BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780261|ref|YP_003064674.1| 50S ribosomal protein L3
[Candidatus Liberibacter asiaticus str. psy62]
(221 letters)
Database: nr
13,984,884 sequences; 4,792,584,752 total letters
Searching..................................................done
>gi|119947126|ref|YP_944806.1| ribosomal protein L3 [Psychromonas ingrahamii 37]
gi|166233184|sp|A1T0E2|RL3_PSYIN RecName: Full=50S ribosomal protein L3
gi|119865730|gb|ABM05207.1| LSU ribosomal protein L3P [Psychromonas ingrahamii 37]
Length = 212
Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats.
Identities = 102/213 (47%), Positives = 132/213 (61%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ +G IPVTVL +V +TLD +GY A+QV AG K
Sbjct: 1 MTIGLIGRKVGMTRVFTEDGVSIPVTVLECSPNRVTQVKTLDTDGYQALQVTAGSKKASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP G F+ V + L+EF + + + VG+ S F VDVTG + GKG
Sbjct: 61 VNKPEAGHFAKAGVEAGRGLWEFTLADNEGADIKVGAELSVELFNEINKVDVTGQSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F GA+KR NF ATHG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLEV
Sbjct: 121 FQGAIKRWNFSMQDATHGNSVSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD +R L+LVKG V GA KN ++++ + K+
Sbjct: 181 VRVDIERNLLLVKGAVAGA-KNGDVIIKPAVKA 212
>gi|254516911|ref|ZP_05128969.1| ribosomal protein L3 [gamma proteobacterium NOR5-3]
gi|219674416|gb|EED30784.1| ribosomal protein L3 [gamma proteobacterium NOR5-3]
Length = 231
Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats.
Identities = 97/212 (45%), Positives = 128/212 (60%), Gaps = 1/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK GMT V+ +G IPVTV+ + +V + D +GY ++QV AG K
Sbjct: 21 MTIGLVGRKSGMTRVFTEDGASIPVTVVEVSPNRVTQIKENDSDGYRSIQVTAGSRKAAK 80
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VSK G F+ V + L+EFR+ +D+ VG+ + F GQ VDV G + GKGF
Sbjct: 81 VSKSEAGLFAKAGVEAGRGLWEFRLSAEDESFEVGAELTVERFEEGQKVDVAGKSKGKGF 140
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR NF ATHG S+SHR+ GS G Q PGRVFK KKM+G+MG VTV+ LE+V
Sbjct: 141 QGVIKRWNFSMQDATHGNSLSHRAPGSIGQCQTPGRVFKGKKMSGQMGNANVTVQGLEIV 200
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPGA + VR + K
Sbjct: 201 RVDAERNLLLIKGAVPGAP-GGDVFVRPAVKG 231
>gi|254418121|ref|ZP_05031845.1| ribosomal protein L3 [Brevundimonas sp. BAL3]
gi|196184298|gb|EDX79274.1| ribosomal protein L3 [Brevundimonas sp. BAL3]
Length = 249
Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats.
Identities = 126/219 (57%), Positives = 153/219 (69%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+GV+A+KLGMT V+ +G +PVTVL LD CQVV RT +++GY+A+Q+GAG K KN
Sbjct: 1 MRTGVIAKKLGMTRVFADDGAHVPVTVLQLDGCQVVGQRTQERDGYVALQLGAGTKKAKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+K R F+ V PK + EFRV + LL VG+ S +F VGQ VD+ G TIGKGF
Sbjct: 61 TNKAQRETFAKAEVEPKAYVTEFRVDA-EGLLDVGAELSAEHFVVGQKVDIQGETIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPGR F KKMAG G VT +NL VV
Sbjct: 120 AGAMKRWNFGGLRATHGVSLSHRSHGSTGNRQDPGRTFPGKKMAGHYGAETVTTQNLTVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
VD +RGLIL+KG VPG S++ VRD+ K A
Sbjct: 180 RVDAERGLILIKGAVPG-HDGSYVKVRDAIKKARPADAP 217
>gi|85374465|ref|YP_458527.1| 50S ribosomal protein L3 [Erythrobacter litoralis HTCC2594]
gi|123293706|sp|Q2N9B1|RL3_ERYLH RecName: Full=50S ribosomal protein L3
gi|84787548|gb|ABC63730.1| ribosomal protein L3 [Erythrobacter litoralis HTCC2594]
Length = 289
Score = 237 bits (605), Expect = 8e-61, Method: Composition-based stats.
Identities = 132/215 (61%), Positives = 163/215 (75%), Gaps = 1/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+GV+A+K+GMT ++ +GR +PVTVL L++CQVV RT +++GY A+QVG+G AK KN
Sbjct: 1 MRTGVIAKKVGMTRLFQEDGRHVPVTVLALEDCQVVSQRTQERDGYFALQVGSGVAKQKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP R F+ V K K+ EFRV+ +D LLPVG+ S +F GQ VD+TG T GKGF
Sbjct: 61 VAKPQREAFAKAEVGLKMKVAEFRVEGEDGLLPVGAAISAEHFIAGQKVDITGYTQGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKR FGGLRATHGVSISHRSHGSTG RQDPGRVFK KKMAG MG + T +NLEVV
Sbjct: 121 AGAMKRWGFGGLRATHGVSISHRSHGSTGNRQDPGRVFKGKKMAGHMGDRQRTQQNLEVV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D +RGLI VKG VPG KNSW+L+RD+ K +
Sbjct: 181 RTDPERGLIFVKGSVPG-TKNSWMLIRDAVKLPLP 214
>gi|149184311|ref|ZP_01862629.1| 50S ribosomal protein L3 [Erythrobacter sp. SD-21]
gi|148831631|gb|EDL50064.1| 50S ribosomal protein L3 [Erythrobacter sp. SD-21]
Length = 285
Score = 237 bits (605), Expect = 8e-61, Method: Composition-based stats.
Identities = 131/215 (60%), Positives = 162/215 (75%), Gaps = 1/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+GV+A+K+GMT ++ +GR +PVTVL L++CQV HRT D++GY VQVG+GEAK KN
Sbjct: 1 MRTGVIAKKVGMTRLFQEDGRHVPVTVLSLEDCQVTAHRTEDRDGYYGVQVGSGEAKQKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP R F+ V+ K K+ EFRV ++ LLPVG+ S +F GQ VD+TG T GKGF
Sbjct: 61 VNKPQREAFAKAEVALKMKVGEFRVDSEEALLPVGARISAEHFVAGQKVDITGHTQGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKR FGGLRATHGVSISHRSHGSTG RQDPGRVFK KKMAG MG + T +NLE+V
Sbjct: 121 AGAMKRWGFGGLRATHGVSISHRSHGSTGNRQDPGRVFKGKKMAGHMGDRQRTQQNLEIV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D RGL+ VKG VPGA KN W++VRD+ K +
Sbjct: 181 RTDADRGLLFVKGSVPGA-KNGWLMVRDAVKVRMP 214
>gi|85709057|ref|ZP_01040123.1| 50S ribosomal protein L3 [Erythrobacter sp. NAP1]
gi|85690591|gb|EAQ30594.1| 50S ribosomal protein L3 [Erythrobacter sp. NAP1]
Length = 273
Score = 237 bits (604), Expect = 9e-61, Method: Composition-based stats.
