HHsearch alignment for GI: 254780259 and conserved domain: COG0089
>COG0089 RplW Ribosomal protein L23 [Translation, ribosomal structure and biogenesis].
Probab=99.97 E-value=4.2e-31 Score=200.32 Aligned_cols=93 Identities=53% Similarity=0.695 Sum_probs=85.3
Q ss_pred HHHHHHHCCCCHHHHHHHH-CCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCEEEECCCCCCCCCCCCCCCC
Q ss_conf 7867600320799888864-890999988878988999999999687433789985189633311224664432234544
Q gi|254780259|r 6 FYDTIISPVIAEKSTLLAG-QNQVVFNVKKDSSKSEIKSAVEALFSVKVVSVNTLIRKGKVKRLSRISAARSRVRSSRDM 84 (110)
Q Consensus 6 ~~~vi~~P~~TEKs~~~~e-~n~y~F~V~~~atK~eIK~ave~~f~V~V~~Vnt~~~~gK~Kr~~r~~g~k~~~~~~r~~ 84 (110)
T Consensus 1 ~~dvI~~PvvTEKa~~l~~~~nk~vF~V~~~AtK~~IK~AvE~lF~VkV~kVNTl~~k~k~KR~~~------------k~ 68 (94)
T COG0089 1 LYDVIKSPVVTEKAMLLMEKENKYVFIVDPDATKPEIKAAVEELFGVKVEKVNTLNTKGKTKRAGV------------KR 68 (94)
T ss_pred CCCHHHCCCCCHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCEEEEEEEEEECCCCEEEEC------------CC
T ss_conf 922444350058789767557879999989899799999999985987788887872896038840------------35
Q ss_pred CCCCCCCEEEEEECCCCCEECCCCCC
Q ss_conf 43458813899995899731332489
Q gi|254780259|r 85 YVSRKDVKRAFVTLAKGYSIDISAGV 110 (110)
Q Consensus 85 ~~k~~~~KKAiVtL~~G~~I~~~~gi 110 (110)
T Consensus 69 ~G~~~~~kka~V~l~~G~~i~~~~~~ 94 (94)
T COG0089 69 IGLRKDYKKAYVTLKEGQSIDFFGGA 94 (94)
T ss_pred CCCCCCCCEEEEECCCCCEEEECCCC
T ss_conf 66376342047982689687612369