HHsearch alignment for GI: 254780261 and conserved domain: pfam00297

Probab=100.00  E-value=0  Score=543.61  Aligned_cols=195  Identities=41%  Similarity=0.645  Sum_probs=187.9

Q ss_pred             ECCCCEEECCC-CCEEEEEEEEECCCEEEEEEECCC--CCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEC
Q ss_conf             65845169889-879226899917978999970677--886125640555564315710112576403563410365320
Q gi|254780261|r    9 KLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDK--NGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRV   85 (221)
Q Consensus         9 KiGMT~if~e~-G~~vpVTViev~~~~Vv~~kt~ek--dGY~Avqvg~~~~k~k~~~Kp~~G~fkK~g~~pk~~l~Efrv   85 (221)
T Consensus         1 KiGMT~if~~~~G~~vPVTVle~~p~~V~~vkt~e~~~dGy~Avqlg~~~~k~~~~~K~~~gh~~k~~~~~k~~l~Efrv   80 (199)
T pfam00297         1 KAGMTHIFTEKKGVLEPVTVIEVPPMVVVQVKTYEETNDGYKAIQVGLESIKKYRVVKRVLGHTQKRGTPPKAHVMEFRV   80 (199)
T ss_pred             CCCCCEEECCCCCEEEEEEEEEECCCEEEEEEEEECCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEC
T ss_conf             99874077289998998899991896999998462079953543402032343355565666664326877720699961


Q ss_pred             CCCHHHHHCCCCEEE-EEECCCCEEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCC
Q ss_conf             651121100341000-1230253265789875343364057504421233357745434666555556752242267666
Q gi|254780261|r   86 QKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA  164 (221)
Q Consensus        86 ~~~~~~~~vG~~i~~-~~F~~Gq~VDV~g~SkGKGFqGviKR~gf~g~~~sHG~sk~hR~~GsiG~~~~PgRV~kGkkm~  164 (221)
T Consensus        81 ~~~~-~~~~G~~i~v~~~F~~Gq~VDV~g~skGKGFqGv~KR~gf~g~p~sHG-~~~hR~~GSiG~-~~PgRV~kgkkm~  157 (199)
T pfam00297        81 NGGE-EFEPGQTIAVSDVFREGEYVDVTGVTKGKGFQGVMKRWGFKRLPRKHG-RGYHRKPGSIGA-WHPGRVFPGVKMA  157 (199)
T ss_pred             CCHH-CCCCCCEEEHHHHCCCCCEEEEEEEECCCCCCCCEEECCCCCCCCCCC-CCCCCCCCCCCC-CCCCCEECCCCCC
T ss_conf             5333-045673887789336998899998745873566557767678997568-988878940489-8997531686247


Q ss_pred             CCCCCEEEEECCCEEEEEECCCCEEEEECCCCCCCCCEEEEEE
Q ss_conf             5237733365165899980768989997157458887099996
Q gi|254780261|r  165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVR  207 (221)
Q Consensus       165 G~mG~~~~T~~nl~i~~id~e~n~i~vkGsVPG~~~~~~v~ir  207 (221)
T Consensus       158 G~mG~~~~T~~Nl~V~~id~~~nli~vkGsVPG~-~~~~v~ir  199 (199)
T pfam00297       158 GQMGNHHRTEQNLKIYRIDQENNLLLVKGSVPGP-KKRLVTIR  199 (199)
T ss_pred             CCCCCCEEEEECCEEEEEECCCCEEEEEECCCCC-CCCEEEEC
T ss_conf             7559825988377999980879989998558579-99889869