HHsearch results for GI: 254780256 and protein with PDBid: 1i4j_A
>1i4j_A 50S ribosomal protein L22; mutant, erythromycin resistance, RNA binding, RNA binding protein; 1.80A {Thermus thermophilus} SCOP: d.55.1.1 PDB: 1bxe_A 1giy_S 1ml5_s* 1vsa_Q 1vsp_Q 1yl3_S 2b66_W 2b9n_W 2b9p_W 2hgj_V 2hgq_V 2hgu_V 2j01_W 2j03_W 2jl6_W 2jl8_W 2v47_W 2v49_W 2wdi_W 2wdj_W ...
Probab=100.00 E-value=3.5e-40 Score=256.29 Aligned_cols=110 Identities=44% Similarity=0.494 Sum_probs=106.0
Q ss_pred HEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEEEECCCC
Q ss_conf 12311214875088999999998479869999988865820247999999999999998405998233699999988981
Q gi|254780256|r 15 NEANAIASMLRVSPQKLNLVAAMIRGKRVSDALADLEFSRKRIAGEVRKTLCSAVANAENNHDLDVDRLIVSEAYVGKSV 94 (131)
Q Consensus 15 ~e~~A~~k~ir~Sp~K~r~va~~IrG~~v~eAl~~L~f~~kk~A~~i~k~L~SA~aNA~~n~~ld~~~L~I~~~~v~~G~ 94 (131)
+|++|.+||+++||+|+|+|+++|||++|++|+.||+|+|+++|.+|+|+|+||++||++++|+|+|+|||+++|||+||
T Consensus 1 Me~~A~~r~ir~Sp~K~r~va~~IRG~~v~~Al~~L~f~~kk~A~~i~k~L~SA~aNA~~~~~~d~~~L~I~~~~v~~Gp 80 (110)
T 1i4j_A 1 MEAKAIARYVRISPRKVRLVVDLIRGKSLEEARNILRYTNKRGAYFVAKVLESAAANAVNNHDALEDRLYVKAAYVDEGP 80 (110)
T ss_dssp CCEEEEEEEESSCHHHHHHHHHHHTTCBHHHHHHHHHHCCCTTHHHHHHHHHHHHHHHHHTSCCCGGGEEEEEEEEEEEE
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCC
T ss_conf 90798818653288999999999869919999999821871219999999999999999854998102699999989997
Q ss_pred EEEEEEECCCCCCCCEECCCCEEEEEEEECCCC
Q ss_conf 142010256666372017850089999851723
Q gi|254780256|r 95 FMKRFHCRGRQRIGRIVRPFSRLTVIVREVSDE 127 (131)
Q Consensus 95 ~~KR~~prarGRa~~i~k~~sHi~VvL~e~~~~ 127 (131)
++ +||||||+++|+||+|||+|+|+|.+.+
T Consensus 81 ~~---kprarGRa~~i~k~~sHi~vvL~e~~~k 110 (110)
T 1i4j_A 81 AV---LPRARGRADIIKKRTSHITVILGEKHGK 110 (110)
T ss_dssp EE---CSCSSSCCCSCCEEEEEEEEEEEESSCC
T ss_pred EE---CCCCCCCCCCCCCCCCCEEEEEECCCCC
T ss_conf 48---8267898886068877789999336789