HHsearch alignment for GI: 254780257 and conserved domain: KOG0898

Probab=99.94  E-value=1.1e-28  Score=185.25  Aligned_cols=84  Identities=35%  Similarity=0.564  Sum_probs=73.2

Q ss_pred             CCCCCCCCCCCCHHHHHHHHH----HHCCCCCCEEEEEECCCEECCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCC
Q ss_conf             977877675625899999998----6216898359875037478102226489997086268999852511010125336
Q gi|254780257|r    1 MARSVRKGPFVTKSLLKKVSQ----ARDSGGRGVVRVWCRNCDIMPQFIGLTFGVYNGRKHVPVSVSEEMVGFKLGDFAP   76 (92)
Q Consensus         1 MsRS~~Kgpfv~~~L~~ki~~----~~~~~~~~~IkT~sR~s~IlP~~vg~~i~VyNGk~f~~v~I~~~MVGhklGEFa~   76 (92)
T Consensus        52 ~~RGL~~k~~---~liKklrkAkk~A~~~ekpe~VkTHlR~mII~PEMvGs~VGVyNGK~FnqvEiKPEMIGhYL~eFsi  128 (152)
T KOG0898          52 LNRGLTRKPH---SLIKKLRKAKKEAPPMEKPEVVKTHLRNMIIVPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSI  128 (152)
T ss_pred             HHCCCCCCHH---HHHHHHHHHHHHCCCCCCCHHHHHHHHCCEEEHHHHCCEEEEECCCCCCEEECCHHHHHHHHHHCCC
T ss_conf             9722122337---9999999887516964472789987631265086626357776175233133147887555411033


Q ss_pred             CCCCCCCCCCC
Q ss_conf             43635766665
Q gi|254780257|r   77 TRHCPGHGSDK   87 (92)
Q Consensus        77 TRk~~~H~~~k   87 (92)
T Consensus       129 TykpvkHgrpg  139 (152)
T KOG0898         129 TYKPVKHGRPG  139 (152)
T ss_pred             CCCCCCCCCCC
T ss_conf             22434367888