HHsearch alignment for GI: 254780256 and conserved domain: COG0091
>COG0091 RplV Ribosomal protein L22 [Translation, ribosomal structure and biogenesis].
Probab=100.00 E-value=7.8e-41 Score=261.43 Aligned_cols=113 Identities=51% Similarity=0.648 Sum_probs=110.9
Q ss_pred HHHEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEEEECC
Q ss_conf 01123112148750889999999984798699999888658202479999999999999984059982336999999889
Q gi|254780256|r 13 GDNEANAIASMLRVSPQKLNLVAAMIRGKRVSDALADLEFSRKRIAGEVRKTLCSAVANAENNHDLDVDRLIVSEAYVGK 92 (131)
Q Consensus 13 ~~~e~~A~~k~ir~Sp~K~r~va~~IrG~~v~eAl~~L~f~~kk~A~~i~k~L~SA~aNA~~n~~ld~~~L~I~~~~v~~ 92 (131)
T Consensus 7 ~~~~akA~~r~~riSpkk~r~Va~~IrG~~v~~A~~~L~~~pkKaa~~v~KvL~sA~aNAe~n~gLd~d~L~V~~i~v~~ 86 (120)
T COG0091 7 PEMEAKAKARYLRISPKKARLVADLIRGKKVAEALAILEFVPKKAAKLVKKVLESAIANAENNKGLDPDKLVVSHIAVDK 86 (120)
T ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEEEECC
T ss_conf 03667764123767868999999998399499999999867488899999999999965775149986787999998478
Q ss_pred CCEEEEEEECCCCCCCCEECCCCEEEEEEEECC
Q ss_conf 811420102566663720178500899998517
Q gi|254780256|r 93 SVFMKRFHCRGRQRIGRIVRPFSRLTVIVREVS 125 (131)
Q Consensus 93 G~~~KR~~prarGRa~~i~k~~sHi~VvL~e~~ 125 (131)
T Consensus 87 gp~lKR~~pRA~GRa~~i~k~tshItvvv~e~~ 119 (120)
T COG0091 87 GPVLKRFMPRARGRATRINKRTSHITVVVREKE 119 (120)
T ss_pred CCEEEEECCCCCCCCCCCCCCCCEEEEEEEECC
T ss_conf 842220134136765632478700899996068