HHsearch alignment of GI: 254780259 and MMDB domain: 3bbo_V_
>3bbo_V (V:) Ribosomal protein L23; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=99.92 E-value=1.1e-26 Score=174.49 Aligned_cols=80 Identities=33% Similarity=0.502 Sum_probs=72.4
Q ss_pred CCCHHHHHHHHCCCCHHHHHHHHC-CEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCEEEECCCCCCCCCCCC
Q ss_conf 852578676003207998888648-9099998887898899999999968743378998518963331122466443223
Q gi|254780259|r 2 INIRFYDTIISPVIAEKSTLLAGQ-NQVVFNVKKDSSKSEIKSAVEALFSVKVVSVNTLIRKGKVKRLSRISAARSRVRS 80 (110)
Q Consensus 2 ~~~~~~~vi~~P~~TEKs~~~~e~-n~y~F~V~~~atK~eIK~ave~~f~V~V~~Vnt~~~~gK~Kr~~r~~g~k~~~~~ 80 (110)
+.|++|+||++|++||||+.+.|+ |+|+|.||.+|||+|||+|||++|+|+|.+|||+++++
T Consensus 107 ~~ld~~~IIk~Pl~TEKa~k~iEdnNtlvFiVd~kANK~qIK~AVekLydVkV~kVNTli~p~----------------- 169 (198)
T 3bbo_V 107 RILDVYQILQSPIITEAAIKNIADENSLLFTVDVRADKKMIREAISNFFGVKVRKVNTLIRPD----------------- 169 (198)
T ss_dssp ---CCCCCBCCCCCCHHHHHHHHTSCEECCEECTTCCHHHHHHTTTTTSCCCEEECCCEEETT-----------------
T ss_pred HHCCHHHEEECCCCCHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCC-----------------
T ss_conf 007875640015217888998987786999989999989999999998298013798657389-----------------
Q ss_pred CCCCCCCCCCCEEEEEECCCCCEECCC
Q ss_conf 454443458813899995899731332
Q gi|254780259|r 81 SRDMYVSRKDVKRAFVTLAKGYSIDIS 107 (110)
Q Consensus 81 ~r~~~~k~~~~KKAiVtL~~G~~I~~~ 107 (110)
+||||||+|++|++++++
T Consensus 170 ---------g~KKA~V~La~d~~aldv 187 (198)
T 3bbo_V 170 ---------GTKKAYIMLNKEYNASEL 187 (198)
T ss_dssp ---------TEEECCEEECTTTCTTTH
T ss_pred ---------CCEEEEEEECCCCCHHHH
T ss_conf ---------927899996899847888