PSIBLAST alignment of GI: 254780260 and protein with PDB id: 3d5b
>gi|209156522|pdb|3D5B|F Chain F, Structural Basis For Translation Termination On The 70s Ribosome. This File Contains The 50s Subunit Of One 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. Length = 210
>gi|209156576|pdb|3D5D|F Chain F, Structural Basis For Translation Termination On The 70s Ribosome. This File Contains The 50s Subunit Of The Second 70s Ribosome. The Entire Crystal Structure Contains Two 70s Ribosomes As Described In Remark 400. Length = 210
Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 5/205 (2%)
Query: 1 MIELSVRNLDGEDKGVISVSEDIFALKPQQGILARVLRWQSWRKRIGCSKSKGRSEVAYT 60
M ++ V + G + + + +L V+RWQ ++R G + +K R EVAY+
Sbjct: 6 MYQIPVLSPSGRRELAADLP-----AEINPHLLWEVVRWQLAKRRRGTASTKTRGEVAYS 60
Query: 61 GSKMYVQKGTGRARHSSKSVSQFRGGGKAFGPVPIIGVHALPKKVRSLALRHALSDKFCS 120
G K++ QK TGRARH F GGG FGP P + LPKKVR L A++D+
Sbjct: 61 GRKIWPQKHTGRARHGDIGAPIFVGGGVVFGPKPRDYSYTLPKKVRKKGLAMAVADRARE 120
Query: 121 NDIMVIDNLVSKECKTKYLVTRFRALDLSNALIIDGCQLDRNFQLAARNIPNINLLPVQG 180
+++++ KTK + + L + + + + AARN+P + L +G
Sbjct: 121 GKLLLVEAFAGVNGKTKEFLAWAKEAGLDGSESVLLVTGNELVRRAARNLPWVVTLAPEG 180
Query: 181 INVYDILRCSKLVLSKSAIEALEDR 205
+NVYDI+R +LV+ A E ++R
Sbjct: 181 LNVYDIVRTERLVMDLDAWEVFQNR 205