HHSEARCH alignment of GI: 254780256 and SCOP domain: d2gycq1

Alignment

Probab=100.00  E-value=4.8e-41  Score=260.02  Aligned_cols=106  Identities=42%  Similarity=0.546  Sum_probs=104.1

Q ss_pred             EECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEEEEECCCCEEEE
Q ss_conf             12148750889999999984798699999888658202479999999999999984059982336999999889811420
Q gi|254780256|r   19 AIASMLRVSPQKLNLVAAMIRGKRVSDALADLEFSRKRIAGEVRKTLCSAVANAENNHDLDVDRLIVSEAYVGKSVFMKR   98 (131)
Q Consensus        19 A~~k~ir~Sp~K~r~va~~IrG~~v~eAl~~L~f~~kk~A~~i~k~L~SA~aNA~~n~~ld~~~L~I~~~~v~~G~~~KR   98 (131)
                      |.+||+|+||+|+++|+++|||++|+||+.||+|+|+++|.+|.|+|+||++||++++|+|+|+|||+++|||+||++||
T Consensus         1 A~~k~ir~Sp~K~r~va~~IrG~~v~~A~~~L~f~~kkaa~~i~k~l~sA~aNA~~~~~~d~~~L~I~~~~v~~G~~~KR   80 (106)
T d2gycq1           1 AKHRHARSSAQKVRLVADLIRGKKVSQALDILTYTNKKAAVLVKKVLESAIANAEHNDGADIDDLKVTKIFVDEGPSMKR   80 (106)
T ss_dssp             CCCCCCCCCSSSSCSSSSSSSSSCSHHHHSSSSSCCSSTTSSTTTSSSSSSTTTSTTTTCCTTTEEECCCCCCCCCBCCC
T ss_pred             CCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHEEEEEEECCCCCCCC
T ss_conf             98674615879999999998699199999997359951144899999999999997259997993888999899872457


Q ss_pred             EEECCCCCCCCEECCCCEEEEEEEEC
Q ss_conf             10256666372017850089999851
Q gi|254780256|r   99 FHCRGRQRIGRIVRPFSRLTVIVREV  124 (131)
Q Consensus        99 ~~prarGRa~~i~k~~sHi~VvL~e~  124 (131)
                      |+||||||+++|++|+|||+|+|+|.
T Consensus        81 ~~~rarGRa~~i~k~~sHi~vvL~Ek  106 (106)
T d2gycq1          81 IMPRAKGRADRILKRTSHITVVVSDR  106 (106)
T ss_dssp             BCCCTTTCCCBCCCBCCCCCCCEEEC
T ss_pred             CCCCCCCCCCCCCCCCCCEEEEEECC
T ss_conf             59762677776337874589998169

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ribosomal protein L22
superfamily: Ribosomal protein L22
family: Ribosomal protein L22
domain: Ribosomal protein L22
species: Escherichia coli [TaxId: 562]