HHsearch alignment of GI: 254780261 and MMDB domain: 2zjr_B_1-29_91-211

>2zjr_B (B:1-29,B:91-211) 50S ribosomal protein L3; ribosome, large ribosomal subunit, ribonucleoprotein, RNA-binding, rRNA-binding, tRNA-binding, methylation; 2.91A {Deinococcus radiodurans}
Probab=100.00  E-value=0  Score=376.27  Aligned_cols=148  Identities=45%  Similarity=0.719  Sum_probs=137.4

Q ss_pred             CCCEEEEECCCCEEECCCCCEEEEEEEEECCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCEEE
Q ss_conf             44268996584516988987922689991797899997067788612564055556431571011257640356341036
Q gi|254780261|r    2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLF   81 (221)
Q Consensus         2 r~Glig~KiGMT~if~e~G~~vpVTViev~~~~Vv~~kt~ekdGY~Avqvg~~~~k~k~~~Kp~~G~fkK~g~~pk~~l~   81 (221)
                      +.|++|.|+||||+|..| .++||||+-+                                                   
T Consensus         1 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---------------------------------------------------   28 (150)
T 2zjr_B            1 MKGILGTKIGMTQIWKND-RAIPVTVVLA---------------------------------------------------   28 (150)
T ss_dssp             CCEEEEEEEEEEEEEETT-EEEEEEEEEC---------------------------------------------------
T ss_pred             CCEEEEEECCCEEEEECC-CEEEEEEEEE---------------------------------------------------
T ss_conf             946989952560488699-9899899995---------------------------------------------------


Q ss_pred             EEECCCCHHHHHCCCCEEEEEECCCCEEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC
Q ss_conf             53206511211003410001230253265789875343364057504421233357745434666555556752242267
Q gi|254780261|r   82 EFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK  161 (221)
Q Consensus        82 Efrv~~~~~~~~vG~~i~~~~F~~Gq~VDV~g~SkGKGFqGviKR~gf~g~~~sHG~sk~hR~~GsiG~~~~PgRV~kGk  161 (221)
                                     -|++|+|++||+|||+|+||||||||+||||||+++|+|||+|++||+|||||++++|+|||||+
T Consensus        29 ---------------~l~v~~F~~Gq~VDV~g~SKGKGFqGviKRwgf~ggp~sHG~sk~hR~~GSiG~~~~P~RV~kGk   93 (150)
T 2zjr_B           29 ---------------GVNVDIFAEGEKIDATGTSKGKGTQGVMKRWNFAGGPASHGSKKWHRRPGSIGQRKTPGRVYKGK   93 (150)
T ss_dssp             ---------------CCSTTTSCTTCEEEEEEECCEEEEECHHHHHCCCCCCSSSSCSSCSCSCCCCCCSSTTCSCCTTC
T ss_pred             ---------------CCCCCCCCCCCEEEEEEEEECCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCC
T ss_conf             ---------------71333002898899999860446766235622155751136875323576544667576493478


Q ss_pred             CCCCCCCCEEEEECCCEEEEEECCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCC
Q ss_conf             66652377333651658999807689899971574588870999960314677853
Q gi|254780261|r  162 KMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK  217 (221)
Q Consensus       162 km~G~mG~~~~T~~nl~i~~id~e~n~i~vkGsVPG~~~~~~v~ir~a~k~~~~~k  217 (221)
                      |||||||++++|++||+|++||+|+|||||||||||| ++++|+|+||+++..+..
T Consensus        94 kMaG~mG~~~~Tv~Nl~VvrId~e~nlilVKGsVPG~-~~~~V~ir~s~k~~~~k~  148 (150)
T 2zjr_B           94 RMAGHMGMERVTVQNLEVVEIRAGENLILVKGAIPGA-NGGLVVLRSAAKASAAKG  148 (150)
T ss_dssp             CCCEEEECCEEEEEEEEEEEEETTTTEEEEESCCSSC-TTCEEEEEBCSSCC----
T ss_pred             CCCCCCCCEEEEECCCEEEEEECCCCEEEEECCCCCC-CCCEEEEEECCCCCCCCC
T ss_conf             6677315558986597899996889989995167689-998999984556676756