HHsearch alignment of GI: 254780261 and MMDB domain: 3i1n_D_31-101
>3i1n_D (D:31-101) 50S ribosomal protein L3; ribosome structure, protein-RNA complex, acetylation, ribonucleoprotein, ribosomal protein, RNA-binding, rRNA- binding, methylation; 3.19A {Escherichia coli k-12} PDB: 1p85_B 1p86_B 1vs8_D 2aw4_D 2awb_D 2gya_B 2gyc_B 1vs6_D 2i2v_D 2j28_D 2i2t_D* 2qao_D* 2qba_D* 2qbc_D* 2qbe_D 2qbg_D 2qbi_D* 2qbk_D* 2qov_D 2qox_D ...
Probab=99.87 E-value=1e-22 Score=153.30 Aligned_cols=71 Identities=32% Similarity=0.571 Sum_probs=68.2
Q ss_pred CCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEECCCCHHHHHCCCCEEEEEE
Q ss_conf 978999970677886125640555564315710112576403563410365320651121100341000123
Q gi|254780261|r 32 NCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103 (221)
Q Consensus 32 ~~~Vv~~kt~ekdGY~Avqvg~~~~k~k~~~Kp~~G~fkK~g~~pk~~l~Efrv~~~~~~~~vG~~i~~~~F 103 (221)
||+|+|+||.|+|||+|+|||+++++++++|||++|||+|++++|+++|+|||+++++ .+++|++|++++|
T Consensus 1 pc~V~q~Kt~e~dGY~AvqvG~g~~k~~~~~Kp~~Ghf~kagv~p~r~i~Efrv~~~~-~~~vG~~l~v~~F 71 (71)
T 3i1n_D 1 ANRVTQVKDLANDGYRAIQVTTGAKKANRVTKPEAGHFAKAGVEAGRGLWEFRLAEGE-EFTVGQSISVELF 71 (71)
T ss_dssp CBEEEEEECGGGSSCCEEEEECCCCCGGGSCHHHHHHHHSSCCCCCSCCEEEECSSCC-CCTTTCCBCGGGG
T ss_pred CCEEEEEEEECCCCCEEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCEEEEECCCCHH-HHCCCCCCCCCCE
T ss_conf 9899999832468953577422312332168647176210123332035320247566-6135651123413