Identities = 132/211 (62%), Positives = 162/211 (76%), Gaps = 1/211 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+GV+A+K+GMT ++ +GR +PVTVL L++CQVV HRT D +GY AVQ+GAGEAK KN
Sbjct: 1 MRTGVIAKKVGMTRLFQEDGRHVPVTVLALEDCQVVSHRTADNDGYFAVQLGAGEAKQKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP R F V K+++ EFRV+ ++ L+PVGS+ S +F GQ VD+TG T GKGF
Sbjct: 61 VAKPQREHFGKAGVGLKQRVAEFRVENEEGLVPVGSLISADHFVAGQKVDITGHTQGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKR FGGLRATHGVSISHRSHGSTG RQDPGRVFK KKMAG MG + T NLEVV
Sbjct: 121 AGAMKRWGFGGLRATHGVSISHRSHGSTGNRQDPGRVFKGKKMAGHMGDRQRTQMNLEVV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
D RGL+ +KG VPG+ KN W+LVRD+ K
Sbjct: 181 RTDADRGLLFIKGSVPGS-KNGWLLVRDAIK 210
>gi|192360421|ref|YP_001981208.1| 50S ribosomal protein L3 [Cellvibrio japonicus Ueda107]
gi|226725144|sp|B3PK37|RL3_CELJU RecName: Full=50S ribosomal protein L3
gi|190686586|gb|ACE84264.1| ribosomal protein L3 [Cellvibrio japonicus Ueda107]
Length = 214
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 100/216 (46%), Positives = 134/216 (62%), Gaps = 2/216 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK GMT V+ +G IPVTV+ ++ +V +T D +GY AVQ+ GE +
Sbjct: 1 MTIGIVGRKTGMTRVFTDDGVSIPVTVIEVEPNRVTQVKTADTDGYSAVQITVGERRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+K G F+ NV + ++E R + VG+ + F+ GQ +DVTG + GKG+
Sbjct: 61 VTKSEAGHFAKANVEAGRSVWELRNNSQEA-FEVGASLTVEAFSAGQFIDVTGTSKGKGY 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR NFG ATHG S SHR GSTG Q PGRVFKNKKM G MG RVTV+NLE+V
Sbjct: 120 AGTVKRWNFGMQDATHGNSRSHRVPGSTGQCQSPGRVFKNKKMTGHMGAERVTVQNLEIV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
VD +R L+LVKG +PGA ++VR + K+ N
Sbjct: 180 RVDAERNLLLVKGAIPGAP-GGDVIVRPAVKARTNA 214
>gi|220935492|ref|YP_002514391.1| ribosomal protein L3 [Thioalkalivibrio sp. HL-EbGR7]
gi|254803700|sp|B8GV58|RL3_THISH RecName: Full=50S ribosomal protein L3
gi|219996802|gb|ACL73404.1| ribosomal protein L3 [Thioalkalivibrio sp. HL-EbGR7]
Length = 214
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 102/214 (47%), Positives = 135/214 (63%), Gaps = 2/214 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RKLGMT V+ +G +PVTV+ +D +V +T +++GY A+QV G K
Sbjct: 1 MAIGLVGRKLGMTRVFTEDGASLPVTVIEVDPNRVTQVKTEERDGYRALQVTTGARKASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP G F+ V + L+EFR+ D + G+ F GQ+VDVTG++ GKG
Sbjct: 61 VTKPRAGHFAKAGVEAGRGLWEFRLDGDQGAEIETGAELKVDIFEAGQIVDVTGISKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KRHNF ATHG S+SHR+ GS G Q PGRVFK KKMAG MG R TV+NLEV
Sbjct: 121 FQGVIKRHNFSMQDATHGNSLSHRAPGSIGQNQTPGRVFKGKKMAGHMGNERCTVQNLEV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
V VD +R L+L+KG VPG+ + +LVR K+
Sbjct: 181 VRVDVERNLLLIKGAVPGSTGGN-VLVRPGVKAK 213
>gi|148554274|ref|YP_001261856.1| 50S ribosomal protein L3 [Sphingomonas wittichii RW1]
gi|148499464|gb|ABQ67718.1| LSU ribosomal protein L3P [Sphingomonas wittichii RW1]
Length = 317
Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 125/219 (57%), Positives = 156/219 (71%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+GV+A+K+GMT ++ +GR +PVTVL L+N QVV R D++GY+AVQ+GAG AK KN
Sbjct: 67 MRTGVIAKKMGMTRLFQEDGRHVPVTVLALENVQVVARREQDRDGYVAVQLGAGSAKPKN 126
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP RG F V PK + EFRV + D LL VG+ S ++ GQ VD+ G T GKGF
Sbjct: 127 LTKPERGHFGKAEVEPKAFVAEFRVSE-DGLLDVGAEISADHYVAGQFVDIQGSTQGKGF 185
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR FGGLRATHGVS+SHRS GSTG RQDPG+VFKNKKMAG MG T +NLE+V
Sbjct: 186 AGGMKRWGFGGLRATHGVSVSHRSLGSTGQRQDPGKVFKNKKMAGHMGDKNRTQQNLEIV 245
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
D +RGL+ VKG VPG+ K W+LV+DS K A
Sbjct: 246 QTDAERGLLFVKGSVPGS-KGGWLLVKDSVKIAAPKDAP 283
>gi|89076770|ref|ZP_01163043.1| 50S ribosomal protein L3 [Photobacterium sp. SKA34]
gi|90581758|ref|ZP_01237542.1| 50S ribosomal protein L3 [Vibrio angustum S14]
gi|89047583|gb|EAR53197.1| 50S ribosomal protein L3 [Photobacterium sp. SKA34]
gi|90437056|gb|EAS62263.1| 50S ribosomal protein L3 [Vibrio angustum S14]
Length = 209
Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats.
Identities = 94/211 (44%), Positives = 136/211 (64%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT ++ +G IPVTV+ ++N +V ++++ +GY A+QV AG K V
Sbjct: 1 MIGLIGRKVGMTRIFTEDGISIPVTVVEVENNRVTQVKSVETDGYNAIQVTAGTKKASRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SKP G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF
Sbjct: 61 SKPEAGHFAKAGVEAGRGLWEFRLENSEE-FAVGAELNVELFNDIKKVDVTGTSKGKGFQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
GA+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V
Sbjct: 120 GAVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPG+ + ++V+ + K+
Sbjct: 180 VDAERNLLLIKGAVPGSTGGN-VIVKPAVKA 209
>gi|260770913|ref|ZP_05879842.1| LSU ribosomal protein L3p (L3e) [Vibrio furnissii CIP 102972]
gi|260614150|gb|EEX39340.1| LSU ribosomal protein L3p (L3e) [Vibrio furnissii CIP 102972]
gi|315178959|gb|ADT85873.1| 50S ribosomal protein L3 [Vibrio furnissii NCTC 11218]
Length = 209
Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats.
Identities = 96/211 (45%), Positives = 134/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT V+ +G IPVTV+ ++ +V +TL+ +GY A+QV AG K V
Sbjct: 1 MIGLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGSKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+K G F+ V + L+EFR++ ++ VGS + F + VDVTG + GKGF
Sbjct: 61 NKAEAGHFAKAGVEAGRGLWEFRLENGEE-FEVGSELTVELFNETKKVDVTGTSKGKGFQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
GA+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V
Sbjct: 120 GAVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPGA + ++V+ + K+
Sbjct: 180 VDAERNLLLIKGAVPGATGGN-VIVKPAVKA 209
>gi|258625740|ref|ZP_05720619.1| 50S ribosomal protein L3 [Vibrio mimicus VM603]
gi|258581978|gb|EEW06848.1| 50S ribosomal protein L3 [Vibrio mimicus VM603]
Length = 209
Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats.
Identities = 97/211 (45%), Positives = 136/211 (64%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT V+ +G IPVTV+ ++ +V +TL+ +GY A+QV AG K V
Sbjct: 1 MIGLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGSKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR++ ++ VGS + F+ + VDVTG + GKGF
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRLENGEE-FAVGSELTVELFSEVKKVDVTGTSKGKGFQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
GA+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V
Sbjct: 120 GAVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPGA + ++V+ + K+
Sbjct: 180 VDAERNLLLIKGAVPGATGGN-VIVKPAVKA 209
>gi|156973051|ref|YP_001443958.1| 50S ribosomal protein L3 [Vibrio harveyi ATCC BAA-1116]
gi|269959691|ref|ZP_06174071.1| 50S ribosomal protein L3 [Vibrio harveyi 1DA3]
gi|166234607|sp|A7MWI3|RL3_VIBHB RecName: Full=50S ribosomal protein L3
gi|156524645|gb|ABU69731.1| hypothetical protein VIBHAR_00730 [Vibrio harveyi ATCC BAA-1116]
gi|269835614|gb|EEZ89693.1| 50S ribosomal protein L3 [Vibrio harveyi 1DA3]
Length = 209
Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats.
Identities = 94/211 (44%), Positives = 134/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT V+ +G IPVTV+ ++ +V +TL+ +GY A+QV AG K V
Sbjct: 1 MIGLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGSKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+K G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF
Sbjct: 61 NKAEAGHFAKAGVEAGRGLWEFRLENGEE-FAVGAELTVELFNETKKVDVTGTSKGKGFQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
GA+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V
Sbjct: 120 GAVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPG+ + ++V+ + K+
Sbjct: 180 VDAERNLLLIKGAVPGSTGGN-VIVKPAVKA 209
>gi|88860959|ref|ZP_01135595.1| 50S ribosomal subunit protein L3 [Pseudoalteromonas tunicata D2]
gi|88817172|gb|EAR26991.1| 50S ribosomal subunit protein L3 [Pseudoalteromonas tunicata D2]
Length = 211
Score = 234 bits (598), Expect = 6e-60, Method: Composition-based stats.
Identities = 97/212 (45%), Positives = 129/212 (60%), Gaps = 1/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ +G IPVTV+ ++ +T +GY A+QV AG K
Sbjct: 1 MALGLVGRKVGMTRIFTEDGVSIPVTVIEATPNRIAQIKTDANDGYNALQVTAGTKKASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+K G F+ V + L+EFR+ D+ VGS + F VDVTG + GKGF
Sbjct: 61 VNKAQAGHFAKAGVEAGRGLWEFRLSGDEGSFEVGSEITVELFNDVTKVDVTGTSKGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR NF ATHG S+SHR+ GS G Q PG+VFK KKMAG MG RVT +NLEVV
Sbjct: 121 QGGVKRWNFRTQDATHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGHMGAERVTTQNLEVV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPG+ N ++V+ + K+
Sbjct: 181 RVDVERNLLLVKGAVPGSI-NGDVIVKPAVKA 211
>gi|261211151|ref|ZP_05925440.1| LSU ribosomal protein L3p (L3e) [Vibrio sp. RC341]
gi|262166617|ref|ZP_06034354.1| LSU ribosomal protein L3p (L3e) [Vibrio mimicus VM223]
gi|262170467|ref|ZP_06038145.1| LSU ribosomal protein L3p (L3e) [Vibrio mimicus MB-451]
gi|262401883|ref|ZP_06078448.1| LSU ribosomal protein L3p (L3e) [Vibrio sp. RC586]
gi|260839652|gb|EEX66263.1| LSU ribosomal protein L3p (L3e) [Vibrio sp. RC341]
gi|261891543|gb|EEY37529.1| LSU ribosomal protein L3p (L3e) [Vibrio mimicus MB-451]
gi|262026333|gb|EEY45001.1| LSU ribosomal protein L3p (L3e) [Vibrio mimicus VM223]
gi|262351855|gb|EEZ00986.1| LSU ribosomal protein L3p (L3e) [Vibrio sp. RC586]
Length = 209
Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats.
