HHsearch alignment of GI: 254780261 and MMDB domain: 3jyw_C_40-78_206-362

>3jyw_C (C:40-78,C:206-362) 60S ribosomal protein L3; eukaryotic ribosome, RACK1 protein, flexible fitting; 8.90A {Thermomyces lanuginosus} PDB: 1s1i_C
Probab=100.00  E-value=0  Score=320.31  Aligned_cols=111  Identities=25%  Similarity=0.409  Sum_probs=103.8

Q ss_pred             EEECCCCEEEEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEECCCEEE
Q ss_conf             12302532657898753433640575044212333577454346665555567522422676665237733365165899
Q gi|254780261|r  101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV  180 (221)
Q Consensus       101 ~~F~~Gq~VDV~g~SkGKGFqGviKR~gf~g~~~sHG~sk~hR~~GsiG~~~~PgRV~kGkkm~G~mG~~~~T~~nl~i~  180 (221)
                      |.=++||+|||+|+|||||||||||||||+++|++|  |++||++||||+ |+|+|||||++||||||++++|++||+|+
T Consensus        37 e~p~~G~~VDV~gvTKGkGfqGvvKRwgf~g~p~~h--sk~hR~~GsiG~-~~P~rV~~g~kmaGqmG~~~rT~~Nl~I~  113 (196)
T 3jyw_C           37 DTPEQNEMIDAIAVTKGHGFEGVTHRWGTKKLPRKT--HRGLRKVACIGA-WHPAHVMWSVARAGQRGYHSRTSINHKIY  113 (196)
T ss_dssp             ECCCTTSCEEEEEECCBCCSCCHHHHTCCCCCSSCC--SSCSSCCSCSSC-SSSSCCCTTCCCCCCCBCSEEEEEEECEE
T ss_pred             ECCCCCCEEEEEEEECCCCCCCEEEECCCCCCCCCC--CCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCEEEEEECEEEE
T ss_conf             847589779999876776655407734504788666--876887977789-99972678984477658846998530999


Q ss_pred             EEEC------------------------------CCCEEEEECCCCCCCCCEEEEEEECCCCCCC
Q ss_conf             9807------------------------------6898999715745888709999603146778
Q gi|254780261|r  181 SVDD------------------------------KRGLILVKGCVPGAKKNSWILVRDSFKSAVN  215 (221)
Q Consensus       181 ~id~------------------------------e~n~i~vkGsVPG~~~~~~v~ir~a~k~~~~  215 (221)
                      +||.                              |+|||+|||||||| ++++|+||+|+++..+
T Consensus       114 ~I~~~~~~~~~~t~~d~~~~~inp~gGF~~yG~v~~n~ilvKGsVPG~-~~~~v~ir~a~k~~~~  177 (196)
T 3jyw_C          114 RVGKGDDEANGATSFDRTKKTITPMGGFVHYGEIKNDFIMVKGCIPGN-RKRIVTLRKSLYTNTS  177 (196)
T ss_dssp             EEESSSCCCCCCSSCSSCSCBSSSSSCCSSSCCCCSCEEEESSCCSCC-SSCEECCEECSSCCSC
T ss_pred             EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCEEEEEECCCCC-CCCEEEECHHHCCCCC
T ss_conf             977855545543322333320134777553550427789997136578-8957998122056776