ + K I ++ R
Sbjct: 101 ILHHSPKRAFIHLFLPRRP 119
>gi|288191196|gb|ADC43951.1| ribosomal protein S3 [Lacistema aggregatum]
Length = 516
Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 7/173 (4%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 339 KVMELIEKLINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 397
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSAM-----RFGADGVKV 151
+ ++ +A+ IAQ I+ QL + FR + V+ G +G+++
Sbjct: 398 NTLIESVKIQSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGKGVEGIRI 457
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 458 CCSGRSEGAEIARTECGKYGKTSCNVFNQKIDYAPAEVSTRYGISGVKVWISY 510
>gi|226289773|gb|EEH45257.1| 40S ribosomal protein S3 [Paracoccidioides brasiliensis Pb18]
Length = 270
Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats.
Identities = 43/202 (21%), Positives = 81/202 (40%), Gaps = 13/202 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ Q L + G + + + T II+ + ++G++G
Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V ++A +S+ +L + RRA ++
Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q +R ID T G GI
Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQGVLGI 187
Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220
KV + + +
Sbjct: 188 KVKIMRGSDPEGKSGPQKSLPD 209
>gi|272716509|gb|ACZ95532.1| ribosomal protein S3 [Dacrydium elatum]
Length = 614
Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats.
Identities = 50/196 (25%), Positives = 86/196 (43%), Gaps = 13/196 (6%)
Query: 22 WFARGSEYGALLHEDLKI-REYLQCHLKQAG-------VAKILIERTHKNCRIIVYSARP 73
W ++ LL +I R++ ++ + + +I + +
Sbjct: 418 WRSKKKILTYLLRRSKEILRKHFNTYIHKGSGSVKKVILGRIEGVMRGIEMMLEIRLRGA 477
Query: 74 GLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFR 131
G+ G +++K+R LS TN+ + ++ +A+ IAQ I+ +L R FR
Sbjct: 478 GIPYGYNYYLNEVQKMRSLLSGRTNTNTFIGSVKIKSVYQSASPIAQDISFRLRDRKSFR 537
Query: 132 RAMK---RAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAV 188
R + M G+++ SGRL GAE++RTEC G+ R IDY +A
Sbjct: 538 SIFYEPVRDIPLVMLKRVGGIRICCSGRLRGAEIARTECMEYGKTSCNAFRHRIDYASAK 597
Query: 189 AETAYGSCGIKVYVSL 204
T YG G+KV++S
Sbjct: 598 VSTRYGILGVKVWISF 613
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/100 (21%), Positives = 40/100 (40%), Gaps = 8/100 (8%)
Query: 3 QKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL-------QCHLKQAGVAKI 55
QK+NPI RL +N + +S WF YG L+++D+ R+Y + + + +
Sbjct: 42 QKVNPISVRLHLNRSSDSSWFGDHY-YGKLVYQDVNPRDYFGSIRPPTRRNPFGFRLGRC 100
Query: 56 LIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95
++ + K I ++ R + G
Sbjct: 101 ILHHSPKRTFIHLFLPRRPPLNSNSGGGQRGRSGPGKRRW 140
>gi|288191198|gb|ADC43952.1| ribosomal protein S3 [Lozania pittieri]
Length = 516
Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 7/173 (4%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 339 KVMELIEKLINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 397
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSAM-----RFGADGVKV 151
+ ++ +A+ IAQ I+ QL + FR + V+ G +G+++
Sbjct: 398 NTLIESVKIQSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGKGVEGIRI 457
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 458 CCSGRSEGAEIARTECGKYGKTSCNVFNQKIDYAPAEVSTRYGISGVKVWISY 510
>gi|56181045|gb|AAV83642.1| ribosomal protein S3 [Halimeda tuna]
gi|56181051|gb|AAV83646.1| ribosomal protein S3 [Halimeda tuna]
gi|56181054|gb|AAV83648.1| ribosomal protein S3 [Halimeda tuna]
gi|56181057|gb|AAV83650.1| ribosomal protein S3 [Halimeda tuna]
gi|223928066|gb|ACN23696.1| ribosomal protein S3 [Halimeda tuna]
gi|223928069|gb|ACN23698.1| ribosomal protein S3 [Halimeda tuna]
Length = 165
Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats.
Identities = 47/166 (28%), Positives = 84/166 (50%), Gaps = 12/166 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L K+A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKRHYSKYVLEDNFVRTILSEKYKRAKFEKIKISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN--MTNSEIHLSVN-----EVPKPEIN 112
+ I++++ +P ++IGKK ++E +K++ +I + + + +
Sbjct: 61 IEDHLEIVIHAQKPDILIGKKSENLEVFQKQIKKFIFQYRQIEWNSKLKVILYIFRCKNT 120
Query: 113 ATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155
A+ IA I + LE+RV ++ K+ +Q + A G+KV +G
Sbjct: 121 ASSIADFIVEHLEKRVPYKVVFVLLKKHLQR-QKHSALGMKVQIAG 165
>gi|295670700|ref|XP_002795897.1| 40S ribosomal protein S3 [Paracoccidioides brasiliensis Pb01]
gi|226284030|gb|EEH39596.1| 40S ribosomal protein S3 [Paracoccidioides brasiliensis Pb01]
Length = 270
Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats.
Identities = 43/202 (21%), Positives = 81/202 (40%), Gaps = 13/202 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ Q L + G + + + T II+ + ++G++G
Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V ++A +S+ +L + RRA ++
Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q +R ID T G GI
Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQGVLGI 187
Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220
KV + + +
Sbjct: 188 KVKIMRGSDPEGKSGPQKSLPD 209
>gi|223928042|gb|ACN23680.1| ribosomal protein S3 [Halimeda tuna]
Length = 165
Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats.
Identities = 47/166 (28%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S W+A Y + ED +R L K+A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSXWYASKRHYSKYVLEDNFVRTILSEKYKRAKFEKIKISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN--MTNSEIHLSVN-----EVPKPEIN 112
+ I++++ +P ++IGKK ++E +K++ +I + + + +
Sbjct: 61 IEDHLEIVIHAQKPDILIGKKSENLEVFQKQIKKFIFQYRQIEWNSKLKVILYIFRCKNT 120
Query: 113 ATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155
A+ IA I + LE+RV ++ K+ +Q + A G+KV +G
Sbjct: 121 ASSIADFIVEHLEKRVPYKVVFVLLKKHLQR-QKHSALGMKVQIAG 165
>gi|288191148|gb|ADC43927.1| ribosomal protein S3 [Hura crepitans]
Length = 490
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 50/171 (29%), Positives = 86/171 (50%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 315 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 373
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ +L +R FR + V+ M+ G +G+++
Sbjct: 374 NTLIESVKIQSVYQSASPIAQDISLKLRNKRRSFRSIFSKIVKDIPLVMKKGVEGIRICC 433
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 434 SGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 484
>gi|56181009|gb|AAV83618.1| ribosomal protein S3 [Halimeda lacunalis]
gi|56181012|gb|AAV83620.1| ribosomal protein S3 [Halimeda lacunalis]
gi|223928009|gb|ACN23658.1| ribosomal protein S3 [Halimeda lacunalis]
Length = 168
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 15/169 (8%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A + Y + ED IR L K+A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKTNYSKYVLEDNFIRTILSEKYKRAKFVKIQISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKK-----GTDIEKIRKKLSNMTNSEIHLSVN-----EVPKP 109
+ I++++ +P ++IGKK I + + K I + + +
Sbjct: 61 IEDHLEIVIHAQKPDILIGKKIDSRESLKIFQKQIKKFIFQYRGIEWNSKLKVILYIFRC 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155
+ +A+ IA I + LE+RV ++ K+ +Q + A G+K++ SG
Sbjct: 121 KTSASSIADFIVEHLEKRVPYKVVFVLLKKHLQR-QKHSALGMKILISG 168
>gi|56181344|gb|AAV83766.1| ribosomal protein S3 [Halimeda monile]
Length = 263
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 1/98 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
+ +++ + +P ++IGKKG +++ +K++ +
Sbjct: 61 IEDHLELVLRAQKPEVLIGKKGENLKNFQKEIKKLIFK 98
>gi|322693782|gb|EFY85631.1| 40S ribosomal protein S3, putative [Metarhizium acridum CQMa 102]
Length = 255
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 42/202 (20%), Positives = 81/202 (40%), Gaps = 13/202 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ Q L + G + + + T II+ + + ++G++G
Sbjct: 14 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATQTQEVLGEQGRR 66
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V ++A +S+ +L + RRA ++
Sbjct: 67 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 126
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q + ID T G GI
Sbjct: 127 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKEFIDTATRHVLLRQGVLGI 185
Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220
KV + + +
Sbjct: 186 KVKIMRGSDPDGKAGPSKSLPD 207
>gi|302749053|gb|ADL64006.1| ribosomal protein S3 [Stegnosperma halimifolium]
Length = 481
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 47/173 (27%), Positives = 85/173 (49%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ + ++ + G+ ++ I + + + G +++K+R LSN T
Sbjct: 308 KVMKLIEKFIDLGGIEEL---IKGIEMMIEIILKKRRIPYGYNSYLNEVKKMRSLLSNRT 364
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLER-RVVFRRAMKRAVQSA---MRFGADGVKV 151
+ + ++ +A+ IAQ I+ Q ++ R FR + V+ M+ G +G+++
Sbjct: 365 ATNTLIESVKIKSVYQSASPIAQDISFQPKKKRRSFRSIFSKIVKDIPLVMKRGVEGIRI 424
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ L IDY +A T YG G+KV++S
Sbjct: 425 CCSGRLEGAEIARTECGKYGKTSCNVLDHKIDYASAEVSTRYGILGVKVWISY 477
>gi|302748707|gb|ADL63834.1| ribosomal protein S3 [Dioscorea sp. Qiu 94044]
Length = 477
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 49/170 (28%), Positives = 83/170 (48%), Gaps = 5/170 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E+++ + G+ ++ I+ +II+ + R +++K+R LSN T +
Sbjct: 309 KVMEFIEKFIDLGGIGEL-IKGIEMMIKIILRNRRIPYGYNSYFNEVQKMRSFLSNRTKT 367
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQ---SAMRFGADGVKVIA 153
+ ++ +A+LIAQ I+ Q FR + V+ M G +G+++
Sbjct: 368 NTLIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSKIVKDIPLIMPKGVEGIRICC 427
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGRL GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 428 SGRLGGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 477
>gi|288191211|gb|ADC43958.1| ribosomal protein S3 [Sauvagesia erecta]
Length = 453
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 52/171 (30%), Positives = 86/171 (50%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ LK G+ ++ I+ II+ R +++K+R LSN TN+
Sbjct: 281 KVMELIEKFLKLGGIGEL-IKGIEMMIEIILRKKRIPYGYNSYLNEMKKMRSLLSNRTNT 339
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ +AQ I+ QL ++ FR + V+ M+ G +G+++
Sbjct: 340 TTLIESVKIQSVYQSASPLAQDISFQLRNKKKSFRSIFSKIVKDIPLVMKKGVEGIRISC 399
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY TA T YG GIKV++S
Sbjct: 400 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYATAEVATRYGISGIKVWISY 450
>gi|153805619|ref|YP_001382203.1| ribosomal protein S3 [Leptosira terrestris]
gi|134270150|gb|ABO69339.1| ribosomal protein S3 [Leptosira terrestris]
Length = 325
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 47/190 (24%), Positives = 77/190 (40%), Gaps = 38/190 (20%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FR+G+ S WF+ +Y + ED IR + A +++I I+RT
Sbjct: 1 MGQKVHPLGFRVGITKKHRSLWFSNSKQYPQSVLEDYVIRNNILKTFPSAEISEIHIQRT 60
Query: 61 -------HKNCRIIVYSARPGLIIGKKGTDIEKIRK------------------------ 89
II+YS +P ++G K + K+RK
Sbjct: 61 HHDIESSPNGLIIIIYSKKPNQLVGNKHEKLHKLRKILKQKLTLNRSLIKPKGQVFLNSS 120
Query: 90 -------KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAM 142
L I V E+ P +A I +I QQL+ R +R +K+ +
Sbjct: 121 WRDFSKILLQKQKTDRIKFLVREITTPYSSAFCIGNAIVQQLQDRQRYRFVIKKVIAEVK 180
Query: 143 RFGADGVKVI 152
+ + +K I
Sbjct: 181 KERKENLKTI 190
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 52/197 (26%), Positives = 88/197 (44%), Gaps = 24/197 (12%)
Query: 19 NSRWFARGSEYGALLHEDLK-------IREYLQCHLKQAGVAKILIERTHKNCRIIVYSA 71
NS W ++ +L + K +RE + A I + ++ +
Sbjct: 118 NSSW----RDFSKILLQKQKTDRIKFLVRE-ITTPYSSAFCIGNAIVQQLQDRQ------ 166
Query: 72 RPGLIIGKKGTDIEKIRKKLSN-MTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVF 130
R +I K +++K RK+ + + + + P + + LE +
Sbjct: 167 RYRFVIKKVIAEVKKERKENLKTIQPTNTNKVITSREIPTMEFPAALEKAQNPLEYNL-- 224
Query: 131 RRAMKRAVQ--SAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAV 188
A ++ Q S+ + G+K+ +GRLNGAE++RTE + +GRVPL TL+A IDY
Sbjct: 225 -SAFNQSKQDKSSYQVPIKGLKIQLAGRLNGAEIARTEWFRKGRVPLHTLKADIDYSYQK 283
Query: 189 AETAYGSCGIKVYVSLR 205
A T YG G+KV+V
Sbjct: 284 AYTKYGIIGVKVWVFNG 300
>gi|302749031|gb|ADL63995.1| ribosomal protein S3 [Simmondsia chinensis]
Length = 483
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 84/171 (49%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ + ++ + G+ + LI+ II+ + R +++K+R LSN T +
Sbjct: 310 KVMKLIEKFIDLGGI-RELIKGIEMMIEIILKNRRIPYGYNSYLNEVKKMRSLLSNRTKT 368
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + + FR + V+ M+ G +G+++
Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQPKNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 428
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY +A T YG G+KV++S
Sbjct: 429 SGRSEGAEIARTECGKYGKTSCNLFNQKIDYASAEVSTRYGILGVKVWISY 479
>gi|223927407|gb|ACN23327.1| ribosomal protein S3 [Halimeda velasquezii]
Length = 198
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 52/201 (25%), Positives = 85/201 (42%), Gaps = 47/201 (23%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y L ED +R L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYLLEDNFLRTILPKKYNKAGFEKIKISRK 60
Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNM------------------------- 94
+ I++ + +P ++IGKKG ++E +K++ N+
Sbjct: 61 IEGHIEIVINAQKPDILIGKKGENLEAFQKEIKNLLSSTDRSKALPHKHLHLQSSNLGKS 120
Query: 95 ------------TNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM---KRAVQ 139
++ L V NA+ IA + + LE+RV ++ K+ +Q
Sbjct: 121 RALKQQPPLPEPNKLKVILYVIRCKN---NASSIADFLIENLEKRVPYKLVFVLLKKHLQ 177
Query: 140 S---AMRFGADGVKVIASGRL 157
G+K+ SGRL
Sbjct: 178 KQHQKQSAIGQGMKIQISGRL 198
>gi|288191205|gb|ADC43955.1| ribosomal protein S3 [Lophira lanceolata]
Length = 453
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ +K G+ ++ I + + + G +++K+R LSN T
Sbjct: 281 KVMELIEKFIKLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEMKKMRSLLSNRT 337
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ +AQ I+ QL ++ FR + V+ M+ G +G+++
Sbjct: 338 NTTTLIESVKIKSVYQSASPLAQDISFQLRNKKRSFRSIFSKIVKDIPLVMKKGVEGIRI 397
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY TA T YG GIKV++S
Sbjct: 398 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYATAEVATRYGISGIKVWISY 450
>gi|77556439|gb|ABA99235.1| Mitochondrial ribosomal protein S3, putative, expressed [Oryza
sativa Japonica Group]
Length = 748
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + + K+ I + + + G +++K+R LSN T
Sbjct: 369 KVMELIEKFIYLGRIGKL---IKGIEMMIEIILRKRIIPYGYNSYLNEVQKMRSFLSNRT 425
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERR-VVFRRAMKRAVQ---SAMRFGADGVKV 151
N+ + ++ +A+LIAQ I+ QL + FR + V+ M G +G+++
Sbjct: 426 NTNTLIESVKIKSVYQSASLIAQDISFQLGNNPISFRSIFSQIVKDIPLIMPKGVEGIRI 485
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T G G+KV +S
Sbjct: 486 CCSGRLGGAEIARTECGKYGKTSCNVFNQKIDYALAEVSTRNGISGVKVRISY 538
>gi|130076586|gb|ABO31951.1| ribosomal protein S3 [Penthorum sedoides]
Length = 508
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 327 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 385
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++
Sbjct: 386 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIPLVMKKGVEGIRICC 445
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 446 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 496
>gi|302748525|gb|ADL63743.1| ribosomal protein S3 [Albizia julibrissin]
Length = 494
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 11/174 (6%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E + + + + I + + G +++K+R LSN T
Sbjct: 320 KVMELIDKLIDLGRIGE---WIKGIEMMIEIILRNRKIPYGYNSYLNEVKKMRSLLSNRT 376
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLER-----RVVFRRAMKRAVQSAMRFGADGVK 150
N+ + ++ +A+ IAQ I+ QL + R +F R +K + M+ G +G++
Sbjct: 377 NTNTLIESVKIKSVYQSASPIAQDISFQLRKKTRSFRSIFSRIVKD-IPLVMKKGVEGIR 435
Query: 151 VIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
+ SGR GAE++RTEC G+ IDY +A T YG G+KV++S
Sbjct: 436 ICCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYASAEVSTRYGISGVKVWISY 489
>gi|130076588|gb|ABO31952.1| ribosomal protein S3 [Peridiscus lucidus]
Length = 411
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 46/181 (25%), Positives = 81/181 (44%), Gaps = 11/181 (6%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + + ++ I + + G +++K+R LSN T
Sbjct: 232 KVMELIEKFIDLGRIGEL---IKGIEMMIEIILRNRIIPYGYNSYLNEVKKMRSLLSNRT 288
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLER-----RVVFRRAMKRAVQSAMRFGADGVK 150
N + ++ +A+ IAQ I+ Q R +F + +K + M+ G +G++
Sbjct: 289 NXNTLIESVKIKSVYQSASPIAQDISFQPRNXTRSFRSIFSKIVKD-IPLVMKKGVEGIR 347
Query: 151 VIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210
+ SGRL GAE++RTEC G+ IDY A T YG G+KV++S +
Sbjct: 348 ICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWISYSKKKGG 407
Query: 211 S 211
Sbjct: 408 R 408
>gi|302749061|gb|ADL64010.1| ribosomal protein S3 [Strelitzia reginae]
Length = 481
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 81/173 (46%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E+++ + G+ ++ I + + + G +++K+R LSN T
Sbjct: 312 KVMEFIEKFIDLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEVQKMRSFLSNRT 368
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQ---SAMRFGADGVKV 151
N+ + ++ +A+LIAQ I+ Q FR + V+ M G +G+++
Sbjct: 369 NTNTLIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSKIVKDIPLIMPKGVEGIRI 428
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 429 CCSGRLGGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRISY 481
>gi|223927410|gb|ACN23329.1| ribosomal protein S3 [Halimeda minima]
Length = 199
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 31/95 (32%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG K+ I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYVLEDNFLRTILPKKYNKAGFEKMKISRK 60
Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNM 94
+ I++ + +P ++IGKKG ++E +K++ +
Sbjct: 61 IEGHIEIVINAQKPDILIGKKGENLEAFQKEIKKL 95
>gi|302748529|gb|ADL63745.1| ribosomal protein S3 [Allium cepa]
Length = 370
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 47/173 (27%), Positives = 78/173 (45%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + +I + I + + + G +++K+R LSN T
Sbjct: 190 KVMELIEKFID---PGRIGLLIKGIEMMIEIILRKRIIPYGYNSYLNEVQKMRSFLSNRT 246
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRA---MKRAVQSAMRFGADGVKV 151
N+ + ++ +A+LIAQ I+ Q FR + + + M G +G+++
Sbjct: 247 NTNTLIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSIIVKDIPLIMPKGVEGIRI 306
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G IDY A T YG G+KV +S
Sbjct: 307 CCSGRLGGAEIARTECGKYGETSRNVFNQKIDYAPAEVSTRYGISGVKVRISY 359
>gi|262186719|ref|YP_003275978.1| ribosomal protein S3 [Pleurozia purpurea]
gi|237780716|gb|ACR19362.1| ribosomal protein S3 [Pleurozia purpurea]
Length = 428
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 284 RYYYLKKMQSLFSNRTKTNTLIQPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 343
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TEC G L IDY A T YG G+
Sbjct: 344 QIKKCSYVKGIRIGCSGRLNGAEIAKTECKKYGETSLHVFSDQIDYAKTQASTPYGILGV 403
Query: 199 KVYVSL 204
KV+VS
Sbjct: 404 KVWVSY 409
Score = 65.8 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/110 (23%), Positives = 45/110 (40%), Gaps = 7/110 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54
M QK+NPI RL +N + +S WF+ YG LL++DL R+Y + + +
Sbjct: 1 MAQKVNPISVRLNLNRSSDSSWFSDYY-YGKLLYQDLNFRDYFGSIRPPTGNTFGFRLGR 59
Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVN 104
+I K I V+ +G K + + ++ +
Sbjct: 60 CIIHHFPKRTFIHVFFLDRLSQSRHQGLGAIPSVKLIGRINDNTVKQRNE 109
>gi|543683|pir||S40458 ribosomal protein S3 - Chlamydomonas peterfii chloroplast
(fragment)
Length = 807
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 49/149 (32%), Positives = 73/149 (48%), Gaps = 1/149 (0%)
Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINA 113
KI T N ++ + + + + L+ I + A
Sbjct: 659 KIEKVLTKSNQKVDFDKNLQDAFLDQVENQRKMYKANLALTPKISIQFFSVKQDNLFEKA 718
Query: 114 TLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGA-DGVKVIASGRLNGAELSRTECYLEGR 172
+++A S+ LE+ FR +K+A + MR GVK+ +GRLNGAE++R+E GR
Sbjct: 719 SVVADSVVDALEKCKAFRGVIKKAKEDLMRRSRVKGVKIQVAGRLNGAEIARSEWVRAGR 778
Query: 173 VPLQTLRAHIDYGTAVAETAYGSCGIKVY 201
VPLQTLRA+IDY A T YG G+KV+
Sbjct: 779 VPLQTLRANIDYSYRTASTIYGIIGVKVW 807
Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFA--RGSEYGALLHEDLKIREYLQCHLKQ 49
MGQK++P+ FR+G+ S+WFA Y + ED +R+ L
Sbjct: 1 MGQKVHPLGFRVGITKKHQSQWFARFNKYAYAQSVVEDFMLRKTLMKMFPD 51
>gi|223928006|gb|ACN23656.1| ribosomal protein S3 [Halimeda lacunalis]
Length = 168
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 48/169 (28%), Positives = 83/169 (49%), Gaps = 15/169 (8%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A + Y + ED IR L K+A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKTNYSKYVLEDNFIRTILSEKYKRAKFVKIQIXRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKK-----GTDIEKIRKKLSNMTNSEIHLSVN-----EVPKP 109
+ I++++ +P ++IGKK I + + K I + + +
Sbjct: 61 IEDHLEIVIHAQKPDILIGKKIDSRESLKIFQKQIKKFIFQYRGIEWNSKLKVILYIFRC 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155
+ +A+ IA I + LE+RV ++ K+ +Q + A G+K++ SG
Sbjct: 121 KTSASSIADFIVEHLEKRVPYKVVFVLLKKHLQR-QKHSALGMKILISG 168
>gi|302749085|gb|ADL64022.1| ribosomal protein S3 [Tetramerista sp. Coode 7925]
Length = 485
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 50/178 (28%), Positives = 88/178 (49%), Gaps = 6/178 (3%)
Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90
LL +D K+ E ++ + G+ ++ I+ II+ + R +++K+R
Sbjct: 306 NLLGKD-KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNYYLNEVKKMRSL 363
Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGA 146
LSN + + ++ +A+ IAQ I+ Q ++ FR + V++ M+ G
Sbjct: 364 LSNRAKTNTLIESVKIKSVYQSASPIAQDISFQPRKKTRSFRSIFSKIVKNIKLVMKKGV 423
Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
+G+++ SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 424 EGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 481
>gi|56181042|gb|AAV83640.1| ribosomal protein S3 [Halimeda tuna]
Length = 175
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 20/175 (11%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILI-ER 59
MGQK++P+ FR+G+ S+W+A Y + ED IR L K+A +KI I +
Sbjct: 1 MGQKVHPLGFRVGITQPHLSQWYASKKYYSQYVLEDNFIRTILLKKYKRANFSKIHISRK 60
Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT-------NSEIHLSVNEVPKPEIN 112
T + I++++ G++IG K ++ +K++ + V + + + +
Sbjct: 61 TANHFEIVIHAQNLGILIGTKSEKLKLFQKQIKEFIFHYRQSEWNSKLKVVLHIFRCKTS 120
Query: 113 ATLIAQSIAQQLERRVVFRRAMK---RAVQSAMRF---------GADGVKVIASG 155
A+ IA I + LERRV ++ A + +Q R G G+K+ SG
Sbjct: 121 ASSIADFIEEHLERRVPYKVAFNLLQKHLQRQERQEHFIXDSALGILGMKIQISG 175
>gi|288191241|gb|ADC43973.1| ribosomal protein S3 [Abatia parviflora]
Length = 492
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 54/178 (30%), Positives = 84/178 (47%), Gaps = 6/178 (3%)
Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90
LL +D K+ E L+ G LI+ II+ R +++K+R
Sbjct: 310 DLLGKD-KVME-LREKFINLGGIGELIKGIEMMIEIILRKRRIPYRDNSYLNEMKKMRSL 367
Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRA---VQSAMRFGA 146
LSN T + + ++ +A+LIAQ I+ QL +R FR + ++ M
Sbjct: 368 LSNRTATNTLIESVKIQSVYQSASLIAQDISFQLRNKRRSFRSIFSKIVKDIEFLMNKWV 427
Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
+G+++ SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 428 EGIRICCSGRLKGAEIARTECSKYGKTSCNVFNQKIDYAPAEVSTRYGISGVKVWISY 485
>gi|302748776|gb|ADL63868.1| ribosomal protein S3 [Hedycarya arborea]
Length = 483
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ ++R +++K+R LSN TN+
Sbjct: 314 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNSRIPYGYNSYLNEVKKMRSLLSNRTNT 372
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + +Q M G +G+++
Sbjct: 373 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIQLVMPKGVEGIRICC 432
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 433 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRISY 483
>gi|56181015|gb|AAV83622.1| ribosomal protein S3 [Halimeda lacunalis]
gi|56181018|gb|AAV83624.1| ribosomal protein S3 [Halimeda lacunalis]
Length = 168
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 49/169 (28%), Positives = 84/169 (49%), Gaps = 15/169 (8%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A + Y + ED IR L K+A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKTNYSKYVLEDNFIRTILSEKYKRAKFVKIQISRK 60
Query: 61 HKNC-RIIVYSARPGLIIGKK-----GTDIEKIRKKLSNMTNSEIHLSVN-----EVPKP 109
+N I++++ +P ++IGKK I + + K I + + +
Sbjct: 61 IENHLEIVIHAQKPDILIGKKIDSRESLKIFQKQIKKFIFQYRGIEWNSKLKVILYIFRC 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155
+ +A+ IA I + LE+RV ++ K+ +Q + A G+K++ SG
Sbjct: 121 KTSASSIADFIVEHLEKRVPYKVVFVLLKKHLQR-QKHSALGMKILISG 168
>gi|302748673|gb|ADL63817.1| ribosomal protein S3 [Croomia pauciflora]
Length = 456
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 5/170 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LS TN+
Sbjct: 288 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSFLSERTNT 346
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQ---SAMRFGADGVKVIA 153
+ ++ +A+LIAQ I+ Q FR + V+ M G +G+++
Sbjct: 347 NTLIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSKIVKDIPLIMPKGVEGIRICC 406
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 407 SGRLGGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGISGVKVWIS 456
>gi|288191265|gb|ADC43985.1| ribosomal protein S3 [Eucryphia milliganii]
Length = 512
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 6/172 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E + + GV ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 336 KVMELIDKFINLGGVGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 394
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLER-----RVVFRRAMKRAVQSAMRFGADGVKVI 152
+ ++ +A+ IAQ I+ QL R +F + +K + G +G+++
Sbjct: 395 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKEGLEGIRIC 454
Query: 153 ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 455 CSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 506
>gi|272716746|gb|ACZ95675.1| ribosomal protein S3 [Abies holophylla]
Length = 557
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 57/178 (32%), Positives = 84/178 (47%), Gaps = 7/178 (3%)
Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90
LL ++ IR L L G L+ II+ + R ++ K+R
Sbjct: 382 NLLGKEKVIR--LVEKLISLGGIGGLMRGIGMMIEIILRNRRIPYGYNYYLNEVRKMRSL 439
Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGA 146
LSN TN+ + ++ +A+LIAQ I+ QL R FR + V+ M G
Sbjct: 440 LSNRTNTNTLIGSVKILN-YQSASLIAQDISFQLRDRTRSFRSIFSQIVRDIPLVMPKGV 498
Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
G+++ SGRL GAE++RTEC G+ R IDY +A T YG G+KV++S
Sbjct: 499 RGIRICCSGRLKGAEIARTECREYGKTSCNAFRHKIDYASAKVSTRYGILGVKVWISF 556
Score = 58.9 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54
M +K+NPI RL +N + +S WF+ YG L+++D+ +R+Y + +
Sbjct: 1 MARKVNPISVRLNLNRSSDSSWFSDYY-YGKLVYQDVNLRDYFGSIRPPTRKTFGFRLGR 59
Query: 55 ILIERTHKNCRIIVY 69
+I + K I ++
Sbjct: 60 CIIHHSPKRTFIHLF 74
>gi|302748913|gb|ADL63936.1| ribosomal protein S3 [Ochna serrulata]
Length = 448
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ +K G+ ++ I + + + G +++K+R LSN T
Sbjct: 276 KVMELIEKFIKLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEMKKMRSLLSNRT 332
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ +AQ I+ QL ++ FR + V+ M+ G +G+++
Sbjct: 333 NTTTLIESVKIKSVYQSASPLAQDISFQLRNKKRSFRSIFSKIVKDIPLVMKKGVEGIRI 392
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY TA T YG GIKV++S
Sbjct: 393 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYATAEVATRYGISGIKVWISY 445
>gi|225556722|gb|EEH05010.1| 40S ribosomal protein S3 [Ajellomyces capsulatus G186AR]
Length = 271
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 43/202 (21%), Positives = 81/202 (40%), Gaps = 13/202 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ Q L + G + + + T II+ + ++G++G
Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V ++A +S+ +L + RRA ++
Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q +R ID T G GI
Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQGVLGI 187
Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220
KV + + +
Sbjct: 188 KVKIMRGSDPEGKSGPQKSLPD 209
>gi|302748993|gb|ADL63976.1| ribosomal protein S3 [Rhabdodendron amazonicum]
Length = 475
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 45/169 (26%), Positives = 82/169 (48%), Gaps = 5/169 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ + ++ + G+ + LI+ II+ R +++K+R LSN T +
Sbjct: 307 KVMKLIEKFIDLGGI-RELIKGIEMMIEIILKKRRIPYGYNSYLNEVKKMRSLLSNRTKT 365
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLER-RVVFRRA---MKRAVQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q ++ R FR + + + M+ G +G+++
Sbjct: 366 NTLIESVKIKSVYQSASPIAQDISFQPKKKRRSFRSIYSQIVKDIPLVMKKGVEGIRICC 425
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202
SGR GAE++RTEC + IDY +A T YG G+KV++
Sbjct: 426 SGRSEGAEIARTECGKYRKTSCNVFDQKIDYASAEVSTRYGILGVKVWI 474
>gi|288191281|gb|ADC43993.1| ribosomal protein S3 [Tripterygium regelii]
Length = 501
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + +++K+R LSN T +
Sbjct: 326 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRKRKIPYGYNFYLNEVKKMRSLLSNRTKT 384
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M G +G+++
Sbjct: 385 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMTKGVEGIRICC 444
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 445 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 495
>gi|328541200|gb|AEB21824.1| ribosomal protein S3 [Kurzia calcarata]
Length = 375
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ + K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLRKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFR 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TEC G L IDY A T YG G+
Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTECKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369
Query: 199 KVYVSL 204
KV+VS
Sbjct: 370 KVWVSY 375
>gi|272716751|gb|ACZ95678.1| ribosomal protein S3 [Picea smithiana]
Length = 569
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 48/148 (32%), Positives = 72/148 (48%), Gaps = 7/148 (4%)
Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + + G ++ K+R LSN TN+ + ++ +A+LIAQ I
Sbjct: 422 GMIIEIILKNRRIPYGYNYYLNEVRKMRSLLSNRTNTNTLIGSVKILN-YQSASLIAQDI 480
Query: 121 AQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
+ QL R FR + V+ M G G+++ SGRL GAE++RTEC G+
Sbjct: 481 SFQLRDRTRSFRSIFSQIVRDIPLVMPKGVRGIRICCSGRLKGAEIARTECREYGKTSCN 540
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSL 204
R IDY +A T YG G+KV++S
Sbjct: 541 VFRHKIDYASAKVSTRYGILGVKVWISF 568
Score = 60.4 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54
M +K+NPI RL +N + +S WF+ YG L+++D+ +R+Y + +
Sbjct: 1 MARKVNPISVRLNLNRSSDSSWFSDYY-YGKLVYQDVNLRDYFGSIRPPTRKTFGFRLGR 59
Query: 55 ILIERTHKNCRIIVYSARPGLIIGKK 80
+I K I ++ R + K
Sbjct: 60 CIIHHFPKRTFIHLFLPRRPRRLKYK 85
>gi|224365643|ref|YP_002608370.1| ribosomal protein S3 [Vitis vinifera]
gi|209954167|emb|CAQ77614.1| ribosomal protein S3 [Vitis vinifera]
gi|239764764|gb|ACS15233.1| ribosomal protein S3 [Vitis vinifera]
Length = 563
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E + + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 379 KVMELIDKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 437
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++
Sbjct: 438 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 497
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 498 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 548
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/101 (22%), Positives = 41/101 (40%), Gaps = 9/101 (8%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54
M +K NPI RL +N + +S WF+ YG +++D+ +R Y + +
Sbjct: 1 MARKGNPISVRLDLNRSSDSSWFSDYY-YGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGR 59
Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95
+I K R ++ P G K + + K+
Sbjct: 60 CIILHFPK--RTFIHFFLPRRPRGLKRREKSRPGKEKGRWW 98
>gi|288191283|gb|ADC43994.1| ribosomal protein S3 [Lepidobotrys staudtii]
Length = 284
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 84/171 (49%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 109 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSLLSNRTNT 167
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + + + M+ G +G+++
Sbjct: 168 NTLMESVKIKSVYQSASPIAQDISFQLRNKTRSFRSILSNIVKDIPLVMKKGVEGIRICC 227
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 228 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 278
>gi|14520552|ref|NP_126027.1| 30S ribosomal protein S3P [Pyrococcus abyssi GE5]
gi|17367830|sp|Q9V1U1|RS3_PYRAB RecName: Full=30S ribosomal protein S3P
gi|5457768|emb|CAB49258.1| rps3P SSU ribosomal protein S3P [Pyrococcus abyssi GE5]
Length = 210
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 59/194 (30%), Positives = 101/194 (52%), Gaps = 13/194 (6%)
Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-S 97
I E+L+ L++AG + I++T ++I+++A PG +IG+ G I ++ + L
Sbjct: 17 IDEFLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIRELTRILERQFGLE 76
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ V E+ P +NA + A IAQ LER + FRRA A+++ M GA GV++ SG+L
Sbjct: 77 NPQIDVQEIKNPYLNAKVQAVRIAQALERGIHFRRAAYAAMRAIMSNGARGVEIRISGKL 136
Query: 158 NGAELSRTECYLEGRV-----PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
G E +++ + +G + P +TL + G A A G G+KV + D +
Sbjct: 137 TG-ERAKSVRFYQGYLAKVGNPAETLVSK---GYAQALLKLGVIGVKVAIMPPDARLPDE 192
Query: 213 STIPAAEHRVVEKD 226
I + VE++
Sbjct: 193 IEI---IEKPVEEE 203
>gi|302748937|gb|ADL63948.1| ribosomal protein S3 [Pennantia corymbosa]
Length = 483
Score = 103 bits (258), Expect = 2e-20, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K++ LSN TN+
Sbjct: 310 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMQSLLSNRTNT 368
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++
Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 428
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 429 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 479
>gi|288191203|gb|ADC43954.1| ribosomal protein S3 [Elvasia calophyllea]
Length = 450
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 49/173 (28%), Positives = 85/173 (49%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ +K G+ ++ I + + + G +++K+R LSN T
Sbjct: 278 KVMELIEKFIKLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEMKKMRSLLSNRT 334
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ +AQ I+ QL ++ FR + V+ M+ G +G+++
Sbjct: 335 NTTTLIESVKIKSVYQSASPLAQDISFQLRNKKRSFRSIFSKIVKDIPLVMKKGVEGIRI 394
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY TA T YG GIKV++S
Sbjct: 395 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYATAEVATRYGISGIKVWISY 447
>gi|130076592|gb|ABO31954.1| ribosomal protein S3 [Ribes sp. Qiu 95022]
Length = 321
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E + + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 145 KVMELIDKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 203
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSAMRFGAD---GVKVIA 153
+ ++ +A+ IAQ I+ Q +R FR + V+ G+++
Sbjct: 204 NTLIESVKIKSVYQSASPIAQDISFQPRNKRRSFRSIFSKIVKDIPLVMKKEVEGIRICC 263
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 264 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 314
>gi|302749105|gb|ADL64032.1| ribosomal protein S3 [Tropaeolum peltophorum]
Length = 490
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 44/173 (25%), Positives = 77/173 (44%), Gaps = 6/173 (3%)
Query: 45 CHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLS 102
++ + +I I + + G +++K+R LSN N+ +
Sbjct: 312 KVMEDKLINRIEELIKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRKNTNTLIE 371
Query: 103 VNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIASGRLN 158
++ +A+ IAQ I+ QL + FR + + + M+ G +G+++ SGRL
Sbjct: 372 SVKIKSVYQSASPIAQDISFQLRNKTRSFRSILSQIVKDIPLVMKKGVEGIRICCSGRLE 431
Query: 159 GAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
GAE++RTEC G+ IDY A T YG G+KV++S +
Sbjct: 432 GAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWISYSKKKGGR 484
>gi|288191213|gb|ADC43959.1| ribosomal protein S3 [Panda oleosa]
Length = 498
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 49/169 (28%), Positives = 83/169 (49%), Gaps = 5/169 (2%)
Query: 40 REYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEI 99
E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 328 MELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNTNT 386
Query: 100 HLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASG 155
+ ++ +A+LIAQ I+ QL + FR + V+ M+ G +G+++ SG
Sbjct: 387 LIESVKIQSVYQSASLIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICCSG 446
Query: 156 RLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
R GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 447 RSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 495
>gi|209879906|ref|XP_002141393.1| 40S ribosomal protein S3 [Cryptosporidium muris RN66]
gi|209556999|gb|EEA07044.1| 40S ribosomal protein S3, putative [Cryptosporidium muris RN66]
Length = 221
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 46/194 (23%), Positives = 84/194 (43%), Gaps = 10/194 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L C L + G A + + T II+ + R ++G KG I ++ + N
Sbjct: 24 EFLSCTLAEDGYAGVEVRVTPIRTEIIIRATRTREVLGVKGRRIRELTSLVQKRFNFPAG 83
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L + + A A+S+ +L + V RRA ++ M GA G +VI SG+L
Sbjct: 84 SVELFAERIENRGLCAMAQAESLRYKLLKGVAVRRACYGVLRHVMESGAKGCEVIVSGKL 143
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
A+ +++ + +G + Q R ++D G G++V + L +V S
Sbjct: 144 R-AQRAKSMKFRDGYMIATGQPFRDYVDKAVRNVLMKQGVLGVQVKIMLPYDPEGKVGPS 202
Query: 212 DSTIPAAEHRVVEK 225
+ A R ++
Sbjct: 203 NPLPDAIMVREPKE 216
>gi|325183864|emb|CCA18322.1| 40S ribosomal protein S33 putative [Albugo laibachii Nc14]
gi|325183947|emb|CCA18405.1| 40S ribosomal protein S33 putative [Albugo laibachii Nc14]
Length = 246
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 47/206 (22%), Positives = 80/206 (38%), Gaps = 18/206 (8%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E LQ L G + + + T II+ + R ++G+KG
Sbjct: 13 ADGVFYAEL-------NELLQRELYGDGYSGVEVRVTPLRTEIIIRATRTQEVLGEKGQR 65
Query: 84 IEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ + N + L + + + A+S+ +L + RRA ++
Sbjct: 66 IRELTSVVQKRFNFAEGSVELYAERIANRGLCSQAQAESLKYRLLEGLAVRRACYSVLRF 125
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGR-VPLQTLRAH-IDYGTAVAETAYGSCGI 198
M GA G +VI SG+L A+ +++ + EG V R +D G G+
Sbjct: 126 VMEAGAKGCEVIVSGKLR-AQRAKSMKFKEGYMVKTGNARQEYVDTAVRHVLMRQGVLGV 184
Query: 199 KVYVSLRDEVSDSDSTIPAAEHRVVE 224
KV + D T R ++
Sbjct: 185 KVSIM-----LPHDPTGKQGPKRNLD 205
>gi|146302882|ref|YP_001190198.1| 30S ribosomal protein S3P [Metallosphaera sedula DSM 5348]
gi|172046893|sp|A4YCX2|RS3_METS5 RecName: Full=30S ribosomal protein S3P
gi|145701132|gb|ABP94274.1| SSU ribosomal protein S3P [Metallosphaera sedula DSM 5348]
Length = 240
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 52/172 (30%), Positives = 86/172 (50%), Gaps = 4/172 (2%)
Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN 96
+ + E+L A A I +T R+ +Y+ RP +IIGK G I+++ + L N
Sbjct: 16 VMVDEFLAKEYYNAEYAGSEISKTPMGTRVTIYAGRPAIIIGKDGKTIKRLAQILEKYFN 75
Query: 97 -SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155
++V + KPE+NA ++A +A LE+ FRRA ++ M GA G +VI SG
Sbjct: 76 LENPQITVTQPEKPELNARVMAFRLAVTLEKGYHFRRAAFMTIRRIMNAGALGAEVIVSG 135
Query: 156 RLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
++ +E ++ E EG V L +D A+A G G++V ++
Sbjct: 136 KIT-SERAKFEKLKEGIVYKTGNNLDVMVDRAIAIATLKMGIYGVEVVITKP 186
>gi|272716711|gb|ACZ95657.1| ribosomal protein S3 [Tsuga dumosa]
Length = 558
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 47/148 (31%), Positives = 72/148 (48%), Gaps = 7/148 (4%)
Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + + G +++K+R L N TN+ + ++ +A+LIAQ I
Sbjct: 411 GMMIEILLRNRRIPYGYNYYLNEVQKMRSLLFNRTNTNTLIGSVKILN-YQSASLIAQDI 469
Query: 121 AQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
+ QL R FR + V+ M G G+++ SGRL GAE++RTEC G+
Sbjct: 470 SFQLRDRTRSFRSIFSQIVRDIPLVMPKGVRGIRICCSGRLKGAEIARTECREYGKTSCN 529
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSL 204
R IDY +A T YG G+KV++S
Sbjct: 530 VFRHKIDYASAKVSTRYGILGVKVWISF 557
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 38/75 (50%), Gaps = 7/75 (9%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54
M +K+NPI RL +N + +S WF+ YG L+++D+ +R+Y + + +
Sbjct: 1 MARKVNPISVRLNLNRSSDSSWFSDYY-YGKLVYQDVNLRDYFGSIRPPTRNTFGFRLGR 59
Query: 55 ILIERTHKNCRIIVY 69
+I K I ++
Sbjct: 60 CIIHHFPKRTFIHLF 74
>gi|302748691|gb|ADL63826.1| ribosomal protein S3 [Datisca cannabina]
Length = 499
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E+++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 325 KVIEWIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 383
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 384 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 443
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 444 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 494
>gi|296423595|ref|XP_002841339.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637576|emb|CAZ85530.1| unnamed protein product [Tuber melanosporum]
Length = 360
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 42/202 (20%), Positives = 78/202 (38%), Gaps = 13/202 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ L + G + + + T II+ + ++G++G
Sbjct: 96 ADGVFYAEL-------NEFFTRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 148
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V + A +S+ +L + RRA ++
Sbjct: 149 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLCAVAQCESLRYKLLNGLAVRRACYGVLRF 208
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q R ID T G GI
Sbjct: 209 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPARDFIDSATRHVLLRQGVLGI 267
Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220
KV + + +
Sbjct: 268 KVKIMRGSDPDGKSGPQKSLPD 289
>gi|302748519|gb|ADL63740.1| ribosomal protein S3 [Aextoxicon punctatum]
Length = 489
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ I + G+ G +++K+R LSN T
Sbjct: 308 KVMELIEKFIDLGGIGEL---IKGIEMMIEIILRNRGIPYGYNSYLNEVKKMRSLLSNRT 364
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++
Sbjct: 365 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIPLVMKKGVEGIRI 424
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 425 CCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 477
>gi|223928063|gb|ACN23694.1| ribosomal protein S3 [Halimeda tuna]
Length = 165
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 47/166 (28%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L K+A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKRHYSKYVLEDNFVRTILSEKYKRAKFEKIQISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN--MTNSEIHLSVN-----EVPKPEIN 112
+ I++ + +P ++IGKK ++E +K++ +I + + + +
Sbjct: 61 IEDHLEIVIXAQQPDILIGKKSENLEVFQKQIKKFIFQYRQIEWNSKLKVILYIFRCKNT 120
Query: 113 ATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155
A+ IA I + LE+RV ++ K+ +Q + A G+KV +G
Sbjct: 121 ASSIADFIVEHLEKRVPYKVIFVLLKKHLQR-QKHSALGMKVQIAG 165
>gi|58258267|ref|XP_566546.1| ribosomal protein S3 [Cryptococcus neoformans var. neoformans
JEC21]
gi|134106179|ref|XP_778100.1| hypothetical protein CNBA1030 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|321251025|ref|XP_003191933.1| ribosomal protein S3 [Cryptococcus gattii WM276]
gi|50260803|gb|EAL23453.1| hypothetical protein CNBA1030 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57222683|gb|AAW40727.1| ribosomal protein S3, putative [Cryptococcus neoformans var.
neoformans JEC21]
gi|317458401|gb|ADV20146.1| Ribosomal protein S3, putative [Cryptococcus gattii WM276]
Length = 252
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 43/185 (23%), Positives = 77/185 (41%), Gaps = 6/185 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
++ L + G A + TH II+ + ++G KG I +++ +K +
Sbjct: 25 DFFTRELAEEGYAGCEVRVTHARTEIIIRATHTQEVLGDKGRRIRELKALIEKRFKFPEN 84
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V ++AT A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 85 ALELYAEKVQYRGLSATAQAESLRYKLLGGLAMRRACYGVLRFVMESGAKGCEVVVSGKL 144
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
A +++ + EG + Q R IDY G GIKV + + +
Sbjct: 145 RAA-RAKSMKFTEGFMVHSGQPARDFIDYAVRHVLLRQGVLGIKVKIMKPSDPAGRQGPA 203
Query: 216 PAAEH 220
Sbjct: 204 KNLPD 208
>gi|56180907|gb|AAV83550.1| ribosomal protein S3 [Halimeda cuneata]
Length = 160
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 5/160 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ + S W+A +Y + ED +R L +A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPYLSNWYASKKDYSKYVLEDHLVRTLLFKKYNRAKFDKITIFRN 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINA----TL 115
+ I +Y+ +P +++G G + + K S + + + + + +
Sbjct: 61 IEDHIEIFIYAQKPEILLGTTGARQLQKQIKTSIFQHRKRNSKLKVILSIFCCKINASSA 120
Query: 116 IAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155
IA I + LERR+ ++ + + R G+KV SG
Sbjct: 121 IADFIVEHLERRIPYKVVLTLLKKYLKRNKPLGMKVKISG 160
>gi|315229862|ref|YP_004070298.1| 30S ribosomal protein S3e (S3p) [Thermococcus barophilus MP]
gi|315182890|gb|ADT83075.1| SSU ribosomal protein S3e (S3p) [Thermococcus barophilus MP]
Length = 207
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 59/194 (30%), Positives = 102/194 (52%), Gaps = 13/194 (6%)
Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-S 97
I EYL+ L++AG + I++T ++I+++A PG +IG+ G I ++ + L
Sbjct: 17 IDEYLEKELRRAGYGGLDIKKTPLGTKVIIFAANPGYVIGRGGRRIRELTRILERQFGLE 76
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ V E+ P +NA + A +AQ LER V FRRA A+++ MR GA GV++ SG+L
Sbjct: 77 NPQIEVEEIKNPYLNAKVQAVRLAQALERGVHFRRAAYAAIRAIMRNGARGVEIRLSGKL 136
Query: 158 NGAELSRTECYLEGRV-----PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
G E +++ + +G + P +TL + G A A G G+KV + + +
Sbjct: 137 TG-ERAKSIRFYQGYLAKVGNPAETLVSK---GYAQALLKLGVIGVKVAIMPPEARLPDE 192
Query: 213 STIPAAEHRVVEKD 226
I + +E++
Sbjct: 193 IEI---IEKPLEEE 203
>gi|302748848|gb|ADL63904.1| ribosomal protein S3 [Linnaea borealis]
Length = 485
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E + + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 311 KVMELIDKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 369
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + + FR + V+ M+ G +G+++
Sbjct: 370 NTLIESVKIKSVYQSASPIAQDISFQPKNKTRSFRSIFSQIVKDIPLVMKKGVEGIRICC 429
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 430 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 480
>gi|223927416|gb|ACN23333.1| ribosomal protein S3 [Halimeda minima]
Length = 155
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 15/149 (10%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYVLEDNFLRTILPKKYNKAGFEKIKISRK 60
Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPKPEINATL- 115
+ I++ + +P ++IGKKG ++E +K++ + TN KP+ L
Sbjct: 61 IEGHIEIVINAQKPEILIGKKGENLEAFQKEIKKLLSTTNRASDSECEATAKPQNKVILY 120
Query: 116 ----------IAQSIAQQLERRVVFRRAM 134
IA + + LE+RV ++
Sbjct: 121 VIRCKNNASSIADFLIENLEKRVPYKHVF 149
>gi|189188112|ref|XP_001930395.1| 40S ribosomal protein S3-2 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|330936377|ref|XP_003305367.1| hypothetical protein PTT_18182 [Pyrenophora teres f. teres 0-1]
gi|187972001|gb|EDU39500.1| 40S ribosomal protein S3-2 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|311317666|gb|EFQ86553.1| hypothetical protein PTT_18182 [Pyrenophora teres f. teres 0-1]
Length = 266
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 42/202 (20%), Positives = 81/202 (40%), Gaps = 13/202 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ Q L + G + + + T II+ + ++G++G
Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V ++A +S+ +L + RRA ++
Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q + ID+ T G GI
Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGVLGI 187
Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220
KV + + +
Sbjct: 188 KVKIMRGSDPEGKAGPSKSLPD 209
>gi|130076590|gb|ABO31953.1| ribosomal protein S3 [Rhodoleia championii]
Length = 480
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E + + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 305 KVIELIDKFINPGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNA 363
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q +R FR + V++ M+ G G+++
Sbjct: 364 NTLIESVKIKSVYQSASTIAQDISFQPRNKRRSFRSIFSKIVKNIPLVMKKGVGGIRICC 423
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 424 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 474
>gi|302748575|gb|ADL63768.1| ribosomal protein S3 [Begonia sp. Qiu 05009]
Length = 518
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ + I + G+ G +++K+R LSN T
Sbjct: 345 KVIELIEKFIDLGGIGDLFKGI---EMMIEIILKNRGIPYGYNSYLNEVQKMRSLLSNKT 401
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKV 151
N+ + ++ +A+ IAQ I+ QL + FR + + + M+ G +G+++
Sbjct: 402 NTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSILSQIVKDIPLVMKKGVEGIRI 461
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 462 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 514
>gi|288191279|gb|ADC43992.1| ribosomal protein S3 [Siphonodon celastrineus]
Length = 506
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 45/172 (26%), Positives = 80/172 (46%), Gaps = 6/172 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + +++K+R L N T +
Sbjct: 330 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRKIKIPYGYNFYLNEVKKMRSLLYNRTKT 388
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSAM----RFGADGVKVI 152
+ ++ +A+ IAQ I+ QL + FR + V+ + G +G+++
Sbjct: 389 NTLIESVKIKSVYQSASPIAQDISFQLRNKTREFRSIFSQIVKDIPLVMKKKGVEGIRIC 448
Query: 153 ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 449 CSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 500
>gi|170095049|ref|XP_001878745.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646049|gb|EDR10295.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 262
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 39/170 (22%), Positives = 73/170 (42%), Gaps = 6/170 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E+ L + G + + TH II+ + ++G+KG I ++ +K +
Sbjct: 23 EFFTRELAEEGYSGCDVRVTHARTEIIIRATHTQEVLGEKGRRIRELTALVQKRFKFPEN 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V ++A +S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
A +++ + +G + Q R +DY G GIKV +
Sbjct: 143 RAA-RAKSMKFTDGFMIHSGQPARDFVDYAVRHVLLRQGVLGIKVKIMKG 191
>gi|272716717|gb|ACZ95660.1| ribosomal protein S3 [Keteleeria fortunei]
Length = 556
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 48/148 (32%), Positives = 72/148 (48%), Gaps = 7/148 (4%)
Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + + G ++ K+R LSN TN+ + ++ +A+LIAQ I
Sbjct: 409 GMMIEIILRNRRIPYGYNYYLNEVRKMRSLLSNRTNTNTLIGSVKILN-YQSASLIAQDI 467
Query: 121 AQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
+ QL R FR + V+ M G G+++ SGRL GAE++RTEC G+
Sbjct: 468 SFQLRDRTRSFRSIFSQIVRDIPLVMPKGVRGIRICCSGRLKGAEIARTECREYGKTSCN 527
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSL 204
R IDY +A T YG G+KV++S
Sbjct: 528 VFRHKIDYASAKVSTRYGILGVKVWISF 555
Score = 58.1 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54
M +K+NPI RL +N + +S WF+ YG L+++D+ +R+Y + +
Sbjct: 1 MARKVNPISVRLNLNRSSDSSWFSDYY-YGKLVYQDVNLRDYFGSIRPPTRKTFGFRLGR 59
Query: 55 ILIERTHKNCRIIVY 69
+I K I ++
Sbjct: 60 CIIHHFPKRTFIHLF 74
>gi|417728|sp|Q04716|RT03_PETHY RecName: Full=Ribosomal protein S3, mitochondrial
gi|14163|emb|CAA47420.1| S3 [Petunia x hybrida]
Length = 562
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I II+ + R +++K+R L N TN+
Sbjct: 378 KVMELIEKFIDLNRIGEL-IRGIEMMIEIILRNRRIPYGYNYYLNEVKKMRSLLYNRTNT 436
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++
Sbjct: 437 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 496
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 497 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 547
Score = 46.1 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 40/100 (40%), Gaps = 10/100 (10%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54
M +K NPI RL +N + +S WF+ YG +++D+ +R Y + +
Sbjct: 1 MARKGNPISVRLDLNRSSDSSWFS--YYYGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGR 58
Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM 94
+I K R ++ P K + + K+
Sbjct: 59 CIILHFPK--RTFIHFFLPRRPRRLKRREKSRPVKEKGRW 96
>gi|302748840|gb|ADL63900.1| ribosomal protein S3 [Leea guineensis]
Length = 481
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + + +++K+R LSN TN+
Sbjct: 308 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRKIPYGYNSYLNEVKKMRSLLSNRTNT 366
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++
Sbjct: 367 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 426
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 427 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 477
>gi|302748607|gb|ADL63784.1| ribosomal protein S3 [Calycanthus floridus]
Length = 483
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++KIR LSN TN+
Sbjct: 314 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVQKIRSLLSNRTNT 372
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+LIAQ I+ Q + FR + V+ M G +G+++
Sbjct: 373 NTLIESVKIKSVYQSASLIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMPKGVEGIRICC 432
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 433 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRISY 483
>gi|272716723|gb|ACZ95663.1| ribosomal protein S3 [Cathaya argyrophylla]
Length = 557
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 48/148 (32%), Positives = 72/148 (48%), Gaps = 7/148 (4%)
Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + + G ++ K+R LSN TN+ + ++ +A+LIAQ I
Sbjct: 410 GMMIEIILKNRRIPYGYNYYLNEVRKMRSLLSNRTNTNTLIGSVKILN-YQSASLIAQDI 468
Query: 121 AQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
+ QL R FR + V+ M G G+++ SGRL GAE++RTEC G+
Sbjct: 469 SFQLRDRTRSFRSIFSQIVRDIPLVMPKGVRGIRICCSGRLKGAEIARTECREYGKTSCN 528
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSL 204
R IDY +A T YG G+KV++S
Sbjct: 529 VFRHKIDYASAKVSTRYGILGVKVWISF 556
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54
M +K+NPI RL +N + +S WF+ YG L+++D+ +R+Y + +
Sbjct: 1 MARKVNPISVRLHLNRSSDSSWFSDYY-YGKLVYQDVNLRDYFGSIRPPTRKTFGFRLGR 59
Query: 55 ILIERTHKNCRIIVY 69
+I K I ++
Sbjct: 60 CIIHHFPKRTFIHLF 74
>gi|288191253|gb|ADC43979.1| ribosomal protein S3 [Tricliceras longipedunculatum]
Length = 503
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 53/166 (31%), Positives = 80/166 (48%), Gaps = 4/166 (2%)
Query: 43 LQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLS 102
L L+ G LI+ II+ + R ++ K+R LSN TN+ +
Sbjct: 332 LIEKLRNLGRIGELIKGIEMMIEIILRNRRIPYGYNSYLNEMTKMRSLLSNRTNTNTLIE 391
Query: 103 VNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGRLN 158
++ +A+LIAQ I+ QL + FR + V+ M+ G G+++ SGRL
Sbjct: 392 SVKIQSVYQSASLIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVGGIRICCSGRLE 451
Query: 159 GAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
GAE++RTEC G+ L IDY A T YG G+KV++S
Sbjct: 452 GAEIARTECGKYGKTSRNVLYQKIDYAPAEVSTRYGILGVKVWISY 497
>gi|57013937|ref|YP_173410.1| ribosomal protein S3 [Nicotiana tabacum]
Length = 563
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I II+ + R +++K+R L N TN+
Sbjct: 379 KVMELIEKFIDLNRIGEL-IRGIEMMIEIILRNRRIPYGYNYYLNEVKKMRSLLYNRTNT 437
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++
Sbjct: 438 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 497
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 498 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 548
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 22/100 (22%), Positives = 40/100 (40%), Gaps = 9/100 (9%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54
M +K NPI RL +N + +S WF+ YG +++D+ +R Y + +
Sbjct: 1 MARKGNPISVRLDLNRSSDSSWFSDYY-YGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGR 59
Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM 94
+I K R ++ P K + + K+
Sbjct: 60 CIIIHFPK--RTFIHFFLPRRPRRLKRREKSRPVKEKGRW 97
>gi|19113555|ref|NP_596763.1| 40S ribosomal protein S3 [Schizosaccharomyces pombe 972h-]
gi|6094179|sp|O60128|RS3_SCHPO RecName: Full=40S ribosomal protein S3
gi|3133108|emb|CAA19033.1| 40S ribosomal protein S3 [Schizosaccharomyces pombe]
gi|110082655|dbj|BAE97279.1| ribosomal protein s3 [Schizosaccharomyces pombe]
Length = 249
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 43/199 (21%), Positives = 80/199 (40%), Gaps = 13/199 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ L + G + + T II+ + ++G+KG
Sbjct: 15 ADGVFYAEL-------NEFFTRELSEEGYSGCEVRVTPSRSEIIIRATHTQDVLGEKGRR 67
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V + A +S+ +L + RRA ++
Sbjct: 68 IRELTALVQKRFKFAENTVELYAEKVQNRGLCAVAQCESLRYKLLAGLAVRRAAYGVLRY 127
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q ID T G G+
Sbjct: 128 VMEAGAKGCEVVISGKLRAA-RAKSMKFADGFMIHSGQPAVDFIDSATRHVLLRQGVLGV 186
Query: 199 KVYVSLRDEVSDSDSTIPA 217
KV + L + + ++P
Sbjct: 187 KVKIMLPEPKTRQKKSLPD 205
>gi|302748653|gb|ADL63807.1| ribosomal protein S3 [Clavija eggersiana]
Length = 476
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 47/173 (27%), Positives = 83/173 (47%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ I + + + G +++K+R LSN T
Sbjct: 303 KVMELIEKFIDLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEVKKMRSLLSNRT 359
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
N+ ++ ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++
Sbjct: 360 NTNTNIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRI 419
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 420 CCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 472
>gi|288191313|gb|ADC44009.1| ribosomal protein S3 [Daphniphyllum macropodum]
Length = 497
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 49/171 (28%), Positives = 84/171 (49%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 322 KVIELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 380
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q +R FR + V+ M+ G +G+++
Sbjct: 381 NTLIESVKIKSVYQSASTIAQDISFQPRNKRRSFRSIFSKIVKDIPLVMKKGVEGIRICC 440
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 441 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 491
>gi|322709405|gb|EFZ00981.1| cytoplasmic ribosomal protein subunit S3 [Metarhizium anisopliae
ARSEF 23]
Length = 257
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 42/202 (20%), Positives = 81/202 (40%), Gaps = 13/202 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ Q L + G + + + T II+ + + ++G++G
Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATQTQEVLGEQGRR 68
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V ++A +S+ +L + RRA ++
Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q + ID T G GI
Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKEFIDTATRHVLLRQGVLGI 187
Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220
KV + + +
Sbjct: 188 KVKIMRGSDPDGKAGPSKSLPD 209
>gi|223927717|gb|ACN23466.1| ribosomal protein S3 [Halimeda cuneata]
Length = 166
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 11/166 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FR+G+ S W+A Y + ED +R L +A KI I R
Sbjct: 1 MGQKVHPLGFRVGITQPXLSHWYASKKYYSKYVLEDHFVRTVLSEKYTRARFEKIQISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEI 111
+ I++++ +P ++IGKKG +++ +K++ NS++ + +
Sbjct: 61 IEDHLEIVIHAQKPDILIGKKGENLKIFQKQIKTFIFQYRQIEWNSKLKVILYIYRCKTS 120
Query: 112 NATLIAQSIAQQLERRVVFRRAM--KRAVQSAMRFGADGVKVIASG 155
++ IA I + LERR+ ++ + + G+K+ SG
Sbjct: 121 ASSAIADFIVEHLERRIPYKVVFTLLKKHLKRKKQSTLGMKIQISG 166
>gi|295154348|gb|ADF83083.1| ribosomal protein S3 [Tuctoria fragilis]
Length = 128
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 47/128 (36%), Positives = 76/128 (59%), Gaps = 1/128 (0%)
Query: 67 IVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLE 125
I++ P L+ K ++EK +K N N +++++ +V +P ++A+ IA QL+
Sbjct: 1 IIHIGFPNLLKKKGAIEELEKDIQKKVNSVNQRLNIAIEKVKEPYREPNILAEYIAFQLK 60
Query: 126 RRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYG 185
RV FR+AMK+A++ + GVK+ +GRL G E++R E +GR+PLQT+RA IDY
Sbjct: 61 NRVSFRKAMKKAIELTKKADIKGVKIKIAGRLGGKEIARAESIKKGRLPLQTIRAKIDYC 120
Query: 186 TAVAETAY 193
T Y
Sbjct: 121 CYPIRTIY 128
>gi|145932456|ref|YP_001165368.1| ribosomal protein S3 [Phytophthora ramorum]
gi|110169654|gb|ABG54119.1| ribosomal protein S3 [Phytophthora ramorum]
Length = 271
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 56/250 (22%), Positives = 97/250 (38%), Gaps = 46/250 (18%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--HLKQAGVAKILIE 58
MGQKI PI RL WNS+W +EY LLH DL+I++Y + + K + I I
Sbjct: 1 MGQKIIPISLRLNKKKNWNSKWIVNNNEYSNLLHFDLEIKKYFENIFNYKNLKLIDINII 60
Query: 59 RTHKNCRIIVYSARPGLIIGK--------------KGTDIEKIRKKLSNMTNSEIHLSVN 104
+T KN + VY + +I+ K ++ ++
Sbjct: 61 KTSKNINVYVYIQKNAKKYYNLSYNKIINHLNLYYPNNNIKLFIKNTQFFEFLKLRKNLK 120
Query: 105 EVPK-----------------------PEINATLIAQSIAQQLERRVVFRRAMKRAVQSA 141
++ N +I I Q LER+ ++ + + +
Sbjct: 121 QIFDKIKKNNKINKNVKKMIYNFSYAFYTKNINIITFYIKQTLERKKTHKKFINN-IDNM 179
Query: 142 MRFGAD------GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGS 195
++ G ++ GRLN ++ + + +G++PL TL I Y +T G
Sbjct: 180 LQEFFKMFSNFIGYRLQFKGRLNKSKRKKKMVFQKGKIPLNTLEYDIKYHFNEFKTPSGI 239
Query: 196 CGIKVYVSLR 205
C IK++ +
Sbjct: 240 CSIKLWFFFK 249
>gi|305662597|ref|YP_003858885.1| SSU ribosomal protein S3P [Ignisphaera aggregans DSM 17230]
gi|304377166|gb|ADM27005.1| SSU ribosomal protein S3P [Ignisphaera aggregans DSM 17230]
Length = 209
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 59/188 (31%), Positives = 96/188 (51%), Gaps = 6/188 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEI 99
EYL +AG A + + RT R+I+Y+ARPGLIIG++G + I+ + +
Sbjct: 20 EYLASKFWRAGYAGVDLIRTPLGTRVIIYAARPGLIIGRRGQTLRTIQLVIEKLFGIENP 79
Query: 100 HLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNG 159
++V E P++NA ++A +IA LER + FRRA A++ M GA G +++ SG+L
Sbjct: 80 QITVVEAENPDLNARIVAFNIALALERGIHFRRAGFIALRRVMAAGAIGCEIVISGKLV- 138
Query: 160 AELSRTECYLEGRVPL---QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
AE +R E G+V Q+ R +D A G GI+V ++ +D +
Sbjct: 139 AERARYEKLKMGKVYKSGEQSFRL-VDRAVAHVLLKPGMYGIEVLITRPGLTADHVEIVQ 197
Query: 217 AAEHRVVE 224
+ +
Sbjct: 198 KEQEVSQQ 205
>gi|272716505|gb|ACZ95529.1| ribosomal protein S3 [Nageia formosensis]
Length = 616
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 50/196 (25%), Positives = 86/196 (43%), Gaps = 13/196 (6%)
Query: 22 WFARGSEYGALLHEDLKI-REYLQCHLKQAGVAKILIE-------RTHKNCRIIVYSARP 73
W ++ LL +I R++ ++ + + I + +
Sbjct: 420 WRSKKKILTYLLRRSKEILRKHFHTYIHKGSGSVKKIILGRIGGVMRGIEMMLEIRLRGA 479
Query: 74 GLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFR 131
G+ +G +++K+R LS TN+ + ++ +A+ IAQ I+ +L R FR
Sbjct: 480 GIPVGYNYYLNEVQKMRSLLSGRTNTNTFIGSVKIKSVYQSASPIAQDISFRLRDRKSFR 539
Query: 132 RAMK---RAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAV 188
R + M G+++ SGRL GAE++RTEC G+ R IDY +A
Sbjct: 540 SIFYEPVRDIPLVMLKRVGGIRICCSGRLKGAEIARTECMEYGKTSCNAFRHRIDYASAK 599
Query: 189 AETAYGSCGIKVYVSL 204
T YG G+KV++S
Sbjct: 600 VSTRYGILGVKVWISF 615
Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/93 (24%), Positives = 44/93 (47%), Gaps = 9/93 (9%)
Query: 3 QKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL-------QCHLKQAGVAKI 55
QK NPI RL +N + +S WF+ YG L+++D+ R+Y + + + +
Sbjct: 40 QKGNPISVRLHLNRSSDSSWFSDHY-YGKLVYQDVNPRDYFGSIRPPTRRNPFGFRLGRC 98
Query: 56 LIERTHKNCRIIVYSA-RPGLIIGKKGTDIEKI 87
++ + K+ I ++ RP L +G +
Sbjct: 99 ILHHSPKSTFIHLFLPRRPPLNSNSRGGQHGRS 131
>gi|212223217|ref|YP_002306453.1| 30S ribosomal protein S3P [Thermococcus onnurineus NA1]
gi|254764554|sp|B6YSL9|RS3_THEON RecName: Full=30S ribosomal protein S3P
gi|212008174|gb|ACJ15556.1| SSU ribosomal protein S3P; (rps3P) [Thermococcus onnurineus NA1]
Length = 208
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 63/196 (32%), Positives = 102/196 (52%), Gaps = 13/196 (6%)
Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-S 97
I EYL+ L++AG I I++T ++I+++A PG +IG+ G I ++ + L
Sbjct: 17 IDEYLEKELRRAGYGGIDIKKTPLGTKVIIFAANPGYVIGRGGRRIRELTRILERQFGLE 76
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ V E+ P +NA + A +AQ LER V FRRA A+++ MR GA GV++ SG+L
Sbjct: 77 NPQIEVEEIKNPYLNAKVQAVRLAQALERGVHFRRAAYAAIRAIMRNGARGVEIRISGKL 136
Query: 158 NGAELSRTECYLEGRV-----PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
G E +++ + +G + P +TL + G A A G G+KV + D +
Sbjct: 137 TG-ERAKSVRFYQGYLAKVGNPAETLVSK---GYAQALLKLGVIGVKVSIMPPDAKLPDE 192
Query: 213 STI---PAAEHRVVEK 225
+ P E V E+
Sbjct: 193 IEVIEKPIQEEEVSEE 208
>gi|302406170|ref|XP_003000921.1| 40S ribosomal protein S3 [Verticillium albo-atrum VaMs.102]
gi|261360179|gb|EEY22607.1| 40S ribosomal protein S3 [Verticillium albo-atrum VaMs.102]
Length = 262
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 44/214 (20%), Positives = 84/214 (39%), Gaps = 18/214 (8%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ Q L + G + + + T II+ + ++G++G
Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V ++A +S+ +L + RRA ++
Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q + ID+ T G GI
Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGVLGI 187
Query: 199 KVYVSLRDEVSDSDSTIPAAEH-----RVVEKDS 227
KV + + + E+ S
Sbjct: 188 KVKIMRGSDPEGKSGPQKSLPDAVTIIEPKEEQS 221
>gi|223927968|gb|ACN23631.1| ribosomal protein S3 [Halimeda discoidea]
Length = 158
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 41/151 (27%), Positives = 77/151 (50%), Gaps = 11/151 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L K+A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKRYYSKYVLEDHFVRTILSEKYKRAKFEKIHISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN-------MTNSEIHLSVNEVPKPEIN 112
+ I++++ +P ++IGKK ++ +K++ + + + + + +I+
Sbjct: 61 IEDHLEIVIHAQKPDILIGKKSETLKSFQKQIKKYIFQYRQIEWNSKLKVIVYIFRCKIH 120
Query: 113 ATLIAQSIAQQLERRVVFRRAM---KRAVQS 140
A+ IA I + LE+RV ++ K+ +Q
Sbjct: 121 ASSIADFIVEHLEKRVPYKVVFVLLKKHLQR 151
>gi|20094278|ref|NP_614125.1| 30S ribosomal protein S3P [Methanopyrus kandleri AV19]
gi|27734506|sp|Q8TX35|RS3_METKA RecName: Full=30S ribosomal protein S3P
gi|19887318|gb|AAM02055.1| Ribosomal protein S3 [Methanopyrus kandleri AV19]
Length = 227
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 54/180 (30%), Positives = 91/180 (50%), Gaps = 5/180 (2%)
Query: 49 QAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN--SEIHLSVNEV 106
+AG + ++R +II Y RP + IG++G +I ++ +++ + + V E+
Sbjct: 34 RAGYGGMRLQRVPNATKIIAYVERPAIAIGRRGRNIRRVEEEVQERFPLLGRVSIEVKEL 93
Query: 107 PKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTE 166
P PE+N ++A+ +A LER + FRRA A++ M GA G +I SG+L GA +RTE
Sbjct: 94 PSPELNPRVVARRLASALERGIHFRRAAYGALRRIMNAGAKGAMIILSGKLIGA-RARTE 152
Query: 167 CYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
++EG V + ++ G A T G+ G+ V + D + I E E
Sbjct: 153 KFMEGAVKYCGEPGDEYMIEGYVQAVTKPGAIGVTVRIMPPDVELPDELEIRPPEEVEDE 212
>gi|328541244|gb|AEB21846.1| ribosomal protein S3 [Zoopsis leitgebiana]
Length = 376
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 251 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 310
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TEC G L IDY A T YG G+
Sbjct: 311 QIKKCPYVKGIRIGCSGRLNGAEIAKTECKKYGETSLHVFSDQIDYAKTQASTPYGILGV 370
Query: 199 KVYVSL 204
KV+VS
Sbjct: 371 KVWVSY 376
>gi|302748629|gb|ADL63795.1| ribosomal protein S3 [Ceanothus sp. Qiu 96098]
Length = 509
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ I + + G +++K+R LSN
Sbjct: 327 KVMELIEKFIDLGGIGEL---IKGIEMMIEIILRNRIIPYGYNSYLNEVKKMRSLLSNRA 383
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQ---SAMRFGADGVKV 151
++ + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 384 HTNTLMESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLIMKKGVEGIRI 443
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 444 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 496
>gi|302749083|gb|ADL64021.1| ribosomal protein S3 [Tetracera asiatica]
Length = 471
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 6/185 (3%)
Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90
L+ +D I E ++ + G+ ++ I+ II+ + R +++K+R
Sbjct: 284 NLMDKDKVI-ELIKKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSL 341
Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGA 146
LSN TN+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G
Sbjct: 342 LSNRTNTNTLIESAKIKSVYQSASPIAQDISFQPRNKTRSFRSIFTKIVKDIPLVMKKGV 401
Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
G+++ SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 402 GGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWISYSK 461
Query: 207 EVSDS 211
+
Sbjct: 462 KKGGR 466
>gi|302748755|gb|ADL63858.1| ribosomal protein S3 [Gelsemium sp. Qiu 95096]
Length = 482
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 309 KVMELIEKFIDLGRIGEL-IKGIEIMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNKTNT 367
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+LIAQ I+ Q + FR + V+ M+ G +GV++
Sbjct: 368 NTLIESVKIKSVYQSASLIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGVRICC 427
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY +A T YG G+KV++S
Sbjct: 428 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYASAEVSTRYGISGVKVWISY 478
>gi|302748733|gb|ADL63847.1| ribosomal protein S3 [Euonymus sp. Qiu 94190]
Length = 507
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 45/180 (25%), Positives = 81/180 (45%), Gaps = 9/180 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ + I + + + G +++K+R LSN T
Sbjct: 325 KVMELIEKFINLGGIGEF---IKGIEMMIEIILRKRKIPYGYNFYLNEVKKMRSLLSNRT 381
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKV 151
+ + ++ +A+ IAQ I+ QL + FR + + + M+ G +G+++
Sbjct: 382 KTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSILSKIVKDIPLVMKKGVEGIRI 441
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
SGR GAE++RTEC G+ IDY A T YG G+KV++S +
Sbjct: 442 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISYSKKKGGR 501
>gi|288191315|gb|ADC44010.1| ribosomal protein S3 [Calycanthus floridus]
Length = 501
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 50/171 (29%), Positives = 82/171 (47%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++KIR LSN TN+
Sbjct: 326 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVQKIRSLLSNRTNT 384
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+LIAQ I+ Q + FR + V+ M G +G+++
Sbjct: 385 NTLIESVKIKSVYQSASLIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMPKGVEGIRICC 444
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 445 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRISY 495
>gi|145932366|ref|YP_001165415.1| ribosomal protein S3 [Phytophthora sojae]
gi|110169609|gb|ABG54075.1| ribosomal protein S3 [Phytophthora sojae]
Length = 276
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 57/250 (22%), Positives = 95/250 (38%), Gaps = 46/250 (18%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--HLKQAGVAKILIE 58
MGQKI PI RL WNS+W EY LLH DL+I++Y + + K + + I
Sbjct: 1 MGQKIIPISLRLDKKKNWNSKWIVNNDEYSNLLHFDLEIKKYFENIFNYKNLKLIDLNIV 60
Query: 59 RTHKNCRIIVYSARPGLIIGK-----------------------------------KGTD 83
+T N + VY + K +
Sbjct: 61 KTSNNINVYVYIQKNSKKYYKLSYNKIINHLNLYFLNHNIKLFIKNVQFFEFIKLRRNLK 120
Query: 84 IEKIRKKLSNMTNSEIHLSVNEVPKPEI--NATLIAQSIAQQLERRVVFRRAMKRAVQSA 141
+ K +N N + + N +I I Q LER+ ++ + + +
Sbjct: 121 KIFDKIKKNNRINKNVKKMIYNFSYAFYTKNINIITFYIKQTLERKKTHKKFINN-IDNM 179
Query: 142 MRFGAD------GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGS 195
++ G ++ GRLN ++ + + +G++PL TL I Y +T G
Sbjct: 180 LQEFFKMFSNFVGYRLQFKGRLNKSKRKKKMVFQKGKIPLNTLEYDIKYHFNEFKTPSGI 239
Query: 196 CGIKVYVSLR 205
C IK++V +
Sbjct: 240 CSIKLWVFFK 249
>gi|130076576|gb|ABO31946.1| ribosomal protein S3 [Itea virginica]
Length = 507
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 326 KVMELIEKLKNLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 384
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + + FR + V+ M+ G +G+++
Sbjct: 385 NTLIESVKIKSVYQSASPIAQDISFQPKNKTRSFRSIFSQIVKDIPLVMKKGVEGIRICC 444
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 445 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 495
>gi|302749115|gb|ADL64037.1| ribosomal protein S3 [Vitis sp. Qiu 94046]
Length = 483
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E + + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 310 KVMELIDKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 368
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++
Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 428
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 429 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 479
>gi|302748991|gb|ADL63975.1| ribosomal protein S3 [Reseda alba]
Length = 517
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 46/173 (26%), Positives = 85/173 (49%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ I + + + G +++K+R LSN T
Sbjct: 345 KVMELIEKFINLGGIEEL---IKGIEMMIEIILRKRRIPYGYNSYLNEVKKMRSFLSNRT 401
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQL-ERRVVFRRA---MKRAVQSAMRFGADGVKV 151
N+ + ++ +A+ IAQ I+ QL ++R FR + + + S M+ +G+++
Sbjct: 402 NTNTLIESVKIKSVYQSASPIAQDISFQLRKKRRSFRSIYTKIVKRIPSVMKKRVEGIRI 461
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE+++T+ Y G+ IDY A T YG G+KV++S
Sbjct: 462 CCSGRLKGAEIAKTDSYKYGKTSCNVFNQKIDYAPAEVSTRYGISGVKVWISF 514
>gi|288191305|gb|ADC44005.1| ribosomal protein S3 [Vitis aestivalis]
Length = 501
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E + + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 326 KVMELIDKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 384
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++
Sbjct: 385 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 444
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 445 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 495
>gi|302748766|gb|ADL63863.1| ribosomal protein S3 [Griselinia littoralis]
Length = 481
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 82/171 (47%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN T +
Sbjct: 308 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTKT 366
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++
Sbjct: 367 NTLIESVKIKSFYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 426
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 427 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 477
>gi|272716729|gb|ACZ95666.1| ribosomal protein S3 [Pinus monophylla]
Length = 557
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 48/148 (32%), Positives = 72/148 (48%), Gaps = 7/148 (4%)
Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + + G ++ K+R LSN TN+ + ++ +A+LIAQ I
Sbjct: 410 GMMIEIILKNRRIPYGYNYYLNEVRKMRSLLSNRTNTNTLIGSVKILN-YQSASLIAQDI 468
Query: 121 AQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
+ QL R FR + V+ M G G+++ SGRL GAE++RTEC G+
Sbjct: 469 SFQLRDRTRSFRSIFSQIVRDIPLVMPKGVRGIRICCSGRLKGAEIARTECREYGKTSCN 528
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSL 204
R IDY +A T YG G+KV++S
Sbjct: 529 VFRHKIDYASAKVSTRYGILGVKVWISF 556
Score = 57.7 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54
M +K+NPI RL +N + +S WF+ YG L+++D+ +R+Y + +
Sbjct: 1 MARKVNPISVRLNLNRSSDSSWFSDYY-YGKLVYQDVNLRDYFGSIRPPTRKTFGFRLGR 59
Query: 55 ILIERTHKNCRIIVY 69
+I K I ++
Sbjct: 60 CIIHHFPKRTFIHLF 74
>gi|302748919|gb|ADL63939.1| ribosomal protein S3 [Oncotheca balansae]
Length = 482
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ I + + G +++K+R LSN T
Sbjct: 310 KVMELIEKFIDLGGIGEL---IKGIEMMIEIILRNRIIPYGYNSYLNEVQKMRSLLSNRT 366
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++
Sbjct: 367 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRI 426
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 427 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 479
>gi|468426|gb|AAA35010.1| ribosomal protein S3 [Saccharomyces cerevisiae]
Length = 240
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 47/213 (22%), Positives = 82/213 (38%), Gaps = 21/213 (9%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ L + G + + + T +I+ + R ++G+ G
Sbjct: 13 ADGVNYAEL-------NEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLGENGRR 65
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K I L V ++A A+S+ +L + RRA V+
Sbjct: 66 INELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVRY 125
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A ++ + +G + Q + ID T G GI
Sbjct: 126 VMESGAKGCEVVVSGKLRAA-RAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQGVLGI 184
Query: 199 KVYVSL--------RDEVSDSDSTIPAAEHRVV 223
KV + + D+ + I E +
Sbjct: 185 KVKIMRDPAKSRTGPKALPDAVTIIEPKEEEPI 217
>gi|302748667|gb|ADL63814.1| ribosomal protein S3 [Cornus florida]
Length = 476
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 48/170 (28%), Positives = 84/170 (49%), Gaps = 7/170 (4%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ R I + + + G +++K+R LSN T
Sbjct: 310 KVMELIEKFIDLGGIGEL---RKSIEMMIEIILRKRRIPYGYNSYLNEVKKMRSLLSNRT 366
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQL-ERRVVFRRAMKRAVQSAMR-FGADGVKVIA 153
N+ + ++ +A+ IAQ I+ Q ++R FR + + V+ G +G+++
Sbjct: 367 NTNTLIESVKIQSVYQSASPIAQDISFQPRKKRRSFRSILTQIVKDLKFVKGVEGIRICC 426
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 427 SGRLKGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGISGVKVWIS 476
>gi|312220768|emb|CBY00709.1| similar to 40S ribosomal protein S3 [Leptosphaeria maculans]
Length = 264
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 42/187 (22%), Positives = 79/187 (42%), Gaps = 13/187 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ Q L + G + + + T II+ + ++G++G
Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V ++A +S+ +L + RRA ++
Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q + ID+ T G GI
Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGVLGI 187
Query: 199 KVYVSLR 205
KV +
Sbjct: 188 KVKIMRG 194
>gi|302748889|gb|ADL63924.1| ribosomal protein S3 [Myristica maingayi]
Length = 483
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 49/171 (28%), Positives = 81/171 (47%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++KIR LSN TN+
Sbjct: 314 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVQKIRSFLSNRTNT 372
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + +Q M G +G+++
Sbjct: 373 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRAFRSIFSQIVKDIQLVMPKGVEGIRICC 432
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 433 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRISY 483
>gi|224107577|ref|XP_002333496.1| predicted protein [Populus trichocarpa]
gi|222837065|gb|EEE75444.1| predicted protein [Populus trichocarpa]
Length = 551
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 6/145 (4%)
Query: 66 IIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQ 123
I + + G +++K+R LSN TN+ ++ ++ +A+LIAQ I+ Q
Sbjct: 401 ISIILRNIRIPYGYNSYLNEMKKMRSLLSNRTNTNTLITSVKIQSVYQSASLIAQDISFQ 460
Query: 124 LE-RRVVFRRAMKRAVQ---SAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
L +R F + V+ M +G+++ SGRL GAE++ TEC G+
Sbjct: 461 LSNKRRSFSSIFSKIVKDLSLLMNKWVEGIRICCSGRLKGAEIAGTECGKYGKTSCNLFN 520
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSL 204
IDY A T YG G+KV++S
Sbjct: 521 QKIDYAPAEVSTPYGISGVKVWISY 545
Score = 35.7 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWF---ARGSEYGALLHEDLKIREYL-QCHLKQAGVAKIL 56
M +K NPI RL +N + +S F YG L+++++ +R Y + + + +
Sbjct: 1 MARKGNPISVRLYLNRSSDSSRFITIDSIYYYGKLVYQNVNLRSYFGSPPTTKVSLGRCI 60
Query: 57 IERTHKNCRIIVYSARPG 74
I K R ++ P
Sbjct: 61 ILHFSK--RTFIHFFLPH 76
>gi|11467119|ref|NP_054420.1| ribosomal protein S3 [Marchantia polymorpha]
gi|585955|sp|P26865|RT03_MARPO RecName: Full=Ribosomal protein S3, mitochondrial
gi|250821|gb|AAB22413.1| ribosomal protein S3 [Marchantia polymorpha=liverwort, Peptide
Mitochondrial, 430 aa]
gi|786204|gb|AAC09417.1| rps3 [Marchantia polymorpha]
Length = 430
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 286 RYYYLKKMQSLFSNQTKTNTLIQPVKIASVYQSASLIAQEISWKLEQKKSFRQICRSIFK 345
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TEC G L IDY A T YG G+
Sbjct: 346 QIKKCPYVKGIRIGCSGRLNGAEIAKTECKKYGETSLHVFSDQIDYAKTQASTPYGILGV 405
Query: 199 KVYVSL 204
KV+VS
Sbjct: 406 KVWVSY 411
Score = 65.8 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 53/136 (38%), Gaps = 11/136 (8%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54
M QK+NPI RL +N + +S WF+ YG LL++DL R+Y + + +
Sbjct: 1 MAQKVNPISVRLNLNRSSDSSWFSDYY-YGKLLYQDLNFRDYFGSIRPPTGNTFGFRLGR 59
Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVN----EVPKPE 110
+I K I V+ +G K + + ++ + + E
Sbjct: 60 CIIHHFPKRTFIHVFFLDRLSQSRHQGLGAIPSVKLIRRINDNTVKQRNEVGIWPKKRYE 119
Query: 111 INATLIAQSIAQQLER 126
+ L + QL R
Sbjct: 120 YHDRLPSIQKIDQLLR 135
>gi|301107834|ref|XP_002902999.1| 40S ribosomal protein S3-3 [Phytophthora infestans T30-4]
gi|262098117|gb|EEY56169.1| 40S ribosomal protein S3-3 [Phytophthora infestans T30-4]
Length = 246
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 49/206 (23%), Positives = 82/206 (39%), Gaps = 18/206 (8%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E LQ L G + + + T II+ + R ++G+KG
Sbjct: 13 ADGVFYAEL-------NELLQRELYGDGYSGVEVRVTPMRTEIIIRATRTQEVLGEKGQR 65
Query: 84 IE---KIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I + +K N + + L V + + A+S+ +L + RRA V+
Sbjct: 66 IRALTSVVQKRFNFPDGAVELYAERVANRGLCSQAQAESLKYRLLGGLAVRRACYSVVRF 125
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA GV+VI SG+L A+ ++ + EG + + ++D G G+
Sbjct: 126 VMEAGAKGVQVIVSGKLR-AQRAKAMKFNEGYMVKTGNASQEYVDTAVRHVLMRQGVLGV 184
Query: 199 KVYVSLRDEVSDSDSTIPAAEHRVVE 224
KV + D T R ++
Sbjct: 185 KVSIM-----LPHDPTGKQGPKRALD 205
>gi|56180916|gb|AAV83556.1| ribosomal protein S3 [Halimeda cuneata]
gi|56180922|gb|AAV83560.1| ribosomal protein S3 [Halimeda cuneata]
gi|56180925|gb|AAV83562.1| ribosomal protein S3 [Halimeda cuneata]
gi|56180928|gb|AAV83564.1| ribosomal protein S3 [Halimeda cuneata]
Length = 161
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 38/161 (23%), Positives = 70/161 (43%), Gaps = 6/161 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S W+A Y + ED +R L +A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKYYSKYVLEDNFVRTLLSEKYNRARFEKIHISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPKPEINATLI 116
+ I++++ +P ++I + + NS++ + + + I
Sbjct: 61 IEDHLEIVIHAQKPDILIKGENLQKQIKTFLFQYRQIEWNSKLKVILYIFQCKTSASAAI 120
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGA--DGVKVIASG 155
A I + LE+R+ ++ + + R G+K+ SG
Sbjct: 121 ADFIVEHLEKRIPYKVVLNLLKKHLKRKKQSTLGMKIQISG 161
>gi|223928003|gb|ACN23654.1| ribosomal protein S3 [Halimeda lacunalis]
Length = 168
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 25/174 (14%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A + Y + ED IR L K+A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKTNYSKYVLEDNFIRTILSEKYKRAKFVKIQISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATL---- 115
+ I++++ +P ++IGKK ++ + +I + + E N+ L
Sbjct: 61 IEDHLEIVIHAQKPDILIGKK-----IDSRESLKIFQKQIKKFIFQYRGIEWNSKLKVIL 115
Query: 116 -----------IAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155
I I + LE+RV ++ K+ +Q + A G+K++ SG
Sbjct: 116 YIFRCKTSAFSIGDFIVEHLEKRVPYKVVFVLLKKHLQR-QKHSALGMKILISG 168
>gi|326436207|gb|EGD81777.1| 40S ribosomal protein S3 [Salpingoeca sp. ATCC 50818]
Length = 234
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 44/199 (22%), Positives = 79/199 (39%), Gaps = 14/199 (7%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT--NSE 98
E+LQ L + G A + + +T II+ + R ++G+KG I ++ +
Sbjct: 24 EFLQRSLGEQGYAGVEVRKTPNRTEIIILATRTQEVLGEKGRRIRELTGLVKKRFGFKDN 83
Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLN 158
+ L +V + A +S+ +L + RRA ++ M GA G +VI SG+L
Sbjct: 84 VELFAEKVANRGLCAMAQCESLRYKLLGGLAVRRACYGVLRLVMESGAKGCEVIISGKLR 143
Query: 159 GAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL---------RDE 207
A+ +++ + +G + R +ID G GIKV +
Sbjct: 144 -AQRAKSMKFNDGFMISAGHPTRDYIDTAVRHVLLRQGVLGIKVKIMRPYDPTGRNGPST 202
Query: 208 VSDSDSTIPAAEHRVVEKD 226
V I + V +
Sbjct: 203 VLPDTLEIREPKEEDVPEK 221
>gi|302748631|gb|ADL63796.1| ribosomal protein S3 [Celosia cristata]
Length = 472
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 51/168 (30%), Positives = 87/168 (51%), Gaps = 5/168 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ + ++ + G+ + LI+ II+ S R +++K+R LSN TN+
Sbjct: 306 KVMKLIEKLIDLGGI-RELIKGIEMMIEIILKSRRIPYRYNSYLNEVKKMRSLLSNRTNT 364
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLER-RVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ + ++ R FR + V+ M+ G +GV++
Sbjct: 365 NTLIKSVKIKSVYQSASPIAQDISLKPKKKRRSFRSIFSQIVKKIPLVMKKGVEGVRICC 424
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVY 201
SGRL GAE++RTEC G+ LR +DY +A T YG G+KV+
Sbjct: 425 SGRLGGAEIARTECGKYGKTSCNVLRQKMDYASAEVSTRYGIIGVKVW 472
>gi|302748830|gb|ADL63895.1| ribosomal protein S3 [Kadsura japonica]
gi|302749023|gb|ADL63991.1| ribosomal protein S3 [Schisandra sphenanthera]
Length = 481
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 5/170 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E+++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 313 KVMEFIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSVLSNRTNT 371
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M G +G+++
Sbjct: 372 NTLIESVKIKSFYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMPNGVEGIRICC 431
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 432 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 481
>gi|81176521|ref|YP_398405.1| rps3 [Triticum aestivum]
gi|169649058|gb|ACA62619.1| rps3 [Triticum aestivum]
Length = 537
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + + K+ I + + + G +++K+R LSN T
Sbjct: 353 KVMELIEKFIDLGRIGKL---IKGIEMMIEIILRKRIIPYGYNSYLNEVQKMRSFLSNRT 409
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERR-VVFRRAMKRAVQ---SAMRFGADGVKV 151
N+ + ++ +A+LIAQ I+ QL + FR + V+ M G +G+++
Sbjct: 410 NTNTLIESVKIKSVYQSASLIAQDISFQLRNNPISFRSIFSKIVKDIPLIMPKGVEGIRI 469
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T G G+KV +S
Sbjct: 470 CCSGRLGGAEIARTECGKYGKTSCNVFNQKIDYAPAEVSTRNGISGVKVRISY 522
Score = 41.1 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 7/89 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQ------CHLKQAGVAK 54
M +K NPI RL +N + + F+ YG L++D+ +R Y + +
Sbjct: 1 MARKGNPISVRLDLNRSSDPSRFSDYY-YGKSLYQDVNLRSYFSSIRPPTKLALGFRLGR 59
Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTD 83
+I K I + + +K +
Sbjct: 60 CIILHFPKRTFIHFFLPGRSPRLKRKKSR 88
>gi|302748523|gb|ADL63742.1| ribosomal protein S3 [Ailanthus altissima]
Length = 489
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 49/168 (29%), Positives = 81/168 (48%), Gaps = 5/168 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E + + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 323 KVMELIDKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 381
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M G +G+++
Sbjct: 382 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMNKGVEGIRICC 441
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVY 201
SGRL GAE++RTEC G+ IDY A T YG G+KV+
Sbjct: 442 SGRLEGAEIARTECGKYGKTSCNVFNQKIDYAPAEVSTRYGISGVKVW 489
>gi|302749097|gb|ADL64028.1| ribosomal protein S3 [Trillium sp. Qiu 95016]
Length = 481
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 47/173 (27%), Positives = 81/173 (46%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ + I + + + G +++K+R LSN T
Sbjct: 312 KVMELIEKFIDLGGIGEF---LKGIEMMIEIILRKRRIPYGYNSYLNEVQKMRSFLSNRT 368
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+LIAQ I+ Q +++ FR + V+ M G +G+++
Sbjct: 369 NTNTLMESVKIKSVYQSASLIAQDISFQPRNKKISFRSIFSKIVKDIPFIMPKGVEGIRI 428
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 429 CCSGRSGGAEIARTECGKYGKTSRNVFHHKIDYAPAEVSTRYGISGVKVRISY 481
>gi|302748949|gb|ADL63954.1| ribosomal protein S3 [Philydrum lanuginosum]
Length = 476
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 9/172 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E+++ + G+ ++ R I + + + G +++K+R LSN T
Sbjct: 308 KVMEFIEKFIDLGGIEEL---RKGIEMMIEIILRKRIIPYGYNSYLNEVQKMRSFLSNRT 364
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+LIAQ I+ Q FR + V+ M G +G+++
Sbjct: 365 NTNTLIESVKIKSVYQSASLIAQDISFQPRNNQRSFRSIFSKIVKDIPFIMPKGVEGIRI 424
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGRL GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 425 CCSGRLGGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 476
>gi|71057452|emb|CAJ18175.1| ribosomal protein S3 [Halimeda hummii]
Length = 165
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 12/166 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L K+A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKRHYSKYVLEDNFVRTILSEKYKRAKFEKIQISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN--MTNSEIHLSVN-----EVPKPEIN 112
+ I++++ + ++IGKK ++E +K++ +I + + + +
Sbjct: 61 IEDHLEIVIHAQKLDILIGKKSENLEIFQKQIKKFIFQYRQIEWNSKLKVILYIFRCKNT 120
Query: 113 ATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155
A+ IA I + LE+RV ++ K+ +Q + A G+KV +G
Sbjct: 121 ASSIADFIVEHLEKRVPYKVVFGLLKKHLQR-QKHSALGMKVQIAG 165
>gi|328541290|gb|AEB21869.1| ribosomal protein S3 [Mastigobryum limbatum]
Length = 374
Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ SN T + + ++ +A+LIAQ I+ +LER+ FR+ + +
Sbjct: 249 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLERKKSFRQICRSIFK 308
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 309 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 368
Query: 199 KVYVSL 204
KV+VS
Sbjct: 369 KVWVSY 374
>gi|302748810|gb|ADL63885.1| ribosomal protein S3 [Idiospermum australiense]
Length = 478
Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 5/170 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++KIR LSN TN+
Sbjct: 310 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVQKIRSLLSNRTNT 368
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
++ ++ +A+LIAQ I+ Q + FR + V+ M G +G+++
Sbjct: 369 NTNIESVKIKSVYQSASLIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMPKGVEGIRICC 428
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 429 SGRSEGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGISGVKVRIS 478
>gi|328541286|gb|AEB21867.1| ribosomal protein S3 [Mastigobryum lenormandii]
Length = 376
Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ SN T + + ++ +A+LIAQ I+ +LER+ FR+ + +
Sbjct: 251 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLERKKSFRQICRSIFK 310
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 311 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 370
Query: 199 KVYVSL 204
KV+VS
Sbjct: 371 KVWVSY 376
>gi|328541284|gb|AEB21866.1| ribosomal protein S3 [Bazzania involuta]
Length = 376
Score = 102 bits (255), Expect = 4e-20, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ SN T + + ++ +A+LIAQ I+ +LER+ FR+ + +
Sbjct: 251 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLERKKSFRQICRSIFK 310
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 311 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 370
Query: 199 KVYVSL 204
KV+VS
Sbjct: 371 KVWVSY 376
>gi|258576671|ref|XP_002542517.1| 40S ribosomal protein S3 [Uncinocarpus reesii 1704]
gi|237902783|gb|EEP77184.1| 40S ribosomal protein S3 [Uncinocarpus reesii 1704]
Length = 263
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 42/202 (20%), Positives = 80/202 (39%), Gaps = 13/202 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ Q L + G + + + T II+ + ++G++G
Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V ++A +S+ +L + RRA ++
Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q + ID T G GI
Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGI 187
Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220
KV + + +
Sbjct: 188 KVKIMRGSDPEGKSGPQKSLPD 209
>gi|302748929|gb|ADL63944.1| ribosomal protein S3 [Paracryphia alticola]
Length = 501
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 46/178 (25%), Positives = 83/178 (46%), Gaps = 5/178 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E + + G+ ++ I+ II+ + R +++K+R LSN T +
Sbjct: 320 KVMELIDKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVQKMRSLLSNRTKT 378
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + + + M+ G +G+++
Sbjct: 379 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSILSQIVKDIPLVMKKGVEGIRICC 438
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
SGR GAE++RTEC G+ IDY A T YG G+KV++S ++
Sbjct: 439 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISYSQKIKGR 496
>gi|114151587|ref|YP_740368.1| ribosomal protein S3 [Zea perennis]
gi|102567921|gb|ABF70838.1| ribosomal protein S3 [Zea perennis]
Length = 559
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + + K+ I + + + G +++K+R LSN T
Sbjct: 375 KVMELIEKFIDLGRIGKL---IKGIEMMIEIILRKRRIPYGYNSYLNEVQKMRSFLSNRT 431
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERR-VVFRRAMKRAVQ---SAMRFGADGVKV 151
N+ + ++ +A+LIAQ I+ QL + FR + V+ M G +G+++
Sbjct: 432 NTNTLIESVKIKSVYQSASLIAQDISFQLRNNPISFRSIFSKIVKDIPLIMPKGVEGIRI 491
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T G G+KV +S
Sbjct: 492 CCSGRLGGAEIARTECGKYGKTSCNVFNQKIDYAPAEVSTRNGISGVKVRISY 544
Score = 39.6 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 38/101 (37%), Gaps = 9/101 (8%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQ------CHLKQAGVAK 54
M +K NPI RL +N + + F+ YG L++D+ +R Y + +
Sbjct: 1 MARKGNPISVRLDLNRSSDPSRFSDYY-YGKSLYQDVNLRSYFSSIRPPTRLTFGFRLGR 59
Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95
+I K R ++ P + K D + K
Sbjct: 60 CIILHFPK--RTFIHFFLPRRPLRLKRRDKSRPGKDKGRWW 98
>gi|302748877|gb|ADL63918.1| ribosomal protein S3 [Menyanthes trifoliata]
Length = 492
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 46/171 (26%), Positives = 83/171 (48%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + + +++K+R LSN T +
Sbjct: 320 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRKIPYGYNFYLNEVKKMRSLLSNRTKT 378
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + ++ M+ G +G+++
Sbjct: 379 NTLIESVKIKSVYQSASSIAQDISFQPRNKTRSFRSIFSQIVKDIRLVMKKGVEGIRICC 438
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 439 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 489
>gi|108773415|ref|YP_635934.1| ribosomal protein S3 [Helicosporidium sp. ex Simulium jonesii]
gi|122244867|sp|Q2EEW0|RR3_HELSJ RecName: Full=Plastid 30S ribosomal protein S3
gi|87242990|gb|ABD33982.1| ribosomal protein S3 [Helicosporidium sp. ex Simulium jonesi]
Length = 241
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 47/230 (20%), Positives = 90/230 (39%), Gaps = 32/230 (13%)
Query: 8 ILFRLGVNCTWNSRWFARGSE-------------------YGALLHEDLKIREYL---QC 45
I RLG N T W + + L+ D ++ +Y+ +
Sbjct: 8 IGLRLGYNKTHKLIWSLSKNNPIFIQTNHFLEYIIKNDPFFCGLILIDFQLMQYIVVHKN 67
Query: 46 HLKQAGVAKILIERTHK-----NCRIIVYSARPGLIIGKK-----GTDIEKIRKKLSNMT 95
L K + + + S + I ++ K L +
Sbjct: 68 QLGNFSPLKNNLPNSINLFLKLKIATEIQSNFNSVFILEERLHFLFFKYLNKMKNLKMLN 127
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155
N +I + + + P + I + Q L + + RRA+ + + ++ GA+GVK+ G
Sbjct: 128 NLKIKVKIKFLNNPILEPQWIFYKLHQDLYKGINIRRALAKISSNVIKKGAEGVKIQIKG 187
Query: 156 RLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
R+NG + + +G++PLQ L + I+Y + +T YG G+K++V
Sbjct: 188 RINGVDKATVIVEEKGKMPLQNLSSEINYYSRALKTVYGLLGVKIWVFKG 237
>gi|130076580|gb|ABO31948.1| ribosomal protein S3 [Liquidambar styraciflua]
Length = 514
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 9/180 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E + + G+ ++ I + + G +++K+R LSN T
Sbjct: 333 KVMELIDKLIDLGGIGEL---IKGIEMLIEIILRNRIIPYGYNSYLNEVKKMRSLLSNRT 389
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ Q + FR + V+ M G +G+++
Sbjct: 390 NTNTLIESVKIKSVYQSASTIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMEKGVEGIRI 449
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
SGR GAE++RTEC G+ IDY A T YG G+KV++S +
Sbjct: 450 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISYSKKKGGR 509
>gi|115278555|ref|YP_762354.1| ribosomal protein S3 [Sorghum bicolor]
gi|114309676|gb|ABI60893.1| ribosomal protein S3 [Sorghum bicolor]
Length = 559
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 49/173 (28%), Positives = 79/173 (45%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + K+ I + + + G +++K+R LSN T
Sbjct: 375 KVMELIEKFIDLGRRGKL---IKGIEMMIEIILRKRIIPYGYNSYLNEVQKMRSFLSNRT 431
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERR-VVFRRAMKRAVQ---SAMRFGADGVKV 151
N+ + ++ +A+LIAQ I+ QL + FR + VQ M G +G+++
Sbjct: 432 NTNTLIESVKIKSVYQSASLIAQDISFQLRNNPISFRSIFSKIVQDIPLIMPKGVEGIRI 491
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T G G+KV +S
Sbjct: 492 CCSGRLGGAEIARTECGKYGKTSCNVFNQKIDYAPAEVSTRNGISGVKVRISY 544
Score = 40.0 bits (92), Expect = 0.28, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 38/101 (37%), Gaps = 9/101 (8%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQ------CHLKQAGVAK 54
M +K NPI RL +N + + F+ YG L++D+ +R Y + +
Sbjct: 1 MARKGNPISVRLDLNRSSDPSRFSDYY-YGKSLYQDVNLRSYFSSIRPPTRLTFGFRLGR 59
Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95
+I K R ++ P + K + + K
Sbjct: 60 CIILHFPK--RTFIHFFLPRRPLRLKRRNKSRPGKDKGRWW 98
>gi|302748679|gb|ADL63820.1| ribosomal protein S3 [Cryptocarya meisneriana]
Length = 478
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 5/170 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ + I+ II+ + R +++KIR LSN TN+
Sbjct: 310 KVMELIEKFIDLGGIGEF-IKGIEMMIEIILRNRRIPYGYNSYLNEVQKIRSLLSNRTNT 368
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + +Q M G +G+++
Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIQLVMPKGVEGIRICC 428
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 429 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 478
>gi|328767669|gb|EGF77718.1| hypothetical protein BATDEDRAFT_91509 [Batrachochytrium
dendrobatidis JAM81]
Length = 240
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 48/206 (23%), Positives = 88/206 (42%), Gaps = 18/206 (8%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+LQ L + G A + + T I++ + R ++G+KG
Sbjct: 13 ADGVFYAEL-------NEFLQRELAEEGYAGVEVRVTPARTEIVIRATRTQNVLGEKGRR 65
Query: 84 IEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ + N + + L +V ++A A+S+ +L + RRA V+
Sbjct: 66 IRELTSIVQKRFNYPENTVELYAEKVNNRGLSAVAQAESLRYKLLGGLAVRRACYGVVRF 125
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ +++G + Q + +IDY G GI
Sbjct: 126 VMESGAKGCEVVISGKLRAA-RAKSMKFVDGFMIHSGQPAKEYIDYAVRHVLLRQGVLGI 184
Query: 199 KVYVSLRDEVSDSDSTIPAAEHRVVE 224
KV + + D + + +
Sbjct: 185 KVKIMQ-----EWDPSGKTGPKKPLP 205
>gi|302748852|gb|ADL63906.1| ribosomal protein S3 [Lomandra obliqua]
Length = 480
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 5/170 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ G + ++ II+ + + +++K+R LSN TN
Sbjct: 312 KVMELIEK-FIDLGSTREFLKGIEMMIEIILRNRKIAYGYNSYLNEVQKMRSFLSNRTNI 370
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLER-RVVFRRAMKRAVQ---SAMRFGADGVKVIA 153
+ ++ +A+LIAQ I+ QL ++ FR + V+ M G +G+++
Sbjct: 371 NTLIESVKIKSVYQSASLIAQDISFQLRNNKISFRSIFSKIVKDIPLIMPKGVEGIRICC 430
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGRL GAE++ TEC G+ I Y +A T YG G+KV++S
Sbjct: 431 SGRLGGAEIAGTECGKYGKTSCNVFYQKIYYASAEVSTRYGILGVKVWIS 480
>gi|288191235|gb|ADC43970.1| ribosomal protein S3 [Rhizanthes lowii]
Length = 484
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 76/169 (44%), Gaps = 6/169 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I + + G +++K S TN+
Sbjct: 316 KVMELIEKFIDLGGIGEL---IKGIEMMIEIILRNRRIPYGY-NYYFNEMQKMRSLWTNT 371
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRV--VFRRAMKRAVQSAMRFGADGVKVIASG 155
+ + ++ +A+ IAQ I+ QL + + + + M+ G +G+++ SG
Sbjct: 372 KTLIESVKIQSFYQSASPIAQDISFQLRNKTSPYILSQIVKDLSLVMKKGVEGIRICCSG 431
Query: 156 RLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
RL GAE +RTEC G+ IDY A T YG G+KV++S
Sbjct: 432 RLEGAERARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 480
>gi|328541280|gb|AEB21864.1| ribosomal protein S3 [Bazzania trilobata]
Length = 374
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ SN T + + ++ +A+LIAQ I+ +LER+ FR+ + +
Sbjct: 249 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLERKKSFRQICRSIFK 308
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A+T YG G+
Sbjct: 309 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQADTPYGILGV 368
Query: 199 KVYVSL 204
KV+VS
Sbjct: 369 KVWVSY 374
>gi|116207712|ref|XP_001229665.1| 40S ribosomal protein S3 [Chaetomium globosum CBS 148.51]
gi|88183746|gb|EAQ91214.1| 40S ribosomal protein S3 [Chaetomium globosum CBS 148.51]
Length = 260
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 45/206 (21%), Positives = 83/206 (40%), Gaps = 18/206 (8%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ Q L + G + + + T II+ + ++G++G
Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V ++A +S+ +L + RRA ++
Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q + ID T G GI
Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGI 187
Query: 199 KVYVSLRDEVSDSDSTIPAAEHRVVE 224
KV + SD A + +
Sbjct: 188 KVKIMRG-----SDPEGKAGPQKSLP 208
>gi|302748705|gb|ADL63833.1| ribosomal protein S3 [Dioncophyllum tholloni]
Length = 496
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 86/171 (50%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ + ++ + G+ + LI+ II+ + + +++K+R LSN TN+
Sbjct: 322 KVMKLIEKFIDLGGI-RELIKGIEMMIEIILKNRKIPYGYNSYLNEVKKMRSLLSNRTNT 380
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + + FR + V+ M+ G +G+++
Sbjct: 381 NTLIESVKIKSFYQSASPIAQDISFQPKNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 440
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY +A T YG G+KV++S
Sbjct: 441 SGRLEGAEIARTECGKYGKTSRNVFYHKIDYASAEVSTRYGILGVKVWISY 491
>gi|302748909|gb|ADL63934.1| ribosomal protein S3 [Nymphaea sp. Qiu 91029]
Length = 482
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 51/197 (25%), Positives = 80/197 (40%), Gaps = 22/197 (11%)
Query: 30 GALLHED----------LKIREYLQCHLKQAGVAKI----LIERTHKNCR--IIVYSARP 73
L ED +K+R + + K I K I +
Sbjct: 286 SNNLIEDAREQLLGQLRIKLRNLMDKEKVMKLIEKFIDLGRIGELIKGIEMMIEIILRNR 345
Query: 74 GLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-F 130
+ G +++K+R LSN TN+ + ++ +A+ IAQ I+ Q + F
Sbjct: 346 RIPYGYNSYLNEVQKMRSLLSNRTNTNTLMESVKIKSVYQSASPIAQDISFQPRNKTRSF 405
Query: 131 RRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTA 187
R + V+ M G +G+++ SGR GAE++RTEC G+ IDY A
Sbjct: 406 RSIFSQIVKDIPLVMPKGVEGIRISCSGRSKGAEIARTECGKYGKTSCNVFHQKIDYAPA 465
Query: 188 VAETAYGSCGIKVYVSL 204
T YG G+KV +S
Sbjct: 466 EVSTRYGISGVKVRISY 482
>gi|114151619|ref|YP_740426.1| ribosomal protein S3 [Zea luxurians]
gi|110287615|gb|ABG65661.1| ribosomal protein S3 [Zea luxurians]
Length = 556
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + + K+ I + + + G +++K+R LSN T
Sbjct: 372 KVMELIEKFIDLGRIGKL---IKGIEMMIEIILRKRRIPYGYNSYLNEVQKMRSFLSNRT 428
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERR-VVFRRAMKRAVQ---SAMRFGADGVKV 151
N+ + ++ +A+LIAQ I+ QL + FR + V+ M G +G+++
Sbjct: 429 NTNTLIESVKIKSVYQSASLIAQDISFQLRNNPISFRSIFSKIVKDIPLIMPKGVEGIRI 488
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T G G+KV +S
Sbjct: 489 CCSGRLGGAEIARTECGKYGKTSCNVFNQKIDYAPAEVSTRNGISGVKVRISY 541
Score = 40.7 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 35/92 (38%), Gaps = 7/92 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQ------CHLKQAGVAK 54
M +K NPI RL +N + + F+ YG L++D+ +R Y + +
Sbjct: 1 MARKGNPISVRLDLNRSSDPSRFSDYY-YGKSLYQDVNLRSYFSSIRPPTRLTFGFRLGR 59
Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEK 86
+I K I + R K +K
Sbjct: 60 CIILHFPKRTFIHFFLPRRLKRRDKSRPGKDK 91
>gi|302749117|gb|ADL64038.1| ribosomal protein S3 [Vriesea splendens]
Length = 472
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 9/172 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + + ++ I + + + G +++K+R LSN T
Sbjct: 304 KVMELIEKFIDLGRIGEL---IKGIEMMIEIILRKRIIPYGYNSYLNEVQKMRSFLSNRT 360
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQ---SAMRFGADGVKV 151
N+ + ++ +A+LIAQ I+ Q FR + V+ M G +G+++
Sbjct: 361 NTNTLIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSKIVKDIPLIMPKGVEGIRI 420
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGRL GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 421 CCSGRLGGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 472
>gi|302748645|gb|ADL63803.1| ribosomal protein S3 [Hirtella triandra]
Length = 416
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 50/176 (28%), Positives = 76/176 (43%), Gaps = 10/176 (5%)
Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLS---- 92
IR+ L+ AG K I + + K KK+
Sbjct: 230 HFIRQ--ANDLRFAGTTKTTISLFPFFGATFFFLRDGVEVYNNNNFSYLKEMKKMRSLLS 287
Query: 93 NMTNSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADG 148
N TN+ + ++ +A+ IAQ I+ QL +R FR + V+ M+ G +G
Sbjct: 288 NRTNTNTLIESVKIQSVYQSASPIAQDISFQLRNKRRSFRSIFSKIVKDIPLVMKKGVEG 347
Query: 149 VKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
+++ SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 348 IRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWISY 403
>gi|288191309|gb|ADC44007.1| ribosomal protein S3 [Peridiscus lucidus]
Length = 282
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + + ++ I + + G +++K+R LSN T
Sbjct: 107 KVMELIEKFIDLGRIGEL---IKGIEMMIEIILRNRIIPYGYNSYLNEVKKMRSLLSNRT 163
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++
Sbjct: 164 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRI 223
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 224 CCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKVWISY 276
>gi|81687782|dbj|BAE47670.2| rps3 [Triticum aestivum]
Length = 561
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + + K+ I + + + G +++K+R LSN T
Sbjct: 377 KVMELIEKFIDLGRIGKL---IKGIEMMIEIILRKRIIPYGYNSYLNEVQKMRSFLSNRT 433
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERR-VVFRRAMKRAVQ---SAMRFGADGVKV 151
N+ + ++ +A+LIAQ I+ QL + FR + V+ M G +G+++
Sbjct: 434 NTNTLIESVKIKSVYQSASLIAQDISFQLRNNPISFRSIFSKIVKDIPLIMPKGVEGIRI 493
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T G G+KV +S
Sbjct: 494 CCSGRLGGAEIARTECGKYGKTSCNVFNQKIDYAPAEVSTRNGISGVKVRISY 546
Score = 40.7 bits (94), Expect = 0.14, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 36/101 (35%), Gaps = 7/101 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQ------CHLKQAGVAK 54
M +K NPI RL +N + + F+ YG L++D+ +R Y + +
Sbjct: 1 MARKGNPISVRLDLNRSSDPSRFSDYY-YGKSLYQDVNLRSYFSSIRPPTKLALGFRLGR 59
Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95
+I K I + + +K + +
Sbjct: 60 CIILHFPKRTFIHFFLPGRSPRLKRKQDKKSRPVLQEKGWW 100
>gi|328541228|gb|AEB21838.1| ribosomal protein S3 [Herbertus sakurai]
Length = 375
Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLKKMQSLFSNQTKTNTLIQPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE++RTE G L IDY A T YG G+
Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIARTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369
Query: 199 KVYVSL 204
KV+VS
Sbjct: 370 KVWVSY 375
>gi|288191233|gb|ADC43969.1| ribosomal protein S3 [Rafflesia tuan-mudae]
Length = 499
Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats.
Identities = 45/172 (26%), Positives = 80/172 (46%), Gaps = 9/172 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ + + I + + G +++K R LSN
Sbjct: 329 KVMELIEKLINLGGIGE---WIKGIDMMIEILLRNSRIPYGYNSYLNEMQKRRSLLSNRQ 385
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERR---VVFRRAMKRAVQSAMRFGADGVKVI 152
++ + ++ +A+ IAQ I+ QL + +F + +K + M+ G +G+++
Sbjct: 386 KTQTLIESVKIQSVYQSASPIAQDISFQLRNKKSPYIFSQIVKD-LPLVMKKGVEGIRIC 444
Query: 153 ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE +RTEC G+ IDY A T YG G+KV++S
Sbjct: 445 CSGRLEGAERARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 496
>gi|130076560|gb|ABO31938.1| ribosomal protein S3 [Altingia excelsa]
Length = 514
Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats.
Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 9/180 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E + + G+ ++ I + + G +++K+R LSN T
Sbjct: 333 KVMELIDKLIDLGGIGEL---IKGIEMLIEIILRNRIIPYGYNSYLNEVKKMRSLLSNRT 389
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ Q + FR + V+ M G +G+++
Sbjct: 390 NTNTLIESVKIKSVYQSASTIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMEKGVEGIRI 449
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
SGR GAE++RTEC G+ IDY A T YG G+KV++S +
Sbjct: 450 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISYSKKKGGR 509
>gi|119719404|ref|YP_919899.1| ribosomal protein S3 [Thermofilum pendens Hrk 5]
gi|119524524|gb|ABL77896.1| SSU ribosomal protein S3P [Thermofilum pendens Hrk 5]
Length = 187
Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats.
Identities = 55/176 (31%), Positives = 87/176 (49%), Gaps = 4/176 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN- 96
+ EYLQ L +A +T ++IVY+ PGL+IG+KG +I+ I + L
Sbjct: 2 MLNEYLQRQLVRANYVHAQFFKTPIGTKVIVYAGVPGLVIGRKGANIKAIAEVLEREFGI 61
Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156
+ V EVP ++NA ++A +A+ L R V FRRA A+ M GA G +++ SG+
Sbjct: 62 ENPQIDVVEVPNQDLNAKIMAYRVARALVRGVRFRRAALVALNRIMAAGARGAEIVISGK 121
Query: 157 LNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210
L ++ RTE + G VP + +D G G+KV + ++ D
Sbjct: 122 LT-SQRHRTEKFTRGYVPKSGEPGEELVDEAIVHVLLKLGMYGVKVRIMKPAKMPD 176
>gi|67614912|ref|XP_667397.1| ribosomal protein [Cryptosporidium hominis TU502]
gi|54658527|gb|EAL37164.1| ribosomal protein [Cryptosporidium hominis]
Length = 221
Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats.