Identities = 97/211 (45%), Positives = 135/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT V+ +G IPVTV+ ++ +V +TL+ +GY A+QV AG K V
Sbjct: 1 MIGLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGSKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR++ ++ VGS + F + VDVTG + GKGF
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRLENGEE-FAVGSELTVELFNEVKKVDVTGTSKGKGFQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
GA+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V
Sbjct: 120 GAVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPGA + ++V+ + K+
Sbjct: 180 VDAERNLLLIKGAVPGATGGN-VIVKPAVKA 209
>gi|149192608|ref|ZP_01870762.1| 50S ribosomal protein L3 [Vibrio shilonii AK1]
gi|148833557|gb|EDL50640.1| 50S ribosomal protein L3 [Vibrio shilonii AK1]
Length = 209
Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats.
Identities = 101/211 (47%), Positives = 136/211 (64%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V RK+GMT ++ EG IPVTV+ ++ +V RTLD +GY A+QV AGE K V
Sbjct: 1 MIGLVGRKVGMTRIFTEEGVSIPVTVVEVEANRVTQVRTLDTDGYAAIQVTAGEKKASRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SKP G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF
Sbjct: 61 SKPEAGHFAKAGVEAGRGLWEFRLENGEE-FEVGAELNVELFNDVKKVDVTGTSKGKGFQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
GA+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V
Sbjct: 120 GAVKRWNFATQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPGA + ++V+ + K+
Sbjct: 180 VDAERNLLLIKGAVPGATGGN-VIVKPAIKA 209
>gi|296282582|ref|ZP_06860580.1| 50S ribosomal protein L3 [Citromicrobium bathyomarinum JL354]
Length = 278
Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats.
Identities = 131/219 (59%), Positives = 163/219 (74%), Gaps = 1/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+GV+A+K+GMT ++ +GR +PVTVL L+ CQV +RT D++GY +VQVG+GEAK KN
Sbjct: 1 MRTGVIAKKVGMTRLFQEDGRHVPVTVLALEGCQVTANRTADRDGYWSVQVGSGEAKQKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP R F+ V K K+ EFRV+ +D LLPVG+ + +F GQ VDV G T GKGF
Sbjct: 61 VNKPQREAFAKAEVGLKMKVAEFRVEGEDALLPVGATITADHFIAGQKVDVQGYTQGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKR FGGLRATHGVS+SHRSHGSTG RQDPGRVFKNKKMAG MG + T +NLE+V
Sbjct: 121 AGAMKRWGFGGLRATHGVSLSHRSHGSTGNRQDPGRVFKNKKMAGHMGDRQRTQQNLEIV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
D +RGL+ VKG VPGA KNSW+LV D+ K +
Sbjct: 181 RTDSERGLLFVKGSVPGA-KNSWMLVADAVKLPMPADAP 218
>gi|91229293|ref|ZP_01262910.1| 50S ribosomal protein L3 [Vibrio alginolyticus 12G01]
gi|262392516|ref|YP_003284370.1| 50S ribosomal protein L3p [Vibrio sp. Ex25]
gi|269964734|ref|ZP_06178972.1| 50S ribosomal protein L3 [Vibrio alginolyticus 40B]
gi|91187418|gb|EAS73766.1| 50S ribosomal protein L3 [Vibrio alginolyticus 12G01]
gi|262336110|gb|ACY49905.1| LSU ribosomal protein L3p (L3e) [Vibrio sp. Ex25]
gi|269830633|gb|EEZ84854.1| 50S ribosomal protein L3 [Vibrio alginolyticus 40B]
Length = 209
Score = 234 bits (596), Expect = 8e-60, Method: Composition-based stats.
Identities = 97/211 (45%), Positives = 134/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT V+ EG IPVTV+ ++ +V +TL+ +GY A+QV AG K V
Sbjct: 1 MIGLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGSKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+K G F+ V + L+EFR++ ++ VGS + F + VDVTG + GKGF
Sbjct: 61 NKAEAGHFAKAGVEAGRGLWEFRLENGEE-FEVGSELTVELFNETKKVDVTGTSKGKGFQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
GA+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V
Sbjct: 120 GAVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPGA + ++V+ + K+
Sbjct: 180 VDAERNLLLIKGAVPGATGGN-VIVKPAVKA 209
>gi|146278568|ref|YP_001168727.1| 50S ribosomal protein L3 [Rhodobacter sphaeroides ATCC 17025]
gi|145556809|gb|ABP71422.1| LSU ribosomal protein L3P [Rhodobacter sphaeroides ATCC 17025]
Length = 239
Score = 234 bits (596), Expect = 8e-60, Method: Composition-based stats.
Identities = 128/218 (58%), Positives = 162/218 (74%), Gaps = 2/218 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+KLGMT ++ +G+++PVTVL LD+ QVV RT +K+GY AVQ+GAG AK K
Sbjct: 1 MRSGVIAKKLGMTRLFLEDGKQVPVTVLQLDSLQVVAQRTAEKDGYTAVQLGAGAAKAKR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
S MRG F+ NV PK+K+ EFRV D L+ VG+ + ++ GQ VD+ G +IGKGF
Sbjct: 61 TSAGMRGHFAKANVEPKRKIAEFRVTP-DCLIDVGAEITADHYFAGQFVDIAGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRHNFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NL+VV
Sbjct: 120 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLQVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
D RGLI+VKG VPG+ K W+ ++D+ K V +
Sbjct: 180 RTDSDRGLIMVKGAVPGS-KGGWVTIKDAVKKPVPEQA 216
>gi|323495504|ref|ZP_08100578.1| 50S ribosomal protein L3 [Vibrio sinaloensis DSM 21326]
gi|323319385|gb|EGA72322.1| 50S ribosomal protein L3 [Vibrio sinaloensis DSM 21326]
Length = 209
Score = 234 bits (596), Expect = 8e-60, Method: Composition-based stats.
Identities = 97/211 (45%), Positives = 135/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT V+ EG IPVTV+ ++ +V +TL+ +GY A+QV G K V
Sbjct: 1 MIGLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SKP G F+ V + L+EFR++ D++ VG+ + F + VDVTG + GKGF
Sbjct: 61 SKPEAGHFAKAGVEAGRGLWEFRLENDEE-FAVGAELTVELFNDTKKVDVTGTSKGKGFQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
GA+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V
Sbjct: 120 GAVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPG+ + ++V+ + K+
Sbjct: 180 VDAERNLLLIKGAVPGSTGGN-VIVKPAVKA 209
>gi|28897031|ref|NP_796636.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus RIMD 2210633]
gi|153840341|ref|ZP_01993008.1| ribosomal protein L3 [Vibrio parahaemolyticus AQ3810]
gi|260877949|ref|ZP_05890304.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus AN-5034]
gi|260897591|ref|ZP_05906087.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus Peru-466]
gi|260899521|ref|ZP_05907916.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus AQ4037]
gi|42559620|sp|Q87T13|RL3_VIBPA RecName: Full=50S ribosomal protein L3
gi|28805239|dbj|BAC58520.1| ribosomal protein L3 [Vibrio parahaemolyticus RIMD 2210633]
gi|149745999|gb|EDM57129.1| ribosomal protein L3 [Vibrio parahaemolyticus AQ3810]
gi|308087536|gb|EFO37231.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus Peru-466]
gi|308089929|gb|EFO39624.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus AN-5034]
gi|308108784|gb|EFO46324.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus AQ4037]
gi|328471834|gb|EGF42711.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus 10329]
Length = 209
Score = 234 bits (596), Expect = 9e-60, Method: Composition-based stats.
Identities = 96/211 (45%), Positives = 134/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT V+ EG IPVTV+ ++ +V +TL+ +GY A+QV AG K V
Sbjct: 1 MIGLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGSKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+K G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF
Sbjct: 61 NKAEAGHFAKAGVEAGRGLWEFRLENGEE-FEVGAELTVELFNETKKVDVTGTSKGKGFQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
GA+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V
Sbjct: 120 GAVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPGA + ++V+ + K+
Sbjct: 180 VDAERNLLLIKGAVPGATGGN-VIVKPAVKA 209
>gi|330447037|ref|ZP_08310687.1| 50S ribosomal subunit protein L3 [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328491228|dbj|GAA05184.1| 50S ribosomal subunit protein L3 [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 209
Score = 234 bits (596), Expect = 9e-60, Method: Composition-based stats.
