PSIBLAST alignment of GI: 254780259 and protein with PDB id: 1pnu
>gi|34811571|pdb|1PNU|R Chain R, Crystal Structure Of A Streptomycin Dependent Ribosome From Escherichia Coli, 50s Subunit Of 70s Ribosome. This File, 1pnu, Contains Only Molecules Of The 50s Ribosomal Subunit. The 30s Subunit, Mrna, P-Site Trna, And A-Site Trna Are In The Pdb File 1pns. Length = 93
>gi|34811624|pdb|1PNY|R Chain R, Crystal Structure Of The Wild Type Ribosome From E. Coli, 50s Subunit Of 70s Ribosome. This File, 1pny, Contains Only Molecules Of The 50s Ribosomal Subunit. The 30s Subunit Is In The Pdb File 1pnx. Length = 93
Score = 106 bits (266), Expect = 9e-22, Method: Composition-based stats.
Identities = 35/104 (33%), Positives = 54/104 (51%), Gaps = 13/104 (12%)
Query: 6 FYDTIISPVIAEKSTLLAGQNQVVFNVKKDSSKSEIKSAVEALFSVKVVSVNTLIRKGKV 65
YD + +PVI+EK+ + F V ++K+EIK A++ F V+V+ ++T+ GK
Sbjct: 2 HYDILQAPVISEKAYSAMERGVYSFWVSPKATKTEIKDAIQQAFGVRVIGISTMNVPGKR 61
Query: 66 KRLSRISAARSRVRSSRDMYVSRKDVKRAFVTLAKGYSIDISAG 109
KR+ R R D K+A V LA+G SI+ AG
Sbjct: 62 KRVGRFIG-------------QRNDRKKAIVRLAEGQSIEALAG 92