Identities = 45/191 (23%), Positives = 83/191 (43%), Gaps = 7/191 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L C L + G A + + T II+ + R ++G KG I ++ + N
Sbjct: 24 EFLSCTLAEDGYAGVEVRVTPIKTEIIIRATRTREVLGVKGRRIRELTSLIQKRFNFPEG 83
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L + + A A+S+ +L + V RRA ++ M GA G +VI SG+L
Sbjct: 84 SVELFAERIENRGLCAMAQAESLRYKLLKGVAVRRACYGVLRHVMESGAKGCEVIVSGKL 143
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR-DEVSDSDST 214
A+ +++ + +G + Q R +D G G++V + L D + +
Sbjct: 144 R-AQRAKSMKFRDGYMIATGQPFRDFVDKAVRNVMMKQGVLGVQVKIMLPYDPEGKTGPS 202
Query: 215 IPAAEHRVVEK 225
P + +V +
Sbjct: 203 KPLPDAVMVRE 213
>gi|302748816|gb|ADL63888.1| ribosomal protein S3 [Illicium floridanum]
Length = 486
Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 317 KVMEFIDKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSVLSNRTNT 375
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M G +G+++
Sbjct: 376 NTLMESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMPNGVEGIRICC 435
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 436 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRISY 486
>gi|288191140|gb|ADC43923.1| ribosomal protein S3 [Aneulophus africanus]
Length = 292
Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + +++K+R LSN TN+
Sbjct: 117 KVMELIEKFINLGRIGEL-IKGIEMLIEIILRKIKIPYGYNSYLNEMKKMRSLLSNRTNT 175
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL ++ FR + V+ M+ G +G+++
Sbjct: 176 NTLIKSVKIKSVYQSASPIAQDISFQLRNKKRAFRSIFSQIVKDIPLVMKKGVEGIRICC 235
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 236 SGRSGGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGIPGVKVWISY 286
>gi|302749013|gb|ADL63986.1| ribosomal protein S3 [Sargentodoxa cuneata]
Length = 478
Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 48/170 (28%), Positives = 83/170 (48%), Gaps = 5/170 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E+++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 310 KVMEFIEKLIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 368
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M G +G+++
Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMPKGVEGIRICC 428
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RTEC G+ IDY +A T YG G+KV +S
Sbjct: 429 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYASAEVSTRYGISGVKVRIS 478
>gi|288191297|gb|ADC44001.1| ribosomal protein S3 [Cucumis sativus]
Length = 348
Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 49/166 (29%), Positives = 78/166 (46%), Gaps = 4/166 (2%)
Query: 43 LQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLS 102
L G LI+ II+ + R + +++K+R LSN T + +
Sbjct: 177 LIEKFIDLGWIGELIKGIEMMIEIILRNRRIPVGYNSYLNEVQKMRSFLSNRTKTNTLIE 236
Query: 103 VNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGRLN 158
++ +A+ IAQ I+ QL ++ FR + + VQ M G +G+++ SGR
Sbjct: 237 SVKIKSVYQSASPIAQDISFQLRKKTRSFRSILSQIVQDIPFVMNKGVEGIRICCSGRSE 296
Query: 159 GAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 297 GAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGISGVKVWISY 342
>gi|25987146|gb|AAN75744.1|AF319170_1 ribosomal protein S3 [Helianthus annuus]
Length = 560
Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN T +
Sbjct: 376 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSLLSNRTKT 434
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + ++ M+ G +G+++
Sbjct: 435 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIRLVMKKGVEGIRICC 494
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 495 SGRSEGAEIARTECENYGKTSSNVFNQKIDYAPAEVSTRYGISGVKVWISY 545
>gi|94502719|ref|YP_588265.1| ribosomal protein S3 [Zea mays subsp. mays]
gi|94502720|ref|YP_588320.1| ribosomal protein S3 [Zea mays subsp. mays]
gi|114151654|ref|YP_740401.1| ribosomal protein S3 [Zea mays subsp. parviglumis]
gi|40795158|gb|AAR91202.1| ribosomal protein S3 [Zea mays]
gi|40795159|gb|AAR91203.1| ribosomal protein S3 [Zea mays]
gi|93116110|gb|ABE98742.1| ribosomal protein S3 [Zea mays subsp. mays]
gi|93116153|gb|ABE98784.1| ribosomal protein S3 [Zea mays subsp. mays]
gi|102567987|gb|ABF70871.1| ribosomal protein S3 [Zea mays subsp. parviglumis]
gi|102579656|gb|ABF70936.1| ribosomal protein S3 [Zea mays subsp. mays]
Length = 559
Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + + K+ I + + + G +++K+R LSN T
Sbjct: 375 KVMELIEKFIDLGRIGKL---IKGIEMMIEIILRKRRIPYGYNSYLNEVQKMRSFLSNRT 431
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERR-VVFRRAMKRAVQ---SAMRFGADGVKV 151
N+ + ++ +A+LIAQ I+ QL + FR + V+ M G +G+++
Sbjct: 432 NTNTLIESVKIKSVYQSASLIAQDISFQLRNNPISFRSIFSKIVKDIPLIMPKGVEGIRI 491
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T G G+KV +S
Sbjct: 492 CCSGRLGGAEIARTECGKYGKTSCNVFNQKIDYAPAEVSTRDGISGVKVRISY 544
Score = 39.6 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 38/101 (37%), Gaps = 9/101 (8%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQ------CHLKQAGVAK 54
M +K NPI RL +N + + F+ YG L++D+ +R Y + +
Sbjct: 1 MARKGNPISVRLDLNRSSDPSRFSDYY-YGKSLYQDVNLRSYFSSIRPPTRLTFGFRLGR 59
Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95
+I K R ++ P + K D + K
Sbjct: 60 CIILHFPK--RTFIHFFLPRRPLRLKRRDKSRPGKDKGRWW 98
>gi|134045|sp|P27928|RT03_MAIZE RecName: Full=Ribosomal protein S3, mitochondrial
gi|13921|emb|CAA40690.1| mitochondrial S3-like ribosomal protein [Zea mays]
Length = 559
Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + + K+ I + + + G +++K+R LSN T
Sbjct: 375 KVMELIEKFIDLGRIGKL---IKGIEMMIEIILRKRRIPYGYNSYLNEVQKMRSFLSNRT 431
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERR-VVFRRAMKRAVQ---SAMRFGADGVKV 151
N+ + ++ +A+LIAQ I+ QL + FR + V+ M G +G+++
Sbjct: 432 NTNTLIESVKIKSVYQSASLIAQDISFQLRNNPISFRSIFSKIVKDIPLIMPKGVEGIRI 491
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T G G+KV +S
Sbjct: 492 CCSGRLGGAEIARTECGKYGKTSCNVFNQKIDYAPAEVSTRDGISGVKVRISY 544
Score = 39.6 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 38/101 (37%), Gaps = 9/101 (8%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQ------CHLKQAGVAK 54
M +K NPI RL +N + + F+ YG L++D+ +R Y + +
Sbjct: 1 MARKGNPISVRLDLNRSSDPSRFSDYY-YGKSLYQDVNLRSYFSSIRPPTRLTFGFRLGR 59
Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95
+I K R ++ P + K D + K
Sbjct: 60 CIILHFPK--RTFIHFFLPRRPLRLKRRDKSRPGKDKGRWW 98
>gi|121702671|ref|XP_001269600.1| 40S ribosomal protein S3, putative [Aspergillus clavatus NRRL 1]
gi|119397743|gb|EAW08174.1| 40S ribosomal protein S3, putative [Aspergillus clavatus NRRL 1]
Length = 267
Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 83/208 (39%), Gaps = 18/208 (8%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ Q L + G + + + T II+ + ++G++G
Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V ++A +S+ +L + RRA ++
Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q + ID T G GI
Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGI 187
Query: 199 KVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
KV + SD A + +
Sbjct: 188 KVKIMRG-----SDPEGKAGPQKTLPDS 210
>gi|328541184|gb|AEB21816.1| ribosomal protein S3 [Telaranea maorensis]
Length = 375
Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Query: 84 IEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMR 143
++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + + +
Sbjct: 254 LKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFKQIKK 313
Query: 144 F-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202
G+++ SGRLNGAE+++TE G L IDY A T YG G+KV+V
Sbjct: 314 CPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDRIDYAKTQASTPYGILGVKVWV 373
Query: 203 SL 204
S
Sbjct: 374 SY 375
>gi|302748669|gb|ADL63815.1| ribosomal protein S3 [Corokia cotoneaster]
Length = 484
Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN T +
Sbjct: 311 KVMELIEKLIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSLLSNRTKT 369
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + ++ M+ G +G+++
Sbjct: 370 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIRLVMKKGVEGIRICC 429
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 430 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 480
>gi|66362866|ref|XP_628399.1| 40S ribosomal protein S3, KH domain [Cryptosporidium parvum Iowa
II]
gi|46229434|gb|EAK90252.1| 40S ribosomal protein S3, KH domain [Cryptosporidium parvum Iowa
II]
gi|323508759|dbj|BAJ77273.1| cgd7_2250 [Cryptosporidium parvum]
Length = 221
Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 45/191 (23%), Positives = 83/191 (43%), Gaps = 7/191 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L C L + G A + + T II+ + R ++G KG I ++ + N
Sbjct: 24 EFLSCTLAEDGYAGVEVRVTPIKTEIIIRATRTREVLGVKGRRIRELTSLIQKRFNFPEG 83
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L + + A A+S+ +L + V RRA ++ M GA G +VI SG+L
Sbjct: 84 SVELFAERIENRGLCAMAQAESLRYKLLKGVAVRRACYGVLRHVMESGAKGCEVIVSGKL 143
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR-DEVSDSDST 214
A+ +++ + +G + Q R +D G G++V + L D + +
Sbjct: 144 R-AQRAKSMKFRDGYMIATGQPFRDFVDKAVRNVMMKQGVLGVQVKIMLPYDPEGKTGPS 202
Query: 215 IPAAEHRVVEK 225
P + +V +
Sbjct: 203 KPLPDAVMVRE 213
>gi|328541276|gb|AEB21862.1| ribosomal protein S3 [Bazzania nitida]
Length = 375
Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369
Query: 199 KVYVSL 204
KV+VS
Sbjct: 370 KVWVSY 375
>gi|302749043|gb|ADL64001.1| ribosomal protein S3 [Sphenostemon lobosporus]
Length = 497
Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 323 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRPLLSNRTNT 381
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++
Sbjct: 382 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 441
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 442 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 492
>gi|328541288|gb|AEB21868.1| ribosomal protein S3 [Bazzania yoshinagana]
Length = 375
Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ SN T + + ++ +A+LIAQ I+ +LER+ FR+ + +
Sbjct: 250 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLERKKSFRQICRSIFK 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQAATPYGILGV 369
Query: 199 KVYVSL 204
KV+VS
Sbjct: 370 KVWVSY 375
>gi|302749019|gb|ADL63989.1| ribosomal protein S3 [Saururus cernuus]
Length = 483
Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 5/170 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E + + G+ ++ I+ II+ + +++KIR LSN TN+
Sbjct: 315 KVMELINKLIDLGGIGEL-IKGIEMMMEIILKNRSIPYGYNSYLNEVQKIRSLLSNRTNT 373
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M G +G+++
Sbjct: 374 NTLMESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMPKGVEGIRICC 433
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RTEC + IDY A T YG G+KV++S
Sbjct: 434 SGRSKGAEIARTECGKHRKTSRNVFNQKIDYAPAEVSTRYGISGVKVWIS 483
>gi|328541230|gb|AEB21839.1| ribosomal protein S3 [Mastigophora woodsii]
Length = 375
Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLKKMQSLFSNQTKTNTLIQPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE++RTE G L IDY A T YG G+
Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIARTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369
Query: 199 KVYVSL 204
KV+VS
Sbjct: 370 KVWVSY 375
>gi|328541226|gb|AEB21837.1| ribosomal protein S3 [Lepicolea attenuata]
Length = 375
Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLKKMQSLFSNQTKTNTLIQPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE++RTE G L IDY A T YG G+
Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIARTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369
Query: 199 KVYVSL 204
KV+VS
Sbjct: 370 KVWVSY 375
>gi|152060913|sp|A1RXG6|RS3_THEPD RecName: Full=30S ribosomal protein S3P
Length = 202
Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 55/176 (31%), Positives = 87/176 (49%), Gaps = 4/176 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN- 96
+ EYLQ L +A +T ++IVY+ PGL+IG+KG +I+ I + L
Sbjct: 17 MLNEYLQRQLVRANYVHAQFFKTPIGTKVIVYAGVPGLVIGRKGANIKAIAEVLEREFGI 76
Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156
+ V EVP ++NA ++A +A+ L R V FRRA A+ M GA G +++ SG+
Sbjct: 77 ENPQIDVVEVPNQDLNAKIMAYRVARALVRGVRFRRAALVALNRIMAAGARGAEIVISGK 136
Query: 157 LNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210
L ++ RTE + G VP + +D G G+KV + ++ D
Sbjct: 137 LT-SQRHRTEKFTRGYVPKSGEPGEELVDEAIVHVLLKLGMYGVKVRIMKPAKMPD 191
>gi|328541248|gb|AEB21848.1| ribosomal protein S3 [Zoopsis liukiuensis]
gi|328541250|gb|AEB21849.1| ribosomal protein S3 [Zoopsis setulosa]
Length = 375
Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE++RTE G L IDY A T YG G+
Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIARTEYRKYGETSLHVFSDQIDYAKTQASTPYGILGV 369
Query: 199 KVYVSL 204
KV+V
Sbjct: 370 KVWVXY 375
>gi|93116066|gb|ABE98699.1| ribosomal protein S3 [Zea mays subsp. mays]
Length = 559
Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + + K+ I + + + G +++K+R LSN T
Sbjct: 375 KVMELIEKFIDLGRIGKL---IKGIEMMIEIILRKRRIPYGYNSYLNEVQKMRSFLSNRT 431
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERR-VVFRRAMKRAVQ---SAMRFGADGVKV 151
N+ + ++ +A+LIAQ I+ QL + FR + V+ M G +G+++
Sbjct: 432 NTNTLIESVKIKSVYQSASLIAQDISFQLRNNPISFRSIFSKIVKDIPLIMPKGVEGIRI 491
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T G G+KV +S
Sbjct: 492 CCSGRLGGAEIARTECGKYGKTSCNVFNQKIDYAPAEVSTRDGISGVKVRISY 544
Score = 39.6 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 38/101 (37%), Gaps = 9/101 (8%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQ------CHLKQAGVAK 54
M +K NPI RL +N + + F+ YG L++D+ +R Y + +
Sbjct: 1 MARKGNPISVRLDLNRSSDPSRFSDYY-YGKSLYQDVNLRSYFSSIRPPTRLTFGFRLGR 59
Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95
+I K R ++ P + K D + K
Sbjct: 60 CIILHFPK--RTFIHFFLPRRPLRLKRRDKSRPGKDKGRWW 98
>gi|328541278|gb|AEB21863.1| ribosomal protein S3 [Bazzania affinis]
Length = 374
Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ SN T + + ++ +A+LIAQ I+ +LER+ FR+ + +
Sbjct: 249 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLERKKSFRQICRSIFK 308
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 309 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQAATPYGILGV 368
Query: 199 KVYVSL 204
KV+VS
Sbjct: 369 KVWVSY 374
>gi|169616949|ref|XP_001801889.1| hypothetical protein SNOG_11650 [Phaeosphaeria nodorum SN15]
gi|111059574|gb|EAT80694.1| hypothetical protein SNOG_11650 [Phaeosphaeria nodorum SN15]
Length = 266
Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 42/202 (20%), Positives = 79/202 (39%), Gaps = 13/202 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ Q L + G + + + T II+ + ++G++G
Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V ++A +S+ +L + RRA ++
Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q + ID T G GI
Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKDFIDEATRHVLLRQGVLGI 187
Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220
KV + +
Sbjct: 188 KVKIMRGSDPEGKAGPSKTLPD 209
>gi|112253914|ref|YP_717168.1| ribosomal protein S3 [Brassica napus]
gi|37591116|dbj|BAC98918.1| ribosomal protein S3 [Brassica napus]
Length = 553
Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 48/183 (26%), Positives = 87/183 (47%), Gaps = 5/183 (2%)
Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90
LL +D K+ E ++ G+ ++ I+ II+ +++K+R
Sbjct: 367 NLLGKD-KVMELIEKFKNLGGIEEL-IKVIDMMIEIILRKRGIPYRYNSYFYEVKKMRSF 424
Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSAMRFGADGV 149
LSN TN++ + ++ +A+LIAQ I+ QL+ +R F + V+ + +G+
Sbjct: 425 LSNRTNTKTLIESVKIKSVYQSASLIAQDISFQLKNKRRSFHSIFAKIVKEIPKR-VEGI 483
Query: 150 KVIASGRLN-GAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208
++ SGRL AE ++T+CY + IDY +A T YG G+KV++S +
Sbjct: 484 RICFSGRLKDAAEKAQTKCYKHRKTSCNVFNQKIDYASAEVSTRYGILGVKVWISYSQKK 543
Query: 209 SDS 211
Sbjct: 544 GGR 546
Score = 51.9 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 40/101 (39%), Gaps = 9/101 (8%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54
M +K NPI RLG N + +S WF+ YG +++D+ +R Y + +
Sbjct: 1 MARKGNPISVRLGKNRSSDSSWFSEYY-YGKFVYQDVNLRSYFGSIRPPTRLTFGFRLGR 59
Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95
++ K R ++ P K + + K+
Sbjct: 60 CILLHFPK--RTFIHFFLPRRPRRLKRREKTRPGKEKGRWW 98
>gi|328541204|gb|AEB21826.1| ribosomal protein S3 [Kurzia brevicalycina]
Length = 375
Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFR 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369
Query: 199 KVYVSL 204
KV+VS
Sbjct: 370 KVWVSY 375
>gi|164422218|gb|ABY55191.1| ribosomal protein S3 [Bambusa oldhamii]
Length = 558
Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + + K+ I + + + G +++K+R LSN T
Sbjct: 374 KVMELIEKFIDLGRIGKL---IKGIEMMIEIILRKRIIPYGYNSYLNEVQKMRSFLSNRT 430
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERR-VVFRRAMKRAVQ---SAMRFGADGVKV 151
N+ + ++ +A+LIAQ I+ QL + FR + V+ M G +G+++
Sbjct: 431 NTNTLIESVKIKSVYQSASLIAQDISFQLRNNPISFRSIFSQIVKDIPLIMPKGVEGIRI 490
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T G G+KV +S
Sbjct: 491 CCSGRLGGAEIARTECGKYGKTSCNVFNQKIDYAPAEVSTRNGISGVKVRISY 543
Score = 39.2 bits (90), Expect = 0.42, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 38/101 (37%), Gaps = 9/101 (8%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ------AGVAK 54
M +K NPI RL +N + + F+ YG L++D+ +R Y + +
Sbjct: 1 MARKGNPISVRLDLNRSSDPSRFSDYY-YGKSLYQDVNLRSYFSSIRPPTILTFGFRLGR 59
Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95
+I K R ++ P + K D + K
Sbjct: 60 CIILHFPK--RTFIHFFLPRRPLRLKRRDKSRPGKDKGRWW 98
>gi|328541268|gb|AEB21858.1| ribosomal protein S3 [Bazzania tricrenata]
Length = 374
Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ SN T + + ++ +A+LIAQ I+ +LER+ FR+ + +
Sbjct: 249 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLERKKSFRQICRSIFK 308
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 309 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQAATPYGILGV 368
Query: 199 KVYVSL 204
KV+VS
Sbjct: 369 KVWVSY 374
>gi|302749101|gb|ADL64030.1| ribosomal protein S3 [Triphyophyllum peltatum]
Length = 477
Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 86/171 (50%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ + ++ + G+ + LI+ II+ + + +++K+R LSN TN+
Sbjct: 304 KVMKLIEKFIDLGGI-RELIKGIEMMIEIILKNRKIPYGYNSYLNEVKKMRSLLSNRTNT 362
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ + + + FR + V+ M+ G +G+++
Sbjct: 363 NTLIESVKIKSFYQSASPIAQDISLKPKNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 422
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY +A T YG G+KV++S
Sbjct: 423 SGRLEGAEIARTECGKYGKTSRNVFNHKIDYASAEVSTRYGILGVKVWISY 473
>gi|46122111|ref|XP_385609.1| hypothetical protein FG05433.1 [Gibberella zeae PH-1]
Length = 255
Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 43/214 (20%), Positives = 83/214 (38%), Gaps = 18/214 (8%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ Q L + G + + + T II+ + ++G++G
Sbjct: 11 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 63
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V ++A +S+ +L + RRA ++
Sbjct: 64 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 123
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q + ID+ T G GI
Sbjct: 124 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKDFIDHATRHVLLRQGVLGI 182
Query: 199 KVYVSLRDEVSDSDSTIPAAEH-----RVVEKDS 227
KV + + E+ +
Sbjct: 183 KVKIMRGSDPEGKAGPQKTLPDAVTIIEPKEEQA 216
>gi|302748583|gb|ADL63772.1| ribosomal protein S3 [Blandfordia grandiflora]
Length = 476
Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 9/172 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ + ++ L G+ + I + + G +++K+R LSN T
Sbjct: 308 KVMKLIEKFLDLGGIGEF---LKGIEMMIEIILRNRIIPYGYNSYLNEVQKMRSFLSNRT 364
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+LIAQ I+ Q FR + V+ M G +G+++
Sbjct: 365 NTNTLIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSKIVKDIPFIMPKGVEGIRI 424
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 425 CCSGRSGGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGISGVKVRIS 476
>gi|22550360|ref|NP_689361.1| ribosomal protein S3 [Chaetosphaeridium globosum]
gi|22417026|gb|AAM96625.1|AF494279_30 ribosomal protein S3 [Chaetosphaeridium globosum]
Length = 324
Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 34/96 (35%), Positives = 48/96 (50%)
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+A IA I Q++E + FR K ++ G+++ SGR NGAE+++TEC
Sbjct: 229 YQSAASIAADIVQKIESKKSFRSICKFLFSNSFGASIKGIRIACSGRFNGAEIAKTECRK 288
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
G P IDY A T YG GIKV+V +
Sbjct: 289 YGASPFHVFSEKIDYAQTKASTPYGIMGIKVWVCYK 324
Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 4/98 (4%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
M QK+NPI RL VN + +S WF+ Y LL+EDL +REY V + +I R+
Sbjct: 1 MAQKVNPISLRLDVNRSSDSLWFSDYY-YTKLLYEDLNLREYFNS--IHKMVTRCIIHRS 57
Query: 61 HKNCR-IIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
I ++ K + + K+ + ++
Sbjct: 58 FGLYTCIHLFCLPRKRRKHKVSRLLNSVTKEQATVSMR 95
>gi|328541320|gb|AEB21884.1| ribosomal protein S3 [Lepidozia spinosissima]
Length = 375
Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369
Query: 199 KVYVSL 204
KV+VS
Sbjct: 370 KVWVSY 375
>gi|302748939|gb|ADL63949.1| ribosomal protein S3 [Pentaphragma sp. Duangjai 49]
Length = 478
Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 45/170 (26%), Positives = 82/170 (48%), Gaps = 9/170 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ + ++ + G+ ++ R I + + + G ++ K+R LSN T
Sbjct: 312 KVMQLIEKFIDLGGIGEL---RKGMEMMIEIILRKRRIPYGYNFYLNEVHKMRSLLSNRT 368
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
+ ++ ++ +A+LIAQ I+ Q + FR + + V++ M+ G +G+++
Sbjct: 369 KTNTNIESVKIKSVYQSASLIAQDISFQPRNKTRSFRSILSQIVKNIPLVMKKGVEGIRI 428
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVY 201
SGR GAE++RTEC G+ IDY A T YG G+KV+
Sbjct: 429 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVW 478
>gi|302748867|gb|ADL63913.1| ribosomal protein S3 [Mauloutchia chapelieri]
Length = 478
Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 5/170 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++KIR LSN TN+
Sbjct: 310 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVQKIRSFLSNRTNT 368
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + +Q M G +G+++
Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRAFRSIFSKIVKDIQLVMPKGVEGIRICC 428
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 429 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 478
>gi|119187711|ref|XP_001244462.1| 40S ribosomal protein S3 [Coccidioides immitis RS]
gi|303316826|ref|XP_003068415.1| 40S ribosomal protein S3, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240108096|gb|EER26270.1| 40S ribosomal protein S3, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320038258|gb|EFW20194.1| 40S ribosomal protein S3 [Coccidioides posadasii str. Silveira]
Length = 263
Score = 101 bits (253), Expect = 6e-20, Method: Composition-based stats.
Identities = 42/202 (20%), Positives = 80/202 (39%), Gaps = 13/202 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ Q L + G + + + T II+ + ++G++G
Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V ++A +S+ +L + RRA ++
Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q + ID T G GI
Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGI 187
Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220
KV + + +
Sbjct: 188 KVKIMRGSDPEGKSGPQKSLPD 209
>gi|302748901|gb|ADL63930.1| ribosomal protein S3 [Nerium oleander]
Length = 484
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + + ++ I + + + G +++K+R LSN T
Sbjct: 311 KVMELIEKFIDLGRIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEVKKMRSLLSNKT 367
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ Q + FR + V+ M G +GV++
Sbjct: 368 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMTKGVEGVRI 427
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 428 CCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 480
>gi|56180919|gb|AAV83558.1| ribosomal protein S3 [Halimeda cuneata]
Length = 161
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 33/135 (24%), Positives = 61/135 (45%), Gaps = 4/135 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S W+A Y + ED +R L +A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKYYSKYVLEDNFVRTLLSEKYNRARFEKIHISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM---TNSEIHLSVNEVPKPEINATLI 116
+ I++++ +P ++I + + NS++ + + + I
Sbjct: 61 IEDHLEIVIHAQKPDILIKGENLQKQIKTFLFQYRQIEWNSKLKVILYIFQCKTSASAAI 120
Query: 117 AQSIAQQLERRVVFR 131
A I + LE+R+ ++
Sbjct: 121 ADFIVEHLEKRIPYK 135
>gi|89280717|ref|YP_514647.1| ribosomal protein S3 [Oryza sativa Indica Group]
gi|194033228|ref|YP_002000565.1| ribosomal protein S3 [Oryza sativa Japonica Group]
gi|1173302|sp|P46773|RT03_ORYSJ RecName: Full=Ribosomal protein S3, mitochondrial
gi|769732|dbj|BAA04792.1| ribosomal protein S3 [Oryza sativa Japonica Group]
gi|23495388|dbj|BAC19869.1| Ribosomal protein S3 [Oryza sativa Japonica Group]
gi|74100084|gb|AAZ99248.1| ribosomal protein S3 [Oryza sativa Indica Group]
gi|74100139|gb|AAZ99302.1| ribosomal protein S3 [Oryza sativa Japonica Group]
gi|74100193|gb|AAZ99355.1| ribosomal protein S3 [Oryza sativa Japonica Group]
gi|285026173|dbj|BAI68005.1| ribosomal protein small subunit 3 [Oryza sativa Indica Group]
Length = 538
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + + K+ I + + + G +++K+R LSN T
Sbjct: 354 KVMELIEKFIYLGRIGKL---IKGIEMMIEIILRKRIIPYGYNSYLNEVQKMRSFLSNRT 410
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERR-VVFRRAMKRAVQ---SAMRFGADGVKV 151
N+ + ++ +A+LIAQ I+ QL + FR + V+ M G +G+++
Sbjct: 411 NTNTLIESVKIKSVYQSASLIAQDISFQLGNNPISFRSIFSQIVKDIPLIMPKGVEGIRI 470
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T G G+KV +S
Sbjct: 471 CCSGRLGGAEIARTECGKYGKTSCNVFNQKIDYALAEVSTRNGISGVKVRISY 523
Score = 39.6 bits (91), Expect = 0.35, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 38/101 (37%), Gaps = 9/101 (8%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ------AGVAK 54
M +K NPI RL +N + + F+ YG L++D+ +R Y + +
Sbjct: 1 MARKGNPISVRLDLNRSSDPSRFSDYY-YGKSLYQDVNLRSYFSSIRPPTILTFGFRLGR 59
Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95
+I K R ++ P + K D + K
Sbjct: 60 CIILHFPK--RTFIHFFLPRRPLRLKRRDKSRPGKDKGRWW 98
>gi|328541222|gb|AEB21835.1| ribosomal protein S3 [Hygrolembidium rigidum]
Length = 375
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ + K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLRKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFR 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369
Query: 199 KVYVSL 204
KV+VS
Sbjct: 370 KVWVSY 375
>gi|328541218|gb|AEB21833.1| ribosomal protein S3 [Lembidium nutans]
Length = 375
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ + K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLRKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFR 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369
Query: 199 KVYVSL 204
KV+VS
Sbjct: 370 KVWVSY 375
>gi|302748967|gb|ADL63963.1| ribosomal protein S3 [Pleea tenuifolia]
Length = 476
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 5/170 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ + I+ II+ + R +++K+R LSN TN+
Sbjct: 308 KVMELIEKFIDLGGIGEF-IKGIEMMIEIILRNRRIPYGYNSYLNEVQKMRSFLSNRTNT 366
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQ---SAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q +R+ FR + V+ M G +G+++
Sbjct: 367 NTFIESVKIKSVYQSASPIAQDISFQPRNKRISFRSIFSQIVKDIPLIMPKGVEGIRICC 426
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 427 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 476
>gi|328541182|gb|AEB21815.1| ribosomal protein S3 [Chiloscyphus semiteres]
Length = 376
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 251 RYYYLKKMQSLFSNQTKTNTLIQPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 310
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 311 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDRIDYAKTQASTPYGILGV 370
Query: 199 KVYVSL 204
KV+VS
Sbjct: 371 KVWVSY 376
>gi|289065030|ref|YP_003433841.1| ribosomal protein small subunit 3 [Oryza rufipogon]
gi|285026112|dbj|BAI67945.1| ribosomal protein small subunit 3 [Oryza rufipogon]
Length = 527
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + + K+ I + + + G +++K+R LSN T
Sbjct: 343 KVMELIEKFIYLGRIGKL---IKGIEMMIEIILRKRIIPYGYNSYLNEVQKMRSFLSNRT 399
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERR-VVFRRAMKRAVQ---SAMRFGADGVKV 151
N+ + ++ +A+LIAQ I+ QL + FR + V+ M G +G+++
Sbjct: 400 NTNTLIESVKIKSVYQSASLIAQDISFQLGNNPISFRSIFSQIVKDIPLIMPKGVEGIRI 459
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T G G+KV +S
Sbjct: 460 CCSGRLGGAEIARTECGKYGKTSCNVFNQKIDYALAEVSTRNGISGVKVRISY 512
>gi|328541314|gb|AEB21881.1| ribosomal protein S3 [Lepidozia reptans]
gi|328541316|gb|AEB21882.1| ribosomal protein S3 [Lepidozia sp. 2 Shaw 5789]
gi|328541318|gb|AEB21883.1| ribosomal protein S3 [Lepidozia fauriana]
gi|328541324|gb|AEB21886.1| ribosomal protein S3 [Lepidozia laevifolia]
gi|328541326|gb|AEB21887.1| ribosomal protein S3 [Lepidozia bisbifida]
Length = 375
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369
Query: 199 KVYVSL 204
KV+VS
Sbjct: 370 KVWVSY 375
>gi|328541206|gb|AEB21827.1| ribosomal protein S3 [Kurzia helophila]
Length = 375
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 1/129 (0%)
Query: 77 IGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKR 136
+ ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ +
Sbjct: 247 FSSRYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRS 306
Query: 137 AVQSAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGS 195
+ + G+++ SGRLNGAE+++TE G L IDY A T YG
Sbjct: 307 IFRQIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGI 366
Query: 196 CGIKVYVSL 204
G+KV+VS
Sbjct: 367 LGVKVWVSY 375
>gi|326533734|dbj|BAK05398.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 278
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 73/171 (42%), Gaps = 6/171 (3%)
Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMT 95
I E+ L + G + + TH II+ + ++G+KG I ++ +K
Sbjct: 24 INEFFTRELAEEGYSGCEVRVTHARTEIIIRATHTQEVLGEKGRRIRELTSLVQKRFKFP 83
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155
+ + L +V ++A A+S+ +L + RRA ++ M GA G +V+ SG
Sbjct: 84 ENSLELYAEKVQNRGLSAVAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSG 143
Query: 156 RLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
+L A ++ + +G + Q R +D G GIKV +
Sbjct: 144 KLRAA-RAKAMKFTDGFMIHSGQPARDFVDQAVRHVLLRQGVLGIKVKIMK 193
>gi|328541246|gb|AEB21847.1| ribosomal protein S3 [Zoopsis macrophylla]
Length = 374
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 38/124 (30%), Positives = 66/124 (53%), Gaps = 1/124 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 251 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 310
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TEC G L IDY A T YG G+
Sbjct: 311 QIKKCPYVKGIRIGCSGRLNGAEIAKTECKKYGETSLHVFSDQIDYAKTQASTPYGILGV 370
Query: 199 KVYV 202
KV+V
Sbjct: 371 KVWV 374
>gi|328541242|gb|AEB21845.1| ribosomal protein S3 [Zoopsis leitgebiana]
Length = 374
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 38/124 (30%), Positives = 66/124 (53%), Gaps = 1/124 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 251 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 310
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TEC G L IDY A T YG G+
Sbjct: 311 QIKKCPYVKGIRIGCSGRLNGAEIAKTECKKYGETSLHVFSDQIDYAKTQASTPYGILGV 370
Query: 199 KVYV 202
KV+V
Sbjct: 371 KVWV 374
>gi|328541190|gb|AEB21819.1| ribosomal protein S3 [Kurzia sp. Brown 03/140a]
Length = 375
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFR 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE++RTE G L IDY A T YG G+
Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIARTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369
Query: 199 KVYVSL 204
KV+VS
Sbjct: 370 KVWVSY 375
>gi|169764753|ref|XP_001816848.1| 40S ribosomal protein S3 [Aspergillus oryzae RIB40]
gi|238503978|ref|XP_002383221.1| 40S ribosomal protein S3, putative [Aspergillus flavus NRRL3357]
gi|83764702|dbj|BAE54846.1| unnamed protein product [Aspergillus oryzae]
gi|220690692|gb|EED47041.1| 40S ribosomal protein S3, putative [Aspergillus flavus NRRL3357]
Length = 266
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 83/208 (39%), Gaps = 18/208 (8%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ Q L + G + + + T II+ + ++G++G
Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V ++A +S+ +L + RRA ++
Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q + ID T G GI
Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGI 187
Query: 199 KVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
KV + SD A + +
Sbjct: 188 KVKIMRG-----SDPEGKAGPQKTLPDS 210
>gi|70990926|ref|XP_750312.1| 40S ribosomal protein S3 [Aspergillus fumigatus Af293]
gi|119496667|ref|XP_001265107.1| 40S ribosomal protein S3, putative [Neosartorya fischeri NRRL 181]
gi|66847944|gb|EAL88274.1| 40S ribosomal protein S3, putative [Aspergillus fumigatus Af293]
gi|119413269|gb|EAW23210.1| 40S ribosomal protein S3, putative [Neosartorya fischeri NRRL 181]
gi|159130785|gb|EDP55898.1| 40S ribosomal protein S3, putative [Aspergillus fumigatus A1163]
Length = 266
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 45/208 (21%), Positives = 83/208 (39%), Gaps = 18/208 (8%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ Q L + G + + + T II+ + ++G++G
Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V ++A +S+ +L + RRA ++
Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q + ID T G GI
Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGI 187
Query: 199 KVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
KV + SD A + +
Sbjct: 188 KVKIMRG-----SDPEGKAGPQKTLPDS 210
>gi|302748639|gb|ADL63800.1| ribosomal protein S3 [Chamaedorea tenella]
Length = 474
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 9/172 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ I + + + G +++K+R LSN T
Sbjct: 306 KVMELIEKFIDLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEVKKMRSFLSNRT 362
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQ---SAMRFGADGVKV 151
N+ + ++ +A+LIAQ I+ Q FR + V+ M G +G+++
Sbjct: 363 NNNTLIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSKIVKDIPLIMPKGVEGIRI 422
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGRL GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 423 CCSGRLGGAEIARTECGKYGKTSRNVFHQKIDYAPATVSTRYGISGVKVRIS 474
>gi|145254885|ref|XP_001398791.1| 40S ribosomal protein S3 [Aspergillus niger CBS 513.88]
gi|134084376|emb|CAK48715.1| unnamed protein product [Aspergillus niger]
Length = 266
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 45/203 (22%), Positives = 82/203 (40%), Gaps = 18/203 (8%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ Q L + G + + + T II+ + ++G++G
Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V ++A +S+ +L + RRA ++
Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q + ID T G GI
Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGI 187
Query: 199 KVYVSLRDEVSDSDSTIPAAEHR 221
KV + SD A +
Sbjct: 188 KVKIMRG-----SDPEGKAGPQK 205
>gi|171686174|ref|XP_001908028.1| hypothetical protein [Podospora anserina S mat+]
gi|170943048|emb|CAP68701.1| unnamed protein product [Podospora anserina S mat+]
Length = 262
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 45/206 (21%), Positives = 83/206 (40%), Gaps = 18/206 (8%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ Q L + G + + + T II+ + ++G++G
Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V ++A +S+ +L + RRA ++
Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q + ID T G GI
Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGI 187
Query: 199 KVYVSLRDEVSDSDSTIPAAEHRVVE 224
KV + SD A + +
Sbjct: 188 KVKIMRG-----SDPEGKAGPQKSLP 208
>gi|145615557|ref|XP_360299.2| 40S ribosomal protein S3 [Magnaporthe oryzae 70-15]
gi|145022366|gb|EDK06386.1| 40S ribosomal protein S3 [Magnaporthe oryzae 70-15]
Length = 262
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 45/206 (21%), Positives = 82/206 (39%), Gaps = 18/206 (8%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ Q L + G + + + T II+ + ++G++G
Sbjct: 17 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 69
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + L +V ++A +S+ +L + RRA ++
Sbjct: 70 IRELTSLIQKRFKFPADSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 129
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q + ID T G GI
Sbjct: 130 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGI 188
Query: 199 KVYVSLRDEVSDSDSTIPAAEHRVVE 224
KV + SD A + +
Sbjct: 189 KVKIMRG-----SDPEGKAGPQKSLP 209
>gi|328541322|gb|AEB21885.1| ribosomal protein S3 [Lepidozia sp. 1 von Konrat 6/20-4]
Length = 375
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369
Query: 199 KVYVSL 204
KV+VS
Sbjct: 370 KVWVSY 375
>gi|288191172|gb|ADC43939.1| ribosomal protein S3 [Goupia glabra]
Length = 505
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 68/127 (53%), Gaps = 4/127 (3%)
Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS 140
+++K+R LSN TN+ + ++ +A+ IAQ I+ QL + FR + V+
Sbjct: 373 NEMKKMRSLLSNRTNTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKD 432
Query: 141 A---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197
M+ G +G+++ SGRL GAE++RTEC G+ IDY A T YG G
Sbjct: 433 IPLVMKKGVEGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILG 492
Query: 198 IKVYVSL 204
+KV++S
Sbjct: 493 VKVWISY 499
>gi|223927413|gb|ACN23331.1| ribosomal protein S3 [Halimeda renschii]
Length = 191
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYVLEDNFLRTILPKKYNKAGFEKIKISRK 60
Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNM 94
+ I++ + +P ++IGKKG ++E +K++ +
Sbjct: 61 IEGHIEIVINAQKPDILIGKKGENLEAFQKEIKKL 95
>gi|288191299|gb|ADC44002.1| ribosomal protein S3 [Heterostemon otophorus]
Length = 494
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 44/144 (30%), Positives = 73/144 (50%), Gaps = 6/144 (4%)
Query: 66 IIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQ 123
I + + G +++K+R LSN TN+ + ++ +A+ IAQ I+ Q
Sbjct: 351 IEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNTNTLIESVKIKSVYQSASPIAQDISFQ 410
Query: 124 LERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
L ++ FR + V+ M+ G +G+++ SGR GAE++RTEC G+
Sbjct: 411 LRKKTRSFRSIFSKIVKDIPLVMKKGVEGIRICCSGRSEGAEIARTECGKYGKTSRNVFN 470
Query: 180 AHIDYGTAVAETAYGSCGIKVYVS 203
IDY +A T YG G+KV++S
Sbjct: 471 QKIDYASAEVSTRYGISGVKVWIS 494
>gi|328541188|gb|AEB21818.1| ribosomal protein S3 [Kurzia dendroides]
Length = 375
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFR 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 310 QIRKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369
Query: 199 KVYVSL 204
KV+VS
Sbjct: 370 KVWVSY 375
>gi|302748537|gb|ADL63749.1| ribosomal protein S3 [Ancistrocladus tectorius]
Length = 480
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ + ++ + G+ ++ I + + G +++K+R LSN T
Sbjct: 307 KVMKLIEKFIDLGGIREL---IKGIEMMIEIILKNRIIPYGYNSYLNEVKKMRSLLSNRT 363
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ Q + + FR + V+ M+ G +G+++
Sbjct: 364 NTNTLIESVKIQSFYKSASPIAQDISFQPKNKTRSFRSIFSKIVKDIPLVMKKGVEGIRI 423
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY +A T YG G+KV++S
Sbjct: 424 CCSGRLEGAEIARTECGKYGKTSRNVFNHKIDYASAEVSTRYGILGVKVWISY 476
>gi|302748917|gb|ADL63938.1| ribosomal protein S3 [Oncidium sphacelatum]
Length = 476
Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats.
Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 10/179 (5%)
Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIR 88
L+ +D I E ++ + + ++ I + + G +++K+R
Sbjct: 302 NLMGQDKVI-ELIEKFIDLGRIGELQNRI---EMMIEIILRNRRIPYGYNSYLNEVQKMR 357
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQSA---MRF 144
LSN T + + ++ +A+LIAQ I+ Q FR + VQ M
Sbjct: 358 SFLSNRTKTNTLMESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSQIVQDIPLRMPQ 417
Query: 145 GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
G +G+++ SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 418 GVEGIRICCSGRSGGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGISGVKVRIS 476
>gi|328541310|gb|AEB21879.1| ribosomal protein S3 [Lepidozia setigera]
Length = 375
Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369
Query: 199 KVYVSL 204
KV+VS
Sbjct: 370 KVWVSY 375
>gi|328541224|gb|AEB21836.1| ribosomal protein S3 [Trichocolea tomentosa]
Length = 375
Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLKKMQSLFSNQTKTNTLIQPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 310 QMKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369
Query: 199 KVYVSL 204
KV+VS
Sbjct: 370 KVWVSY 375
>gi|130076562|gb|ABO31939.1| ribosomal protein S3 [Cercidiphyllum japonicum]
Length = 481
Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E + + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 306 KVIELIDKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 364
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++
Sbjct: 365 NTLIESVKIKSVYQSASTIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 424
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 425 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 475
>gi|302748665|gb|ADL63813.1| ribosomal protein S3 [Coriaria myrtifolia]
Length = 504
Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 7/174 (4%)
Query: 38 KIREYLQCHLKQAGVAKILI-ERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNM 94
K+ E + + G+ ++ R I + + G +I+K+R LSN
Sbjct: 325 KVIELIDKFIDLGGIGELRKGFRKGIEMMIEIILRNRRIPYGYNSYLNEIKKMRSLLSNR 384
Query: 95 TNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQ---SAMRFGADGVK 150
T + + ++ +A+ IAQ I+ QL + FR + V+ M+ G G++
Sbjct: 385 TKTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDLSLVMKKGVGGIR 444
Query: 151 VIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
+ SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 445 ICCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 498
>gi|302749037|gb|ADL63998.1| ribosomal protein S3 [Sparganium americanum]
Length = 476
Score = 101 bits (252), Expect = 8e-20, Method: Composition-based stats.
Identities = 48/172 (27%), Positives = 79/172 (45%), Gaps = 9/172 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E + + + +I + I + + + G +++K+R LSN T
Sbjct: 308 KVMELIDKLID---LGRIGLLIKGIEMMIEIILRKRIIPYGYNSYLNEVKKMRSFLSNRT 364
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQ---SAMRFGADGVKV 151
N+ + ++ +A+LIAQ I+ Q FR + V+ M G +G+++
Sbjct: 365 NTNTLIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSKIVKDIPLIMPKGVEGIRI 424
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGRL GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 425 CCSGRLGGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 476
>gi|328541194|gb|AEB21821.1| ribosomal protein S3 [Megalembidium insulanum]
gi|328541196|gb|AEB21822.1| ribosomal protein S3 [Isolembidium anomalum]
Length = 375
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFR 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369
Query: 199 KVYVSL 204
KV+VS
Sbjct: 370 KVWVSY 375
>gi|307103536|gb|EFN51795.1| hypothetical protein CHLNCDRAFT_59796 [Chlorella variabilis]
Length = 230
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 13/186 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E L L G + + + T +I+ + R ++G KG
Sbjct: 13 ADGVFYAEL-------NELLMRELGGEGYSGVEVRVTPMRTEVIIRATRTQNVLGVKGRR 65
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + L +V + A A+S+ +L + RRA ++
Sbjct: 66 IRELTSVVQKRFKFPEGSVELYAEKVANRGLCAVAQAESMRYKLLGGLAVRRACYGVLRF 125
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +VI SG+L A+ +++ + +G + + +ID T G GI
Sbjct: 126 VMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMVSSGNPVHEYIDSATRHVLLRQGVLGI 184
Query: 199 KVYVSL 204
KV +
Sbjct: 185 KVRIMK 190
>gi|302748971|gb|ADL63965.1| ribosomal protein S3 [Polygala cruciata]
Length = 498
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 83/172 (48%), Gaps = 5/172 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + +++K+R LSN T +
Sbjct: 324 KVMELIEKFIDLGRIGEL-IKGIEMMIEIILIKNQIPYGYNSYLNEVKKMRSLLSNRTKT 382
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL ++ FR + + M+ G +G+++
Sbjct: 383 NTLIESVKIKSVYQSASPIAQDISFQLRKKTRSFRSIFSKIVTDIPLVMKKGVEGIRICC 442
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
SGRL GAE++RTEC G+ IDY +A T YG G+KV++S
Sbjct: 443 SGRLKGAEIARTECGKYGKTSRNVFHHKIDYASAEVSTRYGISGVKVWISYG 494
>gi|223927419|gb|ACN23335.1| ribosomal protein S3 [Halimeda distorta]
Length = 172
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYVLEDHFLRTILPKKYNKAGFEKIKISRK 60
Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNM 94
+ I++ + +P ++IGKKG ++E +K++ +
Sbjct: 61 IEGHIEIVINAQKPDILIGKKGENLEAFQKEIKKL 95
>gi|242785057|ref|XP_002480514.1| 40S ribosomal protein S3, putative [Talaromyces stipitatus ATCC
10500]
gi|218720661|gb|EED20080.1| 40S ribosomal protein S3, putative [Talaromyces stipitatus ATCC
10500]
Length = 266
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 42/202 (20%), Positives = 79/202 (39%), Gaps = 13/202 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ Q L + G + + + T II+ + ++G++G
Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V ++A +S+ +L + RRA ++
Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q + ID T G GI
Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGI 187
Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220
KV + +
Sbjct: 188 KVKIMRGSDPEGKSGPQKTLPD 209
>gi|45775225|gb|AAR01945.1| ribosomal protein S3 [Cycas revoluta]
Length = 579
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 51/175 (29%), Positives = 80/175 (45%), Gaps = 6/175 (3%)
Query: 43 LQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIH 100
L L G LI+ II+ + + G +++K+R LS+ TN+
Sbjct: 396 LMEKLIDLGGIGELIKGIGMIDAIILRNRSGRIPYGYNYYLNEVQKMRSLLSDGTNTNTS 455
Query: 101 LSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQSA---MRFGADGVKVIASGR 156
+ ++ +A+LIAQ I+ QL FR + V+ M G+++ SGR
Sbjct: 456 IGSVKIESVYQSASLIAQDISFQLRNGTGSFRSIFGQIVRDITFVMPKRVKGIRICCSGR 515
Query: 157 LNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
L GAE++RTEC G+ IDY +A T YG G+KV++S +E
Sbjct: 516 LKGAEIARTECREYGKTSCNVFDHKIDYASAKVCTRYGILGVKVWISYSNERKGR 570
Score = 51.9 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54
M +++NPI RL +N + +S WF+ YG L+++D+ +R+Y + +
Sbjct: 1 MAREVNPISVRLNLNRSSDSSWFSDYY-YGKLVYQDVNLRDYFGSIRPPTRKTFGFRLGR 59
Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTD 83
+I K I ++ R + ++G
Sbjct: 60 CIIHHFTKRTFIHLFLPRRPRRLKRRGKS 88
>gi|769730|dbj|BAA06834.1| ribosomal protein S3 [Oryza sativa Japonica Group]
Length = 499
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + + K+ I + + + G +++K+R LSN T
Sbjct: 315 KVMELIEKFIYLGRIGKL---IKGIEMMIEIILRKRIIPYGYNSYLNEVQKMRSFLSNRT 371
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERR-VVFRRAMKRAVQ---SAMRFGADGVKV 151
N+ + ++ +A+LIAQ I+ QL + FR + V+ M G +G+++
Sbjct: 372 NTNTLIESVKIKSVYQSASLIAQDISFQLGNNPISFRSIFSQIVKDIPLIMPKGVEGIRI 431
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T G G+KV +S
Sbjct: 432 CCSGRLGGAEIARTECGKYGKTSCNVFNQKIDYALAEVSTRNGISGVKVRISY 484
>gi|310793027|gb|EFQ28488.1| ribosomal protein S3 [Glomerella graminicola M1.001]
Length = 261
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 43/214 (20%), Positives = 82/214 (38%), Gaps = 18/214 (8%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ Q L + G + + + T II+ + ++G++G
Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V ++A +S+ +L + RRA ++
Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q + ID T G GI
Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGI 187
Query: 199 KVYVSLRDEVSDSDSTIPAAEH-----RVVEKDS 227
KV + + E+ +
Sbjct: 188 KVKIMRGSDPEGKAGPQKTLPDAVSVLEPKEEQA 221
>gi|328541302|gb|AEB21875.1| ribosomal protein S3 [Telaranea heterotexta]
Length = 375
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFR 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369
Query: 199 KVYVSL 204
KV+VS
Sbjct: 370 KVWVSY 375
>gi|223927422|gb|ACN23337.1| ribosomal protein S3 [Halimeda opuntia]
Length = 174
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKKYYSKYVLEDHFLRTILPKKYNKAGFEKIKISRK 60
Query: 61 HKNC-RIIVYSARPGLIIGKKGTDIEKIRKKLSNM 94
+ I++ + +P ++IGKKG ++E +K++ N+
Sbjct: 61 IEGHIEIVINAQKPDILIGKKGENLEAFQKEIKNL 95
>gi|223928072|gb|ACN23700.1| ribosomal protein S3 [Halimeda tuna]
Length = 153
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 76/151 (50%), Gaps = 11/151 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L K+A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKRHYSKYVLEDNFVRTILSEKYKRAKFEKIQISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN--MTNSEIHLSVN-----EVPKPEIN 112
+ I++++ +P ++IGKK ++E +K++ +I + + + +
Sbjct: 61 IEDHLEIVIHAQKPDILIGKKSENLEVFQKQIKKFIFQYRQIEWNSKLKVILYIFRCKNT 120
Query: 113 ATLIAQSIAQQLERRVVFRRAM---KRAVQS 140
A+ IA I + LE+RV ++ K+ +Q
Sbjct: 121 ASSIADFIVEHLEKRVPYKVVFVLLKKHLQR 151
>gi|302748553|gb|ADL63757.1| ribosomal protein S3 [Apium graveolens]
Length = 486
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E + + G+ ++ I+ II+ + +++K+R L N TN+
Sbjct: 313 KVMELIDKFIGLGGIGEL-IKGIEMMLEIILRNRIIPYGYNSYLNEVKKMRSLLFNRTNT 371
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + + M+ G +G+++
Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIAKDIPLVMKKGVEGIRICC 431
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 432 SGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 482
>gi|328541282|gb|AEB21865.1| ribosomal protein S3 [Bazzania intermedia]
Length = 373
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 40/125 (32%), Positives = 66/125 (52%), Gaps = 1/125 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ SN T + + ++ +A+LIAQ I+ +LER+ FR+ + +
Sbjct: 249 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLERKKSFRQICRSIFK 308
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 309 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 368
Query: 199 KVYVS 203
KV+VS
Sbjct: 369 KVWVS 373
>gi|326531446|dbj|BAJ97727.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 230
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 9/178 (5%)
Query: 32 LLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR--- 88
L E + E L L + G A + I T II+ + R ++G+KG I ++
Sbjct: 17 FLAE---LNEMLTRELGEDGFAGVEIRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVV 73
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG 148
+K N + + L +V + A A+S+ +L + RRA ++ M GA G
Sbjct: 74 QKRFNFPDGGVELYAEKVLNRGLCAVAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKG 133
Query: 149 VKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
+VI SG+L A+ ++ + +G + + +ID G GIKV + L
Sbjct: 134 CEVIVSGKLR-AQRAKPMKFKDGYMISSGHPVNQYIDGAVRHVLLRQGVLGIKVKIML 190
>gi|70606406|ref|YP_255276.1| 30S ribosomal protein S3P [Sulfolobus acidocaldarius DSM 639]
gi|76363394|sp|Q4JB46|RS3_SULAC RecName: Full=30S ribosomal protein S3P
gi|68567054|gb|AAY79983.1| 30S ribosomal protein S3P [Sulfolobus acidocaldarius DSM 639]
Length = 231
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 57/187 (30%), Positives = 87/187 (46%), Gaps = 4/187 (2%)
Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN 96
+ + EYL A A + I +T R+I+Y+ RP LIIGK G I+++ + L
Sbjct: 16 VMVDEYLAKQFYNAEYAGVEIVKTPIGTRVIIYAGRPPLIIGKGGKTIKQLAQVLEKFFG 75
Query: 97 -SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155
++V PE+NA ++A +A LE+ FRRA ++ M GA G +VI SG
Sbjct: 76 LENPQITVTAAENPELNARVMAFRLAIALEKGYHFRRAAFITIRRIMSSGAVGAEVIVSG 135
Query: 156 RLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
+L +E ++ E EG V Q L ID +A G G++V ++ D
Sbjct: 136 KLT-SERAKYEKLKEGTVYKSGQQLEKIIDRAIGIAMLKPGVYGVEVVITKPTRSIDKIE 194
Query: 214 TIPAAEH 220
E
Sbjct: 195 LKEKVEK 201
>gi|50291535|ref|XP_448200.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527511|emb|CAG61151.1| unnamed protein product [Candida glabrata]
Length = 247
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 75/186 (40%), Gaps = 13/186 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ L + G + + + T +I+ + R ++G+ G
Sbjct: 13 ADGVFYAEL-------NEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLGENGRR 65
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K I L V ++A A+S+ +L + RRA V+
Sbjct: 66 INELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVRY 125
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A ++ + +G + Q + ID T G GI
Sbjct: 126 VMESGAKGCEVVVSGKLRAA-RAKAMKFADGFLIHSGQPVNDFIDVATRHVLMRQGVLGI 184
Query: 199 KVYVSL 204
KV +
Sbjct: 185 KVKIMR 190
>gi|291498608|gb|ADE08082.1| rps3 [Triticum aestivum]
Length = 561
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 80/173 (46%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + + K+ I + + + G +++K+R LSN T
Sbjct: 377 KVMELIEKFIDLGRIGKL---IKGIEMMIEIILRKRIIPYGYNSYLNEVQKMRSFLSNRT 433
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERR-VVFRRAMKRAVQ---SAMRFGADGVKV 151
N+ + ++ +A+LIAQ I+ QL + FR + V+ M G +G+++
Sbjct: 434 NTNTLIESVKIQSVYQSASLIAQDISFQLRNNPISFRSIFSKIVKDIPLIMPKGVEGIRI 493
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T G G+KV +S
Sbjct: 494 CCSGRLGGAEIARTECGKYGKTSCNVFNQKIDYAPAEVSTRNGISGVKVRISY 546
Score = 41.5 bits (96), Expect = 0.089, Method: Composition-based stats.
Identities = 19/101 (18%), Positives = 36/101 (35%), Gaps = 7/101 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQ------CHLKQAGVAK 54
M +K NPI RL +N + + F+ YG L++D+ +R Y + +
Sbjct: 1 MARKGNPISVRLDLNRSSDPSRFSDYY-YGKSLYQDVNLRSYFSSIRPPTKLALGFRLGR 59
Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95
+I K I + + +K + +
Sbjct: 60 CIILHFPKRTFIHFFLPGRSPRLKRKKDKKSRPVLQEKGWW 100
>gi|223928000|gb|ACN23652.1| ribosomal protein S3 [Halimeda hummii]
Length = 165
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 82/166 (49%), Gaps = 12/166 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L K+ KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKRHYSKYVLEDNFVRTILSEKYKRXKFEKIQISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN--MTNSEIHLSVN-----EVPKPEIN 112
+ I++++ + ++IGKK ++E +K++ +I + + + +
Sbjct: 61 IEDHLEIVIHAQKLDILIGKKSENLEIFQKQIKKFIFQYRQIEWNSKLKVILYIFRCKNT 120
Query: 113 ATLIAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASG 155
A+ IA I + LE+RV ++ K+ +Q + A G+KV +G
Sbjct: 121 ASSIADFIVEHLEKRVPYKVVFGLLKKHLQR-QKHSALGMKVQIAG 165
>gi|330835819|ref|YP_004410547.1| 30S ribosomal protein S3P [Metallosphaera cuprina Ar-4]
gi|329567958|gb|AEB96063.1| 30S ribosomal protein S3P [Metallosphaera cuprina Ar-4]
Length = 239
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 56/195 (28%), Positives = 94/195 (48%), Gaps = 8/195 (4%)
Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN 96
+ + E+L A A I +T R+ +Y+ RP +IIGK G I+++ + L N
Sbjct: 16 VMVDEFLAKEYYNAEYAGSEISKTPMGTRVTIYAGRPAIIIGKDGKTIKRLAQILERYFN 75
Query: 97 -SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155
++V + KPE+NA ++A +A LE+ FRRA ++ M GA G +VI SG
Sbjct: 76 LESPQITVAQPEKPELNARVMAFRLAVTLEKGYHFRRAAFITIRKIMNAGALGAEVIVSG 135
Query: 156 RLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVS 209
++ +E ++ E EG V L +D A+A G G++V ++ D++
Sbjct: 136 KIT-SERAKFEKLKEGIVYKTGNGLDVMVDRAIAIATLKMGIYGVQVVITKPLRTVDKIL 194
Query: 210 DSDSTIPAAEHRVVE 224
+ T +E E
Sbjct: 195 LKEKTETTSESTEAE 209
>gi|328541178|gb|AEB21813.1| ribosomal protein S3 [Arachniopsis major]
Length = 376
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 251 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 310
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNG+E+++TEC G L IDY A T YG G+
Sbjct: 311 RIKKCPYVKGIRIGCSGRLNGSEIAKTECRKCGETSLHVFSDQIDYAKTQASTPYGILGV 370
Query: 199 KVYVSL 204
KV+VS
Sbjct: 371 KVWVSY 376
>gi|302748741|gb|ADL63851.1| ribosomal protein S3 [Floerkea proserpinacoides]
Length = 508
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 48/180 (26%), Positives = 80/180 (44%), Gaps = 9/180 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ G+A+ R I + + G ++ K+R LSN T
Sbjct: 326 KVMELIEKLRNLGGIAE---WRKGIEMMIKIILRNIKIPYGYNSYLKEVIKMRFLLSNRT 382
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRA---VQSAMRFGADGVKV 151
+ + ++ +A+ IAQ I+ QL +R FR + +Q M+ +G+++
Sbjct: 383 KTNALIESVKIEFVYQSASPIAQDISFQLRTKRKSFRSIFSQIVKDIQLVMQKRVEGIRI 442
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
SGRL GAE++RTEC G+ IDY T YG G+KV++S +
Sbjct: 443 CCSGRLEGAEIARTECGKYGKTSRNLFNQKIDYAPVEVSTRYGISGVKVWISYSKKKGGR 502
>gi|302748834|gb|ADL63897.1| ribosomal protein S3 [Lamium sp. Qiu 95019]
Length = 476
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 6/171 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E + + + ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 307 KVMELIDKFIDLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 365
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQL--ERRVVFRRAMKRAVQSAMRFGAD---GVKVI 152
+ ++ +A+ IAQ I+ QL ++ FR + V + G+++
Sbjct: 366 NTLIESVKIQSVYQSASPIAQDISFQLRTKKTRSFRSIFSQIVLNIPLVMKKRVTGIRIC 425
Query: 153 ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGRL GA+++RTEC G++ IDY A T YG G+KV++S
Sbjct: 426 CSGRLKGAKIARTECGKYGKISRNLFNQKIDYAPAEVSTRYGILGVKVWIS 476
>gi|302748595|gb|ADL63778.1| ribosomal protein S3 [Brunellia sp. Lewis 3366]
Length = 489
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 48/168 (28%), Positives = 82/168 (48%), Gaps = 5/168 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 323 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 381
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 382 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 441
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVY 201
SGR GAE++RTEC G+ IDY A T YG G+KV+
Sbjct: 442 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVW 489
>gi|302749055|gb|ADL64007.1| ribosomal protein S3 [Stegolepis sp. Qiu 97132]
Length = 476
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 9/172 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + + K+ I + + + G +++K+R LSN T
Sbjct: 308 KVMELIEKFIDLGRIGKL---IKGIEMMIEIILRKRIIPYGYNSYLNEVQKMRSFLSNRT 364
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRA---MKRAVQSAMRFGADGVKV 151
+ + ++ +A+LIAQ I+ Q FR + + ++ M G +G+++
Sbjct: 365 KTNTLIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIYSKIVKDIRLIMPKGVEGIRI 424
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGRL GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 425 CCSGRLGGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 476
>gi|272716735|gb|ACZ95669.1| ribosomal protein S3 [Cedrus deodara]
Length = 557
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 57/178 (32%), Positives = 84/178 (47%), Gaps = 7/178 (3%)
Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90
LL ++ IR L +L G L+ II+ + R + K+R
Sbjct: 382 NLLGKEKVIR--LVENLISLGGIGGLMRGIGMMIEIILRNRRIPYGYNYYLNEGRKMRSL 439
Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGA 146
LSN TN+ + ++ +A+LIAQ I+ QL R FR + V+ M G
Sbjct: 440 LSNRTNTNTLIGSVKILN-YQSASLIAQDISFQLRDRTRSFRSIFSKIVRDIPLVMPKGV 498
Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
G+++ SGRL GAE++RTEC G+ R IDY +A T YG G+KV++S
Sbjct: 499 RGIRICCSGRLKGAEIARTECREYGKTSCNVFRHKIDYASAKVYTRYGILGVKVWISF 556
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/109 (21%), Positives = 45/109 (41%), Gaps = 7/109 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54
M +K+NPI RL +N + +S WF+ YG L+++D+ +R+Y + +
Sbjct: 1 MARKVNPISVRLNLNRSSDSSWFSDYY-YGKLVYQDVNLRDYFGSIRPPTRKTFGFRLGR 59
Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSV 103
+I K I ++ R + ++G + + I
Sbjct: 60 CIIHHFPKRTFIHLFLPRRPRRLKQRGRSRPGKGRWWAFGKVRSIGFFF 108
>gi|115278625|ref|YP_762482.1| ribosomal protein S3 [Tripsacum dactyloides]
gi|114432116|gb|ABI74665.1| ribosomal protein S3 [Tripsacum dactyloides]
Length = 559
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + + K+ I + + + G +++K+R LSN T
Sbjct: 375 KVMELIEKFIDLGRIGKL---IKGIEMMIEIILRKRIIPYGYNSYLNEVQKMRSFLSNRT 431
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERR-VVFRRA---MKRAVQSAMRFGADGVKV 151
N+ + ++ +A+LIAQ I+ QL + FR + + + M G +G+++
Sbjct: 432 NTNTLIESVKIKSVYQSASLIAQDISFQLRNNPISFRSILSKIVKDIPLIMPKGVEGIRI 491
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T G G+KV +S
Sbjct: 492 CCSGRLGGAEIARTECGKYGKTSCNVFNQKIDYAPAEVSTRNGISGVKVRISY 544
Score = 39.6 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 38/101 (37%), Gaps = 9/101 (8%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQ------CHLKQAGVAK 54
M +K NPI RL +N + + F+ YG L++D+ +R Y + +
Sbjct: 1 MARKGNPISVRLDLNRSSDPSRFSDYY-YGKSLYQDVNLRSYFSSIRPPTRLTFGFRLGR 59
Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95
+I K R ++ P + K D + K
Sbjct: 60 CIILHFPK--RTFIHFFLPRRPLRLKRRDKSRPGKDKGRWW 98
>gi|302748760|gb|ADL63860.1| ribosomal protein S3 [Glaucidium palmatum]
Length = 485
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E + + G+ + I + + + G +++K+R LSN T
Sbjct: 304 KVMELIDKFIDLGGIGE---WIKGIEMMIEIILRKRRIPYGYNSYLNEVKKMRSLLSNRT 360
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS---AMRFGADGVKV 151
N+ + ++ +A+ IAQ I+ Q + FR + V++ M+ G +G+++
Sbjct: 361 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKNMKLVMKKGVEGIRI 420
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 421 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRISY 473
>gi|164429154|ref|XP_956174.2| cytoplasmic ribosomal protein subunit S3 [Neurospora crassa OR74A]
gi|157072430|gb|EAA26938.2| cytoplasmic ribosomal protein subunit S3 [Neurospora crassa OR74A]
Length = 262
Score = 101 bits (251), Expect = 1e-19, Method: Composition-based stats.
Identities = 42/202 (20%), Positives = 80/202 (39%), Gaps = 13/202 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ Q L + G + + + T II+ + ++G++G
Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V ++A +S+ +L + RRA ++
Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q + ID T G GI
Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGI 187
Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220
KV + + +
Sbjct: 188 KVKIMRGSDPEGKSGPQKSLPD 209
>gi|257076565|ref|ZP_05570926.1| 30S ribosomal protein S3P [Ferroplasma acidarmanus fer1]
Length = 228
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 52/212 (24%), Positives = 99/212 (46%), Gaps = 11/212 (5%)
Query: 25 RGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDI 84
+ + L + EYLQ AG + ++RT I +Y RPGL+IG+ G+ I
Sbjct: 9 EKKFVSDNIKK-LLVTEYLQSENDSAGFGGMDMKRTPFGTNITLYVNRPGLVIGRHGSKI 67
Query: 85 EKIRK-KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMR 143
+ + + + V EV ++N +I++ IA LE+ +R+A ++ +
Sbjct: 68 KAMTSILETKYGLESPQIEVKEVENADLNPQVISKKIALSLEKGWNYRKAGNTTLRRIID 127
Query: 144 FGADGVKVIASGRLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVY 201
A GV + G+++G E +RT+ ++ G + + RA + G +VA G+ GI V
Sbjct: 128 QHARGVLIRIGGKISG-ERARTQKFMYGEIKYSGEPARAGVITGYSVAMLKTGAIGIYVR 186
Query: 202 VSLRDEVSDSDST------IPAAEHRVVEKDS 227
+ +D + + IP + + + ++S
Sbjct: 187 LLRQDYHLPDEISINTERKIPVPDKKSMPEES 218
>gi|254372215|ref|ZP_04987706.1| hypothetical protein FTCG_01281 [Francisella tularensis subsp.
novicida GA99-3549]
gi|151569944|gb|EDN35598.1| hypothetical protein FTCG_01281 [Francisella novicida GA99-3549]
Length = 72
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
+ SGRL GAE++R+E +GRVPLQT RA +DY TA A T YG G+KV++ + +
Sbjct: 1 MVSGRLGGAEIARSEWARDGRVPLQTFRADVDYATAEALTTYGVIGVKVWIYKGEILPGQ 60
Query: 212 DSTIPAAEHRVVEKDS 227
AE + +K +
Sbjct: 61 -----IAEKKNNKKGA 71
>gi|302904072|ref|XP_003048997.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729931|gb|EEU43284.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 260
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 43/214 (20%), Positives = 82/214 (38%), Gaps = 18/214 (8%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ Q L + G + + + T II+ + ++G++G
Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V ++A +S+ +L + RRA ++
Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q + ID T G GI
Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGI 187
Query: 199 KVYVSLRDEVSDSDSTIPAAEH-----RVVEKDS 227
KV + + E+ +
Sbjct: 188 KVKIMRGSDPEGKAGPQKTLPDAVTIIEPKEEQA 221
>gi|302748907|gb|ADL63933.1| ribosomal protein S3 [Nuphar sp. Qiu M114]
Length = 482
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 51/196 (26%), Positives = 80/196 (40%), Gaps = 22/196 (11%)
Query: 30 GALLHED----------LKIREYLQCHLKQAGVAKI----LIERTHKNCR--IIVYSARP 73
L ED +K+R + + K I K I +
Sbjct: 287 SNNLIEDAREQLLGQLRIKLRNLMDKEKVMELIDKFIDLGGIGELIKGIEMMIEIILRNR 346
Query: 74 GLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-F 130
+ G +++K+R LSN TN+ + ++ +A+ IAQ I+ Q + F
Sbjct: 347 RIPYGYNSYLNEVQKMRSLLSNRTNTNTLMESVKIKSVYQSASPIAQDISFQPRNKTRSF 406
Query: 131 RRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTA 187
R + V+ M G +G+++ SGR GAE++RTEC G+ IDY A
Sbjct: 407 RSIFSQIVKDIPLVMPKGVEGIRISCSGRSKGAEIARTECGKYGKTSCNVFHQKIDYAPA 466
Query: 188 VAETAYGSCGIKVYVS 203
T YG G+KV +S
Sbjct: 467 EVSTRYGISGVKVRIS 482
>gi|223927398|gb|ACN23321.1| ribosomal protein S3 [Halimeda micronesica]
Length = 162
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 22/153 (14%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R LQ +AG KI I R
Sbjct: 1 MGQKVHPLGFRLGITQLHLSQWYASKKYYSKYVLEDHFLRTILQKQYAKAGFEKIEISRK 60
Query: 61 HKNC-RIIVYSARPGLIIGKKGTD---IEKIRKKLSNMTNSEIHLSVNEVPKPEIN---- 112
+N I++++ +P ++IGKKG I+K + + + + E +
Sbjct: 61 IENHLEIVIHAQKPAVLIGKKGPPEGLQNVIKKLIFKYRGRSLSKNSFDKNNYEADLKRL 120
Query: 113 --------------ATLIAQSIAQQLERRVVFR 131
A+ IA I LE+RV ++
Sbjct: 121 KVVLYVIKSKTNASASSIADFIIGNLEKRVPYK 153
>gi|328541264|gb|AEB21856.1| ribosomal protein S3 [Psiloclada clandestina]
Length = 375
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369
Query: 199 KVYVSL 204
KV+VS
Sbjct: 370 KVWVSY 375
>gi|302748535|gb|ADL63748.1| ribosomal protein S3 [Amborella trichopoda]
Length = 487
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 49/195 (25%), Positives = 85/195 (43%), Gaps = 21/195 (10%)
Query: 30 GALLHED----------LKIR------EYLQCHLKQAGVAKILIERTHKNCRIIVYSARP 73
L ED +K+R E+++ + + ++ I+ II+ + +
Sbjct: 288 SNNLIEDAREQLLGKLRIKLRNLMGKVEFIEKLIDLGRIGEL-IKGIEMMIEIILRNRKI 346
Query: 74 GLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRR 132
+++K+R LSN + + ++ +A+ IAQ I+ Q + FR
Sbjct: 347 PYGYNSYLNEVQKMRSFLSNKKKTHTIIESVKIKSVYQSASPIAQDISFQPRNKTRSFRS 406
Query: 133 AMKRA---VQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189
+ +Q M G +G+++ SGRL GAE++RTEC G+ IDY A
Sbjct: 407 IFSQIVKDIQLVMPKGVEGIRICCSGRLKGAEIARTECGKYGKTSRNVFHQKIDYAPAEV 466
Query: 190 ETAYGSCGIKVYVSL 204
T YG G+KV +S
Sbjct: 467 ATRYGISGVKVRISY 481
>gi|58699233|ref|ZP_00374035.1| Ribosomal protein S3, C-terminal domain [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58534249|gb|EAL58446.1| Ribosomal protein S3, C-terminal domain [Wolbachia endosymbiont of
Drosophila ananassae]
Length = 63
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 37/62 (59%), Positives = 46/62 (74%)
Query: 144 FGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
GA G+KV SGRL GAE++RTE Y EGR+PL TLRA+IDY A A+T YG G+KV+V
Sbjct: 1 MGARGIKVSCSGRLGGAEIARTEWYKEGRLPLHTLRANIDYAFAEAKTIYGIIGVKVWVY 60
Query: 204 LR 205
+
Sbjct: 61 IG 62
>gi|328541294|gb|AEB21871.1| ribosomal protein S3 [Neogrollea notabilis]
Length = 375
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369
Query: 199 KVYVSL 204
KV+VS
Sbjct: 370 KVWVSY 375
>gi|293333308|ref|NP_001169131.1| hypothetical protein LOC100382976 [Zea mays]
gi|223975097|gb|ACN31736.1| unknown [Zea mays]
Length = 266
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 42/202 (20%), Positives = 78/202 (38%), Gaps = 13/202 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ Q L + G + + + T II+ + ++G+ G
Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGENGRR 68
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V ++A +S+ +L + RRA ++
Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q + ID T G GI
Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGI 187
Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220
KV + +
Sbjct: 188 KVKIMRGSDPEGKSGPQKTLPD 209
>gi|328541240|gb|AEB21844.1| ribosomal protein S3 [Telaranea chaetocarpa]
Length = 383
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ +EK++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 258 RYYYLEKMQSLFSDQTKTNTLIWPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 317
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 318 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYARTQASTPYGILGV 377
Query: 199 KVYVSL 204
KV+VS
Sbjct: 378 KVWVSY 383
>gi|302749107|gb|ADL64033.1| ribosomal protein S3 [Vahlia capensis]
Length = 495
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
++ E ++ + + ++ I+ II+ + R +++K+R LSN T +
Sbjct: 322 RVMELIEKFIDLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTKT 380
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q +R FR + V+ M+ G +G+++
Sbjct: 381 NTLIESVKIKSVYQSASPIAQDISFQPRNKRRSFRSIFSQIVKDIPLVMKKGVEGIRICC 440
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 441 SGRLAGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 491
>gi|302748569|gb|ADL63765.1| ribosomal protein S3 [Basella alba]
Length = 493
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 49/168 (29%), Positives = 86/168 (51%), Gaps = 5/168 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ + ++ + G+ + LI+ II+ + R +++K+R LSN T +
Sbjct: 327 KVMKLIEKFIYLGGI-RELIKGIEMMIEIILKNRRIPYGYNSYLNEVKKMRAFLSNRTKT 385
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAM---KRAVQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + +R FR+ + + S M+ G +G+++
Sbjct: 386 NTLIKSKKIKSVYQSASTIAQDISFQPKNKRRSFRKIFSILVKNIPSVMKKGVEGIRISC 445
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVY 201
SGRL GAE++RTEC G+ L IDY +A T YG G+KV+
Sbjct: 446 SGRLEGAEIARTECRKYGKTSCNVLDQKIDYASAEVSTRYGILGVKVW 493
>gi|272716560|gb|ACZ95570.1| ribosomal protein S3 [Cephalotaxus sinensis]
Length = 763
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 44/149 (29%), Positives = 67/149 (44%), Gaps = 6/149 (4%)
Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + + G ++ K+R LS TN+ + ++ +A+ IAQ I
Sbjct: 615 GMMIGILPKNRRIPYGYNYYLNEVRKMRSLLSGGTNANTSIGSVKIESVYQSASSIAQDI 674
Query: 121 AQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
+ QL FR + V+ M G G+++ SGRL GAE++RTEC G+
Sbjct: 675 SFQLRDGTRSFRSIFGQIVRDIPLVMPKGVGGIRICCSGRLKGAEIARTECREYGKTSCN 734
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
R IDY A T YG G+KV++
Sbjct: 735 AFRHQIDYAYAKVSTRYGILGVKVWIPFP 763
>gi|328541208|gb|AEB21828.1| ribosomal protein S3 [Kurzia trichoclados]
Length = 375
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFR 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369
Query: 199 KVYVSL 204
KV+V+
Sbjct: 370 KVWVTY 375
>gi|302748931|gb|ADL63945.1| ribosomal protein S3 [Parnassia grandifolia]
Length = 488
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 84/171 (49%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + + +++K+R LSN TN+
Sbjct: 318 KVMELIEKFINLGGIGEL-IKGIEMMIEIILINRKIPYGYNFYLNEVQKMRSLLSNRTNT 376
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 377 NTFIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKDIPLVMKKGVEGIRICC 436
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 437 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 487
>gi|302749017|gb|ADL63988.1| ribosomal protein S3 [Saruma henryi]
Length = 486
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 9/172 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ + I + + G +++K+R LSN T
Sbjct: 318 KVMELIEKFIDLGGIGEF---LKGIEMMIEIILKNRRIPYGYNSYLNEVQKMRSLLSNRT 374
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ Q + FR + V+ M G +G+++
Sbjct: 375 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIPLVMPKGVEGIRI 434
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 435 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAFAEVSTRYGISGVKVRIS 486
>gi|255942573|ref|XP_002562055.1| Pc18g02110 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586788|emb|CAP94435.1| Pc18g02110 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 264
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 46/208 (22%), Positives = 83/208 (39%), Gaps = 18/208 (8%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ Q L + G + + + T IIV + ++G++G
Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIVRATHTQEVLGEQGRR 68
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V ++A +S+ +L + RRA ++
Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q + ID T G GI
Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGI 187
Query: 199 KVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
KV + SD A + +
Sbjct: 188 KVKIMRG-----SDPEGKAGPQKTLPDS 210
>gi|328541272|gb|AEB21860.1| ribosomal protein S3 [Paracromastigum macrostipum]
gi|328541274|gb|AEB21861.1| ribosomal protein S3 [Hyalolepidozia microphylla]
Length = 375
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369
Query: 199 KVYVSL 204
KV+VS
Sbjct: 370 KVWVSY 375
>gi|328541198|gb|AEB21823.1| ribosomal protein S3 [Kurzia hippuroides]
Length = 375
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 67/126 (53%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFR 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T+YG G+
Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTSYGILGV 369
Query: 199 KVYVSL 204
KV+VS
Sbjct: 370 KVWVSY 375
>gi|302748565|gb|ADL63763.1| ribosomal protein S3 [Austrobaileya scandens]
Length = 489
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 320 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVQKMRSVLSNRTNT 378
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + + + M G +G+++
Sbjct: 379 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSILSQIVKDIPLVMPKGVEGIRICC 438
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 439 SGRSEGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGISGVKVRISY 489
>gi|320592132|gb|EFX04571.1| 40S ribosomal protein s3 [Grosmannia clavigera kw1407]
Length = 264
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 45/203 (22%), Positives = 82/203 (40%), Gaps = 18/203 (8%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ Q L + G + + + T II+ + ++G++G
Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V ++A +S+ +L + RRA ++
Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q + ID T G GI
Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGI 187
Query: 199 KVYVSLRDEVSDSDSTIPAAEHR 221
KV + SD A +
Sbjct: 188 KVKIMRG-----SDPDGKAGPQK 205
>gi|328541306|gb|AEB21877.1| ribosomal protein S3 [Telaranea palmata]
Length = 375
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369
Query: 199 KVYVSL 204
KV+VS
Sbjct: 370 KVWVSY 375
>gi|302749051|gb|ADL64005.1| ribosomal protein S3 [Staphylea trifolia]
Length = 475
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/169 (27%), Positives = 79/169 (46%), Gaps = 9/169 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ I + + G +++K+R LSN T
Sbjct: 310 KVMELIEKFIDLGGIGEL---IKGIEMMIEIILRNRIIPYGYNSYLNEVKKMRSLLSNRT 366
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151
+ + ++ +A+ IAQ I+ QL +R FR + V+ M+ G +G+++
Sbjct: 367 KTNTLIESVKIKSVYQSASPIAQDISFQLRNKRRSFRSIFSKIVKDIPLVMKKGVEGIRI 426
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200
SGRL GAE++RTEC G+ IDY A T YG G+KV
Sbjct: 427 CCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKV 475
>gi|289618451|emb|CBI55175.1| unnamed protein product [Sordaria macrospora]
Length = 262
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 42/202 (20%), Positives = 79/202 (39%), Gaps = 13/202 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ Q L + G + + + T II+ + ++G++G
Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V ++A +S+ +L + RRA ++
Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q + ID T G GI
Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGI 187
Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220
KV + +
Sbjct: 188 KVKIMRGSDPEGKSGPQKTLPD 209
>gi|297619583|ref|YP_003707688.1| ribosomal protein S3 [Methanococcus voltae A3]
gi|297378560|gb|ADI36715.1| ribosomal protein S3 [Methanococcus voltae A3]
Length = 218
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 51/186 (27%), Positives = 95/186 (51%), Gaps = 4/186 (2%)
Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-S 97
I EY L +AG + I +++T RI V++ +PG +IG+KG ++++ + L +
Sbjct: 16 INEYFCKKLVKAGYSHIDVKKTPIGTRITVFAEKPGFVIGRKGKMVKELTETLRTVYKIE 75
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ V ++ +++ ++ IA LE+ + FR+ AV+ M GA GV +I SG+L
Sbjct: 76 NPQIEVKQIENADLDPAVVGHKIAASLEKGMHFRKTAHSAVRRVMNAGAKGVSIIVSGKL 135
Query: 158 NGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
+G E SRTE +++G + + + +A+ G G+ V + L D + I
Sbjct: 136 SG-ERSRTEKFMDGYMKHCGEPSEELVMKSHQLAKLKLGVVGVTVKIMLPDVSLPDEIVI 194
Query: 216 PAAEHR 221
+ E +
Sbjct: 195 TSGEIK 200
>gi|302748585|gb|ADL63773.1| ribosomal protein S3 [Borago officinalis]
Length = 458
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 48/178 (26%), Positives = 83/178 (46%), Gaps = 5/178 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ G+ LI+ II+ + R +++K+R LSN T++
Sbjct: 277 KVMELIEK-FIDLGMKGELIKGIEMMVEIILRNRRIPYGYNSYLNEVQKMRSLLSNKTST 335
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V++ M+ G +G+++
Sbjct: 336 NTLIKSVKINSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKNIPLVMKKGVEGIRICC 395
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
SGR GAE++RTEC G+ IDY A T YG G+KV++S +
Sbjct: 396 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISYSKKKGGR 453
>gi|288191287|gb|ADC43996.1| ribosomal protein S3 [Parnassia grandifolia]
Length = 505
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 84/171 (49%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + + +++K+R LSN TN+
Sbjct: 330 KVMELIEKFINLGGIGEL-IKGIEMMIEIILINRKIPYGYNFYLNEVQKMRSLLSNRTNT 388
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 389 NTFIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKDIPLVMKKGVEGIRICC 448
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 449 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 499
>gi|302749035|gb|ADL63997.1| ribosomal protein S3 [Smilax sp. Qiu 95117]
Length = 470
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 49/170 (28%), Positives = 80/170 (47%), Gaps = 5/170 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E + + G+ ++ I+ II+ + R +++K+R LSN T +
Sbjct: 302 KVMELIDKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVQKMRSFLSNRTKT 360
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+LIAQ I+ Q FR + V+ M G +G+++
Sbjct: 361 NTLIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSKIVKDIPFIMPKGVEGIRICC 420
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGRL GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 421 SGRLGGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 470
>gi|223928075|gb|ACN23702.1| ribosomal protein S3 [Halimeda tuna]
Length = 154
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 42/151 (27%), Positives = 75/151 (49%), Gaps = 11/151 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A Y + ED +R L K+A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKRHYSKYVLEDNFVRTILSEKYKRAKFEKIQISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN--MTNSEIHLSVN-----EVPKPEIN 112
+ I++++ +P + IGKK ++E +K++ +I + + + +
Sbjct: 61 IEDHLEIVIHAQKPDIXIGKKSENLEVFQKQIKKFIFQYRQIEWNSKLKVILYIFRCKNT 120
Query: 113 ATLIAQSIAQQLERRVVFRRAM---KRAVQS 140
A+ IA I + LE+RV ++ K+ +Q
Sbjct: 121 ASSIADFIVEHLEKRVPYKVVFVLLKKHLQR 151
>gi|212527956|ref|XP_002144135.1| 40S ribosomal protein S3, putative [Penicillium marneffei ATCC
18224]
gi|210073533|gb|EEA27620.1| 40S ribosomal protein S3, putative [Penicillium marneffei ATCC
18224]
Length = 266
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 42/202 (20%), Positives = 79/202 (39%), Gaps = 13/202 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ Q L + G + + + T II+ + ++G++G
Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V ++A +S+ +L + RRA ++
Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q + ID T G GI
Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGI 187
Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220
KV + +
Sbjct: 188 KVKIMRGSDPEGKSGPQKTLPD 209
>gi|302748603|gb|ADL63782.1| ribosomal protein S3 [Cabomba sp. Qiu 97027]
Length = 473
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 9/171 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ R + + + G +++K+R LSN T
Sbjct: 307 KVMELIEKFIDLGGIGEL---RKGIEMILEIILRNRRIPYGYNSYLNEVQKMRSLLSNRT 363
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRA---MKRAVQSAMRFGADGVKVI 152
N+ + ++ +A+ IAQ I+ Q R FR + + + M G +G+++
Sbjct: 364 NTNTLMESVKIKSVYQSASPIAQDISFQPRSRS-FRSILSQIVKDIPLVMPKGVEGIRIS 422
Query: 153 ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 423 CSGRSKGAEIARTECGKYGKTSCNVFHQKIDYAPAEVSTRYGISGVKVRIS 473
>gi|6324151|ref|NP_014221.1| Rps3p [Saccharomyces cerevisiae S288c]
gi|1173255|sp|P05750|RS3_YEAST RecName: Full=40S ribosomal protein S3; AltName: Full=RP13;
AltName: Full=YS3
gi|313103665|pdb|3IZB|B Chain B, Localization Of The Small Subunit Ribosomal Proteins Into
A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae
Translating 80s Ribosome
gi|315113450|pdb|3O2Z|C Chain C, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit
Of The First 80s In The Asymmetric Unit.
gi|315113478|pdb|3O30|C Chain C, Yeast 80s Ribosome. This Entry Consists Of The 40s Subunit
Of The Second 80s In The Asymmetric Unit.
gi|457164|dbj|BAA04973.1| ribosomal protein YS3 [Saccharomyces cerevisiae]
gi|1302158|emb|CAA96070.1| RPS3 [Saccharomyces cerevisiae]
gi|1463121|gb|AAC49380.1| ribosomal protein S3 [Saccharomyces cerevisiae]
gi|151944361|gb|EDN62639.1| ribosomal protein S3 [Saccharomyces cerevisiae YJM789]
gi|190409159|gb|EDV12424.1| ribosomal protein S3 [Saccharomyces cerevisiae RM11-1a]
gi|207341817|gb|EDZ69765.1| YNL178Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270755|gb|EEU05916.1| Rps3p [Saccharomyces cerevisiae JAY291]
gi|259149181|emb|CAY82423.1| Rps3p [Saccharomyces cerevisiae EC1118]
gi|285814479|tpg|DAA10373.1| TPA: Rps3p [Saccharomyces cerevisiae S288c]
gi|323331906|gb|EGA73318.1| Rps3p [Saccharomyces cerevisiae AWRI796]
gi|323335912|gb|EGA77190.1| Rps3p [Saccharomyces cerevisiae Vin13]
gi|323346843|gb|EGA81122.1| Rps3p [Saccharomyces cerevisiae Lalvin QA23]
gi|323352903|gb|EGA85205.1| Rps3p [Saccharomyces cerevisiae VL3]
Length = 240
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/213 (22%), Positives = 82/213 (38%), Gaps = 21/213 (9%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ L + G + + + T +I+ + R ++G+ G
Sbjct: 13 ADGVFYAEL-------NEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLGENGRR 65
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K I L V ++A A+S+ +L + RRA V+
Sbjct: 66 INELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVRY 125
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A ++ + +G + Q + ID T G GI
Sbjct: 126 VMESGAKGCEVVVSGKLRAA-RAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQGVLGI 184
Query: 199 KVYVSL--------RDEVSDSDSTIPAAEHRVV 223
KV + + D+ + I E +
Sbjct: 185 KVKIMRDPAKSRTGPKALPDAVTIIEPKEEEPI 217
>gi|302748649|gb|ADL63805.1| ribosomal protein S3 [Cinnamodendron ekmanii]
Length = 487
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + R +++KIR LSN TN+
Sbjct: 310 KVMELIEKFIDLGRIGEL-IKGIEMMIEIILKNRRIPYGYNSYLNEVQKIRSLLSNRTNT 368
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M G +G+++
Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMPKGVEGIRICC 428
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 429 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRISY 479
>gi|272716552|gb|ACZ95564.1| ribosomal protein S3 [Torreya californica]
Length = 802
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 44/149 (29%), Positives = 66/149 (44%), Gaps = 6/149 (4%)
Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + + G ++ K+R LS TN+ + ++ +A+ IAQ I
Sbjct: 654 GMMIGIIPKNRRIPYGYNYYLNEVRKMRSLLSGGTNANTSIGSVKIESVYQSASPIAQDI 713
Query: 121 AQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
+ QL FR R V+ M G G+++ GRL GAE++RTEC G+
Sbjct: 714 SSQLRDGTRSFRSIFGRIVRDIPLVMPKGVGGIRICCPGRLKGAEIARTECREYGKTSCN 773
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
R IDY A T YG G+KV++
Sbjct: 774 AFRHQIDYAYAKVSTRYGILGVKVWIPFP 802
>gi|328541262|gb|AEB21855.1| ribosomal protein S3 [Acromastigum adaptatum]
Length = 375
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ SN T + + ++ +A+LIAQ I+ +LER+ FR+ + +
Sbjct: 250 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLERKKSFRQICRSIFK 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYRKCGETSLHVFSDQIDYAKTQASTPYGILGV 369
Query: 199 KVYVSL 204
KV+VS
Sbjct: 370 KVWVSY 375
>gi|328541214|gb|AEB21831.1| ribosomal protein S3 [Chloranthelia berggrenii]
Length = 373
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 65/125 (52%), Gaps = 1/125 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ + K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 249 RYYYLRKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFR 308
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 309 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 368
Query: 199 KVYVS 203
KV+VS
Sbjct: 369 KVWVS 373
>gi|302748838|gb|ADL63899.1| ribosomal protein S3 [Laurus nobilis]
Length = 483
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E + + G+ ++ I+ II+ + R +++KIR LSN TN+
Sbjct: 314 KVMELIDKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKIRSLLSNRTNT 372
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + ++ M G +G+++
Sbjct: 373 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIKLVMPKGVEGIRICC 432
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 433 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRISY 483
>gi|328541296|gb|AEB21872.1| ribosomal protein S3 [Telaranea wallichiana]
Length = 375
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFR 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369
Query: 199 KVYVSL 204
KV+V
Sbjct: 370 KVWVXY 375
>gi|302695173|ref|XP_003037265.1| hypothetical protein SCHCODRAFT_84144 [Schizophyllum commune H4-8]
gi|300110962|gb|EFJ02363.1| hypothetical protein SCHCODRAFT_84144 [Schizophyllum commune H4-8]
Length = 266
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 75/183 (40%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
++ L + G + + TH II+ + ++G+KG I ++ +K +
Sbjct: 23 DFFTRELAEEGYSGCDVRVTHARTEIIIRATHTQEVLGEKGRRIRELTSLVQKRFKFPEN 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V ++A +S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
A +++ + +G + Q +R +D+ G GIKV + V
Sbjct: 143 RAA-RAKSMKFTDGFMIHSGQPVRDFVDFAVRHVLLRQGVLGIKVKIMKGWDPEGLVGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|302748923|gb|ADL63941.1| ribosomal protein S3 [Orontium aquaticum]
Length = 477
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 9/172 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
KI E ++ + G+ ++ I + + G +++K+R LSN T
Sbjct: 309 KIMELIEKFIDLGGIGELNKGI---EMMIEIILRNRRIPYGYNSYLNEVQKMRSFLSNRT 365
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRA---MKRAVQSAMRFGADGVKV 151
++ + ++ +A+ IAQ I+ Q +R+ FR + + + M G +G+++
Sbjct: 366 HTNTLIESVKIKSVYQSASPIAQDISFQPRNKRISFRSIFSHIVKDIPLIMPKGVEGIRI 425
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 426 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 477
>gi|302748693|gb|ADL63827.1| ribosomal protein S3 [Decaisnea fargesii]
Length = 478
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/170 (27%), Positives = 83/170 (48%), Gaps = 5/170 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E+++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 310 KVMEFIEKLIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 368
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ + + FR + +Q M G +G+++
Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISLKPRNKTRAFRSIFSKIVKDIQFVMPKGVEGIRICC 428
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RTEC G+ IDY +A T YG G+KV +S
Sbjct: 429 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYASAEVSTRYGISGVKVRIS 478
>gi|302748804|gb|ADL63882.1| ribosomal protein S3 [Hypecoum imberbe]
Length = 504
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 48/178 (26%), Positives = 85/178 (47%), Gaps = 5/178 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ ++ G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 323 KVMELIEKFIELGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 381
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q +R FR + V+ M G +G+++
Sbjct: 382 NTLIESVKIQSVYQSASPIAQDISFQPRNKRRSFRSIFSQIVKDIPLYMPKGVEGIRICC 441
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
SGR GAE++RTEC G+ +DY A T YG G+KV +S ++
Sbjct: 442 SGRSEGAEIARTECGKYGKTSRNVFNQKMDYAPAEVSTRYGISGVKVRISYSQKMKGR 499
>gi|328541202|gb|AEB21825.1| ribosomal protein S3 [Kurzia gonyotricha]
Length = 374
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 1/125 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFR 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369
Query: 199 KVYVS 203
KV+VS
Sbjct: 370 KVWVS 374
>gi|288191231|gb|ADC43968.1| ribosomal protein S3 [Touroulia guianensis]
Length = 473
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 44/173 (25%), Positives = 82/173 (47%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ I + + + G +++K+R LSN T
Sbjct: 301 KVMELIEKFINLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLKEMKKMRSLLSNRT 357
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM----KRAVQSAMRFGADGVKV 151
+ + ++ +A+ IAQ I+ QL + R++ + + M+ G +G+++
Sbjct: 358 KTNTLIESVKIQSVYQSASPIAQDISFQLRNKKRSLRSILSQIVKDIPLVMKKGVEGIRI 417
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G++ IDY A T YG G+KV++S
Sbjct: 418 CCSGRSEGAEIARTECGKYGKISRNVFNQKIDYAPAEVSTRYGISGVKVWISY 470
>gi|328541220|gb|AEB21834.1| ribosomal protein S3 [Hygrolembidium rigidum]
Length = 373
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 1/124 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ + K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLRKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFR 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369
Query: 199 KVYV 202
KV+V
Sbjct: 370 KVWV 373
>gi|56181039|gb|AAV83638.1| ribosomal protein S3 [Halimeda tuna]
Length = 181
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILI-ER 59
MGQK++P+ FR+G+ S+W+A Y + ED IR L K+A +KI I +
Sbjct: 1 MGQKVHPLGFRVGITQPHLSQWYASKRYYSQYVLEDNFIRTILLKKYKRANFSKIHISRK 60
Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATL---- 115
T + I++++ G++IG + + + + +I + + E N+ L
Sbjct: 61 TDDHFEIVIHAQNLGILIGT--KSEKSEKSEKFKLFQKQIKEFIFHYRQSEWNSKLRVVL 118
Query: 116 -----------IAQSIAQQLERRVVFRRAMK 135
IA I + LERRV ++
Sbjct: 119 HIFRCKTSASSIADFIVEHLERRVPYKVVFN 149
>gi|302748965|gb|ADL63962.1| ribosomal protein S3 [Platanus occidentalis]
Length = 483
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 5/170 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 315 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 373
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M G +G+++
Sbjct: 374 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIPLVMPKGVEGIRICC 433
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 434 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 483
>gi|302348032|ref|YP_003815670.1| 30S ribosomal protein S3P [Acidilobus saccharovorans 345-15]
gi|302328444|gb|ADL18639.1| 30S ribosomal protein S3P [Acidilobus saccharovorans 345-15]
Length = 238
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 52/190 (27%), Positives = 93/190 (48%), Gaps = 4/190 (2%)
Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN 96
+K+ EYL + AG A + I ++ R+ +++ RP L+IG++G I K++ L +
Sbjct: 16 VKVDEYLAQNFYTAGYAGVQIVQSGLGTRVHIFAERPALVIGRRGATIRKLQAVLEKVFG 75
Query: 97 SE-IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155
E + ++V++ E+NA + A IA+ LE FRR ++ M GA GV+++ SG
Sbjct: 76 LEGVQVTVSQPDNMELNARVQAFRIARALEMGYHFRRVAMATMRRIMEAGAVGVEIVISG 135
Query: 156 RLNGAELSRTECYLEGRVPLQTLRAHI--DYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
+L+ E +R E G+V + D A A+ G G++V + +
Sbjct: 136 KLSR-ERARFEKLQAGKVIKTGNVVDVYTDRAIAYAKLPLGIIGVEVRIIRPEAARPDIL 194
Query: 214 TIPAAEHRVV 223
P +E +
Sbjct: 195 LRPDSEAAAI 204
>gi|328541308|gb|AEB21878.1| ribosomal protein S3 [Telaranea patentissima]
Length = 375
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369
Query: 199 KVYVSL 204
KV+V
Sbjct: 370 KVWVXY 375
>gi|302748895|gb|ADL63927.1| ribosomal protein S3 [Nandina domestica]
Length = 479
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 45/172 (26%), Positives = 80/172 (46%), Gaps = 9/172 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ I + + + G +++K+R LSN T
Sbjct: 311 KVMELIEKFIDLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEVKKMRSLLSNRT 367
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKV 151
N+ + ++ +A+ IAQ I+ Q + FR + ++ M+ G +G+++
Sbjct: 368 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIKLVMQKGVEGIRI 427
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 428 CCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 479
>gi|223927744|gb|ACN23484.1| ribosomal protein S3 [Halimeda cuneata]
Length = 143
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A +Y + ED +R L K+A KI I
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKRDYSKYVLEDNXVRTLLSKKYKRAKXEKIHIXXX 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN-------MTNSEIHLSVNEVPKPEIN 112
+ I++++ +P ++ GKK + ++++ + + + + +I
Sbjct: 61 IEDHLEIVIHAQKPXILXGKKXEXXQTFQQQIKKAIFQYRQIXWNSXXKVIFYIFXXKIX 120
Query: 113 ATLIAQSIAQQLERRVV 129
A+ IA I + LE+RV
Sbjct: 121 ASSIADFIVEHLEKRVP 137
>gi|156840842|ref|XP_001643799.1| hypothetical protein Kpol_480p28 [Vanderwaltozyma polyspora DSM
70294]
gi|156114424|gb|EDO15941.1| hypothetical protein Kpol_480p28 [Vanderwaltozyma polyspora DSM
70294]
Length = 234
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 48/211 (22%), Positives = 81/211 (38%), Gaps = 16/211 (7%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ L + G + + + T II+ + R ++G+ G
Sbjct: 13 ADGVFYAEL-------NEFFTRELAEEGYSGVEVRVTPTKTEIIIRATRTQDVLGENGRR 65
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K I L V ++A A+S+ +L + RRA V+
Sbjct: 66 INELTLLVQKRFKFKPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVRY 125
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A ++ + +G + Q + ID T G GI
Sbjct: 126 VMESGAKGCEVVVSGKLRAA-RAKAMKFADGFLIHSGQPVNDFIDVATRHVLMRQGVLGI 184
Query: 199 KVYVSL---RDEVSDSDSTIPAAEHRVVEKD 226
KV + R +V E++
Sbjct: 185 KVKIMRDPARSKVGPRALPDAVTIVEPKEEE 215
>gi|302748699|gb|ADL63830.1| ribosomal protein S3 [Dicentra sp. Qiu 95026]
Length = 478
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 5/170 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E + ++ G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 310 KVMELIDKFIELGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYFNEVKKMRSLLSNRTNT 368
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M G +G+++
Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMPKGVEGIRICC 428
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 429 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 478
>gi|302748689|gb|ADL63825.1| ribosomal protein S3 [Daphnandra micrantha]
Length = 478
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 5/170 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++KIR LSN TN+
Sbjct: 310 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVQKIRSLLSNRTNT 368
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M G +G+++
Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIPIVMPKGVEGIRICC 428
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 429 SGRSEGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGISGVKVRIS 478
>gi|302748871|gb|ADL63915.1| ribosomal protein S3 [Melianthus major]
Length = 493
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ I + + G +++K+R LSN T
Sbjct: 321 KVMELIEKFIDLGGIGEL---IKGIEMMIEIILRNRIIPYGYNYYLNEVKKMRSLLSNRT 377
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQ---SAMRFGADGVKV 151
N+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++
Sbjct: 378 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKYIPLVMKKGVEGIRI 437
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 438 CCSGRSKGAEIARTECGKYGKTSSNVFYNKIDYAPAEVSTRYGISGVKVWISY 490
>gi|328541292|gb|AEB21870.1| ribosomal protein S3 [Paracromastigum drucei]
Length = 375
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGISGV 369
Query: 199 KVYVSL 204
KV+VS
Sbjct: 370 KVWVSY 375
>gi|302748721|gb|ADL63841.1| ribosomal protein S3 [Elaeagnus sp. Qiu 95028]
Length = 437
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 13/179 (7%)
Query: 34 HEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN 93
ED K+ E ++ + G+ ++ I + R +++K+R LSN
Sbjct: 255 KED-KVMELIEKFIDLGGIGEL---IKGIEMMIEIILRRIPYGYNSYLNEVKKMRSLLSN 310
Query: 94 MTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV---FRRAMKRAVQSAMRFGADG-- 148
TN+ + ++ +A+ IAQ I+ QL R FR + V+ G
Sbjct: 311 RTNTNTLIESVKIKSVYQSASPIAQDISFQLRMRNKTRSFRSIFSKIVKDIPLVMKKGVV 370
Query: 149 --VKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+++ SGR GAE++RTEC G+ IDY A T YG G+KV++S +
Sbjct: 371 SGIRICCSGRSEGAEIARTECGKYGKTS--VFNQKIDYAPAEVSTRYGISGVKVWISYK 427
>gi|255711614|ref|XP_002552090.1| KLTH0B06974p [Lachancea thermotolerans]
gi|238933468|emb|CAR21652.1| KLTH0B06974p [Lachancea thermotolerans]
Length = 248
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/211 (22%), Positives = 82/211 (38%), Gaps = 16/211 (7%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ L + G + + + T +I+ + R ++G+ G
Sbjct: 13 ADGVFYAEL-------NEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLGENGRR 65
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K I L V ++A A+S+ +L + RRA V+
Sbjct: 66 INELTLLVQKRFKYQAGSIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVRY 125
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q + ID T G GI
Sbjct: 126 VMESGAKGCEVVISGKLRAA-RAKSMKFADGFLIHSGQPVADFIDTATRHVLLRQGVLGI 184
Query: 199 KVYVSL---RDEVSDSDSTIPAAEHRVVEKD 226
KV + R+ V E++
Sbjct: 185 KVKIMRDPARNRVGPKALPDAVKILEPKEEE 215
>gi|328541238|gb|AEB21843.1| ribosomal protein S3 [Pseudocephalozia paludicola]
Length = 375
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISCKLEQKKSFRQICRSIFR 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369
Query: 199 KVYVSL 204
KV+VS
Sbjct: 370 KVWVSY 375
>gi|313103630|pdb|3IZ6|B Chain B, Localization Of The Small Subunit Ribosomal Proteins Into
A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s
Ribosome
gi|22204124|gb|AAM92710.1| putative 40S ribosomal protein S3 [Triticum aestivum]
Length = 227
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 42/196 (21%), Positives = 84/196 (42%), Gaps = 10/196 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E L L + G + + + T II+ + R ++G+KG I ++ + N +
Sbjct: 23 EMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFLEN 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L
Sbjct: 83 GVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL----RDEVSDS 211
A+ +++ + +G + Q + +ID G GIKV + L + ++ +
Sbjct: 143 R-AQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLGPT 201
Query: 212 DSTIPAAEHRVVEKDS 227
++++
Sbjct: 202 TPLPDLVTIHPPKEEN 217
>gi|242050848|ref|XP_002463168.1| hypothetical protein SORBIDRAFT_02g038990 [Sorghum bicolor]
gi|241926545|gb|EER99689.1| hypothetical protein SORBIDRAFT_02g038990 [Sorghum bicolor]
Length = 232
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 6/169 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E L L + G + + + T II+ + R ++G+KG I ++ + N
Sbjct: 25 EMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPEG 84
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L
Sbjct: 85 GVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKL 144
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
A+ +++ + +G + + +ID G GIKV + L
Sbjct: 145 R-AQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKVKIML 192
>gi|302748711|gb|ADL63836.1| ribosomal protein S3 [Dipsacus sp. Qiu 95111]
Length = 484
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 85/172 (49%), Gaps = 7/172 (4%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 311 KLMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 369
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-----FRRAMKRAVQSAMRFGADGVKVI 152
+ ++ +A+ IAQ I+ Q + + F + +K ++ M+ G +G+++
Sbjct: 370 NTLIESVKIKSVYQSASPIAQDISFQPKNKTRSFHSIFSKIVKD-IRLVMKKGVEGIRIC 428
Query: 153 ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RT+C G+ IDY A T YG G+KV++S
Sbjct: 429 CSGRSKGAEIARTKCGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 480
>gi|320580879|gb|EFW95101.1| 40S ribosomal protein S3 [Pichia angusta DL-1]
Length = 235
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 13/186 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ L + G A + + T +I+ + ++G+KG
Sbjct: 13 ADGVFYAEL-------NEFFTRELPEEGYAGVEVRITPTKTEVIISATNTQRVLGEKGRR 65
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K I L V ++A +S+ +L + RRA ++
Sbjct: 66 INELTSLIQKRFKFAPGTIVLFAERVQDRGLSAVTQCESLKYKLLNGLAVRRAAYGVIRH 125
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA GV+V+ SG+ GA +++ + +G + Q + ID T G GI
Sbjct: 126 VMESGAKGVEVVISGKSKGA-RAKSMKFGDGFMIHSGQPVNDFIDVATRHVLLRQGVLGI 184
Query: 199 KVYVSL 204
KV +
Sbjct: 185 KVKIMK 190
>gi|288191134|gb|ADC43920.1| ribosomal protein S3 [Garcinia macrophylla]
Length = 384
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ G+ LI+ II+ + R +++K+R +SN T +
Sbjct: 212 KVMELIEK-FINLGLIGELIKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLVSNRTKT 270
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL +R FR + V+ M+ G +G+++
Sbjct: 271 NTLIESVKMKSVYQSASPIAQDISFQLRNKRRSFRSIFTKIVKDILFVMKNGLEGIRICC 330
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GA+++RTEC G+ IDY A T YG G+KV++S
Sbjct: 331 SGRSKGAKIARTECGNYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 381
>gi|328541186|gb|AEB21817.1| ribosomal protein S3 [Telaranea tasmanica]
Length = 375
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 8/173 (4%)
Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGK------KGTDIEKIRKKLS 92
IR+ + + + I + GK + ++K++ S
Sbjct: 204 IRKAIPTAEQGTRSGES-IRQPGSTLYFDAIIFLRHARFGKATSLSSRYYYLKKMQSLFS 262
Query: 93 NMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRF-GADGVKV 151
+ T + + ++ +A+LIAQ I+ +LE++ FR+ + + + G+++
Sbjct: 263 DQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFRQIKKCPYVKGIRI 322
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SG LNGAE+++TE G L IDY A T YG G+KV+VS
Sbjct: 323 GCSGXLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGVKVWVSY 375
>gi|197131007|gb|ACH47052.1| ribosomal protein S3 [Isoetes engelmannii]
gi|209916086|gb|ACI95881.1| ribosomal protein S3 [Isoetes engelmannii]
Length = 399
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 4/124 (3%)
Query: 85 EKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRF 144
KI S+ TN+ + ++ +A+LIA+ I+ +LER+ F+R +
Sbjct: 260 TKIETLSSSRTNTFTSIEPVKITCVYKSASLIAKEISYELERKKSFQRICGLIFERIENC 319
Query: 145 GA----DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200
G+++ SGR GAE+++TE G L IDY A A T YG+ G+KV
Sbjct: 320 NCNKYAKGIRIRCSGRFKGAEIAKTEYIKSGETSLHVFSDQIDYAEAGASTPYGTLGVKV 379
Query: 201 YVSL 204
+VS
Sbjct: 380 WVSY 383
Score = 62.3 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54
M QK+NPI RL N + +S WF+ +G LL++D +R+Y + + + +
Sbjct: 1 MAQKVNPISVRLNFNRSSDSGWFSDYY-FGKLLYQDFNLRDYFGSIRPPRRNKFGLRLGR 59
Query: 55 ILIERTHKNCRIIVY 69
+I K I +Y
Sbjct: 60 CIIHHFTKRTFIHLY 74
>gi|223928012|gb|ACN23660.1| ribosomal protein S3 [Halimeda lacunalis]
Length = 157
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 43/154 (27%), Positives = 74/154 (48%), Gaps = 14/154 (9%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S+W+A + Y + ED IR L K+A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSQWYASKTNYSKYVLEDNFIRTILSEKYKRAKFVKIQISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKK-----GTDIEKIRKKLSNMTNSEIHLSVN-----EVPKP 109
+ I++++ +P ++IGKK I + + K I + + +
Sbjct: 61 IEDHLEIVIHAQKPDILIGKKIDSRESLKIFQKQIKKFIFQYRGIEWNSKLKVILYIFRC 120
Query: 110 EINATLIAQSIAQQLERRVVFRRAM---KRAVQS 140
+ +A+ IA I + LE+RV ++ K+ +Q
Sbjct: 121 KTSASSIADFIVEHLEKRVPYKVVFVLLKKHLQR 154
>gi|302748955|gb|ADL63957.1| ribosomal protein S3 [Phytolacca sp. Qiu 94109]
Length = 475
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 50/167 (29%), Positives = 86/167 (51%), Gaps = 5/167 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ + ++ + G+ + LI+ II+ + R +++K+R LSN TN+
Sbjct: 310 KVMKLIEKFIDLGGI-RELIKGIEMMIEIILKNRRIPYGYNSYLNEVKKMRSLLSNRTNT 368
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + +R FR + V++ M+ G +G+++
Sbjct: 369 NTLIESVKIQSVYQSASPIAQDISFQPKNKRRSFRSIFSKIVKNIPLVMKKGIEGIRICC 428
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200
SGRL GAE++RTEC G+ L IDY +A T YG G+KV
Sbjct: 429 SGRLEGAEIARTECGKYGKTSCNVLHQKIDYASAEVSTRYGILGVKV 475
>gi|302748927|gb|ADL63943.1| ribosomal protein S3 [Pachysandra terminalis]
Length = 483
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 9/172 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ I + + + G +++K+R LSN T
Sbjct: 315 KVMELIEKFIDLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEVKKMRSLLSNRT 371
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++
Sbjct: 372 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIPLVMQKGVEGIRI 431
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 432 CCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 483
>gi|302748943|gb|ADL63951.1| ribosomal protein S3 [Petrophile canescens]
Length = 478
Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 5/170 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 310 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 368
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M G +G+++
Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIPLVMPKGVEGIRICC 428
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 429 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 478
>gi|302748897|gb|ADL63928.1| ribosomal protein S3 [Nelumbo nucifera]
Length = 483
Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 48/170 (28%), Positives = 81/170 (47%), Gaps = 5/170 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 315 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 373
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M G +G+++
Sbjct: 374 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIPLVMPKGVEGIRICC 433
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 434 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 483
>gi|314908362|gb|ADT62128.1| ribosomal protein S3 [Isoetes engelmannii]
Length = 399
Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 4/124 (3%)
Query: 85 EKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRF 144
KI S+ TN+ + ++ +A+LIA+ I+ +LER+ F+R +
Sbjct: 260 TKIETLSSSRTNTFTLIEPVKITCVYKSASLIAKEISYELERKKSFQRICGLIFERIENC 319
Query: 145 GA----DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200
G+++ SGR GAE+++TE G L IDY A A T YG+ G+KV
Sbjct: 320 NCNKYVKGIRIRCSGRFKGAEIAKTEYIKSGETSLHVFSDQIDYAEAGASTPYGTLGVKV 379
Query: 201 YVSL 204
+VS
Sbjct: 380 WVSY 383
Score = 57.7 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54
M QK+NPI RL N + + WF+ +G LL++D +R+Y + + + +
Sbjct: 1 MAQKVNPISVRLNFNRSSDLGWFSDYY-FGKLLYQDFNLRDYFGSIRPPRRNKFGLRLGR 59
Query: 55 ILIERTHKNCRIIVY 69
+I K I +Y
Sbjct: 60 CIIHHFTKRTFIHLY 74
>gi|167933149|ref|ZP_02520236.1| 30S ribosomal protein S3 [candidate division TM7 single-cell
isolate TM7b]
Length = 89
Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 42/90 (46%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI RLG+ W+S WF G +G L ED IR YL L++A V++I+IERT
Sbjct: 1 MGQKVNPISNRLGIIRGWDSNWF-GGKNFGDNLLEDKNIRAYLNKRLEKASVSRIVIERT 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90
K I + +ARPGL+IGK + +K
Sbjct: 60 LKLVTITICTARPGLVIGKVVRMLINSKKN 89
>gi|288191132|gb|ADC43919.1| ribosomal protein S3 [Garcinia latissima]
Length = 385
Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 83/171 (48%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ G+ LI+ II+ + R +++K+R +SN T +
Sbjct: 216 KVMELIEK-FINLGLIGELIKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLVSNRTKT 274
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL +R FR + + V+ M+ G +G+++
Sbjct: 275 NTLIESVKMKSVYQSASPIAQDISFQLRNKRRSFRSILTKIVKDILFVMKKGLEGIRICC 334
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GA+++RTEC G+ IDY A T YG G+KV++S
Sbjct: 335 SGRSKGAKIARTECGNYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 385
>gi|272716618|gb|ACZ95613.1| ribosomal protein S3 [Diselma archeri]
Length = 634
Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 67/152 (44%), Gaps = 9/152 (5%)
Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + + G ++ K+R LS TN+ + ++ +A+ IAQ I
Sbjct: 481 GMMIRIIPKNRKIPYGYNYYLNEVRKMRSLLSGGTNANTFIRSVKIKSVYQSASPIAQDI 540
Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173
+ QL FR + V+ R G G+++ GRL GAE++RTEC G+
Sbjct: 541 SFQLRDGTRSFRSIFLKIVRDISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKT 600
Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
T R IDY A T YG G+KV++
Sbjct: 601 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 632
>gi|302748836|gb|ADL63898.1| ribosomal protein S3 [Lardizabala biternata]
Length = 478
Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 48/170 (28%), Positives = 82/170 (48%), Gaps = 5/170 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 310 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 368
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M G +G+++
Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRAFRSIFSKIVKDIPLVMPKGVEGIRICC 428
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RTEC G+ IDY +A T YG G+KV +S
Sbjct: 429 SGRSEGAEIARTECGKSGKTSRNVFNQKIDYASAEVSTRYGISGVKVRIS 478
>gi|302748729|gb|ADL63845.1| ribosomal protein S3 [Eschscholzia californica]
Length = 481
Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 5/169 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ ++ G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 314 KVMELIEKFIELGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 372
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M G +G+++
Sbjct: 373 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMPKGVEGIRICC 432
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202
SGR GAE++RTEC G+ IDY A T YG G+KV +
Sbjct: 433 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRI 481
>gi|61654704|gb|AAX48878.1| S3 [Suberites domuncula]
Length = 246
Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 39/191 (20%), Positives = 75/191 (39%), Gaps = 11/191 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 NFLSRELSEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPDG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A +S+ +L + RRA ++ M GA G +VI SG+L
Sbjct: 83 TVELYAEKVAARGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL 142
Query: 158 NGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
G + +++ +++G + ID G GIKV + D T
Sbjct: 143 RG-QRAKSMKFVDGFMIHSGFPTKEYIDSAVTHVHLRQGVLGIKVKIM-----LPHDPTG 196
Query: 216 PAAEHRVVEKD 226
+ + +
Sbjct: 197 KSGPKKPLPDQ 207
>gi|212723988|ref|NP_001132637.1| hypothetical protein LOC100194112 [Zea mays]
gi|194694962|gb|ACF81565.1| unknown [Zea mays]
Length = 232
Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 6/169 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E L L + G + + + T II+ + R ++G+KG I ++ + N
Sbjct: 25 EMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPEG 84
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L
Sbjct: 85 GVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKL 144
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
A+ +++ + +G + + +ID G GIKV + L
Sbjct: 145 R-AQRAKSMKFKDGYMISSGHPVNLYIDSAVRHVLLRQGVLGIKVKIML 192
>gi|302748987|gb|ADL63973.1| ribosomal protein S3 [Ranunculus sp. Qiu 95024]
Length = 453
Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 9/172 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E+L + G+ + I + + + G +++K+R LSN T
Sbjct: 285 KVIEFLDKLIDLGGIGE---WIKGIEMMIEIILRKRKIPYGYNSYLNEVKKMRSLLSNRT 341
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS---AMRFGADGVKV 151
N+ + ++ +A+ IAQ I+ Q + FR + V++ M+ G+++
Sbjct: 342 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKNLKFVMKKKVKGIRI 401
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RTECY G+ IDY +A T YG G+KV +S
Sbjct: 402 SCSGRSEGAEIARTECYKYGKTSRNVFNQKIDYASAEVSTRYGISGVKVRIS 453
>gi|307101741|ref|YP_003875491.1| ribosomal protein S3 [Silene latifolia]
gi|301338036|gb|ADK73328.1| ribosomal protein S3 [Silene latifolia]
Length = 590
Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 49/172 (28%), Positives = 89/172 (51%), Gaps = 7/172 (4%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ + ++ + G+ + LI+ II+ + R +++K+R LSN T +
Sbjct: 365 KVMKLIEKFIDLGGI-RELIKGIEMMIEIILKNRRIPYGYSSYLNEVQKMRSLLSNRTKT 423
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-----FRRAMKRAVQSAMRFGADGVKVI 152
+ ++ +A+LIAQ I+ QL+ + F + +K+ + M+ G +G+++
Sbjct: 424 NTLIESVKITSVYQSASLIAQDISFQLKNQSREFSSIFSKIVKK-IPLVMKKGIEGIRIC 482
Query: 153 ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ L DY +A+ T YG G+KV++S
Sbjct: 483 CSGRLQGAEIARTECGKYGKTSCNVLHQKRDYASALVSTRYGIVGVKVWISY 534
>gi|302748995|gb|ADL63977.1| ribosomal protein S3 [Rivina humilis]
Length = 469
Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 47/164 (28%), Positives = 82/164 (50%), Gaps = 2/164 (1%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ + ++ + G+ + LI+ II+ + R +++K+R LSN TN+
Sbjct: 307 KVMKLIEKFIDLGGI-RELIKGIEMMIEIILKNRRIPYGYNSYLNEVKKMRSLLSNRTNT 365
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLER-RVVFRRAMKRAVQSAMRFGADGVKVIASGR 156
+ ++ +A+ IAQ I+ + ++ R FR + V+ +G+++ SGR
Sbjct: 366 NTLIESVKIKSVYQSASPIAQDISLKPKKKRRSFRSIFSKIVKKIPLVMVEGIRICCSGR 425
Query: 157 LNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200
L GAE++RTEC G+ L IDY +A T YG G+KV
Sbjct: 426 LAGAEIARTECGKYGKTSCNVLHQKIDYASAEVSTRYGILGVKV 469
>gi|328541256|gb|AEB21852.1| ribosomal protein S3 [Acromastigum stellare]
Length = 376
Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 39/126 (30%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 251 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 310
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 311 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKCGETSLHVFSDQIDYAKTQASTPYGILGV 370
Query: 199 KVYVSL 204
KV+VS
Sbjct: 371 KVWVSY 376
>gi|42559863|sp|Q95749|RT03_ARATH RecName: Full=Ribosomal protein S3, mitochondrial
Length = 556
Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 4/169 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
KI E ++ G+ ++ I+ II+ +++K+R LSN TN+
Sbjct: 375 KIMELIEKLKNLGGIEEL-IKVIDMMIEIILRKRGIPYRYNSYFYEVKKMRSFLSNRTNT 433
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156
+ + ++ +A+LIAQ I+ QL+ +R F + V+ + G +G+++ SGR
Sbjct: 434 KTLIESVKIKSVYQSASLIAQDISFQLKNKRRSFHSIFAKIVKEIPK-GVEGIRICFSGR 492
Query: 157 LN-GAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
L AE ++T+CY + IDY T YG G+KV++S
Sbjct: 493 LKDAAEKAQTKCYKHRKTSCNVFNHKIDYAPVEVFTRYGILGVKVWISY 541
Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 52/154 (33%), Gaps = 20/154 (12%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54
M +K NPI RLG N + +S WF+ YG +++D+ +R Y + +
Sbjct: 1 MARKGNPISVRLGKNRSSDSSWFSEYY-YGKFVYQDVNLRSYFGSIRPPTRLTFGFRLGR 59
Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINAT 114
+I K R ++ P K + + K+ + E +
Sbjct: 60 CIILHFPK--RTFIHFFLPRRPRRLKRREKTRPGKEKGRWWTTFGKAGPIECLHSSDDTE 117
Query: 115 LIAQSIAQQLERRVVFR-RAMKRAVQSAMRFGAD 147
E R R R ++ V+S
Sbjct: 118 ----------EERNEVRGRGARKRVESIRLDDRK 141
>gi|302749009|gb|ADL63984.1| ribosomal protein S3 [Sarcandra chloranthoides]
Length = 481
Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 308 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVQKMRSLLSNRTNT 366
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++
Sbjct: 367 NTLIESVKIKSVYQSASPIAQDISFQPRNKTISFRSIFSKIVKDIPLVMQKGVEGIRICC 426
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 427 SGRSEGAEIARTECGKYGKTSRNVFYQKIDYAPAEVSTRYGISGVKVRISY 477
>gi|242398285|ref|YP_002993709.1| 30S ribosomal protein S3P [Thermococcus sibiricus MM 739]
gi|259495260|sp|C6A165|RS3_THESM RecName: Full=30S ribosomal protein S3P
gi|242264678|gb|ACS89360.1| 30S ribosomal protein S3P [Thermococcus sibiricus MM 739]
Length = 207
Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 58/194 (29%), Positives = 99/194 (51%), Gaps = 13/194 (6%)
Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-S 97
I EYL+ L++AG + I++T +++++ RPG +IG+ G I ++ + L N
Sbjct: 17 IDEYLEKELRRAGYGGLDIKKTPLGTKVVIFVERPGFVIGRGGRKIRELTRILERRFNLE 76
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ V E+ NA + A +AQ LER V FRRA A+++ M GA GV++ SG+L
Sbjct: 77 NPQIEVEEIKNSYFNAKVQATRLAQALERGVHFRRAAYAAIRAIMSNGARGVEIRISGKL 136
Query: 158 NGAELSRTECYLEGRV-----PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSD 212
G E +++ + +G + P +TL + G A A G G+KV + D +
Sbjct: 137 TG-ERAKSVRFYQGYIAKVGNPAETL---VSRGYAQALLKLGVLGVKVSIMPPDARLPDE 192
Query: 213 STIPAAEHRVVEKD 226
I + +E++
Sbjct: 193 IEIV---EKPIEEE 203
>gi|313631772|gb|EFR98960.1| ribosomal protein S3 [Listeria seeligeri FSL N1-067]
Length = 76
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 32/75 (42%), Positives = 45/75 (60%)
Query: 145 GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
GA G+K SGRL GA+++R E Y EG VPL TLRA IDY A+T YG G+KV++
Sbjct: 2 GAKGIKTQVSGRLGGADIARAEHYSEGTVPLHTLRADIDYAWEEADTTYGKLGVKVWIYR 61
Query: 205 RDEVSDSDSTIPAAE 219
+ + + + +
Sbjct: 62 GEVLPTKKNNVEGGK 76
>gi|302748784|gb|ADL63872.1| ribosomal protein S3 [Hernandia ovigera]
Length = 483
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 50/171 (29%), Positives = 83/171 (48%), Gaps = 7/171 (4%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ ++R +++KIR LSN T +
Sbjct: 315 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNSRIPYGYNSYLNEVQKIRSLLSNRTKT 373
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLER-----RVVFRRAMKRAVQSAMRFGADGVKVI 152
+ ++ +A+ IAQ I+ Q RV+F + +K +Q M G G+++
Sbjct: 374 NTLIESVKIQSVYQSASPIAQDISFQPRNKTRSFRVIFSKIVKD-IQLVMPKGVTGIRIC 432
Query: 153 ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 433 CSGRSGGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 483
>gi|288191229|gb|ADC43967.1| ribosomal protein S3 [Froesia diffusa]
Length = 477
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 44/173 (25%), Positives = 82/173 (47%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ I + + + G +++K+R LSN T
Sbjct: 305 KVMELIEKFINLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLKEMKKMRSLLSNRT 361
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM----KRAVQSAMRFGADGVKV 151
+ + ++ +A+ IAQ I+ QL + R++ + + M+ G +G+++
Sbjct: 362 KTNTLIESVKIQSVYQSASPIAQDISFQLRNKKRSLRSILSKIVKDIPLVMKKGVEGIRI 421
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G++ IDY A T YG G+KV++S
Sbjct: 422 CCSGRSEGAEIARTECGKYGKISRNVFNQKIDYAPAEVSTRYGISGVKVWISY 474
>gi|13541161|ref|NP_110849.1| 30S ribosomal protein S3P [Thermoplasma volcanium GSS1]
gi|27734525|sp|Q97BX1|RS3_THEVO RecName: Full=30S ribosomal protein S3P
gi|14324549|dbj|BAB59476.1| ribosomal protein small subunit S3 [Thermoplasma volcanium GSS1]
Length = 225
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 48/187 (25%), Positives = 95/187 (50%), Gaps = 7/187 (3%)
Query: 31 ALLHEDLK---IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKI 87
++E +K + EYL + AG K+ ++RT I +Y RPGL+IG++G+ ++++
Sbjct: 5 KFVNEAVKRLLVYEYLVKETENAGFGKMSMKRTPFGTNITLYVNRPGLVIGRRGSKVQQM 64
Query: 88 RKKLSNMT-NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGA 146
+ L + V +V P++N ++IA+ IA LE+ +R+A +++ + GA
Sbjct: 65 TETLEKKYAIETPQIEVKDVKDPDLNPSVIAKKIALSLEKGWSYRKAGNTSLKRTIDAGA 124
Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
GV + SG+++G E +R + ++ G V + + G + A+ G G+ V +
Sbjct: 125 RGVLIKISGKISG-ERARYQKFIYGNVKYSGEPGSKGMLVGFSTAKLKVGILGVTVKILN 183
Query: 205 RDEVSDS 211
+
Sbjct: 184 PEYKLPD 190
>gi|302749003|gb|ADL63981.1| ribosomal protein S3 [Sabia sp. Qiu 91025]
Length = 478
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 47/172 (27%), Positives = 79/172 (45%), Gaps = 9/172 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ R I + + G +++K+R LSN T
Sbjct: 310 KVMELIEKFIDLGGIGEL---RKGIEMMIEIILRNRRIPYGYNSYLNEVQKMRSLLSNRT 366
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ Q + FR + V+ M G +G+++
Sbjct: 367 NTNTFIESVKIKSVYQSASPIAQDISFQPRNKTRAFRSIFSKIVKDIPLVMPKGVEGIRI 426
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 427 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 478
>gi|272716564|gb|ACZ95573.1| ribosomal protein S3 [Taxus wallichiana var. chinensis]
Length = 558
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 47/156 (30%), Positives = 68/156 (43%), Gaps = 11/156 (7%)
Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINA 113
++I KN RI ++ K+R LS TN + ++ +A
Sbjct: 410 GMMIGVIPKNRRI-------PYGYNYYSNEVRKMRSLLSGGTNVNTSIGSVKIESVYQSA 462
Query: 114 TLIAQSIAQQLERRVV-FRRAMKRAVQ---SAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ IAQ I+ QL FR R V+ M G G+++ GRL GAE++RTEC
Sbjct: 463 SPIAQDISFQLRDGTRSFRSIFGRIVRDIPLIMPKGVGGIRICCPGRLKGAEIARTECRE 522
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
G+ R IDY A T YG G+KV++
Sbjct: 523 YGKTSCNAFRHQIDYAYAKVSTRYGILGVKVWIPFP 558
>gi|302748778|gb|ADL63869.1| ribosomal protein S3 [Hedyosmum arborescens]
Length = 481
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E + + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 312 KVMELIDKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVQKMRSLLSNRTNT 370
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M G +G+++
Sbjct: 371 HTLIESVKIKSFYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIPLVMPKGVEGIRICC 430
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 431 SGRSEGAEIARTECGKYGKTSRNVFYQKIDYAPAEVSTRYGISGVKVRISY 481
>gi|302748613|gb|ADL63787.1| ribosomal protein S3 [Campanula rotundifolia]
Length = 484
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 47/178 (26%), Positives = 82/178 (46%), Gaps = 5/178 (2%)
Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90
L+ +D R ++ + G+ ++ I+ II+ R +++K
Sbjct: 303 NLITKDKVKRRLIEKFIDLGGIGEL-IKGIEMMMEIILRKRRIPYGYNFYLNEVKKFLSL 361
Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGA 146
LSN T + ++ ++ +A+ IAQ I+ Q + FR + V+ M+ G
Sbjct: 362 LSNRTKTNTLINSVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIPLVMKKGV 421
Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
+G+++ SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 422 EGIRISCSGRSEGAEIARTECGKYGKTSGNVFHQKIDYAPAQVSTRYGIPGVKVWISY 479
>gi|302748997|gb|ADL63978.1| ribosomal protein S3 [Roupala macrophylla]
Length = 506
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN T +
Sbjct: 325 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTKT 383
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M G +G+++
Sbjct: 384 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIPLVMPKGVEGIRICC 443
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 444 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRISY 494
>gi|302748764|gb|ADL63862.1| ribosomal protein S3 [Gossypium arboreum]
Length = 512
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 87/181 (48%), Gaps = 9/181 (4%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKG---TDIEKIRKKLSNM 94
K+ E ++ + G+ +++ II+ + + G +++K++ LSN
Sbjct: 328 KVMELIEKFINLGGIEELIKGIEMIIEIIIL--RKTIIPYGYNNSYLNEVKKMQSLLSNR 385
Query: 95 TNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVK 150
TN+ + ++ +A+ IAQ I+ QL ++ FR ++ V+ M+ G G++
Sbjct: 386 TNTNTLIESVKIKSVYQSASPIAQDISLQLRKKTRSFRSIFRKIVKEIPLVMKKGVSGIR 445
Query: 151 VIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSD 210
+ SGRL GAE++RTEC G+ IDY A T YG G+KV++S +
Sbjct: 446 ICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISYSKKKGG 505
Query: 211 S 211
Sbjct: 506 R 506
>gi|328541270|gb|AEB21859.1| ribosomal protein S3 [Chloranthelia denticulata]
Length = 373
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 65/124 (52%), Gaps = 1/124 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369
Query: 199 KVYV 202
KV+V
Sbjct: 370 KVWV 373
>gi|328541298|gb|AEB21873.1| ribosomal protein S3 [Telaranea pulcherrima var. pulcherrima]
Length = 375
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 66/126 (52%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369
Query: 199 KVYVSL 204
KV++S
Sbjct: 370 KVWLSY 375
>gi|328541304|gb|AEB21876.1| ribosomal protein S3 [Telaranea meridiana]
Length = 374
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 1/125 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369
Query: 199 KVYVS 203
KV+VS
Sbjct: 370 KVWVS 374
>gi|302748563|gb|ADL63762.1| ribosomal protein S3 [Atherosperma moschatum]
Length = 478
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 5/170 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++KIR LSN TN+
Sbjct: 310 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKIRSLLSNRTNT 368
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M G +G+++
Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIPIVMPKGVEGIRICC 428
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 429 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 478
>gi|302748961|gb|ADL63960.1| ribosomal protein S3 [Piper betle]
Length = 482
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 46/170 (27%), Positives = 78/170 (45%), Gaps = 7/170 (4%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ + I + + +++KIR LSN TN+
Sbjct: 316 KVMELIEKFIDLGGIGEF---LKGIEMMIEIILKNRSIPYNSYLNEVQKIRSLLSNRTNT 372
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRA---VQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q +R FR + + + M+ G +G+++
Sbjct: 373 NTLIESVKIKSVYQSASPIAQDISFQPRNKRRSFRSILSQIWKEIPLVMQKGVEGIRICC 432
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGRL GAE++RT C G+ IDY A T YG G+KV +S
Sbjct: 433 SGRLKGAEIARTACGKYGKTSRNVFNKKIDYAPAEVSTRYGILGVKVRIS 482
>gi|302748589|gb|ADL63775.1| ribosomal protein S3 [Brasenia schreberi]
Length = 474
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 9/171 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E+L + G+ + + + + G +++K+R LSN T
Sbjct: 308 KVMEFLDQFIDLGGIGEF---LKGIEMILEIILRNRRIPYGYNSYLNEVQKMRSLLSNRT 364
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSA---MRFGADGVKVI 152
+ + ++ +A+ IAQ I+ Q R FR + V+ M G +G+++
Sbjct: 365 KTNTLMESVKIKSVYQSASPIAQDISFQPRSRS-FRSIFSQIVKDIPLVMPKGVEGIRIS 423
Query: 153 ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 424 CSGRSKGAEIARTECGKYGKTSCNVFHQKIDYAPAEVSTRYGISGVKVRIS 474
>gi|302748828|gb|ADL63894.1| ribosomal protein S3 [Juglans cinerea]
Length = 499
Score = 99.3 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 80/168 (47%), Gaps = 5/168 (2%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIH 100
E + + G+ ++ I+ II+ + R +++K+R LSN T +
Sbjct: 328 ELIDKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTKTNTL 386
Query: 101 LSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGR 156
+ ++ +A+ IAQ I+ +L + FR + V+ M+ G +G+++ SGR
Sbjct: 387 IESVKIKSVYQSASPIAQDISFELRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICCSGR 446
Query: 157 LNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 447 SEGAEIARTECGKYGKTSRNIFNQKIDYAPAEVSTRYGILGVKVWISY 494
>gi|160550139|gb|ABX44774.1| putative 40S ribosomal protein RPS3 [Flustra foliacea]
Length = 234
Score = 99.3 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 40/183 (21%), Positives = 78/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E+L L + G + + + T II+ + R ++G+KG I ++ +K N
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQSVLGEKGRRIRELTAVVQKRFNFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A +S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 TVELYAEKVNNRGLCAIAQCESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + ++ +++G + + R ++D G GIKV + L ++
Sbjct: 143 RG-QRAKAMKFVDGLMIHSGEPSREYVDTAVRHVLLRQGVLGIKVKIMLPWDQTGKIGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|328541300|gb|AEB21874.1| ribosomal protein S3 [Telaranea pulcherrima var. mooreana]
Length = 374
Score = 99.3 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 1/125 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369
Query: 199 KVYVS 203
KV+VS
Sbjct: 370 KVWVS 374
>gi|302748887|gb|ADL63923.1| ribosomal protein S3 [Morella cerifera]
Length = 499
Score = 99.3 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 44/170 (25%), Positives = 78/170 (45%), Gaps = 9/170 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSE 98
E ++ + G+ ++ I + + G +++K+R LSN T +
Sbjct: 328 ELIEKFIDLGGIGEL---IKGIEMMIEIILRNRIIPYGYNSYLNEVKKMRSLLSNRTKTN 384
Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIAS 154
+ ++ +A+ IAQ I+ +L + FR + V+ M+ G +G+++ S
Sbjct: 385 TLIESVKIKSVYQSASPIAQDISFELRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICCS 444
Query: 155 GRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
GR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 445 GRSEGAEIARTECGKYGKTSRNIFNQKIDYAPAEVSTRYGILGVKVWISY 494
>gi|302306412|ref|NP_982809.2| ABL138Wp [Ashbya gossypii ATCC 10895]
gi|299788504|gb|AAS50633.2| ABL138Wp [Ashbya gossypii ATCC 10895]
Length = 244
Score = 99.3 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 45/212 (21%), Positives = 82/212 (38%), Gaps = 16/212 (7%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ L + G + + + T +I+ + R ++G+ G
Sbjct: 13 ADGVFYAEL-------NEFFTRELAEEGYSGVEVRVTPTTTEVIIRATRTQDVLGENGRR 65
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K I L V + ++A A+S+ +L + RRA V+
Sbjct: 66 INELTLLVQKRFKYQPGTIVLFAERVQERGLSAVAQAESLRFKLLNGLAIRRAAYGVVRY 125
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q + ID T G GI
Sbjct: 126 VMESGAKGCEVVISGKLRAA-RAKSMKFSDGFLIHSGQPVNDFIDTATRHVLLRQGVLGI 184
Query: 199 KVYVSL---RDEVSDSDSTIPAAEHRVVEKDS 227
KV + + ++D+
Sbjct: 185 KVKIMKDPSKSRTGPKALPDAVKILEPKDEDA 216
>gi|255637340|gb|ACU19000.1| unknown [Glycine max]
Length = 236
Score = 99.3 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 78/169 (46%), Gaps = 6/169 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E L L + G + + + T II+ + R ++G+KG I ++ +K +
Sbjct: 23 EVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLGEKGRRIRELTSVVQKRFKFPEN 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L
Sbjct: 83 SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
A+ +++ + +G + Q ++ +ID+ G GIKV + L
Sbjct: 143 R-AQRAKSMKFKDGYMIFSGQPVKDYIDFAVRHVLLRQGVLGIKVKIML 190
>gi|302748661|gb|ADL63811.1| ribosomal protein S3 [Clusia rosea]
Length = 393
Score = 99.3 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 43/173 (24%), Positives = 80/173 (46%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + + + I + + G +++K+R +SN T
Sbjct: 218 KVMELIEKFINLGLIGE---WIKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLVSNRT 274
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151
+ + ++ +A+ IAQ I+ +L +R FR + + V+ M+ G +G+++
Sbjct: 275 KTNTLIESVKIQSVYQSASPIAQDISLKLRNKRRSFRSILSQIVKDILFVMKKGLEGIRI 334
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GA+++RTEC G+ IDY A T YG G+KV++S
Sbjct: 335 CCSGRSKGAKIARTECGNYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 387
>gi|302748875|gb|ADL63917.1| ribosomal protein S3 [Menispermum canadense]
Length = 479
Score = 99.3 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 5/170 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 311 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 369
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + + + M G +G+++
Sbjct: 370 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSILSQIVKDIPLVMPKGVEGIRICC 429
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 430 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 479
>gi|272716582|gb|ACZ95586.1| ribosomal protein S3 [Libocedrus yateensis]
Length = 626
Score = 99.3 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 9/152 (5%)
Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + + G ++ K+R LS +TN+ + ++ +A+ IAQ I
Sbjct: 473 GMMIRIIPKNRRIPYGYNYYLNEVRKMRSFLSGVTNANTLIRSVQIKSVYQSASPIAQDI 532
Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173
+ QL FR + V+ R G G+++ GRL GAE++RTEC G+
Sbjct: 533 SFQLRDGTRSFRSIFFKIVREISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKT 592
Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
T R IDY A T YG G+KV++
Sbjct: 593 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 624
>gi|254580157|ref|XP_002496064.1| ZYRO0C09636p [Zygosaccharomyces rouxii]
gi|238938955|emb|CAR27131.1| ZYRO0C09636p [Zygosaccharomyces rouxii]
Length = 246
Score = 99.3 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 47/213 (22%), Positives = 84/213 (39%), Gaps = 21/213 (9%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ L + G + + T II+ + R ++G+ G
Sbjct: 13 ADGVFYAEL-------NEFFTRELAEEGYSGTEVRVTPTKTEIIIRATRTQDVLGEGGRR 65
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K I L V + ++A A+S+ +L + RRA V+
Sbjct: 66 INELTLLVQKRFKYKPGTIVLYAERVQERGLSAVAQAESMKFKLLNGLAIRRAAYGVVRY 125
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q + ID T G GI
Sbjct: 126 VMESGAKGCEVVVSGKLRAA-RAKSMKFADGFLIHSGQPVADFIDTATRHVLMRQGVLGI 184
Query: 199 KVYVSL--------RDEVSDSDSTIPAAEHRVV 223
KV + + + D+ + + E +
Sbjct: 185 KVKIMRDPATTPSGPNALPDAVTIVDPKEEEPI 217
>gi|302748617|gb|ADL63789.1| ribosomal protein S3 [Canella winterana]
Length = 483
Score = 99.3 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 48/170 (28%), Positives = 80/170 (47%), Gaps = 5/170 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + R +++KIR LSN TN+
Sbjct: 315 KVMELIEKFIDLGRIGEL-IKGIEMMIEIILKNRRIPYGYNSYLNEVQKIRSLLSNRTNT 373
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M G +G+++
Sbjct: 374 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMPKGVEGIRICC 433
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 434 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 483
>gi|272716540|gb|ACZ95555.1| ribosomal protein S3 [Pilgerodendron uviferum]
Length = 626
Score = 99.3 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 9/152 (5%)
Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + + G ++ K+R LS +TN+ + ++ +A+ IAQ I
Sbjct: 473 GMMIRIIPKNRRIPYGYNYYLNEVRKMRSFLSGVTNANTLIRSVQIKSVYQSASPIAQDI 532
Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173
+ QL FR + V+ R G G+++ GRL GAE++RTEC G+
Sbjct: 533 SFQLRDGTRSFRSIFFKIVREISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKT 592
Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
T R IDY A T YG G+KV++
Sbjct: 593 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 624
>gi|302749075|gb|ADL64017.1| ribosomal protein S3 [Tasmannia insipida]
Length = 484
Score = 99.3 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + R +++KIR LSN TN+
Sbjct: 315 KVMELIEKFIDLGRIGEL-IKGIEMMIEIILKNRRIPYGYNSYLNEVQKIRSLLSNRTNT 373
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M G +G+++
Sbjct: 374 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMPKGVEGIRICC 433
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 434 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRISY 484
>gi|302748557|gb|ADL63759.1| ribosomal protein S3 [Aristolochia macrophylla]
Length = 478
Score = 99.3 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 5/170 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E + + G+ ++ I+ II+ + R +++KIR L N +N+
Sbjct: 310 KVMELIDKFIDLGGIGEL-IKGIEMMIEIILKNRRIPYGYNSYLNEVQKIRSLLYNFSNT 368
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M G +G+++
Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIPLVMPKGVEGIRICC 428
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RTEC G+ IDY + T YG G+KV +S
Sbjct: 429 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYASTEVSTRYGISGVKVRIS 478
>gi|272716606|gb|ACZ95604.1| ribosomal protein S3 [Callitris rhomboidea]
Length = 647
Score = 99.3 bits (246), Expect = 4e-19, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 9/152 (5%)
Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + + G ++ K+R LS TN+ + ++ +A+ IAQ I
Sbjct: 494 GMMIRIIPTNRKIPYGYNYYLNEVRKMRSLLSGGTNANTFIRSVKIKSVYQSASPIAQDI 553
Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173
+ QL FR + V++ R G G+++ GRL GAE++RTEC G+
Sbjct: 554 SFQLRDGTRSFRSIFFQIVRNISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKP 613
Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
T R IDY A T YG G+KV++
Sbjct: 614 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 645
>gi|288191192|gb|ADC43949.1| ribosomal protein S3 [Ixonanthes reticulata]
Length = 499
Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 324 KVMELIEKFINLGKIGEL-IKGIEMMIEIILRNRRILYGYNSYLNEMKKMRSLLSNRTNT 382
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL ++ FR + V+ M+ G +G+++
Sbjct: 383 NTLIESVKMKSVYQSASPIAQDISFQLRNKIRSFRSIFSKIVKDIPLVMKKGVEGIRICC 442
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ I Y A T YG G+KV++S
Sbjct: 443 SGRSKGAEIARTECGKYGKTSRNVFNQKIYYAPAEVSTRYGISGVKVWISY 493
>gi|302748762|gb|ADL63861.1| ribosomal protein S3 [Gomortega keule]
Length = 477
Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 49/171 (28%), Positives = 82/171 (47%), Gaps = 7/171 (4%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++KIR LSN TN+
Sbjct: 309 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVQKIRSLLSNRTNT 367
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLER-----RVVFRRAMKRAVQSAMRFGADGVKVI 152
+ ++ +A+ IAQ I+ Q R +F + +K + M G +G+++
Sbjct: 368 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFCKIVKD-IPIVMPKGVEGIRIC 426
Query: 153 ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 427 CSGRSEGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGISGVKVRIS 477
>gi|302748641|gb|ADL63801.1| ribosomal protein S3 [Chloranthus multistachys]
Length = 478
Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 78/172 (45%), Gaps = 9/172 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ + I + + G +++K+R LSN T
Sbjct: 310 KVMELIEKFIDLGGIGE---WIKGIEMMIEIILRNRRIPYGYNSYLNEVQKMRSLLSNRT 366
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++
Sbjct: 367 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKTISFRSIFSQIVKDIPLVMQKGVEGIRI 426
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 427 CCSGRSEGAEIARTECGKYGKTSRNVFYQKIDYAPAEVSTRYGISGVKVRIS 478
>gi|302749103|gb|ADL64031.1| ribosomal protein S3 [Trochodendron aralioides]
Length = 478
Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 9/172 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ I + + + G +++K+R LSN T
Sbjct: 310 KVMELIEKFIDLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEVKKMRSLLSNRT 366
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++
Sbjct: 367 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIPLVMKKGVEGIRI 426
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 427 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 478
>gi|302748713|gb|ADL63837.1| ribosomal protein S3 [Drimys winteri]
Length = 478
Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 49/170 (28%), Positives = 81/170 (47%), Gaps = 5/170 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E+L+ + + ++ I+ II+ + R +++KIR LSN TN+
Sbjct: 310 KVMEFLEKFIDLGRIGEL-IKGIEMMIEIILKNRRIPYGYNSYLNEVQKIRSLLSNRTNT 368
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M G +G+++
Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMPKGVEGIRICC 428
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 429 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 478
>gi|302748727|gb|ADL63844.1| ribosomal protein S3 [Escallonia rubra]
Length = 498
Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 44/145 (30%), Positives = 72/145 (49%), Gaps = 6/145 (4%)
Query: 66 IIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQ 123
I + + + G +++K+R LSN TN+ + ++ +A+ IAQ I+ Q
Sbjct: 350 IEIILRKRRIPYGYNSYLNEVKKMRSLLSNRTNTNTLIESVKIKSVYQSASPIAQDISFQ 409
Query: 124 LERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
+ FR + V+ M+ G +G+++ SGRL GAE++RTEC G+
Sbjct: 410 PRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRISCSGRLEGAEIARTECGKYGKTSRNVFN 469
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSL 204
IDY A T YG G+KV++S
Sbjct: 470 QKIDYAPAEVSTRYGISGVKVWISY 494
>gi|328541328|gb|AEB21888.1| ribosomal protein S3 [Lepidozia ulothrix]
Length = 375
Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369
Query: 199 KVYVSL 204
KV+ S
Sbjct: 370 KVWXSY 375
>gi|272716528|gb|ACZ95546.1| ribosomal protein S3 [Austrocedrus chilensis]
Length = 654
Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 67/152 (44%), Gaps = 9/152 (5%)
Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + + G ++ K+R LS TN+ + ++ +A+ IAQ I
Sbjct: 501 GMMIRIIPKNRRIPYGYNYYLNEVRKMRSLLSGGTNANTFIRSVKIKSVYQSASPIAQDI 560
Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173
+ QL FR + V+ R G G+++ GRL GAE++RTEC G+
Sbjct: 561 SFQLRDGTRSFRSIFLKIVRDISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKT 620
Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
T R IDY A T YG G+KV++
Sbjct: 621 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 652
>gi|272716544|gb|ACZ95558.1| ribosomal protein S3 [Libocedrus bidwillii]
Length = 626
Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 9/152 (5%)
Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + + G ++ K+R LS +TN+ + ++ +A+ IAQ I
Sbjct: 473 GMMIRIIPKNRRIPYGYNYYLNEVRKMRSFLSGVTNANTLIRSVQIKSVYQSASPIAQDI 532
Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173
+ QL FR + V+ R G G+++ GRL GAE++RTEC G+
Sbjct: 533 SFQLRDGTRSFRSIFFKIVREISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKT 592
Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
T R IDY A T YG G+KV++
Sbjct: 593 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 624
>gi|46811251|gb|AAT01919.1| 40S ribosomal protein S3 [Pseudopleuronectes americanus]
Length = 246
Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 39/196 (19%), Positives = 81/196 (41%), Gaps = 10/196 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQSVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201
Query: 212 DSTIPAAEHRVVEKDS 227
+++S
Sbjct: 202 KPLPDHVSIVEPKEES 217
>gi|302748625|gb|ADL63793.1| ribosomal protein S3 [Carludovica palmata]
Length = 479
Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 10/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ I + + G +++K+R LSN T
Sbjct: 310 KVMELIEKFIDLGGIGEL---IKGIEMMIEIILRNRIIPYGYNSYLNEVQKMRSFLSNRT 366
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQSAMRFGA----DGVK 150
N+ + ++ +A+LIAQ I+ Q FR + V+ +G++
Sbjct: 367 NTNTLIESVKIKSVYQSASLIAQDISFQPRNNQISFRSIFSKIVKDIPSANTGLAVEGIR 426
Query: 151 VIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
+ SGRL GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 427 ICCSGRLGGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGISGVKVRIS 479
>gi|272716602|gb|ACZ95601.1| ribosomal protein S3 [Widdringtonia nodiflora]
Length = 641
Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 9/152 (5%)
Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + + G ++ K+R LS TN+ + ++ +A+ IAQ I
Sbjct: 488 GMMIRIIPKNRRIPYGYNYYLNEVRKMRSLLSGGTNANTFIRSVKIKYVYQSASPIAQDI 547
Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173
+ QL FR + V++ R G G+++ GRL GAE++RTEC G+
Sbjct: 548 SFQLRGGKRSFRSIFFQIVRNLPLVMPQLRKGVGGIRICRPGRLKGAEIARTECREYGKP 607
Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
T R IDY A T YG G+KV++
Sbjct: 608 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 639
>gi|302748559|gb|ADL63760.1| ribosomal protein S3 [Ascarina sp. Thien 500]
Length = 483
Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 46/173 (26%), Positives = 77/173 (44%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ + I + + G +++K+R LSN T
Sbjct: 314 KVMELIEKFIDLGGIGEF---LKGIEMMIEIILRNRRIPYGYNSYLNEVQKMRSLLSNRT 370
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ Q + FR + V+ M G +G+++
Sbjct: 371 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKTISFRSIFSQIVKDIPLVMPKGVEGIRI 430
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 431 CCSGRSEGAEIARTECGKYGKTSRNVFYQKIDYAPAEVSTRYGISGVKVRISY 483
>gi|302748822|gb|ADL63891.1| ribosomal protein S3 [Iris sp. Qiu 95091]
Length = 476
Score = 98.9 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 47/170 (27%), Positives = 81/170 (47%), Gaps = 4/170 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ + I+ II+ + R +++K+R LSN TN+
Sbjct: 308 KVMELIEKFIDLGGIGEF-IKGIEMMIEIILRNRRIPYRDNSYLKEVQKMRSFLSNRTNT 366
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQL-ERRVVFRRAMKRAVQSAMRFGA--DGVKVIAS 154
+ ++ +A+LIAQ I+ Q +++ FR + ++ R G+++ S
Sbjct: 367 NTLIESVKIKSVYQSASLIAQDISFQPRKKKRSFRSIFSKLLKDIPRRPKVVGGIRICCS 426
Query: 155 GRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
GR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 427 GRSRGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGISGVKVRISF 476
>gi|130076564|gb|ABO31940.1| ribosomal protein S3 [Corylopsis glabrescens f. gotoana]
Length = 480
Score = 98.9 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 49/180 (27%), Positives = 85/180 (47%), Gaps = 10/180 (5%)
Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIR 88
L+ +D I E ++ + G+ ++ I + + + G +++K+R
Sbjct: 301 KLMGKDKVI-ELIEKLINLGGIGEL---IKGIEMMIEIILRKRRIPYGYNFYLNEVKKMR 356
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRF 144
LSN TN+ + ++ +A+ IAQ I+ + +R FR + V+ M+
Sbjct: 357 SLLSNRTNAITLIESVKIKSVYQSASTIAQDISLKPRNKRRSFRSIFSKIVKDIPLVMKK 416
Query: 145 GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
G G+++ SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 417 GVGGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 476
>gi|130076572|gb|ABO31944.1| ribosomal protein S3 [Hamamelis mollis]
Length = 485
Score = 98.9 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 49/179 (27%), Positives = 85/179 (47%), Gaps = 10/179 (5%)
Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIR 88
L+ +D I E ++ + G+ ++ I + + + G +++K+R
Sbjct: 311 KLMGKDKVI-ELIEKFINLGGIGEL---IKGIEMMIEIILRKRRIPYGYNFYLNEVKKMR 366
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRF 144
LSN TN+ + ++ +A+ IAQ I+ + +R FR + V+ M+
Sbjct: 367 SLLSNRTNANTLIESVKIKSVYQSASTIAQDISLKPRNKRRSFRSIFSKIVKDIPLVMKK 426
Query: 145 GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
G G+++ SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 427 GVGGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWIS 485
>gi|67527620|ref|XP_661691.1| hypothetical protein AN4087.2 [Aspergillus nidulans FGSC A4]
gi|40739785|gb|EAA58975.1| hypothetical protein AN4087.2 [Aspergillus nidulans FGSC A4]
gi|259481325|tpe|CBF74736.1| TPA: hypothetical protein similar to 40s ribosomal protein s3
(Eurofung) [Aspergillus nidulans FGSC A4]
Length = 264
Score = 98.9 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 42/206 (20%), Positives = 79/206 (38%), Gaps = 16/206 (7%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRI-IVYSARPGLIIGKKGT 82
A G Y L E+ Q L + G + + + T I ++ G++
Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDISTTHTQEVLGEQGRRIR 68
Query: 83 DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAM 142
++ + +K + + L +V ++A +S+ +L + RRA ++ M
Sbjct: 69 ELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIM 128
Query: 143 RFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKV 200
GA G +V+ SG+L A +++ + +G + Q + ID T G GIKV
Sbjct: 129 ESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKEFIDSATRHVLLRQGVLGIKV 187
Query: 201 YVSLRDEVSDSDSTIPAAEHRVVEKD 226
+ SD A + +
Sbjct: 188 KIMRG-----SDPEGKAGPQKTLPDS 208
>gi|302748935|gb|ADL63947.1| ribosomal protein S3 [Peltanthera floribunda]
Length = 475
Score = 98.9 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 5/167 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + + +++K+R LSN TN+
Sbjct: 310 KVMELIEKFIDLGRIGEL-IKGIEMMIEIILRNRKIPYGYNSYLNEVKKMRSLLSNRTNT 368
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V++ M+ +G+++
Sbjct: 369 NTLMESVKIKSVYQSASPIAQDISFQLRTKTRSFRSIFSKIVKNIPLVMKKWVEGIRICC 428
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200
SGR GAE++RTEC G+ IDY A T YG G+KV
Sbjct: 429 SGRSEGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGILGVKV 475
>gi|242218874|ref|XP_002475223.1| 40S ribosomal protein S3 [Postia placenta Mad-698-R]
gi|220725609|gb|EED79589.1| 40S ribosomal protein S3 [Postia placenta Mad-698-R]
Length = 262
Score = 98.9 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 38/188 (20%), Positives = 76/188 (40%), Gaps = 10/188 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
++ L + G + + TH II+ + ++G+KG I ++ +K +
Sbjct: 23 DFFTRELSEEGYSGCDVRVTHARTEIIIRATHTQEVLGEKGRRIRELTALVQKRFKFPEN 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V ++A +S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
A +++ + +G + Q +DY G GIKV + +V
Sbjct: 143 RAA-RAKSMKFTDGFMIHSGQPALDFVDYAVRHVMLRQGVLGIKVKIMKGWDPEGQVGPR 201
Query: 212 DSTIPAAE 219
+ +
Sbjct: 202 KPLPDSVQ 209
>gi|226495937|ref|NP_001149150.1| LOC100282772 [Zea mays]
gi|195625100|gb|ACG34380.1| 40S ribosomal protein S3 [Zea mays]
gi|223947389|gb|ACN27778.1| unknown [Zea mays]
gi|223972753|gb|ACN30564.1| unknown [Zea mays]
Length = 229
Score = 98.9 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 10/179 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E L L + G + + + T II+ + R ++G+KG I ++ + N +
Sbjct: 23 EMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPEN 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L
Sbjct: 83 GVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRYVMESGAKGCEVIVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL----RDEVSD 210
A+ +++ + +G + Q + +ID G GIKV + L + +V
Sbjct: 143 R-AQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGP 200
>gi|121543809|gb|ABM55569.1| putative ribosomal protein S3 [Maconellicoccus hirsutus]
Length = 248
Score = 98.9 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 44/190 (23%), Positives = 82/190 (43%), Gaps = 13/190 (6%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E+L L + G + + I T II+ + R ++G+KG I ++ +K +
Sbjct: 23 EFLMRELAEDGYSGVQIRVTPTRTEIIIMATRTQNVLGEKGRRIRELTSVVQKRFKFPDG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
I L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
G + +++ +++G + + + +DY T G GIKV + D T
Sbjct: 143 RG-QRAKSMKFVDGLM-IHSGEPCVDYVDTATRHVLLRQGVLGIKVKIM-----LPWDPT 195
Query: 215 IPAAEHRVVE 224
+ +
Sbjct: 196 GKNGPKKPLP 205
>gi|302749033|gb|ADL63996.1| ribosomal protein S3 [Siparuna brasiliensis]
Length = 476
Score = 98.9 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 49/169 (28%), Positives = 81/169 (47%), Gaps = 5/169 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + R +++KIR LSN TN+
Sbjct: 310 KVMELIEKFIDLGRIGEL-IKGIKMMIEIILRNRRIPYGYNYYLNEVQKIRSLLSNRTNT 368
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSA---MRFGADGVKVIAS 154
+ + ++ +A+ IAQ I+ Q R FR + V+ M G +G+++ S
Sbjct: 369 DTFIESVKIKSVYQSASPIAQDISFQPRTRS-FRSIFSQIVKDIPIVMPKGVEGIRICCS 427
Query: 155 GRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
GR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 428 GRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 476
>gi|302748599|gb|ADL63780.1| ribosomal protein S3 [Buxus sempervirens]
Length = 478
Score = 98.9 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 80/172 (46%), Gaps = 9/172 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E + + G+ ++ I + + + G +++K+R LSN T
Sbjct: 310 KVMELIDKFIDLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEVKKMRSLLSNRT 366
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM----KRAVQSAMRFGADGVKV 151
N+ + ++ +A+ IAQ I+ Q + RA+ + + M+ G +G+++
Sbjct: 367 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRAIFSKIVKDIPLVMQKGVEGIRI 426
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGRL GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 427 CCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 478
>gi|242080689|ref|XP_002445113.1| hypothetical protein SORBIDRAFT_07g004290 [Sorghum bicolor]
gi|241941463|gb|EES14608.1| hypothetical protein SORBIDRAFT_07g004290 [Sorghum bicolor]
Length = 228
Score = 98.9 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 43/179 (24%), Positives = 79/179 (44%), Gaps = 10/179 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E L L + G + + + T II+ + R ++G+KG I ++ + N +
Sbjct: 23 EMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPEN 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L
Sbjct: 83 GVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL----RDEVSD 210
A+ +++ + +G + Q + +ID G GIKV + L + +V
Sbjct: 143 R-AQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGP 200
>gi|302748772|gb|ADL63866.1| ribosomal protein S3 [Gyrocarpus sp. Chase 317]
Length = 478
Score = 98.9 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 9/172 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ I + + + G +++KIR LSN T
Sbjct: 310 KVMELIEKFIDLGGIGEL---IKGIEMMIEIILRKRIIPYGYNSYLNEVQKIRSLLSNRT 366
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERR-VVFRRAMKRA---VQSAMRFGADGVKV 151
N+ + ++ +A+ IAQ I+ Q ++ FR + +Q M G +G+++
Sbjct: 367 NTNTLIESVKIKSVYQSASPIAQDISFQPRKKPRSFRSIFSKIVKDIQLVMPKGVEGIRI 426
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RT C G+ IDY A T YG G+KV +S
Sbjct: 427 CCSGRSGGAEIARTFCGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 478
>gi|281353139|gb|EFB28723.1| hypothetical protein PANDA_003327 [Ailuropoda melanoleuca]
Length = 233
Score = 98.9 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 13 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 72
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 73 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 132
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 133 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 191
Query: 212 DST 214
Sbjct: 192 KPL 194
>gi|326493582|dbj|BAJ85252.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510059|dbj|BAJ87246.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 227
Score = 98.9 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 42/195 (21%), Positives = 83/195 (42%), Gaps = 10/195 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E L L + G + + + T II+ + R ++G+KG I ++ + N +
Sbjct: 23 EMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPEN 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L
Sbjct: 83 GVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL----RDEVSDS 211
A+ +++ + +G + Q + +ID G GIKV + L + ++ +
Sbjct: 143 R-AQRAKSMKFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLGPT 201
Query: 212 DSTIPAAEHRVVEKD 226
+++
Sbjct: 202 TPLPDLVTIHPPKEE 216
>gi|108709466|gb|ABF97261.1| 40S ribosomal protein S3, putative, expressed [Oryza sativa
Japonica Group]
Length = 205
Score = 98.9 bits (245), Expect = 5e-19, Method: Composition-based stats.