Identities = 93/211 (44%), Positives = 134/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT ++ +G IPVTV+ ++ +V ++++ +GY A+QV G K V
Sbjct: 1 MIGLIGRKVGMTRIFTEDGVSIPVTVVEVEANRVTQVKSVETDGYNAIQVTTGSKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SKP G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF
Sbjct: 61 SKPEAGHFAKAGVEAGRGLWEFRLENSEE-FAVGAELNVELFNDIKKVDVTGTSKGKGFQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
GA+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V
Sbjct: 120 GAVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPGA + ++V+ + K+
Sbjct: 180 VDAERNLLLIKGAVPGATGGN-VIVKPAVKA 209
>gi|254506374|ref|ZP_05118516.1| ribosomal protein L3 [Vibrio parahaemolyticus 16]
gi|219550548|gb|EED27531.1| ribosomal protein L3 [Vibrio parahaemolyticus 16]
Length = 209
Score = 234 bits (596), Expect = 9e-60, Method: Composition-based stats.
Identities = 98/211 (46%), Positives = 135/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT V+ EG IPVTV+ ++ +V +TL+ +GY A+QV G K V
Sbjct: 1 MIGLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SKP G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF
Sbjct: 61 SKPEAGHFAKAGVEAGRGLWEFRLENGEE-FAVGAELTVELFNETKKVDVTGTSKGKGFQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
GA+KR NF ATHG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V
Sbjct: 120 GAVKRWNFRTQDATHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPGA + ++V+ + K+
Sbjct: 180 VDAERNLLLIKGAVPGATGGN-VIVKPAVKA 209
>gi|15642591|ref|NP_232224.1| 50S ribosomal protein L3 [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|147673700|ref|YP_001218090.1| 50S ribosomal protein L3 [Vibrio cholerae O395]
gi|153827414|ref|ZP_01980081.1| ribosomal protein L3 [Vibrio cholerae MZO-2]
gi|153831409|ref|ZP_01984076.1| ribosomal protein L3 [Vibrio cholerae 623-39]
gi|227082713|ref|YP_002811264.1| ribosomal protein L3 [Vibrio cholerae M66-2]
gi|229507352|ref|ZP_04396857.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae BX 330286]
gi|229509725|ref|ZP_04399206.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae B33]
gi|229513519|ref|ZP_04402983.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae TMA 21]
gi|229516849|ref|ZP_04406295.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae RC9]
gi|229521662|ref|ZP_04411080.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae TM 11079-80]
gi|229524577|ref|ZP_04413982.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae bv. albensis
VL426]
gi|229527474|ref|ZP_04416866.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae 12129(1)]
gi|229606858|ref|YP_002877506.1| 50S ribosomal protein L3 [Vibrio cholerae MJ-1236]
gi|254292178|ref|ZP_04962948.1| ribosomal protein L3 [Vibrio cholerae AM-19226]
gi|254851136|ref|ZP_05240486.1| ribosomal protein L3 [Vibrio cholerae MO10]
gi|255744435|ref|ZP_05418387.1| LSU ribosomal protein L3p (L3e) [Vibrio cholera CIRS 101]
gi|262170153|ref|ZP_06037842.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae RC27]
gi|42559699|sp|Q9KNY4|RL3_VIBCH RecName: Full=50S ribosomal protein L3
gi|172047551|sp|A5F549|RL3_VIBC3 RecName: Full=50S ribosomal protein L3
gi|254803701|sp|C3LRQ8|RL3_VIBCM RecName: Full=50S ribosomal protein L3
gi|9657183|gb|AAF95737.1| ribosomal protein L3 [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|146315583|gb|ABQ20122.1| ribosomal protein L3 [Vibrio cholerae O395]
gi|148873110|gb|EDL71245.1| ribosomal protein L3 [Vibrio cholerae 623-39]
gi|149738687|gb|EDM53029.1| ribosomal protein L3 [Vibrio cholerae MZO-2]
gi|150421907|gb|EDN13884.1| ribosomal protein L3 [Vibrio cholerae AM-19226]
gi|227010601|gb|ACP06813.1| ribosomal protein L3 [Vibrio cholerae M66-2]
gi|227014485|gb|ACP10695.1| ribosomal protein L3 [Vibrio cholerae O395]
gi|229335106|gb|EEO00591.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae 12129(1)]
gi|229338158|gb|EEO03175.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae bv. albensis
VL426]
gi|229341256|gb|EEO06260.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae TM 11079-80]
gi|229345912|gb|EEO10884.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae RC9]
gi|229349396|gb|EEO14352.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae TMA 21]
gi|229353199|gb|EEO18138.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae B33]
gi|229354857|gb|EEO19778.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae BX 330286]
gi|229369513|gb|ACQ59936.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae MJ-1236]
gi|254846841|gb|EET25255.1| ribosomal protein L3 [Vibrio cholerae MO10]
gi|255737960|gb|EET93353.1| LSU ribosomal protein L3p (L3e) [Vibrio cholera CIRS 101]
gi|262021561|gb|EEY40273.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae RC27]
gi|327485078|gb|AEA79485.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae LMA3894-4]
Length = 209
Score = 234 bits (596), Expect = 1e-59, Method: Composition-based stats.
Identities = 96/211 (45%), Positives = 134/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT V+ +G IPVTV+ ++ +V +TL+ +GY A+QV G K V
Sbjct: 1 MIGLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGSKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR++ ++ VGS + F + VDVTG + GKGF
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRLENGEE-FAVGSELTVELFNEVKKVDVTGTSKGKGFQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
GA+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V
Sbjct: 120 GAVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPGA + ++V+ + K+
Sbjct: 180 VDAERNLLLIKGAVPGATGGN-VIVKPAVKA 209
>gi|260779503|ref|ZP_05888393.1| LSU ribosomal protein L3p (L3e) [Vibrio coralliilyticus ATCC
BAA-450]
gi|260604312|gb|EEX30616.1| LSU ribosomal protein L3p (L3e) [Vibrio coralliilyticus ATCC
BAA-450]
Length = 209
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 98/211 (46%), Positives = 134/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT V+ EG IPVTV+ ++ +V RTL+ +GY A+QV G K V
Sbjct: 1 MIGLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVRTLETDGYAAIQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SKP G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF
Sbjct: 61 SKPEAGHFAKAGVEAGRGLWEFRLENGEE-FEVGAELTVELFNETKKVDVTGTSKGKGFQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
GA+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V
Sbjct: 120 GAVKRWNFSTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPGA + ++V+ + K+
Sbjct: 180 VDAERNLLLIKGAVPGATGGN-VIVKPAVKA 209
>gi|90417569|ref|ZP_01225487.1| Ribosomal protein L3 [marine gamma proteobacterium HTCC2207]
gi|90330590|gb|EAS45886.1| Ribosomal protein L3 [marine gamma proteobacterium HTCC2207]
Length = 211
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 94/212 (44%), Positives = 128/212 (60%), Gaps = 1/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK GMT V+ +G IPVTV+ V ++++ +GY A+Q+ G K
Sbjct: 1 MSIGIVGRKCGMTRVFTEDGVSIPVTVVEATPNHVTQIKSVETDGYSAIQITTGSRKASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VSK G ++ V + +EFR + D VG + F GQ+VDVTG + GKGF
Sbjct: 61 VSKAQAGHYAKAGVEAGRGQWEFRTEGSSDDFAVGGSLTVERFEAGQMVDVTGTSKGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR NF ATHG S+SHR+ GS G Q PG+VFK KKMAG+MG +VT +NLE+V
Sbjct: 121 QGGVKRWNFAMQDATHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQMGNAQVTTQNLEIV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPGA + + VR + K+
Sbjct: 181 RVDAERNLLLIKGAVPGAPGGNVV-VRPAVKA 211
>gi|87199270|ref|YP_496527.1| 50S ribosomal protein L3 [Novosphingobium aromaticivorans DSM
12444]
gi|109893532|sp|Q2G8Y0|RL3_NOVAD RecName: Full=50S ribosomal protein L3
gi|87134951|gb|ABD25693.1| LSU ribosomal protein L3P [Novosphingobium aromaticivorans DSM
12444]
Length = 251
