HHsearch alignment for GI: 254780257 and conserved domain: PRK00357

>PRK00357 rpsS 30S ribosomal protein S19; Reviewed.
Probab=100.00  E-value=4.7e-43  Score=267.53  Aligned_cols=92  Identities=62%  Similarity=1.043  Sum_probs=90.3

Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCEECCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf             97787767562589999999862168983598750374781022264899970862689998525110101253364363
Q gi|254780257|r    1 MARSVRKGPFVTKSLLKKVSQARDSGGRGVVRVWCRNCDIMPQFIGLTFGVYNGRKHVPVSVSEEMVGFKLGDFAPTRHC   80 (92)
Q Consensus         1 MsRS~~Kgpfv~~~L~~ki~~~~~~~~~~~IkT~sR~s~IlP~~vg~~i~VyNGk~f~~v~I~~~MVGhklGEFa~TRk~   80 (92)
T Consensus         1 MsRS~~KgPfv~~~LlkKi~~~~~~~~k~~Ikt~sR~s~IlP~~vG~t~~VhNGk~fv~v~I~~~MvGhklGEFa~TRk~   80 (92)
T PRK00357          1 MPRSLKKGPFVDDHLLKKVEKANESGDKKVIKTWSRRSTILPDFIGLTIAVHNGRKHVPVYVTENMVGHKLGEFAPTRTF   80 (92)
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCEECHHHCCCEEEEECCCEEEEEEECCCCCCCEEECCCCCCCC
T ss_conf             98755558363889999999987247984058853577978678187899976980587885736137121110034255


Q ss_pred             CCCCCCCCCCCC
Q ss_conf             576666531259
Q gi|254780257|r   81 PGHGSDKKAKRK   92 (92)
Q Consensus        81 ~~H~~~kk~k~k   92 (92)
T Consensus        81 ~~H~~~~k~~rk   92 (92)
T PRK00357         81 RGHAADKKAKRK   92 (92)
T ss_pred             CCCCCCCCCCCC
T ss_conf             566776544579