Identities = 42/194 (21%), Positives = 82/194 (42%), Gaps = 10/194 (5%)
Query: 42 YLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SE 98
L L + G + + + T II+ + R ++G+KG I ++ + N +
Sbjct: 1 MLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPENG 60
Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLN 158
+ L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L
Sbjct: 61 VELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLR 120
Query: 159 GAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL----RDEVSDSD 212
A+ +++ + +G + Q + +ID G GIKV + L + +V +
Sbjct: 121 -AQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGPTT 179
Query: 213 STIPAAEHRVVEKD 226
+++
Sbjct: 180 PLPDLVTIHAPKEE 193
>gi|115453877|ref|NP_001050539.1| Os03g0577000 [Oryza sativa Japonica Group]
gi|38093738|gb|AAR10854.1| putative ribosomal protein [Oryza sativa Japonica Group]
gi|108709465|gb|ABF97260.1| 40S ribosomal protein S3, putative, expressed [Oryza sativa
Japonica Group]
gi|113549010|dbj|BAF12453.1| Os03g0577000 [Oryza sativa Japonica Group]
gi|125544608|gb|EAY90747.1| hypothetical protein OsI_12347 [Oryza sativa Indica Group]
gi|125586911|gb|EAZ27575.1| hypothetical protein OsJ_11524 [Oryza sativa Japonica Group]
gi|215686413|dbj|BAG87698.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708682|dbj|BAG93951.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 228
Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 43/195 (22%), Positives = 83/195 (42%), Gaps = 10/195 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E L L + G + + + T II+ + R ++G+KG I ++ + N +
Sbjct: 23 EMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPEN 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L
Sbjct: 83 GVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL----RDEVSDS 211
A+ +++ + +G + Q + +ID G GIKV + L + +V +
Sbjct: 143 R-AQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGPT 201
Query: 212 DSTIPAAEHRVVEKD 226
+++
Sbjct: 202 TPLPDLVTIHAPKEE 216
>gi|328541192|gb|AEB21820.1| ribosomal protein S3 [Telaranea trilobata]
Length = 375
Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFR 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369
Query: 199 KVYVSL 204
KV+ S
Sbjct: 370 KVWXSY 375
>gi|302748768|gb|ADL63864.1| ribosomal protein S3 [Guaiacum officinale]
Length = 470
Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 8/168 (4%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E+++ + G+ ++ R I + + G +++K+R LSN T
Sbjct: 306 KVMEFIEKFIDLGGIGEL---RKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNKT 362
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRA---MKRAVQSAMRFGADGVKVI 152
+ + ++ +A+ IAQ I+ +L FR + +A+ M+ +G+++
Sbjct: 363 KTNTLIESVKIKSVYQSASPIAQDISLKLRNTRSFRSILSQIVKAIPLGMKKRVEGIRIC 422
Query: 153 ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200
SGRL GAE++RTEC G+ IDY A T YG G+KV
Sbjct: 423 CSGRLEGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGILGVKV 470
>gi|28630189|gb|AAN77883.1| ribosomal protein S3 [Myxine glutinosa]
Length = 211
Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 36/183 (19%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E+L L + G + + I T +I+ + R ++G++G I ++ +K +
Sbjct: 13 EFLTRELAEDGYSGVEIRVTPSRTEVIILATRTQNVLGEEGRRIRELTSVIQKRFDFPEG 72
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A +S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 73 NVELYAEKVANRGLCAIAQCESLRYKLLGGLAVRRACYGVLRFIMENGAKGCEVVVSGKL 132
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + ++
Sbjct: 133 RG-QRAKSMKFVDGLMIHSGDPVNHYVDMAIRHVLLRQGVLGIKVKIMRPWDPSGKIGPK 191
Query: 212 DST 214
Sbjct: 192 KPL 194
>gi|15920635|ref|NP_376304.1| 30S ribosomal protein S3P [Sulfolobus tokodaii str. 7]
gi|27734524|sp|Q975I7|RS3_SULTO RecName: Full=30S ribosomal protein S3P
gi|15621418|dbj|BAB65413.1| 225aa long hypothetical 30S ribosomal protein S3 [Sulfolobus
tokodaii str. 7]
Length = 225
Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 55/186 (29%), Positives = 89/186 (47%), Gaps = 4/186 (2%)
Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN 96
+ + EYL A A + I +T R+I+Y+ RP LIIGK G I+++ + L
Sbjct: 16 VMVDEYLAKQFYNAEYAGVEIVKTPIGTRVIIYAGRPALIIGKGGKTIKQLAQMLERYFG 75
Query: 97 -SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155
++V V PE+NA ++A +A LE+ FRRA ++ M GA G +VI SG
Sbjct: 76 LDNPQITVTSVENPELNARVMAFRLAIALEKGYHFRRAAFITIRRIMNAGALGAEVIISG 135
Query: 156 RLNGAELSRTECYLEGRVPLQT--LRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
+L +E ++ E EG V L +D A+A G G+++ ++ + D
Sbjct: 136 KLT-SERAKYEKLKEGVVYKSGAFLDKIVDRAVAIAMLKPGVYGVEILITKPMKSVDKIE 194
Query: 214 TIPAAE 219
+
Sbjct: 195 LREQPK 200
>gi|49258823|pdb|1S1H|C Chain C, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From
Yeast Obtained By Docking Atomic Models For Rna And
Protein Components Into A 11.7 A Cryo-Em Map. This File,
1s1h, Contains 40s Subunit. The 60s Ribosomal Subunit Is
In File 1s1i
Length = 192
Score = 98.5 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 75/186 (40%), Gaps = 13/186 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ L + G + + + T +I+ + R ++G+ G
Sbjct: 12 ADGVFYAEL-------NEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLGENGRR 64
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K I L V ++A A+S+ +L + RRA V+
Sbjct: 65 INELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVRY 124
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A ++ + +G + Q + ID T G GI
Sbjct: 125 VMESGAKGCEVVVSGKLRAA-RAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQGVLGI 183
Query: 199 KVYVSL 204
KV +
Sbjct: 184 KVKIMR 189
>gi|124300789|dbj|BAF45890.1| ribosomal protein S3 [Solea senegalensis]
Length = 245
Score = 98.5 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 39/196 (19%), Positives = 81/196 (41%), Gaps = 10/196 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201
Query: 212 DSTIPAAEHRVVEKDS 227
+++S
Sbjct: 202 KPLPDHVSIVEPKEES 217
>gi|302748983|gb|ADL63971.1| ribosomal protein S3 [Quillaja saponaria]
Length = 449
Score = 98.5 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 47/172 (27%), Positives = 83/172 (48%), Gaps = 9/172 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E + + G+ ++ I + + + G +++K+R LSN T
Sbjct: 281 KVMELIDKFIDLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEVKKMRSLLSNRT 337
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQL-ERRVVFRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ +L ++R FR + V+ M+ G +G+++
Sbjct: 338 NTNTLIESVKIKSVYQSASPIAQDISFKLRKKRRSFRSIFSKIVKDIPLVMKKGVEGIRI 397
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RTEC G+ IDY +A T YG G+KV +S
Sbjct: 398 CCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYASAEVSTRYGISGVKVXIS 449
>gi|197101391|ref|NP_001127020.1| 40S ribosomal protein S3 [Pongo abelii]
gi|75061590|sp|Q5R465|RS3_PONAB RecName: Full=40S ribosomal protein S3
gi|55733547|emb|CAH93451.1| hypothetical protein [Pongo abelii]
gi|62897657|dbj|BAD96768.1| ribosomal protein S3 variant [Homo sapiens]
Length = 243
Score = 98.5 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 39/183 (21%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L EV + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEEVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|272716634|gb|ACZ95625.1| ribosomal protein S3 [Glyptostrobus pensilis]
Length = 607
Score = 98.5 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 67/152 (44%), Gaps = 9/152 (5%)
Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + + G ++ K+R LS TN+ + ++ +A+ IAQ I
Sbjct: 454 GMMIRIIPKNRRIPYGYNYYLNEVRKMRSLLSGGTNANTFIGSVKIKSVYQSASPIAQDI 513
Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173
+ QL FR + V+ R G G+++ GRL GAE++RTEC G+
Sbjct: 514 SFQLRDGTRSFRSIFWKIVRDISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKT 573
Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
T R IDY A T YG G+KV++
Sbjct: 574 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 605
>gi|269115422|gb|ACZ26288.1| putative ribosomal protein S3 [Mayetiola destructor]
Length = 250
Score = 98.5 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 40/183 (21%), Positives = 78/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + I T II+ + + ++G+KG I ++ +
Sbjct: 23 EFLTRQLAEDGYSGVEIRVTPTRTEIIIMATKTLNVLGEKGRRIRELTAVVQKRFGFAPG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 TVELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + A++D T G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPCNAYVDSATRHVLLRQGVLGIKVKIMLPYDPNGKIGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|302748973|gb|ADL63966.1| ribosomal protein S3 [Polygonum sp. Qiu 94110]
Length = 474
Score = 98.5 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 47/167 (28%), Positives = 84/167 (50%), Gaps = 5/167 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ + ++ + G+ ++ I+ II+ + R +++K+R LSN T +
Sbjct: 309 KVMKLIEKLIDLGGIEEL-IKGIEMMIEIILKNRRIPYGYNFYLNEVKKMRSLLSNRTKT 367
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLER-RVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q ++ R FR ++ V+ M+ G +G+++
Sbjct: 368 NTLMESVKIKSVYQSASPIAQDISFQPKKKRRSFRSIFRKIVKDIPLGMKNGIEGIRICC 427
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200
SGRL GAE++RTEC G+ IDY +A T YG G+KV
Sbjct: 428 SGRLAGAEIARTECGKYGKTSCNVFNKKIDYASAEVSTRYGILGVKV 474
>gi|302749081|gb|ADL64020.1| ribosomal protein S3 [Tetracentron sinense]
Length = 478
Score = 98.5 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 9/172 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E + + G+ ++ I + + + G +++K+R LSN T
Sbjct: 310 KVMELIDKFIDLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEVKKMRSLLSNRT 366
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++
Sbjct: 367 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIPLVMKKGVEGIRI 426
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 427 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 478
>gi|302748521|gb|ADL63741.1| ribosomal protein S3 [Agave attenuata]
Length = 481
Score = 98.5 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 9/173 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + + R I + + G +++K+R LS T
Sbjct: 312 KVMELIEKFIDLDSTGEF---RKGIEMMIEIILRNRRIPYGYNSYLNEVQKMRSFLSERT 368
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQ---SAMRFGADGVKV 151
N+E + ++ +A+LIAQ I+ Q FR + V+ M G +G+++
Sbjct: 369 NTETLIESVKIKSVYQSASLIAQDISFQPRNNQISFRSVFSKIVKDIPLIMPKGVEGIRI 428
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 429 CCSGRLGGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRISY 481
>gi|272716556|gb|ACZ95567.1| ribosomal protein S3 [Amentotaxus argotaenia]
Length = 713
Score = 98.5 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 44/149 (29%), Positives = 66/149 (44%), Gaps = 6/149 (4%)
Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + + G ++ K+R LS TN+ + ++ +A+ IAQ I
Sbjct: 565 GMMIGIIPKNRRIPYGYNYYLNEVRKMRSLLSGGTNANTSIGSVKIESVYQSASPIAQDI 624
Query: 121 AQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
+ QL FR R V+ M G G+++ GRL GAE++RTEC G+
Sbjct: 625 SSQLRDGTRSFRSIFGRIVRDIPLVMPKGVGGIRICCPGRLKGAEIARTECREYGKTSCN 684
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
R IDY A T YG G+KV++
Sbjct: 685 AFRHQIDYAYAKVSTRYGILGVKVWIPFP 713
>gi|113170485|ref|YP_717276.1| Rps3 [Ostreococcus tauri]
gi|112806892|emb|CAL36398.1| unnamed protein product [Ostreococcus tauri]
Length = 277
Score = 98.5 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 30/167 (17%), Positives = 67/167 (40%), Gaps = 2/167 (1%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIH 100
E L+ L + + ++++ ++ K + +
Sbjct: 112 ETLKKKLVFQSLLRNNLQKSTTLHLTNLFEQTRHKTNALKFYA-NHLEAVSQQYFKTATQ 170
Query: 101 LSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAM-RFGADGVKVIASGRLNG 159
++ + +A +A+ ++ LER+ ++ +G K+ SGRL G
Sbjct: 171 WEPVKLQEFTKSAQFVAEYVSHALERQKPVKQIFSSVQTLLKKDPNVEGFKISCSGRLQG 230
Query: 160 AELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
E+++ E + G++ L + +DY A A T +G G+KV++ +D
Sbjct: 231 VEMAKIETFKFGKISLHVFTSKVDYAEARALTTFGILGVKVWICYKD 277
Score = 64.6 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 59/150 (39%), Gaps = 20/150 (13%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGV--AKILIE 58
MGQKI+P+ RL N ++ + W+++ Y +H+ L+++ +L Q G K +
Sbjct: 1 MGQKISPVALRLQTNKSFQASWYSQ-KLYAEGVHKQLQVQNFLHDVFHQVGTKATKTHVV 59
Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA- 117
+T +I + P L + + L + +
Sbjct: 60 QTPGALKIHTFFCSPRLF--------------DQKLAKKTMSLKPTHFFQHQRTTQWQFL 105
Query: 118 --QSIAQQLERRVVFRRAMKRAVQSAMRFG 145
Q + L++++VF+ ++ +Q +
Sbjct: 106 SNQMHWETLKKKLVFQSLLRNNLQKSTTLH 135
>gi|302748850|gb|ADL63905.1| ribosomal protein S3 [Liriodendron chinense]
Length = 454
Score = 98.5 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 47/170 (27%), Positives = 79/170 (46%), Gaps = 5/170 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + + I+ II+ + R +++KIR LSN TN+
Sbjct: 286 KVMELIEKFIDLGRIGEF-IKGIEMMIEIILRNRRIPYGYNSYLNEVQKIRSLLSNRTNT 344
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + +Q M G +G+++
Sbjct: 345 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIQLVMPKGVEGIRICC 404
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RT+C G+ IDY A T YG G+KV +S
Sbjct: 405 SGRSEGAEIARTKCGKYGKTSRNVFHQKIDYAPAEVSTRYGISGVKVRIS 454
>gi|302748743|gb|ADL63852.1| ribosomal protein S3 [Gaiadendron sp. Munoz et al. 102]
Length = 468
Score = 98.5 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 5/167 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 303 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNYYLNEVKKMRSLLSNRTNT 361
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++
Sbjct: 362 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDILLVMKKGVEGIRICC 421
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200
SGRL GAE++RTEC G+ IDY A T YG G+KV
Sbjct: 422 SGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKV 468
>gi|272716614|gb|ACZ95610.1| ribosomal protein S3 [Callitris macleayana]
Length = 632
Score = 98.5 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 9/152 (5%)
Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + + G ++ K+R LS TN+ + ++ +A+ IAQ I
Sbjct: 479 GMMIRIIPTNRKIPYGYNYYLNEVRKMRSLLSGGTNANTFIRSVKIKSVYQSASPIAQDI 538
Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173
+ QL FR + V++ R G G+++ GRL GAE++RTEC G+
Sbjct: 539 SFQLRDGTRSFRSIFFQIVRNISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKP 598
Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
T R IDY A T YG G+KV++
Sbjct: 599 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 630
>gi|25987150|gb|AAN75747.1|AF319171_2 ribosomal protein S3 [Magnolia x soulangeana]
Length = 523
Score = 98.5 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 46/171 (26%), Positives = 80/171 (46%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + R +++KIR LSN TN+
Sbjct: 350 KVMELIEKFIDLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVQKIRSLLSNRTNT 408
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + ++ M G +G+++
Sbjct: 409 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIKLVMPKGVEGIRICC 468
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RT+C G+ IDY A T YG G+KV +S
Sbjct: 469 SGRSEGAEIARTKCGKYGKTSRNVFHQKIDYAPAEVSTRYGISGVKVRISY 519
Score = 36.9 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 17/75 (22%), Positives = 31/75 (41%), Gaps = 7/75 (9%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54
M +K NPI RL +N + + F+ YG +++D+ +R Y + +
Sbjct: 1 MARKGNPISVRLDLNRSSDPSRFSDYY-YGKSVYQDVNLRSYFGSIRPPTRLTFGFRLGR 59
Query: 55 ILIERTHKNCRIIVY 69
+I K I +
Sbjct: 60 CIILHFPKRTFIHFF 74
>gi|299755573|ref|XP_002912114.1| 40S ribosomal protein S3 [Coprinopsis cinerea okayama7#130]
gi|298411286|gb|EFI28620.1| 40S ribosomal protein S3 [Coprinopsis cinerea okayama7#130]
Length = 258
Score = 98.5 bits (244), Expect = 7e-19, Method: Composition-based stats.
Identities = 38/188 (20%), Positives = 76/188 (40%), Gaps = 10/188 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E+ L + G + + TH II+ + ++G+KG I ++ +K +
Sbjct: 23 EFFTRELAEEGYSGCDVRVTHARTEIIIRATHTQEVLGEKGRRIRELTALVQKRFKFPEN 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V ++A +S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SLELYAEKVQYRGLSAIAQCESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
A +++ + +G + Q +DY G GIKV + ++
Sbjct: 143 RAA-RAKSMKFTDGFMIHSGQPALEFVDYAVRHVLLRQGVLGIKVKIMKGYDREGQLGPR 201
Query: 212 DSTIPAAE 219
+ +
Sbjct: 202 KPLPDSVQ 209
>gi|296040600|gb|ADG85268.1| ribosomal protein S3 [Silene latifolia]
Length = 432
Score = 98.5 bits (244), Expect = 7e-19, Method: Composition-based stats.
Identities = 49/172 (28%), Positives = 89/172 (51%), Gaps = 7/172 (4%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ + ++ + G+ + LI+ II+ + R +++K+R LSN T +
Sbjct: 259 KVMKLIEKFIDLGGI-RELIKGIEMMIEIILKNRRIPYGYSSYLNEVQKMRSLLSNRTKT 317
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-----FRRAMKRAVQSAMRFGADGVKVI 152
+ ++ +A+LIAQ I+ QL+ + F + +K+ + M+ G +G+++
Sbjct: 318 NTLIESVKITSVYQSASLIAQDISFQLKNQSREFSSIFSKIVKK-IPLVMKKGIEGIRIC 376
Query: 153 ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ L DY +A+ T YG G+KV++S
Sbjct: 377 CSGRLQGAEIARTECGKYGKTSCNVLHQKRDYASALVSTRYGIVGVKVWISY 428
>gi|302748531|gb|ADL63746.1| ribosomal protein S3 [Alnus incana subsp. rugosa]
Length = 499
Score = 98.5 bits (244), Expect = 7e-19, Method: Composition-based stats.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 9/170 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSE 98
E ++ + G+ ++ I + + G +++K+R LSN T +
Sbjct: 328 ELIEKFIDLGGIGEL---IKGIEMMIEIILRNRIIPYGYNSYLNEVKKMRSLLSNRTKTN 384
Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIAS 154
+ ++ +A+ IAQ I+ +L + FR + + + M+ G +G+++ S
Sbjct: 385 TLIESVKIKSVYQSASPIAQDISFELRNKTRSFRSIYSKIVKDIPLVMKKGVEGIRICCS 444
Query: 155 GRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
GR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 445 GRSEGAEIARTECGKYGKTSRNIFNQKIDYAPAEVSTRYGILGVKVWISY 494
>gi|281500809|pdb|3JYV|C Chain C, Structure Of The 40s Rrna And Proteins And PE TRNA FOR
EUKARYOTIC Ribosome Based On Cryo-Em Map Of Thermomyces
Lanuginosus Ribosome At 8.9a Resolution
Length = 188
Score = 98.5 bits (244), Expect = 7e-19, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 75/186 (40%), Gaps = 13/186 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ L + G + + + T +I+ + R ++G+ G
Sbjct: 8 ADGVFYAEL-------NEFFTRELAEEGYSGVEVRVTPTKTEVIIRATRTQDVLGENGRR 60
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K I L V ++A A+S+ +L + RRA V+
Sbjct: 61 INELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVRY 120
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A ++ + +G + Q + ID T G GI
Sbjct: 121 VMESGAKGCEVVVSGKLRAA-RAKAMKFADGFLIHSGQPVNDFIDTATRHVLMRQGVLGI 179
Query: 199 KVYVSL 204
KV +
Sbjct: 180 KVKIMR 185
>gi|272716536|gb|ACZ95552.1| ribosomal protein S3 [Fitzroya cupressoides]
Length = 639
Score = 98.1 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 67/152 (44%), Gaps = 9/152 (5%)
Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + + G ++ K+R LS TN+ + ++ +A+ IAQ I
Sbjct: 486 GMMIRIIPKNRKIPYGYNYYLNEVRKMRSLLSGGTNANTFIRSVKIKSVYQSASPIAQDI 545
Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173
+ QL FR + V+ R G G+++ GRL GAE++RTEC G+
Sbjct: 546 SFQLRDGTRSFRSIFLKIVRDISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKT 605
Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
T R IDY A T YG G+KV++
Sbjct: 606 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 637
>gi|255550145|ref|XP_002516123.1| 40S ribosomal protein S3, putative [Ricinus communis]
gi|223544609|gb|EEF46125.1| 40S ribosomal protein S3, putative [Ricinus communis]
Length = 234
Score = 98.1 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 47/186 (25%), Positives = 83/186 (44%), Gaps = 13/186 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E L L + G + + + T II+ + R ++G+KG
Sbjct: 13 ADGVFYAEL-------NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 65
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K N ++ + L +V + A A+S+ +L + RRA ++
Sbjct: 66 IRELTSVVQKRFNFPDNSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +VI SG+L A+ +++ + +G + Q ++ +ID G GI
Sbjct: 126 IMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGI 184
Query: 199 KVYVSL 204
KV + L
Sbjct: 185 KVKIML 190
>gi|194212272|ref|XP_001917735.1| PREDICTED: similar to 40S ribosomal protein S3 [Equus caballus]
Length = 243
Score = 98.1 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 39/183 (21%), Positives = 78/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V K + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVAKRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFTMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVCHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|148684446|gb|EDL16393.1| ribosomal protein S3, isoform CRA_h [Mus musculus]
Length = 223
Score = 98.1 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 42/194 (21%), Positives = 85/194 (43%), Gaps = 12/194 (6%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVS---LRDEVSDSD 212
G + +++ +++G + + ++D G GIKV + +DE+
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIIIVEPKDEILP-- 199
Query: 213 STIPAAEHRVVEKD 226
T P +E + + +
Sbjct: 200 -TTPISEQKGGKPE 212
>gi|302749113|gb|ADL64036.1| ribosomal protein S3 [Viola sp. Qiu 95018]
Length = 508
Score = 98.1 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 326 KVMELIEKFINLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNKTNT 384
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRA---VQSAMRFGADGVKVIA 153
+ ++ +A+LIAQ I+ QL ++ FR + + M+ G +G+++
Sbjct: 385 NTLIESVKIQSIYQSASLIAQEISFQLRNKKRSFRSIFSKIEKDIPLVMKKGVEGIRICC 444
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RT+C G+ IDY A T YG G+KV++S
Sbjct: 445 SGRLKGAEIARTKCGKSGKPSRNIFNQKIDYAPAEVSTRYGISGVKVWISY 495
>gi|288191257|gb|ADC43981.1| ribosomal protein S3 [Hybanthus concolor]
Length = 501
Score = 98.1 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 83/171 (48%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + + I+ II+ + R +++K+R LSN TN+
Sbjct: 326 KVMELIEKFINLGRIGEF-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNKTNT 384
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRA---VQSAMRFGADGVKVIA 153
+ ++ +A+LIAQ I+ QL ++ FR + + M+ +G+++
Sbjct: 385 NTLIESVKIQSVYQSASLIAQEISFQLRNKKGSFRSIFSKIEKDIPLVMKKEVEGIRICC 444
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RT+C G+ IDY A T YG G+KV++S
Sbjct: 445 SGRLKGAEIARTKCGKSGKPSRNIFNQKIDYAPAEVSTRYGISGVKVWISY 495
>gi|323450925|gb|EGB06804.1| hypothetical protein AURANDRAFT_60177 [Aureococcus anophagefferens]
Length = 231
Score = 98.1 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 46/202 (22%), Positives = 82/202 (40%), Gaps = 18/202 (8%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E L L + G A + + T II+ + R ++G+KG
Sbjct: 12 ADGLFYAEL-------NELLTRELAEDGYAGVEVRVTPLRTEIIIRATRTQNVLGEKGQR 64
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + + L V + A A+S+ +L + RRA V+
Sbjct: 65 IRELTSVVQKRFHFQDGAVELYAERVANRGLCAQAQAESLKYKLLGGLAVRRACYGVVRF 124
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA GV+V+ SG+L A+ ++ + +G + + R ++D G G+
Sbjct: 125 VMESGAKGVEVVVSGKLR-AQRAKAMKFTDGYMIKTGHSKREYVDSAVRHVLMRQGVLGV 183
Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220
KV + D++
Sbjct: 184 KVSIM-----LPHDASGKTGPK 200
>gi|167519583|ref|XP_001744131.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777217|gb|EDQ90834.1| predicted protein [Monosiga brevicollis MX1]
Length = 252
Score = 98.1 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 43/189 (22%), Positives = 77/189 (40%), Gaps = 11/189 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK---IRKKLSNMTNS 97
E L + G A + I++T K+ I++ + R ++G+KG I + +K
Sbjct: 24 ELFMRELAEDGYAGVEIKKTPKSTEIVILATRTQHVLGEKGRRIRELTAFIQKRFGFQKD 83
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
E+ L +V + A +++ +L + RRA V+ M GA G +VI SG+L
Sbjct: 84 EVELFAEKVANRGLCAVAQCENLRYKLTGGLAVRRACYGVVRFVMESGAKGCEVIVSGKL 143
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
A+ ++ + +G + R +ID G GIKV + D +
Sbjct: 144 R-AQRAKAMKFGDGFMISSGNPTREYIDTAVRHVPMRQGMIGIKVKIM-----LPHDPSG 197
Query: 216 PAAEHRVVE 224
+
Sbjct: 198 KTGPKAPLP 206
>gi|302748911|gb|ADL63935.1| ribosomal protein S3 [Nyssa sylvatica]
Length = 473
Score = 98.1 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 48/167 (28%), Positives = 81/167 (48%), Gaps = 5/167 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 308 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 366
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 367 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 426
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200
SGR GAE++RTEC G+ IDY A T YG G+KV
Sbjct: 427 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKV 473
>gi|302749119|gb|ADL64039.1| ribosomal protein S3 [Xanthorrhoea quadrangulata]
Length = 474
Score = 98.1 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 79/171 (46%), Gaps = 6/171 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ + + II+ + R +++K+R LSN TN+
Sbjct: 303 KVMELIEKFIDLGGIG--EFIKGIEMIEIILRNRRIPYGYNSYLNEVQKMRSFLSNRTNT 360
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQ---SAMRFGADGVKVIA 153
+ ++ +A+LI Q I+ Q FR + V+ M G +G+++
Sbjct: 361 NTLMESVKIKSVYQSASLIVQDISFQPRNNQISFRSIFSKIVKDIPLIMPKGVEGIRICC 420
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ I+Y A T YG G+KV +S
Sbjct: 421 SGRLGGAEIARTECGKYGKTSRNVFHHKINYAPAEVSTRYGISGVKVRISY 471
>gi|1542890|emb|CAA45192.1| ribosomal protein S3 [Brassica napus]
Length = 530
Score = 98.1 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 48/185 (25%), Positives = 88/185 (47%), Gaps = 9/185 (4%)
Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIR 88
LL +D K+ E ++ G+ ++ + I + + G+ G +++K+R
Sbjct: 343 NLLGKD-KVMELIEKFKDLGGIEEL---IKVIDMMIEIILRKRGIPYGYNSYFNEVQKMR 398
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSAMRFGAD 147
LSN TN++ + ++ +A+LIAQ I+ QL+ +R F + V+ + +
Sbjct: 399 SFLSNRTNTKTLIESVKIKSVYQSASLIAQDISFQLKNKRRSFHSIFAKIVKEIPKR-VE 457
Query: 148 GVKVIASGRLN-GAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
G+++ SGRL AE ++T+CY + IDY A T YG G+KV++S
Sbjct: 458 GIRICFSGRLKDAAEKAQTKCYKHRKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISYSQ 517
Query: 207 EVSDS 211
+
Sbjct: 518 KKGGR 522
>gi|272716524|gb|ACZ95543.1| ribosomal protein S3 [Actinostrobus pyramidalis]
Length = 646
Score = 98.1 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 67/152 (44%), Gaps = 9/152 (5%)
Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + + G ++ K+R LS TN+ + ++ +A+ IAQ I
Sbjct: 493 GMMIRIIPTNRKIPYGYNYYLNEVRKMRSLLSGGTNANTFIRSVKIKSVYQSASPIAQDI 552
Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173
+ QL FR + V+ R G G+++ GRL GAE++RTEC G+
Sbjct: 553 SFQLRDGTRSFRSIFFQIVRDISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKP 612
Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
T R IDY A T YG G+KV++
Sbjct: 613 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 644
>gi|302748953|gb|ADL63956.1| ribosomal protein S3 [Phyllonoma laticuspis]
Length = 487
Score = 98.1 bits (243), Expect = 8e-19, Method: Composition-based stats.
Identities = 49/174 (28%), Positives = 81/174 (46%), Gaps = 5/174 (2%)
Query: 32 LLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKL 91
L E KI E ++ + G+ ++ I+ II+ +++K+R L
Sbjct: 315 NLMEKDKIMELIEKFIDLGGIGEL-IKGIEMMIEIILRKIIIPYGYNSYLNEVKKMRSLL 373
Query: 92 SNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGAD 147
SN TN+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G +
Sbjct: 374 SNRTNTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVE 433
Query: 148 GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVY 201
G+++ SGR GAE++RTEC G+ IDY A T YG G+KV+
Sbjct: 434 GIRICCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVW 487
>gi|328541258|gb|AEB21853.1| ribosomal protein S3 [Acromastigum filum]
Length = 373
Score = 98.1 bits (243), Expect = 9e-19, Method: Composition-based stats.
Identities = 38/124 (30%), Positives = 65/124 (52%), Gaps = 1/124 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKCGETSLHVFSDQIDYAKTQASTPYGILGV 369
Query: 199 KVYV 202
KV+V
Sbjct: 370 KVWV 373
>gi|44967154|gb|AAS49565.1| ribosomal protein S3 [Latimeria chalumnae]
Length = 211
Score = 98.1 bits (243), Expect = 9e-19, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 13 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 72
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 73 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 132
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 133 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 191
Query: 212 DST 214
Sbjct: 192 KPL 194
>gi|302749099|gb|ADL64029.1| ribosomal protein S3 [Trimenia moorei]
Length = 500
Score = 98.1 bits (243), Expect = 9e-19, Method: Composition-based stats.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 5/170 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 332 KVMELIEKFIDLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSVLSNRTNT 390
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + + M G +G+++
Sbjct: 391 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDISLVMPKGVEGIRICC 450
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 451 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 500
>gi|288191259|gb|ADC43982.1| ribosomal protein S3 [Rinorea bengalensis]
Length = 471
Score = 98.1 bits (243), Expect = 9e-19, Method: Composition-based stats.
Identities = 49/171 (28%), Positives = 85/171 (49%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + R +++K+R LSN TNS
Sbjct: 296 KVMELIEKFINLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNKTNS 354
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRA---VQSAMRFGADGVKVIA 153
+ ++ +A+LIAQ I+ QL ++ FR + + M+ G +G+++
Sbjct: 355 NTLIESVKIQSVYQSASLIAQEISFQLRNKKRSFRSIFSKIEKDIPLVMKKGVEGIRICC 414
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RT+C G+ IDY A T YG G+KV++S
Sbjct: 415 SGRLKGAEIARTKCGKSGKPSRNIFNQKIDYAPAEVSTRYGIPGVKVWISY 465
>gi|254739513|ref|ZP_05197210.1| 30S ribosomal protein S3 [Bacillus anthracis str. Kruger B]
Length = 65
Score = 97.8 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 34/66 (51%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI R+GV W SRWFA +Y LLHED+KIREY+ LK + VAK+ I R
Sbjct: 1 MGQKVNPIGLRVGVIRDWESRWFAE-KDYATLLHEDIKIREYINVRLKDSAVAKVEIGRA 59
Query: 61 HKNCRI 66
+
Sbjct: 60 ANRVNV 65
>gi|297822907|ref|XP_002879336.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
gi|297325175|gb|EFH55595.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
Length = 250
Score = 97.8 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 46/186 (24%), Positives = 79/186 (42%), Gaps = 13/186 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E L L + G + + + T II+ + R ++G+KG
Sbjct: 13 ADGVFYAEL-------NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 65
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + L +V + A A+S+ +L + RRA ++
Sbjct: 66 IRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +VI SG+L A +++ +++G + Q + +ID G GI
Sbjct: 126 VMESGAKGCEVIVSGKLRAA-RAKSMKFMDGYMVSSGQPTKEYIDSAVRHVLLRQGVLGI 184
Query: 199 KVYVSL 204
KV + L
Sbjct: 185 KVKIML 190
>gi|302748947|gb|ADL63953.1| ribosomal protein S3 [Phelline comosa]
Length = 483
Score = 97.8 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 8/171 (4%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN T +
Sbjct: 313 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRGYNFYLN---EVKKMRSLLSNRTKT 368
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + ++ M+ G +G+++
Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIRLVMKKGVEGIRICC 428
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 429 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 479
>gi|272716610|gb|ACZ95607.1| ribosomal protein S3 [Callitris columellaris]
Length = 656
Score = 97.8 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 9/152 (5%)
Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + + G ++ K+R LS TN+ + ++ +A+ IAQ I
Sbjct: 503 GMMIRIIPTNRKIPYGYNYYLNEVRKMRSLLSGGTNANTFIRSVKIKSVYQSASPIAQDI 562
Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173
+ QL FR + V++ R G G+++ GRL GAE++RTEC G+
Sbjct: 563 SFQLRDGTRSFRSIFFQIVRNISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKP 622
Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
T R IDY A T YG G+KV++
Sbjct: 623 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 654
>gi|224135747|ref|XP_002322150.1| predicted protein [Populus trichocarpa]
gi|222869146|gb|EEF06277.1| predicted protein [Populus trichocarpa]
Length = 233
Score = 97.8 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 46/186 (24%), Positives = 81/186 (43%), Gaps = 13/186 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E L L + G + + + T II+ + R ++G+KG
Sbjct: 13 ADGVFYAEL-------NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 65
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V + A A+S+ +L + RRA ++
Sbjct: 66 IRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +VI SG+L A+ +++ + +G + Q ++ +ID G GI
Sbjct: 126 VMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGI 184
Query: 199 KVYVSL 204
KV + L
Sbjct: 185 KVKIML 190
>gi|302749045|gb|ADL64002.1| ribosomal protein S3 [Spinacia oleracea]
Length = 472
Score = 97.8 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 53/174 (30%), Positives = 88/174 (50%), Gaps = 6/174 (3%)
Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90
LL +D I + ++ + G+ + LI+ II+ + R +++K+R
Sbjct: 301 NLLGKDKVI-KLIEKFIDLGGI-RELIKGIEMMIEIILKNRRIPYGYNSYLNEVKKMRSL 358
Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLER-RVVFRRAMKRAVQSA---MRFGA 146
LSN TN+ + ++ +A+ IAQ I+ Q ++ R FR + V+ M+ G
Sbjct: 359 LSNRTNTNTLIESVKIKSVYQSASSIAQDISFQPKKKRGSFRSIFSKIVKKIPLVMKKGV 418
Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200
+G+++ SGRL GAE++RTEC G+ L IDY +A T YG G+KV
Sbjct: 419 EGIRICCSGRLEGAEIARTECGKYGKTSCNVLHQKIDYASAEVSTRYGIVGVKV 472
>gi|121511934|gb|ABM55418.1| 40S ribosomal protein S3 [Xenopsylla cheopis]
Length = 243
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 41/189 (21%), Positives = 81/189 (42%), Gaps = 11/189 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E+L L + G + + + T II+ + R ++G+KG I ++ +K N ++
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRELTAVVQKRFNFIDN 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
G + +++ +++G + ++D T G GIKV + D
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQGVLGIKVKIM-----LPFDPAG 196
Query: 216 PAAEHRVVE 224
+ +
Sbjct: 197 KQGPKKPLP 205
>gi|302748527|gb|ADL63744.1| ribosomal protein S3 [Alisma plantago-aquatica]
Length = 466
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 5/172 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ ++ G LI+ II+ + +++K+R LS T +
Sbjct: 296 KVMELIEK-CREPGSTGELIKGIEMMIEIILRNRIIPYGYNSYLNEVKKMRSFLSERTKT 354
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRA---MKRAVQSAMRFGADGVKVIA 153
E + ++ +A+ IAQ I+ Q +R FR + + + S G +G+ +
Sbjct: 355 ETSIESVKIKSVYQSASPIAQDISFQPRNKRRSFRSILSHIVKDISSRRTKGVEGICICC 414
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
SGR GAE+SRTEC G+ L IDY +A T YG G+KV++S R
Sbjct: 415 SGRSKGAEISRTECGKYGKTSRNVLEQKIDYASAEVSTRYGISGVKVWISYR 466
>gi|224088766|ref|XP_002308530.1| predicted protein [Populus trichocarpa]
gi|118483836|gb|ABK93809.1| unknown [Populus trichocarpa]
gi|118485378|gb|ABK94546.1| unknown [Populus trichocarpa]
gi|222854506|gb|EEE92053.1| predicted protein [Populus trichocarpa]
Length = 236
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 46/186 (24%), Positives = 81/186 (43%), Gaps = 13/186 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E L L + G + + + T II+ + R ++G+KG
Sbjct: 13 ADGVFYAEL-------NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 65
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V + A A+S+ +L + RRA ++
Sbjct: 66 IRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +VI SG+L A+ +++ + +G + Q ++ +ID G GI
Sbjct: 126 VMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQPVKEYIDAAVRHVLLRQGVLGI 184
Query: 199 KVYVSL 204
KV + L
Sbjct: 185 KVKIML 190
>gi|28630191|gb|AAN77884.1| ribosomal protein S3 [Scyliorhinus canicula]
Length = 211
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 13 EFLTRGLAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 72
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 73 RVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 132
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 133 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 191
Query: 212 DST 214
Sbjct: 192 KPL 194
>gi|328541252|gb|AEB21850.1| ribosomal protein S3 [Acromastigum cavifolium]
Length = 374
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 38/124 (30%), Positives = 65/124 (52%), Gaps = 1/124 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 251 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 310
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 311 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKCGETSLHVFSDQIDYAKTQASTPYGILGV 370
Query: 199 KVYV 202
KV+V
Sbjct: 371 KVWV 374
>gi|312380148|gb|EFR26232.1| hypothetical protein AND_07881 [Anopheles darlingi]
Length = 278
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 39/183 (21%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 58 EFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRELTSVVQKRFGFAPG 117
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 118 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 177
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + ++D T G GIKV + L ++
Sbjct: 178 RG-QRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKVKIMLPWDPNGKIGPK 236
Query: 212 DST 214
Sbjct: 237 KPL 239
>gi|255513430|gb|EET89696.1| ribosomal protein S3- domain protein [Candidatus Micrarchaeum
acidiphilum ARMAN-2]
Length = 207
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 52/190 (27%), Positives = 92/190 (48%), Gaps = 3/190 (1%)
Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN 96
L I ++L L +AG +++ I++T RI VY PG +IG+ G I+ + + + + N
Sbjct: 15 LNISKFLGTELSKAGFSRVEIQKTPIITRITVYVLNPGRVIGRGGKAIDDLTETIKSRFN 74
Query: 97 -SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155
+ +SV EV I L+A+ IA +LER + R+ ++ ++S M GA G ++I SG
Sbjct: 75 VNNPRISVVEVQNKMIEPLLVAKDIAFKLERGINPRKIIQFTLKSIMENGALGAEIIISG 134
Query: 156 RLNGA-ELSRTECYLEGRVPLQTLRAH-IDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
+L +++ G +P + ++ G A A YG+ G+ V + V
Sbjct: 135 KLAAKGARAKSIRKSVGYIPKAGDVINLVNKGVATAYPKYGAIGVVVRIVPPGTVFPDRE 194
Query: 214 TIPAAEHRVV 223
R +
Sbjct: 195 IKKVEIPRSI 204
>gi|9653234|ref|NP_062480.1| ribosomal protein S3 [Chondrus crispus]
gi|1351020|sp|P48938|RT03_CHOCR RecName: Full=Ribosomal protein S3, mitochondrial
gi|1334481|emb|CAA87601.1| ribosomal protein S3 [Chondrus crispus]
Length = 240
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 44/226 (19%), Positives = 95/226 (42%), Gaps = 22/226 (9%)
Query: 1 MGQKINPILFRLGVNCTWNSRW--FARG-SEYGALLHEDLKIREYLQCHLKQAGVAKILI 57
M QKINPI FRLG WNS + + Y ++++ L ++ ++ ++K G
Sbjct: 1 MAQKINPISFRLGTTQVWNSTLQIYGKSFKNYFSIVNNQLNLQNFIIRYVKLNGFQINYY 60
Query: 58 -ERTHKNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATL 115
+ HKN + P GK T+ +++ LSN +++ K + +
Sbjct: 61 EWKMHKNKTFLSIYFSPSFNNGKLNLTNFKQLSNLLSNWCSNKFIFHFYLNSKWSLTSNF 120
Query: 116 IAQSIAQQLERRVVFRRAM-------KRAVQSAMRFGAD---------GVKVIASGRLNG 159
+ +E+++ ++ + + + S+ G K+ GR +
Sbjct: 121 LTLYTKYLVEQKLGPKKIIVILCNFLQDQLNSSKVMHFKFGFIETKLVGFKIRLVGRFDS 180
Query: 160 A-ELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
+ +++++ G + L L + ++Y T G+CG++V++
Sbjct: 181 SNQMAKSFDQTIGTLSLTNLSSFVEYSNIEIHTKLGTCGVQVWLFF 226
>gi|15225107|ref|NP_180719.1| 40S ribosomal protein S3 (RPS3A) [Arabidopsis thaliana]
gi|75206146|sp|Q9SIP7|RS31_ARATH RecName: Full=40S ribosomal protein S3-1
gi|14190419|gb|AAK55690.1|AF378887_1 At2g31610/T9H9.13 [Arabidopsis thaliana]
gi|4582468|gb|AAD24852.1| 40S ribosomal protein; contains C-terminal domain [Arabidopsis
thaliana]
gi|15028253|gb|AAK76715.1| putative 40S ribosomal protein; contains C-terminal domain
[Arabidopsis thaliana]
gi|15450571|gb|AAK96463.1| At2g31610/T9H9.13 [Arabidopsis thaliana]
gi|15451084|gb|AAK96813.1| 40S ribosomal protein [Arabidopsis thaliana]
gi|20148377|gb|AAM10079.1| 40S ribosomal protein; contains C-terminal domain [Arabidopsis
thaliana]
gi|20258907|gb|AAM14147.1| putative 40S ribosomal protein [Arabidopsis thaliana]
gi|330253473|gb|AEC08567.1| 40S ribosomal protein S3-1 [Arabidopsis thaliana]
Length = 250
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 13/186 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E L L + G + + + T II+ + R ++G+KG
Sbjct: 13 ADGVFYAEL-------NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 65
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + L +V + A A+S+ +L + RRA ++
Sbjct: 66 IRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +VI SG+L A +++ + +G + Q + +ID G GI
Sbjct: 126 VMESGAKGCEVIVSGKLRAA-RAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQGVLGI 184
Query: 199 KVYVSL 204
KV + L
Sbjct: 185 KVKIML 190
>gi|272716521|gb|ACZ95541.1| ribosomal protein S3 [Pseudotaxus chienii]
Length = 541
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 47/156 (30%), Positives = 68/156 (43%), Gaps = 11/156 (7%)
Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINA 113
++I KN RI ++ K+R LS TN + ++ +A
Sbjct: 393 GMMIGVIPKNRRI-------PYGYDYYSNEVRKMRPLLSGGTNVNTSIGSVKIESVYQSA 445
Query: 114 TLIAQSIAQQLERRVV-FRRAMKRAVQ---SAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ IAQ I+ QL FR R V+ M G G+++ GRL GAE++RTEC
Sbjct: 446 SPIAQDISFQLRDGTRSFRSIFGRIVRDIPLIMPKGVGGIRICCPGRLKGAEIARTECRE 505
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
G+ R IDY A T YG G+KV++
Sbjct: 506 YGKTSCNAFRHQIDYAYAKVSTRYGILGVKVWIPFP 541
Score = 35.4 bits (80), Expect = 6.4, Method: Composition-based stats.
Identities = 16/80 (20%), Positives = 30/80 (37%), Gaps = 17/80 (21%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLH-----EDLKIREYL------QCHLKQ 49
M +K+NPI RL +N + + S + H +D+ REY
Sbjct: 1 MARKVNPISVRLHLNRS------SDPSRFSDYYHGKPMYQDVNPREYFGSIRPPTRETFG 54
Query: 50 AGVAKILIERTHKNCRIIVY 69
+ + + + K I ++
Sbjct: 55 FRLGRCIPHHSPKRTFIHLF 74
>gi|328683380|emb|CBL52984.1| ribosomal protein S3 [Plecoglossus altivelis]
Length = 245
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 38/196 (19%), Positives = 81/196 (41%), Gaps = 10/196 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 TVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201
Query: 212 DSTIPAAEHRVVEKDS 227
++++
Sbjct: 202 KPLPDHVSIVEPKEET 217
>gi|302749007|gb|ADL63983.1| ribosomal protein S3 [Santalum album]
Length = 473
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 47/169 (27%), Positives = 79/169 (46%), Gaps = 9/169 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ I + G+ G +++K+R LSN T
Sbjct: 308 KVMELIEKFIDLGGIGEL---IKGIEMMIEIILRNRGIPYGYNSYLNEVKKMRSLLSNRT 364
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++
Sbjct: 365 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRI 424
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200
SGRL GAE++RTEC G+ IDY A T YG G+KV
Sbjct: 425 CCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKV 473
>gi|302748739|gb|ADL63850.1| ribosomal protein S3 [Euptelea polyandra]
Length = 483
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 9/172 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ + I + + G +++K+R LSN T
Sbjct: 315 KVMELIEKFIDLGGIGE---WIKGIEMMIEIILRNRRIPDGDNFYLNEVKKMRSLLSNRT 371
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ Q + FR + V+ M G +G+++
Sbjct: 372 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIPLVMPKGVEGIRI 431
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 432 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 483
>gi|225707598|gb|ACO09645.1| 40S ribosomal protein S3 [Osmerus mordax]
Length = 245
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 38/196 (19%), Positives = 81/196 (41%), Gaps = 10/196 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201
Query: 212 DSTIPAAEHRVVEKDS 227
++++
Sbjct: 202 KPLPDHVSIVEPKEET 217
>gi|302748737|gb|ADL63849.1| ribosomal protein S3 [Eupomatia bennettii]
Length = 454
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + R +++KIR LSN TN+
Sbjct: 285 KVMELIEKFIDLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVQKIRSLLSNRTNT 343
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIA 153
E + ++ +A+ IAQ I+ Q + FR + ++ M G +G+++
Sbjct: 344 ETLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIKLVMPKGVEGIRICC 403
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RT+C G+ IDY A T YG G+KV +S
Sbjct: 404 SGRSEGAEIARTKCGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRISY 454
>gi|255637525|gb|ACU19089.1| unknown [Glycine max]
Length = 239
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 6/169 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E L L + G + + + T II+ + R ++G+KG I ++ +K +
Sbjct: 23 EVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLGEKGRRIRELTSVVQKRFKFPEN 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L
Sbjct: 83 SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKL 142
Query: 158 NGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
A+ ++ + +G + Q ++ +ID+ G GIKV + L
Sbjct: 143 R-AQRAKFMKFKDGYMIFFGQPVKDYIDFAVRHVLLRQGVFGIKVKIML 190
>gi|302748858|gb|ADL63909.1| ribosomal protein S3 [Magnolia tripetala]
Length = 455
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 46/171 (26%), Positives = 79/171 (46%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + R ++ KIR LSN TN+
Sbjct: 286 KVMELIEKFIDLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVHKIRSLLSNRTNT 344
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + ++ M G +G+++
Sbjct: 345 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIKLVMPKGVEGIRICC 404
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGR GAE++RT+C G+ IDY A T YG G+KV +S
Sbjct: 405 SGRSEGAEIARTKCGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRISY 455
>gi|302748731|gb|ADL63846.1| ribosomal protein S3 [Eucommia ulmoides]
Length = 461
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 47/167 (28%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN T +
Sbjct: 296 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTKT 354
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
++ ++ +A+ IAQ I+ Q + FR M + V+ M+ G +G+++
Sbjct: 355 HTNIESVKIQSVYQSASPIAQDISFQPRNKTRSFRSIMSQIVKEIPLVMKKGVEGIRICC 414
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200
SGRL GAE++RTEC G+ +DY A T YG G+KV
Sbjct: 415 SGRLEGAEIARTECGKYGKTSRNVFNQKMDYAPAEVSTRYGILGVKV 461
>gi|197632569|gb|ACH71008.1| ribosomal protein S3-1 [Salmo salar]
gi|209738348|gb|ACI70043.1| 40S ribosomal protein S3 [Salmo salar]
Length = 245
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M G+ G +V+ SG+L
Sbjct: 83 NVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGSKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|224141685|ref|XP_002324195.1| predicted protein [Populus trichocarpa]
gi|118483222|gb|ABK93514.1| unknown [Populus trichocarpa]
gi|118487214|gb|ABK95435.1| unknown [Populus trichocarpa]
gi|222865629|gb|EEF02760.1| predicted protein [Populus trichocarpa]
Length = 234
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 46/186 (24%), Positives = 81/186 (43%), Gaps = 13/186 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E L L + G + + + T II+ + R ++G+KG
Sbjct: 13 ADGVFYAEL-------NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 65
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V + A A+S+ +L + RRA ++
Sbjct: 66 IRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +VI SG+L A+ +++ + +G + Q ++ +ID G GI
Sbjct: 126 VMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGI 184
Query: 199 KVYVSL 204
KV + L
Sbjct: 185 KVKIML 190
>gi|209732420|gb|ACI67079.1| 40S ribosomal protein S3 [Salmo salar]
Length = 245
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M G+ G +V+ SG+L
Sbjct: 83 NVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGSKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|302748545|gb|ADL63753.1| ribosomal protein S3 [Annona muricata]
Length = 429
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 47/170 (27%), Positives = 76/170 (44%), Gaps = 14/170 (8%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E++ + + G+ I I + +++KIR LSN T +
Sbjct: 270 KVMEFIDKFIDRIGIKGIEI----------ILRRGIPYRYNSYLNEVQKIRSLLSNRTKT 319
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQ---SAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q +R FR + V+ M G +G+++
Sbjct: 320 NTLIESVKIKSVYQSASPIAQDISFQPRNKRRSFRSIFSQIVRDMKLVMPKGVEGIRICC 379
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 380 SGRSKGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGISGVKVRIS 429
>gi|295314928|gb|ADF97614.1| ribosomal protein S3B [Hypophthalmichthys molitrix]
Length = 245
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|149068848|gb|EDM18400.1| rCG40478, isoform CRA_j [Rattus norvegicus]
Length = 277
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|302829332|ref|XP_002946233.1| hypothetical protein VOLCADRAFT_120230 [Volvox carteri f.
nagariensis]
gi|300269048|gb|EFJ53228.1| hypothetical protein VOLCADRAFT_120230 [Volvox carteri f.