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 134/219 (61%), Positives = 168/219 (76%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+GV+A+K+GMT ++ +GR +PVTVL L+NCQVV RT +++GY+A+Q+GAGEAK KN
Sbjct: 1 MRTGVIAKKVGMTRLFQEDGRHVPVTVLSLENCQVVSVRTAERDGYVALQLGAGEAKQKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP R F+ V K ++ EFRV DD LL VGS + S+F GQ VD+TG T GKGF
Sbjct: 61 VAKPQREHFAKAEVPLKMEVAEFRV-ADDALLDVGSTIAASHFVPGQYVDITGQTQGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GAMKR FGG+RATHGVSISHR+HGSTG RQDPGRVFKNKKMAG MG + T +NLEVV
Sbjct: 120 QGAMKRWGFGGMRATHGVSISHRAHGSTGNRQDPGRVFKNKKMAGHMGDRQRTQQNLEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
DD+RGLI VKG VPG+ KN+W+LVRD+ K + + +
Sbjct: 180 RTDDERGLIFVKGSVPGS-KNAWLLVRDAVKVSRHAEAP 217
>gi|54307541|ref|YP_128561.1| 50S ribosomal protein L3 [Photobacterium profundum SS9]
gi|81828878|sp|Q6LVB6|RL3_PHOPR RecName: Full=50S ribosomal protein L3
gi|46911961|emb|CAG18759.1| putative ribosomal protein L3 [Photobacterium profundum SS9]
Length = 209
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 92/211 (43%), Positives = 133/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT ++ EG IPVTV+ ++ +V ++L+ +GY A+Q+ G K V
Sbjct: 1 MIGLIGRKVGMTRIFTEEGISIPVTVVEVEANRVTQVKSLETDGYNAIQITTGTKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SKP G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF
Sbjct: 61 SKPAAGHFAKAGVEAGRGLWEFRLENGEE-FAVGAELNVELFNEVKKVDVTGTSKGKGFQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V
Sbjct: 120 GVIKRWNFSTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPG+ + ++V+ + K+
Sbjct: 180 VDAERNLLLIKGAVPGSIGGN-VIVKPAVKA 209
>gi|77462259|ref|YP_351763.1| 50S ribosomal protein L3 [Rhodobacter sphaeroides 2.4.1]
gi|126461135|ref|YP_001042249.1| 50S ribosomal protein L3 [Rhodobacter sphaeroides ATCC 17029]
gi|221638113|ref|YP_002524375.1| 50S ribosomal protein L3 [Rhodobacter sphaeroides KD131]
gi|109893550|sp|Q3J5S2|RL3_RHOS4 RecName: Full=50S ribosomal protein L3
gi|77386677|gb|ABA77862.1| LSU ribosomal protein L3P [Rhodobacter sphaeroides 2.4.1]
gi|126102799|gb|ABN75477.1| LSU ribosomal protein L3P [Rhodobacter sphaeroides ATCC 17029]
gi|221158894|gb|ACL99873.1| 50S ribosomal protein L3 [Rhodobacter sphaeroides KD131]
Length = 240
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 127/217 (58%), Positives = 161/217 (74%), Gaps = 2/217 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+KLGMT ++ +G+++PVTVL LD+ QVV RT +K+GY AVQ+GAG AK K
Sbjct: 1 MRSGVIAKKLGMTRLFLEDGKQVPVTVLQLDSLQVVAQRTTEKDGYTAVQLGAGAAKAKR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VS RG F+ NV PK+K+ EFRV D L+ VG+ + ++ GQ VD+ G +IGKGF
Sbjct: 61 VSAAQRGHFAKANVEPKRKIAEFRVTP-DCLIDVGAEITADHYFAGQFVDIAGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRHNFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NL+VV
Sbjct: 120 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLQVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
D RGLI+VKG VPG+ K W+ ++D+ K +
Sbjct: 180 RTDSDRGLIMVKGAVPGS-KGGWVTIKDAVKKPAPEQ 215
>gi|94500993|ref|ZP_01307518.1| 50S ribosomal protein L3 [Oceanobacter sp. RED65]
gi|94426933|gb|EAT11916.1| 50S ribosomal protein L3 [Oceanobacter sp. RED65]
Length = 212
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 98/212 (46%), Positives = 129/212 (60%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V +K GMT V+ +G +PVTV+ + +V +T + +GY AVQV AG K
Sbjct: 1 MALGLVGKKAGMTRVFTEDGASVPVTVIEVTPNRVTQVKTTETDGYNAVQVTAGSRKASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VSK G F+ NV L EFR+++ D +G + F GQ+VDVTG + GKGF
Sbjct: 61 VSKAEAGHFAKANVEAGDSLLEFRIEEVAD-FNIGDELTVERFEAGQVVDVTGTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR NF ATHG S+SHR+ GS G Q PGRV+K KKMAG MG RVT +NLE+V
Sbjct: 120 QGGVKRWNFSTQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGHMGAARVTTQNLEIV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + LILVKG +PGA I ++ + K+
Sbjct: 180 RVDAESNLILVKGALPGATGGQLI-IKPAVKA 210
>gi|90409445|ref|ZP_01217509.1| ribosomal protein L3 [Psychromonas sp. CNPT3]
gi|90309447|gb|EAS37668.1| ribosomal protein L3 [Psychromonas sp. CNPT3]
Length = 212
Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 103/213 (48%), Positives = 135/213 (63%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ +G IPVTVL +V +TLD +GY A+QV G K
Sbjct: 1 MTIGLVGRKIGMTRIFTEDGVSIPVTVLECTPNRVTQVKTLDTDGYQAIQVTTGAKKASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDD-LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP G F+ V + L+EFR+++++ + VG+ S F VDVTG + GKG
Sbjct: 61 VTKPEAGHFAKAGVEAGRGLWEFRLEENEGTDIKVGAELSVELFNDITKVDVTGQSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KR NF ATHG S+SHRS+GS G Q PGRVFK KKM+G MG RVT +NLEV
Sbjct: 121 FQGGIKRWNFSMQDATHGNSLSHRSNGSIGMCQTPGRVFKGKKMSGHMGAERVTTQNLEV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD KR L+LVKG VPGA KN + ++ + K+
Sbjct: 181 VRVDVKRNLLLVKGAVPGA-KNGNVFIKPAVKA 212
>gi|90415162|ref|ZP_01223111.1| 50S ribosomal protein L3 [Photobacterium profundum 3TCK]
gi|90323709|gb|EAS40341.1| 50S ribosomal protein L3 [Photobacterium profundum 3TCK]
Length = 209
Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 93/211 (44%), Positives = 134/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT ++ EG IPVTV+ ++ +V ++L+ +GY A+Q+ G K V
Sbjct: 1 MIGLIGRKVGMTRIFTEEGISIPVTVVEVEANRVTQVKSLETDGYNAIQITTGTKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SKP G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF
Sbjct: 61 SKPAAGHFAKAGVEAGRGLWEFRLENGEE-FTVGAELNVELFNEVKKVDVTGTSKGKGFQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
GA+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V
Sbjct: 120 GAIKRWNFSTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPG+ + ++V+ + K+
Sbjct: 180 VDAERNLLLIKGAVPGSIGGN-VIVKPAVKA 209
>gi|148545739|ref|YP_001265841.1| 50S ribosomal protein L3 [Pseudomonas putida F1]
gi|161378147|ref|NP_742620.2| 50S ribosomal protein L3 [Pseudomonas putida KT2440]
gi|167031500|ref|YP_001666731.1| 50S ribosomal protein L3 [Pseudomonas putida GB-1]
gi|325272044|ref|ZP_08138485.1| 50S ribosomal protein L3 [Pseudomonas sp. TJI-51]
gi|42559622|sp|Q88QN5|RL3_PSEPK RecName: Full=50S ribosomal protein L3
gi|166233182|sp|A5VXP7|RL3_PSEP1 RecName: Full=50S ribosomal protein L3
gi|189042858|sp|B0KK67|RL3_PSEPG RecName: Full=50S ribosomal protein L3
gi|148509797|gb|ABQ76657.1| LSU ribosomal protein L3P [Pseudomonas putida F1]
gi|166857988|gb|ABY96395.1| ribosomal protein L3 [Pseudomonas putida GB-1]
gi|313496819|gb|ADR58185.1| RplC [Pseudomonas putida BIRD-1]
gi|324102821|gb|EGC00227.1| 50S ribosomal protein L3 [Pseudomonas sp. TJI-51]
Length = 211
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 100/212 (47%), Positives = 134/212 (63%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M GV+ RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE +
Sbjct: 1 MTIGVIGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+ G F+ NV+ + ++EFR+++ D G + FT GQLVDVTG + GKGF
Sbjct: 61 VTAAQAGHFAKANVAAGRGVWEFRLEEGD--FQAGDLIKAELFTAGQLVDVTGQSKGKGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV
Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPGA + VR + K+
Sbjct: 179 RVDAERNLLLIKGAVPGATGGDVV-VRPAVKA 209
>gi|24981833|gb|AAN66084.1|AE016238_2 ribosomal protein L3 [Pseudomonas putida KT2440]
Length = 222
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 100/212 (47%), Positives = 134/212 (63%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M GV+ RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE +
Sbjct: 12 MTIGVIGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 71
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+ G F+ NV+ + ++EFR+++ D G + FT GQLVDVTG + GKGF
Sbjct: 72 VTAAQAGHFAKANVAAGRGVWEFRLEEGD--FQAGDLIKAELFTAGQLVDVTGQSKGKGF 129
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV
