HHsearch results for GI: 254780256 and protein with PDBid: 3ofq_S
>3ofq_S 50S ribosomal protein L22; protein biosynthesis, ribosomes, RNA, tRNA, transfer, antibi EXIT, peptidyl, ribosomal subunit, large; 3.10A {Escherichia coli} PDB: 1p85_Q 1p86_Q 1vs8_S 1vs6_S 2aw4_S 2awb_S 1vt2_S 2i2v_S 2j28_S 2i2t_S* 2qao_S* 2qba_S* 2qbc_S* 2qbe_S 2qbg_S 2qbi_S* 2qbk_S* 2qov_S 2qox_S 2qoz_S* ...
Probab=100.00 E-value=7.1e-41 Score=260.38 Aligned_cols=110 Identities=42% Similarity=0.523 Sum_probs=107.9
Q ss_pred HEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEEEECCCC
Q ss_conf 12311214875088999999998479869999988865820247999999999999998405998233699999988981
Q gi|254780256|r 15 NEANAIASMLRVSPQKLNLVAAMIRGKRVSDALADLEFSRKRIAGEVRKTLCSAVANAENNHDLDVDRLIVSEAYVGKSV 94 (131)
Q Consensus 15 ~e~~A~~k~ir~Sp~K~r~va~~IrG~~v~eAl~~L~f~~kk~A~~i~k~L~SA~aNA~~n~~ld~~~L~I~~~~v~~G~ 94 (131)
+|++|.++|+|+||+|+|+|+++|||++|+||++||+|+|+++|..|.|+|+||++||++++|+|+|+|||.++|||+||
T Consensus 1 me~~A~~k~~r~SpkK~r~va~~IRG~~v~~Al~~L~f~~~k~a~~i~k~l~sA~anA~~~~~~d~~~L~I~~~~v~~G~ 80 (110)
T 3ofq_S 1 METIAKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAVLVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGP 80 (110)
T ss_dssp CCCEEEESSCSSCHHHHHHHHTTSSSSCSSSTTTTTTTCCSGGGGTTHHHHHHHHHHHHSSSCCCGGGCCCCCEEEECCC
T ss_pred CEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEEEECCCC
T ss_conf 95899838863287999999999869929999999865871108999999999999877512477030199999979986
Q ss_pred EEEEEEECCCCCCCCEECCCCEEEEEEEEC
Q ss_conf 142010256666372017850089999851
Q gi|254780256|r 95 FMKRFHCRGRQRIGRIVRPFSRLTVIVREV 124 (131)
Q Consensus 95 ~~KR~~prarGRa~~i~k~~sHi~VvL~e~ 124 (131)
++|||+||||||++++++|+|||+|+|+|.
T Consensus 81 ~~KR~~prarGRa~~i~k~~sHi~vvL~Ek 110 (110)
T 3ofq_S 81 SMKRIMPRAKGRADRILKRTSHITVVVSDR 110 (110)
T ss_dssp CEECCEECGGGCEECCEECCCEEEEECCCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEEEECC
T ss_conf 304768962588885237861489999269