nagariensis]
Length = 1596
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 47/213 (22%), Positives = 82/213 (38%), Gaps = 20/213 (9%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E L L + G + + + T II+ + R ++G+KG
Sbjct: 1379 ADGVFYAEL-------NELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 1431
Query: 84 IEKIRKKLSNMTNSE---IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ + N + L +V + A A+S+ +L + RRA ++
Sbjct: 1432 IRELTSVVQKRFNFPADSVELYAEKVLDRGLCAVAQAESLRYKLLGGLAVRRACYGVLRF 1491
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +VI SG+L A +++ + +G + + +ID G GI
Sbjct: 1492 VMESGAKGCEVIVSGKLRAA-RAKSMKFKDGYMVSSGNPAKVYIDAAVRHVLLRQGVLGI 1550
Query: 199 KVYVS-------LRDEVSDSDSTIPAAEHRVVE 224
KV + R + + E + E
Sbjct: 1551 KVKIMKDWDPTGKRGPRTPLPDVVKVLEPKEEE 1583
>gi|37595356|gb|AAQ94564.1| ribosomal protein S3 [Danio rerio]
Length = 245
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|195637410|gb|ACG38173.1| 40S ribosomal protein S3 [Zea mays]
Length = 228
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 10/179 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E L L + G + + + T II+ + R ++G+KG I ++ + N +
Sbjct: 23 EMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPEN 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA+G +VI SG+L
Sbjct: 83 GVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAEGCEVIVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL----RDEVSD 210
A+ +++ + +G + Q + +ID G GIKV + L + +V
Sbjct: 143 R-AQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGP 200
>gi|3248940|gb|AAD09929.1| 30S ribosomal protein S3 [Coxiella burnetii]
Length = 74
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 31/67 (46%), Positives = 45/67 (67%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NP+ R+G+ W S W+A ++ L+EDL +R+ LQ LK A V++I IERT
Sbjct: 1 MGQKVNPVGMRIGITRDWTSNWYADKKDFADRLNEDLNVRQLLQKRLKGAAVSRIQIERT 60
Query: 61 HKNCRII 67
+N +II
Sbjct: 61 ARNAKII 67
>gi|70909551|emb|CAJ17197.1| ribosomal protein S3e [Scarabaeus laticollis]
Length = 241
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 41/189 (21%), Positives = 78/189 (41%), Gaps = 11/189 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ + N
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRELTSVVQKRFNFPEH 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
G + +++ +++G + ++D T G GIKV + D
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQGVLGIKVKIM-----LPWDPNG 196
Query: 216 PAAEHRVVE 224
R +
Sbjct: 197 KTGPKRPLP 205
>gi|223646682|gb|ACN10099.1| 40S ribosomal protein S3 [Salmo salar]
gi|223672531|gb|ACN12447.1| 40S ribosomal protein S3 [Salmo salar]
Length = 245
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M G+ G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGSKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|242005202|ref|XP_002423460.1| 40S ribosomal protein S3, putative [Pediculus humanus corporis]
gi|212506548|gb|EEB10722.1| 40S ribosomal protein S3, putative [Pediculus humanus corporis]
Length = 238
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 43/195 (22%), Positives = 83/195 (42%), Gaps = 10/195 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G KG I ++ + N
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQSVLGDKGKRIRELTSVVQKRFNFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 TVELYAEKVAARGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D T G GIKV + LR +V
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGEPTNDYVDCATRHVLLRQGVLGIKVKIMLRCDPNGKVGPK 201
Query: 212 DSTIPAAEHRVVEKD 226
E +++
Sbjct: 202 KPLPDCVEVPGPKEE 216
>gi|60652571|gb|AAX28980.1| ribosomal protein S3 [synthetic construct]
Length = 244
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|124028161|ref|YP_001013481.1| 30S ribosomal protein S3P [Hyperthermus butylicus DSM 5456]
gi|152060866|sp|A2BMC5|RS3_HYPBU RecName: Full=30S ribosomal protein S3P
gi|123978855|gb|ABM81136.1| 30S ribosomal protein S3P [Hyperthermus butylicus DSM 5456]
Length = 247
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 51/186 (27%), Positives = 83/186 (44%), Gaps = 5/186 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN- 96
+I EYL +AG A + I + R+I+Y+ RP +IIG++G I ++ +
Sbjct: 17 QIDEYLAKRFYRAGYAGVQIIQFPLGTRVIIYAERPAMIIGRRGETIRQLAAIFEHEFGL 76
Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156
S ++V V P++NA ++A IA LER +RR + + GA GV+++ SG+
Sbjct: 77 SNPQITVRRVENPDLNARVVASRIAVLLERGAYYRRVANVMARRVLNAGAIGVQIVISGK 136
Query: 157 LNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
L E +R E G+V + +D G GI+V +
Sbjct: 137 LR-TERARYEKVRRGKVYTTGHQVEYMVDRAVMHVTLKPGVLGIEVMIVKP-AKPSDYVR 194
Query: 215 IPAAEH 220
I E
Sbjct: 195 IKQPEE 200
>gi|7765076|gb|AAB19349.2| S3 ribosomal protein [Homo sapiens]
Length = 243
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|302749071|gb|ADL64015.1| ribosomal protein S3 [Takhtajania perrieri]
Length = 478
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 77/172 (44%), Gaps = 9/172 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + + ++ I + + G +++KIR LSN T
Sbjct: 310 KVMELIEKFIDLGRIGEL---IKGIEMMIEIILKNRIIPYGYNSYLNEVQKIRSLLSNRT 366
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ Q + FR + V+ M G +G+++
Sbjct: 367 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMPKGVEGIRI 426
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 427 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 478
>gi|308323395|gb|ADO28834.1| 40S ribosomal protein s3 [Ictalurus punctatus]
Length = 245
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|12848978|dbj|BAB28159.1| unnamed protein product [Mus musculus]
Length = 243
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|13097759|gb|AAH03577.1|AAH03577 Unknown (protein for IMAGE:3544292) [Homo sapiens]
gi|15341992|gb|AAH13196.1|AAH13196 Unknown (protein for IMAGE:4347401) [Homo sapiens]
Length = 242
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 22 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 81
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 82 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 141
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 142 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPK 200
Query: 212 DST 214
Sbjct: 201 KPL 203
>gi|16082264|ref|NP_394722.1| 30S ribosomal protein S3P [Thermoplasma acidophilum DSM 1728]
gi|27734534|sp|Q9HIR5|RS3_THEAC RecName: Full=30S ribosomal protein S3P
gi|10640611|emb|CAC12389.1| probable 30S ribosomal protein S3 [Thermoplasma acidophilum]
Length = 225
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 45/174 (25%), Positives = 89/174 (51%), Gaps = 4/174 (2%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEI- 99
EY+ + AG ++++RT I +Y RPGL+IG++G+ ++++ L E
Sbjct: 18 EYVVKETENAGFGNMVMKRTPFGTNITLYVNRPGLVIGRRGSKVQQMTDTLEKKYGIETP 77
Query: 100 HLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNG 159
+ V +V P++N ++IA+ IA LE+ +R+A ++ ++ GA GV + SG+++G
Sbjct: 78 QIEVKDVKDPDLNPSVIAKKIALSLEKGWSYRKAGNTSLNRTIQAGAKGVLIKISGKISG 137
Query: 160 AELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
E +R + ++ G V + + G + A+ G G+ V + +
Sbjct: 138 -ERARYQKFIYGNVKYSGEPGSKGMITGFSTAKLKVGILGVTVKILNPEYKLPD 190
>gi|41056077|ref|NP_957447.1| 40S ribosomal protein S3 [Danio rerio]
gi|28374213|gb|AAH45902.1| Ribosomal protein S3 [Danio rerio]
gi|182891740|gb|AAI65099.1| Rps3 protein [Danio rerio]
Length = 245
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 GVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|118488288|gb|ABK95963.1| unknown [Populus trichocarpa]
Length = 232
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 46/186 (24%), Positives = 81/186 (43%), Gaps = 13/186 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E L L + G + + + T II+ + R ++G+KG
Sbjct: 13 ADGVFYAEL-------NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 65
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V + A A+S+ +L + RRA ++
Sbjct: 66 IRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +VI SG+L A+ +++ + +G + Q ++ +ID G GI
Sbjct: 126 VMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGI 184
Query: 199 KVYVSL 204
KV + L
Sbjct: 185 KVKIML 190
>gi|296081703|emb|CBI20708.3| unnamed protein product [Vitis vinifera]
Length = 235
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 6/169 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E L L + G + + + T II+ + R ++G+KG I ++ +K +
Sbjct: 23 EVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGKRIRELTSVVQKRFKFPEN 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L
Sbjct: 83 SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
A+ +++ + +G + Q ++ +ID G GIKV + L
Sbjct: 143 R-AQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKVKIML 190
>gi|255641130|gb|ACU20843.1| unknown [Glycine max]
Length = 236
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 6/169 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E L L + G + + + T II+ + R ++G+KG I ++ +K +
Sbjct: 23 EVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLGEKGRRIRELTSVVQKRFKFPEN 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L
Sbjct: 83 SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
A+ +++ + +G + Q ++ +ID G GIKV + L
Sbjct: 143 R-AQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKVKIML 190
>gi|302748814|gb|ADL63887.1| ribosomal protein S3 [Ilex sp. Qiu 94038]
Length = 475
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 5/173 (2%)
Query: 32 LLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKL 91
L E K+ E ++ + G+ ++ I+ II+ + R +++K+R L
Sbjct: 304 NLMEKDKVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLL 362
Query: 92 SNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGAD 147
SN TN+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G +
Sbjct: 363 SNRTNTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVE 422
Query: 148 GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200
G+++ SGR GAE++RTEC G+ IDY A T YG G+KV
Sbjct: 423 GIRICCSGRSEGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGISGVKV 475
>gi|223646268|gb|ACN09892.1| 40S ribosomal protein S3 [Salmo salar]
gi|223672115|gb|ACN12239.1| 40S ribosomal protein S3 [Salmo salar]
Length = 245
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEC 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M G+ G +V+ SG+L
Sbjct: 83 NVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGSKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|90991377|dbj|BAE93070.1| ribosomal protein S3 [Lethenteron japonicum]
Length = 240
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ + N
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTSVIQKRFNFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A +S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVANRGLCAIAQCESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNHYVDTAIRHVLLRQGVLGIKVKIMLPWDTTGKMGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|6755372|ref|NP_036182.1| 40S ribosomal protein S3 [Mus musculus]
gi|57164151|ref|NP_001009239.1| 40S ribosomal protein S3 [Rattus norvegicus]
gi|57102362|ref|XP_534008.1| PREDICTED: similar to 40S ribosomal protein S3 isoform 1 [Canis
familiaris]
gi|73987935|ref|XP_849947.1| PREDICTED: similar to 40S ribosomal protein S3 isoform 3 [Canis
familiaris]
gi|73987937|ref|XP_860278.1| PREDICTED: similar to 40S ribosomal protein S3 isoform 4 [Canis
familiaris]
gi|149719291|ref|XP_001494894.1| PREDICTED: similar to 40S ribosomal protein S3 [Equus caballus]
gi|291384249|ref|XP_002708735.1| PREDICTED: ribosomal protein S3-like [Oryctolagus cuniculus]
gi|301759004|ref|XP_002915347.1| PREDICTED: 40S ribosomal protein S3-like [Ailuropoda melanoleuca]
gi|51703302|sp|P62909|RS3_RAT RecName: Full=40S ribosomal protein S3
gi|51703309|sp|P62908|RS3_MOUSE RecName: Full=40S ribosomal protein S3
gi|325530283|sp|E2RH47|RS3_CANFA RecName: Full=40S ribosomal protein S3
gi|57728|emb|CAA35916.1| unnamed protein product [Rattus rattus]
gi|439522|emb|CAA54167.1| ribosomal protein S3 [Mus musculus]
gi|12833687|dbj|BAB22624.1| unnamed protein product [Mus musculus]
gi|12846127|dbj|BAB27042.1| unnamed protein product [Mus musculus]
gi|12848850|dbj|BAB28111.1| unnamed protein product [Mus musculus]
gi|14715107|gb|AAH10721.1| Ribosomal protein S3 [Mus musculus]
gi|15421127|gb|AAK95377.1| ribosomal protein S3 [Mus musculus]
gi|26341816|dbj|BAC34570.1| unnamed protein product [Mus musculus]
gi|56970487|gb|AAH88450.1| Ribosomal protein S3 [Rattus norvegicus]
gi|74137630|dbj|BAE35844.1| unnamed protein product [Mus musculus]
gi|74138495|dbj|BAE38059.1| unnamed protein product [Mus musculus]
gi|74146996|dbj|BAE27438.1| unnamed protein product [Mus musculus]
gi|74177801|dbj|BAE38991.1| unnamed protein product [Mus musculus]
gi|74190989|dbj|BAE39337.1| unnamed protein product [Mus musculus]
gi|74191087|dbj|BAE39379.1| unnamed protein product [Mus musculus]
gi|74195112|dbj|BAE28299.1| unnamed protein product [Mus musculus]
gi|74197190|dbj|BAE35140.1| unnamed protein product [Mus musculus]
gi|74211022|dbj|BAE37615.1| unnamed protein product [Mus musculus]
gi|74223053|dbj|BAE40668.1| unnamed protein product [Mus musculus]
gi|148684445|gb|EDL16392.1| ribosomal protein S3, isoform CRA_g [Mus musculus]
gi|149068850|gb|EDM18402.1| rCG40478, isoform CRA_l [Rattus norvegicus]
gi|327239238|gb|AEA39486.1| ribosomal protein S3 [Ailuropoda melanoleuca]
gi|327239330|gb|AEA39532.1| ribosomal protein S3 [Ailuropoda melanoleuca]
Length = 243
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|328541236|gb|AEB21842.1| ribosomal protein S3 [Pseudocephalozia lepidozioides]
Length = 375
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 37/126 (29%), Positives = 65/126 (51%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISCKLEQKKSFRQICRSIFR 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369
Query: 199 KVYVSL 204
KV+ S
Sbjct: 370 KVWXSY 375
>gi|116786147|gb|ABK23996.1| unknown [Picea sitchensis]
gi|116793880|gb|ABK26916.1| unknown [Picea sitchensis]
Length = 233
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 6/169 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E L L + G + + + T II+ + R ++G+KG I ++ + N
Sbjct: 23 EVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L
Sbjct: 83 TVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
A+ +++ + +G + Q + +ID G GIKV + L
Sbjct: 143 R-AQRAKSMKFKDGYMISSGQPVNEYIDKAVRHVLLRQGVLGIKVKIML 190
>gi|74222288|dbj|BAE26946.1| unnamed protein product [Mus musculus]
Length = 243
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 39/187 (20%), Positives = 80/187 (42%), Gaps = 10/187 (5%)
Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN 96
+++ E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 19 VELNEFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFG 78
Query: 97 ---SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIA 153
+ L +V + A A+S+ +L + RRA ++ M GA G KV+
Sbjct: 79 FPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCKVVV 138
Query: 154 SGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DE 207
SG+L G + +++ +++G + + ++D G GIKV + L +
Sbjct: 139 SGKLRG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGK 197
Query: 208 VSDSDST 214
+
Sbjct: 198 IGPKKPL 204
>gi|225442156|ref|XP_002275541.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|297743020|emb|CBI35887.3| unnamed protein product [Vitis vinifera]
Length = 234
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 6/169 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E L L + G + + + T II+ + R ++G+KG I ++ +K +
Sbjct: 23 EVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPEN 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L
Sbjct: 83 TVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
A+ +++ + +G + Q ++ +ID G GIKV + L
Sbjct: 143 R-AQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIML 190
>gi|196012547|ref|XP_002116136.1| ribosomal protein S3e [Trichoplax adhaerens]
gi|190581459|gb|EDV21536.1| ribosomal protein S3e [Trichoplax adhaerens]
Length = 228
Score = 97.4 bits (241), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 81/190 (42%), Gaps = 13/190 (6%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE-- 98
+L L + G + + + T II+ + R ++G+KG I ++ + N
Sbjct: 24 NFLSRELAEDGYSGVEVRVTPTRTEIIISATRTQNVLGEKGRRIRELMSLIQKRFNFPED 83
Query: 99 -IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ + +V + A +S+ +L + RRA ++ M GA G +++ SG+L
Sbjct: 84 SVEIYAEKVAARGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEIVVSGKL 143
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
G + +++ +++G + + T + +DY G GIKV + +D T
Sbjct: 144 RG-QRAKSMKFVDGLM-IHTGQPCVDYVDTAIRHVYLRQGVLGIKVKIM-----LPTDPT 196
Query: 215 IPAAEHRVVE 224
+ + +
Sbjct: 197 GKSGPKKPLP 206
>gi|15718687|ref|NP_000996.2| 40S ribosomal protein S3 [Homo sapiens]
gi|77404290|ref|NP_001029219.1| 40S ribosomal protein S3 [Bos taurus]
gi|113205854|ref|NP_001038066.1| 40S ribosomal protein S3 [Sus scrofa]
gi|293331917|ref|NP_001168943.1| hypothetical protein LOC100382757 [Zea mays]
gi|109107963|ref|XP_001086020.1| PREDICTED: 40S ribosomal protein S3 [Macaca mulatta]
gi|417719|sp|P23396|RS3_HUMAN RecName: Full=40S ribosomal protein S3
gi|91207641|sp|Q3T169|RS3_BOVIN RecName: Full=40S ribosomal protein S3
gi|115502828|sp|Q0Z8U2|RS3_PIG RecName: Full=40S ribosomal protein S3
gi|187609257|pdb|2ZKQ|CC Chain c, Structure Of A Mammalian Ribosomal 40s Subunit Within An
80s Complex Obtained By Docking Homology Models Of The
Rna And Proteins Into An 8.7 A Cryo-Em Map
gi|555941|gb|AAB60336.1| ribosomal protein S3 [Homo sapiens]
gi|555943|gb|AAB60337.1| ribosomal protein S3 [Homo sapiens]
gi|555945|gb|AAB60338.1| ribosomal protein S3 [Homo sapiens]
gi|13111933|gb|AAH03137.1| Ribosomal protein S3 [Homo sapiens]
gi|17932970|dbj|BAB79476.1| ribosomal protein S3 [Homo sapiens]
gi|21707655|gb|AAH34149.1| Ribosomal protein S3 [Homo sapiens]
gi|48734761|gb|AAH71917.1| Ribosomal protein S3 [Homo sapiens]
gi|54781367|gb|AAV40835.1| ribosomal protein S3 [Homo sapiens]
gi|72679750|gb|AAI00285.1| Ribosomal protein S3 [Homo sapiens]
gi|74268226|gb|AAI02091.1| Ribosomal protein S3 [Bos taurus]
gi|110006645|gb|ABG48767.1| ribosomal protein S3 [Sus scrofa]
gi|119595369|gb|EAW74963.1| ribosomal protein S3 [Homo sapiens]
gi|123987601|gb|ABM83814.1| ribosomal protein S3 [synthetic construct]
gi|123999104|gb|ABM87135.1| ribosomal protein S3 [synthetic construct]
gi|189053630|dbj|BAG35882.1| unnamed protein product [Homo sapiens]
gi|208967330|dbj|BAG73679.1| ribosomal protein S3 [synthetic construct]
gi|223973891|gb|ACN31133.1| unknown [Zea mays]
gi|296479794|gb|DAA21909.1| 40S ribosomal protein S3 [Bos taurus]
Length = 243
Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|225682378|gb|EEH20662.1| 40S ribosomal protein S3 [Paracoccidioides brasiliensis Pb03]
Length = 261
Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 41/199 (20%), Positives = 77/199 (38%), Gaps = 16/199 (8%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ Q L + G + + + T II+ G++ +
Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIL------GEQGRRIRE 62
Query: 84 IEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMR 143
+ + +K + + L +V ++A +S+ +L + RRA ++ M
Sbjct: 63 LTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIME 122
Query: 144 FGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVY 201
GA G +V+ SG+L A +++ + +G + Q +R ID T G GIKV
Sbjct: 123 SGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPVRDFIDSATRHVLLRQGVLGIKVK 181
Query: 202 VSLRDEVSDSDSTIPAAEH 220
+ + +
Sbjct: 182 IMRGSDPEGKSGPQKSLPD 200
>gi|272716532|gb|ACZ95549.1| ribosomal protein S3 [Fokienia hodginsii]
Length = 663
Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 9/152 (5%)
Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + + G ++ K+R LS TN+ + ++ +A+ IAQ I
Sbjct: 510 GMMIRIIPKNRRIPYGYNYYLNEVRKMRSLLSGGTNANTFIGSVKIKYVYQSASPIAQDI 569
Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173
+ QL FR + + V+ R G G+++ GRL GAE++RTEC G+
Sbjct: 570 SFQLRDGTRSFRSILWKIVRGISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKT 629
Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
T R IDY A T YG G+KV++
Sbjct: 630 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 661
>gi|319004942|ref|NP_001187068.1| 40S ribosomal protein S3 [Ictalurus punctatus]
gi|22001962|sp|Q90YS2|RS3_ICTPU RecName: Full=40S ribosomal protein S3
gi|15294015|gb|AAK95184.1|AF402810_1 40S ribosomal protein S3 [Ictalurus punctatus]
Length = 245
Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPRG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|302748891|gb|ADL63925.1| ribosomal protein S3 [Myrothamnus flabellifolia]
Length = 492
Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 9/169 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ R I + + G +++K+R LSN T
Sbjct: 327 KVMELIEKFIDLGGIGEL---RKGIEMMIEIILRNRRIPYGYNSYLNEVQKMRSLLSNRT 383
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ Q +R FR + + V++ M+ G +G+++
Sbjct: 384 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKRRSFRSILSQIVKNIPLVMKKGVEGIRI 443
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200
SGR GAE++RTEC G+ IDY A T YG G+KV
Sbjct: 444 CCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKV 492
>gi|302749047|gb|ADL64003.1| ribosomal protein S3 [Spiraea sp. Qiu 05008]
Length = 489
Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 6/142 (4%)
Query: 66 IIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQ 123
I + + G +++K+R LSN TN+ + ++ +A+ IAQ I+ Q
Sbjct: 348 IEIIPRNRIIPYGYHSYLNEVKKMRSLLSNRTNTNTLIESVKIKSVYQSASPIAQDISFQ 407
Query: 124 LERRVV-FRRAMKRA---VQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
L + FR ++ ++ M+ G +G+++ SGR GAE++RTEC G+
Sbjct: 408 LRNKTRSFRSIFRKIVKDIRLVMKKGVEGIRICCSGRSKGAEIARTECGKYGKTSRNVFN 467
Query: 180 AHIDYGTAVAETAYGSCGIKVY 201
IDY A T +G G+KV+
Sbjct: 468 QKIDYTPAEVPTRFGILGVKVW 489
>gi|11465647|ref|NP_049318.1| ribosomal protein S3 [Porphyra purpurea]
gi|4106954|gb|AAD03121.1| ribosomal protein S3 [Porphyra purpurea]
Length = 227
Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 48/226 (21%), Positives = 90/226 (39%), Gaps = 22/226 (9%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEY---GALLHEDLKIREYLQCHLKQAGVAKILI 57
MGQK+NP FR+G++ W+ G + LL E I +L + + + + +
Sbjct: 1 MGQKVNPKGFRIGLSNLWHDEGQCYGKSFKNPKNLLKETRNIFTFLNQYFESKKLVRGQV 60
Query: 58 ERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117
E+ ++ YS + I+ K I K + I + N L+
Sbjct: 61 EQKV-FNKLKKYSIQYVPILPKSTPSICNTATKTTYAFKKNIQVRNYNATLWYQNGPLLC 119
Query: 118 QSIAQQLERRVVFRRAMKRAVQS----------------AMRFGADGVKVIASGRLNG-- 159
+ I L++ + FR+ + Q G+KV +GR G
Sbjct: 120 EFIKVSLKKGIAFRKIINTIQQLLVLKTPHKIVLKTSFGTNIMEYTGLKVRYTGRFGGSR 179
Query: 160 AELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+ ++ + L G V LQ + HI + ++ T G C ++V+++ +
Sbjct: 180 SRMASSIVCLIGAVSLQKIETHIQFYSSSLHTKQGLCNLQVWMAYK 225
>gi|255626187|gb|ACU13438.1| unknown [Glycine max]
Length = 236
Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 6/169 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E L L + G + + + T II+ + R ++G+KG I ++ +K +
Sbjct: 23 EVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLGEKGRRIRELTSVVQKRFKFPEN 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L
Sbjct: 83 SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACHGVLRFVMESGAKGCEVIVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
A+ +++ + +G + Q ++ +ID G GIKV + L
Sbjct: 143 R-AQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKVKIML 190
>gi|331249296|ref|XP_003337266.1| 40S ribosomal protein S3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309316256|gb|EFP92847.1| 40S ribosomal protein S3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 265
Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 40/200 (20%), Positives = 76/200 (38%), Gaps = 13/200 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ L + G + + TH +I+ + ++G+KG
Sbjct: 12 ADGVFYAEL-------SEFFTRELAEEGYSGCEVRVTHARTEVIIRATHTQEVLGQKGRR 64
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + L +V + + A +S+ +L + RRA ++
Sbjct: 65 IRELTSLVQKRFKFPEGSVELYAEKVQQRGLCAVAQCESLRYKLLGGLAVRRACYGVLRF 124
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M A G +V+ SG+L A +++ + +G + Q +D G GI
Sbjct: 125 IMESNAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPSVDFVDQAVRHVLLRQGVLGI 183
Query: 199 KVYVSLRDEVSDSDSTIPAA 218
KV + ++ P
Sbjct: 184 KVKIMRGNDTEGRGGAPPKP 203
>gi|272716598|gb|ACZ95598.1| ribosomal protein S3 [Metasequoia glyptostroboides]
Length = 620
Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + + G ++ K+R LS TN+ + ++ +A+ IAQ I
Sbjct: 467 GMMIRIIPKNRRIPYGYNYYLNEVRKMRSLLSGGTNANTFIGSVKIKSVYQSASPIAQDI 526
Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173
+ Q FR + V+ R G G+++ GRL GAE++RTEC G+
Sbjct: 527 SFQPRDGTRSFRSIFWKIVRDISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKT 586
Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
T R IDY A T YG G+KV++
Sbjct: 587 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 618
>gi|157118131|ref|XP_001659023.1| 40S ribosomal protein S3 [Aedes aegypti]
gi|108875828|gb|EAT40053.1| 40S ribosomal protein S3 [Aedes aegypti]
Length = 256
Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/183 (21%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 36 EFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRELTAVVQKRFGFAPG 95
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 96 TVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 155
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + ++D T G GIKV + L ++
Sbjct: 156 RG-QRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKVKIMLPWDPNGKIGPK 214
Query: 212 DST 214
Sbjct: 215 KPL 217
>gi|33772509|gb|AAQ54656.1| 40S ribosomal protein S3 [Oikopleura dioica]
gi|313212505|emb|CBY36474.1| unnamed protein product [Oikopleura dioica]
gi|313217134|emb|CBY38302.1| unnamed protein product [Oikopleura dioica]
gi|313233568|emb|CBY09740.1| unnamed protein product [Oikopleura dioica]
Length = 239
Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 42/194 (21%), Positives = 82/194 (42%), Gaps = 10/194 (5%)
Query: 42 YLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSE 98
YL+ L + G + + + T K II+ + R ++G K I ++ +K + +
Sbjct: 27 YLRKELAEDGYSGVEVRITPKRTEIIILATRTQNVLGDKAKRIRELTALVQKRFQIKDGA 86
Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLN 158
+ L +V + A +S+ +LE + RRA ++ M GA G +V+ SG+L
Sbjct: 87 VELFAEKVANRGLCAIAQCESLRYKLEGGLAVRRAAYGVLRFIMESGAKGCEVVISGKLR 146
Query: 159 GAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDSD 212
G + ++ + +G + + ++D G G+KV V L +V
Sbjct: 147 G-QRAKAMKFTDGLMIHTGHPVTEYVDTAVRHVMLRQGVIGLKVKVMLPHDPAGKVGPKT 205
Query: 213 STIPAAEHRVVEKD 226
E R +++
Sbjct: 206 PYPDIVEIREPKEE 219
>gi|272716586|gb|ACZ95589.1| ribosomal protein S3 [Platycladus orientalis]
Length = 627
Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 68/152 (44%), Gaps = 9/152 (5%)
Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + + G ++ K+R LS TN+ + ++ +A+ IAQ I
Sbjct: 474 GMMIRIIPKNRRIPYGYNYYLNEVRKMRSLLSGGTNANTFIGSVKIKSVYQSASPIAQDI 533
Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173
+ QL FR + + V+ R G G+++ GRL GAE++RTEC G+
Sbjct: 534 SFQLRDGTRSFRSILWKIVRDISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKT 593
Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
T R IDY A T YG G+KV++
Sbjct: 594 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 625
>gi|209733852|gb|ACI67795.1| 40S ribosomal protein S3 [Salmo salar]
Length = 250
Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 28 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 87
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M G+ G +V+ SG+L
Sbjct: 88 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGSKGCEVVVSGKL 147
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 148 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 206
Query: 212 DST 214
Sbjct: 207 KPL 209
>gi|82623397|gb|ABB87113.1| unknown [Solanum tuberosum]
Length = 238
Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 6/169 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E L L + G + + + T II+ + R ++G+KG I ++ + N +
Sbjct: 24 EVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFKEN 83
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L
Sbjct: 84 SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKL 143
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
A+ +++ + +G + Q ++ +ID G GIKV + L
Sbjct: 144 R-AQRAKSMKFKDGYMISSGQPVKEYIDAAVRHVLLRQGVLGIKVKIML 191
>gi|288869512|ref|NP_001165863.1| ribosomal protein S3 [Tribolium castaneum]
gi|270006106|gb|EFA02554.1| hypothetical protein TcasGA2_TC008261 [Tribolium castaneum]
Length = 241
Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 79/189 (41%), Gaps = 11/189 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+K I ++ + N +
Sbjct: 23 EFLTRELSEDGYSGVEVRVTPTRTEIIIMATRTDRVLGEKNRRIRELTSVVQKRFNFPEN 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVVLYGEKVANRGLCAIAQAESLRFKLIGGLAVRRACYGVLRYIMECGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
G + +++ +++G + ++D T G GIKV + D +
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQGVLGIKVKIM-----LPWDPSG 196
Query: 216 PAAEHRVVE 224
+ +
Sbjct: 197 KTGPKKPLP 205
>gi|116783944|gb|ABK23152.1| unknown [Picea sitchensis]
gi|116792247|gb|ABK26290.1| unknown [Picea sitchensis]
Length = 233
Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 6/169 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E L L + G + + + T II+ + R ++G+KG I ++ + N
Sbjct: 23 EVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L
Sbjct: 83 TVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
A+ +++ + +G + Q + +ID G GIKV + L
Sbjct: 143 R-AQRAKSMKFKDGYMISSGQPVNEYIDRAVRHVLLRQGVLGIKVKIML 190
>gi|126327841|ref|XP_001362617.1| PREDICTED: hypothetical protein [Monodelphis domestica]
Length = 243
Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|302748561|gb|ADL63761.1| ribosomal protein S3 [Asparagus officinalis]
Length = 473
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/144 (31%), Positives = 69/144 (47%), Gaps = 6/144 (4%)
Query: 66 IIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQ 123
I + + G +++KIR LSN TN+ + ++ +A+LIAQ I+ Q
Sbjct: 330 IEIILRNRRIPYGYNSYLNEVQKIRSFLSNRTNTNTLIESVKIKSVYQSASLIAQDISFQ 389
Query: 124 LERRV-VFRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
FR + V+ M G +G+++ SGRL GAE++RTEC G+
Sbjct: 390 PRNNQISFRSIFSKVVKDIPIIMPKGVEGIRICCSGRLGGAEIARTECGKYGKTSRNVFN 449
Query: 180 AHIDYGTAVAETAYGSCGIKVYVS 203
IDY A T YG G+KV +S
Sbjct: 450 QKIDYAPAEVSTRYGISGVKVRIS 473
>gi|327281458|ref|XP_003225465.1| PREDICTED: 40S ribosomal protein S3-like [Anolis carolinensis]
Length = 243
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|302749015|gb|ADL63987.1| ribosomal protein S3 [Sarracenia flava]
Length = 475
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 51/174 (29%), Positives = 85/174 (48%), Gaps = 6/174 (3%)
Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90
LL +D K+ E ++ + G+ ++ I+ II+ + R +++K+R
Sbjct: 304 NLLGKD-KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNYYLNEVKKMRSL 361
Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGA 146
LSN TN+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G
Sbjct: 362 LSNRTNTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGV 421
Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200
+G+++ SGRL GAE++RTEC G+ IDY A T YG G+KV
Sbjct: 422 EGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKV 475
>gi|197128026|gb|ACH44524.1| putative ribosomal protein S3 [Taeniopygia guttata]
gi|197128027|gb|ACH44525.1| putative ribosomal protein S3 [Taeniopygia guttata]
gi|197128028|gb|ACH44526.1| putative ribosomal protein S3 [Taeniopygia guttata]
gi|197128029|gb|ACH44527.1| putative ribosomal protein S3 [Taeniopygia guttata]
Length = 243
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|302748611|gb|ADL63786.1| ribosomal protein S3 [Camellia japonica]
Length = 475
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 49/174 (28%), Positives = 83/174 (47%), Gaps = 6/174 (3%)
Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90
LL +D K+ E ++ + G+ ++ I II+ + R +++K+R
Sbjct: 304 NLLGKD-KVMELIEKFIDLGGIGEL-IRGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSL 361
Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGA 146
LSN TN+ + ++ +A+ IAQ I+ Q + FR + + + M+ G
Sbjct: 362 LSNRTNTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSILSKIVKDIPLVMKKGV 421
Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200
+G+++ SGR GAE++RTEC G+ IDY A T YG G+KV
Sbjct: 422 EGIRICCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKV 475
>gi|325117891|emb|CBZ53442.1| SSU ribosomal protein S3P, related [Neospora caninum Liverpool]
Length = 235
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 41/208 (19%), Positives = 83/208 (39%), Gaps = 22/208 (10%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L C L + G + + + T II+ + R ++G KG I ++ +
Sbjct: 25 EFLSCTLSEDGYSGVEVRVTPIRTEIIIRATRTREVLGDKGRRIRELTSVVQKRFGFAPD 84
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L V + A A+S+ +L + + RRA ++ M GA G +V+ SG+L
Sbjct: 85 SVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGVLRHIMESGAKGCEVVVSGKL 144
Query: 158 NGAELSRTECYLEGR--VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD--------- 206
A+ +++ + +G + + +D + G G++V + L
Sbjct: 145 R-AQRAKSMKFKDGYLISTGEPSKMFVDQAIRSVQLRQGVLGVRVKIMLPHDPEGKRGPA 203
Query: 207 -------EVSDSDSTIPAAEHRVVEKDS 227
V D IP + +++ +
Sbjct: 204 TPLPDTIIVMDPKPEIPVVQPEEMDEGA 231
>gi|197632571|gb|ACH71009.1| ribosomal protein S3-2 [Salmo salar]
gi|209732816|gb|ACI67277.1| 40S ribosomal protein S3 [Salmo salar]
gi|223647360|gb|ACN10438.1| 40S ribosomal protein S3 [Salmo salar]
Length = 245
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M G+ G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGSRGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|255546003|ref|XP_002514061.1| 40S ribosomal protein S3, putative [Ricinus communis]
gi|223546517|gb|EEF48015.1| 40S ribosomal protein S3, putative [Ricinus communis]
Length = 233
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 6/169 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E L L + G + + + T II+ + R ++G+KG I ++ +K +
Sbjct: 24 EVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPEN 83
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L
Sbjct: 84 SVELYAEKVNSRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL 143
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
A+ +++ + +G + Q ++ +ID G GIKV + L
Sbjct: 144 R-AQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKVKIML 191
>gi|44967199|gb|AAS49566.1| ribosomal protein S3 [Protopterus dolloi]
Length = 211
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 76/183 (41%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE-- 98
E+L L + G + + + T II+ + R ++G KG I ++ +
Sbjct: 13 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGGKGRRIRELTAVVQKRFGFPEA 72
Query: 99 -IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 73 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 132
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 133 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 191
Query: 212 DST 214
Sbjct: 192 KPL 194
>gi|295154300|gb|ADF83059.1| ribosomal protein S3 [Reederochloa eludens]
Length = 101
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 41/101 (40%), Positives = 64/101 (63%)
Query: 93 NMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVI 152
N N +++++ +V +P ++A+ IA QL+ RV FR+AMK+A++ + GVK+
Sbjct: 1 NSVNQRLNIAIEKVKEPYRQPNILAEYIAFQLKNRVSFRKAMKKAIELTKKADIKGVKIK 60
Query: 153 ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAY 193
+GRL G E++R EC +GR+PLQT+RA IDY T Y
Sbjct: 61 IAGRLGGKEIARAECIKKGRLPLQTIRAKIDYCCYPIRTIY 101
>gi|74272607|gb|ABA01099.1| 40S ribosomal protein S3 [Chlamydomonas incerta]
Length = 230
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 45/186 (24%), Positives = 76/186 (40%), Gaps = 13/186 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E L L + G + + + T II+ + R ++G+KG
Sbjct: 13 ADGVFYAEL-------NELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 65
Query: 84 IEKIRKKLSNMTNSE---IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ + N + L +V + A A+S+ +L + RRA ++
Sbjct: 66 IRELTSVVQKRFNFPPDSVELYAEKVSDRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +VI SG+L A +++ + +G + R +ID G GI
Sbjct: 126 VMESGAKGCEVIVSGKLRAA-RAKSMKFKDGYMVSSGHPARVYIDGAVRHVLLRQGVLGI 184
Query: 199 KVYVSL 204
KV +
Sbjct: 185 KVKIMK 190
>gi|302748621|gb|ADL63791.1| ribosomal protein S3 [Capparis cynophallophora]
Length = 505
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 44/180 (24%), Positives = 82/180 (45%), Gaps = 9/180 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + + +I + I + + G+ +++ +R LSN T
Sbjct: 323 KVMELIEKFIN---LGRIEEWIKVIDMMIEIILRKRGIPYRYNSYFYEVKIMRSFLSNRT 379
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRA---MKRAVQSAMRFGADGVKV 151
N++ + ++ +A+LIAQ I+ QL +R F + + + M+ G +G+++
Sbjct: 380 NTKTLIESVKIKSVYQSASLIAQDISFQLRNKRRSFHSIYTLLVKEIAFLMKKGVEGIRI 439
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
SGRL AE ++T CY G+ IDY A T YG G+KV++ +
Sbjct: 440 CFSGRLKDAEKAKTHCYKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWILYSKKKGGR 499
>gi|44968137|gb|AAS49584.1| ribosomal protein S3 [Gallus gallus]
Length = 211
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 78/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 13 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 72
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 73 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 132
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV ++L ++
Sbjct: 133 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKITLPWDPSGKIGPK 191
Query: 212 DST 214
Sbjct: 192 KPL 194
>gi|223927997|gb|ACN23650.1| ribosomal protein S3 [Halimeda hummii]
Length = 150
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 8/139 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S W+A Y + ED +R L K+A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSXWYASKRXYSKYVLEDNFVRTILSEKYKRAKFEKIPISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT-------NSEIHLSVNEVPKPEIN 112
+ I++++ + ++IGKK ++E +K + + + + +
Sbjct: 61 IXDHLEIVIHAQKLDILIGKKSENLEIFQKXIKKFIFQYRQXEWNSKLKVILYIFRCXNT 120
Query: 113 ATLIAQSIAQQLERRVVFR 131
A+ IA I + LE+RV ++
Sbjct: 121 ASSIADFIVEHLEKRVPYK 139
>gi|315425856|dbj|BAJ47509.1| small subunit ribosomal protein S3 [Candidatus Caldiarchaeum
subterraneum]
gi|315427714|dbj|BAJ49310.1| small subunit ribosomal protein S3 [Candidatus Caldiarchaeum
subterraneum]
Length = 203
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 57/189 (30%), Positives = 87/189 (46%), Gaps = 6/189 (3%)
Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE 98
I EYL+ LK A + I T R+ +Y+ RP +IG KG I++I + L E
Sbjct: 17 IEEYLREKLKNAFFGGVSISFTPLGTRVTIYAMRPSRVIGPKGKVIKEITEALEKQFGVE 76
Query: 99 IHLSVNEVPKPE-INATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ + +N ++A+ IAQ L R + +RR AV+ M GA GV+V SG+L
Sbjct: 77 NPVVTVVEVEVPELNPYVMAERIAQDLARGLRYRRVGFWAVKRIMEAGAKGVEVHISGKL 136
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
A SRTE + EG +P A ++Y G + G G++V + D +
Sbjct: 137 TSA-RSRTEKFTEGFMPKSGELA-MNYVLEGKSSVLLKTGLFGVRVLIYPPDAPLPEEIK 194
Query: 215 IPAAEHRVV 223
+ E
Sbjct: 195 VKQIEAPRA 203
>gi|264667327|gb|ACY71249.1| ribosomal protein S3 [Chrysomela tremulae]
Length = 240
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 42/191 (21%), Positives = 82/191 (42%), Gaps = 7/191 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+K I ++ + N
Sbjct: 23 EFLTRELSEDGYSGVEVRVTPTRTEIIIMATRTDRVLGEKNRRIRELTSVVQKRFNFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVVLYGEKVANRGLCAIAQAESLRFKLIGGLAVRRACYGVLRYIMECGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR-DEVSDSDST 214
G + +++ +++G + ++D T G GIKV + L D +
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQGVLGIKVKIMLPWDATGKTGPK 201
Query: 215 IPAAEHRVVEK 225
P ++ V +
Sbjct: 202 KPLPDNVAVAE 212
>gi|11466568|ref|NP_066458.1| ribosomal protein S3 [Rhodomonas salina]
gi|10444155|gb|AAG17729.1|AF288090_5 ribosomal protein S3 [Rhodomonas salina]
Length = 202
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/201 (22%), Positives = 84/201 (41%), Gaps = 4/201 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
M ++ N RL +N W S WF+ S+Y L DL I +Y H +
Sbjct: 1 MTKRSNTNNLRLMLNKDWVSNWFSEKSQYPIFLQNDLIIYKYFFWHYYFKESLLKMRIIR 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I+ + I K + I L + + + N+ IA+ I
Sbjct: 61 FSRKIILFFLISYDRKIMLKDFKLNLNTFLFKA---KNIFLVLYKNKFFKSNSFYIAKKI 117
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
A +E +V FR + + + + + + V+ GR+NG E+++ + ++G +P Q
Sbjct: 118 ATLIENKVRFRSTVVKKLLNDAKL-VKSLLVVCKGRINGVEMAKKDFLVKGSIPFQKFHV 176
Query: 181 HIDYGTAVAETAYGSCGIKVY 201
+++ +A T GS +KV+
Sbjct: 177 KLNFSQVIANTLKGSVIVKVW 197
>gi|74219656|dbj|BAE29595.1| unnamed protein product [Mus musculus]
Length = 243
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 78/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E+L L + G + + + T II+ + R ++G+KG I ++ ++
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQERFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|225444782|ref|XP_002279950.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|297738588|emb|CBI27833.3| unnamed protein product [Vitis vinifera]
Length = 234
Score = 96.6 bits (239), Expect = 3e-18, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 6/169 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E L L + G + + + T II+ + R ++G+KG I ++ +K +
Sbjct: 23 EVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPEN 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L
Sbjct: 83 SVELYAEKVNNRGLCAVAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
A+ +++ + +G + Q ++ +ID G GIKV + L
Sbjct: 143 R-AQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQGVLGIKVKIML 190
>gi|328541232|gb|AEB21840.1| ribosomal protein S3 [Telaranea diacantha]
Length = 374
Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 64/125 (51%), Gaps = 1/125 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE++ TE G L IDY A YG G+
Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAETEYKKYGETSLHVFSDQIDYAKTQASAPYGILGV 369
Query: 199 KVYVS 203
KV+VS
Sbjct: 370 KVWVS 374
>gi|71895095|ref|NP_001026007.1| 40S ribosomal protein S3 [Gallus gallus]
gi|53133686|emb|CAG32172.1| hypothetical protein RCJMB04_19g1 [Gallus gallus]
Length = 244
Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDTSGKIGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|302748701|gb|ADL63831.1| ribosomal protein S3 [Didymeles perrieri]
Length = 477
Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 77/171 (45%), Gaps = 9/171 (5%)
Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNM 94
K+ E ++ + + ++ I + + + G +++K+R LSN
Sbjct: 310 KKVMELIEKFIDLGRIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEVKKMRSLLSNR 366
Query: 95 TNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVK 150
TN+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G++
Sbjct: 367 TNTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIPLVMQKGVEGIR 426
Query: 151 VIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVY 201
+ SGR GAE++RTEC G+ IDY A T YG G+KV
Sbjct: 427 ICCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVR 477
>gi|13449298|ref|NP_085481.1| ribosomal protein S3 [Arabidopsis thaliana]
gi|6851009|emb|CAA69755.3| ribosomal protein S3 [Arabidopsis thaliana]
Length = 556
Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 4/169 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
KI E ++ G+ ++ I+ II+ +++K+R LSN TN+
Sbjct: 375 KIMELIEKLKNLGGIEEL-IKVIDMMIEIILRKRGIPYRYNSYFYEVKKMRSFLSNRTNT 433
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156
+ + ++ +A+ IAQ I+ QL+ +R F + V+ + G +G+++ SGR
Sbjct: 434 KTLIESVKIKSVYQSASPIAQDISFQLKNKRRSFHSIFAKIVKEIPK-GVEGIRICFSGR 492
Query: 157 LN-GAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
L AE ++T+CY + IDY A T YG G+KV++S
Sbjct: 493 LKDAAEKAQTKCYKHRKTSRNVFNHKIDYAPAEVSTRYGISGVKVWISY 541
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 51/154 (33%), Gaps = 20/154 (12%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54
M +K NPI RLG N + +S F+ YG +++D+ +R Y + +
Sbjct: 1 MARKGNPISVRLGKNRSSDSSRFSEYY-YGKFVYQDVNLRSYFGSIRPPTRLTFGFRLGR 59
Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINAT 114
+I K R ++ P K + + K+ + E +
Sbjct: 60 CIILHFPK--RTFIHFFLPRRPRRLKRREKTRPGKEKGRWWTTFGKAGPIECLHSSDDTE 117
Query: 115 LIAQSIAQQLERRVVFR-RAMKRAVQSAMRFGAD 147
E R R R ++ V+S
Sbjct: 118 ----------EERNEVRGRGARKRVESIRLDDRK 141
>gi|115473289|ref|NP_001060243.1| Os07g0608500 [Oryza sativa Japonica Group]
gi|14192875|gb|AAK55780.1|AC079038_14 Putative 40S ribosomal protein; contains C-terminal domain [Oryza
sativa]
gi|34394183|dbj|BAC84635.1| putative 40S ribosomal protein [Oryza sativa Japonica Group]
gi|50509862|dbj|BAD32034.1| putative 40S ribosomal protein [Oryza sativa Japonica Group]
gi|113611779|dbj|BAF22157.1| Os07g0608500 [Oryza sativa Japonica Group]
gi|125559132|gb|EAZ04668.1| hypothetical protein OsI_26820 [Oryza sativa Indica Group]
gi|125601033|gb|EAZ40609.1| hypothetical protein OsJ_25071 [Oryza sativa Japonica Group]
gi|215694983|dbj|BAG90174.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 233
Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 6/169 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E L L + G + + + T II+ + R ++G+KG I ++ + N +
Sbjct: 25 EMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPEN 84
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L
Sbjct: 85 GVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKL 144
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
A+ +++ + +G + + +ID G GIKV + L
Sbjct: 145 R-AQRAKSMKFKDGYMISSGYPVNLYIDSAVRHVLLRQGVLGIKVKIML 192
>gi|302748770|gb|ADL63865.1| ribosomal protein S3 [Gunnera monoica]
Length = 467
Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 9/166 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSE 98
E + + G+ + I + + G +++K+R LSN TN+
Sbjct: 305 ELIDKFIDLGGIGE---WIKGIEMMIEIILRNRIIPYGYNSYLNEVKKMRSLLSNRTNTN 361
Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIAS 154
+ ++ +A+LIAQ I+ QL + FR + V+ M+ G +G+++ S
Sbjct: 362 TLIESVKIKSFYQSASLIAQDISFQLRNKTRSFRSIFSQIVKDIPLVMKKGVEGIRICCS 421
Query: 155 GRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200
GR GAE++RTEC G+ IDY A T YG G+KV
Sbjct: 422 GRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKV 467
>gi|32532|emb|CAA39248.1| unnamed protein product [Homo sapiens]
Length = 243
Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 76/183 (41%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+ + +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAECLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|47211107|emb|CAF94963.1| unnamed protein product [Tetraodon nigroviridis]
Length = 245
Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIVPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|1507663|dbj|BAA12250.1| ribosomal protein S3 [Arabidopsis thaliana]
Length = 531
Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 46/169 (27%), Positives = 81/169 (47%), Gaps = 4/169 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
KI E ++ G+ ++ I+ II+ +++K+R LSN TN+
Sbjct: 350 KIMELIEKLKNLGGIEEL-IKVIDMMIEIILRKRGIPYRYNSYFYEVKKMRSFLSNRTNT 408
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156
+ + ++ +A+ IAQ I+ QL+ +R F + V+ + G +G+++ SGR
Sbjct: 409 KTLIESVKIKSVYQSASPIAQDISFQLKNKRRSFHSIFAKIVKEIPK-GVEGIRICFSGR 467
Query: 157 LN-GAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
L AE ++T+CY + IDY A T YG G+KV++S
Sbjct: 468 LKDAAEKAQTKCYKHRKTSRNVFNHKIDYAPAEVSTRYGISGVKVWISY 516
>gi|155369251|ref|NP_001094409.1| 40S ribosomal protein S3-A [Xenopus laevis]
gi|133940|sp|P02350|RS31_XENLA RecName: Full=40S ribosomal protein S3-A; AltName: Full=S1A
gi|65091|emb|CAA40592.1| ribosomal protein S1a [Xenopus laevis]
gi|27769401|gb|AAH42230.1| Ribosomal protein S1a protein [Xenopus laevis]
Length = 246
Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|302761098|ref|XP_002963971.1| hypothetical protein SELMODRAFT_270414 [Selaginella moellendorffii]
gi|302768543|ref|XP_002967691.1| hypothetical protein SELMODRAFT_270666 [Selaginella moellendorffii]
gi|302769059|ref|XP_002967949.1| hypothetical protein SELMODRAFT_270664 [Selaginella moellendorffii]
gi|300164429|gb|EFJ31038.1| hypothetical protein SELMODRAFT_270666 [Selaginella moellendorffii]
gi|300164687|gb|EFJ31296.1| hypothetical protein SELMODRAFT_270664 [Selaginella moellendorffii]
gi|300167700|gb|EFJ34304.1| hypothetical protein SELMODRAFT_270414 [Selaginella moellendorffii]
Length = 230
Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 48/212 (22%), Positives = 87/212 (41%), Gaps = 17/212 (8%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E L L + G + + + T II+ + R ++G+KG
Sbjct: 13 ADGVFYAEL-------NELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQSVLGEKGRR 65
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + S + L +V + A A+S+ +L + RRA ++
Sbjct: 66 IRELTSVVQKRFSFPESTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +VI SG+L A+ +++ + +G + + ID G GI
Sbjct: 126 IMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGSPVNEFIDRAVRHVLLRQGVLGI 184
Query: 199 KVYVSL----RDEVSDSDSTIPAAEHRVVEKD 226
KV + L + + S +V +++
Sbjct: 185 KVKIMLDWDPKGKTGPSTPLPDMVTIQVPKEE 216
>gi|90080277|dbj|BAE89620.1| unnamed protein product [Macaca fascicularis]
Length = 243
Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 6/170 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
G + +++ +++G + + ++D G GIKV + L
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLP 191
>gi|302748780|gb|ADL63870.1| ribosomal protein S3 [Heisteria parvifolia]
Length = 472
Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 47/167 (28%), Positives = 80/167 (47%), Gaps = 5/167 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 307 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 365
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++
Sbjct: 366 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 425
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200
SGR GAE++RTEC G+ IDY A T YG G+KV
Sbjct: 426 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKV 472
>gi|302749087|gb|ADL64023.1| ribosomal protein S3 [Thottea tomentosa]
Length = 475
Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 43/172 (25%), Positives = 76/172 (44%), Gaps = 9/172 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E + + G+ + I + + G +++K+R LSN +
Sbjct: 307 KVMELIDKFIDLGGIGEF---LKGIEMMIEIILKNRRIPYGYNSYLNEVQKMRSFLSNFS 363
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
++ + ++ +A+ IAQ I+ Q + FR + V+ M G +G+++
Sbjct: 364 YTKTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIPLVMPKGVEGIRI 423
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RTEC G+ IDY + T YG G+KV +S
Sbjct: 424 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYASTEVSTRYGISGVKVRIS 475
>gi|302748774|gb|ADL63867.1| ribosomal protein S3 [Hedera helix]
Length = 478
Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 46/167 (27%), Positives = 79/167 (47%), Gaps = 5/167 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN T +
Sbjct: 313 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTKT 371
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++
Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFNQIVKDIPLVMKKGVEGIRICC 431
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200
SGR GAE++RTEC G+ IDY A T YG G+KV
Sbjct: 432 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKV 478
>gi|170057463|ref|XP_001864493.1| 40S ribosomal protein S3 [Culex quinquefasciatus]
gi|167876891|gb|EDS40274.1| 40S ribosomal protein S3 [Culex quinquefasciatus]
Length = 250
Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 39/183 (21%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRELTAVVQKRFGFAPG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 TVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + ++D T G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKVKIMLPWDPNGKIGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|27735393|gb|AAH41299.1| Rpls3-b protein [Xenopus laevis]
gi|213626632|gb|AAI69756.1| Rpls3-b protein [Xenopus laevis]
gi|213627669|gb|AAI69758.1| Rpls3-b protein [Xenopus laevis]
Length = 246
Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|272716622|gb|ACZ95616.1| ribosomal protein S3 [Calocedrus decurrens]
Length = 613
Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 9/152 (5%)
Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + + G ++ K+R LS TN+ + ++ +A+ IAQ I
Sbjct: 460 GMMIRIIPKNRRIPYGYNYYLNEVRKMRSLLSGGTNANTFIGSVKIKYVYQSASPIAQDI 519
Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173
+ Q FR + V++ R G G+++ GRL GAE++RTEC G+
Sbjct: 520 SFQPRDGTRSFRSIFWKIVRNLSLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKT 579
Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
T R IDY A T YG G+KV++
Sbjct: 580 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 611
>gi|302749063|gb|ADL64011.1| ribosomal protein S3 [Stylobasium spathulatum]
Length = 493
Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 45/167 (26%), Positives = 82/167 (49%), Gaps = 5/167 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ + ++ + + ++ I+ II+ + + +++K+R LSN TN+
Sbjct: 328 KVMKLIEKFIDLGRIGEL-IKGIEMMIEIILRNRKIPYGYNSYLNEVKKMRSLLSNRTNT 386
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL ++ FR + V+ M+ G +G+++
Sbjct: 387 NTLIESVKIKSVYQSASPIAQDISFQLRKKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 446
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200
SGR GAE++RTEC G+ IDY +A T YG G+KV
Sbjct: 447 SGRSKGAEIARTECGKYGKTSRYVFNQKIDYASAEVSTRYGISGVKV 493
>gi|147903619|ref|NP_001085315.1| 40S ribosomal protein S3-B [Xenopus laevis]
gi|1350988|sp|P47835|RS32_XENLA RecName: Full=40S ribosomal protein S3-B; AltName: Full=S1B
gi|587600|emb|CAA84291.1| ribosomal protein S1 [Xenopus laevis]
gi|587602|emb|CAA84290.1| ribosomal protein [Xenopus laevis]
Length = 246
Score = 95.8 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTQTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|255638159|gb|ACU19393.1| unknown [Glycine max]
Length = 236
Score = 95.8 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 6/169 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E L L + G + + + T II+ + R ++G+KG I ++ +K +
Sbjct: 23 EVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLGEKGRRIRELTSVVQKRFKFPEN 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RR ++ M GA G +VI SG+L
Sbjct: 83 SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRVCYGVLRFVMESGAKGCEVIVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
A+ +++ + +G + Q ++ +ID G GIKV + L
Sbjct: 143 R-AQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKVKIML 190
>gi|45360887|ref|NP_989119.1| ribosomal protein S3 [Xenopus (Silurana) tropicalis]
gi|38512247|gb|AAH61265.1| ribosomal protein S3 [Xenopus (Silurana) tropicalis]
gi|89271265|emb|CAJ82962.1| ribosomal protein S3 [Xenopus (Silurana) tropicalis]
Length = 246
Score = 95.8 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|217071466|gb|ACJ84093.1| unknown [Medicago truncatula]
Length = 239
Score = 95.8 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 77/169 (45%), Gaps = 6/169 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E L L + G + + + T II+ + R ++G+KG I ++ +K +
Sbjct: 23 EVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLGEKGRRIRELTSVVQKRFKFPEN 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L
Sbjct: 83 SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
A+ +++ + +G + Q ++ +ID G GIKV + L
Sbjct: 143 R-AQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKVKIML 190
>gi|328862650|gb|EGG11751.1| hypothetical protein MELLADRAFT_70763 [Melampsora larici-populina
98AG31]
Length = 269
Score = 95.8 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 39/187 (20%), Positives = 73/187 (39%), Gaps = 13/187 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ L + G + + TH +I+ + ++G+KG
Sbjct: 12 ADGVFYAEL-------SEFFTRELSEEGYSGCEVRVTHARTEVIIRATHTQEVLGQKGRR 64
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + L +V + + A +S+ +L + RRA ++
Sbjct: 65 IRELTSLVQKRFKFPEGSVELYAEKVQQRGLCAVAQCESLRYKLLGGLAVRRACYGVLRF 124
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M A G +V+ SG+L A +++ + +G + Q +D G GI
Sbjct: 125 IMESNAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPCVDFVDQAVRHVLLRQGVLGI 183
Query: 199 KVYVSLR 205
KV +
Sbjct: 184 KVKIMRG 190
>gi|302748637|gb|ADL63799.1| ribosomal protein S3 [Ceratophyllum submersum]
Length = 505
Score = 95.8 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 6/158 (3%)
Query: 52 VAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKP 109
+I I + + G +++K+R LSN TN+ ++ ++
Sbjct: 348 CGRIGNLIKGIEMMIEIILRNRRIPYGYNSYLNEVQKMRSLLSNRTNTNTNIESVKIQSV 407
Query: 110 EINATLIAQSIAQQLERR-VVFRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRT 165
+A+ IAQ I+ + + FR + + VQ M G +G+ + SGR +GAE++RT
Sbjct: 408 YQSASPIAQDISLKPRNNLISFRAILSQIVQDIPLDMPKGVEGIIICCSGRSSGAEIART 467
Query: 166 ECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
EC G+ IDY A T YG G+KV +S
Sbjct: 468 ECGKYGKTSCNVFNQKIDYAPAPVSTRYGISGVKVRIS 505
>gi|302748999|gb|ADL63979.1| ribosomal protein S3 [Roussea simplex]
Length = 478
Score = 95.8 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 13/178 (7%)
Query: 40 REYLQCHLKQAGVAKILIERTHKNCRII-------VYSARPGLIIGKKGT--DIEKIRKK 90
R ++ + K I+ K I + + + G +++K+R
Sbjct: 288 RALIKKDQVIVKLKKKFIDLRGKGEFIKGVEMLMEIILKKRRIPYGYNFYLNEVKKMRSL 347
Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGA 146
LSN T + ++ ++ +A+ IAQ I+ Q + FR + + + M+ G
Sbjct: 348 LSNRTKTNTNIESVKIQSVYQSASPIAQDISFQPRHKTRSFRSILSQIVKDIPLVMKKGV 407
Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
+G+++ SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 408 EGIRICCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISY 465
>gi|254733583|ref|ZP_05191303.1| 30S ribosomal protein S3 [Bacillus anthracis str. Western North
America USA6153]
Length = 61
Score = 95.8 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 35/62 (56%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI R+GV W SRWFA +Y LLHED+KIREY+ LK + VAK+ IER
Sbjct: 1 MGQKVNPIGLRVGVIRDWESRWFAE-KDYATLLHEDIKIREYINVRLKDSAVAKVEIERA 59
Query: 61 HK 62
Sbjct: 60 AN 61
>gi|302748695|gb|ADL63828.1| ribosomal protein S3 [Degeneria roseiflora]
Length = 450
Score = 95.8 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 47/170 (27%), Positives = 80/170 (47%), Gaps = 5/170 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + R +++KIR LSN TN+
Sbjct: 282 KVMELIEKFIDLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVQKIRSLLSNRTNT 340
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS---AMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M G +G+++
Sbjct: 341 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDMKFVMPKGVEGIRICC 400
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RT+C G+ IDY A T YG G+KV +S
Sbjct: 401 SGRSEGAEIARTKCGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 450
>gi|260833516|ref|XP_002611703.1| hypothetical protein BRAFLDRAFT_56803 [Branchiostoma floridae]
gi|229297074|gb|EEN67713.1| hypothetical protein BRAFLDRAFT_56803 [Branchiostoma floridae]
Length = 226
Score = 95.8 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 39/189 (20%), Positives = 80/189 (42%), Gaps = 11/189 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTSVVQKRFGFAEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 TVELYAEKVAQRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
G + +++ +++G + + +++D G GIKV + D T
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGEPANSYVDSAVRHVMLRQGVLGIKVKIM-----LPWDPTG 196
Query: 216 PAAEHRVVE 224
+ +
Sbjct: 197 KTGPKKPLP 205
>gi|272716650|gb|ACZ95637.1| ribosomal protein S3 [Cryptomeria japonica]
Length = 604
Score = 95.8 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + + G ++ K+R LS TN+ + ++ +A+ IAQ I
Sbjct: 451 GMMIRIIPKNRKIPYGYNYYLNEVRKMRSLLSGGTNANTFIGSVKIKSVYQSASPIAQDI 510
Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173
+ Q FR + V+ R G G+++ GRL GAE++RTEC G+
Sbjct: 511 SFQPRDGTRSFRSIFWKIVRDISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKT 570
Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
T R IDY A T YG G+KV++
Sbjct: 571 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 602
>gi|272716638|gb|ACZ95628.1| ribosomal protein S3 [Taiwania cryptomerioides]
Length = 604
Score = 95.8 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + + G ++ K+R LS TN+ + ++ +A+ IAQ I
Sbjct: 451 GMMIRIIPKNRRIPYGYNYYLNEVRKMRSLLSGGTNANTFIGSVKIKSVYQSASPIAQDI 510
Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173
+ Q FR + V+ R G G+++ GRL GAE++RTEC G+
Sbjct: 511 SFQPRDGTRSFRSIFWKIVRDISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKT 570
Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
T R IDY A T YG G+KV++
Sbjct: 571 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 602
>gi|37724563|gb|AAO20336.1| ribosomal protein S3 [Hydra vulgaris]
Length = 238
Score = 95.8 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 41/189 (21%), Positives = 78/189 (41%), Gaps = 11/189 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L+ L + G + + + T II+ + R ++G+KG I ++ + N
Sbjct: 22 EFLKRELAEDGYSGVEVRVTPLRTEIIILATRTQNVLGEKGRRIRELTSVVQKRFNFPEG 81
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A +S+ +L R+A V+ M GA G +VI SG+L
Sbjct: 82 SVELYAEKVATRGLCAIAQCESLRYKLLAGAPVRKACYGVVRFIMESGAKGCEVIVSGKL 141
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
G + +++ + +G + ++ +ID G GIKV + D T
Sbjct: 142 RG-QRAKSMKFTDGFMIHSGYPIQEYIDTAVRHVYLRQGVLGIKVKIM-----LPWDPTG 195
Query: 216 PAAEHRVVE 224
+ +
Sbjct: 196 KTGPKKPLP 204
>gi|157118129|ref|XP_001659022.1| 40S ribosomal protein S3 [Aedes aegypti]
gi|70906313|gb|AAZ14892.1| ribosomal protein S3 [Aedes aegypti]
gi|108875827|gb|EAT40052.1| 40S ribosomal protein S3 [Aedes aegypti]
Length = 243
Score = 95.8 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 39/183 (21%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRELTAVVQKRFGFAPG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 TVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + ++D T G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKVKIMLPWDPNGKIGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|302748800|gb|ADL63880.1| ribosomal protein S3 [Hydrolea ovata]
Length = 436
Score = 95.8 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 86/166 (51%), Gaps = 5/166 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ + K I++ + R +++K+++ LSN T +
Sbjct: 272 KVMELIEKFIDLGRIGEL-IKVSQKMIEIMLRNRRIPSEYSSYLNEVKKMQEVLSNRTKT 330
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRA---MKRAVQSAMRFGADGVKVIA 153
+ ++ +A+LIAQ I+ Q ++ FR + R ++ M+ G +G+++
Sbjct: 331 NTLIESVKIQSVYQSASLIAQDISFQPRLKKKTFRSILTKIVRDIRLVMKKGVEGIRISC 390
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIK 199
SGRL+GAE++RTEC G+ IDY +A T YG G+K
Sbjct: 391 SGRLSGAEIARTECVKYGKTSCNVFNQKIDYASAEVSTRYGILGVK 436
>gi|302748635|gb|ADL63798.1| ribosomal protein S3 [Ceratophyllum demersum]
Length = 510
Score = 95.8 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 6/158 (3%)
Query: 52 VAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKP 109
+I I + + G +++K+R LSN TN+ ++ ++
Sbjct: 353 CGRIGNLIKGIEMMIEIILRNRRIPYGYNSYLNEVQKMRSLLSNRTNTNTNIESVKIQSV 412
Query: 110 EINATLIAQSIAQQLERR-VVFRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRT 165
+A+ IAQ I+ + + FR + + VQ M G +G+ + SGR +GAE++RT
Sbjct: 413 YQSASPIAQDISLKPRNNLISFRAILSQIVQDIPLDMPKGVEGIIICCSGRSSGAEIART 472
Query: 166 ECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
EC G+ IDY A T YG G+KV +S
Sbjct: 473 ECGKYGKTSCNVFNQKIDYAPAPVSTRYGISGVKVRIS 510
>gi|296217041|ref|XP_002754860.1| PREDICTED: 40S ribosomal protein S3-like [Callithrix jacchus]
Length = 243
Score = 95.8 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 76/183 (41%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M A G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESSAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|221126927|ref|XP_002162713.1| PREDICTED: similar to ribosomal protein S3 [Hydra magnipapillata]
Length = 239
Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 41/189 (21%), Positives = 78/189 (41%), Gaps = 11/189 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L+ L + G + + + T II+ + R ++G+KG I ++ + N
Sbjct: 23 EFLKRELAEDGYSGVEVRVTPLRTEIIILATRTQNVLGEKGRRIRELTSVVQKRFNFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A +S+ +L R+A V+ M GA G +VI SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQCESLRYKLLAGAPVRKACYGVVRFIMESGAKGCEVIVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
G + +++ + +G + ++ +ID G GIKV + D T
Sbjct: 143 RG-QRAKSMKFTDGFMIHSGYPIQEYIDTAVRHVYLRQGVLGIKVKIM-----LPWDPTG 196
Query: 216 PAAEHRVVE 224
+ +
Sbjct: 197 KTGPKKPLP 205
>gi|302749121|gb|ADL64040.1| ribosomal protein S3 [Xanthosoma mafaffa]
Length = 479
Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 46/179 (25%), Positives = 84/179 (46%), Gaps = 10/179 (5%)
Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIR 88
L+ +D + E ++ + G+ ++ I + + + G +++K+R
Sbjct: 305 NLMGKDKALAELIEKFIDLGGIGELNKGI---EMMIEIILRKRRIPYGYNSYLNEVKKMR 361
Query: 89 KKLSNMTNS-EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRA---MKRAVQSAMRF 144
LSN T++ + ++ +A+ IAQ I+ Q R+ FR + + + M
Sbjct: 362 SFLSNRTHTASALIFSVKIKSVYQSASPIAQDISFQP-RKKSFRSIFSHIVKDIPLIMPK 420
Query: 145 GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
G +G+++ SGR GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 421 GVEGIRICCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVWIS 479
>gi|298714483|emb|CBJ27505.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 222
Score = 95.4 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 47/205 (22%), Positives = 82/205 (40%), Gaps = 18/205 (8%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E L L + G A + + T II+ + RP ++G+KG
Sbjct: 9 ADGVFYAEL-------NELLTQELAEEGYAGVEVRVTPLRTEIIISATRPQNVLGEKGQR 61
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K N + + L V K + A A+S+ +L + RRA ++
Sbjct: 62 IRELTSVVQKRFNFPDDAVELYAERVAKRGLCAQTQAESLKYKLLGGLAVRRACYGVLRF 121
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV-PLQTLRAH-IDYGTAVAETAYGSCGI 198
M GA G +VI +G+L A+ ++ + +G + +R +D+ G G+
Sbjct: 122 IMESGAKGAEVIVAGKLR-AQRAKAMKFRDGYMIKSGRVREDYVDHAVRHVMMRQGVLGV 180
Query: 199 KVYVSLRDEVSDSDSTIPAAEHRVV 223
V + D T +
Sbjct: 181 TVSIM-----LPHDPTGKEGPKTPL 200
>gi|221488638|gb|EEE26852.1| 40S ribosomal protein S3, putative [Toxoplasma gondii GT1]
Length = 255
Score = 95.4 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 41/207 (19%), Positives = 82/207 (39%), Gaps = 22/207 (10%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L C L + G + + + T II+ + R ++G KG I ++ +
Sbjct: 45 EFLSCTLSEDGYSGVEVRVTPIRTEIIIRATRTREVLGDKGRRIRELTSVVQKRFGFAPD 104
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L V + A A+S+ +L + + RRA ++ M GA G +V+ SG+L
Sbjct: 105 SVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGVLRHIMESGAKGCEVVVSGKL 164
Query: 158 NGAELSRTECYLEGR--VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD--------- 206
A+ +++ + +G + + +D + G G++V + L
Sbjct: 165 R-AQRAKSMKFKDGYLISTGEPSKMFVDQAIRSVQLRQGVLGVRVKIMLPHDPEGKRGPA 223
Query: 207 -------EVSDSDSTIPAAEHRVVEKD 226
V D IP + +++
Sbjct: 224 NPLPDTIIVMDPKPEIPVVQPEEMDEG 250
>gi|272716642|gb|ACZ95631.1| ribosomal protein S3 [Taxodium distichum var. imbricarium]
gi|272716646|gb|ACZ95634.1| ribosomal protein S3 [Taxodium distichum]
Length = 607
Score = 95.4 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + + G ++ K+R LS TN+ + ++ +A+ IAQ I
Sbjct: 454 GMMIRIIPKNRRIPYGYNYYLNEVRKMRSLLSGGTNANTFIGSVKIKSVYQSASPIAQDI 513
Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173
+ Q FR + V+ R G G+++ GRL GAE++RTEC G+
Sbjct: 514 SFQPRDGTRSFRSIFWKIVRDLSLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKT 573
Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
T R IDY A T YG G+KV++
Sbjct: 574 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 605
>gi|272716574|gb|ACZ95580.1| ribosomal protein S3 [Sequoia sempervirens]
Length = 632
Score = 95.4 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 9/152 (5%)
Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + + G ++ K+R LS TN+ + ++ +A+ IAQ I
Sbjct: 479 GMMIRIIPKNRRIPYGYNYYLNEVRKMRSLLSGGTNANTFIGSVKIKSVYQSASPIAQDI 538
Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173
+ Q FR + + V+ R G G+++ GRL GAE++RTEC G+
Sbjct: 539 SFQPRDGTRSFRSILWKIVRDISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKT 598
Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
T R IDY A T YG G+KV++
Sbjct: 599 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 630
>gi|171185213|ref|YP_001794132.1| 30S ribosomal protein S3P [Thermoproteus neutrophilus V24Sta]
gi|170934425|gb|ACB39686.1| ribosomal protein S3- domain protein [Thermoproteus neutrophilus
V24Sta]
Length = 224
Score = 95.4 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 60/204 (29%), Positives = 96/204 (47%), Gaps = 15/204 (7%)
Query: 29 YGALLHEDLK---IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIE 85
Y +L E+ K I+E+L+ L + G I +T RI++Y+ RP IIGKKG ++
Sbjct: 18 YKKILEENKKKWMIKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGKKGAIVK 77
Query: 86 KIRKKLSNMTNSEI----HLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSA 141
+I L N E + V+++ PE+ ++A IA + + V FRR M AV+
Sbjct: 78 EISNILMNKLGVENPQIDVIDVSKIEAPEMFPKVVAYRIANAMAKGVRFRRVMFVAVRQL 137
Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIK 199
M GA G +++ SG+L+ E +R E + G++ A + G GI+
Sbjct: 138 MEAGAKGFEIVVSGKLS-TERARFEKHTYGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIE 196
Query: 200 VYVS-----LRDEVSDSDSTIPAA 218
V ++ DE T P A
Sbjct: 197 VRIAPAALQYSDEYKIKPPTKPEA 220
>gi|126459168|ref|YP_001055446.1| 30S ribosomal protein S3P [Pyrobaculum calidifontis JCM 11548]
gi|126248889|gb|ABO07980.1| SSU ribosomal protein S3P [Pyrobaculum calidifontis JCM 11548]
Length = 220
Score = 95.4 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 15/204 (7%)
Query: 29 YGALLHEDLK---IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIE 85
Y +L E+ K I+E+L+ L + G I +T RI++Y+ RP IIG+KG ++
Sbjct: 15 YKKILEENKKKWMIKEFLEYRLAKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVK 74
Query: 86 KIRKKLSNMTNSEI----HLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSA 141
++ L+N E + V+++ PE+ ++A IA + R V FRR M AV+
Sbjct: 75 EVSSILANKLGVENPQIDVIDVSKIEAPELFPKVVAYRIANAMARGVRFRRVMFVAVRQL 134
Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIK 199
M GA G +++ SG+L+ E ++ E G++ A + G GI+
Sbjct: 135 MEAGAKGFEIVVSGKLS-TERAKFEKITYGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIE 193
Query: 200 VYV-----SLRDEVSDSDSTIPAA 218
V + DE T P A
Sbjct: 194 VRITPATLRYSDEYKIKPPTRPEA 217
>gi|300121261|emb|CBK21641.2| unnamed protein product [Blastocystis hominis]
gi|300176039|emb|CBK23350.2| unnamed protein product [Blastocystis hominis]
Length = 239
Score = 95.4 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 44/212 (20%), Positives = 80/212 (37%), Gaps = 15/212 (7%)
Query: 14 VNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARP 73
++ A G Y L E L L + G + + I ++ II+ + RP
Sbjct: 6 ISKKHQCV--ADGVFYAEL-------DELLNRELSEVGYSGVSIRKSTMKTEIIIRAPRP 56
Query: 74 GLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVF 130
IIG+ I ++ + + + L V + + A A+++ +L +
Sbjct: 57 QEIIGENSRRINELTALVQKRFGFNENNVVLYAERVAERSLCAQTQAEALKYRLLAGLPV 116
Query: 131 RRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAV 188
RRA ++SA+ GA G +VI SG+L + + + EG + + +D T
Sbjct: 117 RRAAYAVIRSALEAGAKGCEVIVSGKLR-QQRANAMKFKEGYMIKTGNACKEFVDEATRH 175
Query: 189 AETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
G G+KV + + A
Sbjct: 176 VLVKQGMLGVKVRIMKPTDPEGRLGPKKALPD 207
>gi|71744718|ref|XP_826989.1| 40S ribosomal protein S3 [Trypanosoma brucei TREU927]
gi|70831154|gb|EAN76659.1| 40S ribosomal protein S3, putative [Trypanosoma brucei]
Length = 266
Score = 95.4 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 78/183 (42%), Gaps = 6/183 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E+L+ L G A + T I++ S + ++G+KG I ++ ++ N
Sbjct: 74 EFLKRELADDGFAGVEHRVTPTRTEIVIRSTKTREVLGEKGRRIRELTACLQQRFNYKEG 133
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
++ L V ++A A+S+ +L + RRA ++ M GA G +V G++
Sbjct: 134 KLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIRYVMESGAKGCEVTIGGKI 193
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
G + +++ + +G + + +D T G+ G+ V + + + D +
Sbjct: 194 KG-QRAKSMTFRDGYMIKSGTAHKHFVDTATRHCHLRAGTIGVNVKIMRPQSMIEEDEVL 252
Query: 216 PAA 218
P
Sbjct: 253 PDV 255
>gi|302749123|gb|ADL64041.1| ribosomal protein S3 [Ximenia americana]
Length = 467
Score = 95.4 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 5/167 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 302 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILKNRRIPYGYNSYLNEVKKMRSLLSNRTNT 360
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + + + M+ G +G+++
Sbjct: 361 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSILSKIVKDIPLVMKKGVEGIRICC 420
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200
SGR GAE++RTEC G+ IDY A T YG G+KV
Sbjct: 421 SGRSEGAEIARTECGKYGKRSRNVFNQKIDYAPAEVSTRYGILGVKV 467
>gi|302748925|gb|ADL63942.1| ribosomal protein S3 [Oxalis sp. Qiu 94028]
Length = 473
Score = 95.4 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 48/165 (29%), Positives = 79/165 (47%), Gaps = 5/165 (3%)
Query: 40 REYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEI 99
E + + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 310 MELIDKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNTNT 368
Query: 100 HLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASG 155
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ SG
Sbjct: 369 LIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICCSG 428
Query: 156 RLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200
RL GAE++RTEC G+ IDY A T YG G+KV
Sbjct: 429 RLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKV 473
>gi|217071088|gb|ACJ83904.1| unknown [Medicago truncatula]
Length = 239
Score = 95.4 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 6/169 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E L L + G + + + T II+ + R ++G+KG I ++ +K +
Sbjct: 23 EVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQAVLGEKGRRIRELTSVVQKRFKFPEN 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RR ++ M GA G +VI SG+L
Sbjct: 83 SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRVCYGVLRFVMESGAKGCEVIVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
A+ +++ + +G + Q ++ +ID G GIKV + L
Sbjct: 143 R-AQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKVKIML 190
>gi|70906311|gb|AAZ14891.1| ribosomal protein S3 [Aedes albopictus]
Length = 243
Score = 95.4 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 39/183 (21%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRELTAVVQKRFGFAPG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 TVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + ++D T G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKVKIMLPWDPNGKIGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|302749109|gb|ADL64034.1| ribosomal protein S3 [Verbena bonariensis]
Length = 474
Score = 95.4 bits (236), Expect = 6e-18, Method: Composition-based stats.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 5/166 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 310 KVMELIEKFIDLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 368
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V++ M+ G G+++
Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQLRTKTRSFRSIFSKIVKNIPLVMKKGVTGIRICC 428
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIK 199
SGR GAE++RTEC G+ IDY A T YG G+K
Sbjct: 429 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVK 474
>gi|328541254|gb|AEB21851.1| ribosomal protein S3 [Telaranea lawesii]
Length = 371
Score = 95.4 bits (236), Expect = 6e-18, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 1/123 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ +EK++ S+ T + + ++ +A+LIAQ I+ +L ++ FR+ + +
Sbjct: 249 RYYYLEKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLGQKKSFRQICRSIFK 308
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G L IDY A T YG G+
Sbjct: 309 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 368
Query: 199 KVY 201
KV+
Sbjct: 369 KVW 371
>gi|153799846|gb|ABS50654.1| ribosomal protein S3 [Arabidopsis thaliana]
gi|153799848|gb|ABS50655.1| ribosomal protein S3 [Arabidopsis thaliana]
Length = 518
Score = 95.4 bits (236), Expect = 6e-18, Method: Composition-based stats.
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 4/167 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
KI E ++ G+ ++ I+ II+ +++K+R LSN TN+
Sbjct: 354 KIMELIEKLKNLGGIEEL-IKVIDMMIEIILRKRGIPYRYNSYFYEVKKMRSFLSNRTNT 412
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156
+ + ++ +A+ IAQ I+ QL+ +R F + V+ + G +G+++ SGR
Sbjct: 413 KTLIESVKIKSVYQSASPIAQDISFQLKNKRRSFHSIFAKIVKEIPK-GVEGIRICFSGR 471
Query: 157 LN-GAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202
L AE ++T+CY + IDY A T YG G+KV++
Sbjct: 472 LKDAAEKAQTKCYKHRKTSRNVFNHKIDYAPAEVSTRYGISGVKVWI 518
>gi|288191311|gb|ADC44008.1| ribosomal protein S3 [Soyauxia floribunda]
Length = 166
Score = 95.1 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 45/152 (29%), Positives = 73/152 (48%), Gaps = 4/152 (2%)
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I+ II+ + +++K+R LSN TN+ + ++ +A+ I
Sbjct: 9 IKGIEMMIEIILRNRIIPYRYNSYLKEVKKMRSLLSNRTNTNTLIESVKIKSVYQSASPI 68
Query: 117 AQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGR 172
AQ I+ Q + FR + V+ M+ G +G+++ SGRL GAE++RTEC G+
Sbjct: 69 AQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICCSGRLEGAEIARTECGKYGK 128
Query: 173 VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
IDY A T YG G+KV++S
Sbjct: 129 TSRNVFNQKIDYAPAEVSTRYGILGVKVWISY 160
>gi|222424342|dbj|BAH20127.1| AT5G35530 [Arabidopsis thaliana]
Length = 248
Score = 95.1 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 13/186 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E L L + G + + + T II+ + R ++G+KG
Sbjct: 13 ADGVFYAEL-------NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 65
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + L +V + A A+S+ +L + RRA ++
Sbjct: 66 IGELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +VI SG+L A +++ + +G + Q + +ID G G+
Sbjct: 126 VMESGAKGCEVIVSGKLRAA-RAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQGVLGL 184
Query: 199 KVYVSL 204
KV + L
Sbjct: 185 KVKIML 190
>gi|302748697|gb|ADL63829.1| ribosomal protein S3 [Desfontainia spinosa]
Length = 479
Score = 95.1 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 45/174 (25%), Positives = 72/174 (41%), Gaps = 11/174 (6%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLS----N 93
K+ E + + G+ + I + + G KK+ N
Sbjct: 306 KVMELIDKFIDLGGIGE---WIRGIEMMIEIILRNRRIPYGYNYNSYLNEVKKMRSLLSN 362
Query: 94 MTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ---SAMRFGADGVK 150
T++ + + +A+ IAQ I+ Q R FR + V+ M+ G G++
Sbjct: 363 RTSTNTLIESVKSKSVYQSASPIAQDISFQP-RNKTFRAIFNKIVKYIPLVMKKGVGGIR 421
Query: 151 VIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
+ SGRL GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 422 ICCSGRLKGAEIARTECGKYGKTDRNVFNQKIDYAPAEVSTRYGISGVKVWISY 475
>gi|15238533|ref|NP_198403.1| 40S ribosomal protein S3 (RPS3C) [Arabidopsis thaliana]
gi|75170994|sp|Q9FJA6|RS33_ARATH RecName: Full=40S ribosomal protein S3-3
gi|9758155|dbj|BAB08712.1| 40S ribosomal protein S3 [Arabidopsis thaliana]
gi|16604318|gb|AAL24165.1| AT5g35530/MOK9_14 [Arabidopsis thaliana]
gi|20466075|gb|AAM19959.1| AT5g35530/MOK9_14 [Arabidopsis thaliana]
gi|332006595|gb|AED93978.1| 40S ribosomal protein S3-3 [Arabidopsis thaliana]
Length = 248
Score = 95.1 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 13/186 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E L L + G + + + T II+ + R ++G+KG
Sbjct: 13 ADGVFYAEL-------NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 65
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + L +V + A A+S+ +L + RRA ++
Sbjct: 66 IRELTSLVQKRFKFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +VI SG+L A +++ + +G + Q + +ID G G+
Sbjct: 126 VMESGAKGCEVIVSGKLRAA-RAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQGVLGL 184
Query: 199 KVYVSL 204
KV + L
Sbjct: 185 KVKIML 190
>gi|272716658|gb|ACZ95643.1| ribosomal protein S3 [Juniperus squamata]
Length = 633
Score = 95.1 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 9/152 (5%)
Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + + G ++ K+R LS TN+ + ++ +A+ IAQ I
Sbjct: 480 GMMIRIIPKNRKIPYGYNYYLNEVRKMRSLLSGGTNANTFIGSVKIKSVYQSASPIAQDI 539
Query: 121 AQQLE-RRVVFRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173
+ Q + FR + + V+ R G G+++ GRL GAE++RTEC G+
Sbjct: 540 SFQPRDGKRSFRSILWKIVRGISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKT 599
Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
T R IDY A T YG G+KV++
Sbjct: 600 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 631
>gi|261331251|emb|CBH14241.1| 40S ribosomal protein S3, putative [Trypanosoma brucei gambiense
DAL972]
Length = 266
Score = 95.1 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 78/183 (42%), Gaps = 6/183 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E+L+ L G A + T I++ S + ++G+KG I ++ ++ N
Sbjct: 74 EFLKRELADDGFAGVEHRVTPTRTEIVIRSTKTREVLGEKGRRIRELTACLQQRFNYKEG 133
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
++ L V ++A A+S+ +L + RRA ++ M GA G +V G++
Sbjct: 134 KLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIRYVMESGAKGCEVTIGGKI 193
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
G + +++ + +G + + +D T G+ G+ V + + + D +
Sbjct: 194 KG-QRAKSMTFRDGYMIKSGTAHKHFVDTATRHCHLRAGTIGVNVKIMRPQSMIEEDEVL 252
Query: 216 PAA 218
P
Sbjct: 253 PDV 255
>gi|78190807|gb|ABB29725.1| ribosomal protein 3 small subunit [Monosiga brevicollis]
Length = 190
Score = 95.1 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 42/184 (22%), Positives = 76/184 (41%), Gaps = 11/184 (5%)
Query: 46 HLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK---IRKKLSNMTNSEIHLS 102
L + G A + I++T K+ I++ + R ++G+KG I + +K E+ L
Sbjct: 1 ELAEDGYAGVEIKKTPKSTEIVILATRTQHVLGEKGRRIRELTAFIQKRFGFQKDEVELF 60
Query: 103 VNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAEL 162
+V + A +++ +L + RRA V+ M GA G +VI SG+L A+
Sbjct: 61 AEKVANRGLCAVAQCENLRYKLTGGLAVRRACYGVVRFVMESGAKGCEVIVSGKLR-AQR 119
Query: 163 SRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
++ + +G + R +ID G GIKV + D +
Sbjct: 120 AKAMKFGDGFMISSGNPTREYIDTAVRHVPMRQGMIGIKVKIM-----LPHDPSGKTGPK 174
Query: 221 RVVE 224
+
Sbjct: 175 APLP 178
>gi|50306913|ref|XP_453432.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642566|emb|CAH00528.1| KLLA0D08305p [Kluyveromyces lactis]
Length = 237
Score = 95.1 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 48/217 (22%), Positives = 85/217 (39%), Gaps = 21/217 (9%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ L + G + + + T II+ + + ++G+ G
Sbjct: 13 ADGVFYAEL-------NEFFTRELAEEGYSGVEVRVTPTKTEIIIRATKVQDVVGENGRR 65
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K I L V ++A A+S+ +L + RRA V+
Sbjct: 66 INELTLLIEKRFKYKRGTIALYAERVHDRGLSAVAQAESMKFKLLNGLAIRRAAYGVVRY 125
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L A +++ + +G + Q + I+ T G GI
Sbjct: 126 VMESGAKGCEVVISGKLRAA-RAKSMKFADGFLIHSGQPVNDFIETATRHVLLRQGVLGI 184
Query: 199 KVYVSL--------RDEVSDSDSTIPAAEHRVVEKDS 227
KV + + D+ + I E V + S
Sbjct: 185 KVKIMKDPSRNTSGPKALPDAVTIIEPKEEEPVLEPS 221
>gi|237837605|ref|XP_002368100.1| 40S ribosomal protein S3, putative [Toxoplasma gondii ME49]
gi|211965764|gb|EEB00960.1| 40S ribosomal protein S3, putative [Toxoplasma gondii ME49]
gi|221509134|gb|EEE34703.1| 40S ribosomal protein S3, putative [Toxoplasma gondii VEG]
Length = 235
Score = 95.1 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 41/207 (19%), Positives = 82/207 (39%), Gaps = 22/207 (10%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L C L + G + + + T II+ + R ++G KG I ++ +
Sbjct: 25 EFLSCTLSEDGYSGVEVRVTPIRTEIIIRATRTREVLGDKGRRIRELTSVVQKRFGFAPD 84
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L V + A A+S+ +L + + RRA ++ M GA G +V+ SG+L
Sbjct: 85 SVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGVLRHIMESGAKGCEVVVSGKL 144
Query: 158 NGAELSRTECYLEGR--VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD--------- 206
A+ +++ + +G + + +D + G G++V + L
Sbjct: 145 R-AQRAKSMKFKDGYLISTGEPSKMFVDQAIRSVQLRQGVLGVRVKIMLPHDPEGKRGPA 203
Query: 207 -------EVSDSDSTIPAAEHRVVEKD 226
V D IP + +++
Sbjct: 204 NPLPDTIIVMDPKPEIPVVQPEEMDEG 230
>gi|50553820|ref|XP_504321.1| YALI0E23694p [Yarrowia lipolytica]
gi|49650190|emb|CAG79920.1| YALI0E23694p [Yarrowia lipolytica]
Length = 246
Score = 95.1 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 43/200 (21%), Positives = 82/200 (41%), Gaps = 14/200 (7%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ L + G + + + T I+V + ++G+ G
Sbjct: 15 ADGVFYAEL-------NEFFTRELAEEGYSGVEVRLTPTKTEIVVRATHTNKVLGENGRR 67
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + + V + ++A +S+ +L + RRA V+
Sbjct: 68 IRELMSLVQKRFRLPEGSVTIYAERVQERGLSAVAQCESVKYKLLNGLAIRRAAYGVVRY 127
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA GV+V+ SG+L A +++ + +G + Q + ID T G G+
Sbjct: 128 VMDAGAKGVEVVVSGKLRAA-RAKSMKFADGFMIHSGQPVNDFIDTATRHVLLRQGVLGV 186
Query: 199 KVYVSLRDEVSDSDSTIPAA 218
KV + D + +P +
Sbjct: 187 KVKIMR-DPATSKKPGVPKS 205
>gi|44500|emb|CAA47894.1| 30 S ribosomal protein S3 [Mycoplasma pneumoniae]
Length = 106
Score = 95.1 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 38/103 (36%), Positives = 63/103 (61%), Gaps = 4/103 (3%)
Query: 129 VFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAV 188
R AM++++ ++ GA+G+KV+ SGRLNGAE++R + Y+EG +PL TLRA IDY
Sbjct: 2 PLRTAMRQSLIKVLKAGANGIKVLVSGRLNGAEIARDKMYIEGNMPLSTLRADIDYALEK 61
Query: 189 AETAYGSCGIKVYVSLRDEVSDSDSTIPA----AEHRVVEKDS 227
A+T YG G+KV+++ + + PA + + + +
Sbjct: 62 AQTTYGVIGVKVWINRGMIYTKGLNRTPAHILHPQKKQPNRQN 104
>gi|85014361|ref|XP_955676.1| 40S ribosomal protein S3 [Encephalitozoon cuniculi GB-M1]
gi|51701889|sp|Q8SQM3|RS3_ENCCU RecName: Full=40S ribosomal protein S3
gi|19171370|emb|CAD27095.1| 40S RIBOSOMAL PROTEIN S3 [Encephalitozoon cuniculi GB-M1]
Length = 228
Score = 95.1 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 42/173 (24%), Positives = 86/173 (49%), Gaps = 8/173 (4%)
Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMT 95
++E+ + L G + + + +II+ A+P IG+K + + + + +
Sbjct: 32 LKEFFEKALVNEGFSTMELRMQETPIKIILKVAKPHEAIGEKKFRLRQFQHLAAQRLEVP 91
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155
+ + + V +V + + A + A I +++ V +RRA+ A+++A A G ++I SG
Sbjct: 92 DESVEIVVEKVHEKGLCALIQANFIREKILGGVQYRRAVNMALKTARHAKAQGCQIIVSG 151
Query: 156 RLNGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLR 205
+L G + +++ + +G V + + A DY G A ET G GI+V + L
Sbjct: 152 KLKG-QRAKSVKFQDG-VLIHSGDAVKDYINTGYATVETKQGVIGIQVRIMLP 202
>gi|152060898|sp|A3MTL3|RS3_PYRCJ RecName: Full=30S ribosomal protein S3P
Length = 216
Score = 95.1 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 15/204 (7%)
Query: 29 YGALLHEDLK---IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIE 85
Y +L E+ K I+E+L+ L + G I +T RI++Y+ RP IIG+KG ++
Sbjct: 11 YKKILEENKKKWMIKEFLEYRLAKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVK 70
Query: 86 KIRKKLSNMTNSEI----HLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSA 141
++ L+N E + V+++ PE+ ++A IA + R V FRR M AV+
Sbjct: 71 EVSSILANKLGVENPQIDVIDVSKIEAPELFPKVVAYRIANAMARGVRFRRVMFVAVRQL 130
Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIK 199
M GA G +++ SG+L+ E ++ E G++ A + G GI+
Sbjct: 131 MEAGAKGFEIVVSGKLS-TERAKFEKITYGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIE 189
Query: 200 VYV-----SLRDEVSDSDSTIPAA 218
V + DE T P A
Sbjct: 190 VRITPATLRYSDEYKIKPPTRPEA 213
>gi|1351019|sp|P49386|RT03_BRANA RecName: Full=Ribosomal protein S3, mitochondrial
Length = 555
Score = 95.1 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 45/184 (24%), Positives = 86/184 (46%), Gaps = 7/184 (3%)
Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIR 88
LL +D K+ E ++ G+ ++ + I + + G+ G +++K+R
Sbjct: 368 NLLGKD-KVMELIEKFKDLGGIEEL---IKVIDMMIEIILRKRGIPYGYNSYFNEVQKMR 423
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADG 148
LSN TN++ + ++ +A+LIAQ I+ QL+ + ++ + + +G
Sbjct: 424 SFLSNRTNTKTLIESVKIKSVYQSASLIAQDISFQLKNKRRSTHSIFAKIVKEIPKRVEG 483
Query: 149 VKVIASGRLN-GAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
+++ SGRL AE ++T+CY + IDY A T YG G+KV++S +
Sbjct: 484 IRICFSGRLKDAAEKAQTKCYKHRKTSRNVFNQKIDYAPAEVSTRYGISGVKVWISYSQK 543
Query: 208 VSDS 211
Sbjct: 544 KGGR 547
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 39/101 (38%), Gaps = 9/101 (8%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54
M +K NPI RLG N + +S F+ YG +++D+ +R Y + +
Sbjct: 1 MARKGNPISVRLGKNRSSDSSRFSEYY-YGKFVYQDVNLRSYFGSIRPPTRLTFGFRLGR 59
Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT 95
++ K R ++ P K + + K+
Sbjct: 60 CILLHFPK--RTFIHFFLPRRPRRLKRREKTRPGKEKGRWW 98
>gi|291334068|gb|ADD93741.1| hypothetical protein [uncultured marine bacterium
MedDCM-OCT-S05-C114]
Length = 68
Score = 95.1 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 33/64 (51%), Positives = 46/64 (71%)
Query: 144 FGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
GA+G+++ +GRL GA+++RTE EGRVPL TLR +IDYG A T YG GIK ++
Sbjct: 1 MGAEGIRIQCAGRLAGADIARTEQLREGRVPLHTLRENIDYGLVEANTVYGIIGIKCWIC 60
Query: 204 LRDE 207
L++E
Sbjct: 61 LKEE 64
>gi|254564691|ref|XP_002489456.1| Protein component of the small (40S) ribosomal subunit [Pichia
pastoris GS115]
gi|238029252|emb|CAY67175.1| Protein component of the small (40S) ribosomal subunit [Pichia
pastoris GS115]
gi|328349885|emb|CCA36285.1| 40S ribosomal protein S3 [Pichia pastoris CBS 7435]
Length = 243
Score = 95.1 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 78/186 (41%), Gaps = 13/186 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L EY L + G + + + T II+ + + ++G+ G
Sbjct: 14 ADGVFYAEL-------NEYFTRELAEDGYSGVEVRVTPTTTEIIIRATQTNSVLGENGRR 66
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + ++ L V ++A +S+ +L + RRA V+
Sbjct: 67 IRELTALVQKRFKIDEGKVILYAERVQDRGLSAVTQCESLRYKLLNGLAIRRAAYGVVRF 126
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA GV+V+ SG+L A +++ + +G + Q + I+ T G GI
Sbjct: 127 VMDSGAKGVEVVVSGKLRAA-RAKSMKFADGFMIHSGQPAKDFIETATRHVLLRQGVLGI 185
Query: 199 KVYVSL 204
KV +
Sbjct: 186 KVKIMR 191
>gi|302748591|gb|ADL63776.1| ribosomal protein S3 [Brexia madagascariensis]
Length = 480
Score = 95.1 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 9/169 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ I + + + G +++K+R LSN T
Sbjct: 315 KVMELIEKFINLGGIGEL---IKGIEMMIEIILRKRKIPYGYNFYLNEVKKMRSLLSNRT 371
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ +L +R FR + V+ M+ G +G+++
Sbjct: 372 NTNTLIESVKIKSVYQSASPIAQDISLKLRNKRRSFRSIFSKIVKDIPLVMKKGVEGIRI 431
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200
SGR GAE++RTEC G+ IDY A T YG G+KV
Sbjct: 432 CCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGXSGVKV 480
>gi|272716630|gb|ACZ95622.1| ribosomal protein S3 [Thujopsis dolabrata]
Length = 613
Score = 95.1 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 9/152 (5%)
Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + + G ++ K+R LS TN+ + ++ +A+ IAQ I
Sbjct: 460 GMMIRIIPKNRRIPYGYNYYLNEVRKMRSLLSGGTNANTFIGSVKIKSVYQSASPIAQDI 519
Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173
+ Q FR + + V+ R G G+++ GRL GAE++RTEC G+
Sbjct: 520 SFQPRDGTRSFRSILWKIVRDISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKT 579
Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
T R IDY A T YG G+KV++
Sbjct: 580 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 611
>gi|118793920|ref|XP_321155.3| AGAP001910-PA [Anopheles gambiae str. PEST]
gi|116116043|gb|EAA01737.4| AGAP001910-PA [Anopheles gambiae str. PEST]
Length = 244
Score = 95.1 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 39/183 (21%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRELTAVVRKRFGFAPG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + ++D T G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKVKIMLPWDPNGKIGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|163658467|gb|ABY28373.1| ribosomal protein S3 [Oncorhynchus masou formosanus]
Length = 245
Score = 95.1 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVGVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M G+ G +V+ SG+L
Sbjct: 83 NVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGSKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ ++G + + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSMKSVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201
Query: 212 DST 214
+
Sbjct: 202 EPL 204
>gi|4106851|gb|AAD03044.1| ribosomal protein S3 [Solanum tuberosum]
Length = 151
Score = 95.1 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 41/134 (30%), Positives = 67/134 (50%), Gaps = 4/134 (2%)
Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS 140
+++K+R L N TN+ + ++ +A+ IAQ I+ Q + FR + V+
Sbjct: 10 NEVQKMRSLLYNRTNTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKD 69
Query: 141 A---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197
M+ G +G+++ SGRL GAE++RTEC G+ IDY A T YG G
Sbjct: 70 IPLVMKKGVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISG 129
Query: 198 IKVYVSLRDEVSDS 211
+KV++S +
Sbjct: 130 VKVWISYSKKKGGR 143
>gi|320163406|gb|EFW40305.1| ribosomal protein S3 [Capsaspora owczarzaki ATCC 30864]
Length = 252
Score = 95.1 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 74/169 (43%), Gaps = 6/169 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ + +
Sbjct: 24 EFLTRELAEEGYSGVEVRVTPTRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFGFPEN 83
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA GV+V+ SG+L
Sbjct: 84 SVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGVEVVVSGKL 143
Query: 158 NGAELSRTECYLEGRVPLQTLR--AHIDYGTAVAETAYGSCGIKVYVSL 204
G + ++ + +G + +ID G G+KV + L
Sbjct: 144 RG-QRAKAMKFQDGFMVHSGFPTTYYIDRAVRHVLLRQGVLGLKVKIML 191
>gi|73987948|ref|XP_860487.1| PREDICTED: similar to 40S ribosomal protein S3 isoform 9 [Canis
familiaris]
Length = 195
Score = 95.1 bits (235), Expect = 7e-18, Method: Composition-based stats.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 6/170 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
G + +++ +++G + + ++D G GIKV + L
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLP 191
>gi|198434172|ref|XP_002129244.1| PREDICTED: similar to putative 40S ribosomal protein RPS3 [Ciona
intestinalis]
Length = 260
Score = 95.1 bits (235), Expect = 8e-18, Method: Composition-based stats.
Identities = 43/201 (21%), Positives = 83/201 (41%), Gaps = 16/201 (7%)
Query: 23 FARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT 82
F + A L+E L L + G + + + T II+ + R ++G+KG
Sbjct: 11 FVNDGLFKAELNE------LLWRELAEDGYSGVEVRVTPSRTEIIILATRTQNVLGEKGR 64
Query: 83 DIEK---IRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
I + + +K + + L +V + AT +S+ +L + RRA ++
Sbjct: 65 RIRELTAMVQKRFKFKDDGVELYAEKVANRGLCATAQCESLRYKLLGGLAVRRACYGVLR 124
Query: 140 SAMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCG 197
M GA G +V+ SG+L G + ++ +++G + +R ++D G G
Sbjct: 125 FIMESGAKGCEVVVSGKLRG-QRAKAMKFVDGLMIHSGDPVREYVDTAVRHVLLRQGVLG 183
Query: 198 IKVYVSLR----DEVSDSDST 214
IKV + L ++
Sbjct: 184 IKVKIMLPWDPQGKIGPKKPL 204
>gi|272716578|gb|ACZ95583.1| ribosomal protein S3 [Sequoiadendron giganteum]
Length = 599
Score = 94.7 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 67/152 (44%), Gaps = 9/152 (5%)
Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + + G ++ K+R LS TN+ + ++ +A+ IAQ I
Sbjct: 446 GMMIRIIPKNRRIPYGYNYYLNEVRKMRSLLSGGTNANTFIGSVKIKSVYQSASPIAQDI 505
Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173
+ Q FR + + V+ R G G+++ GRL GAE++RTEC G+
Sbjct: 506 SFQPRDGTRSFRSILWKIVRDISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKT 565
Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
T R IDY A T YG G+KV++
Sbjct: 566 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 597
>gi|68070737|ref|XP_677280.1| ribosomal protein S3 [Plasmodium berghei strain ANKA]
gi|56497334|emb|CAH98166.1| ribosomal protein S3, putative [Plasmodium berghei]
Length = 218
Score = 94.7 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 41/171 (23%), Positives = 79/171 (46%), Gaps = 7/171 (4%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK----IRKKLSNMTN 96
E+L L + G + + + T +I+ + R ++G KG I + ++K+ N
Sbjct: 19 EFLARILAEDGYSGVEVRVTPIRTEVIIRATRTREVLGDKGRRIRELTSLVQKRFFNKLT 78
Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156
+ + L V + A A+S+ +L + + RRA ++ M GA G +VI SG+
Sbjct: 79 NSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGVLRHIMESGAKGCEVIVSGK 138
Query: 157 LNGAELSRTECYLEGR--VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
L A+ +++ + +G + + ++ T A+ G GIKV + L
Sbjct: 139 LR-AQRAKSMKFRDGYLISTGEPSKRFVNTATRSAQLKQGVLGIKVKIMLP 188
>gi|272716571|gb|ACZ95578.1| ribosomal protein S3 [Agathis dammara]
Length = 718
Score = 94.7 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 5/129 (3%)
Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLER--RVVFRRAMKRAVQ 139
++ K+R LS+ TN+ + ++ +A+LIAQ + L + FR + V+
Sbjct: 590 NEVRKMRSLLSDRTNTNTFIGPVKIKSVFQSASLIAQDTSLLLRSNIKRSFRSIFNQIVK 649
Query: 140 SAMRFGAD---GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196
+ G+++ SGRL GA+++RTE + IDY A T YG
Sbjct: 650 GIPKVTRKRVRGIRIRCSGRLKGAKIARTEHRKYRKPSCNAFGHKIDYAYAKVSTRYGIL 709
Query: 197 GIKVYVSLR 205
G+KV++S R
Sbjct: 710 GVKVWISFR 718
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 9/79 (11%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54
M +K NPI RL N + +S WF+ YG L+++D+ R+Y + +
Sbjct: 1 MARKANPISVRLHPNRSSDSNWFSDHY-YGKLVYQDVNSRDYFGSIRPPTRKTFGFRLGR 59
Query: 55 ILIERTHKNCRIIVYSARP 73
+ + K R ++ P
Sbjct: 60 CIPHHSPK--RTFIHLFFP 76
>gi|302748747|gb|ADL63854.1| ribosomal protein S3 [Galbulimima belgraveana]
Length = 446
Score = 94.7 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 46/170 (27%), Positives = 80/170 (47%), Gaps = 5/170 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E + + + ++ I+ II+ + R +++KIR LSN TN+
Sbjct: 278 KVMELIDKFIDLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVQKIRSFLSNRTNT 336
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + + ++ M G +G+++
Sbjct: 337 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSILSQIVKDMKLVMPKGVEGIRICC 396
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR GAE++RT+C G+ IDY A T YG G+KV +S
Sbjct: 397 SGRSEGAEIARTKCGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 446
>gi|110456370|gb|ABG74703.1| putative ribosomal protein S3 [Diaphorina citri]
Length = 220
Score = 94.7 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 77/171 (45%), Gaps = 8/171 (4%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E+L L + G + + I T II+ + R ++G KG I ++ +K +
Sbjct: 2 EFLTRELAEDGYSGVEIRFTPARTEIIIMATRTQNVLGDKGRRIRELTSVVQKRFKFADG 61
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
I L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 62 AIELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 121
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLR 205
G + +++ +++G + + + DY T G GIKV + L
Sbjct: 122 RG-QRAKSMKFVDGLM-IHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLP 170
>gi|297816692|ref|XP_002876229.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
gi|297322067|gb|EFH52488.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
Length = 249
Score = 94.7 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 47/186 (25%), Positives = 78/186 (41%), Gaps = 13/186 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E L L + G + + + T II+ + R ++G+KG
Sbjct: 13 ADGVFYAEL-------NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 65
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + L +V + A A+S+ +L + RRA ++
Sbjct: 66 IRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +VI SG+L A +++ + +G + Q + +ID G GI
Sbjct: 126 VMESGAKGCEVIVSGKLRAA-RAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQGVLGI 184
Query: 199 KVYVSL 204
KV V L
Sbjct: 185 KVKVML 190
>gi|192910782|gb|ACF06499.1| ribosomal protein [Elaeis guineensis]
Length = 235
Score = 94.7 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 46/186 (24%), Positives = 82/186 (44%), Gaps = 13/186 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E L L + G + + + T II+ + R ++G+KG
Sbjct: 13 ADGVFYAEL-------NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 65
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + + L +V + A A+S+ +L + RRA ++
Sbjct: 66 IRELTSVVQKRFSFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRVPL--QTLRAHIDYGTAVAETAYGSCGI 198
M GA G +VI SG+L A+ +++ + +G + Q ++ +ID G GI
Sbjct: 126 VMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMISCGQPVKEYIDSAVRHVLLRQGVLGI 184
Query: 199 KVYVSL 204
KV + L
Sbjct: 185 KVKIML 190
>gi|302749077|gb|ADL64018.1| ribosomal protein S3 [Terminalia catappa]
Length = 444
Score = 94.7 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 79/167 (47%), Gaps = 5/167 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
+ E ++ + +G+ ++ I+ II+ + + +++K+R LSN T +
Sbjct: 279 MVMELIEKFIDLSGIGEL-IKGIEMMIEIILRNIKIPYGYNSYLNEVKKMRSFLSNRTKT 337
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + + + M+ G +G+++
Sbjct: 338 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIYSQIVKYIPLVMKKGVEGIRICC 397
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200
SGR GAE++RTEC G+ IDY A T YG G+KV
Sbjct: 398 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKV 444
>gi|225715464|gb|ACO13578.1| 40S ribosomal protein S3 [Esox lucius]
Length = 247
Score = 94.7 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 76/183 (41%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V A A+S+ +L + RRA ++ M G+ G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGPCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGSKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|50344456|emb|CAH04314.1| S3e ribosomal protein [Carabus granulatus]
Length = 239
Score = 94.7 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 82/195 (42%), Gaps = 10/195 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E+L L + G + + + T II+ + R ++G+KG I ++ +K +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRELTSVVQKRFSFPEH 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + ++D T G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQGVLGIKVKIMLPWDPNGKIGPK 201
Query: 212 DSTIPAAEHRVVEKD 226
+++
Sbjct: 202 RPLPDNVSVVEPKEE 216
>gi|12847921|dbj|BAB27761.1| unnamed protein product [Mus musculus]
Length = 243
Score = 94.7 bits (234), Expect = 9e-18, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 76/183 (41%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EILTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|272716594|gb|ACZ95595.1| ribosomal protein S3 [Cupressus funebris]
Length = 633
Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 9/152 (5%)
Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + + G ++ K+R LS TN+ + ++ +A+ IAQ I
Sbjct: 480 GMMIRIIPKNRKIPYGYNYYLNEVRKMRSLLSGGTNANTFIGSVKIKSVYQSASPIAQDI 539
Query: 121 AQQLE-RRVVFRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173
+ Q + FR + + V+ R G G+++ GRL GAE++RTEC G+
Sbjct: 540 SFQPRDGKRSFRSILWKIVRGISLVMPKLRKGVGGIRICRPGRLKGAEIARTECREYGKT 599
Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
T R IDY A T YG G+KV++
Sbjct: 600 SCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 631
>gi|302748745|gb|ADL63853.1| ribosomal protein S3 [Galax urceolata]
Length = 477
Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 7/167 (4%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ + ++ + + ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 313 KVMKLIEKFIDLGEIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 371
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLER-----RVVFRRAMKRAVQSAMRFGADGVKVI 152
+ ++ +A++IAQ I+ QL R F + +K + M+ G +G+++
Sbjct: 372 NTLIESVKIKSVYQSASMIAQDISFQLRNKTRSFRSFFSKIVKD-IPLVMKKGVEGIRIC 430
Query: 153 ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIK 199
SGR GAE++RTEC G+ IDY A T YG G+K
Sbjct: 431 CSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVK 477
>gi|295154458|gb|ADF83138.1| ribosomal protein S3 [Psammagrostis wiseana]
Length = 148
Score = 94.7 bits (234), Expect = 1e-17, Method: Composition-based stats.
Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 17/148 (11%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAG----------------VAKILIERTH 61
+S WFA+ Y L ED KIR ++ ++++ + I I++
Sbjct: 1 HHSFWFAQPKNYSEGLQEDKKIRNCIKNYIQKNRKKSSNRKIESDSSSEVITHIEIQKEI 60
Query: 62 KNCRIIVYSARPGLIIGKKG-TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
+I++ P L+ K ++EK +K N N +++++ +V +P ++A+ I
Sbjct: 61 DTIHVIIHIGFPNLLKKKGAIEELEKDIQKEVNSVNQRLNIAIEKVKEPYRQPNILAEYI 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADG 148
A QL+ RV FR+AMK+A++ + G
Sbjct: 121 AFQLKNRVSFRKAMKKAIELTKKADIKG 148
>gi|148684442|gb|EDL16389.1| ribosomal protein S3, isoform CRA_d [Mus musculus]
Length = 251
Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|302748786|gb|ADL63873.1| ribosomal protein S3 [Hibbertia cuneiformis]
Length = 477
Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 6/174 (3%)
Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90
L+ +D I E+++ + G+ ++ I+ II+ + R +++K+R
Sbjct: 306 NLMDKDKVI-EWIKKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSL 363
Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGA 146
LSN TN+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G
Sbjct: 364 LSNRTNTNTLIESAKIKSVYQSASPIAQDISFQPRNKTRSFRSIFTKIVKDIPLVMKKGV 423
Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200
G+++ SGRL GAE++RTEC G+ IDY A T YG G+KV
Sbjct: 424 GGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKV 477
>gi|302749069|gb|ADL64014.1| ribosomal protein S3 [Syringa sp. Qiu 95037]
Length = 472
Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 46/166 (27%), Positives = 78/166 (46%), Gaps = 5/166 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E + + + ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 308 KVMELIDKFIDLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 366
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 367 NTLIESVKIKSVYQSASPIAQDISFQLRTKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 426
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIK 199
SGR GAE++RTEC G+ IDY A T YG G+K
Sbjct: 427 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVK 472
>gi|2500399|sp|P79891|RS3_AMBME RecName: Full=40S ribosomal protein S3
gi|1836060|gb|AAB46849.1| ribosomal protein S3 [Ambystoma mexicanum]
Length = 253
Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M G+ G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGSKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL----RDEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLAWDPSGKIGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|297805098|ref|XP_002870433.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
gi|297316269|gb|EFH46692.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
Length = 248
Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 13/186 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E L L + G + + + T II+ + R ++G+KG
Sbjct: 13 ADGVFYAEL-------NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 65
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + L +V + A A+S+ +L + RRA ++
Sbjct: 66 IRELTSLVQKRFRFPQDSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +VI SG+L A +++ + +G + Q + +ID G G+
Sbjct: 126 VMESGAKGCEVIVSGKLRAA-RAKSMKFKDGYMVSSGQPTKEYIDAAVRHVLLRQGVLGL 184
Query: 199 KVYVSL 204
KV + L
Sbjct: 185 KVKIML 190
>gi|218458652|ref|ZP_03498743.1| 30S ribosomal protein S3 [Rhizobium etli Kim 5]
Length = 79
Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 35/62 (56%), Positives = 44/62 (70%), Gaps = 3/62 (4%)
Query: 166 ECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEK 225
E Y EGRVPL TLRA IDYGTA AETA+G CGIKV++ + E+ + D A+E R +E
Sbjct: 1 EWYREGRVPLHTLRADIDYGTAEAETAFGICGIKVWIF-KGEILEHDPM--ASERRALEG 57
Query: 226 DS 227
D+
Sbjct: 58 DA 59
>gi|223999667|ref|XP_002289506.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974714|gb|EED93043.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 270
Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 47/217 (21%), Positives = 80/217 (36%), Gaps = 22/217 (10%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E L L + G A + + T II+ + + ++G+KG
Sbjct: 17 ADGVFYAEL-------NELLTRELAEDGYAGVEVRTTPHRTEIIIRATKTQNVLGEKGQR 69
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L V + A A+S+ +L + RRA V+
Sbjct: 70 IRELTSVVQKRFDFAEGAVELYAERVQNRGLCAQAQAESLKFKLLAGLAVRRACYGVVRF 129
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M A G +VI SG+L G + ++ + +G + + + D G GI
Sbjct: 130 VMEASAKGCEVIVSGKLRG-QRAKGMKFGDGYMIKTGHAGQVYTDVAVRHVLMRQGVIGI 188
Query: 199 KVYVSL---------RDEVSDSDSTIPAAEHRVVEKD 226
KV + L D TI + +
Sbjct: 189 KVAIMLPHDPKGVQGPKIPLDDVVTILEPKEEPSPES 225
>gi|72058324|ref|XP_798304.1| PREDICTED: similar to ribosomal protein S3 [Strongylocentrotus
purpuratus]
gi|115649138|ref|XP_001204398.1| PREDICTED: similar to ribosomal protein S3 [Strongylocentrotus
purpuratus]
Length = 279
Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 39/196 (19%), Positives = 82/196 (41%), Gaps = 11/196 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ + N +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQSVLGEKGRRIRELTAVVQKRFNFAEN 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A +S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 TVELYAEKVATRGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
G + +++ +++G + ++ ++D G GIKV + +V+
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGAPVKDYVDVAIRHVMLRQGVLGIKVKIMRPFDVTGKTGPK 201
Query: 216 PAAEH-----RVVEKD 226
E++
Sbjct: 202 KPLPDVISISEPKEEE 217
>gi|302749005|gb|ADL63982.1| ribosomal protein S3 [Saintpaulia magungensis]
Length = 469
Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 81/166 (48%), Gaps = 5/166 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 305 KVMELIEKFIDLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 363
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + + +++ M+ G +G+++
Sbjct: 364 NTLIESVKIKSVYQSASPIAQDISFQLRTKTRSFRSILTKILKNIPLVMKKGVEGIRICC 423
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIK 199
SGR GAE++RTEC G+ IDY A T YG G+K
Sbjct: 424 SGRSEGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYGILGVK 469
>gi|290977385|ref|XP_002671418.1| predicted protein [Naegleria gruberi]
gi|284084987|gb|EFC38674.1| predicted protein [Naegleria gruberi]
Length = 228
Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 44/185 (23%), Positives = 81/185 (43%), Gaps = 6/185 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L+ L + G + + + T II+ + RP ++G G ++++ +
Sbjct: 25 EFLKRELAEDGYSGVEVRATVARTEIIIRATRPQTVVGDNGRRMKELTSVIQKRFGFEEG 84
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+I L V ++A A+S+ Q+L V R+A ++ M GA G VI SG+L
Sbjct: 85 KIELYAENVKNKGLSAIAQAESLKQKLMEGVAVRKACYGVLRFVMDSGAKGGAVIVSGKL 144
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
A+ +++ + EG + Q ++ ++D G GIKV V L V +
Sbjct: 145 R-AQRAKSMKFAEGYMIRTGQPVKDYVDIAVRHVYMKQGVLGIKVKVMLPWVVGTQAGSN 203
Query: 216 PAAEH 220
+
Sbjct: 204 QKPQP 208
>gi|302748703|gb|ADL63832.1| ribosomal protein S3 [Dillenia indica]
Length = 477
Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 50/174 (28%), Positives = 83/174 (47%), Gaps = 6/174 (3%)
Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90
L+ +D I E ++ + G+ ++ I+ II+ + R +++K+R
Sbjct: 306 NLMDKDKVI-ELIKKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSL 363
Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGA 146
LSN TN+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G
Sbjct: 364 LSNRTNTNTLIESAKIKSVYQSASPIAQDISFQPRNKTRSFRSIFTKIVKDIPLVMKKGV 423
Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200
G+++ SGRL GAE++RTEC G+ IDY A T YG G+KV
Sbjct: 424 GGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVKV 477
>gi|302748977|gb|ADL63968.1| ribosomal protein S3 [Potamogeton berchtoldii]
Length = 450
Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 5/170 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ ++ G LI+ II+ + +++K+R LS T +
Sbjct: 282 KVMELIEK-CRELGSTGELIKGMEMMIEIILRNRGIPYGYNSYLNEVQKMRSFLSERTKT 340
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSAMRFGADG---VKVIA 153
E + ++ +A+ IAQ I+ Q +R FR V+ G +++
Sbjct: 341 ETSIESVKIQSVYQSASPIAQDISFQSRNKRRSFRSIFSNIVKDIPSKRTKGVEGIRLCC 400
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGR +GAE++RTEC G+ IDY A T YG G+KV++S
Sbjct: 401 SGRSSGAEIARTECGKYGKTSCNVFNQKIDYAPAEVSTRYGISGVKVWIS 450
>gi|27734520|sp|Q8ZWI0|RS3_PYRAE RecName: Full=30S ribosomal protein S3P
Length = 218
Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 11/209 (5%)
Query: 29 YGALLHEDLK---IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKG---T 82
Y +L E+ K I+E+L+ L + G I +T RI++Y+ RP IIG+KG
Sbjct: 11 YKKILEENKKKWMIKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVK 70
Query: 83 DIEKIRKKLSNMTNSEIH-LSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSA 141
+I I + N +I + ++++ PE+ ++A IA + + V FRR M A++
Sbjct: 71 EISNILTTKLGVENPQIDVIDISKIEAPEMFPKVVAYRIANAMAKGVRFRRVMFVAIRQL 130
Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIK 199
M GA G +++ SG+L+ E +R E G++ A + G GI+
Sbjct: 131 MEAGAKGFEIVVSGKLS-TERARFEKQTYGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIE 189
Query: 200 VYVSLRDEVSDSD-STIPAAEHRVVEKDS 227
V ++ + P V++ S
Sbjct: 190 VRIAPATLQYSDEYKIKPPVRPEAVQQQS 218
>gi|16566719|gb|AAL26578.1|AF429976_1 ribosomal protein S3 [Spodoptera frugiperda]
Length = 243
Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 8/171 (4%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E+L L + G + + + T II+ + R ++G+KG I ++ +K N+
Sbjct: 24 EFLTRELAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPER 83
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 84 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 143
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLR 205
G + +++ +++G + + + DY T G GIKV + L
Sbjct: 144 RG-QRAKSMKFVDGLM-IHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLP 192
>gi|307594499|ref|YP_003900816.1| 30S ribosomal protein S3 [Vulcanisaeta distributa DSM 14429]
gi|307549700|gb|ADN49765.1| ribosomal protein S3 [Vulcanisaeta distributa DSM 14429]
Length = 228
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 91/197 (46%), Gaps = 7/197 (3%)
Query: 29 YGALLHEDLK---IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIE 85
Y +L + +K I+E+L L + G + +T RIIVY+ RP IIG+KG ++
Sbjct: 11 YKKILQDKIKEWMIKEFLNYRLAKQGYVDSDVLKTPLGTRIIVYAERPNRIIGRKGVIVK 70
Query: 86 KIRKK-LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRF 144
++ + + + V + PE+N +IA IA + + V FRRA A++ M
Sbjct: 71 ELTELLSKKLEVENPIIDVTPIQNPELNPKIIANRIAWAMTKGVKFRRAGMIAIRQIMDG 130
Query: 145 GADGVKVIASGRLNGAELSRTECYLEGRVPLQTL--RAHIDYGTAVAETAYGSCGIKVYV 202
GA G +V SG+L +E SR E Y+ G + R + G GI+V +
Sbjct: 131 GAKGAEVTISGKLT-SERSRFEKYIYGTIYKNGFDSRTKVQRFVGQVLLKPGLYGIEVRI 189
Query: 203 SLRDEVSDSDSTIPAAE 219
+ SD P +
Sbjct: 190 TPPIRFSDEFQIKPPSR 206
>gi|15232352|ref|NP_190955.1| 40S ribosomal protein S3 (RPS3B) [Arabidopsis thaliana]
gi|75183568|sp|Q9M339|RS32_ARATH RecName: Full=40S ribosomal protein S3-2
gi|16226458|gb|AAL16173.1|AF428405_1 AT3g53870/F5K20_170 [Arabidopsis thaliana]
gi|7630007|emb|CAB88349.1| ribosomal protein S3a homolog [Arabidopsis thaliana]
gi|14334698|gb|AAK59527.1| putative ribosomal protein S3a homolog [Arabidopsis thaliana]
gi|16323404|gb|AAL15196.1| putative ribosomal protein S3a homolog [Arabidopsis thaliana]
gi|21618068|gb|AAM67118.1| ribosomal protein S3a-like protein [Arabidopsis thaliana]
Length = 249
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 47/186 (25%), Positives = 78/186 (41%), Gaps = 13/186 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E L L + G + + + T II+ + R ++G+KG
Sbjct: 13 ADGVFYAEL-------NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 65
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + L +V + A A+S+ +L + RRA ++
Sbjct: 66 IRELTSLVQKRFKFPVDSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +VI SG+L A +++ + +G + Q + +ID G GI
Sbjct: 126 VMESGAKGCEVIVSGKLRAA-RAKSMKFKDGYMVSSGQPTKEYIDSAVRHVLLRQGVLGI 184
Query: 199 KVYVSL 204
KV V L
Sbjct: 185 KVKVML 190
>gi|253746539|gb|EET01746.1| Ribosomal protein S3 [Giardia intestinalis ATCC 50581]
Length = 217
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 45/205 (21%), Positives = 89/205 (43%), Gaps = 13/205 (6%)
Query: 29 YGALLHE---DLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIE 85
Y L++ + ++ E+ L AG A + RT + +I+ A P +++G +
Sbjct: 14 YAKYLNDCIMEAELHEFFSRELVDAGYASCSLCRTADSICVIIQCAEPEIVMGDNHYRLH 73
Query: 86 KIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAM 142
KI ++ V+++ K ++A ++ ++ +LE + RRA +++AM
Sbjct: 74 KIEYLLAGRFMCDPKNFNIWVDKIIKRGLSAEIMVDNLRAKLEEAMPIRRAAYSVIRTAM 133
Query: 143 RFGADGVKVIASGRLNGAELSRTECYLEGR--VPLQTLRAHIDYGTAVAETAYGSCGIKV 200
R GA G +VI +G+L A+ +R + EG R + T + G G+KV
Sbjct: 134 RAGAAGCEVIVAGKLR-AQRARANKFKEGCLISTGHPKRIFLAEATRHIKMRQGVIGVKV 192
Query: 201 YVS----LRDEVSDSDSTIPAAEHR 221
+ + D P + ++
Sbjct: 193 RIYNPNIRGAVMPDKIEIGPFSRNK 217
>gi|254684380|ref|ZP_05148240.1| 30S ribosomal protein S3 [Bacillus anthracis str. CNEVA-9066]
Length = 60
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 34/61 (55%), Positives = 41/61 (67%), Gaps = 1/61 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+NPI R+GV W SRWFA +Y LLHED+KIREY+ LK + AK+ IER
Sbjct: 1 MGQKVNPIGLRVGVIRDWESRWFAE-KDYATLLHEDIKIREYINVRLKDSAGAKVEIERA 59
Query: 61 H 61
Sbjct: 60 A 60
>gi|124810210|ref|XP_001348801.1| 40S ribosomal protein S3, putative [Plasmodium falciparum 3D7]
gi|23497701|gb|AAN37240.1| 40S ribosomal protein S3, putative [Plasmodium falciparum 3D7]
Length = 221
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 7/171 (4%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK----IRKKLSNMTN 96
E+L L + G + + + T +I+ + R ++G KG I + ++K+ N +
Sbjct: 23 EFLARILAEDGYSGVEVRVTPIRTEVIIRATRTREVLGDKGRRIRELTSLVQKRFFNKST 82
Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156
+ + L V + A A+S+ +L + + RRA ++ M GA G +VI SG+
Sbjct: 83 NSVELFAERVEHRGLCAMAQAESLRYKLLKGLAVRRACYGVLRHIMESGAKGCEVIVSGK 142
Query: 157 LNGAELSRTECYLEGR--VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
L A+ +++ + +G + + ++ T A+ G GIKV + L
Sbjct: 143 LR-AQRAKSMKFRDGYLISTGEPSKRFVNTATRSAQLKQGVLGIKVKIMLP 192
>gi|302748969|gb|ADL63964.1| ribosomal protein S3 [Podocarpus macrophyllus]
Length = 503
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 56/209 (26%), Positives = 90/209 (43%), Gaps = 21/209 (10%)
Query: 9 LF-RLGVNCT---WNSRWFARGSEYGALLHEDLKI-REYLQCHLKQ-AGVAKILIERTHK 62
F R+G T W S+ LL +I R++ ++ + +G K +I
Sbjct: 299 GFQRIGGARTYLLWRSK----KKILTYLLRRSKEILRKHFHTYIHKGSGSVKKVILGRIG 354
Query: 63 N------CRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINAT 114
+ + G+ G +++K+R LS TN+ + ++ +A+
Sbjct: 355 GVMRGIEMMLEIRLRGAGIPYGYNYYLNEVQKMRSLLSGRTNTNTFIGSVKIKSVYQSAS 414
Query: 115 LIAQSIAQQLERRVVFRRAMK---RAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEG 171
IAQ I+ +L R FR R + M G+++ SGRL GAE++RTEC G
Sbjct: 415 PIAQDISSRLRDRKSFRSIFYEPVRDIPLVMLKRVGGIRICCSGRLKGAEIARTECMEYG 474
Query: 172 RVPLQTLRAHIDYGTAVAETAYGSCGIKV 200
+ R IDY +A T YG G+KV
Sbjct: 475 KTSCNAFRHRIDYASARVSTRYGIXGVKV 503
>gi|62645168|ref|XP_575143.1| PREDICTED: ribosomal protein S3-like [Rattus norvegicus]
gi|109470011|ref|XP_001057158.1| PREDICTED: ribosomal protein S3-like [Rattus norvegicus]
Length = 243
Score = 93.9 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 78/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN---MTNS 97
E+L L + G +++ + T II+ R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSRVEVRVTPTRTEIIILGTRTQNVLGEKGRRIRELTAVVQKQFVFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA+G +V+ SG+L
Sbjct: 83 SVELYAEKVATGGLCAIAQAESLCYKLLGGLAVRRACYGVLRFIMESGAEGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSVKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|78190655|gb|ABB29649.1| ribosomal protein 3 small subunit [Suberites fuscus]
Length = 176
Score = 93.9 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 38/179 (21%), Positives = 75/179 (41%), Gaps = 11/179 (6%)
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKP 109
+ + + T II+ + R ++G+KG I ++ +K + + + L +V
Sbjct: 1 SGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFSFPDGTVELYAEKVAAR 60
Query: 110 EINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYL 169
+ A +S+ +L + RRA ++ M GA G +VI SG+L G + +++ ++
Sbjct: 61 GLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVIVSGKLRG-QRAKSMKFV 119
Query: 170 EGRVPLQTL--RAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
+G + R +ID G GIKV + D T + + +
Sbjct: 120 DGFMIHSGYPTREYIDSAVTHVHLRQGVLGIKVKIM-----LPHDPTGKSGPKKPLPDQ 173
>gi|70947163|ref|XP_743223.1| ribosomal protein S3 [Plasmodium chabaudi chabaudi]
gi|56522619|emb|CAH84779.1| ribosomal protein S3, putative [Plasmodium chabaudi chabaudi]
Length = 220
Score = 93.9 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 7/171 (4%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK----IRKKLSNMTN 96
E+L L + G + + + T +I+ + R ++G KG I + ++K+ N +
Sbjct: 21 EFLARILAEDGYSGVEVRVTPIRTEVIIRATRTREVLGDKGRRIRELTSLVQKRFFNKST 80
Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156
+ + L V + A A+S+ +L + + RRA ++ M GA G +VI SG+
Sbjct: 81 NSVELFAERVENRGLCAMAQAESLRYKLLKGLAVRRACYGVLRHIMESGAKGCEVIVSGK 140
Query: 157 LNGAELSRTECYLEGR--VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
L A+ +++ + +G + + ++ T A+ G GIKV + L
Sbjct: 141 LR-AQRAKSMKFKDGYLISTGEPSKRFVNTATRSAQLKQGVLGIKVKIMLP 190
>gi|302748794|gb|ADL63877.1| ribosomal protein S3 [Hydnocarpus anthelminthicus]
Length = 486
Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 80/165 (48%), Gaps = 5/165 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 323 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 381
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + ++ M+ G +G+++
Sbjct: 382 NTLIESVKIQSVYQSASPIAQDISFQLRNKTRSFRSIFSKIIKDIPLVMKKGVEGIRICC 441
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
SGRL GAE++RTEC G+ IDY A T YG G+
Sbjct: 442 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGV 486
>gi|156100003|ref|XP_001615729.1| 40S ribosomal protein S3 [Plasmodium vivax SaI-1]
gi|221059123|ref|XP_002260207.1| ribosomal protein S3 [Plasmodium knowlesi strain H]
gi|148804603|gb|EDL46002.1| 40S ribosomal protein S3, putative [Plasmodium vivax]
gi|193810280|emb|CAQ41474.1| ribosomal protein S3, putative [Plasmodium knowlesi strain H]
Length = 222
Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/171 (23%), Positives = 80/171 (46%), Gaps = 7/171 (4%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK----IRKKLSNMTN 96
E+L L + G + + + T +I+ + R ++G KG I + ++K+ N +
Sbjct: 23 EFLARILAEDGYSGVEVRVTPIRTEVIIRATRTREVLGDKGRRIRELTSLVQKRFFNKST 82
Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156
+ + L V + A A+S+ +L + + RRA ++ M GA G +VI SG+
Sbjct: 83 NSVELFAERVEHRGLCAMAQAESLRYKLLKGLAVRRACYGVLRHIMESGAKGCEVIVSGK 142
Query: 157 LNGAELSRTECYLEGR--VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
L A+ +++ + +G + + ++ T A+ G GIKV + L
Sbjct: 143 LR-AQRAKSMKFRDGYLISTGEPSKRFVNTATRSAQLKQGVLGIKVKIMLP 192
>gi|71748612|ref|XP_823361.1| 40S ribosomal protein S3 [Trypanosoma brucei TREU927]
gi|70833029|gb|EAN78533.1| 40S ribosomal protein S3, putative [Trypanosoma brucei]
gi|261333299|emb|CBH16294.1| 40S ribosomal protein S3, putative [Trypanosoma brucei gambiense
DAL972]
Length = 214
Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 78/183 (42%), Gaps = 6/183 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E+L+ L G A + T I++ S + ++G+KG I ++ ++ N
Sbjct: 22 EFLKRELADDGFAGVEHRVTPTRTEIVIRSTKTREVLGEKGRRIRELTACLQQRFNYKEG 81
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
++ L V ++A A+S+ +L + RRA ++ M GA G +V G++
Sbjct: 82 KLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIRYVMESGAKGCEVTIGGKI 141
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
G + +++ + +G + + +D T G+ G+ V + + + D +
Sbjct: 142 KG-QRAKSMTFRDGYMIKSGTAHKHFVDTATRHCHLRAGTIGVNVKIMRPQSMIEEDEVL 200
Query: 216 PAA 218
P
Sbjct: 201 PDV 203
>gi|302748844|gb|ADL63902.1| ribosomal protein S3 [Limeum africanum]
Length = 468
Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 51/172 (29%), Positives = 87/172 (50%), Gaps = 6/172 (3%)
Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90
LL +D K+ + ++ + G+ + LI+ II+ + R +++K+R
Sbjct: 299 NLLGKD-KVMKLIEKFIDLGGI-RELIKGIEMIIEIILKNRRIPYGYNSYLNELKKMRSF 356
Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGA 146
LSN TN+ + ++ +A+ IAQ I+ Q + +R FR + V+ M+ G
Sbjct: 357 LSNRTNTNTLIESVKIKSVYQSASPIAQDISFQPKNKRRSFRSIFSKIVKKIPLVMKKGV 416
Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+G+++ SGRL GAE++RTEC G+ L IDY +A T YG G+
Sbjct: 417 EGIRICCSGRLAGAEIARTECGKYGKTSCNVLHQKIDYASAEVSTRYGILGV 468
>gi|302749057|gb|ADL64008.1| ribosomal protein S3 [Sterculia balanghas]
Length = 476
Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 10/170 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLS---NM 94
K+ E ++ + G+ ++ I + + G + +K++K S N
Sbjct: 310 KVMELIEKFINLGGIEEL---IKGIEMIIEIILRNRRIPYGYNNSYFKKVKKMQSLLSNR 366
Query: 95 TNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVK 150
TN+ + ++ +A+ IAQ I+ QL ++ FR + + + M+ G G++
Sbjct: 367 TNTNTLIESVKIKSVYQSASPIAQDISFQLRKKTRSFRSIFSIIVKDIPLVMKKGVSGIR 426
Query: 151 VIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200
+ SGRL GAE++RTEC + IDY A T YG G+KV
Sbjct: 427 ICCSGRLKGAEIARTECGKYRKTSRNVFNQKIDYAPAEVSTRYGISGVKV 476
>gi|272716654|gb|ACZ95640.1| ribosomal protein S3 [Cunninghamia lanceolata]
Length = 587
Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 67/152 (44%), Gaps = 9/152 (5%)
Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + + G ++ K+R LS TN+ + ++ +A+ IAQ I
Sbjct: 434 GMMIRIIPKNRRIPYGYNYYLNEVRKMRSLLSGGTNANTFIGSVKIESVYQSASPIAQDI 493
Query: 121 AQQLERRVV-FRRAMKRAVQSAM------RFGADGVKVIASGRLNGAELSRTECYLEGRV 173
+ Q FR + + V+ R G G+++ GRL GAE++RTEC G+
Sbjct: 494 SFQPRDGTRSFRSILWKIVRDISLVMPFLRKGVGGIRICRPGRLKGAEIARTECREYGKT 553
Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
T R IDY A T YG GIKV++
Sbjct: 554 SCNTFRHQIDYAYAKVSTRYGILGIKVWIPFP 585
>gi|1350990|sp|P48153|RS3_MANSE RecName: Full=40S ribosomal protein S3
gi|527680|gb|AAB05575.1| ribosomal protein S3 [Manduca sexta]
Length = 243
Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 8/171 (4%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E+L L + G + + + T II+ + R ++G+KG I ++ +K N+
Sbjct: 24 EFLTRELAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQ 83
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 84 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 143
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLR 205
G + +++ +++G + + + DY T G GIKV + L
Sbjct: 144 RG-QRAKSMKFVDGLM-IHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLP 192
>gi|296040602|gb|ADG85269.1| ribosomal protein S3 [Silene noctiflora]
Length = 452
Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 5/171 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ + ++ G + LI+ II + R +++K+R LS T +
Sbjct: 277 KVMKLIEK-CIDLGKIRELIKGIEMMREIIPKNRRIPYGYDYHLNEVKKMRSFLSTRTKT 335
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSAMRFGAD---GVKVIA 153
+ ++ +A+LIA+ I+ QL+++ F + ++ G+++
Sbjct: 336 NTVIKSVKITSVYQSASLIAKDISFQLKKKSRDFSSIFSQIIRKIPLRMKKEIEGIRICC 395
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
SGRL GAE++RTEC G+ L DY +A+ T YG G+KV++S
Sbjct: 396 SGRLRGAEIARTECGKYGKTSCNVLNQKRDYASALVSTRYGIVGVKVWISY 446
>gi|315115341|gb|ADT80643.1| ribosomal protein S3 [Euphydryas aurinia]
Length = 243
Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 8/171 (4%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E+L L + G + + + T II+ + R ++G+KG I ++ +K N+
Sbjct: 24 EFLTRELAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQ 83
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 84 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 143
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLR 205
G + +++ +++G + + + DY T G GIKV + L
Sbjct: 144 RG-QRAKSMKFVDGLM-IHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLP 192
>gi|187233664|gb|ACD01096.1| ribosomal protein S1a [Adineta vaga]
Length = 215
Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 38/189 (20%), Positives = 77/189 (40%), Gaps = 11/189 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+ L + G + + I T + II+ + + ++G+KG I ++ + +
Sbjct: 25 EFFTRELAEDGYSGLEIRVTPQRTEIIIMATKTQAVLGEKGRRIRELTSVIQKRFGYPEN 84
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
I L +V + A A+S+ +L + RRA ++ M GA G ++I SG+L
Sbjct: 85 SIELFAQKVVTRGLCAIAQAESLRYKLMGGLPVRRACYGVLRFIMESGAQGCEIIVSGKL 144
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
G + ++ +++G + + ++ Y G GIKV + D
Sbjct: 145 RG-QRAKAMKFIDGLMIHSGDPVNDYVQYAVRHVLLRQGVLGIKVKIM-----LPHDPKE 198
Query: 216 PAAEHRVVE 224
+ +
Sbjct: 199 GKGVKKPLP 207
>gi|225429650|ref|XP_002281141.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 235
Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 73/169 (43%), Gaps = 6/169 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD---IEKIRKKLSNMTNS 97
E L L + G + + + T II+ + R ++G + + +K +
Sbjct: 23 EVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGNXXXXXXXLTSVVQKRFKFPEN 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L
Sbjct: 83 SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
A+ +++ + +G + Q ++ +ID G GIKV + L
Sbjct: 143 R-AQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLGIKVKIML 190
>gi|302748933|gb|ADL63946.1| ribosomal protein S3 [Passiflora suberosa]
Length = 474
Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 4/167 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + I++ ++ ++ K+R LSN TN+
Sbjct: 308 KVIELIEKFRNLGRIGEFKKGIEMMIEIILMRNSIIPYGYNSYLNEMTKMRSLLSNRTNT 367
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153
+ ++ +A+LIAQ I+ QL ++ FR + + + M+ G G+++
Sbjct: 368 NTLIESVKIKSVYQSASLIAQDISFQLRKKTRSFRSILTKIVKDIPLVMKKGVGGIRICC 427
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200
SGRL GAE++RTEC G+ L IDY A T YG G+KV
Sbjct: 428 SGRLAGAEIARTECGKYGKTSRNVLYQKIDYAPAEVSTRYGILGVKV 474
>gi|209489412|gb|ACI49174.1| hypothetical protein Csp3_JD02.002 [Caenorhabditis sp. PS1010]
Length = 247
Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 74/170 (43%), Gaps = 6/170 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
+L L + G + + + T +I+ + R ++G++G I+++ +
Sbjct: 25 NFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNVLGERGRRIKELTSVVQKRFGFEEG 84
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A +S+ +L + RRA ++ M GA GV+VI SG+L
Sbjct: 85 SVELFAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYGVLRFIMESGAQGVEVIVSGKL 144
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
G + ++ +++G + + +I + G GIKV + L
Sbjct: 145 RG-QRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQGVIGIKVKIMLP 193
>gi|289743349|gb|ADD20422.1| ribosomal protein S3 [Glossina morsitans morsitans]
Length = 263
Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/190 (21%), Positives = 79/190 (41%), Gaps = 13/190 (6%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + + ++G+KG I ++ + N
Sbjct: 45 EFLTRELAEDGYSGVEVRVTPARTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFEPG 104
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
I L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 105 RIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 164
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
G + +++ +++G + + + DY T G GIKV + D
Sbjct: 165 RG-QRAKSMKFVDGLM-IHSGDPCNDYVETATRHVLLRQGVLGIKVKIM-----LPYDPK 217
Query: 215 IPAAEHRVVE 224
+ +
Sbjct: 218 NKIGPKKPLP 227
>gi|71406574|ref|XP_805815.1| 40S ribosomal protein S3 [Trypanosoma cruzi strain CL Brener]
gi|70869366|gb|EAN83964.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
Length = 214
Score = 93.1 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 83/191 (43%), Gaps = 6/191 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E+L+ L G A + T I++ + + ++G+KG I ++ ++ +
Sbjct: 22 EFLKRELADDGFAGVEHRVTSTRTEIVIRATKTREVLGEKGRRIRELTACLQQRFHYKEG 81
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
++ L V ++A A+S+ +L + RRA ++ M GA G +V G++
Sbjct: 82 KLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIRHVMESGAKGCEVTVGGKI 141
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
G + +++ + +G + + +D T G+ G+KV + L + D + +
Sbjct: 142 KG-QRAKSMTFRDGYMIKSGTAHKNFVDVATRHCHLRAGTLGVKVKIMLPKSMQDEEEIL 200
Query: 216 PAAEHRVVEKD 226
P + K+
Sbjct: 201 PDVITVLEPKE 211
>gi|302748818|gb|ADL63889.1| ribosomal protein S3 [Impatiens pallida]
Length = 473
Score = 93.1 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 49/176 (27%), Positives = 81/176 (46%), Gaps = 12/176 (6%)
Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIR 88
LL +D K+ E ++ L + G IE I + + + G +++K+R
Sbjct: 304 NLLGKD-KVMELIEKFLGRIGEFLKGIEMM-----IEIILRKRRIPYGYNYYLNEVQKMR 357
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS---AMRF 144
LSN + + ++ +A+ IAQ I+ Q + FR + V++ M+
Sbjct: 358 SLLSNRAKTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKNMKLVMKK 417
Query: 145 GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200
G +G+++ SGR GAE++RTEC G+ IDY A T YG G+KV
Sbjct: 418 GVEGIRICCSGRSEGAEIARTECGKFGKTSRNVFNQKIDYAPAPVSTRYGISGVKV 473
>gi|302748881|gb|ADL63920.1| ribosomal protein S3 [Montinia caryophyllacea]
Length = 472
Score = 93.1 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 5/166 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 308 KVMELVEKFIDLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 366
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ ++ Q + FR + V+ M+ G +G+++
Sbjct: 367 NTLIESVKIKSVYQSASPIAQDLSFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 426
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIK 199
SGRL GAE++RTEC G+ IDY A T YG G+K
Sbjct: 427 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVK 472
>gi|223927729|gb|ACN23474.1| ribosomal protein S3 [Halimeda cuneata]
Length = 101
Score = 93.1 bits (230), Expect = 3e-17, Method: Composition-based stats.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ FRLG+ S W+A Y + ED +R L +A KI I R
Sbjct: 1 MGQKVHPLGFRLGITQPHLSNWYASKKYYSKYVLEDNFVRTLLSEKYNRARFEKIHISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKG 81
+ I++++ +P ++I +
Sbjct: 61 IEDHLEIVIHAQKPDILIKGEN 82
>gi|325968787|ref|YP_004244979.1| 30S ribosomal protein S3 [Vulcanisaeta moutnovskia 768-28]
gi|323707990|gb|ADY01477.1| 30S ribosomal protein S3 [Vulcanisaeta moutnovskia 768-28]
Length = 228
Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 56/198 (28%), Positives = 90/198 (45%), Gaps = 7/198 (3%)
Query: 29 YGALLHEDLK---IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIE 85
Y +L + +K I+E+L L + G + +T RII+Y+ RP IIG+KG ++
Sbjct: 11 YKKILQDKVKEWMIKEFLNYRLAKQGYVDSDVLKTPLGTRIIIYAERPNRIIGRKGVIVK 70
Query: 86 KIRKK-LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRF 144
++ + + V + PE+N +IA IA + + V FRRA A++ M
Sbjct: 71 ELTDLLSRKLDVENPIIDVTPIQSPELNPKIIANRIAWAMTKGVKFRRAGMIAIRQIMDG 130
Query: 145 GADGVKVIASGRLNGAELSRTECYLEGRVPLQTL--RAHIDYGTAVAETAYGSCGIKVYV 202
GA G +V SG+L +E SR E Y+ G + R + G GI+V +
Sbjct: 131 GAKGAEVTISGKLT-SERSRFEKYVFGVIYKNGFDSRTKVQRFVGQVLLKPGLYGIEVRI 189
Query: 203 SLRDEVSDSDSTIPAAEH 220
+ SD P +
Sbjct: 190 TPPIRFSDEFQIKPPSRE 207
>gi|1323710|gb|AAC00526.1| ribosomal protein S3 [Petunia sp.]