Sbjct: 130 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 189
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPGA + VR + K+
Sbjct: 190 RVDAERNLLLIKGAVPGATGGDVV-VRPAVKA 220
>gi|260577181|ref|ZP_05845158.1| ribosomal protein L3 [Rhodobacter sp. SW2]
gi|259020655|gb|EEW23974.1| ribosomal protein L3 [Rhodobacter sp. SW2]
Length = 241
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 123/216 (56%), Positives = 161/216 (74%), Gaps = 2/216 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+KLGMT ++ +G+++PVTVL LD QVV RT +++GY AVQ+GAG AK K
Sbjct: 1 MRSGVIAKKLGMTRLFLEDGKQVPVTVLQLDALQVVAQRTAERDGYTAVQLGAGAAKAKR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+ MRG F++ NV+PK+K+ EFRV D+L+ VG+ + ++ GQ VD+ G +IGKGF
Sbjct: 61 TTAGMRGHFAAANVAPKRKIAEFRVSP-DNLIDVGAEITADHYLAGQFVDIAGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GAMKRHNFGGLRA+HGVS+SHRSHGSTG QDPG+VFK KKMAG MG R T +NL+VV
Sbjct: 120 QGAMKRHNFGGLRASHGVSVSHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRCTTQNLQVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
D RGLI++KG VPG+ K W+ ++D+ K A
Sbjct: 180 RTDADRGLIMIKGAVPGS-KGGWVTIKDAVKKAAPA 214
>gi|27364215|ref|NP_759743.1| 50S ribosomal protein L3 [Vibrio vulnificus CMCP6]
gi|320157601|ref|YP_004189980.1| 50S ribosomal protein L3p (L3e) [Vibrio vulnificus MO6-24/O]
gi|42559633|sp|Q8DE39|RL3_VIBVU RecName: Full=50S ribosomal protein L3
gi|27360333|gb|AAO09270.1| LSU ribosomal protein L3p (L3e) [Vibrio vulnificus CMCP6]
gi|319932913|gb|ADV87777.1| LSU ribosomal protein L3p (L3e) [Vibrio vulnificus MO6-24/O]
Length = 209
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 96/211 (45%), Positives = 133/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT V+ EG IPVTV+ ++ +V +TL+ +GY A+QV AG K V
Sbjct: 1 MIGLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVAQVKTLETDGYAAIQVTAGTKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+K G F+ V + L+EFR++ ++ VGS + F + VDVTG + GKGF
Sbjct: 61 NKAEAGHFAKAGVEAGRGLWEFRLENGEE-FAVGSELTVELFNEVKKVDVTGTSKGKGFQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V
Sbjct: 120 GTVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPGA + ++V+ + K+
Sbjct: 180 VDAERNLLLIKGAVPGATGGN-VIVKPAVKA 209
>gi|220930965|ref|YP_002507873.1| ribosomal protein L3 [Halothermothrix orenii H 168]
gi|254803676|sp|B8D0C4|RL3_HALOH RecName: Full=50S ribosomal protein L3
gi|219992275|gb|ACL68878.1| ribosomal protein L3 [Halothermothrix orenii H 168]
Length = 211
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 92/216 (42%), Positives = 133/216 (61%), Gaps = 5/216 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGMT +++ +G IPVTV+ C V+ + +++GY A+QVG +
Sbjct: 1 MAKGIIGKKLGMTQIFDDDGNVIPVTVVQAGPCVVIQKKVEERDGYNALQVGFEDVPEHR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP++G F V PKK + EF +D L G + F G+LVDVTG++ GKGF
Sbjct: 61 VNKPLKGHFERAGVKPKKHVKEFMDFPED--LNEGDEITVDIFEEGELVDVTGISKGKGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR NF +HG S HR+ GS G D RVFK +K+ GRMG +RVT++NLEVV
Sbjct: 119 AGTIKRWNFSRGPMSHG-SRFHRAPGSIGAV-DASRVFKGQKLPGRMGHDRVTIQNLEVV 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
VD ++ L+L+KG VPG K + +R++ K A N
Sbjct: 177 RVDSEKNLLLIKGSVPGPNKG-ILTIREAVKKASNA 211
>gi|312884703|ref|ZP_07744404.1| 50S ribosomal protein L3 [Vibrio caribbenthicus ATCC BAA-2122]
gi|309367616|gb|EFP95167.1| 50S ribosomal protein L3 [Vibrio caribbenthicus ATCC BAA-2122]
Length = 209
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 96/211 (45%), Positives = 134/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT V+ EG IPVTV+ ++ +V +TL+ +GY A+QV G K V
Sbjct: 1 MIGLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR++ ++ VGS + F + VDVTG + GKGF
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRLENGEE-FAVGSELTVELFNDTKKVDVTGTSKGKGFQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
GA+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V
Sbjct: 120 GAVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPG+ + ++V+ + K+
Sbjct: 180 VDAERNLLLIKGAVPGSTGGN-VIVKPAVKA 209
>gi|312793939|ref|YP_004026862.1| 50S ribosomal protein l3 [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312877365|ref|ZP_07737330.1| 50S ribosomal protein L3 [Caldicellulosiruptor lactoaceticus 6A]
gi|311795839|gb|EFR12203.1| 50S ribosomal protein L3 [Caldicellulosiruptor lactoaceticus 6A]
gi|312181079|gb|ADQ41249.1| 50S ribosomal protein L3 [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 210
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 102/212 (48%), Positives = 133/212 (62%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT V++ GR IPVTV+ C VV +T++K+GY A+QVG + K
Sbjct: 1 MTKGILGKKIGMTQVFDEAGRAIPVTVIEAGPCVVVQKKTVEKDGYSAIQVGFEDIKESK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP+RG F+ V PK+ L E R+ KD D VG F G+ VDVTG++ KGF
Sbjct: 61 LNKPLRGHFAKHGVKPKRFLRELRL-KDADKYEVGQEIRVDIFQPGERVDVTGISKAKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH +HG S+ HR GS G P R F KKM GRMGG RVTV NL+VV
Sbjct: 120 QGVIKRHGQQRGPMSHG-SMYHRRVGSMGSNTFPARTFPGKKMPGRMGGERVTVLNLQVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPG KNS +++RDS KS
Sbjct: 179 KVDPERNLLLVKGSVPG-NKNSLLIIRDSVKS 209
>gi|323492119|ref|ZP_08097281.1| 50S ribosomal protein L3 [Vibrio brasiliensis LMG 20546]
gi|323313680|gb|EGA66782.1| 50S ribosomal protein L3 [Vibrio brasiliensis LMG 20546]
Length = 209
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 96/211 (45%), Positives = 134/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT V+ EG IPVTV+ ++ +V +TL+ +GY A+QV G K V
Sbjct: 1 MIGLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SKP G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF
Sbjct: 61 SKPEAGHFAKAGVEAGRGLWEFRLENGEE-FAVGAELTVELFNDTKKVDVTGTSKGKGFQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
GA+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V
Sbjct: 120 GAVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPG+ + ++V+ + K+
Sbjct: 180 VDAERNLLLIKGAVPGSTGGN-VIVKPAVKA 209
>gi|88801219|ref|ZP_01116760.1| 50S ribosomal protein L3 [Reinekea sp. MED297]
gi|88776057|gb|EAR07291.1| 50S ribosomal protein L3 [Reinekea sp. MED297]
Length = 210
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 98/212 (46%), Positives = 128/212 (60%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK GMT V+ +G +PVTVL ++ +V +T+D +GY AVQ+ AG +
Sbjct: 1 MSIGLIGRKAGMTRVFTEDGVSVPVTVLEIEPNRVAQVKTVDTDGYAAVQLTAGNKRANK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+SK G F+ NV EF V D G + F GQ VDVTG + GKGF
Sbjct: 61 LSKSQAGHFAKANVEAGVLTREFPV-ADVSEYETGKELTVELFEAGQKVDVTGTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GA+KRHNF ATHG S+SHR+ GS G Q PGRV+K KKMAG MG R T ++LEVV
Sbjct: 120 AGAIKRHNFRTQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGHMGAERHTTQSLEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD R L+L+KG VPGA S ++V+ + K
Sbjct: 180 RVDTDRNLLLIKGAVPGA-TGSHVVVQSAVKG 210
>gi|163739437|ref|ZP_02146847.1| 50S ribosomal protein L3 [Phaeobacter gallaeciensis BS107]
gi|163740231|ref|ZP_02147625.1| 50S ribosomal protein L3 [Phaeobacter gallaeciensis 2.10]
gi|161386089|gb|EDQ10464.1| 50S ribosomal protein L3 [Phaeobacter gallaeciensis 2.10]
gi|161387190|gb|EDQ11549.1| 50S ribosomal protein L3 [Phaeobacter gallaeciensis BS107]
Length = 237
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 131/215 (60%), Positives = 161/215 (74%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSG++A+K+GMT ++ +G+++PVTVL LD QV RT +K+GY AVQ+GAG AKVK
Sbjct: 1 MRSGIIAKKVGMTRLFLEDGKQVPVTVLQLDGLQVTAQRTEEKDGYTAVQLGAGSAKVKR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VSK MRG F++ V PK+KL EFRV D L+ VG+ S +F GQ VDVTG +IGKGF
Sbjct: 61 VSKAMRGHFAAAKVEPKRKLVEFRV-PADALIEVGAEISAEHFLEGQKVDVTGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKR NFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV
