RPSBLAST alignment of GI: 254780260 and protein with PDBid: 1dmg

>1dmg_A Ribosomal protein L4; alpha-beta, ribosome, RNA, S10 operon; HET: CIT; 1.70A {Thermotoga maritima} SCOP: c.22.1.1 Length = 225

 Score =  141 bits (356), Expect = 1e-34
 Identities = 68/223 (30%), Positives = 116/223 (52%), Gaps = 19/223 (8%)

Query: 3   ELSVRNLDGEDKGVISVSEDIFALKPQQGILARVLRWQSWRKRIGCSKSKGRSEVAYTGS 62
           ++ + N+ GE  G + +S+ +F + P   ++ R +  Q   +R G + +K R EV+  G 
Sbjct: 2   QVDLLNVKGEKVGTLEISDFVFNIDPNYDVMWRYVDMQLSNRRAGTASTKTRGEVSGGGR 61

Query: 63  KMYVQKGTGRARHSSKSVSQFRGGGKAFGPVPIIGVHALPKKVRSLALRHALSDKFCSND 122
           K + QK TGRARH S     +R GG   GP P      L KK++ LALR ALS K+  N 
Sbjct: 62  KPWPQKHTGRARHGSIRSPIWRHGGVVHGPKPRDWSKKLNKKMKKLALRSALSVKYRENK 121

Query: 123 IMVIDNLVSKECKTKYLVTRFRALDLSN----ALIIDGCQLDRNFQLAARNIPNINLLP- 177
           ++V+D+L  +  KTK L    + L LS+     ++    +   N +L+ RN+P++ ++  
Sbjct: 122 LLVLDDLKLERPKTKSLKEILQNLQLSDKKTLIVLPWKEEGYMNVKLSGRNLPDVKVIIA 181

Query: 178 --------------VQGINVYDILRCSKLVLSKSAIEALEDRF 206
                         + G+NV+D+L+   LVL++  +  +E+  
Sbjct: 182 DNPNNSKNGEKAVRIDGLNVFDMLKYDYLVLTRDMVSKIEEVL 224