PSIBLAST alignment of GI: 254780260 and protein with PDB id: 2zkr

gi|187609301|pdb|2ZKR|CC Chain c, Structure Of A Mammalian Ribosomal 60s Subunit Within An 80s Complex Obtained By Docking Homology Models Of The Rna And Proteins Into An 8.7 A Cryo-Em Map Length = 421

 Score = 86.3 bits (212), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/258 (16%), Positives = 79/258 (30%), Gaps = 56/258 (21%)

Query: 4   LSVRNLDGEDKGV-ISVSEDIFALKPQQGILARVLRWQSWRKRIGC-----SKSKGRSEV 57
           +SV +  GE  G  +++   +F    +  I+  V        R        +  +  +E 
Sbjct: 8   ISVYSEKGESSGKNVTLP-AVFKAPIRPDIVNFVHTNLRKNNRQPYAVSELAGHQTSAES 66

Query: 58  AYTGS---KMYVQKGTGRARHSSKSVSQFRGGGKAFGPVP--IIGVHALPKKVRSLALRH 112
             TG    ++   +G G  R    +      GG+ F P          +    +  A+  
Sbjct: 67  WGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTWRRWHRRVNTTQKRYAICS 126

Query: 113 ----------ALSDKFCSNDI----MVIDNLVSKECKTKYLVTRFRALDLSNALIIDGC- 157
                      +S      ++    +V+++ V    KTK  V   + L   N +      
Sbjct: 127 ALACLSLPALVMSKGHRIEEVPELPLVVEDKVEGYKKTKEAVLLLKKLKAWNDIKKVYAS 186

Query: 158 -------------------------QLDRNFQLAARNIPNINLLPVQGINVYDILRCSKL 192
                                      D     A R  P I LL V  +N+  +     +
Sbjct: 187 QRMRAGKGKMRNRRRIQRRGPCIIYNEDNGIIKAFRKHPGITLLNVSKLNILKLAPGGHV 246

Query: 193 ----VLSKSAIEALEDRF 206
               + ++SA   L+D +
Sbjct: 247 GRFCIWTESAFRKLDDLY 264