Sbjct: 120 AGAMKRWNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D RGLI++KG VPG+ K W+ V+D+ K
Sbjct: 180 KTDADRGLIMIKGAVPGS-KGGWVTVKDAVKKKAP 213
>gi|85713373|ref|ZP_01044382.1| Ribosomal protein L3 [Idiomarina baltica OS145]
gi|85692801|gb|EAQ30790.1| Ribosomal protein L3 [Idiomarina baltica OS145]
Length = 212
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 95/213 (44%), Positives = 136/213 (63%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT V+ +G +PVTV+ + +V +T + +GY A+QV GE K
Sbjct: 1 MAIGLVGRKVGMTRVFQEDGASVPVTVIEVLANRVTQVKTEETDGYRALQVTTGEKKASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP G F+ + + L+EFR++ + D VGS + F+ + VDVTG + GKG
Sbjct: 61 VNKPSAGHFAKASSEAGRGLWEFRLEDGEGDDFAVGSEITVEVFSEIKKVDVTGTSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G +KR NF ATHG S+SHR+ GS G Q PG+VFK KKMAG+MG RVT ++LE+
Sbjct: 121 FAGTVKRWNFRTQDATHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQMGNERVTTQSLEL 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD +R L+L+KG VPGA ++V+ + K+
Sbjct: 181 VRVDAERNLLLIKGAVPGA-TGGDVIVKPAVKA 212
>gi|84685437|ref|ZP_01013335.1| 50S ribosomal protein L3 [Maritimibacter alkaliphilus HTCC2654]
gi|84666594|gb|EAQ13066.1| 50S ribosomal protein L3 [Rhodobacterales bacterium HTCC2654]
Length = 290
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 127/215 (59%), Positives = 164/215 (76%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT ++ +G+++PVTVL LD QVV RT +K+GY AVQ+GAG AK K
Sbjct: 2 MRSGVIAKKVGMTRLFLEDGKQVPVTVLQLDGLQVVAQRTTEKDGYTAVQLGAGSAKAKR 61
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SK MRG F++ NV+PK+K+ EFRV ++L+ VG + ++ GQ VDV+G +IGKGF
Sbjct: 62 TSKAMRGHFATANVAPKRKVAEFRVDA-ENLINVGEEITADHYFAGQFVDVSGTSIGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRHNFGGLRA+HGVSISHRSHGSTG QDPGRVFK KKMAG MG RVT +NL+VV
Sbjct: 121 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGRVFKGKKMAGHMGAARVTTQNLQVV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D +RGLI++KG VPG+ K W+ ++D+ K
Sbjct: 181 KTDSERGLIMIKGAVPGS-KGGWVTIKDAVKKPFP 214
>gi|77359116|ref|YP_338691.1| 50S ribosomal subunit protein L3 [Pseudoalteromonas haloplanktis
TAC125]
gi|109893540|sp|Q3IF25|RL3_PSEHT RecName: Full=50S ribosomal protein L3
gi|76874027|emb|CAI85248.1| 50S ribosomal subunit protein L3 [Pseudoalteromonas haloplanktis
TAC125]
Length = 211
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 93/212 (43%), Positives = 127/212 (59%), Gaps = 1/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ +G IPVTV+ ++ ++ +GY A+QV AG K
Sbjct: 1 MALGLVGRKVGMTRIFTEDGVSIPVTVIEATPNRIAQIKSEATDGYNALQVTAGTKKASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+K G F+ V + L+EFR+ + VG+ + F VDVTG + GKGF
Sbjct: 61 VNKASAGHFAKAGVEAGRGLWEFRLNGGEGDFEVGAELTVELFNEINKVDVTGTSKGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR NF ATHG S+SHR+ GS G Q PG+VFK KKMAG MG RVT +NLE+V
Sbjct: 121 QGGVKRWNFSMQDATHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGHMGAERVTTQNLELV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA ++V+ + K+
Sbjct: 181 RVDAERNLLLVKGAVPGAI-GGDVIVKPAVKA 211
>gi|254492312|ref|ZP_05105485.1| ribosomal protein L3 [Methylophaga thiooxidans DMS010]
gi|224462484|gb|EEF78760.1| ribosomal protein L3 [Methylophaga thiooxydans DMS010]
Length = 210
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 96/212 (45%), Positives = 137/212 (64%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK GMT V++ +G PVTV+ ++ +V +T+D +GY A+QV GE K
Sbjct: 1 MTIGLIGRKRGMTRVFSEDGVSTPVTVIEVEPNRVSQLKTVDTDGYNAIQVTVGERKASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP G F+ + +K+ EFRV ++ L VG+ F GQ +DV+G+T GKGF
Sbjct: 61 VTKPEAGHFAKAQAAAGRKVAEFRV-EEVSELEVGAELKVDLFENGQQIDVSGITKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR+ F G ATHG S+SHR+ GS G Q PGRVFK KKMAG MG + T++NL +V
Sbjct: 120 AGVVKRYGFRGGDATHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGDKKRTLQNLSIV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPGA S +++R + K+
Sbjct: 180 KVDAERNLLLIKGSVPGA-TGSDVIIRPAVKA 210
>gi|315497973|ref|YP_004086777.1| 50S ribosomal protein l3 [Asticcacaulis excentricus CB 48]
gi|315415985|gb|ADU12626.1| 50S ribosomal protein L3 [Asticcacaulis excentricus CB 48]
Length = 243
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 124/215 (57%), Positives = 157/215 (73%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+G++A+KLGMT ++ +G+ +PVTVL L+ CQVV RT DK+GY A+Q+GAG K KN
Sbjct: 1 MRTGLLAKKLGMTRYFDAQGQHVPVTVLSLEGCQVVAQRTKDKDGYTALQLGAGTRKAKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VSKP R F+ V PK L EFRV + D L+ VG+ FS +F GQ VD+ G TIGKGF
Sbjct: 61 VSKPERERFAKAQVEPKAILSEFRVSE-DALVEVGAEFSADHFVEGQRVDIQGTTIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKR NFGG+RATHGVS+SHR+HGSTG RQDPGR F KKMAG G VT NLEVV
Sbjct: 120 AGAMKRWNFGGMRATHGVSVSHRAHGSTGNRQDPGRTFPGKKMAGHYGVETVTTLNLEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
+D +RGLI ++G VPGA+ S++ +RD+ K +
Sbjct: 180 RIDAERGLIFIRGAVPGAE-GSFVKIRDAVKKSAP 213
>gi|269104012|ref|ZP_06156709.1| LSU ribosomal protein L3p (L3e) [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268163910|gb|EEZ42406.1| LSU ribosomal protein L3p (L3e) [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 209
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 92/211 (43%), Positives = 134/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT ++ G IPVTV+ ++ +V +T++ +GY A+Q+ G K V
Sbjct: 1 MIGLIGRKVGMTRIFTEAGVSIPVTVVEVEANRVSQVKTVETDGYNAIQITTGSKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR++ +++ VG+ + F + VDVTG + GKGF
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRLENNEE-FAVGAELTVELFNEVKKVDVTGTSKGKGFQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
GA+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V
Sbjct: 120 GAVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPGA + ++V+ + K+
Sbjct: 180 VDAERNLLLIKGAVPGATGGN-VIVKPAVKA 209
>gi|260432429|ref|ZP_05786400.1| 50S ribosomal protein L3 [Silicibacter lacuscaerulensis ITI-1157]
gi|260416257|gb|EEX09516.1| 50S ribosomal protein L3 [Silicibacter lacuscaerulensis ITI-1157]
Length = 242
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 134/215 (62%), Positives = 164/215 (76%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSG++A+K+GMT ++ +GR+IPVTVLHLDN QVV RT DK+GY AVQ+GAG AK K
Sbjct: 2 MRSGIIAKKVGMTRLFMEDGRQIPVTVLHLDNLQVVAQRTADKDGYTAVQLGAGAAKAKR 61
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SK MRG F++ V PK+KL EFRV + D L+ VG+ S +F GQ VDV+G +IGKGF
Sbjct: 62 TSKAMRGHFAAAKVEPKRKLAEFRVSE-DALIEVGAEISADHFVEGQKVDVSGTSIGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRHNFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV
Sbjct: 121 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D +RGL+ +KG VPG K+ W+ V+D+ K
Sbjct: 181 KTDAERGLVFIKGAVPGP-KSGWVTVKDAVKKKAP 214
>gi|254785079|ref|YP_003072507.1| 50S ribosomal protein L3 [Teredinibacter turnerae T7901]
gi|259709742|sp|C5BQ61|RL3_TERTT RecName: Full=50S ribosomal protein L3
gi|237683501|gb|ACR10765.1| ribosomal protein L3 [Teredinibacter turnerae T7901]
Length = 214
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 89/211 (42%), Positives = 125/211 (59%), Gaps = 2/211 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK GMT ++ +G +PVTV+ +D ++ ++++ +GY AVQV G +
Sbjct: 1 MTIGIVGRKSGMTRIFTDDGLSVPVTVIEVDPNRITQVKSVETDGYAAVQVTVGSRRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+K G F+ + ++E R + + G + F GQ VDVTG + GKGF
Sbjct: 61 VTKAEAGHFAKAQTEAGRGVWELRNEAGEAFEVGGQ-LTVEAFEAGQKVDVTGTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR NF ATHG S+SHR+ GS G Q PGRV K KKM+G MG RVT +NLEVV
Sbjct: 120 AGTVKRWNFRTQDATHGNSLSHRAPGSIGQCQTPGRVMKGKKMSGHMGAERVTTQNLEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
VD +R L+L+KG VPGA + +R + K
Sbjct: 180 RVDVERNLLLIKGAVPGAP-GGDVFIRPAVK 209
