PSIBLAST alignment of GI: 254780260 and protein with PDB id: 1pnu
>gi|34811556|pdb|1PNU|C Chain C, Crystal Structure Of A Streptomycin Dependent Ribosome From Escherichia Coli, 50s Subunit Of 70s Ribosome. This File, 1pnu, Contains Only Molecules Of The 50s Ribosomal Subunit. The 30s Subunit, Mrna, P-Site Trna, And A-Site Trna Are In The Pdb File 1pns. Length = 197
>gi|34811609|pdb|1PNY|C Chain C, Crystal Structure Of The Wild Type Ribosome From E. Coli, 50s Subunit Of 70s Ribosome. This File, 1pny, Contains Only Molecules Of The 50s Ribosomal Subunit. The 30s Subunit Is In The Pdb File 1pnx Length = 197
Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats.
Identities = 69/203 (33%), Positives = 112/203 (55%), Gaps = 6/203 (2%)
Query: 2 IELSVRNLDGEDKGVISVSEDIFALKPQQGILARVLRWQSWRKRIGCSKSKGRSEVAYTG 61
+++V +G + + + G+L V+ WQ +R G + ++ R++V+ TG
Sbjct: 1 AQINVIGQNGGRTIELPLP------EVNSGVLHEVVTWQLASRRRGTASTRTRAQVSKTG 54
Query: 62 SKMYVQKGTGRARHSSKSVSQFRGGGKAFGPVPIIGVHALPKKVRSLALRHALSDKFCSN 121
KMY QKGTG ARH +SV F GGG AFGP P + LP++VR L L A++ +
Sbjct: 55 RKMYGQKGTGNARHGDRSVPTFVGGGVAFGPKPRSYDYTLPRQVRQLGLAMAIASRQEGG 114
Query: 122 DIMVIDNLVSKECKTKYLVTRFRALDLSNALIIDGCQLDRNFQLAARNIPNINLLPVQGI 181
++ +D + KTK ++ + L + D N + AARN+ +++LPV G+
Sbjct: 115 KLVAVDGFDIADAKTKNFISWAKQNGLDGTEKVLLVTDDENTRRAARNVSWVSVLPVAGV 174
Query: 182 NVYDILRCSKLVLSKSAIEALED 204
NVYDILR +LV+ +A+E +E+
Sbjct: 175 NVYDILRHDRLVIDAAALEIVEE 197