HHsearch results for GI: 254780256 and protein with PDBid: 2ftc_M
>2ftc_M Mitochondrial ribosomal protein L22 isoform A; mitochondrial ribosome, large ribosomal subunit, ribosomal RNA; 12.10A {Bos taurus} PDB: 3iy9_M
Probab=100.00 E-value=1.6e-39 Score=252.35 Aligned_cols=107 Identities=27% Similarity=0.421 Sum_probs=103.6
Q ss_pred CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC-HHHEEEEEEEECCCCEEEEE
Q ss_conf 14875088999999998479869999988865820247999999999999998405998-23369999998898114201
Q gi|254780256|r 21 ASMLRVSPQKLNLVAAMIRGKRVSDALADLEFSRKRIAGEVRKTLCSAVANAENNHDLD-VDRLIVSEAYVGKSVFMKRF 99 (131)
Q Consensus 21 ~k~ir~Sp~K~r~va~~IrG~~v~eAl~~L~f~~kk~A~~i~k~L~SA~aNA~~n~~ld-~~~L~I~~~~v~~G~~~KR~ 99 (131)
.+++++||+|+|+|+++|||++|+||++||+|+|+|+|..|.|+|+||++||++|+|+| +|+|||+++|||+||++|||
T Consensus 3 ~r~ir~SpkK~r~v~~~IrG~~v~~A~~~L~f~~kkaA~~i~k~l~sA~aNA~~~~~~~~~~~L~I~~~~v~~G~~~KR~ 82 (110)
T 2ftc_M 3 RRQIKYSKDKMWYLAKLIRGMSIDQALAQLEFNDKKGAKIIKEVLLEAQDMAVRDHNVEFRSNLYIAESTSGRGQCLKRI 82 (110)
T ss_pred CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCC
T ss_conf 56474487999999999869919999999811881008999999999999999861999767579999998999705476
Q ss_pred EECCCCCCCCEECCCCEEEEEEEECCCC
Q ss_conf 0256666372017850089999851723
Q gi|254780256|r 100 HCRGRQRIGRIVRPFSRLTVIVREVSDE 127 (131)
Q Consensus 100 ~prarGRa~~i~k~~sHi~VvL~e~~~~ 127 (131)
+||||||+++|+||+|||+|+|+|.+++
T Consensus 83 ~prarGRa~~i~k~~sHi~vvL~E~~~p 110 (110)
T 2ftc_M 83 RYHGRGRFGIMEKVYCHYFVKLVEGPPP 110 (110)
T ss_pred CCCCCCCCCCCCCCCCCEEEEEEECCCC
T ss_conf 9875888886468731189999827999