HHsearch alignment of GI: 254780256 and MMDB domain: 2zkr_r_
>2zkr_r (r:) 60S ribosomal protein L17; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=100.00 E-value=5.6e-36 Score=232.43 Aligned_cols=116 Identities=26% Similarity=0.256 Sum_probs=110.2
Q ss_pred HHHHHEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHC--------------------------------CCHHH
Q ss_conf 2101123112148750889999999984798699999888658--------------------------------20247
Q gi|254780256|r 11 RMGDNEANAIASMLRVSPQKLNLVAAMIRGKRVSDALADLEFS--------------------------------RKRIA 58 (131)
Q Consensus 11 ~~~~~e~~A~~k~ir~Sp~K~r~va~~IrG~~v~eAl~~L~f~--------------------------------~kk~A 58 (131)
...+++++|.++++++||+|+++|+++||||++++|+.||+|+ |+++|
T Consensus 9 ~~~~~~~ka~~~~i~~S~kK~~~va~~Irg~~v~~A~~~L~~v~~~k~~vp~~r~~~~~~~~~~~~~~~~~~~~~pkKaa 88 (184)
T 2zkr_r 9 ENPTKSCKSRGSNLRVHFKNTRETAQAIKGMHIRKATKYLKDVTLQKQCVPFRRYNGGVGRCAQAKQWGWTQGRWPKKSA 88 (184)
T ss_dssp SCTTTEEEEEECSCCSCHHHHHHHHHHHTTSBHHHHHHHHHHHHHTSSCEECSSSCTTCCBCCSTTSCSCSBEECCHHHH
T ss_pred CCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 89875389966877476699999999878987999999999987500023677532776640002336878664818899
Q ss_pred HHHHHHHHHHHHHHHHCCCCCHHHEEEEEEEECCCCEEEEEEECCCCCCCCEECCCCEEEEEEEECCCC
Q ss_conf 999999999999998405998233699999988981142010256666372017850089999851723
Q gi|254780256|r 59 GEVRKTLCSAVANAENNHDLDVDRLIVSEAYVGKSVFMKRFHCRGRQRIGRIVRPFSRLTVIVREVSDE 127 (131)
Q Consensus 59 ~~i~k~L~SA~aNA~~n~~ld~~~L~I~~~~v~~G~~~KR~~prarGRa~~i~k~~sHi~VvL~e~~~~ 127 (131)
.+|.++|+||.+||+++ |+|+|+|||++||||+|+++||++|||+||++++++++|||+|||+|.++.
T Consensus 89 ~~i~k~L~sa~aNA~~~-g~D~~~L~I~~~~v~~G~~~Kr~~~rArGRa~~i~k~~~hi~vvL~e~~~~ 156 (184)
T 2zkr_r 89 EFLLHMLKNAESNAELK-GLDVDSLVIEHIQVNKAPKMRRRTYRAHGRINPYMSSPCHIEMILTEKEQI 156 (184)
T ss_dssp HHHHHHHHHHHHHHHHH-TSCTTTCEEEEEEEC-CCCEEEEEEETTTEEEEEEEC-CCEEEEEECC---
T ss_pred HHHHHHHHHHHHHHHHC-CCCCCCCEEEEEEECCCCEECCCCCCCCCCCCCCCCCCCCEEEEEEECCCC
T ss_conf 99999999999889864-998543289999858985103655046777786047985189999636645