Length = 143
Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 41/127 (32%), Positives = 66/127 (51%), Gaps = 4/127 (3%)
Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS 140
+++K+R L N TN+ + ++ +A+ IAQ I+ Q + FR + V+
Sbjct: 2 NEVKKMRSLLYNRTNTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKD 61
Query: 141 A---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197
M+ G +G+++ SGRL GAE++RTEC G+ IDY A T YG G
Sbjct: 62 IPLVMKKGVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISG 121
Query: 198 IKVYVSL 204
+KV++S
Sbjct: 122 VKVWISY 128
>gi|84996723|ref|XP_953083.1| 40S ribosomal protein S3 [Theileria annulata strain Ankara]
gi|65304079|emb|CAI76458.1| 40S ribosomal protein S3, putative [Theileria annulata]
Length = 216
Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 41/191 (21%), Positives = 85/191 (44%), Gaps = 9/191 (4%)
Query: 23 FARGSEYGALLHE---DLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGK 79
FA S+ +++ + ++ E+L L + G + + + T II+ + R ++G+
Sbjct: 3 FAGKSKQKRFINDGVFNAELNEFLSRTLAEDGYSGVELRITPVRTEIIIRATRTREVLGE 62
Query: 80 KGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKR 136
K I ++ + + L V + A A+S+ +L + + RRA
Sbjct: 63 KARRIRELTSLVQKRFGFSSDSVELYAERVENRGLCAMAQAESLRYKLLKGLAIRRAAYG 122
Query: 137 AVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYG 194
++ M GA G +VI SG+L A+ +++ + +G + Q + +++ + G
Sbjct: 123 VLRQIMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYIISTGQPAQEYVNTAVRSVQLRQG 181
Query: 195 SCGIKVYVSLR 205
GIKV + L
Sbjct: 182 VLGIKVKIMLP 192
>gi|71017745|ref|XP_759103.1| hypothetical protein UM02956.1 [Ustilago maydis 521]
gi|46098895|gb|EAK84128.1| hypothetical protein UM02956.1 [Ustilago maydis 521]
Length = 239
Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 35/168 (20%), Positives = 68/168 (40%), Gaps = 13/168 (7%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E+ L + G + + TH II+ + ++G KG I ++ +K ++
Sbjct: 24 EFFTRELSEEGYSGCEVRVTHARTEIIIRATHTQEVLGDKGRRIRELTALVQKRFKFPDN 83
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V ++A +S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 84 SLELYAEKVQNRGLHAVAQCESLRYKLLGGLAVRRAAYGVLRFVMESGAKGCEVVISGKL 143
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
A +++ + + +D G GIKV +
Sbjct: 144 RAA-RAKSMKFTDD---------FVDEAVRHVLMKQGVLGIKVKIMQG 181
>gi|272716568|gb|ACZ95576.1| ribosomal protein S3 [Araucaria heterophylla]
Length = 731
Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 5/129 (3%)
Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLER--RVVFRRAMKRAVQ 139
++ K+R LS+ TN+ ++ ++ +A+LIAQ + L+ + FR + V+
Sbjct: 603 NEVRKMRSLLSDGTNTNTFIAPVKIESVFQSASLIAQDTSFLLKSNIKRSFRSIFNQIVR 662
Query: 140 SAM---RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196
S R G+++ SGRL GA+++RTE + IDY A T YG
Sbjct: 663 SIPKVTRERVRGIRIRCSGRLKGAKIARTEHRKYRKPSCNAFGRKIDYAYAKVFTRYGIL 722
Query: 197 GIKVYVSLR 205
G+KV++S R
Sbjct: 723 GVKVWISFR 731
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 9/79 (11%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54
M +K NPI RL N + +S WF+ + YG L+++D+ R+Y + K
Sbjct: 1 MARKANPISVRLHPNRSSDSNWFSD-NYYGKLVYQDVNSRDYFGSIRPPTRKTFGFRLGK 59
Query: 55 ILIERTHKNCRIIVYSARP 73
++ + K R ++ P
Sbjct: 60 CILHHSPK--RTFIHLFFP 76
>gi|302748547|gb|ADL63754.1| ribosomal protein S3 [Antirrhinum majus]
Length = 467
Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 5/164 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 305 KVMELIEKFIDLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 363
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL +R FR + V+ M+ G G+++
Sbjct: 364 NTLIESVKIKSVYQSASPIAQDISFQLRTKRRSFRSIFSQIVKKIPLVMKKGVTGIRICC 423
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197
SGR GAE++RTEC G+ IDY A T YG G
Sbjct: 424 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILG 467
>gi|125772881|ref|XP_001357699.1| GA19858 [Drosophila pseudoobscura pseudoobscura]
gi|194745943|ref|XP_001955444.1| GF16244 [Drosophila ananassae]
gi|195158647|ref|XP_002020197.1| GL13632 [Drosophila persimilis]
gi|54637431|gb|EAL26833.1| GA19858 [Drosophila pseudoobscura pseudoobscura]
gi|190628481|gb|EDV44005.1| GF16244 [Drosophila ananassae]
gi|194116966|gb|EDW39009.1| GL13632 [Drosophila persimilis]
Length = 246
Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 41/190 (21%), Positives = 79/190 (41%), Gaps = 13/190 (6%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + + ++G+KG I ++ + N
Sbjct: 25 EFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETG 84
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
I L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 85 RIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 144
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
G + +++ +++G + + + DY T G GIKV + D
Sbjct: 145 RG-QRAKSMKFVDGLM-IHSGDPCNDYVETATRHVLLRQGVLGIKVKIM-----LPYDPK 197
Query: 215 IPAAEHRVVE 224
+ +
Sbjct: 198 NKIGPKKPLP 207
>gi|168010855|ref|XP_001758119.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168015431|ref|XP_001760254.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168037634|ref|XP_001771308.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677397|gb|EDQ63868.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688634|gb|EDQ75010.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690575|gb|EDQ76941.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 230
Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 6/169 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E L L + G + + + T II+ + R ++G+KG I ++ +K
Sbjct: 23 ELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFQFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L
Sbjct: 83 TVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
A +++ + +G + + +ID G GIKV + L
Sbjct: 143 RAA-RAKSMKFKDGYMISSGSPVNDYIDSAVRHVMLRQGVLGIKVKIML 190
>gi|62083397|gb|AAX62423.1| ribosomal protein S3 [Lysiphlebus testaceipes]
Length = 234
Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 38/196 (19%), Positives = 80/196 (40%), Gaps = 10/196 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + ++G+KG I ++ +
Sbjct: 26 EFLTRELAEDGYSGVEVRVTPTRTEIILMATHTQSVLGEKGRRIRELTSVVQKRFGFKDG 85
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 86 TVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 145
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D T G GIKV + L +
Sbjct: 146 RG-QRAKSMKFVDGLMIHSGEPTADYVDTATRHVLLRQGVLGIKVKIMLPWDQNGKTGPK 204
Query: 212 DSTIPAAEHRVVEKDS 227
++++
Sbjct: 205 KPLPDNVSVAEPKEEN 220
>gi|272716590|gb|ACZ95592.1| ribosomal protein S3 [Thuja koraiensis]
Length = 645
Score = 92.8 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 13/156 (8%)
Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + + G ++ K+R LS TN+ + ++ +A+ IAQ I
Sbjct: 488 GMMIRIIPKNRRIPYGYNYYLNEVRKMRSLLSGGTNANTFIGSVKIKSVYQSASPIAQDI 547
Query: 121 AQQLERRVV-FRRAMKRAVQSAMR----------FGADGVKVIASGRLNGAELSRTECYL 169
+ Q FR + + V+ + G G+++ GRL GAE++RTEC
Sbjct: 548 SFQPRDGTRSFRSILWKIVRGLINSRALVMPKLRKGVGGIRICRPGRLKGAEIARTECME 607
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
G+ T R IDY A T YG G+KV++
Sbjct: 608 YGKTSCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 643
>gi|302748905|gb|ADL63932.1| ribosomal protein S3 [Nothofagus moorei]
Length = 476
Score = 92.8 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 5/167 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
++ E ++ + G+ +++ RI + + R +++K+R LSN T +
Sbjct: 311 RVMELIEKFIDLGGIGELIKGIEMMIERI-LRNRRIPYGYNSYLNEVKKMRSLLSNRTKT 369
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL +R FR + V+ M+ G +G+++
Sbjct: 370 NTLIESIKIKSVYQSASPIAQDISFQLRNKRRSFRSIFSKIVKDIPLVMKKGVEGIRICC 429
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200
SGR GAE++RTEC G+ IDY A T YG G+KV
Sbjct: 430 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKV 476
>gi|126465922|ref|YP_001041031.1| 30S ribosomal protein S3P [Staphylothermus marinus F1]
gi|152060907|sp|A3DNB3|RS3_STAMF RecName: Full=30S ribosomal protein S3P
gi|126014745|gb|ABN70123.1| SSU ribosomal protein S3P [Staphylothermus marinus F1]
Length = 224
Score = 92.8 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 49/201 (24%), Positives = 95/201 (47%), Gaps = 4/201 (1%)
Query: 26 GSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIE 85
S + + + + E+L + K AG A + + +T R+++Y+ PG IIG+ G+ I
Sbjct: 7 KSYFIDYSLKKVMLDEFLANYFKDAGYAGMELYKTPTGYRVVIYAEYPGRIIGRGGSIIR 66
Query: 86 KIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRF 144
K+ + ++++V+ VP P++NA ++A I + LE+ + +RR ++ M
Sbjct: 67 KLMTIMQTHFGLENVNITVSPVPDPDLNARIVAFRIVRALEKEIPYRRVAMAMLRRVMEA 126
Query: 145 GADGVKVIASGRLNGAELSRTECYLEGRVPLQT--LRAHIDYGTAVAETAYGSCGIKVYV 202
GA G ++I SG+L +E +R E GR+ + +D A G G++V +
Sbjct: 127 GAVGAEIIISGKLR-SERARYEKLKAGRIYKAGDMVDYVVDRAVGKALLKRGVYGVEVVI 185
Query: 203 SLRDEVSDSDSTIPAAEHRVV 223
I + + +
Sbjct: 186 VRPHLKPPDYVEIKSVKPEEL 206
>gi|71028826|ref|XP_764056.1| 40S ribosomal protein S3 [Theileria parva strain Muguga]
gi|68351010|gb|EAN31773.1| 40S ribosomal protein S3, putative [Theileria parva]
Length = 216
Score = 92.8 bits (229), Expect = 4e-17, Method: Composition-based stats.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 6/170 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+K I ++ +
Sbjct: 25 EFLSRTLAEDGYSGVELRITPVRTEIIIRATRTREVLGEKARRIRELTSLVQKRFGFSSD 84
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L V + A A+S+ +L + + RRA ++ M GA G +VI SG+L
Sbjct: 85 SVELYAERVENRGLCAMAQAESLRYKLLKGLAIRRAAYGVLRQIMESGAKGCEVIVSGKL 144
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
A+ +++ + +G + Q + +++ + G GIKV + L
Sbjct: 145 R-AQRAKSMKFKDGYIISTGQPAQEYVNTAVRSVQLRQGVLGIKVKIMLP 193
>gi|133907837|gb|ABO42378.1| ribosomal protein S3 [Elatine triandra]
gi|302748725|gb|ADL63843.1| ribosomal protein S3 [Elatine hexandra]
Length = 458
Score = 92.4 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 299 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 357
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQL-ERRVVFRRAMKRAVQSA---MRFGADGVKVIA 153
++ ++ +A+LIAQ I+ QL ++R FR + V+ M+ G +G+++
Sbjct: 358 NTLINSVKIQSVYQSASLIAQDISFQLRKKRRSFRSIFNKIVRDIPLVMKKGVEGIRICC 417
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGR GAE++RTEC G+ IDY A T YG
Sbjct: 418 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 458
>gi|17554770|ref|NP_498349.1| Ribosomal Protein, Small subunit family member (rps-3)
[Caenorhabditis elegans]
gi|1350989|sp|P48152|RS3_CAEEL RecName: Full=40S ribosomal protein S3
gi|9802859|gb|AAF99870.1| Ribosomal protein, small subunit protein 3, confirmed by transcript
evidence [Caenorhabditis elegans]
Length = 247
Score = 92.4 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 39/208 (18%), Positives = 82/208 (39%), Gaps = 23/208 (11%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
+L L + G + + + T +I+ + R ++G++G I+++ +
Sbjct: 25 NFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNVLGERGRRIKELTSVVQKRFGFEEG 84
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A +S+ +L + RRA ++ M GA GV+VI SG+L
Sbjct: 85 SVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYGVLRFIMESGAQGVEVIVSGKL 144
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR---------- 205
G + ++ +++G + + +I + G GIKV + L
Sbjct: 145 RG-QRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQGVIGIKVKIMLPYDPRGQNGPR 203
Query: 206 -------DEVSDSDSTIPAAEHRVVEKD 226
V + +P H +++
Sbjct: 204 NALPDHVQIVEPQEEVLPKEPHSQHKEE 231
>gi|272716626|gb|ACZ95619.1| ribosomal protein S3 [Chamaecyparis pisifera]
Length = 635
Score = 92.4 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 42/156 (26%), Positives = 67/156 (42%), Gaps = 13/156 (8%)
Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + + G ++ K+R LS TN+ + ++ +A+ IAQ I
Sbjct: 478 GMMIRIIPKNRRIPYGYNYYLNEVRKMRSLLSGGTNANTFIGSVKIKSVYQSASPIAQDI 537
Query: 121 AQQLERRVV-FRRAMKRAVQSAMR----------FGADGVKVIASGRLNGAELSRTECYL 169
+ Q FR + + V+ + G G+++ GRL GAE++RTEC
Sbjct: 538 SFQPRDGTRSFRSILWKIVRGLINSRALVMPKLRKGVGGIRICRPGRLKGAEIARTECRE 597
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
G+ T R IDY A T YG G+KV++
Sbjct: 598 YGKTSCNTFRHQIDYAYAKVSTRYGILGVKVWIPFP 633
>gi|166952343|gb|ABZ04254.1| ribosomal protein rps3 [Lineus viridis]
Length = 213
Score = 92.4 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 78/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E+L L + G + + + T II+ + + ++G+KG I ++ +K + S
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATKTQNVLGEKGRRIRELTSVVQKRFSFPES 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A +S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 TVELYAEKVATRGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPTNDYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKLGPK 201
Query: 212 DST 214
Sbjct: 202 RPL 204
>gi|119873216|ref|YP_931223.1| 30S ribosomal protein S3P [Pyrobaculum islandicum DSM 4184]
gi|152060899|sp|A1RV98|RS3_PYRIL RecName: Full=30S ribosomal protein S3P
gi|119674624|gb|ABL88880.1| SSU ribosomal protein S3P [Pyrobaculum islandicum DSM 4184]
Length = 217
Score = 92.4 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 56/183 (30%), Positives = 89/183 (48%), Gaps = 10/183 (5%)
Query: 29 YGALLHEDLK---IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIE 85
Y +L E+ K I+E+L+ L + G I +T RI++Y+ RP IIGKKG ++
Sbjct: 11 YKKILEENKKKWMIKEFLEYKLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGKKGVIVK 70
Query: 86 KIRKKLSNMTNSEI----HLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSA 141
+I L N E + V+++ PE+ +IA IA + + V FRR M AV+
Sbjct: 71 EISNILVNKLGVENPQIDVIDVSKIEAPEMFPKVIAYRIANAMAKGVRFRRVMFVAVRQL 130
Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIK 199
M GA G +++ SG+L+ E +R E G++ A + G GI+
Sbjct: 131 MEAGAKGFEIVVSGKLS-TERARFEKLTYGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIE 189
Query: 200 VYV 202
V +
Sbjct: 190 VRI 192
>gi|168010087|ref|XP_001757736.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168036169|ref|XP_001770580.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168066635|ref|XP_001785240.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663171|gb|EDQ49951.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678101|gb|EDQ64563.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691012|gb|EDQ77376.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 231
Score = 92.4 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 6/169 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E L L + G + + + T II+ + R ++G+KG I ++ +K
Sbjct: 23 ELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFQFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L
Sbjct: 83 TVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVIVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
A +++ + +G + + +ID G GIKV + L
Sbjct: 143 RAA-RAKSMKFKDGYMISSGSPVNDYIDSAVRHVMLRQGVLGIKVKIML 190
>gi|159483497|ref|XP_001699797.1| ribosomal protein S3, component of cytosolic 80S ribosome and 40S
small subunit [Chlamydomonas reinhardtii]
gi|158281739|gb|EDP07493.1| ribosomal protein S3 [Chlamydomonas reinhardtii]
Length = 230
Score = 92.4 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 72/169 (42%), Gaps = 6/169 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE-- 98
E L L + G + + + T II+ + R ++G+KG I ++ + N
Sbjct: 23 ELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPPD 82
Query: 99 -IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +VI SG+L
Sbjct: 83 SVELYAEKVSDRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
A +++ + +G + + +ID G GIKV +
Sbjct: 143 RAA-RAKSMKFKDGYMVSSGNPAKVYIDGAVRHVLLRQGVLGIKVKIMK 190
>gi|112984112|ref|NP_001037253.1| ribosomal protein S3 [Bombyx mori]
gi|54609285|gb|AAV34858.1| ribosomal protein S3 [Bombyx mori]
Length = 243
Score = 92.4 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 8/171 (4%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E+L L + G + + + T II+ + R ++G+KG I ++ +K N+
Sbjct: 24 EFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQ 83
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 84 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 143
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLR 205
G + +++ +++G + + + DY T G GIKV + L
Sbjct: 144 RG-QRAKSMKFVDGLM-IHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLP 192
>gi|300176595|emb|CBK24260.2| unnamed protein product [Blastocystis hominis]
Length = 239
Score = 92.4 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 45/202 (22%), Positives = 79/202 (39%), Gaps = 13/202 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L D E L L + G + + I ++ II+ + RP IIG+
Sbjct: 14 ADGVFYAEL---D----ELLNRELAEVGYSGVSIRKSTMKTEIIIRAPRPQEIIGENSRR 66
Query: 84 IEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ + + + L V + + A A+++ +L + RRA ++S
Sbjct: 67 INELTALVQKRFGFNENNVVLYAERVAERSLCAQTQAEALKYRLLAGLPVRRAATAVIRS 126
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTL--RAHIDYGTAVAETAYGSCGI 198
A+ GA G +VI SG+L + + + EG + + +D T G G+
Sbjct: 127 ALEAGAKGCEVIVSGKLR-QQRANAMKFKEGYMIKTGYACKEFVDEATRHVLVKQGMLGV 185
Query: 199 KVYVSLRDEVSDSDSTIPAAEH 220
KV + + A
Sbjct: 186 KVRIMKPTDPEGRLGPKKALPD 207
>gi|195452576|ref|XP_002073414.1| GK14111 [Drosophila willistoni]
gi|194169499|gb|EDW84400.1| GK14111 [Drosophila willistoni]
Length = 244
Score = 92.4 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 41/190 (21%), Positives = 79/190 (41%), Gaps = 13/190 (6%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + + ++G+KG I ++ + N
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
I L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 RIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
G + +++ +++G + + + DY T G GIKV + D
Sbjct: 143 RG-QRAKSMKFVDGLM-IHSGDPCNDYVETATRHVLLRQGVLGIKVKIM-----LPYDPK 195
Query: 215 IPAAEHRVVE 224
+ +
Sbjct: 196 NKIGPKKPLP 205
>gi|328541266|gb|AEB21857.1| ribosomal protein S3 [Drucella integristipula]
Length = 369
Score = 92.4 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 1/121 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 249 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKRSFRQICRSIFK 308
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE++RTE G L IDY A T YG G+
Sbjct: 309 QIKKCPYVKGIRIGCSGRLNGAEIARTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 368
Query: 199 K 199
K
Sbjct: 369 K 369
>gi|322783274|gb|EFZ10858.1| hypothetical protein SINV_09070 [Solenopsis invicta]
Length = 257
Score = 92.4 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 79/190 (41%), Gaps = 12/190 (6%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---- 96
E+L L + G + + + T II+ + ++G+KG I ++ + N
Sbjct: 39 EFLTRELAEDGYSGVEVRVTPNRTEIILLATHTQSVLGEKGRRIRELTSVVQKRFNFKEP 98
Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+
Sbjct: 99 QNVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGK 158
Query: 157 LNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
L G + +++ +++G + + +++ T G GIKV + D
Sbjct: 159 LRG-QRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLGIKVKIM-----LPWDPN 212
Query: 215 IPAAEHRVVE 224
+ + +
Sbjct: 213 GKSGPKKPLP 222
>gi|263173249|gb|ACY69890.1| S3e ribosomal protein [Cimex lectularius]
Length = 221
Score = 92.4 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 38/185 (20%), Positives = 76/185 (41%), Gaps = 6/185 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIE---KIRKKLSNMTNS 97
E+L L + G + I + T II+ + ++G+KG I + +K
Sbjct: 9 EFLTRELAEEGYSGIEMRMTPARTEIIIMATSTQNVLGEKGKRIRALTSVIQKRFQFAEG 68
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
++ L +V + A A+S+ +L + RRA ++ M GA G +++ SG+L
Sbjct: 69 KLDLYTEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMENGAKGCEIVVSGKL 128
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
G + +++ +++G + ++D T G G+KV + L +
Sbjct: 129 RG-QRAKSMKFVDGLMIHSGDPCNEYVDSATRHVLLRQGVLGVKVKIMLPWDTLGKIGLK 187
Query: 216 PAAEH 220
Sbjct: 188 KPLPD 192
>gi|302749039|gb|ADL63999.1| ribosomal protein S3 [Spathiphyllum wallisii]
Length = 481
Score = 92.4 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 10/180 (5%)
Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIR 88
L+ +D + E ++ + G+ ++ I + + G +++K+R
Sbjct: 306 NLMGKDKALAELIEKFIDLGGIGELNKGI---EMMIEIILRNRRIPYGYNSYLNEVQKMR 362
Query: 89 KKLSNMTNS-EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRA---MKRAVQSAMRF 144
LSN T++ + ++ +A+ IAQ I+ Q R FR + + + M
Sbjct: 363 SFLSNRTHTASALIESVKIKSVYQSASPIAQDISFQP-RNNSFRSIFSHIVKDIPLIMPK 421
Query: 145 GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
G +G+++ SGR GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 422 GVEGIRICCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRISY 481
>gi|254756771|ref|ZP_05208800.1| 30S ribosomal protein S3 [Bacillus anthracis str. Australia 94]
Length = 55
Score = 92.4 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 32/56 (57%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKIL 56
MGQK+NPI R+GV W SRWFA +Y LLHED+KIREY+ LK + VAK+
Sbjct: 1 MGQKVNPIGLRVGVIRDWESRWFAE-KDYATLLHEDIKIREYINVRLKDSAVAKVE 55
>gi|318087144|gb|ADV40164.1| ribosomal protein S3 [Latrodectus hesperus]
Length = 238
Score = 92.4 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 38/196 (19%), Positives = 82/196 (41%), Gaps = 11/196 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L+ L + G + + + T II+ + R ++G+KG I ++ + N
Sbjct: 24 EFLRRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTSVVQKRFNFPEG 83
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A +S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 84 SVELYAEKVAARGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 143
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + +++ G GIKV + L ++
Sbjct: 144 RG-QRAKSMKFVDGLMIHSGNPTNDYVETAVRHVLLRQGVLGIKVKIMLPWDPVGKIGPK 202
Query: 212 DS-TIPAAEHRVVEKD 226
+ + E++
Sbjct: 203 NPLPDNVSITEPKEEE 218
>gi|270266464|gb|ACZ65154.1| Rps3 [Eryngium maritimum]
Length = 67
Score = 92.0 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 42/67 (62%)
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200
+ G++V +GR++G E++R E EGRVPLQT+RA IDY + T YG GIK+
Sbjct: 1 ILTADTKGIQVQIAGRIDGKEIARVEWIREGRVPLQTIRAKIDYCSYTVRTIYGVLGIKI 60
Query: 201 YVSLRDE 207
++ + E
Sbjct: 61 WIFIDGE 67
>gi|268569106|ref|XP_002648176.1| C. briggsae CBR-RPS-3 protein [Caenorhabditis briggsae]
gi|187040329|emb|CAP20914.1| CBR-RPS-3 protein [Caenorhabditis briggsae AF16]
Length = 247
Score = 92.0 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 39/208 (18%), Positives = 82/208 (39%), Gaps = 23/208 (11%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
+L L + G + + + T +I+ + R ++G++G I+++ +
Sbjct: 25 NFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNVLGERGRRIKELTSVVQKRFGFEEG 84
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A +S+ +L + RRA ++ M GA GV+VI SG+L
Sbjct: 85 SVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYGVLRFIMESGAQGVEVIVSGKL 144
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR---------- 205
G + ++ +++G + + +I + G GIKV + L
Sbjct: 145 RG-QRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQGVIGIKVKIMLPYDPRGMNGPR 203
Query: 206 -------DEVSDSDSTIPAAEHRVVEKD 226
+ + IP H +++
Sbjct: 204 NALPDHVQIMEPQEEVIPKEPHSQHKEE 231
>gi|303390809|ref|XP_003073635.1| 40S ribosomal protein S3 [Encephalitozoon intestinalis ATCC 50506]
gi|303302782|gb|ADM12275.1| 40S ribosomal protein S3 [Encephalitozoon intestinalis ATCC 50506]
Length = 227
Score = 92.0 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 39/172 (22%), Positives = 86/172 (50%), Gaps = 6/172 (3%)
Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMT 95
++E+ + L G + + +II+ A+P IG+K +++ + + +
Sbjct: 31 LKEFFEKALVNEGFNTMELRMQETPIKIILKVAKPHEAIGEKKYRLKQFQHLVAQRLEVP 90
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155
+ + + V +V + + A + A I +++ V +RR++ A+++ GA G ++I SG
Sbjct: 91 DENVEIIVEKVHEKGLCALIQANFIREKMLGGVQYRRSVNMALKAVRHSGAQGCQIIVSG 150
Query: 156 RLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+L G + +++ + +G + ++ +ID G A ET G GI+V + L
Sbjct: 151 KLKG-QRAKSVKFQDGVLIHSGNPVKDYIDTGYATVETKQGVIGIQVRIMLP 201
>gi|302749025|gb|ADL63992.1| ribosomal protein S3 [Schoepfia schreberi]
Length = 470
Score = 92.0 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 45/167 (26%), Positives = 77/167 (46%), Gaps = 9/167 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ I + G+ G +++K+R LSN T
Sbjct: 307 KVMELIEKFIDLGGIGEL---IKGIEMMIEIILRNRGIPYGYNSYLNEVKKMRSLLSNRT 363
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++
Sbjct: 364 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRI 423
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
SGRL GAE++RTEC G+ IDY A T YG G+
Sbjct: 424 CCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGV 470
>gi|332016343|gb|EGI57256.1| 40S ribosomal protein S3 [Acromyrmex echinatior]
Length = 242
Score = 92.0 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 79/190 (41%), Gaps = 12/190 (6%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---- 96
E+L L + G + + + T II+ + ++G+KG I ++ + N
Sbjct: 24 EFLTRELAEDGYSGVEVRVTPNRTEIILLATHTQSVLGEKGRRIRELTSVVQKRFNFKEP 83
Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+
Sbjct: 84 QNVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGK 143
Query: 157 LNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
L G + +++ +++G + + +++ T G GIKV + D
Sbjct: 144 LRG-QRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLGIKVKIM-----LPWDPN 197
Query: 215 IPAAEHRVVE 224
+ + +
Sbjct: 198 GKSGPKKPLP 207
>gi|195113493|ref|XP_002001302.1| GI22047 [Drosophila mojavensis]
gi|193917896|gb|EDW16763.1| GI22047 [Drosophila mojavensis]
Length = 246
Score = 92.0 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 41/190 (21%), Positives = 79/190 (41%), Gaps = 13/190 (6%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + + ++G+KG I ++ + N
Sbjct: 25 EFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETG 84
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
I L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 85 RIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 144
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
G + +++ +++G + + + DY T G GIKV + D
Sbjct: 145 RG-QRAKSMKFVDGLM-IHSGDPCNDYVETATRHVLLRQGVLGIKVKIM-----LPYDPK 197
Query: 215 IPAAEHRVVE 224
+ +
Sbjct: 198 NKIGPKKPLP 207
>gi|332024589|gb|EGI64787.1| 40S ribosomal protein S3 [Acromyrmex echinatior]
Length = 242
Score = 92.0 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 79/190 (41%), Gaps = 12/190 (6%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---- 96
E+L L + G + + + T II+ + ++G+KG I ++ + N
Sbjct: 24 EFLTRELAEDGYSGVEVRVTPNRTEIILLATHTQSVLGEKGRRIRELTSVVQKRFNFKEP 83
Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+
Sbjct: 84 QNVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGK 143
Query: 157 LNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
L G + +++ +++G + + +++ T G GIKV + D
Sbjct: 144 LRG-QRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLGIKVKIM-----LPWDPN 197
Query: 215 IPAAEHRVVE 224
+ + +
Sbjct: 198 GKSGPKKPLP 207
>gi|156408429|ref|XP_001641859.1| predicted protein [Nematostella vectensis]
gi|156228999|gb|EDO49796.1| predicted protein [Nematostella vectensis]
Length = 240
Score = 92.0 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 38/191 (19%), Positives = 77/191 (40%), Gaps = 11/191 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPIRTEIIILATRTQNVLGEKGRRIRELTSVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A +S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
G + +++ +++G + + ++D G GIKV + D T
Sbjct: 143 RG-QRAKSMKFVDGLMVHAGEPTTHYVDTAVRHVYLRQGVLGIKVKIM-----LPWDPTG 196
Query: 216 PAAEHRVVEKD 226
+ +
Sbjct: 197 KTGPKKPLPDQ 207
>gi|324513448|gb|ADY45526.1| 40S ribosomal protein S3 [Ascaris suum]
Length = 249
Score = 92.0 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 74/170 (43%), Gaps = 6/170 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
+L L + G + + + RT +I+ + R ++G++G I ++ +
Sbjct: 25 NFLMKELAEDGYSGVEVRRTPARAEVIIMATRTQSVLGERGRRIRELTSVVQKRFGFAEG 84
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A +S+ +L + RRA ++ M A G +VI SG+L
Sbjct: 85 SVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYGVLRFIMESSAQGCEVIVSGKL 144
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
G + +++ +++G + Q + +I + G GIKV + L
Sbjct: 145 RG-QRAKSMKFVDGLMIHSGQPVNDYIQQAVRHVQLRQGVLGIKVKIMLP 193
>gi|328541216|gb|AEB21832.1| ribosomal protein S3 [Hygrolembidium rigidum]
Length = 371
Score = 92.0 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ + K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLRKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFR 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SG LNGAE+++TE G L IDY A T YG G+
Sbjct: 310 QIKKCPYVKGIRIGCSGXLNGAEIAKTEYKKYGETSLHVFSDQIDYAKTQASTPYGILGV 369
Query: 199 KV 200
KV
Sbjct: 370 KV 371
>gi|302748659|gb|ADL63810.1| ribosomal protein S3 [Clidemia petiolaris]
Length = 464
Score = 92.0 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 43/166 (25%), Positives = 80/166 (48%), Gaps = 5/166 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + + +++K+R LSN T +
Sbjct: 300 KVMELIEKFIDLGGIVEL-IKGIEMMIEIILRNRQIPYGYNSYLNEVKKMRSLLSNRTKT 358
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRA---MKRAVQSAMRFGADGVKVIA 153
++ ++ +A+ IAQ I+ Q ++ FR + + + M+ G +G+++
Sbjct: 359 NTNIESVKIKSVYQSASPIAQDISFQPRNKKRSFRSILTKIVKDIPLVMKKGVEGIRICC 418
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIK 199
SGR GAE++RTEC G+ IDY A T YG G+K
Sbjct: 419 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVK 464
>gi|209693449|ref|NP_001129413.1| ribosomal protein S3 [Acyrthosiphon pisum]
gi|239790667|dbj|BAH71881.1| ACYPI005949 [Acyrthosiphon pisum]
Length = 245
Score = 92.0 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 39/196 (19%), Positives = 83/196 (42%), Gaps = 12/196 (6%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E+L L + G + + + I++ + R ++G KG I ++ +K + +
Sbjct: 24 EFLTRELAEDGYSGVDVRAAPSRTEIVISATRTQNVLGDKGRRIRELTSLIQKRFDFKDK 83
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 84 AVELFAEKVAQRGLCAVAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 143
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLR----DEVSD 210
G + +++ +++G + + + DY T G GIKV + L ++
Sbjct: 144 RG-QRAKSMKFVDGLM-IHSGDPCNDYVNVATRHVLLRQGVLGIKVKIMLPWDQTGKLGP 201
Query: 211 SDSTIPAAEHRVVEKD 226
+++
Sbjct: 202 KKPLPDNVSVAEPKEE 217
>gi|307167583|gb|EFN61127.1| 40S ribosomal protein S3 [Camponotus floridanus]
Length = 242
Score = 92.0 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 79/190 (41%), Gaps = 12/190 (6%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---- 96
E+L L + G + + + T II+ + ++G+KG I ++ + N
Sbjct: 24 EFLTRELAEDGYSGVEVRVTPNRTEIILLATHTQSVLGEKGRRIRELTSVVQKRFNFKEP 83
Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+
Sbjct: 84 QNVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGK 143
Query: 157 LNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
L G + +++ +++G + + +++ T G GIKV + D
Sbjct: 144 LRG-QRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLGIKVKIM-----LPWDPN 197
Query: 215 IPAAEHRVVE 224
+ + +
Sbjct: 198 GKSGPKKPLP 207
>gi|268619106|gb|ACZ13329.1| 40S ribosomal protein S3 [Bursaphelenchus xylophilus]
Length = 272
Score = 92.0 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 73/189 (38%), Gaps = 11/189 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
+L L + G A + + R +I+ + R ++G++G I ++ +
Sbjct: 45 NFLMKELAEDGYAGVEVRRAPTRTEVIITATRTQNVLGERGRRIRELTAVVQKRFGFNVG 104
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
++ L +V + A +S+ +L + RRA ++ M A G ++I SG+L
Sbjct: 105 QVELYAEKVANRGLCAVAQCESLRFKLCGGLAVRRACYGVLRFIMESQAKGCEIIVSGKL 164
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
G + ++ +++G + + ++ + G GIKV + D
Sbjct: 165 RG-QRAKAMKFVDGIMIHSGHPVNEYVQQAVRHVQLRQGVLGIKVKIM-----LPHDPEG 218
Query: 216 PAAEHRVVE 224
+
Sbjct: 219 KIGPRNPLP 227
>gi|254458781|ref|ZP_05072205.1| 30S ribosomal protein S3 [Campylobacterales bacterium GD 1]
gi|207084547|gb|EDZ61835.1| 30S ribosomal protein S3 [Campylobacterales bacterium GD 1]
Length = 75
Score = 92.0 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 31/65 (47%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 162 LSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
++RTE YLEGRVPL TLRA IDYG A A T YG G+KV++ + EV A E +
Sbjct: 1 MARTEWYLEGRVPLHTLRAKIDYGFAEAHTTYGIIGVKVWIF-KGEVLTKGIPAEAKEEK 59
Query: 222 VVEKD 226
+++
Sbjct: 60 QEKQE 64
>gi|302749125|gb|ADL64042.1| ribosomal protein S3 [Zamia integrifolia]
Length = 362
Score = 91.6 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 4/162 (2%)
Query: 43 LQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLS 102
L L G LI+ II+ + R +++K+R L + TN+ +
Sbjct: 201 LMEKLIDLGGIGELIKGIGMMIEIILRNRRIPYGYNYYLNEVQKMRSLLPDGTNTNTSIG 260
Query: 103 VNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQS---AMRFGADGVKVIASGRLN 158
++ +A+LIAQ I+ Q FR + V+ AM G+++ SGR
Sbjct: 261 SVKIESVYQSASLIAQDISFQPRNGTGSFRSIFGQIVRDMTCAMPKRVKGIRICRSGRSK 320
Query: 159 GAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200
GAE++RTEC G+ ID+ A T YG G+KV
Sbjct: 321 GAEIARTECREYGKTSCNVFHQKIDHAFAKVYTRYGILGVKV 362
>gi|78190549|gb|ABB29596.1| ribosomal protein 3 small subunit [Platynereis dumerilii]
Length = 188
Score = 91.6 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 38/177 (21%), Positives = 75/177 (42%), Gaps = 10/177 (5%)
Query: 47 LKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSV 103
L + G + + + T II+ + R ++G+KG I ++ +K N + L
Sbjct: 1 LAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTSVVQKRFNFQEGTVELYA 60
Query: 104 NEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELS 163
+V + A A+S+ +L + RRA ++ M GA G +V+ SG+L G + +
Sbjct: 61 EKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG-QRA 119
Query: 164 RTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDSDST 214
++ +++G + ++D G GIKV + L ++
Sbjct: 120 KSMKFVDGLMIHSGDPTNDYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKRPL 176
>gi|71408264|ref|XP_806547.1| 40S ribosomal protein S3 [Trypanosoma cruzi strain CL Brener]
gi|71653987|ref|XP_815622.1| 40S ribosomal protein S3 [Trypanosoma cruzi strain CL Brener]
gi|71656239|ref|XP_816670.1| 40S ribosomal protein S3 [Trypanosoma cruzi strain CL Brener]
gi|70870324|gb|EAN84696.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
gi|70880689|gb|EAN93771.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
gi|70881813|gb|EAN94819.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
Length = 214
Score = 91.6 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 83/191 (43%), Gaps = 6/191 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E+L+ L G A + T I++ + + ++G+KG I ++ ++ +
Sbjct: 22 EFLKRELADDGFAGVEHRVTSTRTEIVIRATKTREVLGEKGRRIRELTACLQQRFHYKEG 81
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
++ L V ++A A+S+ +L + RRA ++ M GA G +V G++
Sbjct: 82 KLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIRHVMESGAKGCEVTVGGKI 141
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
G + +++ + +G + + +D T G+ G+KV + L + + + +
Sbjct: 142 KG-QRAKSMTFRDGYMIKSGTAHKNFVDVATRHCHLRAGTLGVKVKIMLPKSMQNEEEIL 200
Query: 216 PAAEHRVVEKD 226
P + K+
Sbjct: 201 PDVITVLEPKE 211
>gi|302748957|gb|ADL63958.1| ribosomal protein S3 [Pinguicula vulgaris]
Length = 472
Score = 91.6 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 9/168 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ L + ++ I + + + G +++K+R LSN T
Sbjct: 308 KVMELIEKCLNLGRIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEVKKMRSFLSNRT 364
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSAM---RFGADGVKV 151
+ ++ ++ +A+ IAQ I+ QL + FR + V++ + G G+++
Sbjct: 365 ATNTNIESVKIKSVYQSASPIAQDISFQLRTKTRSFRSIFSQIVKNIPLVTKKGVTGIRI 424
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIK 199
SGR GAE++RTEC G+ IDY A T YG G+K
Sbjct: 425 CCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILGVK 472
>gi|302748615|gb|ADL63788.1| ribosomal protein S3 [Cananga odorata]
Length = 460
Score = 91.6 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 5/169 (2%)
Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE 98
I E + + + + I+ II+ + +++KIR LSN T +
Sbjct: 293 IGELIDKFIDLGRIGEF-IKGIEMMREIILRNRIIPYRYNSYLNEVQKIRSLLSNRTKTN 351
Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIAS 154
+ ++ +A+ IAQ I+ Q + FR + ++ M G +G+++ S
Sbjct: 352 TLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIKLVMPKGVEGIRICCS 411
Query: 155 GRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
GR GAE++RT+C G+ IDY A T YG G+KV +S
Sbjct: 412 GRSEGAEIARTKCGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVKVRIS 460
>gi|38048231|gb|AAR10018.1| similar to Drosophila melanogaster RpS3 [Drosophila yakuba]
Length = 215
Score = 91.6 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 43/190 (22%), Positives = 79/190 (41%), Gaps = 13/190 (6%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + + ++G+KG I ++ + N
Sbjct: 25 EFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETG 84
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
I L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 85 RIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKGCEVVVSGKL 144
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
G + +++ +++G + + + DY T G GIKV V D
Sbjct: 145 RG-QRAKSMKFVDGLM-IHSGDPCNDYVETATRHVLLRQGVLGIKVKVM-----LPYDPK 197
Query: 215 IPAAEHRVVE 224
+ V
Sbjct: 198 NKIGPKKPVP 207
>gi|170577011|ref|XP_001893846.1| 40S ribosomal protein S3 [Brugia malayi]
gi|158599891|gb|EDP37316.1| 40S ribosomal protein S3, putative [Brugia malayi]
Length = 250
Score = 91.6 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 37/170 (21%), Positives = 74/170 (43%), Gaps = 6/170 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
+L L + G + + + RT II+ + R ++G++G I ++ +
Sbjct: 26 NFLMKELAEDGYSGVEVRRTPARAEIIILATRTQSVLGERGRRIRELTSVVQKRFGFADG 85
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A +S+ +L + RRA ++ M A G +VI SG+L
Sbjct: 86 TVELYAEKVTNRGLCAVAQCESLRYKLVGGLAVRRACYGVLRFIMESNAQGCEVIVSGKL 145
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
G + +++ +++G + Q + +I + G GIKV + L
Sbjct: 146 RG-QRAKSMKFVDGLMIHSGQPVNDYIQQAVRHVQLRQGVLGIKVKIMLP 194
>gi|326521618|dbj|BAK00385.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 270
Score = 91.6 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 76/189 (40%), Gaps = 11/189 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+ L + G + + I T + II+ + + ++G+KG I ++ + +
Sbjct: 25 EFFTRELAEDGYSGLEIRVTPQRTEIIIMATKTQAVLGEKGRRIRELTSVIQKRFGYPEN 84
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
I L +V + A A+S+ +L RRA ++ M GA G +++ SG+L
Sbjct: 85 SIELFAQKVVSRGLCAIAQAESLRYKLMGGFPVRRACYGVLRFIMDSGAQGCEIVVSGKL 144
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
G + ++ +++G + + ++ + G GIKV + D
Sbjct: 145 RG-QRAKAMKFIDGLMIHSGDPVNDYVQFAVRHVLLRQGVLGIKVKIM-----LPHDPKE 198
Query: 216 PAAEHRVVE 224
+ +
Sbjct: 199 GKGVKKPLP 207
>gi|28630346|gb|AAN77894.1| ribosomal protein S3 [Petromyzon marinus]
Length = 206
Score = 91.6 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 6/170 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ + N
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTSVIQKRFNFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A +S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVANRGLCAIAQCESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
G + +++ +++G + + ++D G GIKV + L
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNHYVDTAIRHVLLRQGGLGIKVKIMLP 191
>gi|312071288|ref|XP_003138539.1| 40S ribosomal protein S3 [Loa loa]
gi|307766296|gb|EFO25530.1| 40S ribosomal protein S3 [Loa loa]
Length = 249
Score = 91.6 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 37/170 (21%), Positives = 74/170 (43%), Gaps = 6/170 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
+L L + G + + + RT II+ + R ++G++G I ++ +
Sbjct: 25 NFLMKELAEDGYSGVEVRRTPARAEIIILATRTQSVLGERGRRIRELTSVVQKRFGFADG 84
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A +S+ +L + RRA ++ M A G +VI SG+L
Sbjct: 85 TVELYAEKVTNRGLCAVAQCESLRYKLVGGLAVRRACYGVLRFIMESNAQGCEVIVSGKL 144
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
G + +++ +++G + Q + +I + G GIKV + L
Sbjct: 145 RG-QRAKSMKFVDGLMIHSGQPVNDYIQQAVRHVQLRQGVLGIKVKIMLP 193
>gi|302748820|gb|ADL63890.1| ribosomal protein S3 [Ipomoea batatas]
Length = 482
Score = 91.6 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 5/166 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + R +++KIR LSN TN+
Sbjct: 318 KVMELIENFIDLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKIRSLLSNRTNT 376
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q ++ FR + V+ M+ G +G+++
Sbjct: 377 NTLIESVKIKSVYQSASPIAQDISFQPRNKKRSFRSIFSKIVKDIPLVMKKGVEGIRICC 436
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIK 199
SGRL GAE++RTEC G+ IDY A T YG G+K
Sbjct: 437 SGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVK 482
>gi|149287156|gb|ABR23477.1| 40S ribosomal protein S3 [Ornithodoros parkeri]
Length = 240
Score = 91.6 bits (226), Expect = 8e-17, Method: Composition-based stats.
Identities = 38/183 (20%), Positives = 82/183 (44%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E+L+ L + G + + + T +N II+ + R ++G+KG I ++ +K + +
Sbjct: 23 EFLRRELAEDGYSGVEVRVTPQNTEIIILATRTQSVLGEKGRRIRELTSVVQKRFSFPEN 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A +S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 TVELYAEKVASRGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + +++ G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGEPTNDYVETAVRHVLLRQGVLGIKVKIMLPWDPNGKLGPK 201
Query: 212 DST 214
Sbjct: 202 RPL 204
>gi|18496083|emb|CAD12886.1| ribosomal protein S3 [Drosophila virilis]
Length = 244
Score = 91.6 bits (226), Expect = 8e-17, Method: Composition-based stats.
Identities = 41/190 (21%), Positives = 79/190 (41%), Gaps = 13/190 (6%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + + ++G+KG I ++ + N
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
I L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 RIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
G + +++ +++G + + + DY T G GIKV + D
Sbjct: 143 RG-QRAKSMKFVDGLM-IHSGDPCNDYVETATRHVLLRQGVLGIKVKIM-----LPYDPK 195
Query: 215 IPAAEHRVVE 224
+ +
Sbjct: 196 NKIGPKKPLP 205
>gi|195502880|ref|XP_002098418.1| RpS3 [Drosophila yakuba]
gi|194184519|gb|EDW98130.1| RpS3 [Drosophila yakuba]
Length = 246
Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 42/190 (22%), Positives = 79/190 (41%), Gaps = 13/190 (6%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + + ++G+KG I ++ + N
Sbjct: 25 EFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETG 84
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
I L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 85 RIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKGCEVVVSGKL 144
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
G + +++ +++G + + + DY T G GIKV V D
Sbjct: 145 RG-QRAKSMKFVDGLM-IHSGDPCNDYVETATRHVLLRQGVLGIKVKVM-----LPYDPK 197
Query: 215 IPAAEHRVVE 224
+ +
Sbjct: 198 NKIGPKKPLP 207
>gi|116090821|gb|ABJ55992.1| ribosomal protein S3 [Ostrinia nubilalis]
Length = 241
Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 79/171 (46%), Gaps = 8/171 (4%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E+L L + G + + + T II+ + R ++G+KG I ++ +K N+
Sbjct: 24 EFLTRELAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQ 83
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 84 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKL 143
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLR 205
G + +++ +++G + + + DY T G GIKV + L
Sbjct: 144 RG-QRAKSMKFVDGLM-IHSGDPCNDYVNTATRHVLLRQGVLGIKVKIMLP 192
>gi|195331295|ref|XP_002032338.1| GM26502 [Drosophila sechellia]
gi|195573126|ref|XP_002104546.1| GD21014 [Drosophila simulans]
gi|194121281|gb|EDW43324.1| GM26502 [Drosophila sechellia]
gi|194200473|gb|EDX14049.1| GD21014 [Drosophila simulans]
Length = 246
Score = 91.2 bits (225), Expect = 9e-17, Method: Composition-based stats.
Identities = 42/190 (22%), Positives = 79/190 (41%), Gaps = 13/190 (6%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + + ++G+KG I ++ + N
Sbjct: 25 EFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETG 84
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
I L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 85 RIELYAEKVASRGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKGCEVVVSGKL 144
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
G + +++ +++G + + + DY T G GIKV V D
Sbjct: 145 RG-QRAKSMKFVDGLM-IHSGDPCNDYVETATRHVLLRQGVLGIKVKVM-----LPYDPK 197
Query: 215 IPAAEHRVVE 224
+ +
Sbjct: 198 NKIGPKKPLP 207
>gi|253807616|gb|ACT36194.1| ribosomal protein S3 [Helicosporidium sp. ex Simulium jonesi]
Length = 384
Score = 91.2 bits (225), Expect = 9e-17, Method: Composition-based stats.
Identities = 45/172 (26%), Positives = 77/172 (44%), Gaps = 7/172 (4%)
Query: 40 REYLQ-CHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE 98
+ Y++ L + ++K L + I YS P L I KK + +LS ++
Sbjct: 214 KNYIKRKFLFHSYLSKNLRLNPNIFYNIQSYSINPKLNI-KKRMIQNHLENQLSTYSHLN 272
Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAV-QSAMRFGADGVKVIASGRL 157
+ L+ + +AT +A I LER++ F R + + Q G+++I SGRL
Sbjct: 273 VELTPFVLSNDWQSATFLADEIVFFLERKIGFLRIKNQLLSQLNRYPWIKGLRIICSGRL 332
Query: 158 ----NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
++ + E G L T IDY + A T +GS G+KV++ +
Sbjct: 333 GFKGKKSQRASQEYVKYGETSLNTFDRKIDYASKTAYTPFGSVGVKVWICYK 384
Score = 61.5 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 5/112 (4%)
Query: 1 MGQKINPILFRLGV-NCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER 59
MGQKINPI RL N +S WF+ Y L DL + +Y +K + + +
Sbjct: 1 MGQKINPIALRLSHGNRLKDSSWFSNKYFYKKSLILDLLLMKYYNDFIKHFKLPQPRLSI 60
Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEI 111
++ +I + I K + ++ + N+ + + + + + +
Sbjct: 61 QYQFHQINI----QPFICIPKQSRFQRSKFFRLNINQNLLKKTSFKNKRYPL 108
>gi|255721609|ref|XP_002545739.1| 40S ribosomal protein S3 [Candida tropicalis MYA-3404]
gi|240136228|gb|EER35781.1| 40S ribosomal protein S3 [Candida tropicalis MYA-3404]
Length = 248
Score = 91.2 bits (225), Expect = 9e-17, Method: Composition-based stats.
Identities = 46/186 (24%), Positives = 82/186 (44%), Gaps = 13/186 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ L + G A + + +T IIV ++ ++G++G
Sbjct: 14 ADGVFYAEL-------NEFFTRELAEQGYAGVEVRKTPSKLEIIVKASNTQGVLGEQGRR 66
Query: 84 IEKIRK---KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ K ++ I + V + ++A + A+ + +L + RRA ++
Sbjct: 67 IHELTSLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEGLKAKLLNGLPIRRAAYGVLRF 126
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
AM GA GV+V+ SG+L A ++++ Y +G + Q R ID G GI
Sbjct: 127 AMGAGAKGVEVVISGKLRAA-RAKSQKYADGFMIHSGQPTRDFIDIAIRHVLMRQGVLGI 185
Query: 199 KVYVSL 204
KV +
Sbjct: 186 KVKIMK 191
>gi|195390345|ref|XP_002053829.1| RpS3 [Drosophila virilis]
gi|194151915|gb|EDW67349.1| RpS3 [Drosophila virilis]
Length = 246
Score = 91.2 bits (225), Expect = 9e-17, Method: Composition-based stats.
Identities = 41/190 (21%), Positives = 79/190 (41%), Gaps = 13/190 (6%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + + ++G+KG I ++ + N
Sbjct: 25 EFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETG 84
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
I L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 85 RIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 144
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
G + +++ +++G + + + DY T G GIKV + D
Sbjct: 145 RG-QRAKSMKFVDGLM-IHSGDPCNDYVETATRHVLLRQGVLGIKVKIM-----LPYDPK 197
Query: 215 IPAAEHRVVE 224
+ +
Sbjct: 198 NKIGPKKPLP 207
>gi|223927392|gb|ACN23317.1| ribosomal protein S3 [Halimeda pygmaea]
Length = 144
Score = 91.2 bits (225), Expect = 9e-17, Method: Composition-based stats.
Identities = 46/135 (34%), Positives = 68/135 (50%), Gaps = 4/135 (2%)
Query: 1 MGQKINPILFRLGVNCT--WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIE 58
MGQK++P+ FRLG+ S+W+A Y + ED +R L +AG+ KI I
Sbjct: 1 MGQKVHPLGFRLGITQHQLHLSQWYASKKYYSKYVLEDNFLRTILTKKYVRAGIEKIEIS 60
Query: 59 RTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVN--EVPKPEINATLI 116
R +N IV A+ I+G KG +I+K KKL E + K +I A+ I
Sbjct: 61 RKIENHLEIVIQAQKPTILGVKGLEIQKEIKKLIYKYRGENGKLKVVLYIMKSKITASSI 120
Query: 117 AQSIAQQLERRVVFR 131
A I LE+R+ ++
Sbjct: 121 ADFIIANLEKRIPYK 135
>gi|195053458|ref|XP_001993643.1| GH20000 [Drosophila grimshawi]
gi|193895513|gb|EDV94379.1| GH20000 [Drosophila grimshawi]
Length = 246
Score = 91.2 bits (225), Expect = 9e-17, Method: Composition-based stats.
Identities = 41/190 (21%), Positives = 79/190 (41%), Gaps = 13/190 (6%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + + ++G+KG I ++ + N
Sbjct: 25 EFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETG 84
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
I L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 85 RIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 144
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
G + +++ +++G + + + DY T G GIKV + D
Sbjct: 145 RG-QRAKSMKFVDGLM-IHSGDPCNDYVETATRHVLLRQGVLGIKVKIM-----LPYDPK 197
Query: 215 IPAAEHRVVE 224
+ +
Sbjct: 198 NKIGPKKPLP 207
>gi|159117007|ref|XP_001708724.1| Ribosomal protein S3 [Giardia lamblia ATCC 50803]
gi|157436837|gb|EDO81050.1| Ribosomal protein S3 [Giardia lamblia ATCC 50803]
gi|308158393|gb|EFO61089.1| Ribosomal protein S3 [Giardia lamblia P15]
Length = 217
Score = 91.2 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 44/205 (21%), Positives = 87/205 (42%), Gaps = 13/205 (6%)
Query: 29 YGALLHE---DLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIE 85
Y L++ + ++ E+ L AG A + RT + +I+ A P +++G +
Sbjct: 14 YSKYLNDCIMEAELHEFFSRELVDAGYASCSLCRTIDSICVIIQCAEPEVVMGDNHYRLH 73
Query: 86 KIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAM 142
KI ++ V+++ K ++A ++ ++ +LE + RRA +++AM
Sbjct: 74 KIEYLLAGRFMCDPKNFNIWVDKIIKRGLSAEIMVDNLRAKLEEAMPIRRAAYSIIRTAM 133
Query: 143 RFGADGVKVIASGRLNGAELSRTECYLEGR--VPLQTLRAHIDYGTAVAETAYGSCGIKV 200
R GA G +VI +G+L A+ +R + EG R + T + G G+KV
Sbjct: 134 RAGAAGCEVIVAGKLR-AQRARANKFKEGCLISTGHPKRIFLAEATRHIKMRQGVIGVKV 192
Query: 201 YVS----LRDEVSDSDSTIPAAEHR 221
+ + D + +
Sbjct: 193 RIYNPNIRGAVMPDKIEIGAFSRQK 217
>gi|50427849|ref|XP_462537.1| DEHA2G22770p [Debaryomyces hansenii CBS767]
gi|49658207|emb|CAG91047.1| DEHA2G22770p [Debaryomyces hansenii]
Length = 239
Score = 91.2 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 83/186 (44%), Gaps = 13/186 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ L + G A + + +T +IV ++ ++G++G
Sbjct: 14 ADGVFYAEL-------NEFFTRELAEQGYAGVEVRKTPTKLEVIVKASNTQGVLGEQGRR 66
Query: 84 IEKIRK---KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ K ++ I + V + ++A + A+++ +L + RRA ++
Sbjct: 67 IHELTSLICKRFKISQEGIVIYAERVEERGLSAAVQAEALKSKLLNGLPLRRAAYGVLRF 126
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
AM GA GV+V+ SG+L A ++++ Y +G + Q + ID G GI
Sbjct: 127 AMGAGAKGVEVVISGKLRAA-RAKSQKYADGFMIHSGQPTKDFIDIAIRHVLMRQGVLGI 185
Query: 199 KVYVSL 204
KV +
Sbjct: 186 KVKIMK 191
>gi|156553282|ref|XP_001599651.1| PREDICTED: similar to ribosomal protein S3e [Nasonia vitripennis]
Length = 242
Score = 91.2 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/191 (20%), Positives = 86/191 (45%), Gaps = 6/191 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E+L L + G + + + T + II+ + ++G+KG I ++ +K N +
Sbjct: 24 EFLTRELAEDGYSGVEVRVTPQRTEIILMATHTQSVLGEKGRRIRELTSVVQKRFNFKDH 83
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 84 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 143
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
G + +++ +++G + + +++ T G GIKV + L + + +
Sbjct: 144 RG-QRAKSMKFVDGLMIHSGEPTNDYVNTATRHVLLRQGVLGIKVKIMLPWDPNGKNGPK 202
Query: 216 PAAEHRVVEKD 226
V+ ++
Sbjct: 203 KPLPDNVIVQE 213
>gi|215260017|gb|ACJ64493.1| 40S ribosomal protein S3 [Culex tarsalis]
Length = 221
Score = 91.2 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 72/173 (41%), Gaps = 10/173 (5%)
Query: 51 GVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVP 107
G + + + T II+ + R ++G+KG I ++ + + L +V
Sbjct: 4 GYSGVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRELTAVVQKRFGFAPGTVELYAEKVA 63
Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTEC 167
+ A A+S+ +L + RRA ++ M GA G +V+ SG+L G + +++
Sbjct: 64 TRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG-QCAKSMK 122
Query: 168 YLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDSDST 214
+++G + ++D T G GIKV + L ++
Sbjct: 123 FVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKVKIMLPWDPNGKIGPKKPL 175
>gi|225714094|gb|ACO12893.1| 40S ribosomal protein S3 [Lepeophtheirus salmonis]
Length = 237
Score = 91.2 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/212 (18%), Positives = 84/212 (39%), Gaps = 26/212 (12%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E+L L + G + + + II+ + R ++G KG I ++ +K + +
Sbjct: 23 EFLTRELAEDGYSGVEVHVAPLRTEIIIMATRTQNVLGDKGRRIRELTSVVQKRFSFPEN 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVAARGLCAIAQAESLRYKLIGGLAVRRACYGVLRYIMESGARGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR---------- 205
G + +++ +++G + ++D G GIKV + L
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPCNDYVDTACRHVLLRQGVLGIKVKIMLPFDVTGKSGPR 201
Query: 206 ----------DEVSDSDSTIPAAEHRVVEKDS 227
+ + P +E + + ++
Sbjct: 202 KPLPDTVSVAEPKEEDIPANPFSEPKAAKPEA 233
>gi|110225654|ref|YP_665660.1| ribosomal protein S3 [Nephroselmis olivacea]
gi|6066169|gb|AAF03187.1|AF110138_19 ribosomal protein S3 [Nephroselmis olivacea]
Length = 309
Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 65/130 (50%), Gaps = 7/130 (5%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERR----VVFRRAMK 135
K + ++++ ++ + + + + +A + I QLE++ ++ + MK
Sbjct: 183 KDSFLQQVESSINKNVDCSTQVFLMKSSNSLSSANFFVKEITYQLEKKSSINQIWNQVMK 242
Query: 136 RAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGS 195
+ +Q G+++ +GR+NG E++RTE G+ L +L +DY + A T +G
Sbjct: 243 KVIQ---TPSIQGIRLSVAGRINGVEMARTEIRKYGQTSLHSLSNKMDYACSHAYTPFGI 299
Query: 196 CGIKVYVSLR 205
G+K+++ R
Sbjct: 300 LGVKIWICFR 309
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/168 (16%), Positives = 51/168 (30%), Gaps = 7/168 (4%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR---GSEYGALLHEDLKIREYLQCHLKQAGVAKILI 57
MGQK+NPI RL +N + + WF+ LH I E + + + +
Sbjct: 1 MGQKVNPISLRLPINRSVDCLWFSDIHSTKLMIQYLHFHKYI-ESIFQVTSHLNMGRFFL 59
Query: 58 ERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117
+ K + +I K ++K N+ +
Sbjct: 60 DVFPKKWTLSCLVHERKNLISKGTRFLKKSAFFNKNVHPLGLTNLN---SAGVFAIAYQQ 116
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRT 165
I +L R + A+QS ++ + G +
Sbjct: 117 MYIQSKLSRIYSPQLFFLSALQSFLQHNYKVASLCLESTNQGKQRKNF 164
>gi|68490130|ref|XP_711114.1| likely cytosolic ribosomal protein S3 [Candida albicans SC5314]
gi|68490165|ref|XP_711097.1| likely cytosolic ribosomal protein S3 [Candida albicans SC5314]
gi|46432373|gb|EAK91858.1| likely cytosolic ribosomal protein S3 [Candida albicans SC5314]
gi|46432391|gb|EAK91875.1| likely cytosolic ribosomal protein S3 [Candida albicans SC5314]
gi|238879938|gb|EEQ43576.1| 40S ribosomal protein S3 [Candida albicans WO-1]
Length = 251
Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 45/186 (24%), Positives = 83/186 (44%), Gaps = 13/186 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ L + G A + + +T +IV ++ ++G++G
Sbjct: 14 ADGVFYAEL-------NEFFTRELAEQGYAGVEVRKTPSKLEVIVKASNTQGVLGEQGRR 66
Query: 84 IEKIRK---KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ K ++ I + V + ++A + A+++ +L + RRA ++
Sbjct: 67 IHELTSLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEALKAKLLSGLPIRRAAYGVLRF 126
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
AM GA GV+V+ SG+L A ++++ Y +G + Q R ID G GI
Sbjct: 127 AMGAGAKGVEVVISGKLRAA-RAKSQKYADGFMIHSGQPTRDFIDIAIRHVLMRQGVLGI 185
Query: 199 KVYVSL 204
KV +
Sbjct: 186 KVKIMK 191
>gi|18312873|ref|NP_559540.1| 30S ribosomal protein S3P [Pyrobaculum aerophilum str. IM2]
gi|18160363|gb|AAL63722.1| ribosomal protein S3 [Pyrobaculum aerophilum str. IM2]
Length = 196
Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 51/197 (25%), Positives = 90/197 (45%), Gaps = 8/197 (4%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKG---TDIEKIRKKLSNM 94
I+E+L+ L + G I +T RI++Y+ RP IIG+KG +I I +
Sbjct: 1 MIKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVKEISNILTTKLGV 60
Query: 95 TNSEIH-LSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIA 153
N +I + ++++ PE+ ++A IA + + V FRR M A++ M GA G +++
Sbjct: 61 ENPQIDVIDISKIEAPEMFPKVVAYRIANAMAKGVRFRRVMFVAIRQLMEAGAKGFEIVV 120
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
SG+L+ E +R E G++ A + G GI+V ++
Sbjct: 121 SGKLS-TERARFEKQTYGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIEVRIAPATLQYSD 179
Query: 212 D-STIPAAEHRVVEKDS 227
+ P V++ S
Sbjct: 180 EYKIKPPVRPEAVQQQS 196
>gi|307207014|gb|EFN84837.1| 40S ribosomal protein S3 [Harpegnathos saltator]
Length = 242
Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 38/171 (22%), Positives = 76/171 (44%), Gaps = 7/171 (4%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---- 96
E+L L + G + + + T II+ + ++G+KG I ++ + N
Sbjct: 24 EFLTRELAEDGYSGVEVRVTPNRTEIILLATHTQSVLGEKGRRIRELTSVVQKRFNFKEP 83
Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+
Sbjct: 84 QNVELYAEKVAVRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGK 143
Query: 157 LNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
L G + +++ +++G + + +++ T G GIKV + L
Sbjct: 144 LRG-QRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLGIKVKIMLP 193
>gi|297527401|ref|YP_003669425.1| ribosomal protein S3 [Staphylothermus hellenicus DSM 12710]
gi|297256317|gb|ADI32526.1| ribosomal protein S3 [Staphylothermus hellenicus DSM 12710]
Length = 225
Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 48/201 (23%), Positives = 95/201 (47%), Gaps = 4/201 (1%)
Query: 26 GSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIE 85
S + + + + E+L + K AG A + + +T R+I+Y+ PG +IG+ G+ I
Sbjct: 7 KSYFIDYSLKKVMLDEFLANYFKDAGYAGMELYKTPTGYRVIIYAEYPGRVIGRGGSIIR 66
Query: 86 KIRKKLSNMTN-SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRF 144
K+ + ++++V+ VP P++NA ++A I + LE+ + +RR ++ M
Sbjct: 67 KLMTIMQTHFGLENVNITVSPVPDPDLNARVVAFRIVRALEKEIPYRRVAMAMLRRIMEA 126
Query: 145 GADGVKVIASGRLNGAELSRTECYLEGRVPLQT--LRAHIDYGTAVAETAYGSCGIKVYV 202
GA G ++I SG+L +E +R + GR+ + +D A G G++V +
Sbjct: 127 GAVGAEIIISGKLR-SERARYQKLKAGRIYKAGDMVDYVVDRAVGKALLKRGVYGVEVVI 185
Query: 203 SLRDEVSDSDSTIPAAEHRVV 223
I + + +
Sbjct: 186 VRPHLKPPDYVEIKSVKPEEL 206
>gi|126132980|ref|XP_001383015.1| hypothetical protein PICST_82366 [Scheffersomyces stipitis CBS
6054]
gi|126094840|gb|ABN64986.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 242
Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 82/186 (44%), Gaps = 13/186 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ L + G A + + +T +IV ++ ++G++G
Sbjct: 14 ADGVFYAEL-------NEFFTRELAEQGYAGVEVRKTPTKLEVIVKASNTQGVLGEQGRR 66
Query: 84 IEKIRK---KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ K ++ I + V + ++A + A+ + +L + RRA ++
Sbjct: 67 IHELTSLLVKRFKLSPEGIVIYAERVEERGLSAAVQAEGLKAKLLSGLPIRRAAYGVLRF 126
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
AM GA GV+V+ SG+L A ++++ Y +G + Q + ID G GI
Sbjct: 127 AMGAGAKGVEVVISGKLRAA-RAKSQKYSDGFMIHSGQPTKDFIDIAIRHVLMRQGVLGI 185
Query: 199 KVYVSL 204
KV +
Sbjct: 186 KVKIMK 191
>gi|288191116|gb|ADC43911.1| ribosomal protein S3 [Pangium edule]
Length = 478
Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 45/164 (27%), Positives = 78/164 (47%), Gaps = 5/164 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 316 KVMELIEKFINLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 374
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + ++ M+ G +G+++
Sbjct: 375 NTLIESVKIQSVYQSASPIAQDISFQLRNKTRSFRSIFSKIIKDIPLVMKKGVEGIRICC 434
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197
SGRL GAE++RTEC G+ IDY A T YG G
Sbjct: 435 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGILG 478
>gi|17136324|ref|NP_476632.1| ribosomal protein S3 [Drosophila melanogaster]
gi|548856|sp|Q06559|RS3_DROME RecName: Full=40S ribosomal protein S3
gi|290275|gb|AAA28875.1| ribosomal protein S3/AP endonuclease DNA repair protein [Drosophila
melanogaster]
gi|7300992|gb|AAF56129.1| ribosomal protein S3 [Drosophila melanogaster]
gi|21430306|gb|AAM50831.1| LD47488p [Drosophila melanogaster]
gi|220950134|gb|ACL87610.1| RpS3-PA [synthetic construct]
gi|220959146|gb|ACL92116.1| RpS3-PA [synthetic construct]
Length = 246
Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 42/190 (22%), Positives = 79/190 (41%), Gaps = 13/190 (6%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + + ++G+KG I ++ + N
Sbjct: 25 EFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETG 84
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
I L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 85 RIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKGCEVVVSGKL 144
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
G + +++ +++G + + + DY T G GIKV V D
Sbjct: 145 RG-QRAKSMKFVDGLM-IHSGDPCNDYVETATRHVLLRQGVLGIKVKVM-----LPYDPK 197
Query: 215 IPAAEHRVVE 224
+ +
Sbjct: 198 NKIGPKKPLP 207
>gi|189308068|gb|ACD86918.1| ribosomal protein S3 [Caenorhabditis brenneri]
Length = 205
Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 74/170 (43%), Gaps = 6/170 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
+L L + G + + + T +I+ + R ++G++G I+++ +
Sbjct: 25 NFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNVLGERGRRIKELTSVVQKRFGFEEG 84
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A +S+ +L + RRA ++ M GA GV+VI SG+L
Sbjct: 85 SVELYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYGVLRFIMESGAQGVEVIVSGKL 144
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
G + ++ +++G + + +I + G GIKV + L
Sbjct: 145 RG-QRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQGVIGIKVKIMLP 193
>gi|321464706|gb|EFX75712.1| hypothetical protein DAPPUDRAFT_306633 [Daphnia pulex]
Length = 242
Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 37/188 (19%), Positives = 75/188 (39%), Gaps = 11/188 (5%)
Query: 42 YLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SE 98
+L L + G + + + II+ + R ++G+KG I ++ +
Sbjct: 25 FLTRELAEDGYSGVEVRLAPTRTEIIILATRTQNVLGEKGRRIRELTSVVQKRFGFQEGT 84
Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLN 158
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 85 VELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLR 144
Query: 159 GAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIP 216
G + +++ +++G + + ++D G GIKV + D
Sbjct: 145 G-QRAKSMKFVDGLMIHSGEPTNVYVDTAVRHVLLRQGVLGIKVKIM-----LPWDPNNK 198
Query: 217 AAEHRVVE 224
R +
Sbjct: 199 NGPKRPLP 206
>gi|145591005|ref|YP_001153007.1| 30S ribosomal protein S3P [Pyrobaculum arsenaticum DSM 13514]
gi|145282773|gb|ABP50355.1| SSU ribosomal protein S3P [Pyrobaculum arsenaticum DSM 13514]
Length = 222
Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 51/183 (27%), Positives = 88/183 (48%), Gaps = 10/183 (5%)
Query: 29 YGALLHEDLK---IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKG---T 82
Y +L E+ K I+E+L+ L + G I +T RI++Y+ RP IIG+KG
Sbjct: 13 YKKILEENKKKWMIKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVK 72
Query: 83 DIEKIRKKLSNMTNSEIH-LSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSA 141
++ I + N +I + V+++ PE+ ++A IA + + V FRR M A++
Sbjct: 73 EVSNILATKLGVENPQIDVIDVSKIEAPEMFPKVVAYRIANAMAKGVRFRRVMFAAIRQL 132
Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIK 199
GA G +++ SG+L+ E +R E G++ A + G GI+
Sbjct: 133 TEAGAKGFEIVVSGKLS-TERARFEKQTFGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIE 191
Query: 200 VYV 202
V +
Sbjct: 192 VRI 194
>gi|66800843|ref|XP_629347.1| 40S ribosomal protein S3 [Dictyostelium discoideum AX4]
gi|74834663|sp|P90526|RS3_DICDI RecName: Full=40S ribosomal protein S3
gi|1688320|gb|AAB36959.1| RpgG [Dictyostelium discoideum]
gi|60462650|gb|EAL60852.1| 40S ribosomal protein S3 [Dictyostelium discoideum AX4]
Length = 218
Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 74/169 (43%), Gaps = 6/169 (3%)
Query: 42 YLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SE 98
+ + K G + + ++ + II+ +++ ++G I+++ + N
Sbjct: 27 FTREFNKDEGYSGVELKTSPGLTEIIIRASKTQAVVGPNARRIQELCSLVQKRFNFKEGT 86
Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLN 158
+ L ++ + A A+S+ +L + R+A V M GA G +VI SG+L
Sbjct: 87 VVLFAEKILNRGLCAVAQAESLKLKLLAGLPVRKACYAIVHQIMTRGAKGCEVIVSGKLR 146
Query: 159 GAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
A+ +++ + +G + Q + ID+ G+ G+KV + L
Sbjct: 147 -AQRAKSMKFRDGYMIKSGQPSKDFIDFACRHVLLRQGTLGVKVAIMLP 194
>gi|172046048|sp|A4WIY8|RS3_PYRAR RecName: Full=30S ribosomal protein S3P
Length = 220
Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 51/183 (27%), Positives = 88/183 (48%), Gaps = 10/183 (5%)
Query: 29 YGALLHEDLK---IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKG---T 82
Y +L E+ K I+E+L+ L + G I +T RI++Y+ RP IIG+KG
Sbjct: 11 YKKILEENKKKWMIKEFLEYRLSKYGYIDSEILKTPLGTRIVIYAERPSRIIGRKGAIVK 70
Query: 83 DIEKIRKKLSNMTNSEIH-LSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSA 141
++ I + N +I + V+++ PE+ ++A IA + + V FRR M A++
Sbjct: 71 EVSNILATKLGVENPQIDVIDVSKIEAPEMFPKVVAYRIANAMAKGVRFRRVMFAAIRQL 130
Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIK 199
GA G +++ SG+L+ E +R E G++ A + G GI+
Sbjct: 131 TEAGAKGFEIVVSGKLS-TERARFEKQTFGKLYKIGYDAKNRVRRAVVHVLLKPGIYGIE 189
Query: 200 VYV 202
V +
Sbjct: 190 VRI 192
>gi|302748842|gb|ADL63901.1| ribosomal protein S3 [Lilium sp. Qiu 96072]
Length = 466
Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 50/172 (29%), Positives = 79/172 (45%), Gaps = 7/172 (4%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E + + G+ + LI+ II+ + R ++ K+R LSN TN+
Sbjct: 296 KVMELIDKFIDLGGI-RELIKGIEIMIEIILRNIRIPYGYNSYLNEVHKMRSFLSNRTNT 354
Query: 98 EIH--LSVNEVPKPEINATLIAQSIAQQLER-RVVFRRAMKRAVQSA---MRFGADGVKV 151
+ ++ +A+LIAQ I+ Q + F + V+ M G G+++
Sbjct: 355 SFGPLIESVKIKSVYQSASLIAQDISFQPRNNKRSFHSIFSQIVKDIPFIMPKGVPGIRI 414
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
SGRL GAE++RTEC G+ IDY A T YG G+KV +S
Sbjct: 415 CCSGRLGGAEIARTECGKFGKTSRNVFNHKIDYAPAEVSTRYGISGVKVRIS 466
>gi|302748865|gb|ADL63912.1| ribosomal protein S3 [Marcgravia rectiflora]
Length = 474
Score = 90.4 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 9/168 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ I + + G +++K+R LSN
Sbjct: 310 KVMELIEKFIDLGGIGEL---IKGIEMMIEIILRNRTIPYGYNYYLNEVKKMRSLLSNRA 366
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKV 151
+ + ++ +A+ IAQ I+ Q + FR + +Q M+ G +G+++
Sbjct: 367 KTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKNIQLVMKKGVEGIRI 426
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIK 199
SGR GAE++RTEC G+ IDY A T YG G+K
Sbjct: 427 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGXSGVK 474
>gi|255590603|ref|XP_002535312.1| 60S ribosomal protein L16, putative [Ricinus communis]
gi|223523477|gb|EEF27073.1| 60S ribosomal protein L16, putative [Ricinus communis]
Length = 668
Score = 90.4 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 47/164 (28%), Positives = 79/164 (48%), Gaps = 5/164 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 377 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 435
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 436 NTLIESIKMKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 495
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197
SGRL GAE++RTEC G+ IDY A T YG G
Sbjct: 496 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISG 539
>gi|241958636|ref|XP_002422037.1| ribosomal protein, small subunit, putative [Candida dubliniensis
CD36]
gi|223645382|emb|CAX40038.1| ribosomal protein, small subunit, putative [Candida dubliniensis
CD36]
Length = 254
Score = 90.4 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/186 (24%), Positives = 83/186 (44%), Gaps = 13/186 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ L + G A + + +T +IV ++ ++G++G
Sbjct: 14 ADGVFYAEL-------NEFFTRELAEQGYAGVEVRKTPSKLEVIVKASNTQGVLGEQGRR 66
Query: 84 IEKIRK---KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ K ++ I + V + ++A + A+++ +L + RRA ++
Sbjct: 67 IHELTSLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEALKAKLLSGLPIRRAAYGVLRF 126
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
AM GA GV+V+ SG+L A ++++ Y +G + Q R ID G GI
Sbjct: 127 AMGAGAKGVEVVISGKLRAA-RAKSQKYADGFMIHSGQPTRDFIDIAIRHVLMRQGVLGI 185
Query: 199 KVYVSL 204
KV +
Sbjct: 186 KVKIMK 191
>gi|85857570|gb|ABC86320.1| IP15838p [Drosophila melanogaster]
Length = 253
Score = 90.4 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 42/190 (22%), Positives = 79/190 (41%), Gaps = 13/190 (6%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + + ++G+KG I ++ + N
Sbjct: 32 EFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETG 91
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
I L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 92 RIELYAEKVAARGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKGCEVVVSGKL 151
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
G + +++ +++G + + + DY T G GIKV V D
Sbjct: 152 RG-QRAKSMKFVDGLM-IHSGDPCNDYVETATRHVLLRQGVLGIKVKVM-----LPYDPK 204
Query: 215 IPAAEHRVVE 224
+ +
Sbjct: 205 NKIGPKKPLP 214
>gi|66504343|ref|XP_623731.1| PREDICTED: 40S ribosomal protein S3 [Apis mellifera]
Length = 242
Score = 90.4 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/185 (22%), Positives = 78/185 (42%), Gaps = 9/185 (4%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---- 96
E+L L + G + + + T II+ + ++G+KG I ++ + N
Sbjct: 24 EFLTRELSEDGYSGVEVRVTPHRTEIILLATHTQSVLGEKGRRIRELTSVVQKRFNFKET 83
Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGR 156
I L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+
Sbjct: 84 QNIELYAEKVATRGLCAIAQAESLRFKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGK 143
Query: 157 LNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
L G + +++ +++G + + +++ T G GIKV + L T
Sbjct: 144 LRG-QRAKSMKFVDGLMIHSGEPTNEYVNTATRHVLLRQGVLGIKVKIMLP--YDPHGKT 200
Query: 215 IPAAE 219
P
Sbjct: 201 GPKKP 205
>gi|194910452|ref|XP_001982149.1| GG11202 [Drosophila erecta]
gi|190656787|gb|EDV54019.1| GG11202 [Drosophila erecta]
Length = 246
Score = 90.4 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 43/190 (22%), Positives = 79/190 (41%), Gaps = 13/190 (6%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + + ++G+KG I ++ + N
Sbjct: 25 EFLTRELAEDGYSGVEVRVTPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETG 84
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
I L +V I A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 85 RIELYAEKVATRGICAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKGCEVVVSGKL 144
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
G + +++ +++G + + + DY T G GIKV V D
Sbjct: 145 RG-QRAKSMKFVDGLM-IHSGDPCNDYVETATRHVLLRQGVLGIKVKVM-----LPYDPK 197
Query: 215 IPAAEHRVVE 224
+ +
Sbjct: 198 NKIGPKKPLP 207
>gi|302748577|gb|ADL63769.1| ribosomal protein S3 [Berberidopsis beckleri]
Length = 468
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 5/162 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 308 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 366
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + +Q M+ G +G+++
Sbjct: 367 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIQLVMKKGVEGIRICC 426
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGS 195
SGR GAE++RTEC G+ P IDY A T YG
Sbjct: 427 SGRSKGAEIARTECGKYGKTPRNVFNQKIDYAPAEVSTRYGI 468
>gi|328867452|gb|EGG15834.1| 40S ribosomal protein S3 [Dictyostelium fasciculatum]
Length = 219
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 31/169 (18%), Positives = 73/169 (43%), Gaps = 6/169 (3%)
Query: 42 YLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SE 98
+ + K G + + +++ + I + +++ I+G+ + ++ +
Sbjct: 28 FTREFNKDEGYSGVELKQGPASTEITIRASKTQAIVGENARRVHELCSLVQKRFGFKEGA 87
Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLN 158
+ + +V + A A+S+ +L + RRA + M GA G +VI SG+L
Sbjct: 88 VTIFAEKVQNRGLCAVAQAESLKIKLLAGLPVRRACYAILHQVMTKGAKGCEVIVSGKLR 147
Query: 159 GAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
A+ +++ + +G + Q + +D+ G+ G+KV + L
Sbjct: 148 -AQRAKSMKFRDGYMIKSGQPSQQFVDFAVRHVLLRQGTLGVKVAIMLP 195
>gi|316974969|gb|EFV58434.1| 40S ribosomal protein S3-A [Trichinella spiralis]
Length = 330
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/189 (19%), Positives = 77/189 (40%), Gaps = 9/189 (4%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN-SEI 99
+ L + G + + + +T + II+ + R ++G+KG I ++ + N E
Sbjct: 117 NFFMRELAEDGYSGVEVRKTPRKTEIIIMATRTQNVLGEKGRRIRELTSLVQKRFNLPEE 176
Query: 100 HLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNG 159
L +V + + A +S+ +L + RRA ++ M A G +VI SG+L G
Sbjct: 177 SLYAEKVAQRGLCAIAQCESLRFKLIGGLPVRRACYGILRYIMESQAKGCEVIVSGKLRG 236
Query: 160 AELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
+ +++ +++G + +++ G G GIKV + D
Sbjct: 237 -QRAKSMKFVDGLMIHSGDPTNEYVEKGVRHVVLRQGVIGIKVKIM-----LPHDPKGVY 290
Query: 218 AEHRVVEKD 226
+ +
Sbjct: 291 GPKKPLPDS 299
>gi|229315926|ref|YP_002860152.1| ribosomal protein S3 [Micromonas sp. RCC299]
gi|226431211|gb|ACO55616.1| ribosomal protein S3 [Micromonas sp. RCC299]
Length = 319
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 66/165 (40%), Gaps = 3/165 (1%)
Query: 44 QCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSV 103
+ A + K + + + + I L+ T ++ +
Sbjct: 154 RNKTMAAILLKKNRNMYTHKKQFSILNTSEQKTNQIITKYVSHIENVLALYTQKKVVWTP 213
Query: 104 NEVPKPEINATLIAQSIAQQLE--RRVVFRRAMKRAV-QSAMRFGADGVKVIASGRLNGA 160
++ +A+ +A IA Q E ++ FR + + Q G+++ +GR+ GA
Sbjct: 214 YKIKNAFTSASFVAHYIALQFEQNKKKPFRSIFQDVLKQCVKTPQLVGIRIAIAGRIGGA 273
Query: 161 ELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
E++R E G+ L IDY A T +G G+KV++S +
Sbjct: 274 EMARVEQTQYGQTSLHVFSHTIDYHATSAYTPHGLLGVKVWMSFK 318
Score = 52.7 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 43/107 (40%), Gaps = 3/107 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
M QKI P RL N +++ WF+ YG+LL + L I++++ + G L
Sbjct: 1 MAQKIAPAALRLYTNKKFDASWFSD-RMYGSLLQKTLNIKKFVHSIFESIGTKTALSHVQ 59
Query: 61 HKNCRIIV--YSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNE 105
I + + P ++ + + + E +L+ E
Sbjct: 60 ANPQHIYIQSFFCSPRVMNQRLRKKYVALESNTQFLHPFEAYLTAKE 106
>gi|302748609|gb|ADL63785.1| ribosomal protein S3 [Calyptrotheca somalensis]
Length = 476
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 5/165 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ + ++ + G+ + LI+ II+ + R +++K+R LSN T +
Sbjct: 313 KVMKLIEKFIDLGGI-RELIKGIEMMIEIILKNRRIPYGYNSYLNEVKKMRSFLSNRTKT 371
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLER-RVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q ++ R FR+ + V++ M+ G +G+++
Sbjct: 372 NTKIESKKIKSVYQSASPIAQDISFQPKKKRRSFRKIFSKIVKNIPLVMKKGVEGIRISC 431
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
SGRL GAE++RTEC G+ L IDY +A T YG G+
Sbjct: 432 SGRLEGAEIARTECGKYGKTSCNVLDQKIDYASAEVSTRYGILGV 476
>gi|73987942|ref|XP_860381.1| PREDICTED: similar to 40S ribosomal protein S3 isoform 6 [Canis
familiaris]
Length = 231
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 75/180 (41%), Gaps = 16/180 (8%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIH 100
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFG---- 78
Query: 101 LSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGA 160
P+ + A A+S+ +L + RRA ++ M GA G +V+ SG+L G
Sbjct: 79 -----FPEGSLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG- 132
Query: 161 ELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDSDST 214
+ +++ +++G + + ++D G GIKV + L ++
Sbjct: 133 QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPL 192
>gi|255081971|ref|XP_002508204.1| predicted protein [Micromonas sp. RCC299]
gi|226523480|gb|ACO69462.1| predicted protein [Micromonas sp. RCC299]
Length = 233
Score = 89.7 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 80/186 (43%), Gaps = 13/186 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G + L+E L IRE L + G + + + T II+ + R ++G+KG
Sbjct: 14 ADGVFFAE-LNE-LLIRE-----LAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 66
Query: 84 IEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ + + L +V + A A+S+ +L + RRA ++
Sbjct: 67 IRELTSLVQKRFGFAEGSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 126
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L G + + + +G + +R +I+ G G+
Sbjct: 127 IMENGAKGAEVVVSGKLRG-QRGKAMKFKDGYMISSGNPVREYIESACLHVLLRQGCVGV 185
Query: 199 KVYVSL 204
KV + L
Sbjct: 186 KVKIML 191
>gi|303276783|ref|XP_003057685.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460342|gb|EEH57636.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 232
Score = 89.7 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 13/186 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E L L + G + + + T II+ + R ++G+KG
Sbjct: 13 ADGVFYAEL-------NEMLVRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 65
Query: 84 IEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ + + L +V + A A+S+ +L + RRA ++
Sbjct: 66 IRELTSLVQKRFGFAEGSVELYAEKVANRGLCAIAQAESLRYKLLGGLAVRRACYGVLRF 125
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA G +V+ SG+L G + + + +G + +R +I+ G GI
Sbjct: 126 IMENGAKGCEVVVSGKLRG-QRGKAMKFKDGYMISSGNPVREYIESSVRHVLLRQGCVGI 184
Query: 199 KVYVSL 204
KV + L
Sbjct: 185 KVKIML 190
>gi|302748749|gb|ADL63855.1| ribosomal protein S3 [Galium sp. Qiu 95025]
Length = 459
Score = 89.7 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 46/170 (27%), Positives = 76/170 (44%), Gaps = 10/170 (5%)
Query: 34 HEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKL 91
ED K+ E ++ + + ++ I + + G +++K+R L
Sbjct: 294 KED-KVMELIEKFIDLGRIGEL---LKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLL 349
Query: 92 SNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGAD 147
SN TN+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G +
Sbjct: 350 SNRTNTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFNKIVKDIPLVMKGGVE 409
Query: 148 GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197
GV++ SGRL GAE++RTEC G+ IDY A T YG G
Sbjct: 410 GVRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISG 459
>gi|149238902|ref|XP_001525327.1| 40S ribosomal protein S3 [Lodderomyces elongisporus NRRL YB-4239]
gi|146450820|gb|EDK45076.1| 40S ribosomal protein S3 [Lodderomyces elongisporus NRRL YB-4239]
Length = 247
Score = 89.7 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 44/186 (23%), Positives = 82/186 (44%), Gaps = 13/186 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ L + G A + + +T IIV ++ ++G++G
Sbjct: 14 ADGVFYAEL-------NEFFTRELAEQGYAGVEVRKTPSKLEIIVKASNTQGVLGEQGRR 66
Query: 84 IEKIRK---KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ K ++ I + V + ++A + A+++ +L + RRA ++
Sbjct: 67 IHELTSLIVKRFKLSPEGIAIYAERVEERGLSAAVQAEALKAKLLNGLPIRRAAYGVLRF 126
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
AM GA GV+V+ SG+L A ++++ Y +G + Q ID G G+
Sbjct: 127 AMGAGAKGVEVVISGKLRAA-RAKSQKYADGFMIHSGQPTNDFIDIAIRHVLMRQGVLGV 185
Query: 199 KVYVSL 204
KV +
Sbjct: 186 KVKIMK 191
>gi|163783899|ref|ZP_02178873.1| ribosomal protein S03 [Hydrogenivirga sp. 128-5-R1-1]
gi|159880820|gb|EDP74350.1| ribosomal protein S03 [Hydrogenivirga sp. 128-5-R1-1]
Length = 52
Score = 89.7 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGV 52
MGQK++PI RLG++ W S+W+A Y LHED+KIR +++ + AG+
Sbjct: 1 MGQKVHPIGLRLGISSDWQSKWYADKKNYAKTLHEDIKIRNFIKEKYRAAGI 52
>gi|40643020|emb|CAD91437.1| ribosomal protein S3 [Crassostrea gigas]
Length = 187
Score = 89.7 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 36/165 (21%), Positives = 73/165 (44%), Gaps = 6/165 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
+L L + G + + + T II+ + R ++G+KG I ++ + N
Sbjct: 24 NFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTSVVQKRFNFPEG 83
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + + A +S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 84 TVELYAEKVAQRGLCAIAQCESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 143
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKV 200
G + +++ +++G + + ++D G GIKV
Sbjct: 144 RG-QRAKSMKFVDGLMIHSGDPINDYVDTAVRHVLLRQGVLGIKV 187
>gi|302761842|ref|XP_002964343.1| hypothetical protein SELMODRAFT_438700 [Selaginella moellendorffii]
gi|300168072|gb|EFJ34676.1| hypothetical protein SELMODRAFT_438700 [Selaginella moellendorffii]
Length = 236
Score = 89.7 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/218 (22%), Positives = 87/218 (39%), Gaps = 23/218 (10%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E L L + G + + + T II+ + R ++G+KG
Sbjct: 13 ADGVFYAEL-------NELLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQSVLGEKGRR 65
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRR------AM 134
I ++ +K + S + L +V + A A+S+ +L + RR A
Sbjct: 66 IRELTSVVQKRFSFPESTVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRVLYFVRAC 125
Query: 135 KRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETA 192
++ M GA G +VI SG+L A+ +++ + +G + + ID
Sbjct: 126 YGVLRFIMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGSPVNEFIDRAVRHVLLR 184
Query: 193 YGSCGIKVYVSL----RDEVSDSDSTIPAAEHRVVEKD 226
G GIKV + L + + S +V +++
Sbjct: 185 QGVLGIKVKIMLDWDPKGKTGPSTPLPDMVTIQVPKEE 222
>gi|146420499|ref|XP_001486205.1| hypothetical protein PGUG_01877 [Meyerozyma guilliermondii ATCC
6260]
gi|146389620|gb|EDK37778.1| hypothetical protein PGUG_01877 [Meyerozyma guilliermondii ATCC
6260]
Length = 238
Score = 89.7 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 42/186 (22%), Positives = 82/186 (44%), Gaps = 13/186 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ L + G A + + +T +IV ++ ++G++G
Sbjct: 14 ADGVFYAEL-------NEFFTRELAEQGYAGVEVRKTPSKLEVIVKASNTQGVLGEQGRR 66
Query: 84 IEKIRK---KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ K ++ I + + + ++A + A+++ +L + RRA ++
Sbjct: 67 IHELTSLIVKRFKLSPEGIVIYAERIEERGLSAAVQAEALKSKLLNGLPMRRAAYGVLRF 126
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
AM GA GV+V+ SG+L A ++++ Y +G + Q ID G GI
Sbjct: 127 AMAAGAKGVEVVISGKLRAA-RAKSQKYSDGFMIHSGQPTNDFIDIAIRHVLMRQGVLGI 185
Query: 199 KVYVSL 204
+V +
Sbjct: 186 RVKIMK 191
>gi|133907787|gb|ABO42353.1| ribosomal protein S3 [Androstachys johnsonii]
Length = 467
Score = 89.7 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 308 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 366
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+LIAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 367 NTLIESVKIKSVYQSASLIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 426
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 427 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 467
>gi|126654428|ref|ZP_01726168.1| 30S ribosomal protein S3 [Bacillus sp. B14905]
gi|126589115|gb|EAZ83312.1| 30S ribosomal protein S3 [Bacillus sp. B14905]
Length = 53
Score = 89.7 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAK 54
MGQK++PI R+G+ W S+W+A +Y LLHED+K+R+Y++ LK A V+K
Sbjct: 1 MGQKVHPIGLRVGIIRDWESKWYAE-KDYATLLHEDIKVRKYIETALKDASVSK 53
>gi|330840814|ref|XP_003292404.1| 40S ribosomal protein S3 [Dictyostelium purpureum]
gi|325077360|gb|EGC31078.1| 40S ribosomal protein S3 [Dictyostelium purpureum]
Length = 218
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 74/169 (43%), Gaps = 6/169 (3%)
Query: 42 YLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SE 98
+ + K G + + ++ + II+ +++ ++G I+++ + N
Sbjct: 27 FTREFNKDEGYSGVELKTSPGLTEIIIRASKTQAVVGPNARRIQELCSLVQKRFNFKEGT 86
Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLN 158
+ L ++ + A A+S+ +L + R+A V M GA G +VI SG+L
Sbjct: 87 VVLFAEKILNRGLCAVAQAESLKLKLLAGLPVRKACYAIVHQIMTRGAKGCEVIVSGKLR 146
Query: 159 GAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
A+ +++ + +G + Q + +D+ G+ G+KV + L
Sbjct: 147 -AQRAKSMKFRDGYMIKSGQPSKDFVDFACRHVLLRQGTLGVKVAIMLP 194
>gi|219114717|ref|XP_002178154.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409889|gb|EEC49819.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 253
Score = 89.3 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 40/212 (18%), Positives = 78/212 (36%), Gaps = 17/212 (8%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E L L + G A + + T +I+ + R ++G+
Sbjct: 9 ADGVFYAEL-------NELLTAELAEEGYAGVEVRTTPHRTELIIRATRTQNVLGENNRR 61
Query: 84 IEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ + N + L V + A A+S+ +L + RRA V+
Sbjct: 62 IRELTSVVQKRFNFADGAVELYAERVQNRGLCAQAQAESLKFKLLGGLAVRRACYGVVRF 121
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M A G +V+ +G+L G + ++ + +G + + + D G GI
Sbjct: 122 VMEAQAKGCEVVVTGKLRG-QRAKGMKFGDGYMIKTGHAGQVYTDSAVRHVLMRQGVIGI 180
Query: 199 KVYVSL----RDEVSDSDSTIPAAEHRVVEKD 226
KV + L + ++ +++
Sbjct: 181 KVSIMLPQDPKGQMGPKIPLDDVVTILEPKEE 212
>gi|33322140|gb|AAQ06790.1|AF496131_1 30s ribosomal protein S3 [Lactobacillus delbrueckii subsp. lactis]
Length = 71
Score = 89.3 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
+GRLNGA+++R E + EG VPL TLRA IDY A T YG G+KV+++ + + +
Sbjct: 1 AGRLNGADIARREWHTEGSVPLHTLRADIDYAWVNAFTTYGEIGVKVWINRGEILPGRKN 60
Query: 214 TIPAAEHRVVEK 225
PA + +K
Sbjct: 61 Q-PAKRSKGGKK 71
>gi|302748587|gb|ADL63774.1| ribosomal protein S3 [Bougainvillea alba]
Length = 468
Score = 89.3 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 5/163 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ + ++ + G+ + LI+ II+ + R +++K+R LSN TN+
Sbjct: 307 KVMKLIEKFIDLGGI-RELIKGIEMMIEIILKNRRIPYGYNSYLNEVKKMRSLLSNRTNT 365
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + +R FR + V++ M+ G +G+++
Sbjct: 366 NTLIESVKIKSVYQSASPIAQDISFQPKNKRRSFRSIFSKIVKNIPLVMKKGVEGIRICC 425
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196
SGRL GAE++RTEC G+ L IDY +A T YG
Sbjct: 426 SGRLEGAEIARTECRKYGKTSCNVLHKKIDYASAEVSTRYGIL 468
>gi|148684443|gb|EDL16390.1| ribosomal protein S3, isoform CRA_e [Mus musculus]
Length = 243
Score = 89.3 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 77/183 (42%), Gaps = 10/183 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ +++G + + ++D + GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHPSVPFSVLGIKVKIMLPWDPSGKIGPK 201
Query: 212 DST 214
Sbjct: 202 KPL 204
>gi|272716661|gb|ACZ95645.1| ribosomal protein S3 [Welwitschia mirabilis]
Length = 744
Score = 88.9 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 47/165 (28%), Positives = 70/165 (42%), Gaps = 20/165 (12%)
Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINA 113
++I KN RI P K + L N TN+ + ++P +A
Sbjct: 575 GMMIWSLLKNRRI------PYGYNYYNNEVRYKRVQMLCNRTNTSYFIGSVKIPYNYQSA 628
Query: 114 TLIAQSIAQQLERRVVFR----------RAMKRAVQSAMRFGADGVKVIASGRLNGAELS 163
+LIAQ I+ QL R R R + V + G+++ SGRL GAE++
Sbjct: 629 SLIAQDISNQLRGRNRTRSFRSLVSYLVRFVPVRVNPSASVRVRGIRICCSGRLKGAEIA 688
Query: 164 RTECYLEGRV--PLQTLRAH--IDYGTAVAETAYGSCGIKVYVSL 204
TEC G+ P R ID+ + T YG G+KV++S
Sbjct: 689 YTECGEYGKTSAPSSIYRREGVIDHASVHVSTRYGIYGVKVWISY 733
>gi|291389681|ref|XP_002711316.1| PREDICTED: ribosomal protein S3-like [Oryctolagus cuniculus]
Length = 286
Score = 88.9 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 6/170 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 66 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTVVVQTRFGFPEG 125
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ QL + RRA ++ M GA G +V+ SG+L
Sbjct: 126 SVELYAEKVAMRGLCAIAQAESLRYQLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 185
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
G + +++ ++ G V + + D G GIKV + L
Sbjct: 186 RG-QRAQSMKFVGGLVIHSGDPVNYYSDTAVRHVLLRQGVLGIKVKLMLP 234
>gi|133907905|gb|ABO42412.1| ribosomal protein S3 [Petalostigma pubescens]
Length = 481
Score = 88.9 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 322 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 380
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQ---SAMRFGADGVKVIA 153
+ ++ +A+LIAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 381 NTLIESVKIQSVYQSASLIAQDISFQLRNKTRSFRSIFTKIVKDACRVMKKGVEGIRICC 440
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 441 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 481
>gi|328541176|gb|AEB21812.1| ribosomal protein S3 [Arachniopsis major]
Length = 375
Score = 88.9 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 65/125 (52%), Gaps = 1/125 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 251 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 310
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNG+E+++TEC G L IDY YG G+
Sbjct: 311 RIKKCPYVKGIRIGCSGRLNGSEIAKTECRKCGETSLHVFSDQIDYAKTXXXXPYGILGV 370
Query: 199 KVYVS 203
K++VS
Sbjct: 371 KLWVS 375
>gi|302748846|gb|ADL63903.1| ribosomal protein S3 [Goniolimon tataricum]
Length = 467
Score = 88.9 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 5/163 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ ++++ + G+ + LI+ II+ R +++K+R LSN TN+
Sbjct: 306 KVMKWIEKFIDLGGI-RELIKGIEMMIEIILKKKRIPYRYNSYLNEVKKMRSLLSNRTNT 364
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + +R FR + V+ M+ G +G+++
Sbjct: 365 NTLIESVKIKSVYQSASPIAQDISFQPKNKRRSFRSIFSQIVKYIPLGMKKGVEGIRICC 424
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196
SGRL GAE++RTEC G+ IDY +A T YG
Sbjct: 425 SGRLQGAEIARTECGKYGKTSCNVFNQKIDYASAEVSTRYGIL 467
>gi|226482836|emb|CAX79385.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 88.9 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 80/189 (42%), Gaps = 11/189 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E+L+ L G + + + K +I+ + + ++G+ I ++ +K N
Sbjct: 25 EFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGSRRIRELTSVLQKRFGFPNG 84
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L ++ ++A A+S+ +L + R+A ++ M GA G +VI SG++
Sbjct: 85 TLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGILRFIMESGARGAEVIVSGKI 144
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
G + ++ + +G + + ++D + G GIKV + D DS+
Sbjct: 145 KG-QRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQGILGIKVKIM-----MDHDSSG 198
Query: 216 PAAEHRVVE 224
+ +
Sbjct: 199 KKGPRKPLP 207
>gi|130076570|gb|ABO31943.1| ribosomal protein S3 [Haloragis erecta]
Length = 468
Score = 88.9 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 5/162 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 307 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 365
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+LIAQ I+ Q ++ FR + V+ M+ G +G+++
Sbjct: 366 NTLIESVKIASVYQSASLIAQDISFQPRKKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 425
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGS 195
SGRL GAE++RTEC G+ P IDY A T YG
Sbjct: 426 SGRLKGAEIARTECGKYGKTPRNVFNQKIDYAPAEVSTRYGI 467
>gi|164658119|ref|XP_001730185.1| hypothetical protein MGL_2567 [Malassezia globosa CBS 7966]
gi|159104080|gb|EDP42971.1| hypothetical protein MGL_2567 [Malassezia globosa CBS 7966]
Length = 264
Score = 88.9 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 34/170 (20%), Positives = 70/170 (41%), Gaps = 6/170 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E+ L G + L+ H II+ + ++G KG + ++ ++
Sbjct: 24 EFFTRELAAEGYSGCLVRVNHVRTEIIIRATHTQEVLGDKGRRLRELTTLVRQRFRFPEG 83
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V ++A +S+ +L + RRA ++ M GA G +V+ SG++
Sbjct: 84 SLELYAEKVANRGLHAVAQCESLRNKLLGGLPVRRAAYGVLRYVMESGAKGCEVVISGKV 143
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
GA +++ + +G + Q + +D G G+KV +
Sbjct: 144 RGA-RAKSMKFNDGFMIHTGQPAKDFVDVAIRHVLMKQGVLGLKVKIMHG 192
>gi|288191263|gb|ADC43984.1| ribosomal protein S3 [Rourea minor]
Length = 269
Score = 88.9 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 46/164 (28%), Positives = 78/164 (47%), Gaps = 5/164 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 107 KVMELIEKLINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 165
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 166 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 225
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197
SGR GAE++RTEC G+ IDY A T YG G
Sbjct: 226 SGRSEGAEIARTECGKYGKTSRNLFNQKIDYAPAEVSTRYGISG 269
>gi|288191247|gb|ADC43976.1| ribosomal protein S3 [Poliothyrsis sinensis]
Length = 490
Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 6/138 (4%)
Query: 66 IIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQ 123
I + + + G +++K+R LSN TN+ + ++ +A+LIAQ I+ Q
Sbjct: 353 IEIILRKRRIPYGYNSYLNEMKKMRSLLSNRTNTNTLIESIKIQSVYQSASLIAQDISFQ 412
Query: 124 LE-RRVVFRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
L +R FR + V+ M +G+++ SGRL GAE++RTEC G+
Sbjct: 413 LRNKRRSFRSIFSKIVKDLSFLMNKWVEGIRICCSGRLKGAEIARTECGKYGKTSCNVFN 472
Query: 180 AHIDYGTAVAETAYGSCG 197
+DY A T YG G
Sbjct: 473 QKMDYAPAEVSTRYGISG 490
>gi|302749111|gb|ADL64035.1| ribosomal protein S3 [Viburnum sp. Qiu 95083]
Length = 468
Score = 88.5 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 5/164 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 306 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYFNEVKKMRSLLSNRTNT 364
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++
Sbjct: 365 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 424
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197
SGR GAE++RTEC G+ IDY A T YG G
Sbjct: 425 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISG 468
>gi|133907797|gb|ABO42358.1| ribosomal protein S3 [Bergia pedicellaris]
Length = 466
Score = 88.5 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN T +
Sbjct: 307 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYRYNSYLNEMKKMRSLLSNRTKT 365
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQL-ERRVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+LIAQ I+ QL +++ FR + V+ M+ G +G+++
Sbjct: 366 NTLIKSIKIQSVYQSASLIAQDISFQLRKKKRSFRSIFNKIVRDIPLVMKKGVEGIRICC 425
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGR GAE++RTEC G+ IDY A T YG
Sbjct: 426 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 466
>gi|29841430|gb|AAP06462.1| similar to GenBank Accession Number AK010678 ribosomal protein S3
in Mus musculus [Schistosoma japonicum]
Length = 226
Score = 88.5 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 78/189 (41%), Gaps = 11/189 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L+ L G + + + K +I+ + + ++G+ I ++ L
Sbjct: 25 EFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGSRRIRELTSVLQKRFGFPDG 84
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L ++ ++A A+S+ +L + R+A ++ M GA G +VI SG++
Sbjct: 85 TLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGILRFIMESGARGAEVIVSGKI 144
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
G + ++ + +G + + ++D + G GIKV + D DS+
Sbjct: 145 KG-QRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQGILGIKVKIM-----MDHDSSG 198
Query: 216 PAAEHRVVE 224
+ +
Sbjct: 199 KKGPRKPLP 207
>gi|302748806|gb|ADL63883.1| ribosomal protein S3 [Hypericum sp. Qiu 95082]
Length = 439
Score = 88.5 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 47/164 (28%), Positives = 79/164 (48%), Gaps = 5/164 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ L G+ ++ I+ II+ + +I+K+R LSN TN+
Sbjct: 277 KVMELIEKLLDLGGIGEL-IKGIEMMIEIILRNRIIAYRYNSYLNEIKKMRSLLSNRTNT 335
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQL-ERRVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL ++R FR + V+ M+ G +G+++
Sbjct: 336 NTLIESVKIQSVYQSASPIAQDISFQLRKKRRSFRSIFSKIVKDIPLVMKKGVEGIRICC 395
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197
SGR GA+++RTEC G+ IDY A T YG G
Sbjct: 396 SGRSKGAKIARTECGNYGKTSRNVFNQKIDYAPAEVSTRYGISG 439
>gi|133907791|gb|ABO42355.1| ribosomal protein S3 [Austrobuxus megacarpus]
Length = 479
Score = 88.5 bits (218), Expect = 7e-16, Method: Composition-based stats.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 320 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 378
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+LIAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 379 NTLIESVKIQSVYQSASLIAQDISFQLRNKTRSFRSIFTKIVKDIPLVMKKGVEGIRICC 438
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 439 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 479
>gi|302748879|gb|ADL63919.1| ribosomal protein S3 [Mirabilis jalapa]
Length = 466
Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 82/163 (50%), Gaps = 5/163 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ + ++ + G+ + LI+ II+ + + +++K+R LSN TN+
Sbjct: 305 KVMKLIEKFIDLGGI-RELIKGIEMMIEIILKNRKILYGYNSYLNEVKKMRSLLSNRTNT 363
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + +R FR + V++ M+ G +G+++
Sbjct: 364 NTLIESVKIQSVYQSASPIAQDISFQPKNKRRSFRSIFSQIVKNIPLVMKKGVEGIRICC 423
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196
SGRL GAE++RTEC G+ L IDY +A T YG
Sbjct: 424 SGRLAGAEIARTECGKYGKTSCNVLHQKIDYASAEVSTRYGIL 466
>gi|302748515|gb|ADL63738.1| ribosomal protein S3 [Acorus gramineus]
Length = 137
Score = 88.1 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 64/123 (52%), Gaps = 1/123 (0%)
Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSA 141
++ K+R LSN T ++ + ++ +A+L+AQ I+ +L R + VQ
Sbjct: 15 NEVNKMRSFLSNRTKTKTFIESVKIQSIYQSASLLAQEISLKLRRETKLXTIFAQIVQDI 74
Query: 142 MRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200
G +G+++ SGRL G E+SRTEC G + IDY +A E YG G+KV
Sbjct: 75 PYRWGVEGIRICCSGRLGGVEMSRTECGKYGITKCHVFKHQIDYASADIELPYGILGVKV 134
Query: 201 YVS 203
++S
Sbjct: 135 WIS 137
>gi|302748921|gb|ADL63940.1| ribosomal protein S3 [Opilia amentacea]
Length = 468
Score = 88.1 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 9/163 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ I + G+ G +++K+R LSN T
Sbjct: 309 KVMELIEKFIDLGGIGEL---IKGIEMMIEIILRNRGIPYGYNSYLNEVKKMRSLLSNRT 365
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 366 NTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRI 425
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 426 CCSGRLKGAEIARTECGKYGKTSCNVFNQKIDYAPAEVSTRYG 468
>gi|290349642|dbj|BAI77929.1| ribosomal protein S3 [Culex quinquefasciatus]
gi|290349644|dbj|BAI77930.1| ribosomal protein S3 [Culex quinquefasciatus]
Length = 165
Score = 88.1 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 69/159 (43%), Gaps = 6/159 (3%)
Query: 52 VAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPK 108
+ + + T II+ + R ++G+KG I ++ + + L +V
Sbjct: 1 YSGVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRELTAVVQKRFGFAPGTVELYAEKVAT 60
Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168
+ A A+S+ +L + RRA ++ M GA G +V+ SG+L G + +++ +
Sbjct: 61 RGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG-QRAKSMKF 119
Query: 169 LEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
++G + ++D T G GIKV + L
Sbjct: 120 VDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKVKIMLP 158
>gi|149068847|gb|EDM18399.1| rCG40478, isoform CRA_i [Rattus norvegicus]
Length = 189
Score = 88.1 bits (217), Expect = 9e-16, Method: Composition-based stats.
