HHsearch alignment of GI: 254780260 and MMDB domain: 2zkr_c_29-146
>2zkr_c (c:29-146) 60S ribosomal protein L4; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=100.00 E-value=1.1e-39 Score=245.41 Aligned_cols=108 Identities=15% Similarity=0.028 Sum_probs=99.4
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCC-----CCCCCCCHHHCCCCCCCCC---CCCCCCCCCCC-CCCCCCCCCCCCCCCCC-
Q ss_conf 98766899999999999727886-----2001362121489887645---58875542365-31110105774227787-
Q gi|254780260|r 25 ALKPQQGILARVLRWQSWRKRIG-----CSKSKGRSEVAYTGSKMYV---QKGTGRARHSS-KSVSQFRGGGKAFGPVP- 94 (207)
Q Consensus 25 ~~~~~~~li~~~v~~~~~~~R~g-----ta~tk~r~ev~gs~kK~~~---QKGtGrAR~Gs-~rsp~~rgGg~afgp~p- 94 (207)
.+|+|.||||++|+||++|+||| ||+||+|+||+|||+|||+ |||||+||+|+ .++|+|||||+||||+|
T Consensus 1 ~~~~r~dii~~~v~~~~~~~Rqg~~~~~~a~~k~raev~gsgrk~~K~~rqKGtG~AR~G~~~~sP~~~gGg~ahgpk~~ 80 (118)
T 2zkr_c 1 KAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTW 80 (118)
T ss_dssp GSCCCHHHHHHHHHHHHHTTCCCCCCCSCTTTCSCCCCCCSSSSSCCSCCBTTTTBCCCSTTCCTTSTTCCCCSSCCCSS
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCC
T ss_conf 89887899999999999855676677765576221365378888463665259987455555568722577231689975
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC
Q ss_conf 532000015999999999878765059589951433787
Q gi|254780260|r 95 IIGVHALPKKVRSLALRHALSDKFCSNDIMVIDNLVSKE 133 (207)
Q Consensus 95 r~~~~klnkK~~~lAl~saLs~k~~~~~l~Vvd~~~~~~ 133 (207)
++|+++||||++++|+++|||.++.+ .+++||+|.+++
T Consensus 81 r~~~~klnkK~r~lAl~sALs~k~~~-~lv~v~~~~~~e 118 (118)
T 2zkr_c 81 RRWHRRVNTTQKRYAICSALACLSLP-ALVMSKGHRIEE 118 (118)
T ss_dssp SCCCCCCCHHHHHHHHHHHHHHHTCH-HHHHHTTCCCCS
T ss_pred CCHHHHCCHHHHHHHHHHHHHHHCCH-HHHHHCCCCCCC
T ss_conf 43101218999999999999973252-443204741035