HHsearch results for GI: 254780257 and protein with PDBid: 2zkq_s
>2zkq_s 40S ribosomal protein S15E; protein-RNA complex, 40S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=99.97 E-value=1.1e-32 Score=206.84 Aligned_cols=88 Identities=32% Similarity=0.515 Sum_probs=78.6
Q ss_pred CCCCCCCCCCC-HHHHHHHHHHHC----CCCCCEEEEEECCCEECCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCC
Q ss_conf 77877675625-899999998621----6898359875037478102226489997086268999852511010125336
Q gi|254780257|r 2 ARSVRKGPFVT-KSLLKKVSQARD----SGGRGVVRVWCRNCDIMPQFIGLTFGVYNGRKHVPVSVSEEMVGFKLGDFAP 76 (92)
Q Consensus 2 sRS~~Kgpfv~-~~L~~ki~~~~~----~~~~~~IkT~sR~s~IlP~~vg~~i~VyNGk~f~~v~I~~~MVGhklGEFa~ 76 (92)
-||+.+|.... .+|++++.+++. ++++++|+||+|+|+|+|+|||++|+||||++|++|+|+||||||||||||+
T Consensus 42 RR~l~RGl~~~~~~Ll~klrk~k~~~~~~~k~~~ikTh~R~~~IlP~mvG~~i~V~NGk~f~~v~I~~eMiGh~lGEFa~ 121 (145)
T 2zkq_s 42 RRRLNRGLRRKQHSLLKRLRKAKKEAPPMEKPEVVKTHLRDMIILPEMVGSMVGVYNGKTFNQVEIKPEMIGHYLGEFSI 121 (145)
T ss_dssp -CCCCSSBCCCTHHHHHHHHHHHHHSSTTCCCSCEEECCTTCBCCTTTTTSEEEEECSSCEEEEECCTTTTTSBSSSSSC
T ss_pred HHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCEECHHHCCCEEEEECCCCEEEEEECCCEECEEECCCCC
T ss_conf 87763699888999999999998642034788538995367533753558389994387326677255811314114567
Q ss_pred CCCCCCCCCCCCC
Q ss_conf 4363576666531
Q gi|254780257|r 77 TRHCPGHGSDKKA 89 (92)
Q Consensus 77 TRk~~~H~~~kk~ 89 (92)
||+++.||+..-+
T Consensus 122 Trk~v~Hg~pGvG 134 (145)
T 2zkq_s 122 TYKPVKHGRPGIG 134 (145)
T ss_dssp CSCCCCCCC----
T ss_pred CCCCCCCCCCCCC
T ss_conf 7577536899868