Identities = 36/164 (21%), Positives = 72/164 (43%), Gaps = 6/164 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIK 199
G + +++ +++G + + ++D G GIK
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIK 185
>gi|156084414|ref|XP_001609690.1| 40S ribosomal protein S3 protein [Babesia bovis T2Bo]
gi|154796942|gb|EDO06122.1| 40S ribosomal protein S3 protein, putative [Babesia bovis]
Length = 223
Score = 87.7 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 38/170 (22%), Positives = 72/170 (42%), Gaps = 6/170 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+K I ++ +
Sbjct: 25 EFLSRVLAEDGYSGVELRITPVRTEIIIRATRAREVVGEKARRIRELTSLIQKRFGFSPD 84
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L V + A A+S+ +L + + RRA ++ M GA G +VI SG+L
Sbjct: 85 TVELYAERVEHKGLCAMAQAESLRYKLLKGLAVRRAAYGVLRHIMESGAKGCEVIVSGKL 144
Query: 158 NGAELSRTECYLEGR--VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
A+ +++ + +G Q + + T + G GIKV +
Sbjct: 145 R-AQRAKSMKFKDGYLISTGQPAKTFVTSATRSVQLRQGVLGIKVKIMHP 193
>gi|133907861|gb|ABO42390.1| ribosomal protein S3 [Homalanthus populneus]
Length = 480
Score = 87.7 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ + I+ II+ + R +++K+R LSN TN+
Sbjct: 321 KVMELIEKFINLGGIGEF-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 379
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL +R FR + V+ M+ G +G+++
Sbjct: 380 NTLIESVKIQSVYQSASPIAQDISFQLRNKRRSFRSIFSKIVKDIPLVMKKGVEGIRICC 439
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 440 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 480
>gi|226476712|emb|CAX72248.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 77/189 (40%), Gaps = 11/189 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L+ L G + + + K +I+ + + ++G+ I ++ L
Sbjct: 25 EFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGSRRIRELTSVLQKRFGFPDG 84
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L ++ ++A A+S+ +L + R+A ++ M GA G +VI SG++
Sbjct: 85 TLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGILRFIMESGARGAEVIVSGKI 144
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
G + ++ + G + + ++D + G GIKV + D DS+
Sbjct: 145 KG-QRAKAMKFCYGLMIHSGDPVNYYVDKAVRHVQLPQGILGIKVKIM-----MDHDSSG 198
Query: 216 PAAEHRVVE 224
+ +
Sbjct: 199 KKGPRKPLP 207
>gi|288191243|gb|ADC43974.1| ribosomal protein S3 [Flacourtia jangomas]
Length = 486
Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 4/156 (2%)
Query: 43 LQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLS 102
L+ G LI+ II+ + R +++K+R LSN T + +
Sbjct: 331 LRDKFINLGGIGELIKGIEMMIEIILRNRRIPYRYNSYLNEMKKMRSLLSNRTKTNTLIE 390
Query: 103 VNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIASGRLN 158
++ +A+LIAQ I+ QL +R FR + V+ M +G+++ SGRL
Sbjct: 391 SVKIQSVYQSASLIAQDISFQLRNKRRSFRSIFSKIVKDISLLMNKWVEGIRICCSGRLK 450
Query: 159 GAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
GAE++RTEC G+ IDY A T YG
Sbjct: 451 GAEIARTECGKYGKTSCNVFNQKIDYAPAEVSTRYG 486
>gi|226476708|emb|CAX72246.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476710|emb|CAX72247.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476714|emb|CAX72249.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476718|emb|CAX72251.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476722|emb|CAX72253.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476724|emb|CAX72254.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476726|emb|CAX72255.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476728|emb|CAX72256.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476730|emb|CAX72257.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476732|emb|CAX72258.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226476734|emb|CAX72259.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482826|emb|CAX79380.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482828|emb|CAX79381.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482830|emb|CAX79382.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482832|emb|CAX79383.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482834|emb|CAX79384.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482838|emb|CAX79386.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482840|emb|CAX79387.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482842|emb|CAX79388.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482844|emb|CAX79389.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482846|emb|CAX79390.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482848|emb|CAX79391.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482850|emb|CAX79392.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482856|emb|CAX79395.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482858|emb|CAX79396.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482860|emb|CAX79397.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482862|emb|CAX79398.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482866|emb|CAX79400.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482868|emb|CAX79401.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 78/189 (41%), Gaps = 11/189 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L+ L G + + + K +I+ + + ++G+ I ++ L
Sbjct: 25 EFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGSRRIRELTSVLQKRFGFPDG 84
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L ++ ++A A+S+ +L + R+A ++ M GA G +VI SG++
Sbjct: 85 TLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGILRFIMESGARGAEVIVSGKI 144
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
G + ++ + +G + + ++D + G GIKV + D DS+
Sbjct: 145 KG-QRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQGILGIKVKIM-----MDHDSSG 198
Query: 216 PAAEHRVVE 224
+ +
Sbjct: 199 KKGPRKPLP 207
>gi|302748513|gb|ADL63737.1| ribosomal protein S3 [Acanthus mollis]
Length = 471
Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 5/163 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E + + + ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 310 KVMELIDKFIDLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 368
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
++ ++ +A+ IAQ I+ QL + FR + V++ M+ G G+++
Sbjct: 369 NTNIESVKIKSVYQSASPIAQDISFQLRTKTRSFRSIFSKIVKNIPLVMKKGVTGIRICC 428
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196
SGR GAE++RTEC G+ IDY A T YG
Sbjct: 429 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGIL 471
>gi|302748627|gb|ADL63794.1| ribosomal protein S3 [Catalpa fargesii]
Length = 473
Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 5/163 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 312 KVMELIEKFIDLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 370
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V++ M+ G G+++
Sbjct: 371 NTLIQSVKIKSVYQSASPIAQDISFQLRTKTRSFRSIFSKIVKNIPLVMKRGVTGIRICC 430
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196
SGR GAE++RTEC G+ IDY A T YG
Sbjct: 431 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGIL 473
>gi|226482824|emb|CAX79379.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 78/189 (41%), Gaps = 11/189 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L+ L G + + + K +I+ + + ++G+ I ++ L
Sbjct: 25 EFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGSRRIRELTSVLQKRFGFPDG 84
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L ++ ++A A+S+ +L + R+A ++ M GA G +VI SG++
Sbjct: 85 TLGLFAEKMTFRGLSAIAQAESLKYKLTYGLPVRKACYGILRFIMESGARGAEVIVSGKI 144
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
G + ++ + +G + + ++D + G GIKV + D DS+
Sbjct: 145 KG-QRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQGILGIKVKIM-----MDHDSSG 198
Query: 216 PAAEHRVVE 224
+ +
Sbjct: 199 KKGPRKPLP 207
>gi|166895622|ref|YP_001661416.1| ribosomal protein S3 [Cycas taitungensis]
gi|166706954|dbj|BAF98418.1| ribosomal protein S3 [Cycas taitungensis]
Length = 579
Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 47/175 (26%), Positives = 77/175 (44%), Gaps = 6/175 (3%)
Query: 43 LQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIH 100
L L G LI+ II+ + + G +++K+R LS+ TN+
Sbjct: 396 LMEKLIDLGGIGELIKGIGMIDAIILRNRSGRIPYGYNYYLNEVQKMRSLLSDGTNTNTS 455
Query: 101 LSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQSA---MRFGADGVKVIASGR 156
+ ++ +A+ IAQ I+ Q FR + V+ M G+++ SGR
Sbjct: 456 IGSVKIESVYQSASPIAQDISFQPRNGTGSFRSIFGQIVRDITFVMPKRVKGIRICRSGR 515
Query: 157 LNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDS 211
GAE++RTEC G+ ID+ +A T YG G+KV++S +E
Sbjct: 516 SKGAEIARTECREYGKTSCNVSHHKIDHASAKVSTRYGISGVKVWISYSNERKGR 570
>gi|189502878|gb|ACE06820.1| unknown [Schistosoma japonicum]
Length = 230
Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 78/189 (41%), Gaps = 11/189 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L+ L G + + + K +I+ + + ++G+ I ++ L
Sbjct: 25 EFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGSRRIRELTSVLQKRFGFPDG 84
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L ++ ++A A+S+ +L + R+A ++ M GA G +VI SG++
Sbjct: 85 TLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGILRFIMESGARGAEVIVSGKI 144
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
G + ++ + +G + + ++D + G GIKV + D DS+
Sbjct: 145 KG-QRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQGILGIKVKIM-----MDHDSSG 198
Query: 216 PAAEHRVVE 224
+ +
Sbjct: 199 KKGPRKPLP 207
>gi|288191168|gb|ADC43937.1| ribosomal protein S3 [Trigonostemon verrucosus]
Length = 421
Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 43/138 (31%), Positives = 66/138 (47%), Gaps = 4/138 (2%)
Query: 64 CRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQ 123
II+ + R +++K+R LSN TN+ ++ +A+ IAQ I+ Q
Sbjct: 284 REIILRNRRIPYGYNSYFREMKKMRSLLSNRTNTNTKFESVKIKSVYQSASPIAQDISFQ 343
Query: 124 LERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
L + FR + V+ M+ G +G+++ SGRL GAE++RTEC G+
Sbjct: 344 LRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFN 403
Query: 180 AHIDYGTAVAETAYGSCG 197
IDY A T YG G
Sbjct: 404 QKIDYAPAEVSTRYGILG 421
>gi|150193|gb|AAA25438.1| S3 ribosomal protein [Mycoplasma capricolum]
Length = 90
Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/68 (50%), Positives = 45/68 (66%)
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200
A++ GA G+K SGRL G E++RTE YLEG VPL TLR +IDY A T YG G+KV
Sbjct: 1 ALKAGAKGIKTAVSGRLGGVEMARTEGYLEGSVPLSTLRNNIDYALYEAPTTYGQIGVKV 60
Query: 201 YVSLRDEV 208
+++ +
Sbjct: 61 WINHGEVF 68
>gi|50284382|emb|CAH04122.1| ribsomal protein S3e [Papilio dardanus]
Length = 220
Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 42/190 (22%), Positives = 80/190 (42%), Gaps = 13/190 (6%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E+L L + G + + + T II+ + R ++G+KG I ++ +K N+
Sbjct: 24 EFLTRELAEDGYSGVEVRVTPIRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQ 83
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G + + SG+L
Sbjct: 84 SVELYAEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEAVVSGKL 143
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
G + +++ +++G + + + DY T G GIKV + + D
Sbjct: 144 RG-QRAKSMKFVDGLM-IHSGDPCNDYVNTATRHVLLRQGVLGIKV-----EIMLPWDXQ 196
Query: 215 IPAAEHRVVE 224
R
Sbjct: 197 GKNGPKRPQP 206
>gi|133907865|gb|ABO42392.1| ribosomal protein S3 [Humiria balsamifera]
Length = 469
Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 310 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 368
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 428
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGR GAE++RTEC G+ IDY A T YG
Sbjct: 429 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 469
>gi|133907907|gb|ABO42413.1| ribosomal protein S3 [Phyllanthus calycinus]
Length = 463
Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 304 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 362
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153
++ ++ +A+LIAQ I+ QL + FR + + + M+ G +G+++
Sbjct: 363 NTNIESVKMKSVYQSASLIAQDISFQLRNKTRSFRSIYSQIVKDIPLVMKKGVEGIRICC 422
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 423 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 463
>gi|133907849|gb|ABO42384.1| ribosomal protein S3 [Euphorbia abyssinica]
Length = 484
Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + +++K+R LSN TN+
Sbjct: 325 KVMELIEKFINLGEIGEL-IKGIEMMIEIILRNRTISYGYNSYLNEMKKMRSLLSNRTNT 383
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+LIAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 384 NTLIESVKIKSVYQSASLIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRISC 443
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 444 SGRLEGAEIARTECGKYGKTSCNVFNQKIDYAFAEVSTRYG 484
>gi|312232671|gb|ADQ53664.1| ribosomal protein S3 [Croton catamarcensis]
Length = 426
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ + I+ II+ + R +++K+R LSN TN+
Sbjct: 267 KVMELIEKFINLGGIGEF-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 325
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 326 NTLIFSVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKDIPLVMKKGVEGIRICC 385
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 386 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 426
>gi|312232797|gb|ADQ53727.1| ribosomal protein S3 [Croton poecilanthus]
Length = 472
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYEYNSYLNEMKKMRSLLSNRTNT 371
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472
>gi|133907811|gb|ABO42365.1| ribosomal protein S3 [Caryocar glabrum]
Length = 480
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 77/161 (47%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + + +++K+R LSN TN+
Sbjct: 321 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRKIPYGYNSYLNEMKKMRSLLSNRTNA 379
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL +R FR + V+ M+ G +G+++
Sbjct: 380 NTLIESVKIQSVYQSASPIAQDISFQLRNKRRSFRSIFSQIVKDIPLVMKKGVEGIRICC 439
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGR GAE++RTEC + IDY A T YG
Sbjct: 440 SGRSKGAEIARTECGKYRKTSRNVFNQKIDYAPAEVSTRYG 480
>gi|312232823|gb|ADQ53740.1| ribosomal protein S3 [Croton setiger]
Length = 474
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 315 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 373
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 374 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 433
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 434 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 474
>gi|312232813|gb|ADQ53735.1| ribosomal protein S3 [Croton sampatik]
Length = 474
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ + I+ II+ + R +++K+R LSN TN+
Sbjct: 315 KVMELIEKFINLGGIGEF-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 373
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 374 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 433
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 434 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 474
>gi|133907919|gb|ABO42419.1| ribosomal protein S3 [Reinwardtia indica]
Length = 480
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 9/163 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ G+ ++ + I + + G +I+K+R LSN T
Sbjct: 321 KVMELIEKFRNLGGIGEL---KKGIEMMIEIILRNRRIPYGYSSYLNEIKKMRSLLSNRT 377
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151
++ ++ ++ +A+LIAQ I+ QL +R FR + V+ M+ G +G+++
Sbjct: 378 HTNTLINSVKIQSVYQSASLIAQDISFQLRNKRRSFRSIFTKIVKDIPLVMKKGVEGIRI 437
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGR GAE++RTEC G+ IDY A T YG
Sbjct: 438 CCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 480
>gi|302748517|gb|ADL63739.1| ribosomal protein S3 [Actinidia arguta]
Length = 474
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 82/173 (47%), Gaps = 6/173 (3%)
Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90
LL +D K+ E + ++ G+ ++ I+ II+ R +++K+R
Sbjct: 304 NLLGKD-KVMELIDKFIELGGIGEL-IKGIEILIEIILRKRRIPYGYNYYLNEVKKMRSL 361
Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGA 146
LSN T + + ++ +A+ IAQ I+ Q ++ FR + V+ M+ G
Sbjct: 362 LSNRTKTNTLIESVKIKSVYQSASPIAQDISFQPRKKTRSFRSIFSKIVKDIPLVMKKGV 421
Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIK 199
+G+++ SGR GAE++RTEC G+ IDY A T YG G+K
Sbjct: 422 EGIRICCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGISGVK 474
>gi|133907843|gb|ABO42381.1| ribosomal protein S3 [Erythrospermum phytolaccoides]
Length = 449
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ R +++K+R LSN TN+
Sbjct: 290 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRKRRIPYEYNSYLNEMKKMRSLLSNRTNT 348
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL+ + FR + ++ M+ G +G+++
Sbjct: 349 NTLIESVKIKSVYQSASPIAQDISFQLKNKTRSFRSIFSKIIKDIPLVMKKGVEGIRICC 408
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 409 SGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 449
>gi|302748798|gb|ADL63879.1| ribosomal protein S3 [Hydrastis canadensis]
Length = 469
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 9/163 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E+++ + G+ + I + + + G +++K+R LSN T
Sbjct: 310 KVMEFIEKFIDLGGIGE---WIKGIEMMIEIILRKRRIPYGYNSYLNEVKKMRSLLSNRT 366
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ Q + FR + V++ M G +G+++
Sbjct: 367 NTNTLIESVKIQSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKNIKLVMPKGVEGIRI 426
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGR GAE++RTEC G+ IDY A T YG
Sbjct: 427 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 469
>gi|133907833|gb|ABO42376.1| ribosomal protein S3 [Dissiliaria muelleri]
Length = 479
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 320 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 378
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153
+ ++ +A+LIAQ I+ QL + FR + + + M+ G +G+++
Sbjct: 379 NTLIESVKIQSVYQSASLIAQDISFQLRNKTRSFRSILTKIVKDIPLVMKKGVEGIRICC 438
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 439 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 479
>gi|312232637|gb|ADQ53647.1| ribosomal protein S3 [Acidocroton trichophyllus]
Length = 471
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 73/161 (45%), Gaps = 4/161 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E + G LI+ II+ + R +++K+ LSN TN+
Sbjct: 311 KVMELIIEKFINLGGIGELIKGIEMMIEIILRNRRIPYEYNSYLNEMKKMLSLLSNRTNT 370
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 371 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 430
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 431 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 471
>gi|226476720|emb|CAX72252.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 78/189 (41%), Gaps = 11/189 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L+ L G + + + K +I+ + + ++G+ I ++ L
Sbjct: 25 EFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGSRRIRELTSVLQKRFGFPDG 84
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L ++ ++A A+S+ +L + R+A ++ M GA G +VI SG++
Sbjct: 85 TLGLFAEKMTLRGLSAIAQAESLRYKLTYGLPVRKACYGILRFIMESGARGAEVIVSGKI 144
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
G + ++ + +G + + ++D + G GIKV + D DS+
Sbjct: 145 KG-QRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQGILGIKVKIM-----MDHDSSG 198
Query: 216 PAAEHRVVE 224
+ +
Sbjct: 199 KKGPRKPLP 207
>gi|254720838|ref|ZP_05182630.1| 30S ribosomal protein S3 [Bacillus anthracis str. A1055]
Length = 43
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 27/44 (61%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQ 44
MGQK+NPI R+GV W SRWFA +Y LLHED+KIREY+
Sbjct: 1 MGQKVNPIGLRVGVIRDWESRWFAE-KDYATLLHEDIKIREYIN 43
>gi|256075800|ref|XP_002574204.1| 40S ribosomal protein S3 [Schistosoma mansoni]
gi|238659403|emb|CAZ30437.1| 40S ribosomal protein S3, putative [Schistosoma mansoni]
Length = 230
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 78/189 (41%), Gaps = 11/189 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L+ L G + + + K +I+ + + ++G+ I ++ L
Sbjct: 25 EFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGSRRIRELTSVLQKRFGFADG 84
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L ++ ++A A+S+ +L + R+A ++ M GA G +VI SG++
Sbjct: 85 TLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGILRFIMESGARGAEVIVSGKI 144
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
G + ++ + +G + + +ID + G GIKV + D DS+
Sbjct: 145 KG-QRAKAMKFCDGLMIHSGDPVNNYIDKAVRHVQLPQGILGIKVKIM-----LDHDSSG 198
Query: 216 PAAEHRVVE 224
+ +
Sbjct: 199 KKGPRKPLP 207
>gi|312232815|gb|ADQ53736.1| ribosomal protein S3 [Croton sapiifolius]
Length = 472
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472
>gi|312232809|gb|ADQ53733.1| ribosomal protein S3 [Croton roraimensis]
Length = 469
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ + I+ II+ + R +++K+R LSN TN+
Sbjct: 310 KVMELIEKFINLGGIGEF-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 368
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 428
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 429 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 469
>gi|133907783|gb|ABO42351.1| ribosomal protein S3 [Acalypha californica]
Length = 474
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 48/160 (30%), Positives = 79/160 (49%), Gaps = 5/160 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 317 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 375
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRA---VQSAMRFGADGVKVIAS 154
+ ++ +A+LIAQ I+ QL R FR + + M+ G +G+++ S
Sbjct: 376 NTLIESIKMKSVYQSASLIAQDISFQLRSRS-FRSIFSKIEKDLPLVMKKGVEGIRICCS 434
Query: 155 GRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
GRL GAE++RTEC G+ L IDY A T YG
Sbjct: 435 GRLEGAEIARTECGKYGKTSRNVLNQKIDYAPAEVSTRYG 474
>gi|133907895|gb|ABO42407.1| ribosomal protein S3 [Ostodes paniculata]
Length = 480
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 321 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 379
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 380 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 439
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 440 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 480
>gi|1685377|gb|AAB36828.1| ribosomal protein S3 [Borrelia burgdorferi]
Length = 93
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER- 59
MGQK++P R+ +N W S+W+ Y +LHED IR + LK IE
Sbjct: 1 MGQKVHPYSLRVKINKDWKSKWYFDKKLYSRILHEDFLIRREIMKFLKGIKFDISDIEII 60
Query: 60 --THKNCRIIVYSARPGLIIGKKGTDIEKIRK 89
+ +++ + RPG +IG KG+++EKI +
Sbjct: 61 RNNPQKVTVVIVTPRPGSVIGLKGSNLEKIGQ 92
>gi|312232761|gb|ADQ53709.1| ribosomal protein S3 [Croton miarensis]
gi|312232783|gb|ADQ53720.1| ribosomal protein S3 [Croton nobilis]
Length = 472
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472
>gi|312232755|gb|ADQ53706.1| ribosomal protein S3 [Croton maestrensis]
Length = 472
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRAFRSIFSKIVKDIPLVMKKGVEGIRICC 431
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472
>gi|133907885|gb|ABO42402.1| ribosomal protein S3 [Micrantheum hexandrum]
Length = 479
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 9/163 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ I + + G +++K+R LSN T
Sbjct: 320 KVMELIEKFINPGGIGEL---IKGIEMMIEIILRNRIIPYGYNSYLNEMKKMRSLLSNRT 376
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKV 151
N+ + ++ +A+LIAQ I+ QL + FR + + + M+ G +G+++
Sbjct: 377 NTNTLIESVKIQSVYQSASLIAQDISFQLRNKTRSFRSILTKIVKDIPLVMKKGVEGIRI 436
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 437 CCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 479
>gi|312232837|gb|ADQ53747.1| ribosomal protein S3 [Croton thomasii]
Length = 472
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRAFRSIFSKIVKDIPLVMKKGVEGIRICC 431
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472
>gi|312232779|gb|ADQ53718.1| ribosomal protein S3 [Croton nitens]
Length = 472
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472
>gi|312232775|gb|ADQ53716.1| ribosomal protein S3 [Croton morifolius]
gi|312232803|gb|ADQ53730.1| ribosomal protein S3 [Croton pulcher]
Length = 472
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472
>gi|312232749|gb|ADQ53703.1| ribosomal protein S3 [Croton louvelii]
Length = 472
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472
>gi|226476736|emb|CAX72260.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 35/189 (18%), Positives = 78/189 (41%), Gaps = 11/189 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L+ L G + + + K +I+ + + ++G+ I ++ L
Sbjct: 25 EFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGSRRIRELTSVLQKRFGFPDG 84
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L ++ ++A A+S+ +L + R+A ++ M GA G +VI SG++
Sbjct: 85 TLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGILRFIMESGARGAEVIVSGKI 144
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
G + ++ + +G + + ++D + G GIKV + D DS+
Sbjct: 145 KG-QRAKAMKFCDGLLIHSGDPVNYYVDKAVRHVQLPQGILGIKVKIM-----MDHDSSG 198
Query: 216 PAAEHRVVE 224
+ +
Sbjct: 199 KKGPRKPLP 207
>gi|312232781|gb|ADQ53719.1| ribosomal protein S3 [Croton niveus]
gi|312232817|gb|ADQ53737.1| ribosomal protein S3 [Croton schiedeanus]
Length = 472
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472
>gi|133907909|gb|ABO42414.1| ribosomal protein S3 [Phyllanthus epiphyllanthus]
Length = 478
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 79/161 (49%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 319 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMQKMRSLLSNRTNT 377
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153
+ ++ +A+LIAQ I+ QL + FR + + + M+ G +G+++
Sbjct: 378 NTLIESVKMKSVYQSASLIAQDISFQLRNKTRSFRSIYSKIVKDIPLVMKKGVEGIRICC 437
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 438 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 478
>gi|312232777|gb|ADQ53717.1| ribosomal protein S3 [Croton myricifolius]
Length = 472
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472
>gi|312232785|gb|ADQ53721.1| ribosomal protein S3 [Croton noronhae]
Length = 472
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRAFRSIFSKIVKDIPLVMKKGVEGIRICC 431
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472
>gi|209733334|gb|ACI67536.1| 40S ribosomal protein S3 [Salmo salar]
Length = 244
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/183 (20%), Positives = 76/183 (41%), Gaps = 11/183 (6%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M G+ G +V+ SG+L
Sbjct: 83 NVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGSKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDS 211
G + +++ ++ G + + ++D G GIKV + L ++
Sbjct: 143 RG-QRAKSMKFVGGLMIHSGDPVNYYVDTAM-EVGIRQGVLGIKVKIMLPWDPSGKIGPK 200
Query: 212 DST 214
Sbjct: 201 KPL 203
>gi|312232743|gb|ADQ53700.1| ribosomal protein S3 [Croton lepidotus]
Length = 472
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472
>gi|312232735|gb|ADQ53696.1| ribosomal protein S3 [Croton lanatus var. tatacuensis]
Length = 472
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472
>gi|289724874|gb|ADD18372.1| 40S ribosomal protein S3 [Glossina morsitans morsitans]
Length = 225
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 78/189 (41%), Gaps = 11/189 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L+ L G + + + K +I+ + + ++G+ I ++ L
Sbjct: 20 EFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGSRRIRELTSVLQKRFGFADG 79
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L ++ ++A A+S+ +L + R+A ++ M GA G +VI SG++
Sbjct: 80 TLGLFAEKMTFRGLSAIAQAESLRYKLTYGLPVRKACYGILRFIMESGARGAEVIVSGKI 139
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
G + ++ + +G + + +ID + G GIKV + D DS+
Sbjct: 140 KG-QRAKAMKFCDGLMIHSGDPVNNYIDKAVRHVQLPQGILGIKVKIM-----LDHDSSG 193
Query: 216 PAAEHRVVE 224
+ +
Sbjct: 194 KKGPRKPLP 202
>gi|272716700|gb|ACZ95652.1| ribosomal protein S3 [Pseudotsuga sinensis var. gaussenii]
Length = 569
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 7/148 (4%)
Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + + G ++ K+R LSN TN+ + ++ +A+LIAQ I
Sbjct: 422 GMMIEIILRNRRIPYGYNYYLNEVRKMRSLLSNRTNTNTLIGSVKILN-YQSASLIAQDI 480
Query: 121 AQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
+ Q R FR + + V+ M G G+++ GR GAE++RTEC G+
Sbjct: 481 SFQPRDRTRSFRSILSKIVRDIPLVMPKGVRGIRICRPGRSKGAEIARTECREYGKTSCN 540
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSL 204
R ID+ +A T YG G+KV +S
Sbjct: 541 ASRHKIDHASAKVSTRYGILGVKVRISF 568
Score = 55.0 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54
M +K+NPI RL +N + + WF+ YG L+++D+ +R+Y + +
Sbjct: 1 MARKVNPISVRLNLNRSSDPSWFSDYY-YGKLVYQDVNLRDYFGSIRPPTRKTFGFRLGR 59
Query: 55 ILIERTHKNCRIIVY 69
+I + K I ++
Sbjct: 60 CIIHHSPKRTFIHLF 74
>gi|328541180|gb|AEB21814.1| ribosomal protein S3 [Telaranea plumulosa]
Length = 375
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLKKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309
Query: 140 SAMRF-GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGI 198
+ G+++ SGRLNGAE+++TE G IDY YG G+
Sbjct: 310 QIKKCPYVKGIRIGCSGRLNGAEIAKTEYKKYGETSXXXFSDQIDYAKXXXXXPYGILGV 369
Query: 199 KVYVSL 204
KV+VS
Sbjct: 370 KVWVSY 375
>gi|312232787|gb|ADQ53722.1| ribosomal protein S3 [Croton nubigenus]
Length = 469
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 310 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 368
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 428
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 429 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 469
>gi|133907877|gb|ABO42398.1| ribosomal protein S3 [Linum arboreum]
Length = 480
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 9/163 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ G+ ++ + I + + G +++K+R LSN T
Sbjct: 321 KVMELIEKFRNLGGIGEL---KKGIEMMIEIILRNRRIPYGYSSYLNEMKKMRSLLSNRT 377
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151
N + ++ +A+LIAQ I+ QL +R FR + V+ M+ G +G+++
Sbjct: 378 NXNXLIESVKIQSVYQSASLIAQDISFQLRNKRRSFRSIFSKIVKDIPLVMKKGVEGIRI 437
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGR GAE++ TEC G+ IDY A T YG
Sbjct: 438 CCSGRSKGAEIASTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 480
>gi|296094|emb|CAA51425.1| ribosomal protein S3 [Drosophila melanogaster]
Length = 246
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/190 (21%), Positives = 78/190 (41%), Gaps = 13/190 (6%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + + ++ +KG I ++ + N
Sbjct: 25 EFLTRELAEDGYSGVEVRVTPFGTEIIIMATKTQQVLAEKGRRIRELTAMVQKRFNFETG 84
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
I L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 85 RIELYAEKVAARGLCAIAQAESLRYKLTGELAVRRACYGVLRYIMESGAKGCEVVVSGKL 144
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLRDEVSDSDST 214
G + +++ +++G + + + DY T G GIKV V D
Sbjct: 145 RG-QRAKSMKFVDGLM-IHSGDPCNDYVETATRHVLLRQGVLGIKVKVM-----LPYDPK 197
Query: 215 IPAAEHRVVE 224
+ +
Sbjct: 198 NKIGPKKPLP 207
>gi|312232679|gb|ADQ53668.1| ribosomal protein S3 [Croton corinthius]
Length = 472
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTLSFRSIFSKIVKDIPLVMKKGVEGIRICC 431
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472
>gi|312232687|gb|ADQ53672.1| ribosomal protein S3 [Croton cupreatus]
Length = 472
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 313 KVMELIEKLINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472
>gi|114590683|ref|XP_001140763.1| PREDICTED: similar to 40S ribosomal protein S3 isoform 7 [Pan
troglodytes]
gi|114590685|ref|XP_001140990.1| PREDICTED: similar to 40S ribosomal protein S3 isoform 10 [Pan
troglodytes]
gi|114590687|ref|XP_001141075.1| PREDICTED: similar to 40S ribosomal protein S3 isoform 11 [Pan
troglodytes]
gi|114590689|ref|XP_001140834.1| PREDICTED: similar to 40S ribosomal protein S3 isoform 8 [Pan
troglodytes]
gi|114590691|ref|XP_001140906.1| PREDICTED: similar to 40S ribosomal protein S3 isoform 9 [Pan
troglodytes]
Length = 243
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/189 (21%), Positives = 77/189 (40%), Gaps = 11/189 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + ++ T II+ + R I G+KG I ++ +
Sbjct: 23 EFLTQELAEDGYSGVEVQVTPTRTEIIILATRTQNIPGEKGRRIRELTAIVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G KV+ASG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCKVVASGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
G + +++ +++G + + ++ G GIKV D T
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPINYYVGTAVCHVLLRQGVLGIKVKFM-----LPWDPTG 196
Query: 216 PAAEHRVVE 224
+ +
Sbjct: 197 KTGPKKPLP 205
>gi|115389474|ref|XP_001212242.1| 40S ribosomal protein S3 [Aspergillus terreus NIH2624]
gi|114194638|gb|EAU36338.1| 40S ribosomal protein S3 [Aspergillus terreus NIH2624]
Length = 263
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 32/160 (20%), Positives = 64/160 (40%), Gaps = 8/160 (5%)
Query: 69 YSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRV 128
++ G++ ++ + +K + + L +V ++A +S+ +L +
Sbjct: 54 HTQEVLGEQGRRIRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGL 113
Query: 129 VFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGT 186
RRA ++ M GA G +V+ SG+L A +++ + +G + Q + ID T
Sbjct: 114 AVRRACYGVLRFIMESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKEFIDSAT 172
Query: 187 AVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVEKD 226
G GIKV + SD A + +
Sbjct: 173 RHVLLRQGVLGIKVKIMRG-----SDPEGKAGPQKTLPDS 207
>gi|312232685|gb|ADQ53671.1| ribosomal protein S3 [Croton cuneatus]
Length = 429
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 270 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 328
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 329 NTLIESVKIQSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 388
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 389 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 429
>gi|312232661|gb|ADQ53659.1| ribosomal protein S3 [Croton argyratus]
Length = 435
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 276 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 334
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 335 NTLIKSVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 394
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 395 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 435
>gi|133907839|gb|ABO42379.1| ribosomal protein S3 [Endospermum moluccanum]
Length = 469
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 310 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 368
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 369 NTLIESVKIQSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 428
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 429 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 469
>gi|312232699|gb|ADQ53678.1| ribosomal protein S3 [Croton eichleri]
Length = 472
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAPVSTRYG 472
>gi|312232645|gb|ADQ53651.1| ribosomal protein S3 [Croton adenophyllus]
gi|312232729|gb|ADQ53693.1| ribosomal protein S3 [Croton humilis]
Length = 472
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472
>gi|288191291|gb|ADC43998.1| ribosomal protein S3 [Hua gabonii]
Length = 479
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 9/163 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ I + + G +++K+R LSN T
Sbjct: 320 KVMELIEQLINLGGIGEL---IKGIEMMIEIILRNRIIPYGYNSYLNEVKKMRSLLSNRT 376
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ QL + FR + VQ M+ G +G+++
Sbjct: 377 NTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVQDIPLVMKKGVEGIRI 436
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGR GAE++RTEC G+ IDY A T YG
Sbjct: 437 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 479
>gi|133907871|gb|ABO42395.1| ribosomal protein S3 [Klainedoxa gabonensis]
Length = 469
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/163 (28%), Positives = 78/163 (47%), Gaps = 9/163 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ I + G+ G +I+K+R LSN T
Sbjct: 310 KVMELIEKFINLGGIGEL---IKGIEMMIEIILRNRGIPYGYNSYLNEIKKMRSLLSNRT 366
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+LIAQ I+ +L + FR + V+ M+ G +G+++
Sbjct: 367 NTNTLIESVKIQSVYQSASLIAQDISLKLRNKTRSFRSIFSKIVKDIPLVMKKGMEGIRI 426
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY +A T YG
Sbjct: 427 CCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYASAEVSTRYG 469
>gi|133907835|gb|ABO42377.1| ribosomal protein S3 [Elaeodendron orientale]
Length = 480
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 9/163 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ I + + + G +++K+R LSN T
Sbjct: 321 KVMELIEKFINLGGIGEL---IKGIEMMIEIILRKRKIPYGYNFYLNEVKKMRSLLSNRT 377
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 378 NTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRI 437
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGR GAE++RTEC G+ IDY A T YG
Sbjct: 438 CCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 480
>gi|312232719|gb|ADQ53688.1| ribosomal protein S3 [Croton goudotii]
Length = 472
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + + + M+ G +G+++
Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSILSKIVKDIPLVMKKGVEGIRICC 431
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472
>gi|312232707|gb|ADQ53682.1| ribosomal protein S3 [Croton fruticulosus]
Length = 472
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472
>gi|312232657|gb|ADQ53657.1| ribosomal protein S3 [Croton argentinus]
gi|312232717|gb|ADQ53687.1| ribosomal protein S3 [Croton gnaphalii]
gi|312232737|gb|ADQ53697.1| ribosomal protein S3 [Croton laureltyanus]
Length = 426
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ + I+ II+ + R +++K+R LSN TN+
Sbjct: 267 KVMELIEKFINLGGIGEF-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 325
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 326 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKDIPLVMKKGVEGIRICC 385
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 386 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 426
>gi|223927971|gb|ACN23633.1| ribosomal protein S3 [Halimeda discoidea]
Length = 135
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 63/135 (46%), Gaps = 8/135 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK++P+ F LG+ S+W+A Y + ED +R L K+A KI I R
Sbjct: 1 MGQKVHPLGFXLGITQPHLSQWYAXKRYYSKYVLEDHFVRTILSEKYKRAKFEKIHIXRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN-------MTNSEIHLSVNEVPKPEIN 112
+ I+++ +P ++I KK + +K++ + + + + +I+
Sbjct: 61 IEDHLEIVIHXQKPDILIXKKSETXKSFQKQIKKYIFQYRQIEWNSKLKVXVYIFRCKIH 120
Query: 113 ATLIAQSIAQQLERR 127
A+ I + LE+R
Sbjct: 121 ASXXXDFIVEHLEKR 135
>gi|312232677|gb|ADQ53667.1| ribosomal protein S3 [Croton coriaceus]
Length = 472
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + + + M+ G +G+++
Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIYSKIVKDIPLVMKKGVEGIRICC 431
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 432 SGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472
>gi|133907801|gb|ABO42360.1| ribosomal protein S3 [Brexia madagascariensis]
Length = 470
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 9/163 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ I + + + G +++K+R LSN T
Sbjct: 311 KVMELIEKFINLGGIGEL---IKGIEMMIEIILRKRKIPYGYNFYLNEVKKMRSLLSNRT 367
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ +L +R FR + V+ M+ G +G+++
Sbjct: 368 NTNTLIESVKIKSVYQSASPIAQDISLKLRNKRRSFRSIFSKIVKDIPLVMKKGVEGIRI 427
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGR GAE++RTEC G+ IDY A T YG
Sbjct: 428 CCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 470
>gi|312232771|gb|ADQ53714.1| ribosomal protein S3 [Croton minimus]
Length = 436
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/167 (27%), Positives = 78/167 (46%), Gaps = 10/167 (5%)
Query: 34 HEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKL 91
ED K+ E ++ + G+ ++ I + + + G +++K+R L
Sbjct: 274 KED-KVMELIEKFINLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEMKKMRSLL 329
Query: 92 SNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGAD 147
SN TN+ + ++ +A+ IAQ I+ QL + FR + V+ M+ G +
Sbjct: 330 SNRTNTNTLIESVKMKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVE 389
Query: 148 GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
G+++ SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 390 GIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 436
>gi|133907799|gb|ABO42359.1| ribosomal protein S3 [Bischofia javanica]
Length = 480
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 321 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 379
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 380 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 439
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 440 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 480
>gi|133907807|gb|ABO42363.1| ribosomal protein S3 [Carallia brachiata]
Length = 480
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + + +++K+R LSN TN+
Sbjct: 321 KVMELIEKFINLGRIGEL-IKGIEMMIEIILRNRKIPYGYNSYLNEMKKMRSLLSNRTNT 379
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ + ++ +A+ IAQ I+ QL ++ FR + V+ M+ G +G+++
Sbjct: 380 KTLIESVKIQSVYQSASPIAQDISFQLRNKKRAFRSIFSKIVKDIPLVMKKGVEGIRICC 439
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGR GAE++RTEC G+ L IDY A T YG
Sbjct: 440 SGRSEGAEIARTECGKYGKTSLNVFNQKIDYAPAEVSTRYG 480
>gi|312232695|gb|ADQ53676.1| ribosomal protein S3 [Croton draco]
gi|312232829|gb|ADQ53743.1| ribosomal protein S3 [Croton speciosus]
Length = 472
Score = 86.6 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + + + M+ G +G+++
Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIYSQIVKDIPLVMKKGVEGIRICC 431
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472
>gi|312232807|gb|ADQ53732.1| ribosomal protein S3 [Croton piptocalyx]
Length = 268
Score = 86.6 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ + I+ II+ + R +++K+R LSN TN+
Sbjct: 109 KVMELIEKFINLGGIGEF-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 167
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 168 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 227
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 228 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 268
>gi|133907827|gb|ABO42373.1| ribosomal protein S3 [Croton alabamensis var. alabamensis]
Length = 480
Score = 86.6 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 321 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 379
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 380 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 439
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 440 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAPVSTRYG 480
>gi|312232739|gb|ADQ53698.1| ribosomal protein S3 [Croton lechleri]
Length = 280
Score = 86.6 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 121 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 179
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 180 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 239
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 240 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAPVSTRYG 280
>gi|312232733|gb|ADQ53695.1| ribosomal protein S3 [Croton jimenezii]
Length = 472
Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + + + M+ G +G+++
Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIYSKIVKDIPLVMKKGVEGIRICC 431
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472
>gi|312232725|gb|ADQ53691.1| ribosomal protein S3 [Croton hircinus]
Length = 429
Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + R ++ K+R LSN TN+
Sbjct: 270 KVMELIEKFINLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMTKMRSLLSNRTNT 328
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+L ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 329 NTYLESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 388
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 389 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 429
>gi|312232845|gb|ADQ53751.1| ribosomal protein S3 [Croton yavitensis]
Length = 472
Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 372 NTLIESVKIQSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472
>gi|312232643|gb|ADQ53650.1| ribosomal protein S3 [Brasiliocroton mamoninha]
Length = 469
Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 310 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 368
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 369 NTLIESVKIQSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 428
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 429 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 469
>gi|302748941|gb|ADL63950.1| ribosomal protein S3 [Peperomia obtusifolia]
Length = 486
Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 43/175 (24%), Positives = 76/175 (43%), Gaps = 10/175 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E+++ + G+ + L I+ + +++K+R L N TN+
Sbjct: 313 KVMEWIEKFIDLGGIGEFLKGIELIIEI-ILKNRSIPYRYNSYLNEVQKMRSLLYNRTNT 371
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLER------RVVFRRA---MKRAVQSAMRFGADG 148
+ ++ +A+ IAQ I+ Q +FR + + + M G +G
Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQPRNLYNIISGRLFRSILSPIWKEIPLVMEKGVEG 431
Query: 149 VKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
+++ SGRL G E++RT C G+ IDY A T YG G+KV +S
Sbjct: 432 IRICCSGRLKGGEIARTACGKYGKTSRNVFNKKIDYAPAEVSTRYGISGVKVRIS 486
>gi|312232647|gb|ADQ53652.1| ribosomal protein S3 [Croton alabamensis]
Length = 472
Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAPVSTRYG 472
>gi|133907929|gb|ABO42424.1| ribosomal protein S3 [Stachystemon axillaris]
Length = 479
Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN
Sbjct: 320 KVMELIEKFINPGGIGEL-IKGIEMMIEIILRNRRIPXGYNSYLNEMKKMRSLLSNRTNX 378
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153
+ ++ +A+LIAQ I+ QL + FR + + + M+ G +G+++
Sbjct: 379 NTLIESVKIQSVYQSASLIAQDISFQLRNKTRSFRSXLTKIVKDIPLVMKKGVEGIRICC 438
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 439 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 479
>gi|133907935|gb|ABO42427.1| ribosomal protein S3 [Thryallis longifolia]
Length = 466
Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + + +I+K+R LSN T +
Sbjct: 307 KVMELIEKFINLGRIGEL-IKAIEMMIEIILRNRKIPYGYNSYLNEIQKMRSLLSNRTKT 365
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAM---KRAVQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL +R FR +++ M+ G +G+++
Sbjct: 366 NTLIESVKIQSVYQSASPIAQDISFQLRNKRRSFRSIFSKRVKSIPLVMKKGVEGIRISC 425
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGR GAE++RTEC G+ IDY A T YG
Sbjct: 426 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 466
>gi|224065262|ref|XP_002301744.1| predicted protein [Populus trichocarpa]
gi|222843470|gb|EEE81017.1| predicted protein [Populus trichocarpa]
Length = 74
Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 28/74 (37%), Positives = 47/74 (63%)
Query: 134 MKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAY 193
MK+A++ + + G++V + L+G +++R E EGRVPLQTLRA I+Y + T Y
Sbjct: 1 MKKAIELTEQSNSKGIQVQIAKHLDGKKIARAEWVREGRVPLQTLRAKINYCSYTVRTIY 60
Query: 194 GSCGIKVYVSLRDE 207
GIK+++ + +E
Sbjct: 61 RVLGIKIWIFIDEE 74
>gi|226482864|emb|CAX79399.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 230
Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 34/189 (17%), Positives = 77/189 (40%), Gaps = 11/189 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L+ L G + + + K +I+ + + ++G+ I ++ L
Sbjct: 25 EFLKRELADDGYSGFQVRESRKYTEVIILATKTQSVLGEGSRRIRELTSVLQKRFGFPDG 84
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L ++ ++A A+ + +L + R+A ++ M GA G +VI SG++
Sbjct: 85 TLGLFAEKMTFRGLSAIAQAEPLRYKLTYGLPVRKACYGILRFIMESGARGAEVIVSGKI 144
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
G + ++ + +G + + ++D + G GIKV + D DS+
Sbjct: 145 KG-QRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQGILGIKVKIM-----MDHDSSG 198
Query: 216 PAAEHRVVE 224
+ +
Sbjct: 199 KKGPRKPLP 207
>gi|260946855|ref|XP_002617725.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238849579|gb|EEQ39043.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 242
Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 45/211 (21%), Positives = 88/211 (41%), Gaps = 16/211 (7%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ L + G A + + +T+ +IV ++ ++G++G
Sbjct: 17 ADGVFYAEL-------NEFFTRELAEQGYAGVEVRKTNTKTEVIVKASNTQGVLGEQGRR 69
Query: 84 IEKIRK---KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ K + I + V + ++A + A+++ +L + RRA ++
Sbjct: 70 IHELTSLIVKRFKLPQDGIVIYAERVEERALSAAVQAEALKAKLLSGLPIRRAAYGVLRF 129
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
M GA GV+V+ SG+L A ++++ Y +G + Q R ID G GI
Sbjct: 130 TMAAGAKGVEVVISGKLRAA-RAKSQKYADGFMIHSGQPTREFIDTAIRHVLMRQGVLGI 188
Query: 199 KVYVSL---RDEVSDSDSTIPAAEHRVVEKD 226
+V + +++ E+D
Sbjct: 189 RVKIMRDPAKNKFGPKALPDAVMIAEYKEED 219
>gi|133907803|gb|ABO42361.1| ribosomal protein S3 [Bruguiera gymnorhiza]
Length = 480
Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + + +++K+R LSN TN+
Sbjct: 321 KVMELIEKFINLGRIGEL-IKGIEMMIEIILRNRKIPYGYNSYLNEMQKMRSLLSNRTNT 379
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ + ++ +A+ IAQ I+ QL ++ FR + V+ M+ G +G+++
Sbjct: 380 KTLIESVKIQSVYQSASPIAQDISFQLRNKKRSFRSIFTKIVKDIPLVMKKGVEGIRICC 439
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGR GAE++RTEC G+ L IDY A T YG
Sbjct: 440 SGRSEGAEIARTECGKYGKTSLNVFNQKIDYAPAEVSTRYG 480
>gi|130076566|gb|ABO31941.1| ribosomal protein S3 [Daphniphyllum sp. Qiu 94162]
Length = 471
Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 45/162 (27%), Positives = 77/162 (47%), Gaps = 5/162 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 310 KVIELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 368
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q +R FR + V+ M+ G +G+++
Sbjct: 369 NTLIESVKIKSVYQSASTIAQDISFQPRNKRRSFRSIFSKIVKDIPLVMKKGVEGIRICC 428
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGS 195
SGR GAE++RTEC G+ IDY A T YG
Sbjct: 429 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGI 470
>gi|322502154|emb|CBZ37237.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 342
Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 35/197 (17%), Positives = 78/197 (39%), Gaps = 13/197 (6%)
Query: 29 YGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR 88
Y L E+L+ L + G + + T I++ + + ++G G I ++
Sbjct: 140 YAELF-------EFLKRELAEEGFSGVSYHVTTLRTEIVIKATKTREVLGVNGRRIRELT 192
Query: 89 ---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG 145
++ N ++ L V V ++A +S+ +L + RRA ++ M G
Sbjct: 193 ACIQQRFNYKEGKLQLYVERVEVRGLSAMAQVESLRFKLLSNLQVRRAAMGIIRYVMESG 252
Query: 146 ADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
A G +V G++ G + +++ + +G + ++ +D G G+KV +
Sbjct: 253 AKGCEVTVGGKIKG-QRAKSMTFRDGYMIKSGTAHKSFVDSACRHCYMRAGCIGVKVKIM 311
Query: 204 LRDEVSDSDSTIPAAEH 220
L + + +
Sbjct: 312 LPGDSTGRNGPSEPLPD 328
>gi|133907869|gb|ABO42394.1| ribosomal protein S3 [Kiggelaria africana]
Length = 478
Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 7/162 (4%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 319 KVMELIEKFINLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 377
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLER-----RVVFRRAMKRAVQSAMRFGADGVKVI 152
+ ++ +A+ IAQ I+ QL R +F + MK + M+ G +G+++
Sbjct: 378 NTLIESVKIQSVYQSASPIAQDISFQLRNKTRSFRSIFSKIMKD-IPLVMKKGVEGIRIC 436
Query: 153 ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 437 CSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 478
>gi|133907863|gb|ABO42391.1| ribosomal protein S3 [Hugonia platysepala]
Length = 480
Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 44/163 (26%), Positives = 75/163 (46%), Gaps = 9/163 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + ++ + I + + G +++K+R LSN T
Sbjct: 321 KVMELIEKFRNLGRIGEL---KKGIEMMIEIILRNXRIPXGXNSYLXEMKKMRSLLSNRT 377
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+LIAQ I+ QL +R FR + V+ M+ G +G+++
Sbjct: 378 NTNTLIESVKIRSVYQSASLIAQDISFQLRNKRRSFRSIFSKIVKDIPLVMKKGVEGIRI 437
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGR GAE++RTEC G+ IDY A T YG
Sbjct: 438 CCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 480
>gi|133907921|gb|ABO42420.1| ribosomal protein S3 [Ricinus communis]
Length = 480
Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 321 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 379
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 380 NTLIESIKMKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 439
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 440 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 480
>gi|312232669|gb|ADQ53663.1| ribosomal protein S3 [Croton caracasanus]
Length = 472
Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 372 NTLIESVKMKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472
>gi|133907887|gb|ABO42403.1| ribosomal protein S3 [Microdesmis puberula]
Length = 467
Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 46/159 (28%), Positives = 76/159 (47%), Gaps = 5/159 (3%)
Query: 40 REYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEI 99
E + + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 310 MELIDKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNTNT 368
Query: 100 HLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASG 155
+ ++ +A+LIAQ I+ QL + FR + V+ M+ G +G+++ SG
Sbjct: 369 LIESVKIKSVYQSASLIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICCSG 428
Query: 156 RLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
RL GAE++RTEC G+ IDY A T YG
Sbjct: 429 RLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 467
>gi|302749089|gb|ADL64024.1| ribosomal protein S3 [Thymelaea hirsuta]
Length = 475
Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 9/162 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E + + G+ ++ + I + + G +++K++ LSN T
Sbjct: 317 KVMELIDKFINLGGIEEL---KKGIEVVIEIILRNRRIPYGYNSYLNEVKKMKSLLSNRT 373
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ QL + FR + V++ M+ G +G+++
Sbjct: 374 NTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKNIPLVMKKGVEGLRI 433
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAY 193
SGRL GAE++RTEC G+ IDY +A T Y
Sbjct: 434 CCSGRLKGAEIARTECGKYGKTSCNVFNQKIDYASAEVSTRY 475
>gi|11497487|ref|NP_042277.1| ribosomal protein S3 [Prototheca wickerhamii]
gi|1173303|sp|P46740|RT03_PROWI RecName: Full=Ribosomal protein S3, mitochondrial
gi|467878|gb|AAD12665.1| ribosomal protein S3 [Prototheca wickerhamii]
Length = 500
Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 5/144 (3%)
Query: 67 IVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLER 126
+ L+ + I LS+ N + L + +A IA I +ER
Sbjct: 357 NILGNSKSLVSRNQFKYKNYIENFLSSQYNIDSQLFPFISKQNWQSAGFIADEIVYFIER 416
Query: 127 RVVFRRAMKRAVQSA-MRFGADGVKVIASGRLNG----AELSRTECYLEGRVPLQTLRAH 181
RV F R R ++ A M+ G+++ SGR+ G A+ + EC G L
Sbjct: 417 RVSFSRIKNRILRQASMQSYVRGIRITCSGRVGGKSKKAQRATQECVKYGETSLHVFECK 476
Query: 182 IDYGTAVAETAYGSCGIKVYVSLR 205
ID+ + +A T++G GIKV++ +
Sbjct: 477 IDFASRIANTSFGLVGIKVWICFK 500
Score = 58.1 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 1 MGQKINPILFRL-GVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER 59
MGQK NPI RL VN ++S W++ Y DL + Y+ K + + +
Sbjct: 1 MGQKTNPISLRLQNVNRNFDSCWYSD-YFYAKCFSRDLYLNNYINTFFKLYRLPQARVCV 59
Query: 60 THKNCRIIVY 69
I VY
Sbjct: 60 NFGIQNIKVY 69
>gi|312232819|gb|ADQ53738.1| ribosomal protein S3 [Croton sellowii]
Length = 429
Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + R ++ K+R LSN TN+
Sbjct: 270 KVMELIEKFINLGRIGEL-IKGIEIMIEIILRNRRIPYGYNSYLNEMTKMRSLLSNRTNT 328
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+L ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 329 NTYLESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 388
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 389 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 429
>gi|133907883|gb|ABO42401.1| ribosomal protein S3 [Malpighia stevensii]
Length = 467
Score = 85.8 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + + +I+K+R LSN TN+
Sbjct: 308 KVMELIEKFINLGRIGEL-IKAIEMMIEIILRNRKIPYGYNSYLNEIQKMRSLLSNRTNT 366
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAM---KRAVQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL +R FR + + M+ G +G+++
Sbjct: 367 NTLIESVKIQSVYQSASPIAQDISFQLRNKRRSFRSIFSKRVKYIPLVMKKGVEGIRISC 426
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGR GAE++RTEC G+ IDY A T +G
Sbjct: 427 SGRSRGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRFG 467
>gi|312232639|gb|ADQ53648.1| ribosomal protein S3 [Astraea klotzschii]
Length = 470
Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 4/161 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E + G LI+ II+ + R +++K+R LSN TN+
Sbjct: 310 KLMELIIEKFINLGGIGELIKGIEMMIEIILRNRRIPYEYNSYLNEMKKMRSLLSNRTNT 369
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 370 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKDIPLVMKKGVEGIRISC 429
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 430 SGRLEGAEIARTECGKYGKTSRNVFYQKIDYAPAEVSTRYG 470
>gi|302748757|gb|ADL63859.1| ribosomal protein S3 [Gentiana macrophylla]
Length = 484
Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 5/162 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E+++ + + ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 324 KVMEFIEKFIDLGRIGEL-IKGIEMMIEIILKNRRIPYAYNSYLNEVKKMRSLLSNRTNT 382
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M+ G +GV++
Sbjct: 383 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVREIPLVMKKGVEGVRICC 442
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGS 195
SGRL GAE++RTEC G+ + IDY A T YG
Sbjct: 443 SGRLEGAEIARTECGKYGKTSRNVVNQKIDYAPAEVSTRYGI 484
>gi|133907823|gb|ABO42371.1| ribosomal protein S3 [Clutia myricoides]
Length = 482
Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 323 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMQKMRSLLSNRTNT 381
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 382 NTLIESVKIQSVYQSASTIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 441
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 442 SGRLEGAEIARTECGKYGKTSRNFFNQKIDYAPAEVSTRYG 482
>gi|133907937|gb|ABO42428.1| ribosomal protein S3 [Trichadenia zeylanica]
Length = 465
Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + R +++K+R LSN TN
Sbjct: 306 KVMELIEKFINLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNX 364
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + ++ M+ G +G+++
Sbjct: 365 NTLIESVKIQSVYQSASPIAQDISFQLRNKTRSFRSIFSQIIKDIPLVMKKGVEGIRICC 424
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 425 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 465
>gi|302748959|gb|ADL63959.1| ribosomal protein S3 [Pinus sp. Qiu 94013]
Length = 365
Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 46/143 (32%), Positives = 71/143 (49%), Gaps = 5/143 (3%)
Query: 65 RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQL 124
II+ + R ++ K+R LSN TN+ + ++ +A+ IAQ I+ QL
Sbjct: 224 EIILKNRRIPYGYNYYLNEVRKMRSLLSNRTNTNTLIGSVKILN-YQSASPIAQDISFQL 282
Query: 125 ERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRA 180
R FR + + V+ M G G+++ GRL GAE++RTEC G+ R
Sbjct: 283 RDRTRSFRSILSQIVRDIPLVMPKGVRGIRICRPGRLKGAEIARTECREYGKTSCNASRH 342
Query: 181 HIDYGTAVAETAYGSCGIKVYVS 203
ID+ +A T YG G+KV +S
Sbjct: 343 KIDHASAKVSTRYGILGVKVRIS 365
>gi|133907809|gb|ABO42364.1| ribosomal protein S3 [Carpotroche longifolia]
Length = 449
Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 42/163 (25%), Positives = 76/163 (46%), Gaps = 9/163 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ I + + + +++K+R LSN T
Sbjct: 290 KVMELIEKFINLGGIGEL---IKGIEMMIEIILRKRIIPYEYNSYLNEMKKMRSLLSNRT 346
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ QL+ + FR + ++ M+ G +G+++
Sbjct: 347 NTNTLIESVKIQSVYQSASPIAQDISFQLKNKTRSFRSIFSKIIKDIPLVMKKGVEGIRI 406
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 407 CCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 449
>gi|312232839|gb|ADQ53748.1| ribosomal protein S3 [Croton urucurana]
Length = 472
Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + + + M+ G +G+++
Sbjct: 372 NTLIESVKIQSVYQSASPIAQDISFQLRNKTRSFRSIYSKIVKDIPLVMKKGVEGIRICC 431
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472
>gi|312232697|gb|ADQ53677.1| ribosomal protein S3 [Croton ekmanii]
Length = 472
Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL G E++RTEC G+ IDY A T YG
Sbjct: 432 SGRLEGEEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472
>gi|118576057|ref|YP_875800.1| ribosomal protein S3 [Cenarchaeum symbiosum A]
gi|152060854|sp|A0RVX9|RS3_CENSY RecName: Full=30S ribosomal protein S3P
gi|118194578|gb|ABK77496.1| ribosomal protein S3 [Cenarchaeum symbiosum A]
Length = 261
Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 5/162 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN- 96
K+RE+L+ ++K +G + + +E+ + +I ++ RPG++IG+KG I ++ ++L +
Sbjct: 16 KLREFLRENIKDSGFSGVEVEKNPRGTKITLHVTRPGIVIGRKGVGIRELTERLEKDFDL 75
Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMR-FGADGVKVIASG 155
+ V E+ PE+ ++ +A +ER FRRA +Q M A GV++ SG
Sbjct: 76 KSPQVDVKEIETPELYPGVMCNRMASHIERGTAFRRATMWTIQQIMEKKDAMGVQITISG 135
Query: 156 RLNGAELSRTECYLEGRVPLQTLRAHIDY--GTAVAETAYGS 195
+L G + S E + G +P A + +T G
Sbjct: 136 KLRG-DRSAFEKHTSGILPRAGHYADVIVLDDVVHVKTPMGL 176
>gi|312232683|gb|ADQ53670.1| ribosomal protein S3 [Croton corylifolius]
gi|312232753|gb|ADQ53705.1| ribosomal protein S3 [Croton lundellii]
Length = 472
Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 372 NTLIESVKMKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472
>gi|312232641|gb|ADQ53649.1| ribosomal protein S3 [Astraea lobata]
Length = 470
Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 47/161 (29%), Positives = 74/161 (45%), Gaps = 4/161 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E + G LI+ II+ + R +++K+R LSN TN+
Sbjct: 310 KLMELIIDKFINLGGIGELIKGIEMMIEIILRNRRIPYEYNSYLNEMKKMRSLLSNRTNT 369
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 370 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKDIPLVMKKGVEGIRICC 429
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 430 SGRLEGAEIARTECGKYGKTSRNVFYQKIDYAPAEVSTRYG 470
>gi|133907831|gb|ABO42375.1| ribosomal protein S3 [Dicella nucifera]
Length = 468
Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + + +I+K+R LSN TN+
Sbjct: 309 KVMELIEKFINLGRIGEL-IKAIEMMIEIILRNRKIPYGYNSYLNEIQKMRSLLSNRTNT 367
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAM---KRAVQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL +R FR + + M+ G +G+++
Sbjct: 368 NTLIESVKIQSVYQSASPIAQDISFQLRNKRRSFRSIFSKRVKYIPLVMKKGVEGIRISC 427
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGR GAE++RTEC G+ IDY A T +G
Sbjct: 428 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRFG 468
>gi|133907829|gb|ABO42374.1| ribosomal protein S3 [Ctenolophon englerianus]
Length = 467
Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 9/163 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + + ++ I + + G +++K+R LSN T
Sbjct: 308 KVMELIEKFINLGRIGEL---IKGIEMMIEIILRNRRIPYGXNSYLNEMKKMRSLLSNRT 364
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 365 NTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRI 424
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGR GAE++RTEC G+ IDY A T YG
Sbjct: 425 CCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 467
>gi|312232649|gb|ADQ53653.1| ribosomal protein S3 [Croton alainii]
Length = 472
Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL G E++RTEC G+ IDY A T YG
Sbjct: 432 SGRLEGEEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472
>gi|312232741|gb|ADQ53699.1| ribosomal protein S3 [Croton leonis]
Length = 472
Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 9/163 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ I + + + G +++K+R LSN T
Sbjct: 313 KVMELIEKFINLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEMKKMRSLLSNRT 369
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 370 NTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRI 429
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL G E++RTEC G+ IDY A T YG
Sbjct: 430 CCSGRLEGEEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472
>gi|308498826|ref|XP_003111599.1| CRE-RPS-3 protein [Caenorhabditis remanei]
gi|308239508|gb|EFO83460.1| CRE-RPS-3 protein [Caenorhabditis remanei]
Length = 255
Score = 85.4 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 40/216 (18%), Positives = 82/216 (37%), Gaps = 31/216 (14%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT----- 95
+L L + G + + + T +I+ + R ++G++G I+++ +
Sbjct: 25 NFLMKELAEDGYSGVEVRSTPARAEVIIMATRTQNVLGERGRRIKELTSVVQKRFAFEEG 84
Query: 96 ------NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGV 149
+ L +V + A +S+ +L + RRA ++ M GA GV
Sbjct: 85 SVEVKFSFRNLLYAEKVSNRGLCAVAQCESLRYKLVGGLAVRRACYGVLRFIMESGAQGV 144
Query: 150 KVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR-- 205
+VI SG+L G + ++ +++G + + +I + G GIKV + L
Sbjct: 145 EVIVSGKLRG-QRAKAMKFVDGLMIHSGHPVNDYIQQAVRHVQLRQGVIGIKVKIMLPYD 203
Query: 206 ---------------DEVSDSDSTIPAAEHRVVEKD 226
V + IP H +++
Sbjct: 204 PRGQNGPRIALPDHVQIVEPQEEVIPKEPHSQHKEE 239
>gi|302748601|gb|ADL63781.1| ribosomal protein S3 [Byblis liniflora]
Length = 471
Score = 85.4 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 75/165 (45%), Gaps = 9/165 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + + ++ I + + + G +++K+R LSN T
Sbjct: 310 KVMELIEKFIDLGRIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEVKKMRSFLSNRT 366
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ QL +R FR + V++ M+ G G+++
Sbjct: 367 NTNTLMESVKIQSLYQSASPIAQDISFQLRTKRRSFRSIFSQIVKNIPSVMKRGVTGIRI 426
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196
SGR GA+++RTEC G+ IDY A T +G
Sbjct: 427 CCSGRSEGAKIARTECGKYGKTSRNVFNQKIDYAPAEVSTRFGIL 471
>gi|133907893|gb|ABO42406.1| ribosomal protein S3 [Ochna multiflora]
Length = 431
Score = 85.4 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 44/163 (26%), Positives = 78/163 (47%), Gaps = 9/163 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ +K G+ ++ I + + + G +++K+R LSN T
Sbjct: 272 KVMELIEKFIKLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLNEMKKMRSLLSNRT 328
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ +AQ I+ QL ++ FR + V+ M+ G +G+++
Sbjct: 329 NTTTLIESVKIKSVYQSASPLAQDISFQLRNKKRSFRSIFSKIVKDIPLVMKKGVEGIRI 388
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGR GAE++RTEC G+ IDY TA T YG
Sbjct: 389 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYATAEVATRYG 431
>gi|133907815|gb|ABO42367.1| ribosomal protein S3 [Celastrus orbiculatus]
Length = 464
Score = 85.4 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 9/163 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ I + + + G +++K+R LSN T
Sbjct: 305 KVMELIEKFINLGGIGEL---IKGIEMMIEIILRKRKIPYGYNSYLNEVKKMRSLLSNRT 361
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
+ + ++ +A+ IAQ I+ QL + FR + V+ M+ G G+++
Sbjct: 362 KTNTLIESVKIKDVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKDIPLVMKKGVQGIRI 421
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGR GAE++RTEC G+ IDY A T YG
Sbjct: 422 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 464
>gi|133907817|gb|ABO42368.1| ribosomal protein S3 [Cespedesia spathulata]
Length = 426
Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ +K G+ ++ I+ II+ R +I+K+R LSN TN+
Sbjct: 267 KVMELIEKFIKLGGIGEL-IKGIEMMIEIILRKKRIPYGYNSYLNEIKKMRSLLSNRTNT 325
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ +AQ I+ QL ++ FR + V+ M+ G +G+++
Sbjct: 326 TTLIESVKIKSVYQSASPLAQDISFQLRNKKRSFRSIFSKIVKDIPLVMKKGVEGIRISC 385
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGR GAE++RTEC G+ IDY TA T YG
Sbjct: 386 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYATAEVATRYG 426
>gi|133907793|gb|ABO42356.1| ribosomal protein S3 [Balanops vieillardii]
Length = 481
Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 322 KVMELIEKFINLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 380
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 381 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 440
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGR GAE++RTEC G+ IDY A T YG
Sbjct: 441 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 481
>gi|312232693|gb|ADQ53675.1| ribosomal protein S3 [Croton discolor]
gi|312232703|gb|ADQ53680.1| ribosomal protein S3 [Croton flavens]
gi|312232731|gb|ADQ53694.1| ribosomal protein S3 [Croton impressus]
Length = 472
Score = 85.0 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RT+C G+ IDY A T YG
Sbjct: 432 SGRLEGAEIARTKCGKYGKTSRNVFNQKIDYAPAEVSTRYG 472
>gi|133907927|gb|ABO42423.1| ribosomal protein S3 [Sauvagesia erecta]
Length = 431
Score = 85.0 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ LK G+ ++ I+ II+ R +++K+R LSN TN+
Sbjct: 272 KVMELIEKFLKLGGIGEL-IKGIEMMIEIILRKKRIPYGYNSYLNEMKKMRSLLSNRTNT 330
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ +AQ I+ QL ++ FR + V+ M+ G +G+++
Sbjct: 331 TTLIESVKIQSVYQSASPLAQDISFQLRNKKKSFRSIFSKIVKDIPLVMKKGVEGIRISC 390
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGR GAE++RTEC G+ IDY TA T YG
Sbjct: 391 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYATAEVATRYG 431
>gi|183013841|gb|ACC38439.1| ribosomal protein S3 [Phytophthora ramorum]
Length = 260
Score = 85.0 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 49/239 (20%), Positives = 90/239 (37%), Gaps = 46/239 (19%)
Query: 12 LGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--HLKQAGVAKILIERTHKNCRIIVY 69
L WNS+W +EY LLH DL+I++Y + + K + I I +T KN + VY
Sbjct: 1 LNKKKNWNSKWIVNNNEYSNLLHFDLEIKKYFENIFNYKNLKLIDINIVKTSKNINVYVY 60
Query: 70 SARPGLIIGK--------------KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEI---- 111
+ +I+ K ++ ++ ++
Sbjct: 61 IQKNAKKYYNLSYNKIINHLNLYYPNNNIKLFIKNTQFFEFLKLRKNLKQIFDKIKKNNK 120
Query: 112 -------------------NATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGAD----- 147
N +I I Q LER+ ++ + + + ++
Sbjct: 121 INKNVKKMIYNFSYAFYTKNINIITFYIKQTLERKKTHKKFINN-IDNMLQEFFKMFSNF 179
Query: 148 -GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
G ++ GRLN ++ + + +G++PL TL I Y +T G C IK++V +
Sbjct: 180 IGYRLQFKGRLNKSKRKKKMVFQKGKIPLNTLEYDIKYHFNEFKTPSGICSIKLWVFFK 238
>gi|312232795|gb|ADQ53726.1| ribosomal protein S3 [Croton peraeruginosus]
Length = 472
Score = 85.0 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RT C G+ IDY A T YG
Sbjct: 432 SGRLEGAEIARTACGKYGKTSRNVFNQKIDYAPAEVSTRYG 472
>gi|241865275|gb|ACS68715.1| 40S RPS3B [Sonneratia alba]
gi|241865508|gb|ACS68786.1| RPS3B [Sonneratia alba]
Length = 156
Score = 85.0 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 6/147 (4%)
Query: 63 NCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
II+ + R ++G+KG I ++ +K + + L +V + A A+S
Sbjct: 2 RTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAES 61
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQT 177
+ +L + RRA ++ M GA G +VI SG+L A+ +++ + +G + Q
Sbjct: 62 LRYKLLGGLAVRRACYGVLRFVMDSGAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQP 120
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSL 204
+ +ID G GIKV + L
Sbjct: 121 VNEYIDSAVRHVLLRQGVLGIKVKIML 147
>gi|302748792|gb|ADL63876.1| ribosomal protein S3 [Humiria balsamifera]
Length = 470
Score = 84.7 bits (208), Expect = 8e-15, Method: Composition-based stats.
Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 312 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 370
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 371 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKRGVEGIRICC 430
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAY 193
SGR GAE++RTEC G+ IDY A T Y
Sbjct: 431 SGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRY 470
>gi|226348816|gb|ACO50720.1| ribosomal protein S3 [Micromonas pusilla CCMP1545]
Length = 310
Score = 84.7 bits (208), Expect = 8e-15, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 86 KIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLE--RRVVFRRAMKRAVQS-AM 142
+ LS T +++ V ++ +A+ +A +A Q E R+ FR + V
Sbjct: 187 HVEAILSKTTGTQVVWEVYKMKHVFSSASFVAHYMAIQFETQRKKPFRAIFEDVVSKCIK 246
Query: 143 RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202
GV+V+ +GR+ A + T+ G+ L IDY + A + G GIKV++
Sbjct: 247 HAHIVGVRVVIAGRIRNAAKASTQMAKYGQTSLHVFSHAIDYASTSAHSKNGLLGIKVWL 306
Query: 203 SL 204
S
Sbjct: 307 SY 308
Score = 44.2 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 33/89 (37%), Gaps = 1/89 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
M QKI P RL N + W Y LLH +I + + +Q G+ +
Sbjct: 1 MAQKIGPASLRLWTNKEVHGLW-MGSVTYTELLHTGERIHTFCERLFRQLGLRGSMTHVQ 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRK 89
N R+++ S P K + +
Sbjct: 60 ASNHRLLIQSFVPKPSAMHKKFRHKGFHR 88
>gi|312232847|gb|ADQ53752.1| ribosomal protein S3 [Croton ynesae]
Length = 471
Score = 84.7 bits (208), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 312 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 370
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 371 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 430
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RT C G+ IDY A T YG
Sbjct: 431 SGRLEGAEIARTXCGKYGKTSRNVFNQKIDYAPAEVSTRYG 471
>gi|312232759|gb|ADQ53708.1| ribosomal protein S3 [Croton megistocarpus]
Length = 472
Score = 84.7 bits (208), Expect = 8e-15, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 313 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 371
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 372 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 431
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 432 SGRLEGAEIARTECGKYGKTSRNVNNQKIDYAPAEVSTRYG 472
>gi|183013835|gb|ACC38435.1| ribosomal protein S3 [Phytophthora ramorum]
Length = 260
Score = 84.7 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 50/239 (20%), Positives = 90/239 (37%), Gaps = 46/239 (19%)
Query: 12 LGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--HLKQAGVAKILIERTHKNCRIIVY 69
L WNS+W +EY LLH DL+I++Y Q + K + I I +T KN + VY
Sbjct: 1 LNKKKNWNSKWIVNNNEYSNLLHFDLEIKKYFQNIFNYKNLKLIDINIIKTSKNINVYVY 60
Query: 70 SARPGLIIGK--------------KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEI---- 111
+ +I+ K ++ ++ ++
Sbjct: 61 IQKNAKKYYNLSYNKIINHLNLYYPNNNIKLFIKNTQFFEFLKLRKNLKQIFDKIKKNNK 120
Query: 112 -------------------NATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGAD----- 147
N +I I Q LER+ ++ + + + ++
Sbjct: 121 INKNVKKMIYNFSYAFYTKNINIITFYIKQTLERKKTHKKFINN-IDNMLQEFFKMFSNF 179
Query: 148 -GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
G ++ GRLN ++ + + +G++PL TL I Y +T G C IK++V +
Sbjct: 180 IGYRLQFKGRLNKSKRKKKMVFQKGKIPLNTLEYDIKYHFNEFKTPSGICSIKLWVFFK 238
>gi|133907881|gb|ABO42400.1| ribosomal protein S3 [Malesherbia linearifolia]
Length = 481
Score = 84.7 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 4/156 (2%)
Query: 43 LQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLS 102
L + G I+ II+ + R +I K+R LSN TN+ +
Sbjct: 326 LIDKFRNLGRIGEFIKGIEMMIEIILRNRRIPYGYNSYFNEITKMRSLLSNRTNTNTLIE 385
Query: 103 VNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGRLN 158
++ +A+LIAQ I+ QL + FR + V+ M+ G G+++ SGRL
Sbjct: 386 SVKIQSVYQSASLIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVGGIRICCSGRLE 445
Query: 159 GAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
GAE++RTEC G+ L IDY A T YG
Sbjct: 446 GAEIARTECGKYGKTSRNVLYQKIDYAPAEVSTRYG 481
>gi|327195225|ref|YP_004339007.1| ribosomal protein S3 [Coccomyxa sp. C-169]
gi|325070721|gb|ADY75449.1| ribosomal protein S3 [Coccomyxa sp. C-169]
Length = 472
Score = 84.7 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 4/136 (2%)
Query: 74 GLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRA 133
+ + I + L + + + + E A +++ IA LERRV FRR
Sbjct: 337 EIRKQGNHSSISTMEAVLGRGLGLSVAMYPYKSMEEEQTARFLSEEIAYYLERRVPFRRI 396
Query: 134 MKRAVQSAMRFGADGVKVIASGRLNG----AELSRTECYLEGRVPLQTLRAHIDYGTAVA 189
+ ++ + +GVKV SGR+ G A+ SR E + G+ + + + + A
Sbjct: 397 KQALMRELQKRYIEGVKVSCSGRVGGRSKKAQRSREEGFQWGQTSSHVFSSKLGFASRSA 456
Query: 190 ETAYGSCGIKVYVSLR 205
T +G GIKV++ +
Sbjct: 457 LTPFGKVGIKVWICYK 472
Score = 67.3 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 1 MGQKINPILFRLG-VNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER 59
MGQK NPI RL N +++S W++ Y LL D+K R YL +Q K L+
Sbjct: 1 MGQKANPISLRLKTTNKSFDSCWYSYL-HYSTLLSLDIKARSYLDKIFEQIRYPKPLVAL 59
Query: 60 T--HKNCRIIVYSARPGLIIGKKGTDIE 85
T K ++++ P G++G +
Sbjct: 60 TLMPKRGKVLMLYLNPERSRGERGERFQ 87
>gi|272716695|gb|ACZ95649.1| ribosomal protein S3 [Larix gmelinii var. principis-rupprechtii]
Length = 564
Score = 84.7 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 7/148 (4%)
Query: 63 NCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I + + G ++ K+R LSN TN+ + ++ +A+ IAQ I
Sbjct: 417 GMMIEIILRNRRIPYGYNYYLNEVRKMRSLLSNRTNTNTLIGSVKILN-YQSASPIAQDI 475
Query: 121 AQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
+ Q R FR + + V+ M G G+++ GR GAE++RTEC G+
Sbjct: 476 SFQPRDRTRSFRSILSQIVRDIPLVMPKGVRGIRICRPGRSKGAEIARTECREYGKTSCN 535
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSL 204
R ID+ +A T YG G+KV +S
Sbjct: 536 ASRHKIDHASAKVSTRYGILGVKVRISF 563
Score = 58.9 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 42/89 (47%), Gaps = 7/89 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYL------QCHLKQAGVAK 54
M +K+NPI RL +N + + WF+ YG L+++D+ +R+Y + +
Sbjct: 1 MARKVNPISVRLNLNRSSDPSWFSDYY-YGKLVYQDVNLRDYFGSIRPPTRKTFGFRLGR 59
Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTD 83
+I + K I ++ R + ++G
Sbjct: 60 CIIHHSPKRTFIHLFLPRRPQRLKRRGRS 88
>gi|229594319|ref|XP_001030083.3| KH domain containing protein [Tetrahymena thermophila]
gi|319443358|pdb|2XZM|C Chain C, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
In Complex With Initiation Factor 1. This File Contains
The 40s Subunit And Initiation Factor For Molecule 1
gi|319443393|pdb|2XZN|C Chain C, Crystal Structure Of The Eukaryotic 40s Ribosomal Subunit
In Complex With Initiation Factor 1. This File Contains
The 40s Subunit And Initiation Factor For Molecule 2
gi|225566935|gb|EAR82420.3| KH domain containing protein [Tetrahymena thermophila SB210]
gi|315570297|tpg|DAA33967.1| TPA_exp: 40S ribosomal protein rpS3e [Tetrahymena thermophila]
Length = 243
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 39/180 (21%), Positives = 81/180 (45%), Gaps = 6/180 (3%)
Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIG---KKGTDIEKIRKKLSNMT 95
+ + L+ AG A I + RT I + + +P +IG KK ++ + +K +
Sbjct: 24 LHSFFSKSLQDAGYAGIEVRRTPTKTEIRIKATKPQQVIGVEGKKHKELTQFLQKRFGYS 83
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155
+ +I + + + A+ +++ +L + V R A ++S ++ GA G ++I SG
Sbjct: 84 DDQIQIWAEPIKFKGLCASAQVEAMNYKLLKDVPVRLAANYIIKSVIQDGAKGCEIIISG 143
Query: 156 RLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
+L + ++T + +G + Q +ID G G+KV + L E + +
Sbjct: 144 KLK-QQRAKTMKFKQGYMICTGQPKNDYIDVAVRHVFFKQGIMGVKVKIMLPYEPNPAKK 202
>gi|302748854|gb|ADL63907.1| ribosomal protein S3 [Lonicera sp. Qiu 05010]
Length = 470
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E + + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 311 KVMELIDKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 369
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + + FR + V+ M+ G +G+++
Sbjct: 370 NTLIESVKIKSVYQSASPIAQDISFQPKNKTRSFRSIFSQIVKDIPLVMKKGVEGIRICC 429
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGR GAE++RTEC G+ IDY A T YG
Sbjct: 430 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 470
>gi|302748963|gb|ADL63961.1| ribosomal protein S3 [Pittosporum tobira]
Length = 473
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 75/161 (46%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN T +
Sbjct: 314 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTKT 372
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++
Sbjct: 373 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIPLVMKKGVEGIRICC 432
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGR GAE++RTEC G+ IDY A T YG
Sbjct: 433 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 473
>gi|133907911|gb|ABO42415.1| ribosomal protein S3 [Podocalyx loranthoides]
Length = 467
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN
Sbjct: 308 KVMELIEKFINLGGIGEL-IKGIEMMIEIILKNRRIPYGYNSYLNEMKKMRSLLSNRTNQ 366
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+LIAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 367 NTLIESVKIQSVYQSASLIAQDISFQLRNKTREFRSIFSKIVKDIPLVMKKGVEGIRICC 426
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ I Y A T YG
Sbjct: 427 SGRLEGAEIARTECGKYGKTSRNVFNQKIYYAPAEVSTRYG 467
>gi|133907847|gb|ABO42383.1| ribosomal protein S3 [Euonymus alatus]
Length = 466
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 74/163 (45%), Gaps = 9/163 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ I + + + G +++K+R LSN T
Sbjct: 307 KVMELIEKFINLGGIGEL---IKGIEMMIEIILRKRKIPYGYNFYLNEVKKMRSLLSNRT 363
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKV 151
+ + ++ +A+ IAQ I+ QL + FR + + + M+ G +G+++
Sbjct: 364 KTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSILSKIVKDIPLVMKKGVEGIRI 423
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGR GAE++RTEC G+ IDY A T YG
Sbjct: 424 CCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 466
>gi|130076578|gb|ABO31947.1| ribosomal protein S3 [Kalanchoe pinnata]
Length = 236
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 9/165 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ + I + + G +++K+R LSN T
Sbjct: 75 KVMELIEKFIDLGGIGEF---LKGIEMMIEIILRNKRIPYGYNYYLNEVQKMRSLLSNRT 131
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++
Sbjct: 132 NTNTLIQSVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRI 191
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196
SGR GAE++RTEC G+ IDY A T YG
Sbjct: 192 CCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGIF 236
>gi|294875936|ref|XP_002767474.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239869132|gb|EER00192.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 261
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 46/212 (21%), Positives = 83/212 (39%), Gaps = 24/212 (11%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E L L + G + + + T II+ + R ++G+KG
Sbjct: 18 ADGVFYAEL-------NELLTTILAEDGYSGVEVRVTPIKTEIIIRATRTREVLGEKGRR 70
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ ++ + + + L V + A A+S+ +L + RRA ++
Sbjct: 71 IRELTALVERRFDFPENSVELFAERVDNRALCAQAQAESLRYKLLGGLPVRRAAYGVLRF 130
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH---IDYGTAVAETAYGSCG 197
M GA GV+V SG+L A+ ++ + +G + L T +D + G G
Sbjct: 131 VMENGAKGVEVTVSGKLR-AQRAKVMKFADGYL-LSTGTPKEMYVDQAIRNVDMRQGILG 188
Query: 198 IKVYVSL---------RDEVSDSDSTIPAAEH 220
I+V + + D TI +
Sbjct: 189 IRVKIMMAYDPEGKSGPKTRLPDDITIHEPKE 220
>gi|145345927|ref|XP_001417450.1| Ribosomal protein S3, component of cytosolic 80S ribosome and 40S
small subunit [Ostreococcus lucimarinus CCE9901]
gi|144577677|gb|ABO95743.1| Ribosomal protein S3, component of cytosolic 80S ribosome and 40S
small subunit [Ostreococcus lucimarinus CCE9901]
Length = 231
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 76/169 (44%), Gaps = 6/169 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E L L + G + + + +T II+ + R ++G+KG I ++ ++ M
Sbjct: 24 EMLVRELAEDGYSGVEVRQTPMRTEIIIRATRTANVLGEKGRRIRELTTLVQRRFQMAEG 83
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L V + A +S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 84 SVELYAERVNNRGLCAIAQCESLRYKLLGGLAVRRACYGVLRYIMEAGAKGAEVVVSGKL 143
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
G + ++ + +G + +R +I T A G+ G++V + L
Sbjct: 144 RG-QRAKAMKFKDGYMISSGNPVREYIVSCTRHALLRQGTIGMRVKIML 191
>gi|294932119|ref|XP_002780125.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239890023|gb|EER11920.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 261
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 46/212 (21%), Positives = 83/212 (39%), Gaps = 24/212 (11%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E L L + G + + + T II+ + R ++G+KG
Sbjct: 18 ADGVFYAEL-------NELLTTILAEDGYSGVEVRVTPIKTEIIIRATRTREVLGEKGRR 70
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ ++ + + + L V + A A+S+ +L + RRA ++
Sbjct: 71 IRELTALVERRFDFPENSVELFAERVDNRALCAQAQAESLRYKLLGGLPVRRAAYGVLRF 130
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH---IDYGTAVAETAYGSCG 197
M GA GV+V SG+L A+ ++ + +G + L T +D + G G
Sbjct: 131 VMENGAKGVEVTVSGKLR-AQRAKVMKFADGYL-LSTGTPKEMYVDQAIRNVDMRQGILG 188
Query: 198 IKVYVSL---------RDEVSDSDSTIPAAEH 220
I+V + + D TI +
Sbjct: 189 IRVKIMMAYDPEGKSGPKTRLPDDITIHEPKE 220
>gi|288191120|gb|ADC43913.1| ribosomal protein S3 [Bhesa archboldiana]
Length = 451
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 4/161 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + LI+ II+ ++R +++K+R LSN T +
Sbjct: 291 KVMELIEKFINLGRGIGELIKGIEMMIEIILRNSRIPYGYNSYLNEMKKMRSLLSNRTKT 350
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G G+++
Sbjct: 351 NTLIESVKIQSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVPGIRICC 410
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGR GA+++RTEC + IDY A T YG
Sbjct: 411 SGRSKGAKIARTECGKYRKTSRNVFNQKIDYAPAEVSTRYG 451
>gi|133907853|gb|ABO42386.1| ribosomal protein S3 [Galearia filiformis]
Length = 466
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 40 REYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEI 99
E + + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 309 MELIDKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNTNT 367
Query: 100 HLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASG 155
+ ++ +A+LIAQ I+ QL + FR + V+ M+ G +G+++ SG
Sbjct: 368 LIESVKIQSVYQSASLIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICCSG 427
Query: 156 RLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
R GAE++RTEC G+ IDY A T YG
Sbjct: 428 RSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 466
>gi|133907813|gb|ABO42366.1| ribosomal protein S3 [Casearia sylvestris]
Length = 480
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E + + G+ ++ I II+ + R +++K+R LSN TN+
Sbjct: 321 KVMELIDKFINLGGIGEL-IRGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 379
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 380 NTLIESVKMKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 439
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 440 SGRLKGAEIARTECGKYGKTSRNVFYQKIDYAPAEVSTRYG 480
>gi|302748663|gb|ADL63812.1| ribosomal protein S3 [Connarus championii]
Length = 469
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 311 KVMELIEKLINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 369
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQ---SAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR ++ V+ M+ G G+++
Sbjct: 370 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFRKIVKGIPLVMKKGVSGIRICC 429
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAY 193
SGR GAE++RTEC G+ IDY A T Y
Sbjct: 430 SGRSEGAEIARTECGKYGKTSRNLFNQKIDYAPAEVSTRY 469
>gi|133907845|gb|ABO42382.1| ribosomal protein S3 [Erythroxylum coca]
Length = 480
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ I++ + + +++K+R LSN TN+
Sbjct: 321 KVMELIEKFINLGRIGEL-IKGIEMLIEILLRNRKIPYGYNSYLNEMKKMRSLLSNRTNT 379
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL ++ FR + V+ M+ G +G+++
Sbjct: 380 NTLIESVKIQSVYQSASPIAQDISFQLRNKKRSFRSIFSKIVKDIPLVMKKGVEGIRICC 439
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGR GAE++RTEC G+ L IDY A T YG
Sbjct: 440 SGRSEGAEIARTECGKYGKTSRNVLNQKIDYAPAEVSTRYG 480
>gi|312232851|gb|ADQ53754.1| ribosomal protein S3 [Croton zambesicus]
Length = 472
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 9/163 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ + I + + G +++K+R LSN T
Sbjct: 313 KVMELIEKCINLGGIGE---WIKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRT 369
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 370 NTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRI 429
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 430 CCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 472
>gi|133907925|gb|ABO42422.1| ribosomal protein S3 [Sapria himalayana]
Length = 477
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/160 (27%), Positives = 79/160 (49%), Gaps = 5/160 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ + ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 320 KVMKLIEKLINLGGIGEL-IKGIEMMIEIILRNIRIPYGYNSYLNEMQKMRSLLSNRTNT 378
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERR---VVFRRAMKRAVQSAMRFGADGVKVIAS 154
+ ++ +A+ IAQ I+ QL ++ +F + +K + M+ G +G+++ S
Sbjct: 379 NTLIESVKIQSVYQSASPIAQDISFQLRKKTSPYIFSQIVKD-IPLVMKKGVEGIRICCS 437
Query: 155 GRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
GRL GAE +RTEC G+ IDY A T YG
Sbjct: 438 GRLEGAERARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 477
>gi|302748579|gb|ADL63770.1| ribosomal protein S3 [Berzelia lanuginosa]
Length = 484
Score = 83.9 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 9/163 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ I + + + G +++K+R LSN T
Sbjct: 325 KVMELIEKFIDLGGIGELRRGI---EMMIEILLRKKRIPYGYNSYLNEVKKMRSLLSNRT 381
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++
Sbjct: 382 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRI 441
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 442 CCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 484
>gi|133907891|gb|ABO42405.1| ribosomal protein S3 [Neoscortechinia kingii]
Length = 479
Score = 83.9 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 77/161 (47%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 320 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 378
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 379 NTLIESVKIQSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRISC 438
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE+ RTEC G+ IDY A T YG
Sbjct: 439 SGRLEGAEIVRTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 479
>gi|133907825|gb|ABO42372.1| ribosomal protein S3 [Codiaeum variegatum]
Length = 448
Score = 83.9 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 48/172 (27%), Positives = 81/172 (47%), Gaps = 6/172 (3%)
Query: 27 SEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEK 86
+ LL +D K+ E ++ + G+ ++ E I++ R L +++K
Sbjct: 279 RRFRNLLGKD-KVLELVEKLINLGGIGELGKEI-EMMIEIVLRYRRLRLPYNSYLNEMKK 336
Query: 87 IRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSAMR-- 143
+R LSN TN+ I + ++ +A+ IAQ I+ +L + FR + V+
Sbjct: 337 MRSLLSNRTNTNILIESVKIQSVYQSASPIAQDISLKLRNKTRSFRSIFSQIVKDIPNGM 396
Query: 144 -FGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
G +G+++ SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 397 KKGVEGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 448
>gi|312232675|gb|ADQ53666.1| ribosomal protein S3 [Croton cordiifolius]
Length = 414
Score = 83.5 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 47/169 (27%), Positives = 81/169 (47%), Gaps = 12/169 (7%)
Query: 38 KIREYLQCHLKQAGVAK------ILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRK 89
K+ E ++ + + + ++IE +N RI++ + +++K+R
Sbjct: 246 KVMELIEKFINLGRIGELIKGIEMMIEIILRNRRILIVKRNRRIPYRYNSYLYEMKKMRS 305
Query: 90 KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFG 145
LSN TN+ +L ++ +A+ IAQ I+ QL + FR + V+ M+ G
Sbjct: 306 LLSNRTNTNTYLESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKG 365
Query: 146 ADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
+G+++ SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 366 VEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 414
>gi|133907899|gb|ABO42409.1| ribosomal protein S3 [Paropsia madagascariensis]
Length = 464
Score = 83.5 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 44/160 (27%), Positives = 71/160 (44%), Gaps = 6/160 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSE 98
+ ++ K + +I I + + G ++ K+R LSN TN+
Sbjct: 305 KVIELIEKFRNLGRIGELIKGIEMMIEIILRNRIIPYGYNSYLNEMTKMRSLLSNRTNTN 364
Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIAS 154
+ ++ + A+LIAQ I+ QL + FR + V+ M+ G G+++ S
Sbjct: 365 TLIESVKIQSVYLCASLIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVGGIRICCS 424
Query: 155 GRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
GRL GAE++RTEC G+ IDY A T YG
Sbjct: 425 GRLEGAEIARTECGKYGKTSRNVFYQKIDYAPAEVSTRYG 464
>gi|312232757|gb|ADQ53707.1| ribosomal protein S3 [Croton matourensis]
Length = 443
Score = 83.5 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E + + + ++ I+ II+ + R + K+R LSN TN+
Sbjct: 284 KVMELIDKFINLGRIGEL-IKGIEMMIEIILRNRRIPYGYSSYLNKMTKMRSLLSNRTNT 342
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+L ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 343 NTYLESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKDIPLVMKKGVEGIRICC 402
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 403 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 443
>gi|302748719|gb|ADL63840.1| ribosomal protein S3 [Ehretia anacua]
Length = 470
Score = 83.5 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/162 (25%), Positives = 75/162 (46%), Gaps = 5/162 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + R +++K+R LSN T++
Sbjct: 310 KVMELIEKFIDLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTST 368
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++
Sbjct: 369 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 428
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGS 195
SGR GAE++RTEC G+ IDY A T YG
Sbjct: 429 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYGI 470
>gi|133907889|gb|ABO42404.1| ribosomal protein S3 [Monotaxis megacarpa]
Length = 478
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 76/161 (47%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 319 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 377
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSAMRFGAD---GVKVIA 153
+ + ++ +A+ IAQ I+ QL + FR + + V+ G+++
Sbjct: 378 KTLIESIKMKSVYQSASPIAQDISFQLRNKTRSFRSILTKIVKDIPLVMKKRVEGIRICC 437
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 438 SGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 478
>gi|310771967|emb|CBH28921.1| 40S ribosomal protein S3 [Anncaliia algerae]
Length = 216
Score = 83.1 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 38/171 (22%), Positives = 75/171 (43%), Gaps = 8/171 (4%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD---IEKIRKKLSNMTNS 97
E+ LK+ G + I+ +I + +P ++G K + I+ + + + +S
Sbjct: 23 EFFSIELKEEGYGGMDIKLHEMPVQITIRVNKPEDVMGDKKSRLNLIKHLLMQRFPLLSS 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ ++V + + A I +L + FRRA+ A++S GA G +I SG+L
Sbjct: 83 GVEINVEMIKNKGLCPMTQADFIRVKLFSGIPFRRAVHAAMKSIKDGGAQGCVIIISGKL 142
Query: 158 NGAELSRTECYLEGRVPLQTLRA---HIDYGTAVAETAYGSCGIKVYVSLR 205
G + +++ Y +G + + T + + G GIKV + L
Sbjct: 143 KG-QRAKSVKYQQGLM-IHTGNDRKLFVKEAISTVLLKQGVIGIKVKIMLP 191
>gi|183013838|gb|ACC38437.1| ribosomal protein S3 [Phytophthora ramorum]
gi|183013844|gb|ACC38441.1| ribosomal protein S3 [Phytophthora ramorum]
Length = 260
Score = 83.1 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 48/239 (20%), Positives = 89/239 (37%), Gaps = 46/239 (19%)
Query: 12 LGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--HLKQAGVAKILIERTHKNCRIIVY 69
L WNS+W +EY LLH DL+I++Y + + K + I I +T KN + VY
Sbjct: 1 LNKKKNWNSKWIVNNNEYSNLLHFDLEIKKYFENIFNYKNLKLIDINIIKTSKNINVYVY 60
Query: 70 SARPGLIIGK--------------KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEI---- 111
+ +I+ K ++ ++ ++
Sbjct: 61 IQKNAKKYYNLSYNKIINHLNLYYPNNNIKLFIKNTQFFEFLKLRKNLKQIFDKIKKNNK 120
Query: 112 -------------------NATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGAD----- 147
N +I I Q LER+ ++ + + + ++
Sbjct: 121 INKNVKKMIYNFSYAFYTKNINIITFYIKQTLERKKTHKKFINN-IDNMLQEFFKMFSNF 179
Query: 148 -GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
G ++ GRLN ++ + + +G++PL TL I Y +T G C IK++ +
Sbjct: 180 IGYRLQFKGRLNKSKRKKKMVFQKGKIPLNTLEYDIKYHFNEFKTPSGICSIKLWFFFK 238
>gi|6540574|gb|AAF16402.1| ribosomal protein RPS3 [Musca domestica]
Length = 165
Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 70/160 (43%), Gaps = 8/160 (5%)
Query: 52 VAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPK 108
+ + T II+ + + ++G+KG I ++ + + I L +V
Sbjct: 1 TPGVEVRVTPARTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFSFEPGRIELYAEKVAT 60
Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168
+ A A+S+ +L + RRA ++ M GA G +V+ SG+L G + +++ +
Sbjct: 61 RGLCAIAQAESLRYKLTGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG-QRAKSMKF 119
Query: 169 LEGRVPLQTLRAHIDY---GTAVAETAYGSCGIKVYVSLR 205
++G + + + DY T G GIKV + L
Sbjct: 120 VDGLM-IHSGDPCNDYVETATRHVLLRQGVLGIKVKIMLP 158
>gi|326901586|gb|AEA10071.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901588|gb|AEA10072.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901590|gb|AEA10073.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901592|gb|AEA10074.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901594|gb|AEA10075.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901596|gb|AEA10076.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901598|gb|AEA10077.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901600|gb|AEA10078.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901604|gb|AEA10080.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901606|gb|AEA10081.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901608|gb|AEA10082.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901610|gb|AEA10083.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901612|gb|AEA10084.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901614|gb|AEA10085.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901616|gb|AEA10086.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901618|gb|AEA10087.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901620|gb|AEA10088.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901622|gb|AEA10089.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901624|gb|AEA10090.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901626|gb|AEA10091.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901628|gb|AEA10092.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901630|gb|AEA10093.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901632|gb|AEA10094.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901634|gb|AEA10095.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901636|gb|AEA10096.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901638|gb|AEA10097.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901640|gb|AEA10098.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901642|gb|AEA10099.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901644|gb|AEA10100.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901646|gb|AEA10101.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901648|gb|AEA10102.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901650|gb|AEA10103.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901652|gb|AEA10104.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901654|gb|AEA10105.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901656|gb|AEA10106.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901658|gb|AEA10107.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901660|gb|AEA10108.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901662|gb|AEA10109.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901664|gb|AEA10110.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
gi|326901666|gb|AEA10111.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901668|gb|AEA10112.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901670|gb|AEA10113.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901672|gb|AEA10114.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901674|gb|AEA10115.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901676|gb|AEA10116.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901678|gb|AEA10117.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901680|gb|AEA10118.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901682|gb|AEA10119.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901684|gb|AEA10120.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901686|gb|AEA10121.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901688|gb|AEA10122.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901690|gb|AEA10123.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901692|gb|AEA10124.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901694|gb|AEA10125.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901696|gb|AEA10126.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901698|gb|AEA10127.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901700|gb|AEA10128.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901702|gb|AEA10129.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901704|gb|AEA10130.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901706|gb|AEA10131.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901708|gb|AEA10132.1| 40S ribosomal protein S3 [Grosmannia clavigera]
gi|326901710|gb|AEA10133.1| 40S ribosomal protein S3 [Leptographium terebrantis]
gi|326901712|gb|AEA10134.1| 40S ribosomal protein S3 [Leptographium terebrantis]
gi|326901714|gb|AEA10135.1| 40S ribosomal protein S3 [Leptographium terebrantis]
gi|326901716|gb|AEA10136.1| 40S ribosomal protein S3 [Leptographium longiclavatum]
gi|326901718|gb|AEA10137.1| 40S ribosomal protein S3 [Leptographium longiclavatum]
gi|326901720|gb|AEA10138.1| 40S ribosomal protein S3 [Leptographium wingfieldii]
gi|326901722|gb|AEA10139.1| 40S ribosomal protein S3 [Leptographium wingfieldii]
gi|326901724|gb|AEA10140.1| 40S ribosomal protein S3 [Grosmannia aurea]
Length = 194
Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 8/141 (5%)
Query: 83 DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAM 142
++ + +K + + L +V ++A +S+ +L + RRA ++ M
Sbjct: 1 ELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIM 60
Query: 143 RFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKV 200
GA G +V+ SG+L A +++ + +G + Q + ID T G GIKV
Sbjct: 61 ESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGIKV 119
Query: 201 YVSLRDEVSDSDSTIPAAEHR 221
+ SD A +
Sbjct: 120 KIMRG-----SDPDGKAGPQK 135
>gi|198456485|ref|XP_002136327.1| GA25150 [Drosophila pseudoobscura pseudoobscura]
gi|198142674|gb|EDY71398.1| GA25150 [Drosophila pseudoobscura pseudoobscura]
Length = 204
Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 36/171 (21%), Positives = 70/171 (40%), Gaps = 13/171 (7%)
Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLI 116
T II+ + + ++G+KG I ++ + N I L +V + A
Sbjct: 2 TPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETGRIELYAEKVATRGLCAIAQ 61
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
A+S+ +L + RRA ++ + GA G +V+ SG+L G + +++ +++G + +
Sbjct: 62 AESLRYKLTGGLAVRRACYGVLRFIIESGAKGCEVVVSGKLRG-QRAKSMKFVDGLM-IH 119
Query: 177 TLRAHIDY---GTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
+ DY T G GIKV + D + +
Sbjct: 120 SGDPCNDYVETATRHVLLRQGVLGIKVKIM-----LPYDPKNKIGPKKPLP 165
>gi|302748860|gb|ADL63910.1| ribosomal protein S3 [Malpighia glabra]
Length = 466
Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 5/160 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + + +I+K+R LSN TN+
Sbjct: 308 KVMELIEKFINLGRIGEL-IKAIEMMIEIILRNRKIPYGYNSYLNEIQKMRSLLSNRTNT 366
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAM---KRAVQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL +R FR + + M+ G +G+++
Sbjct: 367 NTLIESVKIQSVYQSASPIAQDISFQLRNKRRSFRSIFSKRVKYIPLVMKKGVEGIRISC 426
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAY 193
SGR GAE++RTEC G+ IDY A T +
Sbjct: 427 SGRSRGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRF 466
>gi|133907917|gb|ABO42418.1| ribosomal protein S3 [Rafflesia pricei]
Length = 477
Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 9/162 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ + + I + + G +++K R LSN
Sbjct: 320 KVMELIEKLINLGGIGE---WIKGIDMMIEILLRNSRIPYGYNSYLNEMQKRRSLLSNRQ 376
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERR---VVFRRAMKRAVQSAMRFGADGVKVI 152
++ + ++ +A+ IAQ I+ QL + +F + +K + M+ G +G+++
Sbjct: 377 KTQTLIESVKIQSVYQSASPIAQDISFQLRNKKSPYIFSQIVKD-LPLVMKKGVEGIRIC 435
Query: 153 ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE +RTEC G+ IDY A T YG
Sbjct: 436 CSGRLEGAERARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 477
>gi|224168293|ref|XP_002339135.1| predicted protein [Populus trichocarpa]
gi|222874470|gb|EEF11601.1| predicted protein [Populus trichocarpa]
Length = 95
Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 30/89 (33%), Positives = 44/89 (49%), Gaps = 4/89 (4%)
Query: 120 IAQQLE-RRVVFRRAMKRAVQ---SAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPL 175
I+ QL +R F + V+ M +G+++ SGRL GAE++ TEC G+
Sbjct: 1 ISFQLSNKRRSFSSIFSKIVKDLSLLMNKWVEGIRICCSGRLKGAEIAGTECGKYGKTSC 60
Query: 176 QTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
IDY A T YG G+KV++S
Sbjct: 61 NLFNQKIDYAPAEVSTPYGISGVKVWISY 89
>gi|237861296|gb|ACR24221.1| 40S ribosomal protein S3 [Nosema bombycis]
gi|326562626|gb|ADZ95643.1| 40S ribosomal protein S3 [Nosema bombycis]
Length = 214
Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 39/187 (20%), Positives = 83/187 (44%), Gaps = 13/187 (6%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y I+E+ + L G + + I +I++ +P + G+K
Sbjct: 12 ANGILYAE-------IKEFCEKALIPEGFSSVDIRFDENPIKIVLKVVKPHELTGEKKFK 64
Query: 84 IEKIRKKLS---NMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
+++++ + N+ I++ +++V + + A I +++ V ++RA +++
Sbjct: 65 LKQLQHLFASRLNVPEMNINIIIDKVVEKGLCPVFQANLIKEKMLAGVQYKRAANLVLRN 124
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
GA G + SG+L G + T+ +LEG V Q + ++ T T G G+
Sbjct: 125 TKFAGATGCLITISGKLKGL-RACTKKFLEGVVIKSGQPSKDYVKKYTTTVNTKQGVIGV 183
Query: 199 KVYVSLR 205
+V + L
Sbjct: 184 QVSIMLP 190
>gi|326901602|gb|AEA10079.1| 40S ribosomal protein S3 [Grosmannia sp. SMA-2010]
Length = 194
Score = 82.7 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 58/141 (41%), Gaps = 8/141 (5%)
Query: 83 DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAM 142
++ + +K + + L +V ++A +S+ +L + RRA ++ M
Sbjct: 1 ELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRFIM 60
Query: 143 RFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKV 200
GA G +V+ SG+L A +++ + +G + Q + ID T G GIKV
Sbjct: 61 ESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPAKDFIDSATRHVLLRQGVLGIKV 119
Query: 201 YVSLRDEVSDSDSTIPAAEHR 221
+ SD A +
Sbjct: 120 KIMRG-----SDPDGKAGPQK 135
>gi|133907915|gb|ABO42417.1| ribosomal protein S3 [Quiina pteridophylla]
Length = 454
Score = 82.7 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 9/163 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ I + + + G +++K+R LSN T
Sbjct: 295 KVMELIEKFINLGGIGEL---IKGIEMMIEIILRKRRIPYGYNSYLKEMKKMRSLLSNRT 351
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM----KRAVQSAMRFGADGVKV 151
+ + ++ +A+ IAQ I+ QL + R++ + + M+ G +G+++
Sbjct: 352 KTNTLIESVKIKSVYQSASPIAQDISFQLRNKKRSLRSILSKIVKDIPLVMKKGVEGIRI 411
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGR GAE++RTEC G++ IDY A T YG
Sbjct: 412 CCSGRSEGAEIARTECGKYGKISRNVFNQKIDYAPAEVSTRYG 454
>gi|270708970|ref|ZP_06223149.1| ribosomal protein S3 domain protein [Haemophilus influenzae
HK1212]
gi|270315695|gb|EFA27857.1| ribosomal protein S3 domain protein [Haemophilus influenzae
HK1212]
Length = 46
Score = 82.7 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCH 46
MGQK++P RLG+ W+S WFA ++ L D K+R++L
Sbjct: 1 MGQKVHPHGIRLGIVKPWSSTWFANTQDFADNLEGDFKVRKFLNKE 46
>gi|294877217|ref|XP_002767926.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239869954|gb|EER00644.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 200
Score = 82.7 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 43/187 (22%), Positives = 79/187 (42%), Gaps = 15/187 (8%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E L L + G + + + T II+ + R ++G+KG
Sbjct: 18 ADGVFYAEL-------NELLTTILAEDGYSGVEVRVTPIKTEIIIRATRTREVLGEKGRR 70
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ ++ + + + L V + A A+S+ +L + RRA ++
Sbjct: 71 IRELTALVERRFDFPENSVELFAERVDNRALCAQAQAESLRYKLLGGLPVRRAAYGVLRF 130
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH---IDYGTAVAETAYGSCG 197
M GA GV+V SG+L A+ ++ + +G + L T +D + G G
Sbjct: 131 VMENGAKGVEVTVSGKLR-AQRAKVMKFADGYL-LSTGTPKEMYVDQAIRNVDMRQGILG 188
Query: 198 IKVYVSL 204
I+V + +
Sbjct: 189 IRVKIMM 195
>gi|133907857|gb|ABO42388.1| ribosomal protein S3 [Guthriea capensis]
Length = 456
Score = 82.7 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 77/161 (47%), Gaps = 8/161 (4%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 300 KVMELIEKFINLGRIGEL-IKGIEMMIEIILRNRRIPYAYLN---EMKKMRSLLSNRTNT 355
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + + + M+ G +G+++
Sbjct: 356 NTFIESVKIQSVYQSASPIAQDISFQLRNKTRSFRSILSQIMKDIPLVMKKGVEGIRICC 415
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 416 SGRLEGAEIARTECGKYGKTSRNVFHQKIDYAPAEVSTRYG 456
>gi|312232713|gb|ADQ53685.1| ribosomal protein S3 [Croton glandulosepalus]
Length = 430
Score = 82.4 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 6/162 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSAR-PGLIIGKKGTDIEKIRKKLSNMTN 96
K+ E ++ + + ++ I+ II+ + R P ++ K+R LSN TN
Sbjct: 270 KVMELIEKFISLGRIGEL-IKGIEMMIEIILRNRRIPYGWYNSYLNEMTKMRSLLSNRTN 328
Query: 97 SEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVI 152
+ +L ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 329 TNTYLESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRIC 388
Query: 153 ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 389 CSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 430
>gi|312232689|gb|ADQ53673.1| ribosomal protein S3 [Croton curiosus]
Length = 489
Score = 82.4 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 16/170 (9%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT---------DIEKIR 88
K+ E ++ + G+ ++ I + + G +++K+R
Sbjct: 323 KVMELIEKFINLGGIGEL---IKGIEMMIEIILRNRRIPYGYHFYLNGYRSYLNEMKKMR 379
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRF 144
LSN TN+ + ++ +A+ IAQ I+ QL + FR + + + M+
Sbjct: 380 SLLSNRTNTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIYSKIVKDIPLVMKK 439
Query: 145 GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
G +G+++ SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 440 GVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 489
>gi|159041478|ref|YP_001540730.1| 30S ribosomal protein S3P [Caldivirga maquilingensis IC-167]
gi|157920313|gb|ABW01740.1| ribosomal protein S3- domain protein [Caldivirga maquilingensis
IC-167]
Length = 236
Score = 82.4 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 52/192 (27%), Positives = 83/192 (43%), Gaps = 4/192 (2%)
Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN 96
I+EYL L + +I+RT RI++ + + IIG+KG ++ + L + N
Sbjct: 23 WMIKEYLNIALTRNRYVDSIIQRTTLGTRIVIIAEKKNRIIGRKGQQVKALADILKSKFN 82
Query: 97 -SEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155
+ + V + P PE NA L+A IA + + + FRRA A++ G +VI SG
Sbjct: 83 LDNVVIDVIQEPHPEYNARLVALRIADAMAKGIRFRRAAIIALRQLQEANVQGAEVIISG 142
Query: 156 RLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
+L E SR E Y G V Q + G ++V V D
Sbjct: 143 KLT-TERSRFEKYTTGIVIKAGQDALEKVQEAVIPVLLKPGIFSVRVRVLPPDAKLSDRF 201
Query: 214 TIPAAEHRVVEK 225
+ + E V++
Sbjct: 202 EVKSPEEVQVKQ 213
>gi|312232663|gb|ADQ53660.1| ribosomal protein S3 [Croton argyrophyllus]
Length = 413
Score = 82.4 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 12/169 (7%)
Query: 38 KIREYLQCHLKQAGVAKI------LIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRK 89
K+ E ++ + + ++ +I+ + +I + R +++K+R
Sbjct: 245 KVMELIEKFINLGRIGELIKGIERMIKIILRKSKIGIKKKRIPYPYRYNFYFFEMKKMRS 304
Query: 90 KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFG 145
LSN TN+ +L ++ +A+ IAQ I+ QL + FR + V+ M+ G
Sbjct: 305 LLSNRTNTNTYLESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKDIPLVMKKG 364
Query: 146 ADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
+G+++ SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 365 VEGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 413
>gi|288191221|gb|ADC43963.1| ribosomal protein S3 [Lachnostylis bilocularis]
Length = 269
Score = 82.4 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 40/120 (33%), Positives = 61/120 (50%), Gaps = 4/120 (3%)
Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQS 140
+++K+R LSN T + + ++ +A+ IAQ I+ QL + FR + V+
Sbjct: 150 NEMKKMRSLLSNRTKTNTLIESVKIQSLYQSASPIAQDISFQLRNKTISFRSIFNQIVKD 209
Query: 141 A---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197
M+ G +GV++ SGRL GAE++RTEC G+ IDY A T YG G
Sbjct: 210 IPLEMKKGVEGVRICCSGRLEGAEIARTECRKYGKTSRNVFNQKIDYAPAEVSTPYGISG 269
>gi|302748543|gb|ADL63752.1| ribosomal protein S3 [Anisoptera marginata]
Length = 453
Score = 82.4 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 5/159 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ T II+ + R +++K++ LSN TN+
Sbjct: 296 KVIELIKKLINLGGIEEL-IKGTEMIMEIILRNRRIPYGYNSYLNEVKKMQSLLSNRTNT 354
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + +Q M+ G +G+++
Sbjct: 355 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIQLVMKKGVEGIRICC 414
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETA 192
SGRL GAE++RTEC G+ IDY A T
Sbjct: 415 SGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTR 453
>gi|302748802|gb|ADL63881.1| ribosomal protein S3 [Hydrophyllum virginianum]
Length = 455
Score = 82.4 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 74/161 (45%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + + I+ II+ + R +++K+R LSN T++
Sbjct: 296 KVMELIEKFIDLGRIGEF-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTST 354
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ + +A+ IAQ I+ Q + FR + V+ M+ G +G+++
Sbjct: 355 NTLIESVRIQSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVKDIPLVMKKGVEGIRICC 414
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGR GAE++RTEC G+ IDY +A T YG
Sbjct: 415 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYASAEVSTRYG 455
>gi|255554452|ref|XP_002518265.1| 50S ribosomal protein L14, putative [Ricinus communis]
gi|223542612|gb|EEF44151.1| 50S ribosomal protein L14, putative [Ricinus communis]
Length = 236
Score = 82.4 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 40/63 (63%)
Query: 134 MKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAY 193
MK+A++ + G++V GRL+G E++R E EGRVPLQT+RA IDY + T Y
Sbjct: 1 MKKAIELTEQADTKGIQVQIVGRLDGKEIARFEWIREGRVPLQTIRAKIDYCSYTVRTIY 60
Query: 194 GSC 196
G+
Sbjct: 61 GAL 63
>gi|312232651|gb|ADQ53654.1| ribosomal protein S3 [Croton alamosanus]
gi|312232745|gb|ADQ53701.1| ribosomal protein S3 [Croton lindheimerianus]
gi|312232747|gb|ADQ53702.1| ribosomal protein S3 [Croton lindheimeri]
Length = 413
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 12/169 (7%)
Query: 38 KIREYLQCHLKQAGVAKI------LIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRK 89
K+ E ++ + + ++ +I+ + +I + R +++K+R
Sbjct: 245 KVMELIEKFINLGRIGELIKGIERMIKIILRKSKIGIKKKRIPYPYRYNFYFIEMKKMRS 304
Query: 90 KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFG 145
LSN TN+ +L ++ +A+ IAQ I+ QL + FR + V+ M+ G
Sbjct: 305 LLSNRTNTNTYLESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKDIPLVMKKG 364
Query: 146 ADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
+G+++ SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 365 VEGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 413
>gi|133907873|gb|ABO42396.1| ribosomal protein S3 [Koilodepas bantamense]
Length = 492
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 44/160 (27%), Positives = 75/160 (46%), Gaps = 5/160 (3%)
Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE 98
+ E ++ L + ++ I+ + II+ R +++K+R LSN TN+
Sbjct: 334 VMELIEKFLNLGRIGEL-IKGIYMMKEIILRKRRIPYGYNSYLNEMKKMRSLLSNRTNTN 392
Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIAS 154
+ ++ +A+ IAQ I+ QL + FR + + M+ G +G+++ S
Sbjct: 393 TLIESIKMKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIEKDIPLVMKKGVEGIRISCS 452
Query: 155 GRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
GRL GAE++RTEC G+ IDY A T YG
Sbjct: 453 GRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 492
>gi|222446780|gb|ACM51435.1| ribosomal protein S3 [Caulerpa filiformis]
Length = 49
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ 49
MGQK++PI FRLG T +S+WFA + Y L ED IR+ L + K+
Sbjct: 1 MGQKVHPIGFRLGQTQTHSSQWFAAKNNYSQFLLEDHFIRQMLLKYSKK 49
>gi|133907901|gb|ABO42410.1| ribosomal protein S3 [Passiflora coccinea]
Length = 466
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 6/160 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSE 98
+ ++ K + +I I + + G ++ K+R LSN TN+
Sbjct: 307 KVIELIEKFRNLGRIGELIKGIEMMIEIILRNRIIPYGYNSYLNEMTKMRSLLSNRTNTN 366
Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIAS 154
+ ++ +A+LIAQ I+ QL + FR + V+ M+ G G+++ S
Sbjct: 367 TLIESVKIQSVYQSASLIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVGGIRICCS 426
Query: 155 GRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
GRL GAE++RTEC G+ L IDY A T YG
Sbjct: 427 GRLEGAEIARTECGKYGKTSRNVLYQKIDYAPAEVSTRYG 466
>gi|133907841|gb|ABO42380.1| ribosomal protein S3 [Erythrococca sp. Cheek s.n.]
Length = 503
Score = 82.0 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 9/163 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E + + G+ + I + + G +++K+R LSN T
Sbjct: 344 KVMELIDKFINLGGIGEF---LKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRT 400
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
++ + ++ +A IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 401 KTQTLIESIKMKSVYQSAFPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRI 460
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 461 CCSGRLEGAEIARTECGKYGKTFRNVFNQKIDYAPAEVSTPYG 503
>gi|288191271|gb|ADC43988.1| ribosomal protein S3 [Averrhoa carambola]
Length = 466
Score = 82.0 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 70/161 (43%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ G L I + + R +++K+R LSN T+
Sbjct: 307 KVMELIEK-FINLGGIGELXXGIXXMIEIXLXNXRIPYXXNXYLNEVKKMRSLLSNRTSP 365
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 366 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 425
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGR GAE++RTEC G+ IDY A T YG
Sbjct: 426 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 466
>gi|288191217|gb|ADC43961.1| ribosomal protein S3 [Croizatia brevipetiolata]
Length = 269
Score = 82.0 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 4/120 (3%)
Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS 140
+++K+R LSN T + + ++ +A+ IAQ I+ +L + FR + + V+
Sbjct: 150 NEMKKMRSLLSNRTKTNTLIESVKIQSLYQSASPIAQDISLKLRNKTRSFRSILNQIVKD 209
Query: 141 AMRFGAD---GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197
GV++ SGRL GAE++RTEC G+ L IDY A T YG G
Sbjct: 210 IPLVMKKRVEGVRICCSGRLKGAEIARTECGKYGKTSLHVFNQKIDYAPAEVSTPYGISG 269
>gi|288191124|gb|ADC43915.1| ribosomal protein S3 [Licania michauxii]
Length = 386
Score = 81.6 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 46/166 (27%), Positives = 69/166 (41%), Gaps = 10/166 (6%)
Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLS---- 92
IR+ L+ AG K I + + K KK+
Sbjct: 223 HFIRQ--ANDLRFAGTTKTTISLFPFFGATFFFLRDGVEVYNNNNFSYLKEMKKMRSLLS 280
Query: 93 NMTNSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADG 148
N TN+ + ++ +A+ IAQ I+ QL +R FR + V+ M+ G +G
Sbjct: 281 NRTNTNTLIESVKIQSVYQSASPIAQDISFQLRNKRRSFRSIFSKIVKDIPLVMKKGVEG 340
Query: 149 VKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
+++ SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 341 IRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 386
>gi|133907819|gb|ABO42369.1| ribosomal protein S3 [Chrysobalanus icaco]
Length = 389
Score = 81.6 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 46/166 (27%), Positives = 69/166 (41%), Gaps = 10/166 (6%)
Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLS---- 92
IR+ L+ AG K I + + K KK+
Sbjct: 226 HFIRQ--ANDLRFAGTTKTTISLFPFFGATFFFLRDGVEVYNNNNFSYLKEMKKMRSLLS 283
Query: 93 NMTNSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADG 148
N TN+ + ++ +A+ IAQ I+ QL +R FR + V+ M+ G +G
Sbjct: 284 NRTNTNTLIESVKIQSVYQSASPIAQDISFQLRNKRRSFRSIFSKIVKDIPLVMKKGVEG 343
Query: 149 VKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
+++ SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 344 IRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 389
>gi|154334600|ref|XP_001563547.1| 40S ribosomal protein S3 [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134060568|emb|CAM42116.1| putative 40S ribosomal protein S3 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 219
Score = 81.6 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 76/185 (41%), Gaps = 6/185 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E+L+ L + G + + T I++ + + ++G G I ++ ++ N
Sbjct: 22 EFLKRELAEEGFSGVSYHITTLRTEIVIKATKTREVLGVNGRRIRELTACIQQRFNYKEG 81
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
++ L V V ++A +S+ +L + RRA ++ M GA G +V G++
Sbjct: 82 KLQLYVERVEVRGLSAMAQVESLRFKLLSNLQVRRAAMGIIRYVMESGAKGCEVTVGGKI 141
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
G + +++ + +G + ++ +D G G+KV + L + + +
Sbjct: 142 KG-QRAKSMTFRDGYMIKSGTAHKSFVDSACRHCYMRAGCIGVKVKIMLPGDSTGRNGPS 200
Query: 216 PAAEH 220
Sbjct: 201 EPLPD 205
>gi|133907789|gb|ABO42354.1| ribosomal protein S3 [Atuna racemosa]
Length = 389
Score = 81.6 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 46/166 (27%), Positives = 69/166 (41%), Gaps = 10/166 (6%)
Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLS---- 92
IR+ L+ AG K I + + K KK+
Sbjct: 226 HFIRQ--ANDLRFAGTTKTTISLFPFFGATFFFLRDGVEVYNNNNFSYLKEMKKMRSLLS 283
Query: 93 NMTNSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADG 148
N TN+ + ++ +A+ IAQ I+ QL +R FR + V+ M+ G +G
Sbjct: 284 NRTNTNTLIESVKIQSVYQSASPIAQDISFQLRNKRRSFRSIFSKIVKDIPLVMKKGVEG 343
Query: 149 VKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
+++ SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 344 IRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 389
>gi|146082044|ref|XP_001464434.1| 40S ribosomal protein S3 [Leishmania infantum JPCM5]
gi|146097654|ref|XP_001468174.1| 40S ribosomal protein S3 [Leishmania infantum]
gi|157866908|ref|XP_001682009.1| 40S ribosomal protein S3 [Leishmania major strain Friedlin]
gi|157874873|ref|XP_001685848.1| 40S ribosomal protein S3 [Leishmania major strain Friedlin]
gi|68125460|emb|CAJ03321.1| putative 40S ribosomal protein S3 [Leishmania major strain
Friedlin]
gi|68128921|emb|CAJ06157.1| putative 40S ribosomal protein S3 [Leishmania major strain
Friedlin]
gi|134068526|emb|CAM66821.1| putative 40S ribosomal protein S3 [Leishmania infantum JPCM5]
gi|134072541|emb|CAM71255.1| putative 40S ribosomal protein S3 [Leishmania infantum JPCM5]
gi|322489852|emb|CBZ25113.1| putative 40S ribosomal protein S3 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494589|emb|CBZ29891.1| putative 40S ribosomal protein S3 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 219
Score = 81.6 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 76/185 (41%), Gaps = 6/185 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E+L+ L + G + + T I++ + + ++G G I ++ ++ N
Sbjct: 22 EFLKRELAEEGFSGVSYHVTTLRTEIVIKATKTREVLGVNGRRIRELTACIQQRFNYKEG 81
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
++ L V V ++A +S+ +L + RRA ++ M GA G +V G++
Sbjct: 82 KLQLYVERVEVRGLSAMAQVESLRFKLLSNLQVRRAAMGIIRYVMESGAKGCEVTVGGKI 141
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
G + +++ + +G + ++ +D G G+KV + L + + +
Sbjct: 142 KG-QRAKSMTFRDGYMIKSGTAHKSFVDSACRHCYMRAGCIGVKVKIMLPGDSTGRNGPS 200
Query: 216 PAAEH 220
Sbjct: 201 EPLPD 205
>gi|267847204|gb|ACY80734.1| ribosomal protein S3 [Codium parvulum]
Length = 52
Score = 81.6 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 28/51 (54%), Positives = 37/51 (72%)
Query: 155 GRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
GR NGAE++RTE EG+VPLQTL A+IDY A+T YG GIK+++ +
Sbjct: 1 GRFNGAEIARTEWVREGQVPLQTLAANIDYTFRTAKTIYGILGIKIWIFQK 51
>gi|133907897|gb|ABO42408.1| ribosomal protein S3 [Parnassia grandifolia]
Length = 480
Score = 81.6 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 77/161 (47%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + + +++K+R LSN TN+
Sbjct: 321 KVMELIEKFINLGGIGEL-IKGIEMMIEIILINRKIPYGYNFYLNEVQKMRSLLSNRTNT 379
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 380 NTFIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKDIPLVMKKGVEGIRICC 439
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGR GAE++RTEC G+ IDY A T YG
Sbjct: 440 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 480
>gi|133907859|gb|ABO42389.1| ribosomal protein S3 [Hirtella bicornis]
Length = 389
Score = 81.6 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 46/166 (27%), Positives = 69/166 (41%), Gaps = 10/166 (6%)
Query: 37 LKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLS---- 92
IR+ L+ AG K I + + K KK+
Sbjct: 226 HFIRQ--ANDLRFAGTTKTTISLFPFFGATFFFLRDGVEVYNNNNFSYLKEMKKMRSLLS 283
Query: 93 NMTNSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADG 148
N TN+ + ++ +A+ IAQ I+ QL +R FR + V+ M+ G +G
Sbjct: 284 NRTNTNTLIESVKIQSVYQSASPIAQDISFQLRNKRRSFRSIFSKIVKDIPLVMKKGVEG 343
Query: 149 VKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
+++ SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 344 IRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 389
>gi|133907855|gb|ABO42387.1| ribosomal protein S3 [Garcinia hessii]
Length = 366
Score = 81.6 bits (200), Expect = 9e-14, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ G+ LI+ II+ + R +++K+R +SN T +
Sbjct: 207 KVMELIEK-FINLGLIGELIKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLVSNRTKT 265
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL +R FR + V+ M+ G +G+++
Sbjct: 266 NTLIESVKMKSVYQSASPIAQDISFQLRNKRRSFRSIFTKIVKDILFVMKNGLEGIRICC 325
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGR GA+++RTEC G+ IDY A T YG
Sbjct: 326 SGRSKGAKIARTECGNYGKTSRNVFNQKIDYAPAEVSTRYG 366
>gi|312232701|gb|ADQ53679.1| ribosomal protein S3 [Croton eremophilus]
Length = 211
Score = 81.2 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS 140
++ +R LSN TN+ +L ++ +A+ IAQ I+ QL + FR + V+
Sbjct: 95 FKMKFMRSLLSNRTNTNTYLEPVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKD 154
Query: 141 A---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
M+ G +G+++ SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 155 IPLVMKKGVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 211
>gi|297672638|ref|XP_002814396.1| PREDICTED: 40S ribosomal protein S3-like [Pongo abelii]
Length = 268
Score = 81.2 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 37/187 (19%), Positives = 73/187 (39%), Gaps = 25/187 (13%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIH 100
E+L L + G + + + T II+ + R I+G+KG I ++ +
Sbjct: 66 EFLTQELAEDGYSGVEVRVTPTRTEIIILATRTQSILGEKGRRIRELTAIVQKRFGFREG 125
Query: 101 LSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGA 160
+ +++L + RRA ++ M GA G KV+ SG+L G
Sbjct: 126 ---------------SVELYSEKLLGGLAVRRACYGVLRFIMESGAKGCKVVVSGKLRG- 169
Query: 161 ELSRTECYLEGRVPLQTLRA---HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
+ +++ +++G + + + A ++D G GIKV + D T
Sbjct: 170 QRAKSMKFVDGLM-IHSGDAVNYYVDTAVCHVLLRQGVLGIKVKIM-----LPWDPTGKT 223
Query: 218 AEHRVVE 224
+ +
Sbjct: 224 GPKKPLP 230
>gi|133907785|gb|ABO42352.1| ribosomal protein S3 [Acharia tragodes]
Length = 476
Score = 81.2 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E + + + ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 317 KVMELIDKFINLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 375
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ +L + FR + + + M+ G +G+++
Sbjct: 376 NTLIESVKIQSVYQSASPIAQDISLKLRNKTRSFRSILSQIMKDIPLVMKKGVEGIRICC 435
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 436 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTPYG 476
>gi|312232653|gb|ADQ53655.1| ribosomal protein S3 [Croton andinus]
gi|312232793|gb|ADQ53725.1| ribosomal protein S3 [Croton pedicellatus]
gi|312232831|gb|ADQ53744.1| ribosomal protein S3 [Croton tenuilobus]
Length = 429
Score = 81.2 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 76/161 (47%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN T +
Sbjct: 270 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTKT 328
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ +L + FR + V+ M+ G +G+++
Sbjct: 329 NTLIESVKIKSVYQSASPIAQDISLKLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 388
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL G E++RTEC G+ IDY A T YG
Sbjct: 389 SGRLEGEEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 429
>gi|288191249|gb|ADC43977.1| ribosomal protein S3 [Scyphostegia borneensis]
Length = 272
Score = 81.2 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ L G+ ++ I+ II+ + R +++K+R L N TN+
Sbjct: 117 KVMELIEKFLNLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMQKMRSLLYNRTNT 175
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRA---VQSAMRFGADGVKVIA 153
+ ++P +A+LIAQ I+ QL + FR + + M+ G +G+++
Sbjct: 176 NTLIESVKIPSFYQSASLIAQDISFQLRNKTRAFRSIFSQIVKDISLVMKKGVEGIRISC 235
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189
SGRL GAE++RTEC G++ IDY A
Sbjct: 236 SGRLEGAEIARTECGKYGKLSCNVFNQKIDYAPAEV 271
>gi|130076582|gb|ABO31949.1| ribosomal protein S3 [Myriophyllum sp. Qiu 95020]
Length = 467
Score = 81.2 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 48/187 (25%), Positives = 82/187 (43%), Gaps = 22/187 (11%)
Query: 29 YGALLHEDL------KIREYLQCHLKQAGVAKILIE----------RTHKNCRIIVYSAR 72
Y L ED K+R+ + +++ V +++ + + I +
Sbjct: 281 YKKLFFEDAREQLLGKLRKRFRNLMRKNKVMELIDKFIDLGGIGELKKGIEMMIEIILRN 340
Query: 73 PGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV- 129
+ G ++K+R LSN TN+ + ++ +A+LIAQ I+ Q +
Sbjct: 341 RRIPYGYNSYLNKVKKMRSSLSNRTNTNTLIESVKIASVYQSASLIAQDISFQPRNKTRS 400
Query: 130 FRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGT 186
FR + V+ M+ G +G+++ SGRL GAE++RTEC G+ P IDY
Sbjct: 401 FRSIFSQIVKDIPLVMKKGVEGIRICCSGRLKGAEIARTECGKYGKTPRNVFNQKIDYAP 460
Query: 187 AVAETAY 193
A T Y
Sbjct: 461 AEVSTRY 467
>gi|323307522|gb|EGA60793.1| Rps3p [Saccharomyces cerevisiae FostersO]
Length = 184
Score = 81.2 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/159 (22%), Positives = 63/159 (39%), Gaps = 11/159 (6%)
Query: 75 LIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM 134
+ G++ ++ + +K I L V ++A A+S+ +L + RRA
Sbjct: 4 VKNGRRINELTLLVQKRFKYAPGTIVLYAERVQDRGLSAVAQAESMKFKLLNGLAIRRAA 63
Query: 135 KRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETA 192
V+ M GA G +V+ SG+L A ++ + +G + Q + ID T
Sbjct: 64 YGVVRYVMESGAKGCEVVVSGKLRAA-RAKAMKFADGFLIHSGQPVNDFIDTATRHVLMR 122
Query: 193 YGSCGIKVYVSL--------RDEVSDSDSTIPAAEHRVV 223
G GIKV + + D+ + I E +
Sbjct: 123 QGVLGIKVKIMRDPAKSRTGPKALPDAVTIIEPKEEEPI 161
>gi|312232849|gb|ADQ53753.1| ribosomal protein S3 [Croton yucatanensis]
Length = 413
Score = 81.2 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 12/169 (7%)
Query: 38 KIREYLQCHLKQAGVAKI------LIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRK 89
K+ E ++ + + ++ +I+ + +I + R +++K+R
Sbjct: 245 KVMELIEKFINLGRIGELIKGIERMIKIILRKSKIGIKKKRIPYPYRYNFYFFEMKKMRS 304
Query: 90 KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSAMRFGAD- 147
LSN TN+ +L ++ +A+ IAQ I+ QL + FR + V+
Sbjct: 305 LLSNRTNTNTYLESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKDIPLVMKKR 364
Query: 148 --GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
G+++ SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 365 VEGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 413
>gi|312232723|gb|ADQ53690.1| ribosomal protein S3 [Croton heterocalyx]
Length = 484
Score = 81.2 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 72/161 (44%), Gaps = 9/161 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
+I E ++ + +I + +++K+R LSN TN+
Sbjct: 329 RIGELIKGIEMMIKIILRNRRIRIVKRKIRI-----PYRYNFYFFEMKKMRSLLSNRTNT 383
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+L ++ +A+ IAQ I+ QL+ + FR + V+ M+ G +G+++
Sbjct: 384 NTYLESVKIKSVYQSASPIAQDISFQLKNKTRSFRSIFSQIVKDIPLVMKKGVEGIRICC 443
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 444 SGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 484
>gi|133907939|gb|ABO42429.1| ribosomal protein S3 [Trigonia nivea]
Length = 474
Score = 81.2 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 78/171 (45%), Gaps = 7/171 (4%)
Query: 31 ALLHEDLKIREYLQCHLKQAGVA---KILIERTHKNCRIIVYSARPGLIIGKKGTDIEKI 87
L+ +D I E + + + K + II+ + R +++K+
Sbjct: 304 NLMGKDKVIMELIDIFISLGRIGELIKGIEIMIEMMIEIILRNRRIPYGYNSYLNEMKKM 363
Query: 88 RKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MR 143
R LSN TN+ + ++ +A+LIAQ I+ QL + FR + V+ M+
Sbjct: 364 RSFLSNRTNTNTLIESVKIKSVYQSASLIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMK 423
Query: 144 FGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
G +G+++ SGRL G+E++RTEC G+ IDY A T YG
Sbjct: 424 KGVEGIRICCSGRLEGSEIARTECGKYGKTSRNVFNQKIDYALAEVSTRYG 474
>gi|224999236|gb|ACN78390.1| ribosomal protein S3 [Codium fragile]
Length = 53
Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 155 GRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
GR NGA+++RTE +G+VPLQ+L A+IDY A+T YG GIK+++
Sbjct: 2 GRFNGADIARTEWIRKGQVPLQSLAANIDYCCRTAKTIYGILGIKIWIFQP 52
>gi|312232799|gb|ADQ53728.1| ribosomal protein S3 [Croton polyandrus]
Length = 486
Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 4/117 (3%)
Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS 140
+++K+R LSN TN+ +L ++ +A+ IAQ I+ QL + FR + V+
Sbjct: 370 YEMKKMRSLLSNRTNTNTYLESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKD 429
Query: 141 A---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
M+ G +G+++ SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 430 IPLVMKKGVEGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 486
>gi|302749041|gb|ADL64000.1| ribosomal protein S3 [Sphenoclea zeylanica]
Length = 476
Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/161 (25%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ ++ + + ++ I+ II+ + + +++K+R LSN TN+
Sbjct: 317 KVMXLIEKFIDLGRIGEL-IKGIEMMIEIILRNRKIPYGYNSYLNEVKKMRSFLSNRTNT 375
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLER-RVVFRRAMKRAVQSA---MRFGADGVKVIA 153
++ ++ +A+ IAQ I+ Q R FR + + V++ M+ G +G+++
Sbjct: 376 NTNIESVKIKSVYQSASPIAQDISFQPRNQRGSFRSILSQIVKNIPFEMKKGVEGIRICC 435
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGR +GAE++RTEC G+ +DY A T YG
Sbjct: 436 SGRSSGAEIARTECGKYGKTSRNVFNQKMDYAPAEVSTRYG 476
>gi|254726305|ref|ZP_05188087.1| 30S ribosomal protein S3 [Bacillus anthracis str. A1055]
Length = 56
Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 27/55 (49%)
Query: 166 ECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
E Y EG VPL TLRA IDY A+T YG G+KV++ + +
Sbjct: 2 ESYSEGTVPLHTLRADIDYAAVEADTTYGKLGVKVWIYRGEVLPTKKKASEEGGK 56
>gi|312232811|gb|ADQ53734.1| ribosomal protein S3 [Croton salutaris]
Length = 484
Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/161 (26%), Positives = 72/161 (44%), Gaps = 9/161 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
+I E ++ + +I + +++K+R LSN TN+
Sbjct: 329 RIGELIKGIEMMIKIILRNRRIRIVKRKIRI-----PYRYNFYFFEMKKMRSLLSNRTNT 383
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+L ++ +A+ IAQ I+ QL+ + FR + V+ M+ G +G+++
Sbjct: 384 NTYLESVKIKSVYQSASPIAQDISFQLKNKTRSFRSIFSQIVKDIPLVMKKGVEGIRICC 443
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 444 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 484
>gi|130076596|gb|ABO31956.1| ribosomal protein S3 [Sedum humifusum]
Length = 479
Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 71/163 (43%), Gaps = 9/163 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + + + I + + G +++K+R LSN T
Sbjct: 320 KVMELIEKFIDLGEIGEF---LKGIEMMIEIILRNKRIPYGYNSYLNEVKKMRSLLSNRT 376
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++
Sbjct: 377 NTNTLIQSVKIQSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRI 436
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGR GAE++RTEC G+ IDY A T YG
Sbjct: 437 CCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 479
>gi|312232667|gb|ADQ53662.1| ribosomal protein S3 [Croton billbergianus]
Length = 415
Score = 80.4 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/169 (26%), Positives = 80/169 (47%), Gaps = 12/169 (7%)
Query: 38 KIREYLQCHLKQAGVAK------ILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRK 89
K+ E ++ + + + ++I+ +N RI++ + +++K+R
Sbjct: 247 KVMELIEKFINLGRIGELIKGIEMMIKIILRNRRILIVKRNRRIPYRYNSYLNEMKKMRS 306
Query: 90 KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFG 145
LSN TN+ + ++ +A+ IAQ I+ QL + FR + + + M+ G
Sbjct: 307 LLSNRTNTNTLIESVKMKSVYQSASPIAQDISFQLRNKTRSFRSIYSKIVKDIPLVMKKG 366
Query: 146 ADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
+G+++ SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 367 VEGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 415
>gi|312232825|gb|ADQ53741.1| ribosomal protein S3 [Croton skutchii]
Length = 415
Score = 80.4 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 12/169 (7%)
Query: 38 KIREYLQCHLKQAGVAK------ILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRK 89
K+ E ++ + V + ++I+ +N RI++ + ++ K+R
Sbjct: 247 KVMELIEKFINLGRVGELIKGIEMMIKIILRNRRILIVKRNRRIPYRYNSYFFEMTKMRS 306
Query: 90 KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFG 145
LSN TN+ +L ++ +A+ IAQ I+ +L + FR + V+ M+ G
Sbjct: 307 LLSNRTNTNTYLESVKIKSVYQSASPIAQDISLKLRNKTRSFRSIFSQIVKDIPLVMKKG 366
Query: 146 ADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
+G+++ SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 367 VEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 415
>gi|223927941|gb|ACN23613.1| ribosomal protein S3 [Halimeda discoidea]
Length = 135
Score = 80.4 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK+ + FRLG+ S+W+A Y + ED +R L K+A KI I R
Sbjct: 1 MGQKVXXLGFRLGITQPXLSQWYASKRYYSKYVLEDXFVRTJLSEKYKRAKFEKIHISRK 60
Query: 61 H-KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN-------MTNSEIHLSVNEVPKPEIN 112
+ I++++ +P ++IGKK ++ +K++ + + + + +I+
Sbjct: 61 IEDHLEIVIHAQKPDILIGKKSETLKSFQKQIKKYXFQYRQIEWNSKLKVIIYXFRXKIH 120
Query: 113 ATLIAQSIAQQLERR 127
A+ IA I + E+R
Sbjct: 121 ASSIADFIVEHXEKR 135
>gi|312232751|gb|ADQ53704.1| ribosomal protein S3 [Croton luetzelburgii]
Length = 427
Score = 80.4 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 5/159 (3%)
Query: 40 REYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEI 99
E ++ G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 270 MELIEKFRNLGGIGEL-IKGIEMMIEIILRNKRIPYGYNSYLNEMKKMRSLLSNRTNTNT 328
Query: 100 HLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASG 155
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G DG+++ SG
Sbjct: 329 LIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKDIPLVMKKGVDGIRICCSG 388
Query: 156 RLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
RL GAE++RT+C G+ IDY A T YG
Sbjct: 389 RLEGAEIARTKCGKYGKTSRNVFNQKIDYAPAEVSTRYG 427
>gi|133907879|gb|ABO42399.1| ribosomal protein S3 [Lunania parviflora]
Length = 467
Score = 80.4 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E + + G+ ++ I II+ + R +++K+R LSN TN+
Sbjct: 308 KVMELIDNFINLGGIGEL-IRGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 366
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ +L + FR + V+ M G +G+++
Sbjct: 367 NTLIESVKIQSVYQSASPIAQDISLKLRNKTRSFRSIFSQIVKDIPLVMIKGVEGIRICC 426
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGR GAE++RTEC G+ IDY A T YG
Sbjct: 427 SGRSKGAEIARTECGKYGKTYHNVFFQKIDYAPAEVSTRYG 467
>gi|83283961|gb|ABC01888.1| 40S ribosomal protein-like protein [Solanum tuberosum]
Length = 240
Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/171 (22%), Positives = 71/171 (41%), Gaps = 8/171 (4%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E L L + G + + + T II+ + R ++G+KG I + + N +
Sbjct: 24 EVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRSLTSVVQKRFNFKEN 83
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGAD-GVKV-IASG 155
+ L +V + A A+S+ +L + RRA ++ M G G +V SG
Sbjct: 84 SVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGTPTGCEVDSVSG 143
Query: 156 RLNGAELSRTECYLEGRVPLQTL--RAHIDYGTAVAETAYGSCGIKVYVSL 204
+L A+ +++ +G + L ++D G GIKV + L
Sbjct: 144 KLR-AQRAKSMKSTDGYMISSGLPVSDYVDAAVRHVLLRQGVLGIKVKIML 193
>gi|312232665|gb|ADQ53661.1| ribosomal protein S3 [Croton atrostellatus]
Length = 414
Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 4/117 (3%)
Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS 140
+++K+R LSN TN+ +L ++ +A+ IAQ I+ QL + FR + V+
Sbjct: 298 FEMKKMRSLLSNRTNTNTYLESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKD 357
Query: 141 A---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
M+ G +G+++ SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 358 IPLVMKKGVEGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 414
>gi|327311857|ref|YP_004338754.1| 30S ribosomal protein S3P [Thermoproteus uzoniensis 768-20]
gi|326948336|gb|AEA13442.1| 30S ribosomal protein S3P [Thermoproteus uzoniensis 768-20]
Length = 194
Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 81/168 (48%), Gaps = 7/168 (4%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
I+E+L+ L + G I +T RI++Y+ RP IIGKKG ++++ + L +
Sbjct: 1 MIKEFLEYKLARLGYVDSEILKTPLGTRIVIYAERPSRIIGKKGAVVKELSQILGSKLGV 60
Query: 98 EI----HLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIA 153
E + +++V PE+ ++A IA + + + FRR A++ GA G +++
Sbjct: 61 ENPQIDVIDISKVDVPEMFPKVVAYRIANAMAKGIRFRRVAFIAIRQVTEAGARGFELVI 120
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRA--HIDYGTAVAETAYGSCGIK 199
SG+L+ E ++ E Y G+V + + G GIK
Sbjct: 121 SGKLS-TERAKFEKYKIGKVYKTGADSTKTMRSAVVHVLLKPGIYGIK 167
>gi|312232841|gb|ADQ53749.1| ribosomal protein S3 [Croton warmingii]
Length = 415
Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/169 (26%), Positives = 79/169 (46%), Gaps = 12/169 (7%)
Query: 38 KIREYLQCHLKQAGVAK------ILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRK 89
K+ E + + + + ++I+ +N RI++ + +++K+R
Sbjct: 247 KVMELIDKFINLGRIGELIKGIEMMIKIILRNRRILIVKRNRRIPYRYNSYLNEMKKMRS 306
Query: 90 KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFG 145
LSN TN+ + ++ +A+ IAQ I+ QL + FR + + + M+ G
Sbjct: 307 LLSNRTNTNTLIESVKMKSVYQSASPIAQDISFQLRNKTRSFRSIYSKIVKDIPLVMKKG 366
Query: 146 ADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
+G+++ SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 367 VEGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 415
>gi|312232821|gb|ADQ53739.1| ribosomal protein S3 [Croton serratifolius]
Length = 415
Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 46/170 (27%), Positives = 79/170 (46%), Gaps = 13/170 (7%)
Query: 38 KIREYLQCHLKQAGVAK------ILIERTHKNCRIIV---YSARPGLIIGKKGTDIEKIR 88
K+ E ++ + + + ++I +N RI++ + R ++ +R
Sbjct: 246 KVMELIEKFINLGRIGELIKGIEMMIFIILRNRRILIKKKRNKRIPYRYNSFVFKMKFMR 305
Query: 89 KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRF 144
LSN TN+ +L ++ +A+ IAQ I+ QL + FR + V+ M+
Sbjct: 306 SLLSNRTNTNTYLEPVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKK 365
Query: 145 GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
G +G+++ SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 366 GVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 415
>gi|160331719|ref|XP_001712566.1| rps3 [Hemiselmis andersenii]
gi|159766015|gb|ABW98241.1| rps3 [Hemiselmis andersenii]
Length = 246
Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 76/170 (44%), Gaps = 6/170 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E L L G + I + II+ + I+G +G I++I KK
Sbjct: 52 ELLSRELSDEGYTNVEIRKAPLKTEIILKMTQTHSILGSRGRRIKEINGLIKKRFQFDEK 111
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ + V ++ + A A+S+ +L R +V RRA ++S M GA G + SG+L
Sbjct: 112 SLEIYVEKIINKNLCAISQAESLRYKLLRGMVIRRACYSTLKSTMESGAKGCIISVSGKL 171
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
A+ ++T +++G + + + +I+ T G GIK+ + L
Sbjct: 172 R-AQRAKTMKFIDGYIIHSGKPVEDYIEKATRHCFLRQGVIGIKISIMLP 220
>gi|312232769|gb|ADQ53713.1| ribosomal protein S3 [Croton milleri]
Length = 420
Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 4/117 (3%)
Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS 140
+++K+R LSN TN+ +L ++ +A+ IAQ I+ QL + FR + V+
Sbjct: 304 FEMKKMRSLLSNRTNTNTYLESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKD 363
Query: 141 A---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
M+ G +G+++ SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 364 IPLVMKKGVEGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 420
>gi|73987944|ref|XP_860415.1| PREDICTED: similar to 40S ribosomal protein S3 isoform 7 [Canis
familiaris]
Length = 196
Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 63/152 (41%), Gaps = 10/152 (6%)
Query: 72 RPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIAQSIAQQLERRV 128
R ++G+KG I ++ + + L +V + A A+S+ +L +
Sbjct: 7 RTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGL 66
Query: 129 VFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGT 186
RRA ++ M GA G +V+ SG+L G + +++ +++G + + ++D
Sbjct: 67 AVRRACYGVLRFIMESGAKGCEVVVSGKLRG-QRAKSMKFVDGLMIHSGDPVNYYVDTAV 125
Query: 187 AVAETAYGSCGIKVYVSLR----DEVSDSDST 214
G GIKV + L ++
Sbjct: 126 RHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPL 157
>gi|223927290|gb|ACN23258.1| ribosomal protein S3 [Halimeda heteromorpha]
Length = 222
Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/168 (19%), Positives = 69/168 (41%), Gaps = 21/168 (12%)
Query: 12 LGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTH-KNCRIIVYS 70
LG+ S+W+A Y L ED +R L +AG I I R + I++ +
Sbjct: 1 LGITQPHLSQWYASKKYYSKYLLEDHFLRTILPKKYAKAGFENIKISRKIENHIEIVIRA 60
Query: 71 ARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATL--------------- 115
+P + IGKKG +++ +K++ + + +N+ + + L
Sbjct: 61 QKPEIFIGKKGENLKNFQKEIKKLIFK--YRGLNQSRNAQSKSKLRVILHVIRCQTGASS 118
Query: 116 IAQSIAQQLERRVVFRRAM---KRAVQSAMRFGADGVKVIASGRLNGA 160
IA + + LE+R+ ++ K+ ++ + S ++ +
Sbjct: 119 IADFLVENLEKRIPYKIVFVLLKKHLKKIRQRERALRSSTVSTSIDSS 166
>gi|302748883|gb|ADL63921.1| ribosomal protein S3 [Morina longifolia]
Length = 460
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 5/164 (3%)
Query: 32 LLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKL 91
L E K+ E ++ + G+ ++ I+ II+ + R +++K+R L
Sbjct: 298 NLMEKDKVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLL 356
Query: 92 SNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGAD 147
SN T + + ++ +A+ IAQ I+ Q + + FR + V+ M+ G +
Sbjct: 357 SNRTKTNTLIESVKIKSVYQSASPIAQDISFQPKNKTRSFRSIFSQIVKEIPLVMKKGVE 416
Query: 148 GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAET 191
G+++ SGR GAE++RTEC G+ IDY A T
Sbjct: 417 GIRICCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVST 460
>gi|133907821|gb|ABO42370.1| ribosomal protein S3 [Clusia rosea]
Length = 328
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 9/163 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + + + I + + G +++K+R +SN T
Sbjct: 169 KVMELIEKFINLGLIGE---WIKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLVSNRT 225
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151
+ + ++ +A+ IAQ I+ +L +R FR + + V+ M+ G +G+++
Sbjct: 226 KTNTLIESVKIQSVYQSASPIAQDISLKLRNKRRSFRSILSQIVKDILFVMKKGLEGIRI 285
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGR GA+++RTEC G+ IDY A T YG
Sbjct: 286 CCSGRSKGAKIARTECGNYGKTSRNVFNQKIDYAPAEVSTRYG 328
>gi|312232715|gb|ADQ53686.1| ribosomal protein S3 [Croton glandulosus]
Length = 431
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 44/158 (27%), Positives = 74/158 (46%), Gaps = 4/158 (2%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIH 100
E + + +I+++R + Y + I ++K+R LSN TN+ +
Sbjct: 274 EMIIKIFLRNRRIRIIVKRNRRIPYRYNYYLYKMIKINFYLYKMQKMRSLLSNRTNTNTY 333
Query: 101 LSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIASGR 156
L ++ +A+ IAQ I+ QL ++ FR + V+ M+ G +G+++ SGR
Sbjct: 334 LESVKIKSVYQSASPIAQDISFQLRNKKRAFRSIFSQIVKDIPLVMKKGVEGIRICCSGR 393
Query: 157 LNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
L G E++RTEC G+ IDY A T YG
Sbjct: 394 LEGKEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 431
>gi|312232691|gb|ADQ53674.1| ribosomal protein S3 [Croton dioicus]
Length = 470
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS 140
++K+R LSN TN+ + ++ +A+ IAQ I+ QL + FR + V+
Sbjct: 354 NKMKKMRSLLSNRTNTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKD 413
Query: 141 A---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
M+ G +G+++ SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 414 IPLVMKKGVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 470
>gi|312232705|gb|ADQ53681.1| ribosomal protein S3 [Croton floribundus]
Length = 420
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 4/117 (3%)
Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS 140
+++K+R LSN TN+ +L ++ +A+ IAQ I+ QL + FR + V+
Sbjct: 304 FEMKKMRSLLSNRTNTNTYLESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKD 363
Query: 141 A---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
M+ G +G+++ SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 364 IPLVMKKGVEGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 420
>gi|312232655|gb|ADQ53656.1| ribosomal protein S3 [Croton argenteus]
Length = 421
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 4/117 (3%)
Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS 140
+++K+R LSN TN+ +L ++ +A+ IAQ I+ QL + FR + V+
Sbjct: 305 FEMKKMRSLLSNRTNTNTYLESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKD 364
Query: 141 A---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
M+ G +G+++ SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 365 IPLVMKKGVEGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 421
>gi|154343872|ref|XP_001567880.1| 40S ribosomal protein S3 [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134065214|emb|CAM40641.1| putative 40S ribosomal protein S3 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 219
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 73/170 (42%), Gaps = 6/170 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E+L+ L + G + + T I++ + + ++G G I ++ ++ N
Sbjct: 22 EFLKRELAEEGFSGVSYHITTLRTEIVIKATKTREVLGVNGRRIRELTACIQQRFNYKEG 81
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
++ L V V ++A +S+ +L + RRA ++ M GA G +V G++
Sbjct: 82 KLQLYVERVEVRGLSAMAQVESLRFKLLSNLQVRRAAMGIIRYVMESGAKGCEVTVGGKI 141
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
G + +++ + +G + ++ +D G G+KV + L
Sbjct: 142 KG-QRAKSMTFRDGYMIKSGTAHKSFVDSACRHCYMRAGCIGVKVKIMLP 190
>gi|312232801|gb|ADQ53729.1| ribosomal protein S3 [Croton polyandrus]
Length = 421
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS 140
+++K+R LSN TN+ +L ++ +A+ IAQ I+ QL + FR + V+
Sbjct: 305 YEMKKMRSLLSNRTNTNTYLESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKD 364
Query: 141 A---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
M+ G +G+++ SGRL G E++RTEC G+ IDY A T YG
Sbjct: 365 IPLVMKKGVEGIRICCSGRLEGKEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 421
>gi|133907867|gb|ABO42393.1| ribosomal protein S3 [Hymenanthera alpina]
Length = 475
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 80/161 (49%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 316 KVMELIEKFINLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNKTNT 374
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRA---MKRAVQSAMRFGADGVKVIA 153
+ ++ +A+LIAQ I+ QL ++ FR +++ + M+ G +G+++
Sbjct: 375 NTLIESVKIQSVYQSASLIAQEISFQLRNKKREFRSILSQIQKDIPLVMKKGVEGIRICC 434
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RT+C G+ IDY A T YG
Sbjct: 435 SGRLKGAEIARTKCGKSGKPSRNIFNQKIDYAPAEVSTRYG 475
>gi|114590693|ref|XP_001140437.1| PREDICTED: similar to 40S ribosomal protein S3 isoform 4 [Pan
troglodytes]
Length = 231
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/186 (21%), Positives = 75/186 (40%), Gaps = 17/186 (9%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIH 100
E+L L + G + + ++ T II+ + R I G+KG I ++ +
Sbjct: 23 EFLTQELAEDGYSGVEVQVTPTRTEIIILATRTQNIPGEKGRRIRELTAIVQKRFG---- 78
Query: 101 LSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGA 160
P+ + A A+S+ +L + RRA ++ M GA G KV+ASG+L G
Sbjct: 79 -----FPEGSLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCKVVASGKLRG- 132
Query: 161 ELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
+ +++ +++G + + ++ G GIKV D T
Sbjct: 133 QRAKSMKFVDGLMIHSGDPINYYVGTAVCHVLLRQGVLGIKVKFM-----LPWDPTGKTG 187
Query: 219 EHRVVE 224
+ +
Sbjct: 188 PKKPLP 193
>gi|312232789|gb|ADQ53723.1| ribosomal protein S3 [Croton olivaceus]
Length = 266
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 76/161 (47%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G ++ I+ +II+ + R +++K+R LSN TN+
Sbjct: 107 KVIELIEKFINLGGKGEL-IKGIEMMIKIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 165
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 166 NTLIESVKIQSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 225
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE +RT C G+ IDY A T YG
Sbjct: 226 SGRLEGAERARTACGKYGKTSRNVFNQKIDYAPAEVSTRYG 266
>gi|28189605|dbj|BAC56417.1| similar to ribosomal protein S3 [Bos taurus]
Length = 206
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 33/160 (20%), Positives = 69/160 (43%), Gaps = 6/160 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGS 195
G + +++ +++G + + ++D G
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGV 181
>gi|312232709|gb|ADQ53683.1| ribosomal protein S3 [Croton fuscescens]
gi|312232835|gb|ADQ53746.1| ribosomal protein S3 [Croton triqueter]
Length = 421
Score = 79.3 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 40/117 (34%), Positives = 62/117 (52%), Gaps = 4/117 (3%)
Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS 140
+++K+R LSN TN+ +L ++ +A+ IAQ I+ QL + FR + V+
Sbjct: 305 FEMKKMRSLLSNRTNTNTYLESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKD 364
Query: 141 A---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
M+ G +G+++ SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 365 IPLVMKKGVEGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 421
>gi|312232763|gb|ADQ53710.1| ribosomal protein S3 [Croton micans]
Length = 418
Score = 79.3 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 58/117 (49%), Gaps = 4/117 (3%)
Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS 140
+++K+R LSN TN+ +L ++ +A+ IAQ I+ QL + FR + V+
Sbjct: 302 FEMKKMRSLLSNRTNTNTYLESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKD 361
Query: 141 AMRFGAD---GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
G+++ SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 362 IPLVMKKRVEGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 418
>gi|301088585|ref|NP_852625.2| ribosomal protein S3 [Eimeria tenella strain Penn State]
gi|301078342|gb|AAO40226.2| ribosomal protein S3 [Eimeria tenella]
Length = 208
Score = 79.3 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 44/216 (20%), Positives = 85/216 (39%), Gaps = 19/216 (8%)
Query: 1 MGQKINPILFRLGVNCTWNSRW------FARGSEYGALLHEDLKIREYLQCHLKQAGVAK 54
MGQK+NP++FR + + W + + L + + KQ +
Sbjct: 1 MGQKVNPLIFRSKNFPYYINIWNNFKLTYINIKFFLNL--------QLFTKNKKQLNILY 52
Query: 55 ILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN---MTNSEIHLSVNEVPKPEI 111
I + + N I LI K I K K + ++ + + P I
Sbjct: 53 IQNKYYYNNYYIYNIILYSKLIYLKNKQYINKYFIKFIQKNYLKKNKFTFNFVVLKHPLI 112
Query: 112 NATLIAQSIAQQ-LERRVVFRRAMKRAVQSAMRFGA-DGVKVIASGRLNGAELSRTECYL 169
+ I + + + L + R+ + + + + G K I SG++NG+++++ E +
Sbjct: 113 STYFILKYLYNKILYTKNSLRKIIPQIILLINKKYKIKGFKCIISGKINGSQMAKIETFK 172
Query: 170 EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
LQ ++ Y + T YG GIK+++ L
Sbjct: 173 FNESSLQNKILNVKYNSIDVITKYGLLGIKIWLFLN 208
>gi|312232721|gb|ADQ53689.1| ribosomal protein S3 [Croton guildingii subsp. tiarensis]
Length = 426
Score = 79.3 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 4/158 (2%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIH 100
E + +I+++R + Y + I + K+R LSN TN+ +
Sbjct: 269 EMIIKIFLINRRIRIIVKRNRRIPYRYNYYLYKMIKIRFYLYKMHKMRSLLSNRTNTNTY 328
Query: 101 LSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGR 156
L ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++ SGR
Sbjct: 329 LESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKDIPLVMKKGVEGIRICCSGR 388
Query: 157 LNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
L G E++RTEC G+ IDY A T YG
Sbjct: 389 LEGKEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 426
>gi|133907805|gb|ABO42362.1| ribosomal protein S3 [Byrsonima crassifolia]
Length = 467
Score = 79.3 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 44/161 (27%), Positives = 75/161 (46%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + +I+K+R LSN TN+
Sbjct: 308 KVMELIEKFINLGRIGEL-IKAIEMMIEIILIKRKIPYGYNSYLNEIQKMRSLLSNRTNT 366
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 367 NTLIESVKIQSVYQSASPIAQDISFQLRNKTRSFRSIFSKRVKDIPLVMKKGVEGIRISC 426
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGR GAE++RTEC G+ IDY A T YG
Sbjct: 427 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 467
>gi|312232659|gb|ADQ53658.1| ribosomal protein S3 [Croton argyranthemus]
Length = 288
Score = 79.3 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS 140
++K+R LSN TN+ + ++ +A+ IAQ I+ QL + FR + V+
Sbjct: 172 NKMKKMRSLLSNRTNTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKD 231
Query: 141 A---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
M+ G +G+++ SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 232 IPLVMKKGVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 288
>gi|312232791|gb|ADQ53724.1| ribosomal protein S3 [Croton pachysepalus]
Length = 282
Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS 140
+++K+R LSN TN+ +L ++ +A+ IAQ I+ QL + FR + V+
Sbjct: 166 YEMKKMRSLLSNRTNTNTYLESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKD 225
Query: 141 A---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
M+ G +G+++ SGRL G E++RTEC G+ IDY A T YG
Sbjct: 226 IPLVMKKGVEGIRICCSGRLEGKEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 282
>gi|133907875|gb|ABO42397.1| ribosomal protein S3 [Leonia glycycarpa]
Length = 476
Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 5/161 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + R +I+K+R LSN TN+
Sbjct: 317 KVMELIEKFINLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEIQKMRSLLSNKTNT 375
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRA---VQSAMRFGADGVKVIA 153
+ ++ +A+LIAQ I+ QL ++ FR + + M+ G +G+++
Sbjct: 376 NTLIESVKIQSVYQSASLIAQEISFQLRNKKRSFRSIFSKIEKDIPLVMKKGVEGIRICC 435
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
SGRL GAE++RT+C G+ IDY A T YG
Sbjct: 436 SGRLKGAEIARTKCGKSGKPSRNIFNQKIDYAPAEVSTHYG 476
>gi|300708361|ref|XP_002996361.1| hypothetical protein NCER_100555 [Nosema ceranae BRL01]
gi|239605657|gb|EEQ82690.1| hypothetical protein NCER_100555 [Nosema ceranae BRL01]
Length = 214
Score = 78.9 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 37/172 (21%), Positives = 76/172 (44%), Gaps = 6/172 (3%)
Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMT 95
++E + L G + + + ++I+ +P +IG K I +I+ ++
Sbjct: 20 LKELFEKCLINEGFSSLELRLEESPVKVILKVVKPQELIGDKKWKIVQIQHLVASRLSLP 79
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155
+S + + +++V + + A I +++ + +RA +++ GA G V SG
Sbjct: 80 DSNVVVIIDKVVEKGLCPVYQANLIREKMLANIPHKRAANLVLKNTKFAGATGCLVTISG 139
Query: 156 RLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+L G + T+ +LEG V Q R ++ T G GI+V + L
Sbjct: 140 KLKGL-RACTKKFLEGVVIKSGQPSRDYVKKHITTVNTKQGVIGIQVSIMLP 190
>gi|302748533|gb|ADL63747.1| ribosomal protein S3 [Alseuosmia macrophylla]
Length = 431
Score = 78.9 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 40/165 (24%), Positives = 78/165 (47%), Gaps = 6/165 (3%)
Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90
L+ +D K+ + ++ + G+ ++ I+ II+ + + +++K+R
Sbjct: 269 NLIAKD-KVMKLIEKLIDLGGIGEL-IKGIEMMIEIILRNRKIPYGYNFYLNEVKKMRSL 326
Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRA---VQSAMRFGA 146
LSN T + ++ ++ +A+ IAQ I+ Q + FR + ++ M+ G
Sbjct: 327 LSNRTKTNTNIESVKIKSVYQSASPIAQDISFQPRNKTISFRSIFSQIVKDIRLVMKKGV 386
Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAET 191
+G+++ SGR GAE++RTEC G+ IDY A T
Sbjct: 387 EGIRICCSGRSKGAEIARTECGKYGKTSRNVFNQKIDYAPAEVST 431
>gi|73987946|ref|XP_860451.1| PREDICTED: similar to 40S ribosomal protein S3 isoform 8 [Canis
familiaris]
Length = 191
Score = 78.9 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 71/164 (43%), Gaps = 7/164 (4%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYG-SCGI 198
G + +++ +++G + + ++D G G+
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGEQLGV 185
>gi|133907941|gb|ABO42430.1| ribosomal protein S3 [Turnera ulmifolia]
Length = 481
Score = 78.5 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 61/117 (52%), Gaps = 4/117 (3%)
Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS 140
++ K+R LSN TN+ + ++ +A+LIAQ I+ QL + FR + V+
Sbjct: 365 NEMTKMRSLLSNRTNTNTLIESVKIQSVYQSASLIAQDISFQLRNKTRSFRSIFSKIVKD 424
Query: 141 A---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
M+ G G+++ SGRL GAE++RTEC G+ L IDY A T YG
Sbjct: 425 IPLVMKKGVGGIRICCSGRLEGAEIARTECGKYGKTSRNVLYQKIDYAPAEVSTRYG 481
>gi|281206799|gb|EFA80983.1| 40S ribosomal protein S3 [Polysphondylium pallidum PN500]
Length = 221
Score = 78.5 bits (192), Expect = 7e-13, Method: Composition-based stats.
