HHsearch alignment of GI: 254780259 and MMDB domain: 2zkr_s_
>2zkr_s (s:) 60S ribosomal protein L23A; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=99.94 E-value=9.5e-28 Score=180.61 Aligned_cols=84 Identities=33% Similarity=0.523 Sum_probs=77.2
Q ss_pred CCCCHHHHHHHHCCCCHHHHHHHH-CCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCEEEECCCCCCCCCCC
Q ss_conf 985257867600320799888864-8909999888789889999999996874337899851896333112246644322
Q gi|254780259|r 1 MINIRFYDTIISPVIAEKSTLLAG-QNQVVFNVKKDSSKSEIKSAVEALFSVKVVSVNTLIRKGKVKRLSRISAARSRVR 79 (110)
Q Consensus 1 m~~~~~~~vi~~P~~TEKs~~~~e-~n~y~F~V~~~atK~eIK~ave~~f~V~V~~Vnt~~~~gK~Kr~~r~~g~k~~~~ 79 (110)
|+.|++||+|++|++||||+.+.| +|+|+|.||.+|||+||++|||++|+|+|.+|||++.++
T Consensus 68 ~~~~d~y~iIk~Pl~TEka~~~~E~nntlvFiVd~~AnK~qIK~AVe~lf~VkV~kVNTl~~~~---------------- 131 (156)
T 2zkr_s 68 RNKLDHYAIIKFPLTTESAMKKIEDNNTLVFIVDVKANKHQIKQAVKKLYDIDVAKVNTLIRPD---------------- 131 (156)
T ss_dssp --------CEEEECCSHHHHHHHHHHCEEEEEECTTCCHHHHHHHHHHHHCCCEEEEEEEECSS----------------
T ss_pred CCCCCHHHEEECCCCHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCC----------------
T ss_conf 6778864555526441546998742562799847878989999999998198102788757489----------------
Q ss_pred CCCCCCCCCCCCEEEEEECCCCC-EECCCCCC
Q ss_conf 34544434588138999958997-31332489
Q gi|254780259|r 80 SSRDMYVSRKDVKRAFVTLAKGY-SIDISAGV 110 (110)
Q Consensus 80 ~~r~~~~k~~~~KKAiVtL~~G~-~I~~~~gi 110 (110)
+||||||+|++|+ .||++++|
T Consensus 132 ----------g~KKA~V~L~~~~daldvankI 153 (156)
T 2zkr_s 132 ----------GEKKAYVRLAPDYDALDVANKI 153 (156)
T ss_dssp ----------SCEEEEEEECTTSCHHHHHHHC
T ss_pred ----------CCEEEEEEECCCCCHHHHHHCC
T ss_conf ----------9368999968997289997502