HHsearch alignment of GI: 254780261 and MMDB domain: 2ftc_C_1-29_104-211
>2ftc_C (C:1-29,C:104-211) L3MT, MRP-L3, mitochondrial 39S ribosomal protein L3; mitochondrial ribosome, large ribosomal subunit, ribosomal RNA; 12.10A {Bos taurus}
Probab=100.00 E-value=0 Score=358.12 Aligned_cols=137 Identities=45% Similarity=0.679 Sum_probs=131.6
Q ss_pred CCCEEEEECCCCEEECCCCCEEEEEEEEECCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCEEE
Q ss_conf 44268996584516988987922689991797899997067788612564055556431571011257640356341036
Q gi|254780261|r 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLF 81 (221)
Q Consensus 2 r~Glig~KiGMT~if~e~G~~vpVTViev~~~~Vv~~kt~ekdGY~Avqvg~~~~k~k~~~Kp~~G~fkK~g~~pk~~l~ 81 (221)
|+||||.|+||+.+||.+|..+.|||||+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------------- 29 (137)
T 2ftc_C 1 RVGLIALKLGMMPLWTKDGQKHVVTLLQV--------------------------------------------------- 29 (137)
T ss_pred CEEEEEEECCCCEEECCCCCEEEEEEEEE---------------------------------------------------
T ss_conf 91899996377278889997988699997---------------------------------------------------
Q ss_pred EEECCCCHHHHHCCCCEEEEEECCCCEEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC
Q ss_conf 53206511211003410001230253265789875343364057504421233357745434666555556752242267
Q gi|254780261|r 82 EFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161 (221)
Q Consensus 82 Efrv~~~~~~~~vG~~i~~~~F~~Gq~VDV~g~SkGKGFqGviKR~gf~g~~~sHG~sk~hR~~GsiG~~~~PgRV~kGk 161 (221)
++||+|||+|+|||||||||||||||+++|+|||+|++||++||||+ ++|+|||||+
T Consensus 30 ----------------------~~Gq~VDV~g~TKGKGFqGviKRwgf~g~p~sHG~sk~hR~~GSiG~-~~pgRV~kgk 86 (137)
T 2ftc_C 30 ----------------------RPGQYVDVTAKTIGKGFQGVMKRWGFKGQPATHGQTKTHRRPGAVAT-GDIGRVWPGT 86 (137)
T ss_pred ----------------------ECCCEEEEEEEEECCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCEECC
T ss_conf ----------------------03205889999825456651010414537854235652002441212-5677422033
Q ss_pred CCCCCCCCEEEEECCCEEEEEECCCCEEEEECCCCCCCCCEEEEEEECCCCC
Q ss_conf 6665237733365165899980768989997157458887099996031467
Q gi|254780261|r 162 KMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213 (221)
Q Consensus 162 km~G~mG~~~~T~~nl~i~~id~e~n~i~vkGsVPG~~~~~~v~ir~a~k~~ 213 (221)
|||||||++++|++||+|++||+|+|||||||||||| ++++|+||||+|++
T Consensus 87 kmaGqmG~~~~T~~Nl~I~~i~~e~nliliKGsVPG~-~~~~v~ir~a~k~s 137 (137)
T 2ftc_C 87 KMPGKMGNIYRTEYGLKVWRINTKHNIIYVNGSVPGH-KNCLVKVKDSKLPA 137 (137)
T ss_pred CCCCCCCCEEEEEECCEEEEEECCCCEEEEEECCCCC-CCCEEEEEECCCCC
T ss_conf 1367327618988578999993879999996368589-99899997266589