HHsearch results for GI: 254780256 and protein with PDBid: 2wwb_I
>2wwb_I 60S ribosomal protein L17-A; ribosome, protein EXIT tunnel, cotranslational protein translocation, protein conducting channel; 6.48A {Triticum aestivum} PDB: 2wwa_I 2ww9_I 1s1i_N
Probab=100.00 E-value=7.5e-37 Score=236.65 Aligned_cols=119 Identities=28% Similarity=0.254 Sum_probs=111.2
Q ss_pred HHHHHHHHEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHH--------------------------------HCCC
Q ss_conf 67421011231121487508899999999847986999998886--------------------------------5820
Q gi|254780256|r 8 SKRRMGDNEANAIASMLRVSPQKLNLVAAMIRGKRVSDALADLE--------------------------------FSRK 55 (131)
Q Consensus 8 ~~~~~~~~e~~A~~k~ir~Sp~K~r~va~~IrG~~v~eAl~~L~--------------------------------f~~k 55 (131)
.....+++.++|.++|+|+||+|+++||++||||++++|+.+|+ |.|+
T Consensus 6 ~~~~~~~k~akA~~~~lriS~Kk~r~va~~IrG~~v~~A~~~L~~V~~kK~~Vpf~r~~~~vg~~~~~~~~g~~~gr~P~ 85 (184)
T 2wwb_I 6 ATSTNPAKSASARGSYLRVSFKNTRETAQAINGWELTKAQKYLEQVLDHQRAIPFRRFNSSIGRTAQGKEFGVTKARWPA 85 (184)
T ss_dssp SCCCCGGGEEEEEEEEESSCHHHHHHHHHHSCSSCHHHHHHHHHHHHHTSCSCCCSSCCCCSSCCCCSCCSSCCCCCCCT
T ss_pred CCCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEEEEECCCCCCHHHHHHCCCCCCCCCH
T ss_conf 68789981289954887246699999999987984999999999987500420367761765634566641887774857
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEEEECCCCEEEEEEECCCCCCCCEECCCCEEEEEEEECCCC
Q ss_conf 247999999999999998405998233699999988981142010256666372017850089999851723
Q gi|254780256|r 56 RIAGEVRKTLCSAVANAENNHDLDVDRLIVSEAYVGKSVFMKRFHCRGRQRIGRIVRPFSRLTVIVREVSDE 127 (131)
Q Consensus 56 k~A~~i~k~L~SA~aNA~~n~~ld~~~L~I~~~~v~~G~~~KR~~prarGRa~~i~k~~sHi~VvL~e~~~~ 127 (131)
++|.+|.|+|+||.+||++ .|+|+|+|||+++|||+||++||++|||+||++++++++|||+|||+|.++.
T Consensus 86 kaa~~i~KlL~sa~aNA~~-~~ld~~~L~I~~i~v~~G~~~KR~~pRA~GRa~~i~k~~~HI~ivl~e~~~~ 156 (184)
T 2wwb_I 86 KSVKFVQGLLQNAAANAEA-KGLDATKLYVSHIQVNQAPKQRRRTYRAHGRINKYESSPSHIELVVTEKEEA 156 (184)
T ss_dssp HHHHHHHHHHHHHHHHTTS-SCCCSSCCCEEEEEEECCCCEEEEEEEETTEEEEEEECCEEEEEEEECC---
T ss_pred HHHHHHHHHHHHHHHHHHH-CCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCC
T ss_conf 8999999999999987651-1367324399999988885336767123568886038974489999737644