HHsearch alignment for GI: 254780259 and conserved domain: PTZ00191
>PTZ00191 60S ribosomal protein L23a; Provisional.
Probab=99.87 E-value=2.4e-22 Score=149.81 Aligned_cols=81 Identities=33% Similarity=0.523 Sum_probs=71.4
Q ss_pred CCCHHHHHHHHCCCCHHHHHHHH-CCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCEEEECCCCCCCCCCCC
Q ss_conf 85257867600320799888864-89099998887898899999999968743378998518963331122466443223
Q gi|254780259|r 2 INIRFYDTIISPVIAEKSTLLAG-QNQVVFNVKKDSSKSEIKSAVEALFSVKVVSVNTLIRKGKVKRLSRISAARSRVRS 80 (110)
Q Consensus 2 ~~~~~~~vi~~P~~TEKs~~~~e-~n~y~F~V~~~atK~eIK~ave~~f~V~V~~Vnt~~~~gK~Kr~~r~~g~k~~~~~ 80 (110)
T Consensus 63 ~klD~y~IIk~PltTEkAmkkiEd~NtLvFiVd~kAnK~qIK~AVekLydV~V~kVNTli~p~----------------- 125 (150)
T PTZ00191 63 KKLDKFNIIRYPLTTEKAMKKIEENNTLVFIVDSRANKTQIKKAVSKLYEVKVVKVNTLITPD----------------- 125 (150)
T ss_pred CCCCCCEEEECCCCCHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCEECEEEEEECCC-----------------
T ss_conf 788730255157568899999986587999978858989999999998398106686558689-----------------
Q ss_pred CCCCCCCCCCCEEEEEECCCCC-EECCCC
Q ss_conf 4544434588138999958997-313324
Q gi|254780259|r 81 SRDMYVSRKDVKRAFVTLAKGY-SIDISA 108 (110)
Q Consensus 81 ~r~~~~k~~~~KKAiVtL~~G~-~I~~~~ 108 (110)
T Consensus 126 ---------G~KKAyV~L~~d~dAlDvAn 145 (150)
T PTZ00191 126 ---------GLKKAYIRLSPDHDALDVAN 145 (150)
T ss_pred ---------CCEEEEEECCCCCCHHHHHH
T ss_conf ---------97789997799998999988