HHSEARCH alignment of GI: 254780259 and SCOP domain: d2zjrq1

Alignment
>d2zjrq1 d.12.1.1 (Q:2-94) Ribosomal protein L23 {Deinococcus radiodurans [TaxId: 1299]}
Probab=100.00  E-value=3.3e-35  Score=221.34  Aligned_cols=92  Identities=38%  Similarity=0.554  Sum_probs=86.5

Q ss_pred             HHHHHHHHCCCCHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCEEEECCCCCCCCCCCCCCCC
Q ss_conf             57867600320799888864890999988878988999999999687433789985189633311224664432234544
Q gi|254780259|r    5 RFYDTIISPVIAEKSTLLAGQNQVVFNVKKDSSKSEIKSAVEALFSVKVVSVNTLIRKGKVKRLSRISAARSRVRSSRDM   84 (110)
Q Consensus         5 ~~~~vi~~P~~TEKs~~~~e~n~y~F~V~~~atK~eIK~ave~~f~V~V~~Vnt~~~~gK~Kr~~r~~g~k~~~~~~r~~   84 (110)
                      .|||+|++|++||||+.+.|+|+|+|.|+++|||+|||+|||++|+|+|.+|||+|.+||.||++++             
T Consensus         1 ~~ydvi~~P~iTEKs~~~~e~n~y~F~V~~~atK~~Ik~ave~lf~VkV~~Vnt~~~~gK~kr~~~~-------------   67 (93)
T d2zjrq1           1 SHYDILQAPVISEKAYSAMERGVYSFWVSPKATKTEIKDAIQQAFGVRVIGISTMNVPGKRKRVGRF-------------   67 (93)
T ss_dssp             CCSSSCCEECCTHHHHHHHTTTCCEEEECSSCTHHHHHHHHHHHHCCCCSEEEECCBCCCCCSSSSC-------------
T ss_pred             CCCCEEEECCCCHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHCCCCEEEEEEEEECCCCEEECCC-------------
T ss_conf             9633886032088787777799799998087898999999999819875899989817972377994-------------


Q ss_pred             CCCCCCCEEEEEECCCCCEECCCCC
Q ss_conf             4345881389999589973133248
Q gi|254780259|r   85 YVSRKDVKRAFVTLAKGYSIDISAG  109 (110)
Q Consensus        85 ~~k~~~~KKAiVtL~~G~~I~~~~g  109 (110)
                      .|++++||||||||++|++||||+|
T Consensus        68 ~g~~~~~KKAiVtL~~g~~I~~~~g   92 (93)
T d2zjrq1          68 IGQRNDRKKAIVRLAEGQSIEALAG   92 (93)
T ss_dssp             CCCCCCBEEEEEECCSSCCCSSTTT
T ss_pred             CEECCCCEEEEEECCCCCCCCCCCC
T ss_conf             3403897899999689694031489


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Ribosomal proteins S24e, L23 and L15e
superfamily: Ribosomal proteins S24e, L23 and L15e
family: L23p
domain: Ribosomal protein L23
species: Deinococcus radiodurans [TaxId: 1299]