Identities = 44/201 (21%), Positives = 83/201 (41%), Gaps = 12/201 (5%)
Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVY 69
F + + W F + A L+E L RE+ K G + + ++ + II+
Sbjct: 4 FTIKIEKKWRVV-FVADGVFHAELNE-LFTREF----NKDEGYSGVELKTGPASTEIIIR 57
Query: 70 SARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIAQSIAQQLER 126
+++ I+G+ I ++ + + L +V + A A S+ +L
Sbjct: 58 ASKTQAIVGQNARRIHELCSLVQKRFGFAEGTVTLYAEKVQNRGLCAIAQADSLKGKLLL 117
Query: 127 RVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDY 184
+ RRA V M GA G +VI SG+L A+ ++ + +G + Q + +D+
Sbjct: 118 GLPVRRACYAIVHQIMTKGAKGCEVIVSGKLR-AQRAKAMKFTDGYMIKSGQPSQNMVDF 176
Query: 185 GTAVAETAYGSCGIKVYVSLR 205
G+ G+KV + L
Sbjct: 177 ACCHVLLRQGTLGVKVAIMLP 197
>gi|312232843|gb|ADQ53750.1| ribosomal protein S3 [Croton watsonii]
Length = 411
Score = 78.5 bits (192), Expect = 7e-13, Method: Composition-based stats.
Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 12/169 (7%)
Query: 38 KIREYLQCHLKQAGVAKI------LIERTHKNCRIIVYSAR--PGLIIGKKGTDIEKIRK 89
K+ E ++ + + ++ +I+ + +I + R +++K+R
Sbjct: 243 KVMELIEKFINLGRIGELIKGIERMIKIILRKSKIGIKKKRIPYPYRYNFSFFEMKKMRS 302
Query: 90 KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSAMRFGAD- 147
LSN TN+ +L ++ +A+ IAQ I+ QL + FR + V+
Sbjct: 303 LLSNRTNTNTYLESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKDIPLVMKKR 362
Query: 148 --GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
G+++ SGRL GAE++RTEC G+ I+Y A T YG
Sbjct: 363 VEGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIEYAPAEVSTRYG 411
>gi|288191158|gb|ADC43932.1| ribosomal protein S3 [Pimelodendron zoanthogyne]
Length = 485
Score = 78.5 bits (192), Expect = 7e-13, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 75/156 (48%), Gaps = 5/156 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 330 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNT 388
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRV-VFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 389 NTLIESVKIKSVYQSASPIAQDISFQLRNKTISFRSIFSKIVKDIPLVMKKGVEGIRICC 448
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189
SGRL GAE++RTEC G+ IDY A
Sbjct: 449 SGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEV 484
>gi|302749067|gb|ADL64013.1| ribosomal protein S3 [Swietenia macrophylla]
Length = 480
Score = 78.5 bits (192), Expect = 7e-13, Method: Composition-based stats.
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 5/156 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E + + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 325 KVMELIDKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 383
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M G +G+++
Sbjct: 384 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMNKGVEGIRICC 443
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189
SGRL GAE++RTEC G+ IDY A
Sbjct: 444 SGRLEGAEIARTECGKYGKTSCNVFNQKIDYAPAEV 479
>gi|302749029|gb|ADL63994.1| ribosomal protein S3 [Sesamum triphyllum]
Length = 483
Score = 78.5 bits (192), Expect = 7e-13, Method: Composition-based stats.
Identities = 41/160 (25%), Positives = 74/160 (46%), Gaps = 5/160 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + + ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 325 KVMELIEKFIDLGRIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 383
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL +R FR + V++ M+ G G+++
Sbjct: 384 NTLIESVKIKSVYQSASPIAQDISFQLRTKRRSFRSIFSKIVKNIPLVMKKGVTGIRICC 443
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAY 193
+ GAE++RTEC G+ IDY A T Y
Sbjct: 444 AVGSVGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRY 483
>gi|296208655|ref|XP_002751192.1| PREDICTED: 40S ribosomal protein S3-like [Callithrix jacchus]
Length = 242
Score = 78.5 bits (192), Expect = 7e-13, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 71/170 (41%), Gaps = 7/170 (4%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E L L + G + + + T II+ + + ++G+KG I ++ +
Sbjct: 23 ELLTRELAEDGYSGVEVRVTPTRKEIIILATKTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +VP +L Q + +L + RRA ++ M G +V+ SG+L
Sbjct: 83 SVELYAEKVPLEVCAQSLR-QYLHHKLLGGLAVRRACYGVLRFIMESRTKGCEVVVSGKL 141
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
G + +++ +++G + + ++D G GIKV V L
Sbjct: 142 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVRGIKVKVMLP 190
>gi|147667134|gb|ABQ45849.1| ribosomal protein S3 [Malus x domestica]
Length = 51
Score = 78.5 bits (192), Expect = 7e-13, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 157 LNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
++G E++R E EGRVPLQT+RA IDY + T YG GIK+++ + +E
Sbjct: 1 IDGKEIARVEWIREGRVPLQTIRAKIDYCSYAVRTIYGVLGIKIWIFVDEE 51
>gi|302748675|gb|ADL63818.1| ribosomal protein S3 [Crossosoma californicum]
Length = 486
Score = 78.1 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 4/160 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ + I+ II+ + R +++K+R LSN TN+
Sbjct: 328 KVMELIEKFIDLGGIGEF-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 386
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSAMRFGADG--VKVIAS 154
+ ++ +A+ IAQ I+ QL +R FR + V+ G +++ S
Sbjct: 387 NTLIESVKIKSVYQSASPIAQDISFQLRNKRRSFRSIFSKIVKDIPLVMKKGEGIRICCS 446
Query: 155 GRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
GRL GAE++RTEC G+ +Y A T YG
Sbjct: 447 GRLKGAEIARTECGKYGKTSRYVFNQENNYAPAEVSTRYG 486
>gi|224999229|gb|ACN78386.1| ribosomal protein S3 [Codium fragile]
Length = 52
Score = 78.1 bits (191), Expect = 8e-13, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 156 RLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
R NGA+++RTE +G+VPLQ+L A+IDY A+T YG GIK+++
Sbjct: 2 RFNGADIARTEWIRKGQVPLQSLAANIDYCCRTAKTIYGILGIKIWIFQP 51
>gi|312232805|gb|ADQ53731.1| ribosomal protein S3 [Croton punctatus]
Length = 276
Score = 78.1 bits (191), Expect = 8e-13, Method: Composition-based stats.
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS 140
++K+R LSN TN+ + ++ +A+ IAQ I+ QL + FR + V+
Sbjct: 160 NKMKKMRSLLSNRTNTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKD 219
Query: 141 A---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
M+ G +G+++ SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 220 IPLVMKKGVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 276
>gi|302749073|gb|ADL64016.1| ribosomal protein S3 [Tapiscia sinensis]
Length = 480
Score = 78.1 bits (191), Expect = 9e-13, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 5/156 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ I++ + + +++K+R LSN TN+
Sbjct: 325 KVMELIEKFINLGGIGEL-IKGIEMMIEILLRNRKMPYGYNYYLNEVKKMRSLLSNRTNT 383
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + V+ M+ G +G+++
Sbjct: 384 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 443
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189
SGRL GAE++RTEC G+ IDY A
Sbjct: 444 SGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEV 479
>gi|312232727|gb|ADQ53692.1| ribosomal protein S3 [Croton hirtus]
Length = 418
Score = 78.1 bits (191), Expect = 9e-13, Method: Composition-based stats.
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS 140
++K+R LSN TN+ +L ++ +A+ IAQ I+ QL + FR + V+
Sbjct: 302 YKMKKMRSLLSNRTNTNTYLESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKD 361
Query: 141 A---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
M+ G +G+++ SGRL G E++RTEC G+ IDY A T YG
Sbjct: 362 IPLVMKKGVEGIRICCSGRLEGKEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 418
>gi|312232765|gb|ADQ53711.1| ribosomal protein S3 [Croton michauxii var. elliptica]
gi|312232767|gb|ADQ53712.1| ribosomal protein S3 [Croton michauxii var. elliptica]
Length = 288
Score = 77.7 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS 140
++K+R LSN TN+ + ++ +A+ IAQ I+ QL + FR + V+
Sbjct: 172 NKMKKMRSLLSNRTNTNTLIESVKMKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKD 231
Query: 141 A---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
M+ G +G+++ SGRL GAE++RTEC G+ IDY A T YG
Sbjct: 232 IPLVMKKGVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEVSTRYG 288
>gi|67467661|ref|XP_649921.1| 40S ribosomal protein S3 [Entamoeba histolytica HM-1:IMSS]
gi|67484576|ref|XP_657508.1| 40S ribosomal protein S3 [Entamoeba histolytica HM-1:IMSS]
gi|56466448|gb|EAL44535.1| 40S ribosomal protein S3, putative [Entamoeba histolytica
HM-1:IMSS]
gi|56474761|gb|EAL52118.1| 40S ribosomal protein S3, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 244
Score = 77.7 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 48/213 (22%), Positives = 79/213 (37%), Gaps = 17/213 (7%)
Query: 14 VNCTWNSRWF-ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSAR 72
++ F A G Y L E LQ L G + + + + +II+ + R
Sbjct: 19 ISRKHK---FVADGVFYAEL-------NELLQRELSADGYSGVEVRKNGSKFQIIIRATR 68
Query: 73 PGLIIGKKGTDIEKIRKK---LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV 129
IIG KG I ++ +I L V +V + A+SI ++ +
Sbjct: 69 TTNIIGDKGRRIHELTNLLIARFGFPKDKIELYVEKVLARGLCPVSQAESIKYKIAEGLP 128
Query: 130 FRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTA 187
RRA+ ++ M GA G +V SG+L G + ++ + EG + R
Sbjct: 129 VRRAVGSVMRLIMDSGAKGCEVSISGKLRG-QRAQGMVFKEGYMIKSGNATRQFYSSAVR 187
Query: 188 VAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
G GIKV + L + S +
Sbjct: 188 CVLLRMGIIGIKVTIMLDTDPSGKNGPAARIPD 220
>gi|164598968|gb|ABX72228.2| ribosomal protein S3 [Ostrinia furnacalis]
Length = 166
Score = 77.7 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 37/146 (25%), Positives = 69/146 (47%), Gaps = 8/146 (5%)
Query: 66 IIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQ 122
II+ + R ++G+KG I ++ +K N+ + L +V + A A+S+
Sbjct: 1 IIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYAEKVATRGLCAIAQAESLRY 60
Query: 123 QLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHI 182
+L + RRA ++ M GA G +V+ SG+L G + +++ +++G + + +
Sbjct: 61 KLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVDGLM-IHSGDPCN 118
Query: 183 DY---GTAVAETAYGSCGIKVYVSLR 205
DY T G GIKV + L
Sbjct: 119 DYVNTATRHVLLRQGVLGIKVKIMLP 144
>gi|167389197|ref|XP_001738857.1| 40S ribosomal protein S3-3 [Entamoeba dispar SAW760]
gi|165897685|gb|EDR24767.1| 40S ribosomal protein S3-3, putative [Entamoeba dispar SAW760]
Length = 244
Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 48/213 (22%), Positives = 79/213 (37%), Gaps = 17/213 (7%)
Query: 14 VNCTWNSRWF-ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSAR 72
++ F A G Y L E LQ L G + + + + +II+ + R
Sbjct: 19 ISRKHK---FVADGVFYAEL-------NELLQRELSADGYSGVEVRKNGSKFQIIIRATR 68
Query: 73 PGLIIGKKGTDIEKIRKK---LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV 129
IIG KG I ++ +I L V +V + A+SI ++ +
Sbjct: 69 TTNIIGDKGRRIHELTNLLIARFGFPKDKIELYVEKVLARGLCPVSQAESIKYKIAEGLP 128
Query: 130 FRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTA 187
RRA+ ++ M GA G +V SG+L G + ++ + EG + R
Sbjct: 129 VRRAVGSVMRLIMESGAKGCEVSISGKLRG-QRAQGMVFKEGYMIKSGNATRQFYSSAVR 187
Query: 188 VAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
G GIKV + L + S +
Sbjct: 188 CVLLRMGIIGIKVTIMLDTDPSGKNGPAARIPD 220
>gi|290562954|gb|ADD38871.1| 40S ribosomal protein S3-B [Lepeophtheirus salmonis]
Length = 229
Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/186 (19%), Positives = 75/186 (40%), Gaps = 11/186 (5%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT---NS 97
E L+ L + G + I++ TH +I+ + + ++G + I ++ +
Sbjct: 23 EMLKRELAEDGYSGIMVRGTHPKTEVIISATKTQNVLGDESKRIRELTSLIEKRFAFEQG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L ++V I+A A+S+ +L + R+A ++ M A G +VI SG++
Sbjct: 83 TLSLYADKVAVRGISAVAQAESLKYRLTGGMPVRKACYAVLKQIMESEAKGGEVIVSGKI 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTI 215
G + ++ + +G + + +I G GIKV + D D
Sbjct: 143 KG-QRAKAMKFTDGLMIHSGDPVNYYIAKAVRHVLLPQGILGIKVKIM-----LDHDPAG 196
Query: 216 PAAEHR 221
+
Sbjct: 197 KTGCKK 202
>gi|226482822|emb|CAX79378.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 202
Score = 77.3 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/176 (18%), Positives = 72/176 (40%), Gaps = 11/176 (6%)
Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPE 110
K + + K +I+ + + ++G+ I ++ L + L ++
Sbjct: 10 KRKVRESRKYTEVIILATKTQSVLGEGSRRIRELTSVLQKRFGFPDGTLGLFAEKMTFRG 69
Query: 111 INATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLE 170
++A A+S+ +L + R+A ++ M GA G +VI SG++ G + ++ + +
Sbjct: 70 LSAIAQAESLRYKLTYGLPVRKACYGILRFIMESGARGAEVIVSGKIKG-QRAKAMKFCD 128
Query: 171 GRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
G + + ++D + G GIKV + D DS+ + +
Sbjct: 129 GLMIHSGDPVNYYVDKAVRHVQLPQGILGIKVKIM-----MDHDSSGKKGPRKPLP 179
>gi|288191126|gb|ADC43916.1| ribosomal protein S3 [Endodesmia calophylloides]
Length = 261
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 5/156 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + + +++K+R LSN TN+
Sbjct: 106 KVMELIEKLINLGGIGEL-IKGIEMMIEIILRNRKISYRYNSYLNEMKKMRSLLSNRTNT 164
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQL-ERRVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL ++R FR + +Q M+ G+++
Sbjct: 165 NTLIESVKIQSVYQSASPIAQDISFQLRKKRRSFRSIFSKILQDIPLVMKKRVKGIRICC 224
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189
SGRL GA+++RTEC G+ IDY A
Sbjct: 225 SGRLKGAKIARTECGNYGKTSRNVFNQKIDYAPAEV 260
>gi|167394938|ref|XP_001741154.1| 40S ribosomal protein S3-3 [Entamoeba dispar SAW760]
gi|165894380|gb|EDR22402.1| 40S ribosomal protein S3-3, putative [Entamoeba dispar SAW760]
Length = 250
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 48/213 (22%), Positives = 79/213 (37%), Gaps = 17/213 (7%)
Query: 14 VNCTWNSRWF-ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSAR 72
++ F A G Y L E LQ L G + + + + +II+ + R
Sbjct: 25 ISRKHK---FVADGVFYAEL-------NELLQRELSADGYSGVEVRKNGSKFQIIIRATR 74
Query: 73 PGLIIGKKGTDIEKIRKK---LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV 129
IIG KG I ++ +I L V +V + A+SI ++ +
Sbjct: 75 TTNIIGDKGRRIHELTNLLIARFGFPKDKIELYVEKVLARGLCPVSQAESIKYKIAEGLP 134
Query: 130 FRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTA 187
RRA+ ++ M GA G +V SG+L G + ++ + EG + R
Sbjct: 135 VRRAVGSVMRLIMESGAKGCEVSISGKLRG-QRAQGMVFKEGYMIKSGNATRQFYSSAVR 193
Query: 188 VAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
G GIKV + L + S +
Sbjct: 194 CVLLRMGIIGIKVTIMLDTDPSGKNGPAARIPD 226
>gi|302748812|gb|ADL63886.1| ribosomal protein S3 [Fouquieria columnaris]
Length = 465
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 6/163 (3%)
Query: 31 ALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90
LL +D K+ E ++ + G+ ++ I+ II+ + R +++K+R
Sbjct: 304 NLLGKD-KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSL 361
Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGA 146
LSN TN+ + ++ +A+ IAQ I+ Q + FR + V+ M+ G
Sbjct: 362 LSNRTNTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGV 421
Query: 147 DGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189
+G+++ SGR GAE++RTEC G+ IDY A
Sbjct: 422 EGIRICCSGRSEGAEIARTECGKYGKTSRNVFNQKIDYAPAEV 464
>gi|330040462|ref|XP_003239924.1| 40S ribosomal protein S3 [Cryptomonas paramecium]
gi|327206850|gb|AEA39026.1| 40S ribosomal protein S3 [Cryptomonas paramecium]
Length = 210
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/187 (20%), Positives = 87/187 (46%), Gaps = 6/187 (3%)
Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLII---GKKGTDIEKIRKKLSNMT 95
+ E L L++ G + + ++++ +I+ + R +I GK+ +I + KK +
Sbjct: 18 VNELLSRELREEGYSGMELKKSSIKTELILKTVRTKQMIISGGKRIREITLLVKKRFGLE 77
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASG 155
+S +++ V +V + +++ A+ + +L + + R+A ++S M GA G + SG
Sbjct: 78 DSNLNIYVEKVINRGLVSSIQAEFLRYKLLKGITTRKACYSVLRSIMESGAKGCLITISG 137
Query: 156 RLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDS 213
+L A+ +++ + EG + Q ++ +I T G GIK+ + L +
Sbjct: 138 KLR-AQRAKSMKFTEGYIIHSGQAVKNYISSSTRHCILKQGVIGIKISIMLPWDPYGKKG 196
Query: 214 TIPAAEH 220
+
Sbjct: 197 PVNPLPD 203
>gi|238683661|gb|ACR54109.1| ribosomal protein S3 [Palaemonetes varians]
Length = 189
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 59/131 (45%), Gaps = 3/131 (2%)
Query: 77 IGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKR 136
G++ ++ + ++ + + L +V + + A A+S+ +L + RRA
Sbjct: 8 KGRRIRELTSLVQRRFGFADGTVELYAEKVAQRGLCAIAQAESLRYKLVGGLAVRRACYG 67
Query: 137 AVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYG 194
++ M GA G +V+ SG+L G + +++ +G + + R ++D G
Sbjct: 68 VLRFIMESGAKGCEVVVSGKLRG-QRAKSMKSTDGLMIHSGEPRRHYVDTAVRHVHLRQG 126
Query: 195 SCGIKVYVSLR 205
GIKV + L
Sbjct: 127 VLGIKVKIMLP 137
>gi|288191245|gb|ADC43975.1| ribosomal protein S3 [Idesia polycarpa]
Length = 478
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/149 (29%), Positives = 70/149 (46%), Gaps = 4/149 (2%)
Query: 43 LQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLS 102
L+ G LI+ II+ + R +++K+R LSN TN+ ++
Sbjct: 330 LRDKFINLGGIGELIKGIEMMIEIILRNRRIPYGYNSYLNEMKKMRSLLSNRTNTNTLIT 389
Query: 103 VNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIASGRLN 158
++ +A+LIAQ I+ QL +R FR + V+ M +G+++ SGRL
Sbjct: 390 SVKIKSVYQSASLIAQDISFQLRNKRRSFRSIFSKIVKDLSFLMNKWVEGIRICCSGRLK 449
Query: 159 GAELSRTECYLEGRVPLQTLRAHIDYGTA 187
GAE++RTEC G+ IDY A
Sbjct: 450 GAEIARTECGKYGKTSCNVFNQKIDYAPA 478
>gi|149068844|gb|EDM18396.1| rCG40478, isoform CRA_f [Rattus norvegicus]
Length = 181
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/159 (20%), Positives = 69/159 (43%), Gaps = 6/159 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYG 194
G + +++ +++G + + ++D G
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQG 180
>gi|297841011|ref|XP_002888387.1| hypothetical protein ARALYDRAFT_475617 [Arabidopsis lyrata subsp.
lyrata]
gi|297334228|gb|EFH64646.1| hypothetical protein ARALYDRAFT_475617 [Arabidopsis lyrata subsp.
lyrata]
Length = 109
Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 30/107 (28%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Query: 51 GVAKILIERTHKNCRIIVYSARPGLIIGKKGT---DIEKIRKKLSNMTNSEIHLSVNEVP 107
G+A+I I++ +II+Y P L+I K +++ +K N N ++++++ +
Sbjct: 3 GIARIEIQKRIDLIQIIIYMGFPKLLIEDKPRRVEELQMNVQKELNCVNRKLNIAITRIS 62
Query: 108 KPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIAS 154
P + ++A+ IA QL+ RV FR+AMK+A++ + G++V +
Sbjct: 63 NPYGDPNILAEFIAGQLKNRVSFRKAMKKAIELTEQANTKGIQVQIA 109
>gi|312232681|gb|ADQ53669.1| ribosomal protein S3 [Croton coryi]
Length = 276
Score = 76.2 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 4/117 (3%)
Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQS 140
++K+R LSN TN+ + ++ +A+ IAQ I+ QL + FR + V+
Sbjct: 160 NKMKKMRSLLSNRTNTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKD 219
Query: 141 A---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYG 194
M+ G +G+++ SGRL GAE++RT+C G+ IDY A T YG
Sbjct: 220 IPLVMKKGVEGIRICCSGRLKGAEIARTKCGKYGKTSRNVFNQKIDYAPAEVSTRYG 276
>gi|159481344|ref|XP_001698739.1| hypothetical protein CHLREDRAFT_18599 [Chlamydomonas reinhardtii]
gi|158273450|gb|EDO99239.1| predicted protein [Chlamydomonas reinhardtii]
Length = 1125
Score = 75.8 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 4/113 (3%)
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGAD---GVKVI 152
++H +A A +A+ LE + R + + +A V+V
Sbjct: 141 GQQVHFQPFVFNDIFQSAPAAATYVAEALESGSAWGRIERFFLAAAEADAGKLVAAVRVE 200
Query: 153 ASGRL-NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
+GR+ A+++ T+ + G + L +L + +DYGTA A T G GIKV++
Sbjct: 201 VAGRIGRKADMAATKSWAWGDLRLASLTSKLDYGTAAANTRMGVLGIKVWIRY 253
>gi|213025796|ref|ZP_03340243.1| 30S ribosomal protein S3 [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 52
Score = 75.8 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 36/52 (69%), Positives = 41/52 (78%)
Query: 137 AVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAV 188
AVQ+AMR GA G+KV SGRL GAE++RTE Y EGRVPL TLRA IDY T+
Sbjct: 1 AVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRADIDYNTSE 52
>gi|323398677|ref|YP_004222752.1| ribosomal protein S3 [Glaucocystis nostochinearum]
gi|321401370|gb|ADW83124.1| ribosomal protein S3 [Glaucocystis nostochinearum]
Length = 238
Score = 75.4 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 38/218 (17%), Positives = 83/218 (38%), Gaps = 16/218 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFA---RGSEYGALLHEDLKIREYLQCHLKQAGVAKILI 57
MG+KINPI+FR N TW W + EY A + I +YL+ + I
Sbjct: 1 MGKKINPIIFRYNTNQTWQYIWHTPINKKHEYSAQFFINFFIDKYLKNIFINKNIVISKI 60
Query: 58 ERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA 117
+I ++ + ++ + + K +I +
Sbjct: 61 FLLSNWNKIKIFFYLFPYLNIINNKIEINFKQSFIKKIKKNTISILQKYLKKKIFLNIFT 120
Query: 118 Q------------SIAQQLER-RVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSR 164
+++ ++++ + + K ++ G+K++ GRL + +
Sbjct: 121 DKNCIINEDALISNLSFEIKKTKNIKNIIKKLFIKIKNYPQIIGLKILIKGRLTKNDQAT 180
Query: 165 TECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202
+G++P T++++I + T G+ GIK+++
Sbjct: 181 IIYLQKGKIPFNTIKSNILFAKNWIITRRGTYGIKIWI 218
>gi|307683362|dbj|BAJ19667.1| ribosomal protein S3 [Pseudolarix kaempferi]
Length = 66
Score = 75.4 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 29/48 (60%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLK 48
M QKINP+ FRLGV S WFA+ Y L ED KIR ++ +++
Sbjct: 1 MAQKINPLGFRLGVTQNDRSHWFAQQRNYSKDLREDQKIRTCIENYVR 48
>gi|145541820|ref|XP_001456598.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424410|emb|CAK89201.1| unnamed protein product [Paramecium tetraurelia]
Length = 230
Score = 75.4 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 40/203 (19%), Positives = 76/203 (37%), Gaps = 7/203 (3%)
Query: 25 RGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDI 84
+ + + ++ +L L AG A ++ T I + +A + G +G +
Sbjct: 10 KKKFVADGVFQ-AELHSFLSRALTDAGYAGFVVRTTPVQTDIEIKAANTAGVTGPEGRKL 68
Query: 85 EKIRKKLSNMT---NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSA 141
++ + + L V V + A A+S+ +L +V R A ++
Sbjct: 69 RELTSLIQKRFGYAKEALQLIVARVQSKGLCAPAQAESLKTKLLAQVPVRTAANAVLKQI 128
Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIK 199
M GA G + I SG+L G + +++ Y G + Q + ID G G+K
Sbjct: 129 MADGAIGAECIISGKL-GQQRAKSMKYRAGYIISTGQPKKDLIDVAVRHCFFKQGIIGVK 187
Query: 200 VYVSLRDEVSDSDSTIPAAEHRV 222
V + + S +V
Sbjct: 188 VKIYRPYDPSGKKGIPIEVPDKV 210
>gi|145536261|ref|XP_001453858.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421591|emb|CAK86461.1| unnamed protein product [Paramecium tetraurelia]
Length = 230
Score = 75.4 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 40/203 (19%), Positives = 76/203 (37%), Gaps = 7/203 (3%)
Query: 25 RGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDI 84
+ + + ++ +L L AG A ++ T I + +A + G +G +
Sbjct: 10 KKKFVADGVFQ-AELHSFLSRALTDAGYAGFVVRTTPVQTDIEIKAANTAGVTGPEGRKL 68
Query: 85 EKIRKKLSNMT---NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSA 141
++ + + L V V + A A+S+ +L +V R A ++
Sbjct: 69 RELTSLIQKRFGYAKEALQLIVARVQSKGLCAPAQAESLKTKLLAQVPVRTAANAVLKQI 128
Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIK 199
M GA G + I SG+L G + +++ Y G + Q + ID G G+K
Sbjct: 129 MADGAIGAECIISGKL-GQQRAKSMKYRAGYIISTGQPKKDLIDVAVRHCFFKQGIIGVK 187
Query: 200 VYVSLRDEVSDSDSTIPAAEHRV 222
V + + S +V
Sbjct: 188 VKIYRPYDPSGKKGIPIEVPDKV 210
>gi|307683365|dbj|BAJ19669.1| ribosomal protein S3 [Tsuga chinensis]
Length = 63
Score = 75.4 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 29/48 (60%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLK 48
M QKINP+ FRLGV S WFA+ Y L ED KIR ++ +++
Sbjct: 1 MAQKINPLGFRLGVTQNDRSHWFAQQRNYSKDLREDQKIRTCIENYVR 48
>gi|302748581|gb|ADL63771.1| ribosomal protein S3 [Bistorta sp. Qiu 06003]
Length = 460
Score = 75.4 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 5/156 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ + ++ + G+ ++ I+ II+ + R +++K+R LSN T +
Sbjct: 306 KVMKLIEKFIDLGGIEEL-IKGIEMMIEIILKNRRIPYGYNFYLNEVKKMRSLLSNRTKT 364
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLER-RVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q ++ R FR + V+ M+ G +G+++
Sbjct: 365 NTLMESVKIKSVYQSASPIAQDISFQPKKKRRSFRSIFSKIVKDIPLGMKNGIEGIRICC 424
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189
SGRL GAE++RTEC G+ IDY A
Sbjct: 425 SGRLAGAEIARTECGKYGKTSCNVFNKKIDYAAAEV 460
>gi|162605846|ref|XP_001713438.1| 40S ribosomal protein S3 [Guillardia theta]
gi|13794370|gb|AAK39747.1|AF083031_104 40S ribosomal protein S3 [Guillardia theta]
Length = 218
Score = 75.0 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 49/204 (24%), Positives = 94/204 (46%), Gaps = 19/204 (9%)
Query: 8 ILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRII 67
+ +RL + + A G Y I E+L+ LK+ G + I I++ + II
Sbjct: 2 LGYRLSLKKKFV----ADGVVYSE-------INEFLERELKENGFSGIKIKKKIEKVEII 50
Query: 68 VYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQL 124
+ S++ IIG KG I ++ KK N +++ L V ++ + A+S+ ++
Sbjct: 51 IKSSKAHTIIGFKGKRIRELNVLLKKRFNFGENKLVLYVEKINNRNLCPINQAESLRYKI 110
Query: 125 ERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDY 184
R V R+A ++S + GA G + SG+L A+ ++T +++G + + + + +Y
Sbjct: 111 LRGFVLRKACYSILRSTIEAGAKGCIISVSGKLR-AQRAKTMKFMDGYI-IHSGKPSEEY 168
Query: 185 ---GTAVAETAYGSCGIKVYVSLR 205
G GIK+ + L
Sbjct: 169 TKSAIRHCLLPQGVIGIKISIMLP 192
>gi|302748655|gb|ADL63808.1| ribosomal protein S3 [Claytonia virginica]
Length = 449
Score = 74.6 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 45/160 (28%), Positives = 78/160 (48%), Gaps = 5/160 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ + ++ + G+ + LI+ II+ + R +++K+R LSN T +
Sbjct: 291 KVMKLIEKCIDLGGI-RELIKGIEMMIEIILKNRRIPYGYNSYLNEVKKMRSFLSNKTKT 349
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+S ++ +A+ IAQ I Q + +R FR+ + VQ+ M+ G +G+++
Sbjct: 350 NTLISSKKIQSVYQSASPIAQDIYFQPKNKRRSFRKIFSKIVQNIPLVMKKGVEGIRISC 409
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAY 193
GRL GAE++RTEC G+ L ID A T Y
Sbjct: 410 PGRLKGAEIARTECGKYGKTSCNVLYQKIDECFAEFSTRY 449
>gi|149068849|gb|EDM18401.1| rCG40478, isoform CRA_k [Rattus norvegicus]
Length = 201
Score = 74.6 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/158 (20%), Positives = 68/158 (43%), Gaps = 6/158 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAY 193
G + +++ +++G + + ++D
Sbjct: 143 RG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQ 179
>gi|302748551|gb|ADL63756.1| ribosomal protein S3 [Aphloia theiformis]
Length = 479
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 4/154 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 327 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 385
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSAMRFGADG--VKVIAS 154
+ ++ +A+ IAQ I+ QL + FR + + G +++ S
Sbjct: 386 NTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIAKDIPLVMKKGVGIRICCS 445
Query: 155 GRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAV 188
GRL GAE++RTEC G+ IDY A
Sbjct: 446 GRLKGAEIARTECGKYGKTSRSVFNQKIDYAPAE 479
>gi|302749001|gb|ADL63980.1| ribosomal protein S3 [Ruptiliocarpon caracolito]
Length = 480
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 5/152 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 329 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNFYLNEVKKMRSLLSNRTNT 387
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ QL + FR + + + M+ G +G+++
Sbjct: 388 NTLMESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSNIVKDIPLVMKKGVEGIRICC 447
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYG 185
SGR GAE++RTEC G+ IDY
Sbjct: 448 SGRSEGAEIARTECGKYGKTSRNVFNQKIDYA 479
>gi|152060885|sp|Q74MZ4|RS3_NANEQ RecName: Full=30S ribosomal protein S3P
Length = 230
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/181 (24%), Positives = 89/181 (49%), Gaps = 6/181 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIH 100
E+++ +L+ A V+K++I +T R+I+YSARP +I ++ + K+ + + I
Sbjct: 21 EFIRLYLRGANVSKVIIRQTPIVNRVIIYSARPKMISEERKAHLAKLLELKFGLEKPVIE 80
Query: 101 LSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSAMRFGADGVKVIASGRLNG 159
+ + P ++A +IA+ +A +ER + +RR +R +++ M GA G +++ +GRL+G
Sbjct: 81 VLP--IENPNLDAHVIAERLAMGIERNIRAYRRLAQRYLETIMNAGAIGAEIVIAGRLSG 138
Query: 160 AELSRTECYLEGRVPLQTLRA--HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
+ +T + G + +D +A G GI V + D +
Sbjct: 139 -QRGKTWRFKAGNLRKTGTIGQFELDRAFNIAYLKPGVAGIHVTILKPDAEIPDIIEFKS 197
Query: 218 A 218
Sbjct: 198 P 198
>gi|239811646|gb|ACS27133.1| ribosomal protein S3 [Heterosigma akashiwo]
gi|239811686|gb|ACS27172.1| ribosomal protein S3 [Heterosigma akashiwo]
Length = 312
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/191 (21%), Positives = 71/191 (37%), Gaps = 29/191 (15%)
Query: 27 SEY--GALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVY----SARPGLIIGKK 80
+ +L +K+ L + + + ++I++ S L K
Sbjct: 132 KNFLKANMLQ--IKVSSLLFFSFGKLESLAKALLNFTQVQKVIIHFKDLSQFVKLPNIKS 189
Query: 81 GTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
+ + L + N + A LIA + LE + +R+ + + +
Sbjct: 190 SSGTFEDWVYLFTLMN-----------NTKPTAMLIANYLKLILENKS-YRKRQRFFLNN 237
Query: 141 ---------AMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAET 191
A+ G+K+ GRLNG S G +PLQTL IDY A T
Sbjct: 238 LRRFLIQNPALLSKVKGIKIQVKGRLNGRNRSTIYTIQLGSLPLQTLSKEIDYTFVPAFT 297
Query: 192 AYGSCGIKVYV 202
YG+ GIKV++
Sbjct: 298 LYGAFGIKVWI 308
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 13/79 (16%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +P+ RLG TW S+WF++ S + L + K LI+
Sbjct: 1 MGQKAHPLSSRLGKFLTWESQWFSKNSRVASHLI-------------FKNYTLKTLIQSF 47
Query: 61 HKNCRIIVYSARPGLIIGK 79
N +I+++S
Sbjct: 48 FFNNKILIHSFESRYFNNN 66
>gi|41615265|ref|NP_963763.1| hypothetical protein NEQ481 [Nanoarchaeum equitans Kin4-M]
gi|40068989|gb|AAR39324.1| NEQ481 [Nanoarchaeum equitans Kin4-M]
Length = 236
Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/181 (24%), Positives = 89/181 (49%), Gaps = 6/181 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIH 100
E+++ +L+ A V+K++I +T R+I+YSARP +I ++ + K+ + + I
Sbjct: 27 EFIRLYLRGANVSKVIIRQTPIVNRVIIYSARPKMISEERKAHLAKLLELKFGLEKPVIE 86
Query: 101 LSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSAMRFGADGVKVIASGRLNG 159
+ + P ++A +IA+ +A +ER + +RR +R +++ M GA G +++ +GRL+G
Sbjct: 87 VLP--IENPNLDAHVIAERLAMGIERNIRAYRRLAQRYLETIMNAGAIGAEIVIAGRLSG 144
Query: 160 AELSRTECYLEGRVPLQTLRA--HIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
+ +T + G + +D +A G GI V + D +
Sbjct: 145 -QRGKTWRFKAGNLRKTGTIGQFELDRAFNIAYLKPGVAGIHVTILKPDAEIPDIIEFKS 203
Query: 218 A 218
Sbjct: 204 P 204
>gi|288871942|dbj|BAI70628.1| ribosomal protein S3 [Heterosigma akashiwo]
Length = 312
Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/191 (21%), Positives = 71/191 (37%), Gaps = 29/191 (15%)
Query: 27 SEY--GALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVY----SARPGLIIGKK 80
+ +L +K+ L + + + ++I++ S L K
Sbjct: 132 KNFLKANMLQ--IKVSSLLFFSFGKLESLAKALLNFTQVQKVIIHFKDLSQFVKLPNIKS 189
Query: 81 GTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
+ + L + N + A LIA + LE + +R+ + + +
Sbjct: 190 SSGTFEDWVYLFTLMN-----------NTKPTAMLIANYLKLILENKS-YRKRQRFFLNN 237
Query: 141 ---------AMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAET 191
A+ G+K+ GRLNG S G +PLQTL IDY A T
Sbjct: 238 LRRFLIQNPALLSKVKGIKIQVKGRLNGRNRSTIYTIQLGSLPLQTLSKEIDYTFVPAFT 297
Query: 192 AYGSCGIKVYV 202
YG+ GIKV++
Sbjct: 298 LYGAFGIKVWI 308
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 13/79 (16%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MGQK +P+ RLG TW S+WF++ S + L + K LI+
Sbjct: 1 MGQKAHPLSSRLGKFLTWESQWFSKNSRVASHLI-------------FKNYTLKTLIQSF 47
Query: 61 HKNCRIIVYSARPGLIIGK 79
N +I+++S
Sbjct: 48 FFNNKILIHSFESRYFNNN 66
>gi|302748945|gb|ADL63952.1| ribosomal protein S3 [Peumus boldus]
Length = 471
Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 9/154 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E + + G+ + I + + G +++KIR LSN T
Sbjct: 320 KVMELIDKFIDLGGIGE---WIKGIEMMIEIILRNSRIPYGYNSYLNEVQKIRSLLSNRT 376
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ Q + FR + VQ M G +G+++
Sbjct: 377 NTNTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSQIVQDIKLVMPKGVEGIRI 436
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYG 185
SGR GAE++RTEC G+ IDY
Sbjct: 437 CCSGRSEGAEIARTECGKYGKTSRNVFHQKIDYA 470
>gi|312232773|gb|ADQ53715.1| ribosomal protein S3 [Croton monanthogynus]
Length = 409
Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 12/164 (7%)
Query: 38 KIREYLQCHLKQAGVAKI------LIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRK 89
K+ E ++ + + ++ +I+ + +I + R +++K+R
Sbjct: 245 KVMELIEKFINLGRIGELIKGIERMIKIILRKSKIGIKKKRIPYPYRYNFYFIEMKKMRS 304
Query: 90 KLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFG 145
LSN TN+ +L ++ +A+ IAQ I+ QL + FR + V+ M+ G
Sbjct: 305 LLSNRTNTNTYLESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKDIPLVMKKG 364
Query: 146 ADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189
+G+++ SGRL GAE++RTEC G+ IDY A
Sbjct: 365 VEGIRICCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYAPAEV 408
>gi|302851104|ref|XP_002957077.1| hypothetical protein VOLCADRAFT_107510 [Volvox carteri f.
nagariensis]
gi|300257633|gb|EFJ41879.1| hypothetical protein VOLCADRAFT_107510 [Volvox carteri f.
nagariensis]
Length = 968
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRA---MKRAVQSAMRFGADGVKVI 152
+H +A+ A +A LE + R AV++ GV+V
Sbjct: 121 GQNVHFQPFVFSNIFQSASAAATYVAAALEGGANWGRVERFFLAAVEAEDNNIVRGVRVA 180
Query: 153 ASGRLN-GAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
SGR+ A+++ T+ + G + L+ L +DYG A A T G+ G+KV++ +
Sbjct: 181 VSGRMGLKADMAATKVWEWGEMSLRALSDRLDYGIATANTRLGTLGVKVWIRYK 234
>gi|3642663|gb|AAC36521.1| ribosomal protein S3 [Mus musculus]
Length = 123
Score = 73.1 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 54/123 (43%), Gaps = 3/123 (2%)
Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSA 141
++ + +K + L +V + A A+S+ +L + RRA ++
Sbjct: 2 RELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFI 61
Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIK 199
M GA G +V+ SG+L G + +++ +++G + + ++D G GIK
Sbjct: 62 MESGAKGCEVVVSGKLRG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIK 120
Query: 200 VYV 202
V +
Sbjct: 121 VKI 123
>gi|9022435|gb|AAF82383.1|AF281313_1 ribosomal protein S3 [Homo sapiens]
Length = 158
Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 7/120 (5%)
Query: 101 LSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGA 160
L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L G
Sbjct: 1 LYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG- 59
Query: 161 ELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDSDST 214
+ +++ +++G + + ++D G GIKV + L ++
Sbjct: 60 QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPL 119
>gi|215260015|gb|ACJ64492.1| 40S ribosomal protein S3 [Culex tarsalis]
Length = 165
Score = 72.7 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 7/120 (5%)
Query: 101 LSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGA 160
+ +V + AT A+S+ +L + RRA ++ M GA G +V+ SG+L G
Sbjct: 1 MYAEKVATRGLCATAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG- 59
Query: 161 ELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDSDST 214
+ +++ +++G + ++D T G GIKV + L ++
Sbjct: 60 QRAKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKVKIMLPWDPNGKIGPKKPL 119
>gi|70909549|emb|CAJ17196.1| ribosomal protein S3e [Mycetophagus quadripustulatus]
Length = 158
Score = 72.7 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 28/123 (22%), Positives = 51/123 (41%), Gaps = 8/123 (6%)
Query: 104 NEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELS 163
+V + A A+S+ +L + RRA ++ M GA G +V+ SG+L G + +
Sbjct: 5 EKVANRGLCAIAQAESLRFKLIGGLAVRRACYGVLRYIMECGAKGCEVVVSGKLRG-QRA 63
Query: 164 RTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHR 221
++ +++G + ++D T G GIKV + D T R
Sbjct: 64 KSMKFVDGLMIHSGDPCNDYVDTATRHVLLRQGVLGIKVKIM-----LPWDPTGKTGPKR 118
Query: 222 VVE 224
+
Sbjct: 119 PLP 121
>gi|302749011|gb|ADL63985.1| ribosomal protein S3 [Sarcobatus vermiculatus]
Length = 458
Score = 72.3 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 42/153 (27%), Positives = 77/153 (50%), Gaps = 5/153 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ + ++ + G+ + LI+ II+ + R +++K+R LSN TN+
Sbjct: 307 KVMKLIEKFIDLGGI-RELIKGIEMMIEIILKNRRIPYGYNSYLNEVKKMRSLLSNRTNT 365
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSAM---RFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + +R FR + V++ + G +G+++
Sbjct: 366 NTLIESVKIKSVYQSASPIAQDISFQPKNKRRSFRGIFSKIVKNIPLVIQKGIEGIRICC 425
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGT 186
SGRL GAE++RTEC G+ L IDY +
Sbjct: 426 SGRLEGAEIARTECGKYGKTSCNVLYQKIDYAS 458
>gi|118724957|gb|ABL11072.1| ribosomal protein S3 [Codium taylorii]
gi|118724960|gb|ABL11074.1| ribosomal protein S3 [Codium taylorii]
gi|118724963|gb|ABL11076.1| ribosomal protein S3 [Codium taylorii]
gi|118724966|gb|ABL11078.1| ribosomal protein S3 [Codium taylorii]
Length = 44
Score = 72.3 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+RTE EG+VPL TL A+IDY A+T YG GIK+++ +
Sbjct: 1 ARTEWVREGQVPLHTLSANIDYTFRTAKTIYGILGIKIWIFQK 43
>gi|302748605|gb|ADL63783.1| ribosomal protein S3 [Calceolaria integrifolia]
Length = 476
Score = 72.0 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 38/151 (25%), Positives = 70/151 (46%), Gaps = 6/151 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKG--TDIEKIRKKLSNMTNSE 98
+ ++ K + +I I + + G +++KIR LSN TN+
Sbjct: 325 KVIELIEKFIDLGRIGEFLKGIEMMIEIILRNRRIRYGYNSYFHEVKKIRSLLSNRTNTN 384
Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIAS 154
+ ++ +A+ IAQ I+ QL ++ FR ++ V++ M+ G G+++ S
Sbjct: 385 TLIESVKIKSVYQSASPIAQDISFQLRTKKRSFRSIFRKIVKNIPLVMKKGVGGIRICCS 444
Query: 155 GRLNGAELSRTECYLEGRVPLQTLRAHIDYG 185
GR GA+++RTEC G++ IDY
Sbjct: 445 GRSKGAKIARTECGKYGKISRNVFNQKIDYA 475
>gi|118724912|gb|ABL11042.1| ribosomal protein S3 [Codium papenfussii]
Length = 56
Score = 71.6 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 31/45 (68%)
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
+RTE EG+VPLQ+L A+IDY A+T YG GIK+++ ++
Sbjct: 1 ARTEWVREGQVPLQSLSANIDYCFRTAKTIYGILGIKIWICQKNV 45
>gi|118724834|gb|ABL10990.1| ribosomal protein S3 [Codium geppiorum]
Length = 44
Score = 71.6 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 31/43 (72%)
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+RTE EG+VPLQTL A+IDY + A+T YG GIK+++ +
Sbjct: 1 ARTEWVREGQVPLQTLAANIDYTFSTAKTIYGILGIKIWIFQK 43
>gi|118724723|gb|ABL10916.1| ribosomal protein S3 [Codium bursa]
gi|118724726|gb|ABL10918.1| ribosomal protein S3 [Codium bursa]
Length = 44
Score = 71.6 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+RTE EG+VPLQ L A+IDY A+T YG GIK+++ +
Sbjct: 1 ARTEWVREGQVPLQNLSANIDYAFRTAKTIYGILGIKIWIFQK 43
>gi|291238325|ref|XP_002739080.1| PREDICTED: ribosomal protein S3-like [Saccoglossus kowalevskii]
Length = 250
Score = 71.6 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 25/120 (20%), Positives = 50/120 (41%), Gaps = 7/120 (5%)
Query: 101 LSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGA 160
L +V + A +S+ +L + RRA ++ M GA G +V+ SG+L G
Sbjct: 71 LYAEKVAARGLCAIAQCESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG- 129
Query: 161 ELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDSDST 214
+ +++ +++G + + ++D G GIKV + L ++
Sbjct: 130 QRAKSMKFVDGLMIHSGNPVNDYVDTAVRHVMLRQGVLGIKVKIMLPWDPTGKIGPKKPL 189
>gi|118724909|gb|ABL11040.1| ribosomal protein S3 [Codium ovale]
gi|118724924|gb|ABL11050.1| ribosomal protein S3 [Codium repens]
gi|118724927|gb|ABL11052.1| ribosomal protein S3 [Codium repens]
gi|118724954|gb|ABL11070.1| ribosomal protein S3 [Codium subtubulosum]
gi|118724984|gb|ABL11090.1| ribosomal protein S3 [Codium sp. DML30930]
gi|118724993|gb|ABL11096.1| ribosomal protein S3 [Codium sp. DML30929]
Length = 44
Score = 71.6 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+RTE EG+VPL TL A+IDY A+T YG GIK+++ +
Sbjct: 1 ARTEWVREGQVPLHTLAANIDYTFRTAKTIYGILGIKIWIFQK 43
>gi|1086195|pir||S51054 ribosomal protein S3 - Thermus aquaticus (fragments)
Length = 36
Score = 71.6 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 19/35 (54%), Positives = 23/35 (65%)
Query: 2 GQKINPILFRLGVNCTWNSRWFARGSEYGALLHED 36
G KI+PI FRLG+ W SRW+A +Y LL ED
Sbjct: 1 GNKIHPIGFRLGITRDWESRWYAGKKQYXHLLLED 35
>gi|118724918|gb|ABL11046.1| ribosomal protein S3 [Codium platylobium]
gi|118724999|gb|ABL11100.1| ribosomal protein S3 [Codium sp. HV1061]
gi|118725002|gb|ABL11102.1| ribosomal protein S3 [Codium sp. HV1068]
Length = 44
Score = 71.6 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 30/43 (69%)
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+RTE EG+VPLQTL A+IDY A+T YG GIK+++ +
Sbjct: 1 ARTEWVREGQVPLQTLSANIDYTFRTAKTIYGILGIKIWIFQK 43
>gi|288191269|gb|ADC43987.1| ribosomal protein S3 [Sloanea berteroana]
Length = 489
Score = 71.2 bits (173), Expect = 9e-11, Method: Composition-based stats.
Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 5/154 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 337 KVMELIEKFINLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNA 395
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQ---SAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ +L + FR + V+ M+ G +G+++
Sbjct: 396 NTLIESVKIKSVYQSASPIAQDISLKLRNKTRSFRSIFSKIVKYIPLVMKKGVEGIRICC 455
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTA 187
SGR GAE++RT+C G+ P IDY A
Sbjct: 456 SGRSKGAEIARTQCGKYGKTPRNVFNQKIDYAPA 489
>gi|118724996|gb|ABL11098.1| ribosomal protein S3 [Codium sp. DML66031]
Length = 56
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
+RTE +GRVPLQ+L A+IDY A+T YG GIK+++ +
Sbjct: 1 ARTEWVRKGRVPLQSLSANIDYCCRTAKTIYGILGIKIWIFQPNV 45
>gi|223927296|gb|ACN23261.1| ribosomal protein S3 [Halimeda heteromorpha]
Length = 218
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/179 (23%), Positives = 78/179 (43%), Gaps = 23/179 (12%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTH-KNCRIIVYSARPGLI 76
S+W+A Y L ED +R L +AG I I R + I++ + +P ++
Sbjct: 1 HLSQWYASKKYYSKYLLEDHFLRTILPKKYAKAGFENIKISRKIENHIEIVIRAQKPEIL 60
Query: 77 IGKKGTDIEKIRKKLSNMTNS--EIHLSVNEVPKPEINATL-----------IAQSIAQQ 123
IGKKG +++ +K++ + ++ S N KP++ L IA + +
Sbjct: 61 IGKKGENLKNFQKEIKKLIFKYRGLNQSRNAQSKPKLRVILHVIRCQTGASSIADFLVEN 120
Query: 124 LERRVVFRRAM---KRAV------QSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV 173
LE+R+ ++ K+ + + A+R A + + +S L + S E G V
Sbjct: 121 LEKRIPYKIVFVLLKKHLKKIRQRERALRSSAVSISIDSSPGLGASGGSVFEQDRTGSV 179
>gi|224999234|gb|ACN78389.1| ribosomal protein S3 [Codium fragile]
Length = 46
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 31/45 (68%)
Query: 161 ELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+++RTE +G+VPLQ+L A+IDY A+T YG GIK+++
Sbjct: 1 DIARTEWIRKGQVPLQSLAANIDYCCRTAKTIYGILGIKIWIFQP 45
>gi|255710087|gb|ACU30863.1| 40S ribosomal protein S3 [Ochlerotatus triseriatus]
Length = 157
Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 7/118 (5%)
Query: 103 VNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAEL 162
+V + A A+S+ +L + RRA ++ M GA G +V+ SG+L G +
Sbjct: 1 AEKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG-QR 59
Query: 163 SRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDSDST 214
+++ +++G + ++D T G GIKV + L ++
Sbjct: 60 AKSMKFVDGLMIHSGDPCNEYVDTATRHVLLRQGVLGIKVKIMLPWDPNGKIGPKKPL 117
>gi|224044177|ref|XP_002189345.1| PREDICTED: putative ribosomal protein S3, partial [Taeniopygia
guttata]
Length = 152
Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/110 (21%), Positives = 48/110 (43%), Gaps = 7/110 (6%)
Query: 111 INATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLE 170
+ A A+S+ +L + RRA ++ M GA G +V+ SG+L G + +++ +++
Sbjct: 5 LCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG-QRAKSMKFVD 63
Query: 171 GRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDSDST 214
G + + ++D G GIKV + L ++
Sbjct: 64 GLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIMLPWDPSGKIGPKKPL 113
>gi|302748717|gb|ADL63839.1| ribosomal protein S3 [Drosophyllum lusitanicum]
Length = 459
Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/158 (23%), Positives = 68/158 (43%), Gaps = 9/158 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ + ++ + + +I I + + G +++K+R LSN T
Sbjct: 304 KVMKLIEKFID---LGRIRELIKGIEMMIEIILKNRIIPYGYNSYLNEVKKMRSLLSNRT 360
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSAMRFGAD---GVKV 151
N+ + ++ +A+ IAQ I+ Q + + FR + V+ G+++
Sbjct: 361 NTNTLIESVKIQSVYQSASPIAQDISFQPKNKTRSFRSIFSKIVKDIPLVMKKEVEGIRI 420
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189
SGRL GAE++RTEC G+ IDY +A
Sbjct: 421 CCSGRLKGAEIARTECGKYGKTSRNVFNQKIDYASAEV 458
>gi|118724915|gb|ABL11044.1| ribosomal protein S3 [Codium platyclados]
Length = 44
Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 30/43 (69%)
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+RTE EG+VPLQTL A+IDY A+T YG GIK+++ +
Sbjct: 1 ARTEWVREGQVPLQTLSANIDYTCRTAKTIYGILGIKIWIFQK 43
>gi|118724762|gb|ABL10942.1| ribosomal protein S3 [Codium decorticatum]
Length = 56
Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
+RTE +G+VPLQ+L A+IDY A+T YG GIK+++ +
Sbjct: 1 ARTEWVRKGQVPLQSLSANIDYCCRTAKTIYGILGIKIWIFQPNV 45
>gi|118724816|gb|ABL10978.1| ribosomal protein S3 [Codium galeatum]
Length = 43
Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+RTE +G+VPLQ+L A+IDY A+T YG GIK+++
Sbjct: 1 ARTEWVRKGQVPLQSLSANIDYCCRTAKTIYGILGIKIWIFQP 43
>gi|302748915|gb|ADL63937.1| ribosomal protein S3 [Olinia emarginata]
Length = 478
Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 73/156 (46%), Gaps = 5/156 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + + +++K+R LSN T +
Sbjct: 323 KVMELIEKFIDLGGIVEL-IKGIEMMIEIILRNRKIPDGYNFYLNEVQKMRSLLSNRTKT 381
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153
++ ++ +A+ IAQ I+ Q + FR + + + M+ G +G+++
Sbjct: 382 NTNIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSILSQIVKDIPLVMKKGVEGIRICC 441
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189
SGR GAE++RT+C G+ IDY A
Sbjct: 442 SGRSEGAEIARTKCGKYGKTSRNVFNQKIDYAPAEV 477
>gi|123444699|ref|XP_001311117.1| ribosomal protein S3 [Trichomonas vaginalis G3]
gi|123456864|ref|XP_001316164.1| ribosomal protein S3 [Trichomonas vaginalis G3]
gi|123476890|ref|XP_001321615.1| ribosomal protein S3 [Trichomonas vaginalis G3]
gi|123483338|ref|XP_001324008.1| ribosomal protein S3 [Trichomonas vaginalis G3]
gi|154413076|ref|XP_001579569.1| ribosomal protein S3 [Trichomonas vaginalis G3]
gi|154415577|ref|XP_001580813.1| ribosomal protein S3 [Trichomonas vaginalis G3]
gi|121892915|gb|EAX98187.1| ribosomal protein S3, putative [Trichomonas vaginalis G3]
gi|121898863|gb|EAY03941.1| ribosomal protein S3, putative [Trichomonas vaginalis G3]
gi|121904445|gb|EAY09392.1| ribosomal protein S3, putative [Trichomonas vaginalis G3]
gi|121906883|gb|EAY11785.1| ribosomal protein S3, putative [Trichomonas vaginalis G3]
gi|121913777|gb|EAY18583.1| ribosomal protein S3, putative [Trichomonas vaginalis G3]
gi|121915034|gb|EAY19827.1| ribosomal protein S3, putative [Trichomonas vaginalis G3]
Length = 216
Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/169 (20%), Positives = 69/169 (40%), Gaps = 6/169 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMT---NS 97
E L L + G + +T II+ +A + G ++++R +
Sbjct: 24 ELLTRELTKEGYGGCEVRQTPTRTEIIIKAANTKEFVDNHGRRLQEVRMMIQKRWRLKED 83
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ + ++ + + ++A +S+ +L R+ RRA ++ M GA G +V SG+L
Sbjct: 84 SLEIFIDRIQRKGLSALNQLESLRYKLIARIPARRAAYSIIRFVMDAGARGCEVAISGKL 143
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
GA + T Y EG + + + + GI+V + L
Sbjct: 144 RGA-RASTSKYKEGYMVKSGDVTKQFVTQAVGHIPMKQATIGIRVLIML 191
>gi|118724828|gb|ABL10986.1| ribosomal protein S3 [Codium geppiorum]
gi|118724858|gb|ABL11006.1| ribosomal protein S3 [Codium isthmocladum]
gi|118724864|gb|ABL11010.1| ribosomal protein S3 [Codium isthmocladum]
gi|118724867|gb|ABL11012.1| ribosomal protein S3 [Codium isthmocladum subsp. clavatum]
gi|118724870|gb|ABL11014.1| ribosomal protein S3 [Codium laminarioides]
gi|118724921|gb|ABL11048.1| ribosomal protein S3 [Codium prostratum]
gi|118724936|gb|ABL11058.1| ribosomal protein S3 [Codium spinescens]
gi|118724972|gb|ABL11082.1| ribosomal protein S3 [Codium vermilara]
gi|118724975|gb|ABL11084.1| ribosomal protein S3 [Codium vermilara]
gi|118724990|gb|ABL11094.1| ribosomal protein S3 [Codium sp. DML65827]
gi|118725011|gb|ABL11108.1| ribosomal protein S3 [Codium sp. DHO-007]
gi|118725014|gb|ABL11110.1| ribosomal protein S3 [Codium sp. DHO2-196]
Length = 44
Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 30/43 (69%)
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+RTE EG+VPLQTL A+IDY A+T YG GIK+++ +
Sbjct: 1 ARTEWVREGQVPLQTLAANIDYTFRTAKTIYGILGIKIWIFQK 43
>gi|154284746|ref|XP_001543168.1| hypothetical protein HCAG_00214 [Ajellomyces capsulatus NAm1]
gi|150406809|gb|EDN02350.1| hypothetical protein HCAG_00214 [Ajellomyces capsulatus NAm1]
Length = 239
Score = 70.4 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/152 (21%), Positives = 64/152 (42%), Gaps = 11/152 (7%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E+ Q L + G + + + T II+ + ++G++G
Sbjct: 16 ADGVFYAEL-------NEFFQRELAEEGYSGVEVRVTPTVTDIIIRATHTQEVLGEQGRR 68
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ +K + + L +V ++A +S+ +L + RRA ++
Sbjct: 69 IRELTSLIQKRFKFPENSVSLYAAKVQNRGLSAVAQCESLRYKLLNGLAVRRACYGVLRF 128
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGR 172
M GA G +V+ SG+L A +++ +
Sbjct: 129 IMESGAKGCEVVVSGKLRAA-RAKSMKFTSKS 159
>gi|322816232|gb|EFZ24615.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
Length = 139
Score = 70.4 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 58/137 (42%), Gaps = 3/137 (2%)
Query: 92 SNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKV 151
+ ++ L V ++A A+S+ +L + RRA ++ M GA G +V
Sbjct: 1 FHYKEGKLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIRHVMESGAKGCEV 60
Query: 152 IASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVS 209
G++ G + +++ + +G + + +D T G+ G+KV + L +
Sbjct: 61 TVGGKIKG-QRAKSMTFRDGYMIKSGTAHKNFVDVATRHCHLRAGTLGVKVKIMLPKSMQ 119
Query: 210 DSDSTIPAAEHRVVEKD 226
+ + +P + K+
Sbjct: 120 NEEEILPDVITVLEPKE 136
>gi|294939314|ref|XP_002782408.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239894014|gb|EER14203.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 244
Score = 70.4 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 67/169 (39%), Gaps = 17/169 (10%)
Query: 67 IVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQ 123
++ ++G+KG I ++ ++ + + + L V + A A+S+ +
Sbjct: 39 NLHDYGIRKVLGEKGRRIRELTALVERRFDFPENSVELFAERVDNRALCAQAQAESLRYK 98
Query: 124 LERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAH-- 181
L + RRA ++ M GA GV+V SG+L A+ ++ + +G + L T
Sbjct: 99 LLGGLPVRRAAYGVLRFVMENGAKGVEVTVSGKLR-AQRAKVMKFADGYL-LSTGTPKEM 156
Query: 182 -IDYGTAVAETAYGSCGIKVYVSL---------RDEVSDSDSTIPAAEH 220
+D + G GI+V + + D TI +
Sbjct: 157 YVDQAIRNVDMRQGILGIRVKIMMAYDPEGKSGPKTRLPDDITIHEPKE 205
>gi|118724813|gb|ABL10976.1| ribosomal protein S3 [Codium cf. fragile AU5]
Length = 44
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 30/43 (69%)
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+RTE EG+VPLQTL A+IDY A+T YG GIK+++ +
Sbjct: 1 ARTEWVREGQVPLQTLAANIDYTCRTAKTIYGILGIKIWIFQK 43
>gi|322820571|gb|EFZ27150.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
Length = 130
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 55/128 (42%), Gaps = 3/128 (2%)
Query: 101 LSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGA 160
L V ++A A+S+ +L + RRA ++ M GA G +V G++ G
Sbjct: 1 LFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIRHVMESGAKGCEVTVGGKIKG- 59
Query: 161 ELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAA 218
+ +++ + +G + + +D T G+ G+KV + L + + + +P
Sbjct: 60 QRAKSMTFRDGYMIKSGTAHKNFVDVATRHCHLRAGTLGVKVKIMLPKSMQNEEEILPDV 119
Query: 219 EHRVVEKD 226
+ K+
Sbjct: 120 ITVLEPKE 127
>gi|118724987|gb|ABL11092.1| ribosomal protein S3 [Codium sp. DML40218]
Length = 44
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 30/43 (69%)
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+RTE EG+VPLQTL A+IDY A+T YG GIK+++ +
Sbjct: 1 ARTEWVREGQVPLQTLSANIDYTFKTAKTIYGILGIKIWIFQK 43
>gi|38047525|gb|AAR09665.1| similar to Drosophila melanogaster RpS3 [Drosophila yakuba]
Length = 172
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 65/136 (47%), Gaps = 4/136 (2%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + + ++G+KG I ++ + N
Sbjct: 25 EFLTRELAEDGYSGVEVRATPSRTEIIIMATKTQQVLGEKGRRIRELTAMVQKRFNFETG 84
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
I L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 85 RIELYAEKVATRGLCAIAQAESLRYKLTGGLAVRRACYGVLRYIMESGAKGCEVVVSGKL 144
Query: 158 NGAELSRTECYLEGRV 173
G + +++ +++G +
Sbjct: 145 RG-QRAKSMKFVDGLM 159
>gi|312232833|gb|ADQ53745.1| ribosomal protein S3 [Croton trinitatis]
Length = 452
Score = 70.0 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 83 DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA 141
+++K+R LSN TN+ +L ++ +A+ IAQ I+ QL + FR + V+
Sbjct: 341 EMKKMRSLLSNRTNTNTYLESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSQIVKDI 400
Query: 142 ---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189
M+ G +G+++ SGRL GAE++RTEC G+ IDY A
Sbjct: 401 PLVMKKGVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFNQKIDYAPAEV 451
>gi|118724795|gb|ABL10964.1| ribosomal protein S3 [Codium fragile]
gi|118724798|gb|ABL10966.1| ribosomal protein S3 [Codium fragile]
gi|118724804|gb|ABL10970.1| ribosomal protein S3 [Codium fragile]
gi|224999241|gb|ACN78393.1| ribosomal protein S3 [Codium fragile]
gi|224999244|gb|ACN78395.1| ribosomal protein S3 [Codium fragile]
gi|224999247|gb|ACN78397.1| ribosomal protein S3 [Codium fragile]
gi|224999250|gb|ACN78399.1| ribosomal protein S3 [Codium fragile]
gi|224999255|gb|ACN78402.1| ribosomal protein S3 [Codium fragile]
gi|224999258|gb|ACN78404.1| ribosomal protein S3 [Codium fragile]
gi|224999261|gb|ACN78406.1| ribosomal protein S3 [Codium fragile]
gi|255529406|gb|ACU12644.1| ribosomal protein S3 [Codium fragile]
gi|255529412|gb|ACU12648.1| ribosomal protein S3 [Codium fragile]
Length = 44
Score = 69.6 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+RTE +G+VPLQ+L A+IDY A+T YG GIK+++
Sbjct: 1 ARTEWIRKGQVPLQSLAANIDYCCRTAKTIYGILGIKIWIFQP 43
>gi|118725017|gb|ABL11112.1| ribosomal protein S3 [Codium sp. DML65829]
Length = 44
Score = 69.6 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+RTE +G+VPLQTL A+IDY A+T YG GIK+++ +
Sbjct: 1 ARTEWVRQGQVPLQTLAANIDYTFRTAKTIYGILGIKIWIFHK 43
>gi|224999238|gb|ACN78391.1| ribosomal protein S3 [Codium fragile]
gi|255529403|gb|ACU12642.1| ribosomal protein S3 [Codium fragile]
Length = 45
Score = 69.6 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 30/44 (68%)
Query: 162 LSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
++RTE +G+VPLQ+L A+IDY A+T YG GIK+++
Sbjct: 1 IARTEWIRKGQVPLQSLAANIDYCCRTAKTIYGILGIKIWIFQP 44
>gi|118724969|gb|ABL11080.1| ribosomal protein S3 [Codium cf. tenue HV608]
Length = 44
Score = 69.6 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 30/43 (69%)
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+RTE EG+VPLQTL A+IDY A+T YG GIK+++ +
Sbjct: 1 ARTEWVREGQVPLQTLAANIDYTFRTAKTIYGILGIKIWIFQK 43
>gi|118724792|gb|ABL10962.1| ribosomal protein S3 [Codium cf. flabellatum DHO-009]
gi|118724822|gb|ABL10982.1| ribosomal protein S3 [Codium geppiorum]
gi|118724879|gb|ABL11020.1| ribosomal protein S3 [Codium cf. latum ASH-018]
Length = 44
Score = 69.3 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 31/43 (72%)
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+RTE EG+VPLQTL A+IDY +A+T YG GIK+++ +
Sbjct: 1 ARTEWVREGQVPLQTLSANIDYTFRIAKTIYGILGIKIWIFQK 43
>gi|118724780|gb|ABL10954.1| ribosomal protein S3 [Codium duthieae]
Length = 53
Score = 69.3 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
+RTE +G+VPLQ+L A+IDY A+T YG GIK+++
Sbjct: 1 ARTEWLRKGQVPLQSLSANIDYCCRTAKTIYGILGIKIWIF 41
>gi|118724837|gb|ABL10992.1| ribosomal protein S3 [Codium gracile]
Length = 44
Score = 69.3 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+RTE EG+VPLQ+L A+IDY A+T YG GIK+++ +
Sbjct: 1 ARTEWVREGQVPLQSLAANIDYTFRTAKTIYGILGIKIWIFQK 43
>gi|288191255|gb|ADC43980.1| ribosomal protein S3 [Fusispermum laxiflorum]
Length = 157
Score = 69.3 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 39/158 (24%), Positives = 71/158 (44%), Gaps = 9/158 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ L + ++ I + + G +++K+R LSN T
Sbjct: 2 KVMELIEKFLNLGRIGEL---IKGIEMMIEIILRNRIIPYGYNSYLNEMKKMRSLLSNKT 58
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRA---VQSAMRFGADGVKV 151
N+ + ++ +A+LIAQ I+ QL ++ FR + + M+ G +G+++
Sbjct: 59 NTNTLIESVKIQSVYQSASLIAQDISFQLRNKKRSFRSIFSKIEKDIPLVMKKGVEGIRI 118
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189
SGR GAE++RT+C G+ IDY A
Sbjct: 119 CCSGRSKGAEIARTKCGKSGKPSRNVFNQKIDYAPAEV 156
>gi|118724900|gb|ABL11034.1| ribosomal protein S3 [Codium cf. minus DHO-015]
gi|118724903|gb|ABL11036.1| ribosomal protein S3 [Codium cf. minus DHO2-188]
Length = 44
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 31/43 (72%)
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+RTE EG+VPLQTL A+IDY +A+T YG GIK+++ +
Sbjct: 1 ARTEWIREGQVPLQTLSANIDYTFRIAKTIYGILGIKIWIFQK 43
>gi|118724777|gb|ABL10952.1| ribosomal protein S3 [Codium duthieae]
Length = 56
Score = 68.9 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
+RTE +G+VPLQ+L A+IDY A+T YG GIK+++
Sbjct: 1 ARTEWVRKGQVPLQSLSANIDYCCRTAKTIYGILGIKIWIF 41
>gi|302749059|gb|ADL64009.1| ribosomal protein S3 [Strasburgeria robusta]
Length = 453
Score = 68.9 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 9/152 (5%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ + I + + G +++K+R LSN T
Sbjct: 305 KVMELIEKFIDLGGIGEF---LKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRT 361
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKV 151
N+ + ++ +A+ IAQ I+ QL + FR + + + M+ G +G+++
Sbjct: 362 NTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSILSKIVKDIPLVMKKGVEGIRI 421
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHID 183
SGR GAE++RTEC G+ ID
Sbjct: 422 CCSGRSEGAEIARTECGKYGKTSRNVFNQKID 453
>gi|118724981|gb|ABL11088.1| ribosomal protein S3 [Codium sp. DML40227]
Length = 44
Score = 68.9 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+RTE +G+VPLQTL A+IDY A+T YG GIK+++ +
Sbjct: 1 ARTEWIRQGQVPLQTLAANIDYTFRTAKTIYGILGIKIWIFQK 43
>gi|118724774|gb|ABL10950.1| ribosomal protein S3 [Codium duthieae]
Length = 56
Score = 68.9 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 29/41 (70%)
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
+RTE +G+VPLQ+L A+IDY A+T YG GIK+++
Sbjct: 1 ARTEWVRKGQVPLQSLSANIDYCCRTAKTIYGILGIKIWIF 41
>gi|118724906|gb|ABL11038.1| ribosomal protein S3 [Codium muelleri]
Length = 44
Score = 68.5 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 31/43 (72%)
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+RTE EG+VPLQTL A+IDY +A+T YG GIK+++ +
Sbjct: 1 ARTEWVREGQVPLQTLAANIDYTFRIAKTIYGILGIKIWIFQK 43
>gi|289065184|ref|YP_003434236.1| ribosomal protein S3 [Chattonella marina]
gi|288871896|dbj|BAI70583.1| ribosomal protein S3 [Chattonella marina]
Length = 315
Score = 68.5 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Query: 106 VPKPEINATLIAQSIAQQLERRVVFRR------AMKRAV--QSAMRFGADGVKVIASGRL 157
+ K + +A LI + LE++ + +R +++R + + G+K+ +GR+
Sbjct: 206 IKKQKPSALLIGNYVKYLLEKKGMKKRQRFVLNSLRRFLIQNQKILTNLKGLKIQVNGRI 265
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202
NG S T G VPLQT IDY T G GIKV+V
Sbjct: 266 NGRNRSTTYVIQLGCVPLQTFSKKIDYTFLPCFTLDGVFGIKVWV 310
Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGS 27
MGQK +P+ RLG+ W S WF
Sbjct: 1 MGQKAHPVGTRLGILSNWESEWFTTNK 27
>gi|13310850|gb|AAK18642.1|AF250389_8 ribosomal protein S3 [Candidatus Carsonella ruddii]
Length = 150
Score = 68.5 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG+KINPI FRLG ++S W+ + + L +D+ +RE ++ + I I
Sbjct: 1 MGKKINPIFFRLGKKTNYHSLWYCKKKNFSFFLKKDILLREIIKKFFFFIDLNNIDI-IF 59
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNE 105
I +Y I+ + ++ + ++ + I ++
Sbjct: 60 ANKIIINLYLNNFENILSIENY-LDLLILEIYKIFKKNILFNLIN 103
>gi|297815302|ref|XP_002875534.1| hypothetical protein ARALYDRAFT_905288 [Arabidopsis lyrata subsp.
lyrata]
gi|297321372|gb|EFH51793.1| hypothetical protein ARALYDRAFT_905288 [Arabidopsis lyrata subsp.
lyrata]
Length = 79
Score = 68.5 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 24/79 (30%), Positives = 49/79 (62%)
Query: 86 KIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFG 145
+K N N ++++++ + P + ++A+ IA QL+ RV FR+AMK+A++ +
Sbjct: 1 MNVQKELNCVNRKLNIAITRISNPYGDPNILAEFIAGQLKDRVSFRKAMKKAIELTEQAN 60
Query: 146 ADGVKVIASGRLNGAELSR 164
G++V +GR++G E++R
Sbjct: 61 TKGIQVQIAGRIDGKEIAR 79
>gi|255529400|gb|ACU12640.1| ribosomal protein S3 [Codium fragile]
Length = 42
Score = 68.1 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 165 TECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
TE +G+VPLQ+L A+IDY A+T YG GIK+++
Sbjct: 1 TEWIRKGQVPLQSLAANIDYCCRTAKTIYGILGIKIWIFQP 41
>gi|239786350|gb|ACS16410.1| ribosomal protein S3 [Chlamydomonas reinhardtii]
gi|239786352|gb|ACS16411.1| ribosomal protein S3 [Chlamydomonas reinhardtii]
gi|239786354|gb|ACS16412.1| ribosomal protein S3 [Chlamydomonas reinhardtii]
gi|239786356|gb|ACS16413.1| ribosomal protein S3 [Chlamydomonas reinhardtii]
gi|239786358|gb|ACS16414.1| ribosomal protein S3 [Chlamydomonas reinhardtii]
gi|239786360|gb|ACS16415.1| ribosomal protein S3 [Chlamydomonas reinhardtii]
gi|239786362|gb|ACS16416.1| ribosomal protein S3 [Chlamydomonas reinhardtii]
Length = 41
Score = 68.1 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 20/37 (54%), Positives = 24/37 (64%)
Query: 169 LEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
GRVPLQTLRA+IDY A T YG G+KV++
Sbjct: 1 RAGRVPLQTLRANIDYAYRTANTIYGIIGVKVWIFKG 37
>gi|255529382|gb|ACU12628.1| ribosomal protein S3 [Codium fragile]
gi|255529388|gb|ACU12632.1| ribosomal protein S3 [Codium fragile]
gi|255529420|gb|ACU12653.1| ribosomal protein S3 [Codium fragile]
Length = 43
Score = 68.1 bits (165), Expect = 8e-10, Method: Composition-based stats.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 164 RTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
RTE +G+VPLQ+L A+IDY A+T YG GIK+++
Sbjct: 1 RTEWIRKGQVPLQSLAANIDYCCRTAKTIYGILGIKIWIFQP 42
>gi|294897613|ref|XP_002776024.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239882489|gb|EER07840.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 193
Score = 67.7 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 36/153 (23%), Positives = 67/153 (43%), Gaps = 11/153 (7%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E L L + G + + + T II+ + R ++G+KG
Sbjct: 18 ADGVFYAEL-------NELLTTILAEDGYSGVEVRVTPIKTEIIIRATRTREVLGEKGRR 70
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ ++ + + + L V + A A+S+ +L + RRA ++
Sbjct: 71 IRELTALVERRFDFPENSVELFAERVDNRALCAQAQAESLRYKLLGGLPVRRAAYGVLRF 130
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV 173
M GA GV+V SG+L A+ ++ + +G +
Sbjct: 131 VMENGAKGVEVTVSGKLR-AQRAKVMKFADGYL 162
>gi|118724765|gb|ABL10944.1| ribosomal protein S3 [Codium dimorphum]
Length = 44
Score = 67.7 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 31/43 (72%)
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+RTE EG+VPLQ+L A+IDY +A+T YG GIK+++ +
Sbjct: 1 ARTEWVREGQVPLQSLAANIDYSFQIAKTIYGILGIKIWIFQK 43
>gi|118724783|gb|ABL10956.1| ribosomal protein S3 [Codium effusum]
gi|118724786|gb|ABL10958.1| ribosomal protein S3 [Codium effusum]
gi|118724789|gb|ABL10960.1| ribosomal protein S3 [Codium effusum]
Length = 44
Score = 67.7 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 22/42 (52%), Positives = 31/42 (73%)
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
+RTE EG+VPLQTL A+IDY + +A+T YG GIK+++
Sbjct: 1 ARTEWVQEGQVPLQTLAANIDYTSQIAKTIYGILGIKIWIFH 42
>gi|118724825|gb|ABL10984.1| ribosomal protein S3 [Codium geppiorum]
Length = 44
Score = 67.7 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+RTE +G+VPLQTL A+IDY A+T YG GIK+++
Sbjct: 1 ARTEWVRKGQVPLQTLAANIDYTFRTAKTIYGILGIKIWIFQN 43
>gi|149068845|gb|EDM18397.1| rCG40478, isoform CRA_g [Rattus norvegicus]
Length = 177
Score = 67.7 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/127 (23%), Positives = 56/127 (44%), Gaps = 3/127 (2%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NGAELSR 164
G +
Sbjct: 143 RGQRANH 149
>gi|11496539|ref|NP_044549.1| ribosomal protein S3 [Toxoplasma gondii RH]
gi|5231242|gb|AAD41136.1|U87145_5 ribosomal protein S3 [Toxoplasma gondii]
Length = 224
Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 63/145 (43%), Gaps = 9/145 (6%)
Query: 63 NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQ 122
+I + I KK ++ +++K I+++ + P + T + + +
Sbjct: 85 KLKIFIKEINNIKRIYKKIDNLNNLKQKYY------IYINFLILKNPFSSITYLFYYVIK 138
Query: 123 QLERRVVFRRAMKRA---VQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
+ ++ + R+ +K+ + + + G+K++ SG++NG +++ E G
Sbjct: 139 KFKQTLSLRKILKQLSLLILNIKKTSIKGIKILVSGKINGVVIAKKETCNYGLNYFNKYV 198
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSL 204
+I Y +T +G G K ++ L
Sbjct: 199 YNIKYNVFYLKTKFGVLGFKFWIFL 223
>gi|118725008|gb|ABL11106.1| ribosomal protein S3 [Codium sp. DHO2-348]
Length = 44
Score = 67.3 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 30/43 (69%)
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+RTE EG+VPLQTL A+IDY A+T YG GIK+++ +
Sbjct: 1 ARTERVREGQVPLQTLAANIDYTFRTAKTIYGILGIKIWIFQK 43
>gi|49147206|ref|YP_025799.1| ribosomal protein S3 [Pseudendoclonium akinetum]
gi|33439221|gb|AAQ18758.1| ribosomal protein S3 [Pseudendoclonium akinetum]
Length = 525
Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 141 AMRFGADGVKVIASGRLNGAE-LSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIK 199
+ + G+++ SGRL G + +++T GRVPL TLR +D+ V +T GS G+K
Sbjct: 460 VIPYLIKGLRITFSGRLGGKKGMAKTLTKTTGRVPLSTLREKVDFAKGVVQTKMGSLGVK 519
Query: 200 VYVSLR 205
V++
Sbjct: 520 VWICFN 525
>gi|288191170|gb|ADC43938.1| ribosomal protein S3 [Euphronia guianensis]
Length = 211
Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRA---MKRA 137
++K+R LSN TN+ + ++ +A+ IAQ I+ QL +R FR +++
Sbjct: 99 NKMKKMRSLLSNRTNTNTLIESVKIQSVYQSASPIAQDISFQLRNKRRSFRSIYSQIRKD 158
Query: 138 VQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189
+ M+ G +G+++ SGR GAE++RT C G+ +DY A
Sbjct: 159 IPLVMKKGVEGIRICCSGRSEGAEIARTLCGKYGKTSRNVFNQKMDYAPAEV 210
>gi|294886505|ref|XP_002771736.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239875488|gb|EER03552.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 184
Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/153 (23%), Positives = 67/153 (43%), Gaps = 11/153 (7%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E L L + G + + + T II+ + R ++G+KG
Sbjct: 18 ADGVFYAEL-------NELLTTILAEDGYSGVEVRVTPIKTEIIIRATRTREVLGEKGRR 70
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQS 140
I ++ ++ + + + L V + A A+S+ +L + RRA ++
Sbjct: 71 IRELTALVERRFDFPENSVELFAERVDNRALCAQAQAESLRYKLLGGLPVRRAAYGVLRF 130
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV 173
M GA GV+V SG+L A+ ++ + +G +
Sbjct: 131 VMENGAKGVEVTVSGKLR-AQRAKVMKFADGYL 162
>gi|148684444|gb|EDL16391.1| ribosomal protein S3, isoform CRA_f [Mus musculus]
Length = 168
Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NG 159
G
Sbjct: 143 RG 144
>gi|13310859|gb|AAK18650.1|AF250390_8 ribosomal protein S3 [Candidatus Carsonella ruddii]
Length = 148
Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/154 (24%), Positives = 71/154 (46%), Gaps = 6/154 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
MG+KINP+LFRL N ++S W+ +Y L D+ IRE ++ + ++ I I +
Sbjct: 1 MGKKINPVLFRLKKNSVYHSLWYNIKKKYFYYLKCDILIREIIRKNFLFINLSYIDIIIS 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
I +Y L+ + ++ ++S + I L+ V +NA IA ++
Sbjct: 61 -NKLIINLYINNVDLLNDIENY-LDIFIFQISKILKKNIILNF--VFNYVLNAKNIAINV 116
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVIAS 154
Q+ + ++ +K+ + + G K+ S
Sbjct: 117 VNQILNKNSIKKIIKKEIFN--NRKNLGCKIQIS 148
>gi|118724753|gb|ABL10936.1| ribosomal protein S3 [Codium cranwelliae]
Length = 44
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+RTE +G+VPLQ+L A+IDY A+T YG GIK+++ +
Sbjct: 1 ARTEWVRKGQVPLQSLEANIDYSFQTAKTIYGILGIKIWIFQK 43
>gi|118724945|gb|ABL11064.1| ribosomal protein S3 [Codium spongiosum]
Length = 44
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 31/43 (72%)
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+RTE EG+VPLQ+L A+IDY +A+T YG GIK+++ +
Sbjct: 1 ARTEWVQEGQVPLQSLTANIDYTFQIAKTIYGILGIKIWIFQK 43
>gi|8954386|ref|NP_059375.1| 30S ribosomal protein S3 [Cyanidioschyzon merolae]
gi|4115799|dbj|BAA36537.1| 30S ribosomal protein S3 [Cyanidioschyzon merolae strain 10D]
Length = 282
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/152 (15%), Positives = 51/152 (33%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
M KI P +RLG W + W+ Y L ++LKI EYL L + + +
Sbjct: 1 MSHKIRPENYRLGYLFDWKNDWYTHNINYSNFLIKNLKISEYLNRILYKNFLFLGDLTLK 60
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSI 120
++++ K T+ + I + ++ + I +
Sbjct: 61 SNALKVLISLTCYPCKDSYKNTNWDLINHLCQLYFQKSVQINYYYRHTLLEHPNFITNWL 120
Query: 121 AQQLERRVVFRRAMKRAVQSAMRFGADGVKVI 152
LE+ + + + + + ++
Sbjct: 121 CFLLEKEYDLKIILNQVKNFIKKTQENEYQIN 152
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/154 (20%), Positives = 50/154 (32%), Gaps = 10/154 (6%)
Query: 62 KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS-- 119
I+ + I K + N E + E + N + + +
Sbjct: 129 DLKIILNQVKNFIKKTQENEYQINKKTQNFIRSKNFETTKKLIETKNFQANTSYRSSNSL 188
Query: 120 ---IAQQLERRVVFRRAMKRAVQSAMRFGA---DGVKVIASGRLNG--AELSRTECYLEG 171
+ + + G+K+I GRL+G ++S E G
Sbjct: 189 HSSTRSETYSGNYYCSHCINSYDRFFSTKIVLLRGLKIIIRGRLHGLQNQISTVESIEIG 248
Query: 172 RVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
VPLQT I Y T T YG GI+V++
Sbjct: 249 TVPLQTKEHEILYSTRDFVTKYGVYGIQVWIFYN 282
>gi|226482852|emb|CAX79393.1| ribosomal protein S3 [Schistosoma japonicum]
gi|226482854|emb|CAX79394.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 138
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 51/116 (43%), Gaps = 8/116 (6%)
Query: 111 INATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLE 170
++A A+S+ +L + R+A ++ M GA G +VI SG++ G + ++ + +
Sbjct: 6 LSAIAQAESLRYKLTYGLPVRKACYGILRFIMESGARGAEVIVSGKIKG-QRAKAMKFCD 64
Query: 171 GRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
G + + ++D + G GIKV + D DS+ + +
Sbjct: 65 GLMIHSGDPVNYYVDKAVRHVQLPQGILGIKVKIM-----MDHDSSGKKGPRKPLP 115
>gi|118724888|gb|ABL11026.1| ribosomal protein S3 [Codium lucasii subsp. capense]
Length = 44
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 32/43 (74%)
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+RTE EG+VPLQTL A+IDY + +A+T YG GIK+++ +
Sbjct: 1 ARTEWVQEGQVPLQTLAANIDYTSQIAKTIYGILGIKIWIFQK 43
>gi|118724882|gb|ABL11022.1| ribosomal protein S3 [Codium lucasii]
Length = 44
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 31/43 (72%)
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+RTE EG+VPLQ+L A+IDY +A+T YG GIK+++ +
Sbjct: 1 ARTEWVQEGQVPLQSLSANIDYTFQIAKTIYGILGIKIWIFQK 43
>gi|118724732|gb|ABL10922.1| ribosomal protein S3 [Codium capitatum]
Length = 44
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 31/43 (72%)
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+RTE +G+VPLQTL A+IDY +A+T YG GIK+++ +
Sbjct: 1 ARTEWLRKGKVPLQTLSANIDYTFRIAKTIYGILGIKIWIFQK 43
>gi|290559289|gb|EFD92626.1| KH type 2 domain protein [Candidatus Parvarchaeum acidophilus
ARMAN-5]
Length = 223
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 48/205 (23%), Positives = 85/205 (41%), Gaps = 12/205 (5%)
Query: 25 RGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDI 84
++E+ REYL + G++ I IE+T +II+ + +PG II + +
Sbjct: 3 SKKIITDKVNEESA-REYLFKKFNRFGISDIKIEKTPLGMKIIIKTPKPGAIITRANQIL 61
Query: 85 EKIRKKLSNMTNSEIHLSVNEVP-KPEINATLIAQSIAQQLERR--VVFRRAMKRAVQSA 141
+ K L E E P ++ +IA SIA ++ + + ++ + +A+ S
Sbjct: 62 RESSKDLGEFFKQESPRIEVENSLDPNLDPAIIADSIAFKIAKFGPMKYKVVIHKAMDSI 121
Query: 142 MRFGADGVKVIASGRLNGAELSRTECYL-EGRVPLQTLRAHIDYGTAVAE----TAYGSC 196
M GA GV++ G + E + + G V +T + +G A+ GS
Sbjct: 122 MAAGAKGVEIEIGGVIK--ERAAHFKFRPIGSVMPKTGQVEF-FGVRTAKKQLVLKRGSI 178
Query: 197 GIKVYVSLRDEVSDSDSTIPAAEHR 221
GIKV + + E E
Sbjct: 179 GIKVTIVVPTETVGGIKINGGRESE 203
>gi|116488040|gb|ABJ98602.1| 40S ribosomal protein S3 [Scophthalmus maximus]
Length = 147
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 3/122 (2%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 142
Query: 158 NG 159
G
Sbjct: 143 RG 144
>gi|223927799|gb|ACN23520.1| ribosomal protein S3 [Halimeda discoidea]
Length = 149
Score = 65.8 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 62/149 (41%), Gaps = 11/149 (7%)
Query: 18 WNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNC-RIIVYSARPGLI 76
S W+A +Y + ED + L +A I I R + I++++ +P ++
Sbjct: 1 HLSHWYASKKDYSKYVLEDNFVXTLLSKKXNRARFEXIQISRKIZXHXEIVIHAQKPDIL 60
Query: 77 IGKKGTDIEKIRKKLSNM--------TNSEIHLSVNEVPKPEINATLIAQSIAQQLERRV 128
IG+KG +E +K+J NS++ + + ++ IA I LE R+
Sbjct: 61 IGRKGEXLEIFQKQJXTFIFQYRQIEWNSKLXVILYIFRXKTSASSAIADFIVXHLEXRI 120
Query: 129 VFRRAM--KRAVQSAMRFGADGVKVIASG 155
++ + + G+K+ SG
Sbjct: 121 PYKVVFTLLQKHLKXKKXSTLGMKIQISG 149
>gi|288191227|gb|ADC43966.1| ribosomal protein S3 [Podostemum ceratophyllum]
Length = 390
Score = 65.8 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/153 (24%), Positives = 66/153 (43%), Gaps = 5/153 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIH 100
+Y+ K+ + + + I+K+R LSN TN+ I
Sbjct: 238 KYIFIDQFVFLGGKVEFIKKAIEMMKKIILKK-SYRYNLYLFSIKKMRSLLSNRTNTNIF 296
Query: 101 LSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIASGR 156
+ ++ +A+ IAQ I+ +L+ + FR + + + S M+ G G+++ SGR
Sbjct: 297 IFSVKMKSVFQSASTIAQDISLKLKNKNRSFRSIYTKIVKDISSVMKKGIGGIRICCSGR 356
Query: 157 LNGAELSRTECYLEGRVPLQTLRAHIDYGTAVA 189
G +++RTEC G+ IDY TA
Sbjct: 357 SKGKKIARTECGNYGKTSRNVFNQKIDYATAEV 389
>gi|147810849|emb|CAN71792.1| hypothetical protein VITISV_022106 [Vitis vinifera]
Length = 252
Score = 65.8 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/187 (18%), Positives = 67/187 (35%), Gaps = 25/187 (13%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIH 100
E L L + G + + + T II+ + R ++GKK + + +
Sbjct: 23 EVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGKKDQGADFQWFRRGLNFLKTVW 82
Query: 101 LSVNE----------VPKPEINATL-----------IAQSIAQQLERRVVFRRAMKRAVQ 139
+ + + + + I + + F A ++
Sbjct: 83 SFMLRKLTIGASVPLLRQSHCDTSFLEDLPFGGKPEIGHYYCH-IRSYLKFSLACYGVLR 141
Query: 140 SAMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCG 197
M GA G +VI SG+L A+ +++ + +G + Q ++ +ID G G
Sbjct: 142 FVMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQGVLG 200
Query: 198 IKVYVSL 204
IKV + L
Sbjct: 201 IKVKIML 207
>gi|313768542|ref|YP_004062216.1| ribosomal protein S3 [Plocamiocolax pulvinata]
gi|312844669|gb|ADR03232.1| ribosomal protein S3 [Plocamiocolax pulvinata]
Length = 235
Score = 65.8 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 40/231 (17%), Positives = 78/231 (33%), Gaps = 30/231 (12%)
Query: 1 MGQKINPILFRLGVNCTWNSRWF------ARGSEYGALLHE--DLKIREYLQCHLKQAGV 52
M +KINPI RLG+ WN F + Y +LH+ LK+ L + +
Sbjct: 1 MAKKINPISLRLGIIQVWN---FLLQNYDREFNNYAIILHKYLQLKLFLKLFFSKYKFFI 57
Query: 53 AKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEIN 112
+ + H + +Y ++ KK + +
Sbjct: 58 SHMDFWCYHHFIFLNIYYTNIDFLVKKKFIKYLLNIVNIIKKKFLLKIKIRLYYKIEYFS 117
Query: 113 A-TLIAQSIAQQLERRVVFRRA----MKRAVQSAMRFGA------------DGVKVIASG 155
LI+ LE+ F + M+ ++ + G K+ G
Sbjct: 118 TVHLISNYFCYLLEKNFSFSKILWVLMRFLEKNLNTYKIMYSKNGPIKMVLKGFKIKLVG 177
Query: 156 RLNGAE--LSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
R ++++ Y G + L +L+ +++ T G CG+ +++
Sbjct: 178 RFKNTRNPMAKSVEYNVGSLSLISLKNQVEFSKTEVMTKLGVCGLHIWLFY 228
>gi|118724747|gb|ABL10932.1| ribosomal protein S3 [Codium convolutum]
gi|118724891|gb|ABL11028.1| ribosomal protein S3 [Codium lucasii subsp. capense]
Length = 44
Score = 65.8 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 31/43 (72%)
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+RTE EG+VPLQ+L A+IDY +A+T YG GIK+++ +
Sbjct: 1 ARTEWVQEGQVPLQSLAANIDYTFQIAKTIYGILGIKIWIFQK 43
>gi|118724729|gb|ABL10920.1| ribosomal protein S3 [Codium cf. bursa DHO2-176]
Length = 44
Score = 65.8 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 31/43 (72%)
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+RTE EG+VPLQTL A+IDY +A+T YG GIK+++ +
Sbjct: 1 ARTERIREGQVPLQTLSANIDYTFRIAKTIYGILGIKIWIFQK 43
>gi|323303371|gb|EGA57167.1| Rps3p [Saccharomyces cerevisiae FostersB]
Length = 136
Score = 65.8 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 24/87 (27%), Positives = 38/87 (43%), Gaps = 3/87 (3%)
Query: 120 IAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQT 177
+ +L + RRA V+ M GA G +V+ SG+L A ++ + +G + Q
Sbjct: 1 MKFKLLNGLAIRRAAYGVVRYVMESGAKGCEVVVSGKLRAA-RAKAMKFADGFLIHSGQP 59
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSL 204
+ ID T G GIKV +
Sbjct: 60 VNDFIDTATRHVLMRQGVLGIKVKIMR 86
>gi|223927300|gb|ACN23263.1| ribosomal protein S3 [Halimeda borneensis]
Length = 204
Score = 65.4 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 30/143 (20%), Positives = 60/143 (41%), Gaps = 19/143 (13%)
Query: 21 RWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTH-KNCRIIVYSARPGLIIGK 79
+W+A Y + ED +R L +AG KI I R + I++ + +P ++IGK
Sbjct: 1 QWYASKKYYSKYILEDHFLRTILPKQYAKAGFEKIEISRKIEDHIEIVIRAQKPEILIGK 60
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATL---------------IAQSIAQQL 124
KG ++ +K++ + S N+ + L IA + + L
Sbjct: 61 KGEKLKNFQKEIKKLIFKYRGFSSNKSRDVQSKQKLKVILYVIRCQTGASSIADFLVENL 120
Query: 125 ERRVVFRRAM---KRAVQSAMRF 144
E+R+ ++ K+ ++ +
Sbjct: 121 EKRIPYKIVFVLLKKHLKKIRQR 143
>gi|10802926|gb|AAG23674.1|AF288091_19 ribosomal protein S3 [Thraustochytrium aureum]
Length = 251
Score = 65.4 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 30/145 (20%), Positives = 58/145 (40%), Gaps = 6/145 (4%)
Query: 65 RIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQL 124
I + + + I K + +I + + ++ TL I QL
Sbjct: 95 YIEFFFLKKPIKIYLISIKPTSNGKFFRSRGLKDIQDVLQILDNFPLHKTLN-FFICAQL 153
Query: 125 ERRVVFRRAMKRAVQSAMRFGA-----DGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
E+ ++ + Q G+K+ GR+NG++ S+T G +PL +
Sbjct: 154 EKENHHQKIIDTIFQQVKINFQFYTKVKGIKISIKGRVNGSDRSKTHLLELGSIPLNSFN 213
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSL 204
A+I + TA+G G+K+Y++
Sbjct: 214 ANIFFNFQHVVTAFGVYGVKIYINY 238
>gi|28189875|dbj|BAC56552.1| similar to S3 ribosomal protein [Bos taurus]
Length = 145
Score = 65.4 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 4/130 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 17 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 76
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 77 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 136
Query: 158 NGAELSRTEC 167
G + +++
Sbjct: 137 RG-QRAKSMK 145
>gi|28189869|dbj|BAC56549.1| similar to ribosomal protein S3 [Bos taurus]
Length = 147
Score = 65.4 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 4/130 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 19 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 78
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RRA ++ M GA G +V+ SG+L
Sbjct: 79 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKL 138
Query: 158 NGAELSRTEC 167
G + +++
Sbjct: 139 RG-QRAKSMK 147
>gi|118724846|gb|ABL10998.1| ribosomal protein S3 [Codium intertextum]
gi|118724849|gb|ABL11000.1| ribosomal protein S3 [Codium intertextum]
Length = 44
Score = 65.4 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+RTE EG VPLQ+L A+IDY +A+T YG GIK+++ +
Sbjct: 1 ARTEWVQEGPVPLQSLAANIDYTCQIAKTIYGILGIKIWIFQK 43
>gi|207110501|ref|ZP_03244663.1| 30S ribosomal protein S3 [Helicobacter pylori HPKX_438_CA4C1]
Length = 100
Score = 65.4 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 40/93 (43%), Positives = 61/93 (65%)
Query: 33 LHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLS 92
+ ED KIR++L+ L AGV++I+IER K R+ V +ARPGLIIGKKG DIEK+++ L
Sbjct: 3 IDEDNKIRKFLKKELYYAGVSEIVIERAAKKLRVTVVAARPGLIIGKKGVDIEKVKEGLK 62
Query: 93 NMTNSEIHLSVNEVPKPEINATLIAQSIAQQLE 125
+ E+ +++ EV +P+ +A L L+
Sbjct: 63 TLIKKEVSINIKEVKRPQADAQLALSFFLSPLK 95
>gi|118724750|gb|ABL10934.1| ribosomal protein S3 [Codium coralloides]
Length = 44
Score = 65.4 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 32/43 (74%)
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+RTE EG+VPLQ+L A+IDY + +A+T YG GIK+++ +
Sbjct: 1 ARTEWVQEGQVPLQSLAANIDYTSQIAKTIYGILGIKIWIFQK 43
>gi|302749091|gb|ADL64025.1| ribosomal protein S3 [Tinospora sagittata]
Length = 470
Score = 65.0 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 5/149 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 323 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 381
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAVQSAMRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + + + M G +G+++
Sbjct: 382 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSILSQIVKDIPLVMPKGVEGIRICC 441
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHI 182
SGR GAE++RTEC G+ I
Sbjct: 442 SGRSEGAEIARTECGKYGKTSRNVFNQKI 470
>gi|302748790|gb|ADL63875.1| ribosomal protein S3 [Hua gabonii]
Length = 473
Score = 65.0 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 37/150 (24%), Positives = 67/150 (44%), Gaps = 9/150 (6%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ I + + G +++K+R LSN T
Sbjct: 327 KVMELIEQLINLGGIGEL---IKGIEMMIEIILRNRIIPYGYNSYLNEVKKMRSLLSNRT 383
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ QL + FR + VQ M+ G +G+++
Sbjct: 384 NTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIFSKIVQDIPLVMKKGVEGIRI 443
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAH 181
SGR GAE++RTEC G+
Sbjct: 444 CCSGRSEGAEIARTECGKYGKTSRNVFNQK 473
>gi|118724894|gb|ABL11030.1| ribosomal protein S3 [Codium megalophysum]
Length = 56
Score = 65.0 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 31/46 (67%)
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEV 208
+RTE +G+VPLQ+L A+IDY A+T YG GIK+++ + +
Sbjct: 1 ARTEWVRKGQVPLQSLAANIDYSFQTAKTIYGILGIKIWIFQKKSI 46
>gi|322816239|gb|EFZ24621.1| 40S ribosomal protein S3, putative [Trypanosoma cruzi]
Length = 162
Score = 64.6 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 63/136 (46%), Gaps = 4/136 (2%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E+L+ L G A + T I++ + + ++G+KG I ++ ++ +
Sbjct: 22 EFLKRELADDGFAGVEHRVTSTRTEIVIRATKTREVLGEKGRRIRELTACLQQRFHYKEG 81
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
++ L V ++A A+S+ +L + RRA ++ M GA G +V G++
Sbjct: 82 KLQLFAERVEVRGLSAMAQAESLRFKLLSNLQVRRAAMGIIRHVMESGAKGCEVTVGGKI 141
Query: 158 NGAELSRTECYLEGRV 173
G + +++ + +G +
Sbjct: 142 KG-QRAKSMTFRDGYM 156
>gi|313768508|ref|YP_004062184.1| ribosomal protein S3 [Gracilariophila oryzoides]
gi|312844635|gb|ADR03200.1| ribosomal protein S3 [Gracilariophila oryzoides]
Length = 231
Score = 64.6 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 38/237 (16%), Positives = 85/237 (35%), Gaps = 42/237 (17%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYG-------------ALLHEDLKIREYLQCHL 47
M +KINPI RLG+ W+ + G ++ + + ++L
Sbjct: 1 MAKKINPISLRLGLTQVWDFTLQSYGKLISWHILLLLKQLQLKKVVAQIFNLNKFL---- 56
Query: 48 KQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRK-KLSNMTNSEIHLSVNEV 106
V + H + +Y + KK + I K + + ++ L +
Sbjct: 57 ----VGEQEFWYYHNKLFLNIYFTDHIVKNQKKYSFIFKKIALLIFEWFSLKVQLRIFRK 112
Query: 107 PKPEINATLI---AQSIAQQ--------------LERRVVFRRAMKRAVQSAMRFGADGV 149
L+ A + +Q LE+ + + + + + G
Sbjct: 113 TNWITTPNLLINYATYLLKQHKNPNKVLWQLCQFLEKNLNYTKIVHSSC-GIHLVNLKGF 171
Query: 150 KVIASGRLN--GAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
K+ GR + ++S++ G + L +L++ +++ T GSCG+++++
Sbjct: 172 KIRLVGRSDNTKTQMSKSIQQGFGSLSLMSLKSRVEFANTELYTKLGSCGLQIWLFY 228
>gi|269986910|gb|EEZ93186.1| KH type 2 domain protein [Candidatus Parvarchaeum acidiphilum
ARMAN-4]
Length = 223
Score = 64.6 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 44/184 (23%), Positives = 79/184 (42%), Gaps = 17/184 (9%)
Query: 35 EDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNM 94
D REYL + G++ I IE+T +I++ + +PG II + + + K+L
Sbjct: 12 NDETAREYLFKKFSRFGISDIRIEKTPLGMKIVIKTPKPGAIITRANQILRESSKELGEY 71
Query: 95 TNSEIHLSVNE-VPKPEINATLIAQSIAQQLERR--VVFRRAMKRAVQSAMRFGADGVKV 151
N E E P ++ ++A SIA ++ + + ++ +A+ S M GA GV++
Sbjct: 72 FNQESPRIEVEGSQDPNLDPAIVADSIAFKIAKYGPMKYKVVAHKAMDSIMSAGARGVEI 131
Query: 152 IASGRLNGAELSRTECYL--------EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
G + E + + G+V +R+ GS GIKV +
Sbjct: 132 EIGGVIK--ERAAHFKFRPTGSVMPKTGQVEFFGVRS----AKKQLVLKRGSIGIKVTIV 185
Query: 204 LRDE 207
+ E
Sbjct: 186 VPTE 189
>gi|28189312|dbj|BAC56347.1| similar to S3 ribosomal protein [Bos taurus]
Length = 138
Score = 64.6 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 41/99 (41%), Gaps = 7/99 (7%)
Query: 122 QQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLR 179
+L + RRA ++ M GA G +V+ SG+L G + + + +++G + +
Sbjct: 2 YKLLGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG-QRAXSMKFVDGLMIHSGDPVN 60
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLR----DEVSDSDST 214
++D G GIKV + L ++
Sbjct: 61 YYVDTAVRHVLLRQGVLGIKVKIMLPWDPTGKIGPKKPL 99
>gi|183398092|gb|ACC62506.1| ribosomal protein S3 (predicted) [Rhinolophus ferrumequinum]
Length = 163
Score = 64.6 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 66/141 (46%), Gaps = 4/141 (2%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ + S
Sbjct: 23 EFLTRELAEDGYSGVEVRLTLTRTEIIILATRTQNVLGEKGQSIRELTAVVQKRFGFPES 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A A+S+ +L + RR +Q M GA G +V SG+L
Sbjct: 83 SVELYAEKVATRSLCAIGQAESLHHKLLGGLAVRRTCYGVLQFIMESGAKGGEVGVSGKL 142
Query: 158 NGAELSRTECYLEGRVPLQTL 178
G + +++ +++G + L T+
Sbjct: 143 RG-QRAKSMMFVDGLMTLLTI 162
>gi|393463|emb|CAA46980.1| unnamed protein product [Chlamydomonas reinhardtii]
Length = 271
Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFA--RGSEYGALLHEDLKIREYLQCHLKQ 49
MGQK++P+ FR+G+ S+WFA + Y + ED +R L
Sbjct: 1 MGQKVHPLGFRVGITKKHQSQWFARFQKYAYSQSVFEDHMLRTTLVNLFSN 51
>gi|255529385|gb|ACU12630.1| ribosomal protein S3 [Codium fragile]
Length = 40
Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 167 CYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+G+VPLQ+L A+IDY A+T YG GIK+++
Sbjct: 1 WIRKGQVPLQSLAANIDYCCRTAKTIYGILGIKIWIFQP 39
>gi|118724711|gb|ABL10908.1| ribosomal protein S3 [Codium arabicum]
gi|118724714|gb|ABL10910.1| ribosomal protein S3 [Codium arabicum]
Length = 44
Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+RTE +G+VPLQ+L A+IDY + +A+T YG GIK+++ +
Sbjct: 1 ARTEWVQDGQVPLQSLAANIDYTSQIAKTIYGILGIKIWIFQK 43
>gi|74325191|ref|YP_316611.1| ribosomal protein S3 [Thalassiosira pseudonana]
gi|74100257|gb|AAZ99418.1| ribosomal protein S3 [Thalassiosira pseudonana]
Length = 308
Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/165 (19%), Positives = 65/165 (39%), Gaps = 25/165 (15%)
Query: 62 KNCRIIVYSARPGLIIGKK-GTDIEKIRKKLSNMTNSEIHLSVNEVPKPEI--------N 112
++ ++ L K + K K + + S + + +
Sbjct: 140 TKGKVNIFVTMQNLNNQKNLSYNRIKNWKTIFKQLKKFVRNSFFKEAINILFVNITKRKS 199
Query: 113 ATLIAQSIAQQLE-------------RRVVFRRAMKRAVQ---SAMRFGADGVKVIASGR 156
A L+A+ I+ Q + + F +K+ ++ +A G G+K++ GR
Sbjct: 200 AKLLAEFISDQFKINQLKTDQMAISRKDNYFLGFLKQTIKLLINAEVSGLTGIKIVIKGR 259
Query: 157 LNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVY 201
N A +++ G+ LQ+ + IDY + A T G+ G+KV+
Sbjct: 260 FNRAPRAKSVTIQFGKFSLQSFDSKIDYFQSTAYTINGTFGVKVW 304
Score = 41.1 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 27/129 (20%), Positives = 54/129 (41%), Gaps = 4/129 (3%)
Query: 1 MGQKINPILFRLGV-NCTWNSRWFARGSEYGA-LLHEDLKIREYLQCH--LKQAGVAKIL 56
MGQK++ +FRLGV W + + +E + L++ L+I++YL L + +
Sbjct: 1 MGQKVDARIFRLGVGKKNWELKHIEKNNEESSLYLYKTLEIQKYLNRFFSLYKVKIHNCK 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
I ++ + ++ + I ++ K +KKLS N+ L
Sbjct: 61 IFYSNNSLQLFISFYITEKTIYIINKNLTKYQKKLSIRFKRPCIQKKNKKSILSYKPNLK 120
Query: 117 AQSIAQQLE 125
+ Q+ +
Sbjct: 121 QTMMLQEFQ 129
>gi|319412276|gb|ADV41813.1| ribosomal protein S3 [Bigelowiella natans]
Length = 252
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 148 GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
G++++ SG+LNG + + + G +PLQ IDY V T +G GIK+++ R
Sbjct: 189 GLRLLISGKLNGRPRKKKKEFRFGIMPLQAFSHDIDYSYRVVVTKFGVFGIKLWLFKR 246
>gi|302748685|gb|ADL63823.1| ribosomal protein S3 [Curtisia dentata]
Length = 435
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 5/146 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E+++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 291 KVMEFIEKLIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 349
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M+ G +G+++
Sbjct: 350 NTLIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICC 409
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLR 179
SGRL GAE++RTEC G+
Sbjct: 410 SGRLKGAEIARTECGKYGKTSRNVFN 435
>gi|313768536|ref|YP_004062211.1| ribosomal protein S3 [Gracilariopsis andersonii]
gi|312844663|gb|ADR03227.1| ribosomal protein S3 [Gracilariopsis andersonii]
Length = 231
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 42/238 (17%), Positives = 84/238 (35%), Gaps = 44/238 (18%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQC--------------- 45
M +KINPI RLG+ W+ F YG L I Y+
Sbjct: 1 MAKKINPISLRLGLTQVWD---FTL-QNYGKL------ISWYVLLLLKQLQLKRVVAQIF 50
Query: 46 HLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRK-KLSNMTNSEIHLSVN 104
+ + V + H + VY + K + I K + + ++ L V
Sbjct: 51 NFNKFLVGEQEFWYYHNKLFLNVYFTDHIIKNQNKYSLILKNISLLIFEWFSLKVQLRVF 110
Query: 105 EVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRF----------------GADG 148
L+ + LE++ + + + Q + + G
Sbjct: 111 RKTNWITTPDLLISYASYLLEQQKNPNKVLWQLCQFSEKQLNCTKIVYSSRGIRLVNLKG 170
Query: 149 VKVIASGRLNGA--ELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
K+ GR + ++S++ G + L +L++ +++ + T GSCG+++++
Sbjct: 171 FKIRLVGRFDNTKNQMSKSIQQGFGSLSLMSLKSRVEFVSKELYTKLGSCGLQIWLFY 228
>gi|237862670|gb|ACR24960.1| ribosomal protein S3 [Lepidochitona cinerea]
Length = 156
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/136 (22%), Positives = 64/136 (47%), Gaps = 4/136 (2%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E+L L + G + + + T II+ + + ++G+KG I ++ +K N
Sbjct: 22 EFLTRELAEDGYSGVEVRVTQTRTEIIILATKTQNVLGEKGRRIRELTAVVQKRFNFPEG 81
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A +S+ +L + RRA ++ M A G +V+ SG+L
Sbjct: 82 SVELYAEKVATRGLCAIAQCESLRYKLIGGLAVRRACYGVLKFIMESQAKGCEVVVSGKL 141
Query: 158 NGAELSRTECYLEGRV 173
G + +++ +++G +
Sbjct: 142 RG-QRAKSMTFVDGLM 156
>gi|1171597|emb|CAA64581.1| rps3 [Plasmodium falciparum]
Length = 214
Score = 63.1 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/218 (16%), Positives = 80/218 (36%), Gaps = 20/218 (9%)
Query: 1 MGQKINPILFRLGVNCTWNSRWF---ARGSEYGALLHEDLKIR-----------EYLQCH 46
MGQK++P++FR + + + ++ ++ Y + I +
Sbjct: 1 MGQKVHPLIFRGLIYKNYLNNFYINISKNKYYLINILLTYFIYYNMYRICNYKEDNYINI 60
Query: 47 LKQAGVAKILIERTHKNCRIIVYSARP-GLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNE 105
+ K +I N +Y+ + +++ + + ++ N
Sbjct: 61 NINFSINKFVITFFLYNKYYNIYNLKYIFILLNYFNYYYYNYYNYMCFLKIKYVNNINNI 120
Query: 106 VPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRT 165
+ + +L ++ +K+ F G+K+ SGR + ++
Sbjct: 121 NVIMYYIKKYYIKYKSLKLIFDYLYNNILKK-----NNFNIKGLKIKFSGRFKNSLKTKI 175
Query: 166 ECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
E Y+ G + L TL +I Y + T YG IK++++
Sbjct: 176 EIYIYGIISLSTLNNNIKYINDIINTKYGILSIKIWLN 213
>gi|41203465|ref|NP_957725.1| ribosomal protein S3 [Emiliania huxleyi]
gi|33114151|gb|AAP94707.1| ribosomal protein S3 [Emiliania huxleyi]
Length = 283
Score = 63.1 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 49/282 (17%), Positives = 99/282 (35%), Gaps = 77/282 (27%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGV-AKILIER 59
M QK NPIL RL +W + + ++ L DL+IR ++ K + + + +
Sbjct: 1 MSQKTNPILSRLNNRRSWLTINSSDNRQFNNLFFTDLQIRYFISVVSKFFSILSDKPLIK 60
Query: 60 THKNCRIIVYSARPGLIIG----------------------------------------- 78
T+K + + S +++
Sbjct: 61 TYKFNSVFLRSNFTTIMLMGWPRALKKRIFSFNSRVSSYKKVRENHLNFAHFFGLTRFVL 120
Query: 79 --------KKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLE----- 125
+K +K+ +++ + +I S + +A +IA I Q++
Sbjct: 121 YDSVLRNLQKNRKQNASKKRKTSVLSKKIVKSTDFSLVRSNSAQIIANYIGWQIQASLKQ 180
Query: 126 RRVVFRRAMKRAVQSAMRFGAD--------------------GVKVIASGRLNGAELSRT 165
R F+ K+ + ++ GVKVI +GR + R
Sbjct: 181 RDWNFQSNFKKGINKTIQSFLKRNVDQTVKSILSMKSKNPICGVKVICAGRWKKTKSGRK 240
Query: 166 ECYL--EGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+ + +G++ +Q+ + +D+G T +GS KV V+
Sbjct: 241 QKFTLYKGKLAMQSYSSFLDFGFYHGNTKFGSFSFKVLVAYN 282
>gi|41057930|gb|AAR98922.1| ribosomal protein S3 [Ostrinia nubilalis]
Length = 125
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/125 (24%), Positives = 60/125 (48%), Gaps = 4/125 (3%)
Query: 47 LKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSV 103
L + G + + + T II+ + R ++G+KG I ++ +K N+ + L
Sbjct: 1 LAEDGYSGVEVRVTPTRSEIIIMATRTQSVLGEKGRRIRELTSVVQKRFNIPEQSVELYA 60
Query: 104 NEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELS 163
+V + A A+S+ +L + RRA ++ M GA G +V+ SG+L G + +
Sbjct: 61 EKVATRGLCAIAQAESLRYKLIGGLAVRRACYGVLRFIMESGARGCEVVVSGKLRG-QRA 119
Query: 164 RTECY 168
++ +
Sbjct: 120 KSMKF 124
>gi|288191225|gb|ADC43965.1| ribosomal protein S3 [Marathrum cf. oxycarpum Cachoeirc 9/1996]
Length = 405
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQL-ERRVVFRRAMKRAVQS 140
I+K+ LSN TN+ I + ++ +A+ IAQ I+ +L ++++ FR + + V+
Sbjct: 296 FSIKKMLSLLSNRTNTNIFIFSVKIQSVYQSASPIAQDISLKLRKKKISFRSSFSKIVKE 355
Query: 141 AM---RFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTA 187
+ G +G+++ SGR G +++RTEC G+ IDY TA
Sbjct: 356 IEFGLKKGVEGIRICCSGRSKGKKIARTECGNYGKTSRNVFNQKIDYATA 405
>gi|242079979|ref|XP_002444758.1| hypothetical protein SORBIDRAFT_07g027430 [Sorghum bicolor]
gi|241941108|gb|EES14253.1| hypothetical protein SORBIDRAFT_07g027430 [Sorghum bicolor]
Length = 149
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 46/75 (61%)
Query: 83 DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAM 142
++EK +K N N +++++ +V +P ++A+ IA QL+ RV F++AMK+A++
Sbjct: 74 ELEKDFQKGVNSVNQRLNIAIEKVKEPYRQPNILAEYIAFQLKNRVSFQKAMKKAIELTK 133
Query: 143 RFGADGVKVIASGRL 157
+ G+K+ +G L
Sbjct: 134 KADIKGIKIQIAGCL 148
>gi|302748873|gb|ADL63916.1| ribosomal protein S3 [Meliosma squamulata]
Length = 454
Score = 62.3 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 38/146 (26%), Positives = 69/146 (47%), Gaps = 5/146 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E ++ + G+ ++ I+ II+ + R +++K+R LSN TN+
Sbjct: 310 KVMELIEKFIDLGGIGEL-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNT 368
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q + FR + V+ M G +G+++
Sbjct: 369 NTFIESVKIKSVYQSASPIAQDISFQPRNKTRSFRSIFSKIVKDIPLVMPKGVEGIRICC 428
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLR 179
SGRL GAE++RTEC G+
Sbjct: 429 SGRLEGAEIARTECGKYGKTSRNVFH 454
>gi|118724705|gb|ABL10904.1| ribosomal protein S3 [Codium adhaerens]
Length = 44
Score = 62.3 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+RTE EG+VPLQ+L A+IDY +A+T G GIK+++ +
Sbjct: 1 ARTEWVQEGQVPLQSLAANIDYTFQIAKTIXGILGIKIWIFQK 43
>gi|118724861|gb|ABL11008.1| ribosomal protein S3 [Codium isthmocladum]
Length = 44
Score = 62.3 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 163 SRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+RTE EG+VPLQTL A+ID +T YG GIK+++ +
Sbjct: 1 ARTEWVREGQVPLQTLAANIDXXFRTXKTIYGXLGIKIWIFQK 43
>gi|302749027|gb|ADL63993.1| ribosomal protein S3 [Scrophularia marilandica]
Length = 424
Score = 62.3 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 9/144 (6%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + + ++ I + + G +++K+R LSN T
Sbjct: 284 KVMELIEKFIDLGRIGEL---LKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRT 340
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKV 151
N+ + ++ +A+ IAQ I+ QL +R FR + + V++ M+ G G+++
Sbjct: 341 NTNTLIESVKIKSVYQSASPIAQDISFQLRTKRRSFRSILSQIVKNIPLVMKKGVTGIRI 400
Query: 152 IASGRLNGAELSRTECYLEGRVPL 175
SGR GAE++RTEC G+
Sbjct: 401 CCSGRSEGAEIARTECGKYGKTSC 424
>gi|11467072|ref|NP_042548.1| ribosomal protein S3 [Acanthamoeba castellanii]
gi|1173300|sp|P46754|RT03_ACACA RecName: Full=Ribosomal protein S3, mitochondrial
gi|562053|gb|AAD11841.1| ribosomal protein S3 [Acanthamoeba castellanii]
Length = 298
Score = 62.3 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 35/185 (18%), Positives = 72/185 (38%), Gaps = 12/185 (6%)
Query: 27 SEYGALLHEDLKIRE---YLQCHLKQAGVAKILIERTHKNCRIIVY--SARPGLIIGKKG 81
+Y L ++ ++++ L ++ L KN + +Y S + + K
Sbjct: 109 KKYRKALRQNKQLKQGLFMLLKKRVILRYSRKLFFLFIKNKILKIYWESFKTLSLFYLKR 168
Query: 82 TDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLER-RVVFRRAMKRAVQS 140
K+ + S+++++ N + + +I + L +F+ MK+
Sbjct: 169 FSRSSFLSKIFIIGLSKMNVNANIISEFFFIRLTQYYTIWEVLRNINFLFKSLMKK---- 224
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200
R G K+ SGR + + + G + T+++ +DY Y SC IKV
Sbjct: 225 --RKLVKGYKITCSGRFSRKQRTTYSWKAFGSLAFSTVKSKLDYSYKTIALKYSSCTIKV 282
Query: 201 YVSLR 205
+V L
Sbjct: 283 WVRLG 287
Score = 55.0 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 32/139 (23%), Positives = 55/139 (39%), Gaps = 11/139 (7%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKI----REYLQCHLKQAGVA--- 53
MG INPI +RL WN+ WF+ Y L+++D+ I R++L HL
Sbjct: 1 MGHIINPISYRLYNIRYWNNNWFSGSLNYSYLINQDILIDRFFRKFLTTHLDSTNAGIIF 60
Query: 54 -KILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEIN 112
+ I R+ N + VY L + + + N + + + +
Sbjct: 61 VNLKIIRSFNNISLYVYIHDSFLDLLFFNLKKNARFLLIKRLFNKKFYKKYRKALRQNKQ 120
Query: 113 ATLIAQSIAQQLERRVVFR 131
Q + L++RV+ R
Sbjct: 121 LK---QGLFMLLKKRVILR 136
>gi|254751222|ref|ZP_05203260.1| 30S ribosomal protein S3 [Bacillus anthracis str. Vollum]
Length = 26
Score = 61.9 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 16/26 (61%), Positives = 18/26 (69%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARG 26
MGQK+NPI R+GV W SRWFA
Sbjct: 1 MGQKVNPIGLRVGVIRDWESRWFAEK 26
>gi|118724819|gb|ABL10980.1| ribosomal protein S3 [Codium galeatum]
Length = 33
Score = 61.5 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 173 VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
VPLQ+L A+IDY A+T YG GIK+++
Sbjct: 1 VPLQSLSANIDYCCRTAKTIYGILGIKIWIFQP 33
>gi|4680363|gb|AAD27643.1|AF133129_1 ribosomal protein S3 [Meriones unguiculatus]
Length = 128
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 39/90 (43%), Gaps = 7/90 (7%)
Query: 131 RRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAV 188
RRA ++ M GA G +V+ SG+L G + +++ +++G + + ++D
Sbjct: 1 RRACYGVLRFIMESGAKGCEVVVSGKLRG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRH 59
Query: 189 AETAYGSCGIKVYVSLR----DEVSDSDST 214
G GIKV + L ++
Sbjct: 60 VLLRQGVLGIKVKIMLPWDPSGKIGPKKPL 89
>gi|188572377|gb|ACD65095.1| putative 40S ribosomal protein RPS3 [Novocrania anomala]
Length = 170
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 68/150 (45%), Gaps = 5/150 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNS 97
E+L L + G + + + T II+ + R ++G+KG I ++ +K +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTHNVLGEKGRRIRELTSVVQKRFSFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L +V + A +S+ +L + R+A ++ M GA+G +V+ SG+L
Sbjct: 83 TVELYAEKVATRGLCAIAQCESLRYKLIGGLAVRQACYGVLRFIMESGANGCEVVVSGKL 142
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTA 187
G + ++ +++G + + DY
Sbjct: 143 RG-QRAKALKFVDGLM-IHRGEPTNDYAET 170
>gi|224999226|gb|ACN78384.1| ribosomal protein S3 [Codium fragile]
Length = 34
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 173 VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
VPLQ+L A+IDY A+T YG GIK+++
Sbjct: 1 VPLQSLAANIDYCCRTAKTIYGILGIKIWIFQP 33
>gi|255529409|gb|ACU12646.1| ribosomal protein S3 [Codium fragile]
Length = 35
Score = 60.4 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 172 RVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+VPLQ+L A+IDY A+T YG GIK+++
Sbjct: 1 KVPLQSLAANIDYCCRTAKTIYGILGIKIWIFQP 34
>gi|324309745|gb|ADY18526.1| ribosomal protein S3 [Phaeodactylum tricornutum]
Length = 367
Score = 60.4 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 32/177 (18%), Positives = 60/177 (33%), Gaps = 16/177 (9%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGS--EYGALLHEDLKIREYLQCHLKQAG--VAKIL 56
MGQK NP +FRLG W S+ + E DL+IR+++ LK G +
Sbjct: 1 MGQKTNPTIFRLGKTKKWKSK-YIEKKSPESALYAFRDLEIRKFINKILKDKGLLIHNCQ 59
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLI 116
+ I + + K ++ L +
Sbjct: 60 LRYLENELHIFLSYCITAKAL--------ATIKIHHKGQGVKLKLQKTNFTENFREKYFT 111
Query: 117 AQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV 173
+ +L+R V ++R ++ + G K + G++ + + Y R+
Sbjct: 112 LEK---KLKRYVHYQRIIENCHYTTTVKKYLGKKQFSKGKIAIKKSHCSLKYRRARI 165
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/174 (18%), Positives = 75/174 (43%), Gaps = 11/174 (6%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCR--IIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE 98
+ + +K+ I K + + + I KK I ++RK + E
Sbjct: 193 NCVSKSISFFTNSKLDIFLNLKQLNKPTRIRFTKIQIRILKK--IIGQLRKYKHSAFFEE 250
Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERR---VVFRRAMKRAV---QSAMRFGADGVKVI 152
+ E + L+A+ +A +L ++ F +K A+ + + +K++
Sbjct: 251 GINLILEYTLNSQPSNLLAEFVANELRKQKRHNFFLGFIKSALHLLNNNIFVSQKNIKLM 310
Query: 153 ASGRLNGAELSRTECYLEGR-VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
GR NG ++ + G+ V + ++++++DY V+ T+ G+ G+K++ +
Sbjct: 311 IKGRFNGTPRAKKRVMIIGKGVSVLSIKSNLDYAETVSYTSNGTFGVKIWTCEK 364
>gi|133907947|gb|ABO42433.1| ribosomal protein S3 [Tetrastigma obovatum]
Length = 447
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/149 (22%), Positives = 66/149 (44%), Gaps = 11/149 (7%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT--DIEKIRKKLSNMT 95
K+ E ++ + G+ ++ I + + G +++K+R LSN T
Sbjct: 303 KVMELIEKFIDLGGIGEL---IKGIEMMIEIILRNRRIPYGXNSYLNEVKKMRSLLSNRT 359
Query: 96 NSEIHLSVNEVPKPEINATLIAQSIAQQLER-----RVVFRRAMKRAVQSAMRFGADGVK 150
N+ + ++ +A+ IAQ I+ Q R +F + +K + M+ G +G++
Sbjct: 360 NTNTLIESVKIKSVYQSASPIAQDISFQPRNXTRSFRSLFSKIVKD-IPLVMKKGVEGIR 418
Query: 151 VIASGRLNGAELSRTECYLEGRVPLQTLR 179
+ SGR GAE++ TEC G+
Sbjct: 419 ICCSGRSKGAEIAXTECGKYGKTSRNVFN 447
>gi|148684439|gb|EDL16386.1| ribosomal protein S3, isoform CRA_a [Mus musculus]
Length = 135
Score = 59.6 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/129 (20%), Positives = 55/129 (42%), Gaps = 6/129 (4%)
Query: 71 ARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIAQSIAQQLERR 127
R ++G+KG I ++ + + L +V + A A+S+ +L
Sbjct: 7 YRTQNVLGEKGRRIRELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGG 66
Query: 128 VVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYG 185
+ RRA ++ M GA G +V+ SG+L G + +++ +++G + + ++D
Sbjct: 67 LAVRRACYGVLRFIMESGAKGCEVVVSGKLRG-QRAKSMKFVDGLMIHSGDPVNYYVDTA 125
Query: 186 TAVAETAYG 194
G
Sbjct: 126 VRHVLLRQG 134
>gi|270055836|gb|ACZ59179.1| ribosomal protein S3 [Phacelia insularis var. insularis]
gi|270055848|gb|ACZ59187.1| ribosomal protein S3 [Phacelia ivesiana]
gi|270055860|gb|ACZ59195.1| ribosomal protein S3 [Phacelia californica]
Length = 33
Score = 59.2 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 175 LQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
LQT+RA IDY + T YG GIK+++ + DE
Sbjct: 1 LQTIRAKIDYCSYTVRTIYGVLGIKIWIFIDDE 33
>gi|8247324|emb|CAB92940.1| putative 40S ribosomal protein S3 [Plasmodium falciparum 3D7]
Length = 110
Score = 59.2 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 3/82 (3%)
Query: 126 RRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGR--VPLQTLRAHID 183
+ + RRA ++ M GA G +VI SG+L A+ +++ + +G + + ++
Sbjct: 1 KGLAVRRACYGVLRHIMESGAKGCEVIVSGKLR-AQRAKSMKFRDGYLISTGEPSKRFVN 59
Query: 184 YGTAVAETAYGSCGIKVYVSLR 205
T A+ G GIKV + L
Sbjct: 60 TATRSAQLKQGVLGIKVKIMLP 81
>gi|255529426|gb|ACU12657.1| ribosomal protein S3 [Codium fragile]
Length = 33
Score = 59.2 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 15/32 (46%), Positives = 21/32 (65%)
Query: 174 PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
PLQ+L A+IDY A+T YG GIK+++
Sbjct: 1 PLQSLAANIDYCCRTAKTIYGILGIKIWIFQP 32
>gi|223942381|gb|ACN25274.1| unknown [Zea mays]
Length = 148
Score = 58.9 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 3/114 (2%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E L L + G + + + T II+ + R ++G+KG I ++ + N +
Sbjct: 23 EMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPEN 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKV 151
+ L +V + A A+S+ +L + RRA ++ M GA G +V
Sbjct: 83 GVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFVMESGAKGCEV 136
>gi|152061033|gb|AAI50502.1| RPS3 protein [Homo sapiens]
Length = 133
Score = 58.9 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 49/115 (42%), Gaps = 3/115 (2%)
Query: 83 DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAM 142
++ + +K + L +V + A A+S+ +L + RRA ++ M
Sbjct: 12 ELTAVVQKRFGFPEGSVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIM 71
Query: 143 RFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGS 195
GA G +V+ SG+L G + +++ +++G + + ++D G
Sbjct: 72 ESGAKGCEVVVSGKLRG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGV 125
>gi|269861307|ref|XP_002650365.1| SSU ribosomal protein S3P [Enterocytozoon bieneusi H348]
gi|220066196|gb|EED43690.1| SSU ribosomal protein S3P [Enterocytozoon bieneusi H348]
Length = 214
Score = 58.9 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/170 (17%), Positives = 69/170 (40%), Gaps = 6/170 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGT---DIEKIRKKLSNMTNS 97
E ++ A I ++ +I + P ++ KK ++ + + NM
Sbjct: 21 ELFGKLFQKETYAGIELKMNQTPIQIFIKVLNPAELLEKKPMIQKQLQNMIAQRLNMIPE 80
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
I + ++ + A+ + Q ++R + ++S + G GV + SG++
Sbjct: 81 HIRIVFEKIIDKALEPAYHAELLRQAFINVQPYKRTINSIIRSVRQAGGQGVCIRVSGKI 140
Query: 158 NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
G + ++ +++G + Q + +I A+A G GI++ + L
Sbjct: 141 KG-QRAKATKFIDGLLIQAGQPAKEYIRKAKAIALCKQGVIGIQISIMLP 189
>gi|239505101|gb|ACR78696.1| ribosomal protein S3 [Rimicaris exoculata]
Length = 126
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 54/116 (46%), Gaps = 4/116 (3%)
Query: 61 HKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIA 117
II+ + R ++G++G I ++ + + L +V + + A A
Sbjct: 1 PARTEIIILATRTQNVLGEEGRRIRELTSLVQKRFGFADGTVELYAEKVAQRGLCAIAQA 60
Query: 118 QSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV 173
+S+ +L + RRA ++ M GA G +V+ SG+L G + +++ + +G +
Sbjct: 61 ESLRYKLVGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG-QRAKSMKFTDGLM 115
>gi|130076568|gb|ABO31942.1| ribosomal protein S3 [Exbucklandia longipetala]
Length = 444
Score = 58.1 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 68/141 (48%), Gaps = 5/141 (3%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
K+ E + + G+ + I+ II+ + R +++K+R LSN TN+
Sbjct: 305 KVIELIDKFINPGGIGEF-IKGIEMMIEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNA 363
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLE-RRVVFRRAMKRAVQSA---MRFGADGVKVIA 153
+ ++ +A+ IAQ I+ Q +R FR + V++ M+ G G+++
Sbjct: 364 NTLIESVKIKSVYQSASTIAQDISFQPRNKRRSFRSIFSQIVKNIPLVMKKGVGGIRICC 423
Query: 154 SGRLNGAELSRTECYLEGRVP 174
SGR GA+++RTEC G+
Sbjct: 424 SGRSKGAKIARTECGKYGKTS 444
>gi|288191307|gb|ADC44006.1| ribosomal protein S3 [Medusandra richardsiana]
Length = 139
Score = 57.7 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 57/122 (46%), Gaps = 6/122 (4%)
Query: 66 IIVYSARPGLIIGKKGT--DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQ 123
I + + G +++K+R LSN TN+ + ++ +A+ IAQ I+ Q
Sbjct: 18 IEIILRNRRIPYGYNSYLNEVKKMRSLLSNRTNTNTLMESVKIKSVYQSASPIAQDISFQ 77
Query: 124 LERRVV-FRRAMKRAVQSA---MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLR 179
+ FR + V+ M+ G +G+++ SGRL GAE++RTEC G+
Sbjct: 78 PRNKTRSFRSIFSKIVKDIPLVMKKGVEGIRICCSGRLEGAEIARTECGKYGKTSRNVFN 137
Query: 180 AH 181
Sbjct: 138 QK 139
>gi|11466484|ref|NP_038187.1| ribosomal protein S3 [Chrysodidymus synuroideus]
gi|7110481|gb|AAF36953.1|AF222718_27 ribosomal protein S3 [Chrysodidymus synuroideus]
Length = 265
Score = 57.3 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 138 VQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCG 197
+++ G+K++ +G+L G S T +G +P QTL+ ID+ A T YG G
Sbjct: 197 IKNKFSNNILGIKIVLNGKLRGKVRSNTIIISKGSIPNQTLKKRIDFNQADIFTKYGVYG 256
Query: 198 IKVYVSL 204
IK++V+L
Sbjct: 257 IKIWVNL 263
>gi|294882949|ref|XP_002769895.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
gi|239873720|gb|EER02613.1| 40S ribosomal protein S3, putative [Perkinsus marinus ATCC 50983]
Length = 157
Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 47/117 (40%), Gaps = 14/117 (11%)
Query: 116 IAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPL 175
A+S+ +L + RRA ++ M GA GV+V SG+L A+ ++ + +G + L
Sbjct: 2 QAESLRYKLLGGLPVRRAAYGVLRFVMENGAKGVEVTVSGKLR-AQRAKVMKFADGYL-L 59
Query: 176 QTLRAH---IDYGTAVAETAYGSCGIKVYVSL---------RDEVSDSDSTIPAAEH 220
T +D + G GI+V + + D TI +
Sbjct: 60 STGTPKEMYVDQAIRNVDMRQGILGIRVKIMMAYDPEGKSGPKTRLPDDITIHEPKE 116
>gi|242222173|ref|XP_002476815.1| 40S ribosomal protein S3 [Postia placenta Mad-698-R]
gi|220723885|gb|EED77980.1| 40S ribosomal protein S3 [Postia placenta Mad-698-R]
Length = 136
Score = 56.5 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 7/84 (8%)
Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIK 199
M GA G +V+ SG+L A +++ + +G + Q +DY G GIK
Sbjct: 1 MESGAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPALDFVDYAVRHVMLRQGVLGIK 59
Query: 200 VYVSLR----DEVSDSDSTIPAAE 219
V + +V + +
Sbjct: 60 VKIMKGWDPEGQVGPRKPLPDSVQ 83
>gi|255529374|gb|ACU12623.1| ribosomal protein S3 [Codium fragile]
gi|255529423|gb|ACU12655.1| ribosomal protein S3 [Codium fragile]
gi|255529429|gb|ACU12659.1| ribosomal protein S3 [Codium fragile]
gi|255529432|gb|ACU12661.1| ribosomal protein S3 [Codium fragile]
gi|255529435|gb|ACU12663.1| ribosomal protein S3 [Codium fragile]
gi|255529438|gb|ACU12665.1| ribosomal protein S3 [Codium fragile]
gi|255529441|gb|ACU12667.1| ribosomal protein S3 [Codium fragile]
gi|255529444|gb|ACU12669.1| ribosomal protein S3 [Codium fragile]
gi|255529447|gb|ACU12671.1| ribosomal protein S3 [Codium fragile]
gi|255529452|gb|ACU12674.1| ribosomal protein S3 [Codium fragile]
gi|255529455|gb|ACU12676.1| ribosomal protein S3 [Codium fragile]
gi|255529458|gb|ACU12678.1| ribosomal protein S3 [Codium fragile]
gi|255529461|gb|ACU12680.1| ribosomal protein S3 [Codium fragile]
Length = 32
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 175 LQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
LQ+L A+IDY A+T YG GIK+++
Sbjct: 1 LQSLAANIDYCCRTAKTIYGILGIKIWIFQP 31
>gi|89513159|gb|ABD74442.1| ribosomal protein S3 [Anopheles quadrimaculatus]
Length = 111
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 3/109 (2%)
Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIR---KKLSNMTNSEIHLSVNEVPKPE 110
+ + T II+ + R ++G+KG I ++ +K + + L +V
Sbjct: 1 GVEVRVTPTRTEIIIMATRTQNVLGEKGRRIRELTAVVQKRFDFAPGTVELYAEKVATRG 60
Query: 111 INATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNG 159
+ A A+S+ +L + RRA ++ M GA G +V+ SG+L G
Sbjct: 61 LCAIAQAESLRCKLIGGLAVRRACYGVLRFIMESGAKGCEVVVSGKLRG 109
>gi|221103188|ref|XP_002170678.1| PREDICTED: similar to ribosomal protein S3, partial [Hydra
magnipapillata]
Length = 122
Score = 55.4 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 38/94 (40%), Gaps = 8/94 (8%)
Query: 133 AMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAE 190
A V+ M GA G +VI SG+L G + +++ + +G + ++ +ID
Sbjct: 1 ACYGVVRFIMESGAKGCEVIVSGKLRG-QRAKSMKFTDGFMIHSGYPIQEYIDTAVRHVY 59
Query: 191 TAYGSCGIKVYVSLRDEVSDSDSTIPAAEHRVVE 224
G GIKV + D T + +
Sbjct: 60 LRQGVLGIKVKIM-----LPWDPTGKTGPKKPLP 88
>gi|90076128|dbj|BAE87744.1| unnamed protein product [Macaca fascicularis]
gi|90076700|dbj|BAE88030.1| unnamed protein product [Macaca fascicularis]
Length = 147
Score = 55.4 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/113 (22%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVK 150
+ L +V + A A+S+ +L + RRA ++ M GA G++
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRACYGVLRFIMESGAKGLR 135
>gi|291010626|ref|YP_003495139.1| ribosomal protein S3 [Pycnococcus provasolii]
gi|258406749|gb|ACV72095.1| ribosomal protein S3 [Pycnococcus provasolii]
Length = 324
Score = 55.4 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/161 (16%), Positives = 58/161 (36%), Gaps = 23/161 (14%)
Query: 44 QCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSV 103
+ L +I++ + +I ++ + ++++ + I
Sbjct: 187 KGSLLLRFTENFIIKQFKQAYKICIFDTKKSNFFFSSQLFVKELCFLFLVLKKKRIAKEF 246
Query: 104 NEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELS 163
+V + + +FR VQ + FG GV V+ SGRL G +
Sbjct: 247 FKVFRSWL-----------------IFR------VQKSFAFGIKGVSVVISGRLPGRGKA 283
Query: 164 RTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
+ + G+ P Q + +D+ ++ G +KV+V
Sbjct: 284 GIKKFRVGKTPFQNSKQRLDFWHQSFRSSRGVFHVKVWVLY 324
>gi|118725005|gb|ABL11104.1| ribosomal protein S3 [Codium sp. DB2006]
Length = 34
Score = 55.0 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 173 VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
VPLQ+L A+IDY +A+T YG GIK+++ +
Sbjct: 1 VPLQSLAANIDYTFQIAKTIYGILGIKIWIFQK 33
>gi|326632110|gb|ADZ99057.1| ribosomal protein S3 [Physarum polycephalum]
Length = 478
Score = 55.0 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 52/127 (40%), Gaps = 1/127 (0%)
Query: 84 IEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMR 143
I + K + ++ + + +A + I+ +L + F +K ++ R
Sbjct: 341 IFTMAKTTFIPNDRQLIVRFLGLNNRNYSAQFLVNYISIKLGQYFNFNSIIKPIIRYYKR 400
Query: 144 FG-ADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202
DG + I SGRL E + +PL T + +DY + +G GIK+Y+
Sbjct: 401 RSAIDGFRFIISGRLTRKERAAYIVKAYKAMPLATAKIRVDYASDFKIMRFGVVGIKIYL 460
Query: 203 SLRDEVS 209
++V
Sbjct: 461 LTSEDVP 467
Score = 40.7 bits (94), Expect = 0.16, Method: Composition-based stats.
