HHsearch results for GI: 254780257 and protein with PDBid: 3i1m_S
>3i1m_S 30S ribosomal protein S19; ribosome structure, protein-RNA complex, ribonucleoprotein, ribosomal protein, RNA-binding, rRNA-binding, antibiotic resistance; 3.19A {Escherichia coli k-12} PDB: 1vs7_S* 3e1a_L 3e1c_L 1vs5_S 3i1o_S 3i1q_S 3i1s_S 3i1z_S 3i21_S 3kc4_S 2qal_S* 1p6g_S 1p87_S 2aw7_S 2avy_S 2i2u_S 2i2p_S* 2qan_S* 2qb9_S* 2qbb_S* ...
Probab=100.00 E-value=9.9e-44 Score=270.14 Aligned_cols=92 Identities=58% Similarity=0.974 Sum_probs=90.1
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEECCCEECCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 97787767562589999999862168983598750374781022264899970862689998525110101253364363
Q gi|254780257|r 1 MARSVRKGPFVTKSLLKKVSQARDSGGRGVVRVWCRNCDIMPQFIGLTFGVYNGRKHVPVSVSEEMVGFKLGDFAPTRHC 80 (92)
Q Consensus 1 MsRS~~Kgpfv~~~L~~ki~~~~~~~~~~~IkT~sR~s~IlP~~vg~~i~VyNGk~f~~v~I~~~MVGhklGEFa~TRk~ 80 (92)
||||+|||||++++|+++++++++.+.+++|+||||+|+|+|+|||++|+||||++|++|+|+||||||||||||+||++
T Consensus 1 MsRS~~Kgpfv~~~Llkki~k~~~~~~~~~ikT~sR~s~IlP~~VG~ti~VyNGk~fv~v~I~~eMIGhklGEFa~Trk~ 80 (92)
T 3i1m_S 1 MPRSLKKGPFIDLHLLKKVEKAVESGDKKPLRTWSRRSTIFPNMIGLTIAVHNGRQHVPVFVTDEMVGHKLGEFAPTRTY 80 (92)
T ss_dssp --CCCCSSCCCCHHHHHHHHHHHHTCCCSCCEECCTTCBCCGGGSSCCCEEECSSSEEECCCCTTCCSSBGGGSSCCCCC
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCEECHHHHCCEEEEECCCEEEEEEECCCCCCEEEECCCCCCCC
T ss_conf 98756548362789999999988527997448855787976577265899865970476886757125244501343255
Q ss_pred CCCCCCCCCCCC
Q ss_conf 576666531259
Q gi|254780257|r 81 PGHGSDKKAKRK 92 (92)
Q Consensus 81 ~~H~~~kk~k~k 92 (92)
+.|++++|+++|
T Consensus 81 ~~H~~~kk~~~k 92 (92)
T 3i1m_S 81 RGHAADKKAKKK 92 (92)
T ss_dssp C-----------
T ss_pred CCCCCCCCCCCC
T ss_conf 556787644579