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 1 MGQKINPILFRLGVNCTWN 19
MG KI+P +FRLG++ W
Sbjct: 1 MGHKIHPDIFRLGISKDWQ 19
>gi|149391165|gb|ABR25600.1| 40S ribosomal protein S3 [Oryza sativa Indica Group]
Length = 108
Score = 55.0 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 21/96 (21%), Positives = 41/96 (42%), Gaps = 7/96 (7%)
Query: 137 AVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYG 194
++ M GA G +VI SG+L A+ +++ + +G + Q + +ID G
Sbjct: 2 VLRFVMESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQG 60
Query: 195 SCGIKVYVSL----RDEVSDSDSTIPAAEHRVVEKD 226
GIKV + L + +V + +++
Sbjct: 61 VLGIKVKIMLDWDPKGKVGPTTPLPDLVTIHAPKEE 96
>gi|323435099|ref|YP_004222317.1| hypothetical protein BevumaM_p082 [Beta vulgaris subsp. maritima]
gi|317905653|emb|CBX33229.1| hypothetical protein [Beta vulgaris subsp. maritima]
gi|319439832|emb|CBX33302.1| hypothetical protein [Beta vulgaris subsp. maritima]
Length = 273
Score = 54.6 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
M +K NPI RL +N + +S WF YG L+++DL +R Y+ L +
Sbjct: 1 MARKGNPISVRLDLNRSSDSSWF-NDYYYGKLVYQDLNLRSYV----GSIRPPTRLTFGS 55
Query: 61 HKNCRIIVYSAR 72
II++ +
Sbjct: 56 RPGRCIIIHCQK 67
>gi|9838466|ref|NP_064079.1| orf246 [Beta vulgaris subsp. vulgaris]
gi|9087328|dbj|BAA99472.1| orf246 [Beta vulgaris subsp. vulgaris]
Length = 246
Score = 54.6 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 34/72 (47%), Gaps = 5/72 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
M +K NPI RL +N + +S WF YG L+++DL +R Y+ L +
Sbjct: 1 MARKGNPISVRLDLNRSSDSSWF-NDYYYGKLVYQDLNLRSYV----GSIRPPTRLTFGS 55
Query: 61 HKNCRIIVYSAR 72
II++ +
Sbjct: 56 RPGRCIIIHCQK 67
>gi|223927801|gb|ACN23521.1| ribosomal protein S3 [Halimeda discoidea]
Length = 139
Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 61/139 (43%), Gaps = 11/139 (7%)
Query: 28 EYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNC-RIIVYSARPGLIIGKKGTDIEK 86
+Y + ED +R L +A I I R + I++++ +P ++IG KG ++E
Sbjct: 1 DYSKYVLEDNFVRTLLSKKYNRARFEXIQISRKIZXHLEIVIHAQKPDILIGXKGENLEI 60
Query: 87 IRKKLSNM--------TNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM--KR 136
+K++ NS++ + + ++ IA I + LE+R+ ++ +
Sbjct: 61 FQKQIXTFIFQYRQIEWNSKLKVILYIFRXKTSASSAIADFIVEHLEKRIPYKVVFTLLK 120
Query: 137 AVQSAMRFGADGVKVIASG 155
+ G+K+ SG
Sbjct: 121 KHLXRKKQSTLGMKIQISG 139
>gi|321268743|gb|ADW79192.1| ribosomal protein S3 [Cyanophora paradoxa]
Length = 214
Score = 53.8 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 8/104 (7%)
Query: 109 PEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECY 168
PE+ LI++ Q+ R +FR + +Q + G G K+ SGRL ++++RTE
Sbjct: 90 PEMINILISRYFKQRKNYRFIFRTIVY-HIQKKFKHGIMGAKINLSGRLGKSQIARTEWI 148
Query: 169 LEG-------RVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
++PL + +I Y + G+ GIK +V LR
Sbjct: 149 QSNNPFGGKTQLPLHKINTNIIYSYKTIFSKRGNIGIKTWVYLR 192
>gi|11466315|ref|NP_051143.1| ribosomal protein S3 [Cafeteria roenbergensis]
gi|6180097|gb|AAF05794.1|AF193903_17 ribosomal protein S3 [Cafeteria roenbergensis]
Length = 713
Score = 53.8 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Query: 2 GQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVA--KILIER 59
GQK+NP+ +R+G W + W+ YG +L++ L+I E +Q L + I
Sbjct: 5 GQKVNPVGWRVGFYRKWKTLWYEESWNYGLMLNKTLRINELMQSFLLYKRLPALNCNIMV 64
Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKK 90
++ + + ++ + ++K RK+
Sbjct: 65 ANQGTEKFIILVYFYNLREEETSQVKKRRKR 95
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/83 (22%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 125 ERRVVFRRAMKRAVQSAMRF--GADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHI 182
+R++ F R + R + + G+++ GR + +++ + G +PLQ A I
Sbjct: 611 KRQIPFIRFLMRLITNLAGSVVRVKGLRIQFKGRFDRWNRTKSLVFTSGNIPLQRKDADI 670
Query: 183 DYGTAVAETAYGSCGIKVYVSLR 205
+YG++ G GI+++V
Sbjct: 671 EYGSSHGLVKKGVYGIRLWVWYG 693
>gi|315139154|gb|ADT80771.1| ribosomal protein S3 [Heliothis subflexa]
gi|315139156|gb|ADT80772.1| ribosomal protein S3 [Heliothis virescens]
Length = 126
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 132 RAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDY---GTAV 188
RA ++ M GA G +V+ SG+L G + +++ +++G + + + DY T
Sbjct: 1 RACYGVLRFIMESGARGCEVVVSGKLRG-QRAKSMKFVDGLM-IHSGDPCNDYVNTATRH 58
Query: 189 AETAYGSCGIKVYVSLR 205
G GIKV + L
Sbjct: 59 VLLRQGVLGIKVKIMLP 75
>gi|169838531|ref|ZP_02871719.1| 30S ribosomal protein S3 [candidate division TM7 single-cell
isolate TM7a]
Length = 33
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/33 (66%), Positives = 26/33 (78%)
Query: 153 ASGRLNGAELSRTECYLEGRVPLQTLRAHIDYG 185
SGRLNGAE++R+E L GRVPL TLRA +DY
Sbjct: 1 VSGRLNGAEIARSEWTLSGRVPLHTLRADVDYA 33
>gi|320148732|emb|CBJ23370.1| hypothetical protein [Beta vulgaris subsp. maritima]
Length = 273
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERT 60
M +K NPI RL +N + +S WF YG L+++D+ +R Y+ L
Sbjct: 1 MARKGNPISVRLDLNRSSDSSWF-NDYYYGKLVYQDINLRSYV----GSIRPPTRLTFGF 55
Query: 61 HKNCRIIVYSAR 72
II++ +
Sbjct: 56 RPGKCIIIHCQK 67
>gi|15150731|ref|NP_150397.1| ribosomal protein S3 [Pylaiella littoralis]
gi|15147737|emb|CAC50838.1| ribosomal protein S3 [Pylaiella littoralis]
Length = 273
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/151 (23%), Positives = 60/151 (39%), Gaps = 9/151 (5%)
Query: 62 KNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIA 121
K R+ Y+ K+ T K K + + + +A A+ +
Sbjct: 122 KINRLKSYTRSVPQPARKQMTFYGKSFNKSRYDYARYGLQLMYLLLLKKASAASFARFLK 181
Query: 122 QQLERRVVFRR------AMKRAVQSAMRFGA-DGVKVIASGRLNGAE--LSRTECYLEGR 172
Q + R +R +K+A++S R+ G+K+ GR S+ + G
Sbjct: 182 QNIRSRQRRKRHYQFLGYIKKALKSLERYKKIQGLKIQIKGRFTHKAKGRSQCWKHQIGS 241
Query: 173 VPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
+PL L +I +TAYGS G+KV+V
Sbjct: 242 MPLSNLDKNIHAEYTQTQTAYGSVGVKVWVC 272
>gi|270055857|gb|ACZ59193.1| ribosomal protein S3 [Phacelia argentea]
Length = 30
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 178 LRAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
+RA IDY + T YG GIK+++ + DE
Sbjct: 1 IRAKIDYCSYTVRTIYGVLGIKIWIFIDDE 30
>gi|224034403|gb|ACN36277.1| unknown [Zea mays]
Length = 103
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIK 199
M GA G +VI SG+L A+ +++ + +G + Q + +ID G GIK
Sbjct: 1 MESGAKGCEVIVSGKLR-AQRAKSMKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIK 59
Query: 200 VYVSL----RDEVSD 210
V + L + +V
Sbjct: 60 VKIMLDWDPKGKVGP 74
>gi|270055842|gb|ACZ59183.1| ribosomal protein S3 [Phacelia rotundifolia]
Length = 29
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
RA IDY T YG GIK+++ + DE
Sbjct: 1 RAKIDYCCYTVRTIYGVLGIKIWIFIDDE 29
>gi|270055863|gb|ACZ59197.1| ribosomal protein S3 [Phacelia bolanderi]
gi|270055872|gb|ACZ59203.1| ribosomal protein S3 [Romanzoffia californica]
Length = 29
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
RA IDY + T YG GIK+++ + DE
Sbjct: 1 RAKIDYCSYTVRTIYGVLGIKIWIFIDDE 29
>gi|110816066|ref|YP_684398.1| ribosomal protein S3 [Oltmannsiellopsis viridis]
gi|86450277|gb|ABC96356.1| ribosomal protein S3 [Oltmannsiellopsis viridis]
Length = 229
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 1 MGQKINPILFRLGV-NCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQ 49
MG KI PI RL V S W +Y L+++DLK+R Y++ +
Sbjct: 1 MGHKITPISNRLSVGIRNPKSSW-VSSYDYAELINKDLKLRNYIKKLISN 49
>gi|290465606|gb|ADD25161.1| ribosomal protein S3 [Didymium iridis]
gi|290465608|gb|ADD25162.1| ribosomal protein S3 [Didymium iridis]
Length = 489
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/116 (21%), Positives = 45/116 (38%), Gaps = 1/116 (0%)
Query: 95 TNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMR-FGADGVKVIA 153
+ + + +NA + +L + + ++ R DG ++I
Sbjct: 363 NDRRLITRFYIMNNLNLNADFLLNYFMIKLGQYFSLNEILSPILRRLKRLTDLDGFRIIF 422
Query: 154 SGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVS 209
SGRL E + +PL T +A IDY + +G GIK+Y+ + V
Sbjct: 423 SGRLTRKERAAYIVRSHKSMPLSTYKAKIDYASGFKIMKFGVVGIKIYLLYTNAVP 478
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 13/19 (68%), Positives = 15/19 (78%)
Query: 1 MGQKINPILFRLGVNCTWN 19
MG KINP +FRLGV+ WN
Sbjct: 1 MGHKINPQIFRLGVSIDWN 19
>gi|149068842|gb|EDM18394.1| rCG40478, isoform CRA_d [Rattus norvegicus]
Length = 151
Score = 52.7 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIK 199
M GA G +V+ SG+L G + +++ +++G + + ++D G GIK
Sbjct: 1 MESGAKGCEVVVSGKLRG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIK 59
Query: 200 VYVSLR----DEVSDSDST 214
V + L ++
Sbjct: 60 VKIMLPWDPSGKIGPKKPL 78
>gi|256073701|ref|XP_002573167.1| 40S ribosomal protein S3 [Schistosoma mansoni]
gi|238658341|emb|CAZ29399.1| 40S ribosomal protein S3, putative [Schistosoma mansoni]
Length = 152
Score = 52.7 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/136 (19%), Positives = 61/136 (44%), Gaps = 4/136 (2%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L+ L G + + + K +I+ + + ++G+ I ++ L
Sbjct: 6 EFLKRELADDGYSASQVRESRKYTEVIILATKTQSVLGEDSLRIRELASVLQKRFGFSDC 65
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ L V+++ ++A A+S+ +L + R+A ++ + GA GV VI SG++
Sbjct: 66 ALGLFVDKMIFRGLSAIAQAESLRYKLTYGLPVRKACYGILRFIIESGARGVGVIVSGKI 125
Query: 158 NGAELSRTECYLEGRV 173
+ ++ + G +
Sbjct: 126 KD-QRAKAMKFCNGLI 140
>gi|270055851|gb|ACZ59189.1| ribosomal protein S3 [Phacelia tanacetifolia]
gi|270055854|gb|ACZ59191.1| ribosomal protein S3 [Phacelia crenulata var. crenulata]
Length = 29
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 179 RAHIDYGTAVAETAYGSCGIKVYVSLRDE 207
RA IDY + T YG GIK+++ + DE
Sbjct: 1 RAKIDYCSYTVRTIYGILGIKIWIFIDDE 29
>gi|255529371|gb|ACU12621.1| ribosomal protein S3 [Codium fragile]
gi|255529377|gb|ACU12625.1| ribosomal protein S3 [Codium fragile]
gi|255529391|gb|ACU12634.1| ribosomal protein S3 [Codium fragile]
gi|255529394|gb|ACU12636.1| ribosomal protein S3 [Codium fragile]
gi|255529397|gb|ACU12638.1| ribosomal protein S3 [Codium fragile]
Length = 30
Score = 52.3 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 177 TLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+L A+IDY A+T YG GIK+++
Sbjct: 1 SLAANIDYCCRTAKTIYGILGIKIWIFQP 29
>gi|167933147|ref|ZP_02520234.1| 30S ribosomal protein S3 [candidate division TM7 single-cell
isolate TM7b]
Length = 118
Score = 52.3 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 45/61 (73%)
Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVK 150
+ N+ N EI +++ EV KPE++A ++ +IA+Q+E +V +RRA+K A+ + MR GA+G+K
Sbjct: 1 MKNLFNKEIQINIFEVRKPELDANIVGMNIARQVEGKVAYRRAIKMAIANTMRAGAEGIK 60
Query: 151 V 151
Sbjct: 61 F 61
>gi|149068840|gb|EDM18392.1| rCG40478, isoform CRA_b [Rattus norvegicus]
Length = 117
Score = 52.3 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIK 199
M GA G +V+ SG+L G + +++ +++G + + ++D G GIK
Sbjct: 1 MESGAKGCEVVVSGKLRG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIK 59
Query: 200 VYVSLR----DEVSDSDST 214
V + L ++
Sbjct: 60 VKIMLPWDPSGKIGPKKPL 78
>gi|21104402|dbj|BAB93471.1| IMR-90 ribosomal protein S3 [Homo sapiens]
Length = 117
Score = 52.3 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 34/79 (43%), Gaps = 7/79 (8%)
Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIK 199
M GA G +V+ SG+L G + +++ +++G + + ++D G GIK
Sbjct: 1 MESGAKGCEVVVSGKLRG-QRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIK 59
Query: 200 VYVSLR----DEVSDSDST 214
V + L ++
Sbjct: 60 VKIMLPWDPTGKIGPKKPL 78
>gi|270055839|gb|ACZ59181.1| ribosomal protein S3 [Phacelia linearis]
gi|270055845|gb|ACZ59185.1| ribosomal protein S3 [Phacelia fremontii]
gi|270055866|gb|ACZ59199.1| ribosomal protein S3 [Draperia systyla]
gi|270055869|gb|ACZ59201.1| ribosomal protein S3 [Draperia systyla]
Length = 28
Score = 51.9 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLRDE 207
A IDY + T YG GIK+++ + DE
Sbjct: 1 AKIDYCSYTVRTIYGVLGIKIWIFIDDE 28
>gi|11465874|ref|NP_066423.1| ribosomal protein S3 [Ochromonas danica]
gi|10505207|gb|AAG18389.1|AF287134_14 ribosomal protein S3 [Ochromonas danica]
Length = 250
Score = 51.5 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVY 201
GVK+I +GRL G ++T ++ G++PL + + I T YG G+K++
Sbjct: 187 KHSQIKGVKLIIAGRLKGKTRAKTSKFILGKIPLSSEKEKIKASQTHIYTVYGCFGLKLW 246
Query: 202 VSLR 205
V+ +
Sbjct: 247 VNYK 250
>gi|83595153|gb|ABC25034.1| ribosomal protein S3 [Hydra vulgaris]
Length = 119
Score = 51.1 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/86 (22%), Positives = 35/86 (40%), Gaps = 8/86 (9%)
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGI 198
+ GA G +VI SG+L G + +++ + +G + ++ +ID G GI
Sbjct: 6 ILESGAKGCEVIVSGKLRG-QRAKSMKFTDGFMIHSGYPIQEYIDTAVRHVYLRQGVLGI 64
Query: 199 KVYVSLRDEVSDSDSTIPAAEHRVVE 224
KV + D T + +
Sbjct: 65 KVKIM-----LPWDPTGKTGPKKPLP 85
>gi|331240642|ref|XP_003332971.1| 40S ribosomal protein S3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309311961|gb|EFP88552.1| 40S ribosomal protein S3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 140
Score = 51.1 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 30/79 (37%), Gaps = 3/79 (3%)
Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIK 199
M A G +V+ SG+L A +++ + +G + Q +D G GIK
Sbjct: 1 MESNAKGCEVVVSGKLRAA-RAKSMKFTDGFMIHSGQPSVDFVDQAVRHVLLRQGVLGIK 59
Query: 200 VYVSLRDEVSDSDSTIPAA 218
V + ++ P
Sbjct: 60 VKIMRGNDTEGRGGAPPKP 78
>gi|255529415|gb|ACU12650.1| ribosomal protein S3 [Codium fragile]
Length = 28
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLR 205
A+IDY A+T YG GIK+++
Sbjct: 2 ANIDYCCRTAKTIYGILGIKIWIFQP 27
>gi|308802700|ref|XP_003078663.1| putative ribosomal protein (ISS) [Ostreococcus tauri]
gi|116057116|emb|CAL51543.1| putative ribosomal protein (ISS) [Ostreococcus tauri]
Length = 145
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
Query: 131 RRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAV 188
R A ++ M GA G +V+ SG+L G + ++ + +G + +R +I T
Sbjct: 31 RSACYGVLRYIMESGAKGAEVVVSGKLRG-QRAKAMKFKDGYMISSGNPVRDYIVSCTRH 89
Query: 189 AETAYGSCGIKVYVSLRDEVSDSDSTIPAAEH 220
A G+ G++V + L + D
Sbjct: 90 ALLRQGTIGMRVKIMLDHDPKGRDGPSTPIPD 121
>gi|118724801|gb|ABL10968.1| ribosomal protein S3 [Codium fragile]
Length = 27
Score = 50.0 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 180 AHIDYGTAVAETAYGSCGIKVYVSLR 205
A+IDY A+T YG GIK+++
Sbjct: 1 ANIDYCCRTAKTIYGILGIKIWIFQP 26
>gi|324105279|gb|ADY18402.1| ribosomal protein rps3 [Glycera tridactyla]
Length = 108
Score = 50.0 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/90 (17%), Positives = 36/90 (40%), Gaps = 7/90 (7%)
Query: 143 RFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKV 200
GA G +V+ SG+L G + +++ +++G + + ++D G GIKV
Sbjct: 1 ESGAKGCEVVVSGKLRG-QRAKSMKFVDGLMIHSGEPTHDYVDTAVRHVLLRQGVLGIKV 59
Query: 201 YVSLR----DEVSDSDSTIPAAEHRVVEKD 226
+ L ++ +++
Sbjct: 60 KIMLPWDPSGKIGPKHPLPDQISIVEPKEE 89
>gi|11466199|ref|NP_066522.1| ribosomal protein S3 [Naegleria gruberi]
gi|10444234|gb|AAG17800.1|AF288092_25 ribosomal protein S3 [Naegleria gruberi]
Length = 523
Score = 49.6 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
Query: 141 AMRFGADGVKVIASGRLNGAELSRTECYLE--------GRVPLQTLRAHIDYGTAVAETA 192
++ G+++ +G +R Y + G++P +++ A IDY + A T
Sbjct: 437 IKKYPLIGIRIECNGPPKRGRQARLVAYHQIVKNYKLFGKMPNKSVLADIDYYQSFARTK 496
Query: 193 YGSCGIKVYVSL 204
GS GIKV++
Sbjct: 497 QGSIGIKVWIFF 508
Score = 35.7 bits (81), Expect = 4.8, Method: Composition-based stats.
Identities = 11/133 (8%), Positives = 36/133 (27%), Gaps = 26/133 (19%)
Query: 10 FRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVY 69
R+ +W + W+ + Y L D ++ +YL+ + +
Sbjct: 10 LRIPHFNSWKTIWYEKDKNYSYLFFRDFQLFQYLKGLFYRLKMLTDDF------------ 57
Query: 70 SARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV 129
++L ++ K ++ + + ++
Sbjct: 58 --------------YFDNLTNNCFYIKVNVYLYKFQIKKYFLSFFIDQYLLYNFFLKKRK 103
Query: 130 FRRAMKRAVQSAM 142
F+ + + +
Sbjct: 104 FKHIISSSFSNTF 116
>gi|226476716|emb|CAX72250.1| ribosomal protein S3 [Schistosoma japonicum]
Length = 102
Score = 49.2 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 8/85 (9%)
Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIK 199
M GA G +VI SG++ G + ++ + +G + + ++D + G GIK
Sbjct: 1 MESGARGAEVIVSGKIKG-QRAKAMKFCDGLMIHSGDPVNYYVDKAVRHVQLPQGILGIK 59
Query: 200 VYVSLRDEVSDSDSTIPAAEHRVVE 224
V + D DS+ + +
Sbjct: 60 VKIM-----MDHDSSGKKGPRKPLP 79
>gi|95116517|gb|ABF56171.1| 40S ribosomal protein S3 [Theobroma cacao]
Length = 86
Score = 48.8 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 37/82 (45%)
Query: 77 IGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKR 136
G++ ++ + +K + + L +V + A A+S+ +L + RRA
Sbjct: 5 KGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACYG 64
Query: 137 AVQSAMRFGADGVKVIASGRLN 158
++ M GA G +V+ SG L
Sbjct: 65 VLRFIMESGAKGCEVMVSGXLR 86
>gi|268053583|ref|YP_003288941.1| ribosomal protein S3 [Saccharina religiosa]
gi|262318203|dbj|BAI48527.1| ribosomal protein S3 [Saccharina religiosa]
Length = 281
Score = 48.5 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 31/153 (20%), Positives = 60/153 (39%), Gaps = 9/153 (5%)
Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
T + R+ Y ++ K + + + K + +AT +A+
Sbjct: 120 TLRINRVKTYMRSVPKPARRQMAYFTKSFNHIRYDYARYGMQLMYLLIKNKASATSLARF 179
Query: 120 IAQQLERRVVFRR------AMKRAVQSAMRFG-ADGVKVIASGRLNGAE--LSRTECYLE 170
+ Q + R +R +K+ Q+ + G+K+ GR SR Y
Sbjct: 180 LKQNICSRQRRKRHYQFLAYIKQGFQTLQEYKEIQGLKIQIKGRFTHKAKGRSRVWKYQM 239
Query: 171 GRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
G++P+ L +I A +T YGS G+K+++
Sbjct: 240 GQMPISQLSKNIQAEYAQTQTGYGSVGLKIWIC 272
>gi|268053544|ref|YP_003288903.1| ribosomal protein S3 [Saccharina japonica]
gi|268053622|ref|YP_003288979.1| ribosomal protein S3 [Saccharina ochotensis]
gi|268053661|ref|YP_003289056.1| ribosomal protein S3 [Saccharina diabolica]
gi|268053700|ref|YP_003289107.1| ribosomal protein S3 [Saccharina longipedalis]
gi|262318164|dbj|BAI48489.1| ribosomal protein S3 [Saccharina japonica]
gi|262318242|dbj|BAI48565.1| ribosomal protein S3 [Saccharina ochotensis]
gi|262318281|dbj|BAI48603.1| ribosomal protein S3 [Saccharina diabolica]
gi|262318320|dbj|BAI48641.1| ribosomal protein S3 [Saccharina longipedalis]
Length = 281
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 31/153 (20%), Positives = 60/153 (39%), Gaps = 9/153 (5%)
Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
T + R+ Y ++ K + + + K + +AT +A+
Sbjct: 120 TLRINRVKTYMRSVPKPARRQMAYFTKSFNHIRYDYARYGMQLMYLLIKNKASATSLARF 179
Query: 120 IAQQLERRVVFRR------AMKRAVQSAMRFG-ADGVKVIASGRLNGAE--LSRTECYLE 170
+ Q + R +R +K+ Q+ + G+K+ GR SR Y
Sbjct: 180 LKQNICSRQRRKRHYQFLAYIKQGFQALQEYKEIQGLKIQIKGRFTHKAKGRSRVWKYQM 239
Query: 171 GRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
G++P+ L +I A +T YGS G+K+++
Sbjct: 240 GQMPISQLSKNIQAEYAQTQTGYGSVGLKIWIC 272
>gi|319738233|emb|CBJ18009.1| ribosomal protein S3 [Ectocarpus siliculosus]
Length = 273
Score = 48.1 bits (113), Expect = 9e-04, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Query: 125 ERRVVFRRAMKRAVQSAMRFG-ADGVKVIASGRLNGAE--LSRTECYLEGRVPLQTLRAH 181
+R F +K+A+++ + G K+ GR SR+ + G +PL L +
Sbjct: 191 KRHYQFLGYIKQALKALEPYKEIQGFKIQIKGRFTHKAKGRSRSWKHQIGSMPLSQLDKN 250
Query: 182 IDYGTAVAETAYGSCGIKVYVSL 204
I A +TAYGS G+K+++
Sbjct: 251 IQAQYAQTQTAYGSVGLKIWICK 273
>gi|158187818|gb|ABW23198.1| ribosomal protein rps3 [Eurythoe complanata]
Length = 105
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 14/73 (19%), Positives = 31/73 (42%), Gaps = 7/73 (9%)
Query: 148 GVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
G +V+ SG+L G + +++ +++G + + ++D G GIKV + L
Sbjct: 1 GCEVVVSGKLRG-QRAKSMKFVDGLMIHSGEPTNDYVDTAVRHVLLRQGVLGIKVKIMLP 59
Query: 206 ----DEVSDSDST 214
++
Sbjct: 60 WDPAGKIGPKRPL 72
>gi|118724978|gb|ABL11086.1| ribosomal protein S3 [Codium yezoense]
Length = 27
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 182 IDYGTAVAETAYGSCGIKVYVSLR 205
IDY A+T YG GIK+++
Sbjct: 1 IDYCCRTAKTIYGILGIKIWIFQP 24
>gi|7524996|ref|NP_050094.1| ORF1740 [Dictyostelium discoideum]
gi|1088430|dbj|BAA04740.1| unnamed protein product [Dictyostelium discoideum]
gi|4958899|dbj|BAA78076.1| ORF1740 [Dictyostelium discoideum]
Length = 1740
Score = 47.3 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 30/174 (17%), Positives = 69/174 (39%), Gaps = 20/174 (11%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
KI+E ++ L + K I++ + +Y + + L N+
Sbjct: 1566 KIKELIKIFLYPLLITKRQIQKVRLRKKNKIY--------------LLMAQIFLYNIKQL 1611
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRR------AMKRAVQSAMRFGADGVKV 151
+ ++ + I +++ A+ + ++L+ R+ + +K + G KV
Sbjct: 1612 VVSVNYSINFFGIIGSSITAEYVVRRLKERLELTKRNGSALLLKVMAKLMRSQHVVGCKV 1671
Query: 152 IASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
SGRL G +++ + G + + +IDY +G CG+K+++
Sbjct: 1672 KYSGRLTGNSMAQQKVESRGLIGNSNMNVYIDYAQDNLVRKHGKCGLKLWIVRN 1725
>gi|149068846|gb|EDM18398.1| rCG40478, isoform CRA_h [Rattus norvegicus]
Length = 151
Score = 47.3 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 20/100 (20%), Positives = 42/100 (42%), Gaps = 3/100 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 23 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFPEG 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRA 137
+ L +V + A A+S+ +L + RR ++
Sbjct: 83 SVELYAEKVATRGLCAIAQAESLRYKLLGGLAVRRVGSQS 122
>gi|58578648|ref|YP_203368.1| ribosomal protein S3 [Mortierella verticillata]
gi|57545581|gb|AAW51705.1| ribosomal protein S3 [Mortierella verticillata]
Length = 283
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 48/259 (18%), Positives = 85/259 (32%), Gaps = 57/259 (22%)
Query: 1 MGQKINPILFRLGVNCTW--NSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIE 58
MG K +P+ RL + W S +F SE D ++ + + A ++K
Sbjct: 1 MGSK-HPLSLRLKTHNKWGETSYYFNSKSELHNYWGVDKIALNVIKHYFQFALISKPKFN 59
Query: 59 RTHKNCRIIVYSA------RPGLIIGKKGT----------------------DIEKIRKK 90
+ I Y + G+ K+ K
Sbjct: 60 KDSNKIVISFYYFLNLPVSKRFNPYGQSKRIQSSLQGDVTANNKNLLPLEAKGYSKLILK 119
Query: 91 LSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLE-------RRVVFRRA---------- 133
LS + L + P +N+ ++AQ IA + R +F++A
Sbjct: 120 LSRFYGKPVELRPVRIHYPYLNSYILAQYIAINIRLGNFNKLMRTLFKKAKLVRNNNINT 179
Query: 134 ------MKRAVQSAMRFGADGVKVIASGRL---NGAELSRTECYLEGRVPLQTLRAHIDY 184
+K + G+K+ SGRL A +R G + L + + ID
Sbjct: 180 TNFRDLIKYSSLINRPQFLSGLKIQISGRLSQRKAASRTRIVRKSIGTLRLSSSTSLIDA 239
Query: 185 GTAVAETAYGSCGIKVYVS 203
+ G+ +KV++S
Sbjct: 240 SKFSFKGKNGAATVKVWLS 258
>gi|118724807|gb|ABL10972.1| ribosomal protein S3 [Codium fragile]
gi|118724810|gb|ABL10974.1| ribosomal protein S3 [Codium fragile]
Length = 25
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 182 IDYGTAVAETAYGSCGIKVYVSLR 205
IDY A+T YG GIK+++
Sbjct: 1 IDYCCRTAKTIYGILGIKIWIFQP 24
>gi|226508400|ref|NP_001142180.1| hypothetical protein LOC100274348 [Zea mays]
gi|194707500|gb|ACF87834.1| unknown [Zea mays]
Length = 133
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 41/95 (43%), Gaps = 3/95 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E L L + G + + + T II+ + R ++G+KG I ++ + N +
Sbjct: 23 EMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPEN 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRR 132
+ L +V + A A+S+ +L + RR
Sbjct: 83 GVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRR 117
>gi|224121646|ref|XP_002318635.1| predicted protein [Populus trichocarpa]
gi|222859308|gb|EEE96855.1| predicted protein [Populus trichocarpa]
Length = 178
Score = 46.5 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 10/112 (8%)
Query: 24 ARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTD 83
A G Y L E L L + G + + + T II+ + R ++G+KG
Sbjct: 13 ADGVFYAEL-------NEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRR 65
Query: 84 IEKIR---KKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRR 132
I ++ +K + + L +V + A A+S+ +L + RR
Sbjct: 66 IRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRR 117
>gi|268164088|ref|YP_003288865.1| ribosomal protein S3 [Saccharina coriacea]
gi|262318398|dbj|BAI48717.1| ribosomal protein S3 [Saccharina coriacea]
Length = 281
Score = 46.5 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 125 ERRVVFRRAMKRAVQSAMRFG-ADGVKVIASGRLNGAE--LSRTECYLEGRVPLQTLRAH 181
+R F +K+ Q+ + G+K+ GR SR Y G++P+ L +
Sbjct: 191 KRHYQFLAYIKQGFQALQEYKEIQGLKIQIKGRFTHKAKGRSRVWKYQMGQMPISQLNKN 250
Query: 182 IDYGTAVAETAYGSCGIKVYVS 203
I A +T YGS G+K+++
Sbjct: 251 IQAEYAQTQTGYGSVGLKIWIC 272
>gi|268164049|ref|YP_003288814.1| ribosomal protein S3 [Saccharina angustata]
gi|262318359|dbj|BAI48679.1| ribosomal protein S3 [Saccharina angustata]
Length = 281
Score = 46.5 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
Query: 125 ERRVVFRRAMKRAVQSAMRFG-ADGVKVIASGRLNGAE--LSRTECYLEGRVPLQTLRAH 181
+R F +K+ Q+ + G+K+ GR SR Y G++P+ L +
Sbjct: 191 KRHYQFLAYIKQGFQALQEYKEIQGLKIQIKGRFTHKAKGRSRVWKYQMGQMPISQLNKN 250
Query: 182 IDYGTAVAETAYGSCGIKVYVS 203
I A +T YGS G+K+++
Sbjct: 251 IQAEYAQTQTGYGSVGLKIWIC 272
>gi|60117123|ref|YP_209586.1| ribosomal protein S3 [Polysphondylium pallidum]
gi|51339687|gb|AAU00601.1| ribosomal protein S3 [Polysphondylium pallidum]
Length = 660
Score = 46.1 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 23/100 (23%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Query: 111 INATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGAD-----GVKVIASGRLNGAELSRT 165
I + A + +++ R + +++K + + +R G KV +GRL+ + ++R
Sbjct: 526 IEENINADMLLKRILRTMDITKSLKWLILNMLRKLEKSMSFFGFKVKFAGRLSASIMARV 585
Query: 166 ECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+ +G + + +IDY YG CGIKV++
Sbjct: 586 DIIQKGLISTNNMNVYIDYAKDSIVLKYGKCGIKVWLVRN 625
>gi|118724756|gb|ABL10938.1| ribosomal protein S3 [Codium cylindricum]
gi|118724759|gb|ABL10940.1| ribosomal protein S3 [Codium cylindricum]
Length = 37
Score = 46.1 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 182 IDYGTAVAETAYGSCGIKVYVSLRDE 207
IDY A+T YG GIK+++ +
Sbjct: 1 IDYCCRTAKTIYGILGIKIWIFQPNI 26
>gi|84508528|ref|YP_448692.1| ribosomal protein S3 [Dictyota dichotoma]
gi|45925696|gb|AAS79077.1| ribosomal protein S3 [Dictyota dichotoma]
Length = 277
Score = 46.1 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Query: 125 ERRVVFRRAMKRAVQSA-MRFGADGVKVIASGRL--NGAELSRTECYLEGRVPLQTLRAH 181
++ F R +K+ ++ + G+K+ GR S+ Y G +PL +RA
Sbjct: 194 KKHTDFTRFLKQGIEIFDSKKKIKGIKIQLKGRFGYKPKGRSKIWKYQLGSLPLSQIRAV 253
Query: 182 IDYGTAVAETAYGSCGIKVYVSLR 205
I Y + A+T GS GIK ++
Sbjct: 254 IQYRSQQAQTKLGSVGIKTWIYYN 277
>gi|160688754|gb|ABX45170.1| ribosomal protein S3 [Polysphondylium pallidum]
Length = 639
Score = 46.1 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 32/167 (19%), Positives = 67/167 (40%), Gaps = 9/167 (5%)
Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE 98
I+ ++ + V K + R ++ +I+ I ++ E
Sbjct: 462 IKNLIKFLIIPTAVDKKNLNRKKFKRSNKIFYIFSQIILYNMKQLITARNYTINFFGVIE 521
Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLN 158
+++ + + K + I +S+ + M R ++ +M F G KV +GRL+
Sbjct: 522 ENINADILLKRILLTMDITKSLKWLILN-------MVRKLEKSMSFF--GFKVRFAGRLS 572
Query: 159 GAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
+ ++R + +G + + +IDY YG CGIKV++
Sbjct: 573 SSIMARVDVIQKGLISTNNMNVYIDYAKDSIVFKYGKCGIKVWLVRN 619
>gi|223947579|gb|ACN27873.1| unknown [Zea mays]
Length = 127
Score = 46.1 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 21/95 (22%), Positives = 41/95 (43%), Gaps = 3/95 (3%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---S 97
E L L + G + + + T II+ + R ++G+KG I ++ + N +
Sbjct: 23 EMLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLGEKGRRIRELTSVVQKRFNFPEN 82
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRR 132
+ L +V + A A+S+ +L + RR
Sbjct: 83 GVELYAEKVVNRGLCAIAQAESLRYKLLGGLAVRR 117
>gi|119598703|gb|EAW78297.1| hCG2022018 [Homo sapiens]
Length = 117
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 34/85 (40%), Gaps = 8/85 (9%)
Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIK 199
M GA G KV+ASG+L G + +++ +++G + ++ G GIK
Sbjct: 1 MESGAKGCKVMASGKLRG-QRAKSMKFVDGLTIHSGDPINYYVGTAVCHVLLRQGVLGIK 59
Query: 200 VYVSLRDEVSDSDSTIPAAEHRVVE 224
V + D T + +
Sbjct: 60 VKIM-----LPWDPTGKTGPKKPLP 79
>gi|84508566|ref|YP_448614.1| ribosomal protein S3 [Fucus vesiculosus]
gi|39653289|gb|AAR29308.1| ribosomal protein S3 [Fucus vesiculosus]
Length = 273
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Query: 125 ERRVVFRRAMKRAVQSAMRFGA-DGVKVIASGRLNGAE--LSRTECYLEGRVPLQTLRAH 181
+R F R +K++ Q+ ++ G+K+ GR SR Y G++PL L +
Sbjct: 191 KRHYEFLRYLKQSFQALQKYKKIQGLKIQIKGRFTHKAKGRSRVWKYQIGQMPLSKLSSK 250
Query: 182 IDYGTAVAETAYGSCGIKVYVS 203
I +T YG G+K+++
Sbjct: 251 IQARYKQTQTGYGGVGLKIWIC 272
>gi|11467603|ref|NP_043749.1| ribosomal protein S3 [Allomyces macrogynus]
gi|1236433|gb|AAC49250.1| ribosomal protein S3 [Allomyces macrogynus]
Length = 241
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 17/72 (23%), Positives = 32/72 (44%)
Query: 134 MKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAY 193
MK R G+++ G +S+ G + + + ID+G A + TA
Sbjct: 159 MKNPEILDSRHVITGIRIEIKGITGKMTMSKKVIKTFGTLRFNSSDSIIDFGEASSMTAR 218
Query: 194 GSCGIKVYVSLR 205
G G+KV+++ +
Sbjct: 219 GIIGVKVWIAYK 230
>gi|292559452|ref|YP_003540820.1| ribosomal protein S3 [Hartmannella vermiformis]
gi|290775705|gb|ADD62204.1| ribosomal protein S3 [Hartmannella vermiformis]
Length = 346
Score = 45.0 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 51/129 (39%), Gaps = 5/129 (3%)
Query: 81 GTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM---KRA 137
I ++ L ++ + + + + + I++ +A++L ++ + M ++
Sbjct: 206 NHLISSLKNNLFSLVGIKPSVVIFGCENKNVTSAFISRFLARKLAQKYKWAELMSSLRKE 265
Query: 138 VQSAMR--FGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGS 195
+ G K+ GR S + GRV T+ A IDY ++ GS
Sbjct: 266 LNYMTDTEKFLYGYKIQFHGRFTRRSRSESVSTGYGRVSTSTVSALIDYASSSLTLRNGS 325
Query: 196 CGIKVYVSL 204
+KV++
Sbjct: 326 GSVKVWLYR 334
Score = 36.5 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 43/140 (30%), Gaps = 18/140 (12%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGS-----EYGALLHEDLKIREYLQCHLKQAGVAKI 55
MG +NP+ RL + TW W A Y + I+ YL + V
Sbjct: 1 MGHLVNPVGVRLNYSLTWADSWNATNRVHYFNHYSNSIL----IKTYLHYFFSREYVENY 56
Query: 56 LIERTHKN---------CRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEV 106
I +H + + +Y R I + K+L + + L+ V
Sbjct: 57 GIFFSHFSIFWNSNRFLIEVNLYDGRVEDWIETCVNLFSQDLKRLISYSLRSFRLNSKNV 116
Query: 107 PKPEINATLIAQSIAQQLER 126
+ + L +
Sbjct: 117 EFARSIDHTFFRFVVSLLLK 136
>gi|301500903|ref|YP_003795315.1| ribosomal protein S3 [Chromera velia]
gi|300069449|gb|ADJ66557.1| ribosomal protein S3 [Chromera velia]
Length = 1024
Score = 45.0 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 41/230 (17%), Positives = 72/230 (31%), Gaps = 36/230 (15%)
Query: 7 PILFRLGVN--CTWNSRWFARGSEYGALLHEDLKIREY-LQCHLKQAGVAKILIERTHKN 63
P+ FR+ R F R Y A L +R++ + ++L + +
Sbjct: 789 PLAFRMPTTLVQYKMKRRFKRRYFYKARLKARENVRKFRINTPSLNFRTIQLLDQHFWEY 848
Query: 64 CRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVN---------EVPKPEINAT 114
+ + P L R + S + I + +
Sbjct: 849 IMLNMNQIGPKLETWAVKLRGTLARTQWSRIIRRFIQWKFYMEYKFKTNIFIKISHLKTK 908
Query: 115 LIA-------QSIAQQLERRVVFRRA----------MKRAVQSAMRFGADGVK---VIAS 154
+ + L R+ +RR +RA +A G + + S
Sbjct: 909 MSFLHPVAINHEVGFTLRNRMSYRRVGRELQIQVNEQRRAYNAAAGVGLAIMSDILIKIS 968
Query: 155 GRL-NGAELSRTECYL---EGRVPLQTLRAHIDYGTAVAETAYGSCGIKV 200
GRL A+ S+ +G +P TL I Y + +T G G+KV
Sbjct: 969 GRLSKKADRSKLTKLAVGFKGNIPKNTLTDQIGYASLPWKTKQGILGVKV 1018
>gi|71025934|ref|XP_762674.1| ribosomal protein S3 [Theileria parva strain Muguga]
gi|68349623|gb|EAN30391.1| ribosomal protein S3, putative [Theileria parva]
Length = 232
Score = 44.6 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 31/188 (16%), Positives = 66/188 (35%), Gaps = 18/188 (9%)
Query: 25 RGSEYGALLHEDLKIREYLQCHLKQAGVAKIL-IERTHKNCRIIVYSARPGLIIGKKGTD 83
+ + L Y+ + I I K + +++ + I K
Sbjct: 55 KYKNFSNKLL-------YINSNYYDFFSVHISLIFYNLKKNKALLFLYK---NIIKLSNY 104
Query: 84 IEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFR-RAMK------R 136
I K +N + + + ++ + N + SI +E+ F+ R + +
Sbjct: 105 INYFIKFNLYASNYFVFIHMKKLKYYKNNIYYVITSIKNFIEKNKNFKVRIIYFINSLFK 164
Query: 137 AVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196
+ + + G K + SG L ++ Y G L + +++ Y +T G
Sbjct: 165 SDKYNRKINIIGAKCLYSGCLYKNSKKKSFKYARGNTSLSFVMSNVVYAKKSVKTDNGMV 224
Query: 197 GIKVYVSL 204
GIKV++
Sbjct: 225 GIKVWLYR 232
>gi|118724933|gb|ABL11056.1| ribosomal protein S3 [Codium setchellii]
Length = 27
Score = 43.4 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 182 IDYGTAVAETAYGSCGIKVYVSLR 205
IDY A+T YG GIK+++ +
Sbjct: 1 IDYSFQTAKTIYGILGIKIWIFQK 24
>gi|22759729|dbj|BAC10913.1| putative ribosomal protein S3 [Zinnia elegans]
Length = 143
Score = 43.4 bits (101), Expect = 0.026, Method: Composition-based stats.
Identities = 11/47 (23%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Query: 160 AELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
A+ +++ + +G + Q ++ +ID G GIKV + L
Sbjct: 1 AQRAKSMKFKDGYMVSSGQPVKEYIDSAVRHVLLRQGVLGIKVKIML 47
>gi|302829833|ref|XP_002946483.1| hypothetical protein VOLCADRAFT_86826 [Volvox carteri f.
nagariensis]
gi|300268229|gb|EFJ52410.1| hypothetical protein VOLCADRAFT_86826 [Volvox carteri f.
nagariensis]
Length = 167
Score = 43.1 bits (100), Expect = 0.026, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 47/135 (34%), Gaps = 9/135 (6%)
Query: 1 MGQKINP-ILFRLGVNCTWNSRWFARGSEYGALLHEDLKIREYLQCHLKQAGVAKILIER 59
MG+ I P I RL VN ++S WF Y +L D + + + +++A + +
Sbjct: 1 MGKHILPAIANRLRVNRGFDSAWFTGPQHYAKMLQRDWLLTKNVWSFVQRASRSAPRTNK 60
Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVP--------KPEI 111
+ KK ++ ++ N + + P
Sbjct: 61 EDPAALAAQAADPSRPRYPKKPQPRQQDAREFPNFRPARVFTQHMPYKSIVSAFAYHPPK 120
Query: 112 NATLIAQSIAQQLER 126
+++ A+ Q ER
Sbjct: 121 DSSPQAKYGLFQAER 135
>gi|114590697|ref|XP_001140270.1| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes]
gi|114590699|ref|XP_001140356.1| PREDICTED: hypothetical protein isoform 3 [Pan troglodytes]
gi|114590701|ref|XP_001140517.1| PREDICTED: hypothetical protein isoform 5 [Pan troglodytes]
gi|114590703|ref|XP_001140601.1| PREDICTED: hypothetical protein isoform 6 [Pan troglodytes]
Length = 117
Score = 43.1 bits (100), Expect = 0.026, Method: Composition-based stats.
Identities = 19/85 (22%), Positives = 34/85 (40%), Gaps = 8/85 (9%)
Query: 142 MRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIK 199
M GA G KV+ASG+L G + +++ +++G + + ++ G GIK
Sbjct: 1 MESGAKGCKVVASGKLRG-QRAKSMKFVDGLMIHSGDPINYYVGTAVCHVLLRQGVLGIK 59
Query: 200 VYVSLRDEVSDSDSTIPAAEHRVVE 224
V D T + +
Sbjct: 60 VKFM-----LPWDPTGKTGPKKPLP 79
>gi|294662992|ref|YP_492621.2| ribosomal protein S3 [Dictyostelium citrinum]
gi|187479917|gb|ACD12717.1| ribosomal protein S3 [Dictyostelium citrinum]
Length = 1775
Score = 43.1 bits (100), Expect = 0.032, Method: Composition-based stats.
Identities = 23/168 (13%), Positives = 60/168 (35%), Gaps = 8/168 (4%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
KI+E ++ L + K I++ + +Y + + + + ++ +
Sbjct: 1599 KIKEIIKIFLYPLLINKRQIQKVRLRKKNKIYLLMAQIFLYNVKQLVTSVNYSINFFGIT 1658
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
++ V + + K+ ++S G K+ SGR+
Sbjct: 1659 GSSITAEYVLRRLRERLMTCHKH-----GGWFLTSIQKKLMRS---KHVVGFKLKFSGRI 1710
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
G +++ +G + + +ID+ +G CG+K+++
Sbjct: 1711 TGNSMAQKNIIKKGIIGNSNMNVYIDFAQDNIVRKHGKCGLKLWIVRN 1758
>gi|118724741|gb|ABL10928.1| ribosomal protein S3 [Codium contractum]
gi|118724744|gb|ABL10930.1| ribosomal protein S3 [Codium contractum]
gi|118724831|gb|ABL10988.1| ribosomal protein S3 [Codium geppiorum]
gi|118724852|gb|ABL11002.1| ribosomal protein S3 [Codium intricatum]
gi|118724855|gb|ABL11004.1| ribosomal protein S3 [Codium intricatum]
gi|118724873|gb|ABL11016.1| ribosomal protein S3 [Codium latum]
gi|118724876|gb|ABL11018.1| ribosomal protein S3 [Codium cf. latum C51]
gi|118724930|gb|ABL11054.1| ribosomal protein S3 [Codium saccatum]
gi|118724948|gb|ABL11066.1| ribosomal protein S3 [Codium subtubulosum]
gi|118724951|gb|ABL11068.1| ribosomal protein S3 [Codium subtubulosum]
Length = 25
Score = 42.7 bits (99), Expect = 0.041, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 182 IDYGTAVAETAYGSCGIKVYVSLR 205
IDY A+T YG GIK+++ +
Sbjct: 1 IDYTFRTAKTIYGILGIKIWIFQK 24
>gi|84508606|ref|YP_448653.1| ribosomal protein S3 [Desmarestia viridis]
gi|45925638|gb|AAS79039.1| ribosomal protein S3 [Desmarestia viridis]
Length = 286
Score = 42.3 bits (98), Expect = 0.055, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 61/153 (39%), Gaps = 9/153 (5%)
Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
T + R+ Y+ K+ + + ++ V K + +AT +++
Sbjct: 120 TIRINRLKTYTRSIPKSARKQMAYYARSAHQAKYDYARTGMQLLSLVIKNKASATSLSRF 179
Query: 120 IAQQLERRVVFRR------AMKRAVQSAMRFGA-DGVKVIASGRLNGAE--LSRTECYLE 170
I Q + R +R +K+A + ++ GVK+ GR S+ Y
Sbjct: 180 IIQNISSRQRRKRHYEFLGYLKQAFTALQKYKKIQGVKIQIKGRFTHKAKGRSKVWKYQM 239
Query: 171 GRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVS 203
G++PL + I +T YGS G+KV++
Sbjct: 240 GQMPLSQISMPIQAEYMQTQTGYGSVGLKVWIC 272
>gi|118724717|gb|ABL10912.1| ribosomal protein S3 [Codium barbatum]
gi|118724720|gb|ABL10914.1| ribosomal protein S3 [Codium barbatum]
Length = 25
Score = 42.3 bits (98), Expect = 0.056, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 182 IDYGTAVAETAYGSCGIKVYVSLR 205
IDY A+T YG GIK+++ +
Sbjct: 1 IDYTFQTAKTIYGILGIKIWIFQK 24
>gi|23464612|ref|NP_696980.1| Orf269 [Monosiga brevicollis ATCC 50154]
gi|23344075|gb|AAN28351.1| Orf269 [Monosiga brevicollis]
Length = 269
Score = 42.3 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR--GSEYGA----LLHEDLKIREYLQCHLKQAGVAK 54
M +KINP FRLG W S + Y LLH DL IR+Y++ K +
Sbjct: 1 MAKKINPNRFRLGSKFLWWSISYLNLQNKGYRKIGRELLHNDLLIRKYIENVNKSFNILT 60
Query: 55 ILIERTHK 62
I + K
Sbjct: 61 SDIVISRK 68
>gi|118724768|gb|ABL10946.1| ribosomal protein S3 [Codium cf. dimorphum C29]
gi|118724771|gb|ABL10948.1| ribosomal protein S3 [Codium cf. dimorphum C77]
Length = 25
Score = 41.9 bits (97), Expect = 0.065, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 182 IDYGTAVAETAYGSCGIKVYVSLR 205
IDY A+T YG GIK+++ +
Sbjct: 1 IDYTFKTAKTIYGVLGIKIWIFQK 24
>gi|187764095|ref|YP_001876544.1| ribosomal protein S3 [Dictyostelium fasciculatum]
gi|160688803|gb|ABX45218.1| ribosomal protein S3 [Dictyostelium fasciculatum]
Length = 983
Score = 41.9 bits (97), Expect = 0.071, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 10/104 (9%)
Query: 110 EINATLIAQSIAQQLERRVVFRR--------AMKRAVQSAMRFGADGVKVIASGRLNGAE 161
I+ + A+++ ++L +R+ RR M+R ++ + G KV +GRL+ +
Sbjct: 865 MISENITAETLLRRLVQRMDIRRRKYIKIAIGMRRKLERSK--NFLGFKVKFAGRLSPSI 922
Query: 162 LSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
++ +G + L ++DY YG CGIKV+++
Sbjct: 923 MASQTIIQKGIIGTGRLNVYLDYAQGSVMFKYGKCGIKVWLARN 966
>gi|187764094|ref|YP_001876543.1| Mp26-like protein [Dictyostelium fasciculatum]
gi|160688802|gb|ABX45217.1| Mp26-like protein [Dictyostelium fasciculatum]
Length = 843
Score = 41.5 bits (96), Expect = 0.083, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYG-ALLHEDLKIREYLQCHLKQAGVAKI 55
MG +NPIL R+GV W S ++R + + ED I Y++ K+
Sbjct: 1 MGHVVNPILLRIGVVNPWISASYSRKNNKRVKYIIEDFLIYNYIRNFFFNKVYLKV 56
>gi|159478230|ref|XP_001697207.1| hypothetical protein CHLREDRAFT_192429 [Chlamydomonas
reinhardtii]
gi|158274681|gb|EDP00462.1| predicted protein [Chlamydomonas reinhardtii]
Length = 130
Score = 41.5 bits (96), Expect = 0.091, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 8 ILFRLGVNCTWNSRWFARGSEYGALLHEDLKIRE 41
I RL +N ++S WFA +Y +L D ++ +
Sbjct: 9 IANRLRLNRGFDSAWFAEPGQYAKMLQRDWQVTK 42
>gi|255569250|ref|XP_002525593.1| chloroplast 30S ribosomal protein S7, putative [Ricinus communis]
gi|223535114|gb|EEF36795.1| chloroplast 30S ribosomal protein S7, putative [Ricinus communis]
Length = 89
Score = 41.1 bits (95), Expect = 0.099, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 24/43 (55%)
Query: 134 MKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQ 176
M++A++ G++V +GRL+G E++R E +GR
Sbjct: 1 MRKAIELTEHADTKGIQVQIAGRLDGKEIARVEWIRKGRTKNN 43
>gi|65051|emb|CAA24702.1| ribosomal protein S1 [Xenopus laevis]
Length = 125
Score = 41.1 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 8/67 (11%), Positives = 22/67 (32%), Gaps = 7/67 (10%)
Query: 160 AELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRDEVSDSDSTIPA 217
+++ +++G + + ++D G GIKV + D +
Sbjct: 17 KPRAKSMKFVDGLMIHSGDPVNYYVDTAVRHVLLRQGVLGIKVKIM-----LPKDPSGKI 71
Query: 218 AEHRVVE 224
+ +
Sbjct: 72 GPKKPLP 78
>gi|209892899|ref|YP_002290872.1| rps3 [Babesia bovis T2Bo]
gi|154795908|gb|EDO05092.1| rps3 [Babesia bovis]
Length = 237
Score = 41.1 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 60/188 (31%), Gaps = 12/188 (6%)
Query: 29 YGALLHEDLKIREYLQCHLKQAGVAK-----ILIERTHKNCRIIVYSARPGLIIGKKGTD 83
Y L + R++L + K + + + L +
Sbjct: 50 YKKTLKKIRINRKFLYFTCSYTDINNICLNICFYGLFGKKHKSSIIPSYMALYKFTSYLN 109
Query: 84 IEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMR 143
N I + + V N I S+ + + + +
Sbjct: 110 YFLHHNLNVYNRNLFIWVLIPCVVNTGRNKFYIMNSLKYCILKNTNHYSKIISLCNKILT 169
Query: 144 FGAD------GVKVIASGRL-NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSC 196
+ G+KV SG G E RT Y +G V + +++ +I+Y + T G+
Sbjct: 170 YKFKNRISIHGIKVKYSGCTHKGGEKKRTFAYSKGDVSICSVKENIEYINSSINTYKGTI 229
Query: 197 GIKVYVSL 204
GIK ++ L
Sbjct: 230 GIKCWLVL 237
>gi|118724840|gb|ABL10994.1| ribosomal protein S3 [Codium hubbsii]
Length = 25
Score = 40.0 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 182 IDYGTAVAETAYGSCGIKVYVSLR 205
IDY +A+T YG GIK+++ +
Sbjct: 1 IDYTFHIAKTIYGILGIKIWIFQK 24
>gi|118724735|gb|ABL10924.1| ribosomal protein S3 [Codium capitulatum]
gi|118724738|gb|ABL10926.1| ribosomal protein S3 [Codium capitulatum]
gi|118724843|gb|ABL10996.1| ribosomal protein S3 [Codium hubbsii]
gi|118724939|gb|ABL11060.1| ribosomal protein S3 [Codium spongiosum]
gi|118724942|gb|ABL11062.1| ribosomal protein S3 [Codium spongiosum]
Length = 25
Score = 40.0 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 182 IDYGTAVAETAYGSCGIKVYVSLR 205
IDY +A+T YG GIK+++ +
Sbjct: 1 IDYTFQIAKTIYGILGIKIWIFQK 24
>gi|298243655|ref|ZP_06967462.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM
44963]
gi|297556709|gb|EFH90573.1| acyl-CoA dehydrogenase domain protein [Ktedonobacter racemifer DSM
44963]
Length = 596
Score = 40.0 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 34/190 (17%), Positives = 60/190 (31%), Gaps = 21/190 (11%)
Query: 25 RGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDI 84
+G LHE I++ L + A+ + RT N +S K +
Sbjct: 291 ERKAFGKFLHEFGMIKKKLARMAAETYAAESEVFRTAANISNAQHSGGDNTDAIFKAVED 350
Query: 85 EKIRKKLSNMTNSEI----------------HLSVNEVPKPEINATLI-----AQSIAQQ 123
I L+ + SE+ + + K +A + I +
Sbjct: 351 YAIEASLAKVHGSEVLAMVVDEGVQIFGGYGFMKEYPIEKAYRDARIQRIFEGTNEINRM 410
Query: 124 LERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHID 183
+ +FRRAMK V + ++ A+ NGA+ + E L+ +
Sbjct: 411 VASGTLFRRAMKGQVSLMTIYPQVEGRIKANEPSNGADENVPAELREAVNTLERSKDATI 470
Query: 184 YGTAVAETAY 193
Y Y
Sbjct: 471 YAAVNVAMKY 480
>gi|198422965|ref|XP_002129932.1| PREDICTED: similar to PRP4 pre-mRNA processing factor 4 homolog
[Ciona intestinalis]
Length = 512
Score = 39.6 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 25/140 (17%), Positives = 49/140 (35%), Gaps = 9/140 (6%)
Query: 49 QAGVAKILIERTHKNCRIIVYSAR------PGLIIGKKGTDIEKIRKKLSNMTNSEIHLS 102
+ G + I+ K I + I K+ +I ++ + ++
Sbjct: 31 KVGSKQEAIDMGIKAGNINISDPSETMEMTMEERINKRQAEILAEFERKKKIRQIQVTTD 90
Query: 103 VNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGAEL 162
+E+ K L + R R ++ ++ + +A+ R A+L
Sbjct: 91 DDEIKKLLRERNLPVTLFGEGPADR---RERLRESIAEIGPIKNKNAEEMAAKRKEEAQL 147
Query: 163 SRTECYLEGRVPLQTLRAHI 182
+RT Y EG L+T R I
Sbjct: 148 TRTTWYHEGSDSLKTARLWI 167
>gi|118724885|gb|ABL11024.1| ribosomal protein S3 [Codium lucasii]
Length = 25
Score = 39.6 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 182 IDYGTAVAETAYGSCGIKVYVSLR 205
IDY +A+T YG GIK+++ +
Sbjct: 1 IDYTCQIAKTIYGILGIKIWIFQK 24
>gi|118724897|gb|ABL11032.1| ribosomal protein S3 [Codium minus]
Length = 38
Score = 39.6 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 16/24 (66%)
Query: 182 IDYGTAVAETAYGSCGIKVYVSLR 205
IDY +A+T YG GIK+++ +
Sbjct: 1 IDYSFKIAKTIYGILGIKIWIFQK 24
>gi|195650699|gb|ACG44817.1| hypothetical protein [Zea mays]
Length = 80
Score = 39.6 bits (91), Expect = 0.36, Method: Composition-based stats.
Identities = 11/51 (21%), Positives = 19/51 (37%), Gaps = 6/51 (11%)
Query: 166 ECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL----RDEVSD 210
+ +G + Q + +ID G GIKV + L + +V
Sbjct: 1 MKFKDGYMISSGQPVNEYIDSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGP 51
>gi|118724708|gb|ABL10906.1| ribosomal protein S3 [Codium arabicum]
Length = 25
Score = 39.6 bits (91), Expect = 0.37, Method: Composition-based stats.
Identities = 10/24 (41%), Positives = 17/24 (70%)
Query: 182 IDYGTAVAETAYGSCGIKVYVSLR 205
IDY + +A+T YG GIK+++ +
Sbjct: 1 IDYTSQIAKTIYGILGIKIWIFQK 24
>gi|302142415|emb|CBI19618.3| unnamed protein product [Vitis vinifera]
Length = 576
Score = 39.2 bits (90), Expect = 0.42, Method: Composition-based stats.
Identities = 18/81 (22%), Positives = 32/81 (39%), Gaps = 9/81 (11%)
Query: 133 AMKRAVQSAMRFGADGVKV-IASGRLNG-----AELSRTECYLEGR--VPLQTLRAHIDY 184
+ RA Q+ G G K+ + L G A+ +++ + +G Q ++ +ID
Sbjct: 44 IIIRATQTHNVLGEKGKKIKELTSLLGGLAMLCAQRAKSMKFKDGYLISSGQPVKDYIDL 103
Query: 185 GTAVAETAYGSCGIKVYVSLR 205
G GIKV +
Sbjct: 104 AVRHVL-RQGVLGIKVKIMFN 123
>gi|73982323|ref|XP_851416.1| PREDICTED: similar to 40S ribosomal protein S3 [Canis familiaris]
Length = 161
Score = 39.2 bits (90), Expect = 0.48, Method: Composition-based stats.
Identities = 24/168 (14%), Positives = 52/168 (30%), Gaps = 46/168 (27%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIH 100
E+L L + G +++ + T II+ + R ++G+K + +
Sbjct: 23 EFLTRELAEDGDSRVEVRVTPTKPEIIILTTRTQNVLGEKAGG-----------CGNGLL 71
Query: 101 LSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLNGA 160
FRR + GA G + + SG+L G
Sbjct: 72 W----------------------------FRRGG----LAVQESGAKGYEAMVSGKLQG- 98
Query: 161 ELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSLRD 206
+ +++ +++ + + ++D G G K
Sbjct: 99 QRAKSAKFVDDSMIHSRDCVNHYVDTSVHHVLLRQGVLGSKCRSCFPG 146
>gi|296083751|emb|CBI23740.3| unnamed protein product [Vitis vinifera]
Length = 458
Score = 38.8 bits (89), Expect = 0.50, Method: Composition-based stats.
Identities = 23/124 (18%), Positives = 46/124 (37%), Gaps = 12/124 (9%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+G D+ + + ++ E+ + A L ++ R + VQ
Sbjct: 86 RGVDLSASNMEKYTIWVLQLRDFCTEI-------IIHATQTQNVLCKKGKKIRELTSVVQ 138
Query: 140 S--AMRFGADGVKVIASGRLNGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGS 195
M G G +VI SG+L + +++ + +G + Q ++ +ID G
Sbjct: 139 KRFVMESGTKGCEVIMSGKLC-VQCAKSIKFKDGYLIFSGQLVKDYIDSTVRHVLLKQGI 197
Query: 196 CGIK 199
IK
Sbjct: 198 LSIK 201
Score = 38.1 bits (87), Expect = 0.98, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Query: 63 NCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTN---SEIHLSVNEVPKPEINATLIAQS 119
+ II+++ + ++GKKG I ++ + + + L + A A+S
Sbjct: 328 HMEIIIHATQTQNVLGKKGRKIRELTSVVQKRFEFLENNVELYAEKFNNRVFYAIAQAES 387
Query: 120 IAQQLERRVVFRRAMKRAV 138
+ +L +V RRA +
Sbjct: 388 LRFKLLGGLVVRRAGYGVL 406
>gi|32400841|gb|AAP80652.1|AF479033_1 40S ribosomal protein [Triticum aestivum]
Length = 79
Score = 38.8 bits (89), Expect = 0.58, Method: Composition-based stats.
Identities = 10/66 (15%), Positives = 23/66 (34%), Gaps = 6/66 (9%)
Query: 167 CYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL----RDEVSDSDSTIPAAEH 220
+ +G + Q + +ID G GIKV + L + ++ +
Sbjct: 3 KFKDGYMISSGQPVNEYIDAAVRHVLLRQGVLGIKVKIMLDWDPKGKLGPTTPLPDLVTI 62
Query: 221 RVVEKD 226
+++
Sbjct: 63 HPPKEE 68
>gi|209427656|ref|YP_002274330.1| ribosomal protein [Blastocladiella emersonii]
gi|82492284|gb|ABB78023.1| ribosomal protein [Blastocladiella emersonii]
Length = 233
Score = 38.4 bits (88), Expect = 0.67, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 24/55 (43%)
Query: 148 GVKVIASGRLNGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETAYGSCGIKVYV 202
G+++ G +S+ G + + + ID+G A G G+KV++
Sbjct: 169 GIRIEIKGITGKMTMSKKVIKTFGTLRFNSSDSVIDFGEARNFNKKGIIGVKVWI 223
>gi|212995900|ref|YP_002317404.1| ribosomal protein S3 [Cryptococcus neoformans var. grubii]
Length = 235
Score = 38.4 bits (88), Expect = 0.71, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 56/144 (38%), Gaps = 14/144 (9%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAV- 138
I + + LSN+ + L + ++ P +N+ ++A I + L+ F R + +
Sbjct: 85 NANTINALGEVLSNVWGQAVELRLVKLHYPYLNSDILAAFIMKNLDTDR-FERVINKIFG 143
Query: 139 --------QSAMRFGADGVKVIASGRL---NGAELSRTECYLEGRVPLQTLRAHIDYGTA 187
+S + G+K+ +GRL + G T R I++G
Sbjct: 144 ITTPVVSGESNLPSHIIGIKIRLAGRLVTEPSRPRMTVQSAQIGSFKNST-RTIIEFGQC 202
Query: 188 VAETAYGSCGIKVYVSLRDEVSDS 211
+ G+ ++V++S R
Sbjct: 203 SSVNKKGALTVQVWISQRSTTPTH 226
>gi|326427414|gb|EGD72984.1| hypothetical protein PTSG_13218 [Salpingoeca sp. ATCC 50818]
Length = 910
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 17/142 (11%), Positives = 44/142 (30%), Gaps = 3/142 (2%)
Query: 38 KIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
KI E + + + +++ + R ++ G K + ++ N+
Sbjct: 132 KINEDFEEFTDRLHSQMSDFDADQFAAVVMIQAFRDPKLVAFAGDRRPKNVAEAFDVINN 191
Query: 98 EIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVK---VIAS 154
+ +V + + + + + +R +R + Q + +
Sbjct: 192 YYVANPFKVKRTQASTSSNFPPFRSKRAKRHQHQRPQHQRPQHSRPQHQRSFRSLACGRC 251
Query: 155 GRLNGAELSRTECYLEGRVPLQ 176
GR N +E + LQ
Sbjct: 252 GRFNHSEDKCHAKFHANGKHLQ 273
>gi|302748541|gb|ADL63751.1| ribosomal protein S3 [Anisophyllea sp. Boyce 758]
Length = 448
Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 21/79 (26%), Positives = 40/79 (50%), Gaps = 4/79 (5%)
Query: 83 DIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV-FRRA---MKRAV 138
+++K+R LSN T + + ++ +A+ IAQ I+ QL + FR + + +
Sbjct: 370 EVKKMRSLLSNRTKTNTLIESVKIKSVYQSASPIAQDISFQLRNKTRSFRSIYSKIVKDI 429
Query: 139 QSAMRFGADGVKVIASGRL 157
M G +G+++ SGR
Sbjct: 430 PLVMNKGVEGIRICCSGRS 448
>gi|273068646|gb|ACZ97564.1| ribosomal protein 3 [Kernia pachypleura]
Length = 485
Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 45/118 (38%), Gaps = 5/118 (4%)
Query: 38 KIREYL----QCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSN 93
KI Y+ LK+ K+ R R VY+ + ++ + K+ L
Sbjct: 200 KIMNYVIYPLMNILKRIFFNKLKFIRKINIIRNHVYTYKINKFKFEEIYFLYKLNNILEK 259
Query: 94 MTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVF-RRAMKRAVQSAMRFGADGVK 150
+ N +I ++ + N + +++A +L +R F R + + A + +
Sbjct: 260 ILNKKIEYNIINLKSLVYNTDIFTKALALKLRKRKFFVMRGINSIINRARLPKVNTIM 317
>gi|45477034|sp|P92511|M690_ARATH RecName: Full=Uncharacterized ribosomal S3-like protein
AtMg00690, mitochondrial; AltName: Full=ORF240a
Length = 240
Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 13/24 (54%), Positives = 17/24 (70%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFA 24
M +K NPIL RLG N + +S WF+
Sbjct: 46 MARKGNPILVRLGKNRSSDSSWFS 69
>gi|312623415|ref|YP_004025028.1| glycoside hydrolase family 43 [Caldicellulosiruptor kronotskyensis
2002]
gi|312203882|gb|ADQ47209.1| glycoside hydrolase family 43 [Caldicellulosiruptor kronotskyensis
2002]
Length = 1338
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 25/155 (16%), Positives = 52/155 (33%), Gaps = 17/155 (10%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIH 100
YL+ +L Q + L + K ++ +Y K ++ + ++ +
Sbjct: 722 NYLKVYLDQTEI--FLDNSSEKKYQVSIYVNSLPKNKKIKQVELLLNHPEWIDVAGIKKE 779
Query: 101 LSVNE---VPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRL 157
+ E V + A SI+ +K+ + V + ++
Sbjct: 780 NKLLENAIVKVVKREANHTTISISN-----------IKKELIDKDNKWQKIVSIQLKRKI 828
Query: 158 NGAELSRTECYLEGRVPLQTLRAHIDYGTAVAETA 192
+E ++ E LQT + I YG+ A T
Sbjct: 829 KPSESNKGE-ISIKSFVLQTEKEKISYGSDAAVTK 862
>gi|149391843|gb|ABR25845.1| 40S ribosomal protein S3-a [Oryza sativa Indica Group]
Length = 85
Score = 37.3 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 9/44 (20%), Positives = 18/44 (40%), Gaps = 2/44 (4%)
Query: 163 SRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYVSL 204
+++ + +G + + +ID G GIKV + L
Sbjct: 1 AKSMKFKDGYMISSGYPVNLYIDSAVRHVLLRQGVLGIKVKIML 44
>gi|60117122|ref|YP_209585.1| ribosomal protein S3 [Polysphondylium pallidum]
gi|51339686|gb|AAU00600.1| ribosomal protein S3 [Polysphondylium pallidum]
Length = 389
Score = 37.3 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 19/104 (18%), Positives = 40/104 (38%), Gaps = 4/104 (3%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYG-ALLHEDLKIREYLQCHLKQAGVAKIL--- 56
MG +NP++ RLGV W + ++R + E+ + Y++ K+L
Sbjct: 1 MGHVVNPVVLRLGVITPWIAASYSRKNNKRIQYTIENFLVYNYIRKFFNNKIYLKVLSKI 60
Query: 57 IERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIH 100
+R K + ++S P + I + ++ +
Sbjct: 61 RKRKKKYLKNFLFSNFPYIFSHLSIMRITNNYQLNLFFYDTSLQ 104
>gi|224150034|ref|XP_002199784.1| PREDICTED: similar to rCG40478, partial [Taeniopygia guttata]
Length = 116
Score = 37.3 bits (85), Expect = 1.8, Method: Composition-based stats.
Identities = 15/70 (21%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 41 EYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIH 100
E+L L + G + + + T II+ + R ++G+KG I ++ +
Sbjct: 36 EFLTRELAEDGYSGVEVRVTPTRTEIIILATRTQNVLGEKGRRIRELTAVVQKRFGFP-- 93
Query: 101 LSVNEVPKPE 110
EV +P+
Sbjct: 94 EGSVEVKRPQ 103
>gi|1911517|gb|AAB50696.1| ribosomal 30S protein TS3 {N-terminal} [Thermus thermophilus,
Peptide Partial, 15 aa]
Length = 15
Score = 36.9 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 2 GQKINPILFRLGVNC 16
G KI+PI FRLG+
Sbjct: 1 GNKIHPIGFRLGITR 15
>gi|146296118|ref|YP_001179889.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|145409694|gb|ABP66698.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 340
Score = 36.9 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 26/127 (20%), Positives = 48/127 (37%), Gaps = 4/127 (3%)
Query: 27 SEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRII--VYSARPGLIIGKKGTDI 84
+Y L D+++R Y +L++ G + R + RII +Y I I
Sbjct: 119 RKYIEELKRDMEMRNYFNQYLRKIGSDENHFYRDLQKTRIINKLYKYVTERITLSDSEVI 178
Query: 85 EKIRKKLSNMTNSEIHLSVNEVPKPEINAT--LIAQSIAQQLERRVVFRRAMKRAVQSAM 142
+ S ++ V E +A +A I +L+R F + +K+ +
Sbjct: 179 KYYNANKSQFRKIKVMDIFLRVENAEEDAKKRKVANEIISELKRGEDFEKLVKKYSEVES 238
Query: 143 RFGADGV 149
G G+
Sbjct: 239 LDGKKGI 245
>gi|200004052|ref|YP_002221386.1| ribosomal protein S3 [Blastocystis sp. NandII]
gi|198385474|gb|ACH86067.1| ribosomal protein S3 [Blastocystis sp. NandII]
Length = 345
Score = 36.5 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 46/104 (44%), Gaps = 11/104 (10%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFAR-GSEYGALLHEDLKIREYLQCHLKQA------GVA 53
M QK++PILF NS+W+ + +++ L+EDL+IRE + K +
Sbjct: 1 MSQKVSPILF--NNTIYNNSKWYNKINNKFA--LNEDLQIREIINILFKNNVNYQYLFID 56
Query: 54 KILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNS 97
KI+I + + +I +Y + K +K + +
Sbjct: 57 KIVIYKYYSKIKIYIYFFCNLNYLKKNLILRKKNYLNIIYIYYK 100
>gi|320593513|gb|EFX05922.1| hypothetical protein CMQ_3991 [Grosmannia clavigera kw1407]
Length = 277
Score = 36.5 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 21/118 (17%), Positives = 35/118 (29%), Gaps = 5/118 (4%)
Query: 18 WNSRWFA-RGSEYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLI 76
W WF R + L +D IR + + + + P
Sbjct: 160 WEDFWFCMRVKSFSPGLAKDEAIRSHFRKREMEKYYTPSSRSSEDVWRSRTIDEVLPPDA 219
Query: 77 IGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAM 134
+ K S + + + KP + A+ I LERR + R+ M
Sbjct: 220 VFNKSFKAVLSGGSSSAPDGT----NTDPSTKPPASEQRDAEQIRADLERRRLIRQQM 273
>gi|145543859|ref|XP_001457615.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124425432|emb|CAK90218.1| unnamed protein product [Paramecium tetraurelia]
Length = 707
Score = 36.5 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 39/106 (36%), Gaps = 4/106 (3%)
Query: 28 EYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPG---LIIGKKGTDI 84
+Y ED +I + +L+Q I I + +I+ + + + +K
Sbjct: 269 QYPDYYIEDSEIAQIFADYLEQTNCKNIKIRLEKRMKEVIIQTTQTETILKMFQRKNIKS 328
Query: 85 EKIRKKLSNMTNSEIHLSVNEVPKPEINATLIA-QSIAQQLERRVV 129
K + +N+ + + ++ TL + QL+++
Sbjct: 329 IKNLIQKCKSSNNLEMIQDSYPKIKQLQTTLQQLEQFKNQLQKKQQ 374
>gi|146749412|gb|ABQ44358.1| ribosomal protein S3 [Methanohalophilus portucalensis FDF-1]
Length = 151
Score = 36.5 bits (83), Expect = 3.0, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 11/27 (40%)
Query: 185 GTAVAETAYGSCGIKVYVSLRDEVSDS 211
G AVA G+ G KV + V
Sbjct: 2 GLAVAVKKLGTIGCKVRIIHPGAVLPD 28
>gi|328953795|ref|YP_004371129.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
[Desulfobacca acetoxidans DSM 11109]
gi|328454119|gb|AEB09948.1| 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
[Desulfobacca acetoxidans DSM 11109]
Length = 281
Score = 36.5 bits (83), Expect = 3.1, Method: Composition-based stats.
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 21 RWFARGSEYGALLHEDLKIREYLQCHLKQ 49
+W+ + Y L DL+ R +++ L
Sbjct: 13 KWYLQAKNYADDLLSDLRRRRFIKKFLSD 41
>gi|68010962|ref|XP_670951.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56486681|emb|CAI03517.1| hypothetical protein PB301211.00.0 [Plasmodium berghei]
Length = 82
Score = 36.5 bits (83), Expect = 3.2, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Query: 160 AELSRTECYLEGR--VPLQTLRAHIDYGTAVAETAYGSCGIKVYVSLR 205
A+ +++ + +G + + ++ T A+ G GIKV + L
Sbjct: 5 AQRAKSMKFRDGHLISTGEPSKRFVNTATRSAQLNQGVLGIKVKIMLP 52
>gi|328541234|gb|AEB21841.1| ribosomal protein S3 [Telaranea herzogii]
Length = 324
Score = 36.1 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 15/75 (20%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309
Query: 140 SAMRF-GADGVKVIA 153
+ G+++
Sbjct: 310 QIKKCPYVKGIRIGC 324
>gi|66359472|ref|XP_626914.1| centrin like EF hand protein [Cryptosporidium parvum Iowa II]
gi|46228080|gb|EAK88979.1| centrin like EF hand protein [Cryptosporidium parvum Iowa II]
Length = 471
Score = 36.1 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 37/110 (33%), Gaps = 3/110 (2%)
Query: 23 FARGSEYGALLHEDLKIREYLQCHLKQAGVA--KILIER-THKNCRIIVYSARPGLIIGK 79
F +G LL E +I +++ L ++ K I T + I+ I
Sbjct: 316 FEDRQLFGKLLMELYEIESFIKRSLVESFGMEWKAKINMNTDTKYKTIIEFYNLVKKIIG 375
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV 129
K T+ E + EV N + Q++ LE R+
Sbjct: 376 KLTESENYEIITFKRNKYVVIEKKVEVFFSIFNNIINQQNLINNLENRIK 425
>gi|7524995|ref|NP_050093.1| ORF425 [Dictyostelium discoideum]
gi|1088429|dbj|BAA04739.1| unnamed protein product [Dictyostelium discoideum]
gi|4958898|dbj|BAA78075.1| ORF425 [Dictyostelium discoideum]
Length = 425
Score = 36.1 bits (82), Expect = 4.1, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 46/134 (34%), Gaps = 8/134 (5%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALL-HEDLKIREYLQCHLKQAGVAKILIER 59
MG INP ++RLG W S F R + + +ED I + + + K++ +
Sbjct: 1 MGHIINPNIYRLGKMVPWVSSGFKRKKNERSKVANEDFLIYNFTRNFFYKKVYKKVVAKV 60
Query: 60 THKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQS 119
++ +K + + ++ I L
Sbjct: 61 KKAKLKVRNSRISRKSKKKRKFGRTSLLNHWIIKYSHLTITRFNK-------TFQLNIFF 113
Query: 120 IAQQLERRVVFRRA 133
++L++R + R A
Sbjct: 114 FDRELQKRYILRTA 127
>gi|87043008|ref|YP_492622.1| Mp26-like protein [Dictyostelium citrinum]
gi|84682108|gb|ABC60373.1| Mp26-like protein [Dictyostelium citrinum]
Length = 432
Score = 35.7 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
Query: 1 MGQKINPILFRLGVNCTWNSRWFARGSEYGALL-HEDLKIREYLQCHL 47
MG INP ++RLG W S F R + + +ED I + +
Sbjct: 1 MGHIINPNIYRLGKIVPWVSSGFKRNKNERSKVANEDFLIYNFTRNFF 48
>gi|155199144|gb|ABT17135.1| ribosomal protein S3 [Codium fragile subsp. atlanticum]
gi|155199147|gb|ABT17137.1| ribosomal protein S3 [Codium fragile subsp. tomentosoides]
gi|155199150|gb|ABT17139.1| ribosomal protein S3 [Codium fragile]
gi|155199153|gb|ABT17141.1| ribosomal protein S3 [Codium fragile]
gi|155199156|gb|ABT17143.1| ribosomal protein S3 [Codium fragile]
gi|155199159|gb|ABT17145.1| ribosomal protein S3 [Codium fragile]
gi|155199162|gb|ABT17147.1| ribosomal protein S3 [Codium fragile]
gi|155199165|gb|ABT17149.1| ribosomal protein S3 [Codium fragile]
gi|155199168|gb|ABT17151.1| ribosomal protein S3 [Codium fragile]
gi|155199171|gb|ABT17153.1| ribosomal protein S3 [Codium fragile]
Length = 19
Score = 35.7 bits (81), Expect = 4.4, Method: Composition-based stats.
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 188 VAETAYGSCGIKVYVSLR 205
A+T YG GIK+++
Sbjct: 1 TAKTIYGILGIKIWIFQP 18
>gi|328541212|gb|AEB21830.1| ribosomal protein S3 [Lembidium nutans]
Length = 323
Score = 35.7 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 14/75 (18%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ + K++ S+ T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 249 RYYYLRKMQSLFSDQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFR 308
Query: 140 SAMRF-GADGVKVIA 153
+ G+++
Sbjct: 309 QIKKCPYVKGIRIGC 323
>gi|161899235|ref|XP_001712844.1| ribosomal protein S3 [Bigelowiella natans]
gi|75756337|gb|ABA27232.1| ribosomal protein S3 [Bigelowiella natans]
Length = 262
Score = 35.4 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 22/190 (11%), Positives = 61/190 (32%), Gaps = 19/190 (10%)
Query: 39 IREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKIRKKLSNMTNSE 98
I+++ + + + K+ T K + + + ++ KI K +N
Sbjct: 79 IKKFFKKNCRFHYHQKLHCSFTKKLKNKLTLTKNIISHLFFINSNKLKILYKNYKSSNIS 138
Query: 99 IHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQSAMRFGADGVKVIASGRLN 158
+ + + FR + ++ + G G + G +
Sbjct: 139 TMTQSSRMKEAFNYTN-------------KSFRSIIFNTLRFLINSGVRGCMIKLKG-VY 184
Query: 159 GAELSRTECYLEGRVPLQTLRAH--IDYGTAVAETAYGSCGIKVYVSLRD---EVSDSDS 213
++ ++T + G + ++ + ID + G+ GI + + ++ +
Sbjct: 185 RSKRTKTFKFRRGLISHSGIQNNDWIDSDSFYLNKKRGTLGINIKIMKKERKNYFLNKKH 244
Query: 214 TIPAAEHRVV 223
+P R
Sbjct: 245 LVPGKIRRKS 254
>gi|67923721|ref|ZP_00517187.1| hypothetical protein CwatDRAFT_2608 [Crocosphaera watsonii WH
8501]
gi|67854429|gb|EAM49722.1| hypothetical protein CwatDRAFT_2608 [Crocosphaera watsonii WH
8501]
Length = 119
Score = 35.4 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 19 NSRWFARGSEYGALLHEDLKIRE 41
+S W+A Y L ED K+R+
Sbjct: 65 HSNWYADEESYAKRLKEDRKLRK 87
>gi|300114868|ref|YP_003761443.1| outer membrane protein assembly complex protein YaeT [Nitrosococcus
watsonii C-113]
gi|299540805|gb|ADJ29122.1| outer membrane protein assembly complex, YaeT protein
[Nitrosococcus watsonii C-113]
Length = 766
Score = 35.4 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 14/63 (22%), Positives = 21/63 (33%), Gaps = 6/63 (9%)
Query: 12 LGVNCTWNSRW---FARGSEYG-ALLHEDLK-IREY-LQCHLKQAGVAKILIERTHKNCR 65
LG S W F +Y L DL+ +R Y L + + T R
Sbjct: 201 LGAFQLHTSNWLSFFTHDDQYSRQKLAADLEALRSYYLDRGYINFNIDSTQVSITPDKRR 260
Query: 66 IIV 68
+ +
Sbjct: 261 VFI 263
>gi|189461365|ref|ZP_03010150.1| hypothetical protein BACCOP_02020 [Bacteroides coprocola DSM 17136]
gi|189431894|gb|EDV00879.1| hypothetical protein BACCOP_02020 [Bacteroides coprocola DSM 17136]
Length = 994
Score = 35.4 bits (80), Expect = 6.8, Method: Composition-based stats.
Identities = 21/148 (14%), Positives = 52/148 (35%), Gaps = 17/148 (11%)
Query: 24 ARGSEYGALLHEDLKI-------REYLQCHLKQAGVAKILIERTHK---NCRIIVYSARP 73
A EY L+ D+ + R+ + + + I K I ++ R
Sbjct: 233 ADRIEYIDSLNLDMDLSSISHNKRKSIARRIVHRRLYSIERSSQEKIYPGIVIYIHETRK 292
Query: 74 ---GLIIGKKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVF 130
++ + + +K I + E+ K + + IA++++ L +
Sbjct: 293 MLLDFVVESNDAILHNLLRKSEKRNEKTILQNSKEIFKNQSDLLSIAEAVSFSLRHKKNL 352
Query: 131 RRAMKR----AVQSAMRFGADGVKVIAS 154
R +K+ ++++ G ++ S
Sbjct: 353 RTELKKRNFSSLEALDLIIKRGYELNCS 380
>gi|32423679|gb|AAP81222.1| ribosomal protein S3 [Candidatus Portiera aleyrodidarum]
Length = 34
Score = 35.0 bits (79), Expect = 7.1, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 191 TAYGSCGIKVYVSLRDEVS 209
T+YG GIKV+V + +
Sbjct: 1 TSYGVIGIKVWVFKGERIG 19
>gi|156095610|ref|XP_001613840.1| hypothetical protein [Plasmodium vivax SaI-1]
gi|148802714|gb|EDL44113.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 11429
Score = 35.0 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 17/127 (13%), Positives = 50/127 (39%), Gaps = 4/127 (3%)
Query: 21 RWFARGSEYGALLHEDLKIR-EYLQCHLKQA-GVAKILIERTHKNCRIIVYSARPGLIIG 78
WF + L+ EDL+I+ E + + + + + + + +++ +I
Sbjct: 5968 NWFIPKIKERKLVKEDLEIKLEEINVYEESDLHCLEKIRKFSCSIKKLLKKYNNTIVIQL 6027
Query: 79 KKGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAV 138
K+ + K+ K + + + L + ++L +++ F R+ ++ +
Sbjct: 6028 KRNHSMNKVHIKCIENSKLSKTNFCSNCKSNYVC--LCQKIKKEELRKKMNFIRSQEKRI 6085
Query: 139 QSAMRFG 145
++ G
Sbjct: 6086 EAIRTNG 6092
>gi|315465331|emb|CBQ72566.1| small ribosomal protein subunit 3 [Sporisorium reilianum]
Length = 268
Score = 35.0 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 48/123 (39%), Gaps = 10/123 (8%)
Query: 93 NMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVV--FRRAM--KRAVQSAM-RFGAD 147
+ E+++ + P +N+++++Q IA FR A+ K ++
Sbjct: 144 QVYQKEVNIIATRLYYPYLNSSILSQYIAHNASSNTFINFREAILTKPSLHKTNLPAHIS 203
Query: 148 GVKVIASGRL---NGAELSRTECYLEGRV--PLQTLRAHIDYGTAVAETAYGSCGIKVYV 202
G+KV SGRL + Y+ G IDY + G+ +KV++
Sbjct: 204 GIKVQVSGRLVTERVIPRITVKSYVIGSFQRSSNNATQIIDYSKFTTKNELGAFTVKVWI 263
Query: 203 SLR 205
R
Sbjct: 264 CQR 266
>gi|328541260|gb|AEB21854.1| ribosomal protein S3 [Acromastigum mooreanum]
Length = 323
Score = 35.0 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309
Query: 140 SAMRF-GADGVKV 151
+ G+++
Sbjct: 310 QIKKCPYVKGIRI 322
>gi|297264525|ref|XP_001107256.2| PREDICTED: ankyrin and armadillo repeat-containing protein-like
[Macaca mulatta]
Length = 1434
Score = 35.0 bits (79), Expect = 8.2, Method: Composition-based stats.
Identities = 18/108 (16%), Positives = 41/108 (37%), Gaps = 12/108 (11%)
Query: 28 EYGALLHEDLKIREYLQCHLKQAGVAKILIERTHKNCRIIVYSARPGLIIGKKGTDIEKI 87
++ L KIR+ A + + + + + ++ + T +++
Sbjct: 399 DFQKNLE---KIRDC----AANAFIEDSGYKEYYSIPVMEFHGKSYYVMYFELETFYQQL 451
Query: 88 RKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMK 135
K +EI ++ P +A L +Q +++ F+RAMK
Sbjct: 452 YKTQWWGAINEIMNNLRPKRLPLTDAQL-----HEQFKKKFGFKRAMK 494
>gi|328541312|gb|AEB21880.1| ribosomal protein S3 [Lepidozia cupressina]
Length = 323
Score = 35.0 bits (79), Expect = 8.6, Method: Composition-based stats.
Identities = 15/73 (20%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 80 KGTDIEKIRKKLSNMTNSEIHLSVNEVPKPEINATLIAQSIAQQLERRVVFRRAMKRAVQ 139
+ ++K++ SN T + + ++ +A+LIAQ I+ +LE++ FR+ + +
Sbjct: 250 RYYYLKKMQSLFSNQTKTNTLIRPVKIASVYRSASLIAQEISWKLEQKKSFRQICRSIFK 309
Query: 140 SAMRF-GADGVKV 151
+ G+++
Sbjct: 310 QIKKCPYVKGIRI 322
Database: nr
Posted date: May 13, 2011 4:10 AM
Number of letters in database: 999,999,932
Number of sequences in database: 2,987,209
Database: /data/usr2/db/fasta/nr.01
Posted date: May 13, 2011 4:17 AM
Number of letters in database: 999,998,956
Number of sequences in database: 2,896,973
Database: /data/usr2/db/fasta/nr.02
Posted date: May 13, 2011 4:23 AM
Number of letters in database: 999,999,979
Number of sequences in database: 2,907,862
Database: /data/usr2/db/fasta/nr.03
Posted date: May 13, 2011 4:29 AM
Number of letters in database: 999,999,513
Number of sequences in database: 2,932,190
Database: /data/usr2/db/fasta/nr.04
Posted date: May 13, 2011 4:33 AM
Number of letters in database: 792,586,372
Number of sequences in database: 2,260,650
Lambda K H
0.313 0.140 0.457
Lambda K H
0.267 0.0430 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,875,989,644
Number of Sequences: 13984884
Number of extensions: 75260429
Number of successful extensions: 225558
Number of sequences better than 10.0: 3992
Number of HSP's better than 10.0 without gapping: 3881
Number of HSP's successfully gapped in prelim test: 111
Number of HSP's that attempted gapping in prelim test: 218120
Number of HSP's gapped (non-prelim): 4385
length of query: 227
length of database: 4,792,584,752
effective HSP length: 134
effective length of query: 93
effective length of database: 2,918,610,296
effective search space: 271430757528
effective search space used: 271430757528
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 79 (35.0 bits)