>gi|222529730|ref|YP_002573612.1| 50S ribosomal protein L3 [Caldicellulosiruptor bescii DSM 6725]
gi|254803649|sp|B9MKI1|RL3_ANATD RecName: Full=50S ribosomal protein L3
gi|222456577|gb|ACM60839.1| ribosomal protein L3 [Caldicellulosiruptor bescii DSM 6725]
Length = 210
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 101/213 (47%), Positives = 132/213 (61%), Gaps = 3/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT +++ GR IPVTV+ C VV +T++K+GY A+QVG + K
Sbjct: 1 MTKGILGKKIGMTQIFDEAGRAIPVTVIEAGPCVVVQKKTVEKDGYSAIQVGFEDIKESK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP+RG F+ V PK+ L E R+ KD D VG F G+ VDVTG++ KGF
Sbjct: 61 LNKPLRGHFAKHGVKPKRFLRELRL-KDADKYEVGQEIRVDIFQPGEKVDVTGISKAKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH +HG S+ HR GS G P R F KKM GRMGG RVTV NL+VV
Sbjct: 120 QGVIKRHGQQRGPMSHG-SMYHRRVGSMGSNTFPARTFPGKKMPGRMGGERVTVLNLQVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD R L+LVKG VPG KNS +++RDS KS
Sbjct: 179 KVDPDRNLLLVKGSVPG-NKNSLLIIRDSVKSK 210
>gi|312622045|ref|YP_004023658.1| 50S ribosomal protein l3 [Caldicellulosiruptor kronotskyensis 2002]
gi|312202512|gb|ADQ45839.1| 50S ribosomal protein L3 [Caldicellulosiruptor kronotskyensis 2002]
Length = 210
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 101/213 (47%), Positives = 132/213 (61%), Gaps = 3/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT +++ GR IPVTV+ C VV +T++K+GY A+QVG + K
Sbjct: 1 MTKGILGKKIGMTQIFDEAGRAIPVTVIEAGPCVVVQKKTVEKDGYSAIQVGFEDIKESK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP+RG F+ V PK+ L E R+ KD D VG F G+ VDVTG++ KGF
Sbjct: 61 LNKPLRGHFAKHGVKPKRFLRELRL-KDADKYEVGQEIRVDIFQPGERVDVTGISKAKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH +HG S+ HR GS G P R F KKM GRMGG RVTV NL+VV
Sbjct: 120 QGVIKRHGQQRGPMSHG-SMYHRRVGSMGSNTFPARTFPGKKMPGRMGGERVTVLNLQVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD R L+LVKG VPG KNS +++RDS KS
Sbjct: 179 KVDPDRNLLLVKGSVPG-NKNSLLIIRDSVKSK 210
>gi|312135496|ref|YP_004002834.1| 50S ribosomal protein l3 [Caldicellulosiruptor owensensis OL]
gi|311775547|gb|ADQ05034.1| 50S ribosomal protein L3 [Caldicellulosiruptor owensensis OL]
Length = 210
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 102/212 (48%), Positives = 134/212 (63%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT V++ EGR IPVTV+ C VV +T++K+GY A+QVG + K
Sbjct: 1 MTKGILGKKIGMTQVFDEEGRVIPVTVIEAGPCVVVQKKTVEKDGYSAIQVGFEDIKESK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP++G F+ V PK+ L E R+ KD D VG F G+ VDVTG++ KGF
Sbjct: 61 LNKPLKGHFAKHGVKPKRYLRELRL-KDADKYEVGQEIRVDIFQPGERVDVTGISKAKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH +HG S+ HR GS G P R F KKM GRMGG RVTV NL+VV
Sbjct: 120 QGVIKRHGQQRGPMSHG-SMYHRRVGSMGSNTFPARTFPGKKMPGRMGGERVTVLNLQVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPG KNS +++RDS KS
Sbjct: 179 KVDPERNLLLVKGSVPG-NKNSLLIIRDSVKS 209
>gi|261250417|ref|ZP_05942992.1| LSU ribosomal protein L3p (L3e) [Vibrio orientalis CIP 102891]
gi|260938986|gb|EEX94973.1| LSU ribosomal protein L3p (L3e) [Vibrio orientalis CIP 102891]
Length = 209
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 98/211 (46%), Positives = 134/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT V+ EG IPVTV+ ++ +V +TLD +GY A+QV G K V
Sbjct: 1 MIGLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLDTDGYAAIQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SKP G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF
Sbjct: 61 SKPEAGHFAKAGVEAGRGLWEFRLENGEE-FAVGAELTVELFNDTKKVDVTGTSKGKGFQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
GA+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V
Sbjct: 120 GAVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPGA + ++V+ + K+
Sbjct: 180 VDAERNLLLIKGAVPGATGGN-VIVKPAVKA 209
>gi|37678559|ref|NP_933168.1| 50S ribosomal protein L3 [Vibrio vulnificus YJ016]
gi|42559591|sp|Q7MPI8|RL3_VIBVY RecName: Full=50S ribosomal protein L3
gi|37197299|dbj|BAC93139.1| ribosomal protein L3 [Vibrio vulnificus YJ016]
Length = 209
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 95/211 (45%), Positives = 133/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT V+ EG IPVTV+ ++ ++ +TL+ +GY A+QV AG K V
Sbjct: 1 MIGLIGRKVGMTRVFTEEGVSIPVTVVEVEANRIAQVKTLETDGYAAIQVTAGTKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+K G F+ V + L+EFR++ ++ VGS + F + VDVTG + GKGF
Sbjct: 61 NKAEAGHFAKAGVEAGRGLWEFRLENGEE-FAVGSELTVELFNEVKKVDVTGTSKGKGFQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V
Sbjct: 120 GTVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPGA + ++V+ + K+
Sbjct: 180 VDAERNLLLIKGAVPGATGGN-VIVKPAVKA 209
>gi|254283460|ref|ZP_04958428.1| ribosomal protein L3 [gamma proteobacterium NOR51-B]
gi|219679663|gb|EED36012.1| ribosomal protein L3 [gamma proteobacterium NOR51-B]
Length = 211
Score = 232 bits (591), Expect = 4e-59, Method: Composition-based stats.
Identities = 99/212 (46%), Positives = 129/212 (60%), Gaps = 1/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M GVV RK GMT V+ EG +PVTV+ + +V + LD +GY A+QV AG+ K
Sbjct: 1 MTIGVVGRKSGMTRVFTDEGVSVPVTVVEIAPNRVTQLKDLDTDGYRAIQVTAGDRKASK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VS+ G F+ V+ L+EFR+ ++ +G+ + F GQ VDV G + GKGF
Sbjct: 61 VSRAEAGHFAKAGVAAGNGLWEFRLDGSEEQFEIGAELTVERFEQGQKVDVCGQSKGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KR NF ATHG S+SHR+ GS G Q PGRVFK KKMAG MG RVT + LEVV
Sbjct: 121 QGAVKRWNFRMQDATHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQGLEVV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPGA ++V + K
Sbjct: 181 RVDVERNLLLIKGAVPGAP-GGDVIVLPAVKG 211
>gi|302871498|ref|YP_003840134.1| 50S ribosomal protein L3 [Caldicellulosiruptor obsidiansis OB47]
gi|302574357|gb|ADL42148.1| 50S ribosomal protein L3 [Caldicellulosiruptor obsidiansis OB47]
Length = 210
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 103/213 (48%), Positives = 133/213 (62%), Gaps = 3/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT V++ EGR IPVTV+ C VV +T++K+GY A+QVG + K
Sbjct: 1 MTKGILGKKIGMTQVFDEEGRVIPVTVIEAGPCVVVQKKTVEKDGYSAIQVGFEDIKESK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP+RG F+ V PK+ L E R+ KD D VG F G+ VDVTG++ KGF
Sbjct: 61 LNKPLRGHFAKHGVKPKRYLRELRL-KDADKYEVGQEIRVDIFQPGERVDVTGISKAKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH +HG S+ HR GS G P R F KKM GRMGG RVTV NL+VV
Sbjct: 120 QGVIKRHGQQRGPMSHG-SMYHRRVGSMGSNTFPARTFPGKKMPGRMGGERVTVLNLQVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD R L+LVKG VPG KNS +++RDS KS
Sbjct: 179 KVDPDRNLLLVKGSVPG-NKNSLLIIRDSVKSK 210
>gi|260772096|ref|ZP_05881013.1| LSU ribosomal protein L3p (L3e) [Vibrio metschnikovii CIP 69.14]
gi|260612963|gb|EEX38165.1| LSU ribosomal protein L3p (L3e) [Vibrio metschnikovii CIP 69.14]
Length = 209
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 98/211 (46%), Positives = 135/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V RK+GMT V+ EG IPVTV+ ++ +V +TL+ +GY A+QV AG K V
Sbjct: 1 MIGLVGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGTKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRLENGEE-FEVGAELTVELFNEIKKVDVTGTSKGKGFQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
GA+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V
Sbjct: 120 GAVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPGA + ++V+ + K+
Sbjct: 180 VDAERNLLLIKGAVPGA-TGANVIVKPAIKA 209
>gi|315125262|ref|YP_004067265.1| 50S ribosomal subunit protein L3 [Pseudoalteromonas sp. SM9913]
gi|315013775|gb|ADT67113.1| 50S ribosomal subunit protein L3 [Pseudoalteromonas sp. SM9913]
Length = 211
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 92/212 (43%), Positives = 128/212 (60%), Gaps = 1/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ +G IPVTV+ ++ ++ +GY A+QV AG K
Sbjct: 1 MALGLVGRKVGMTRIFTEDGVSIPVTVIEATPNRIAQIKSDATDGYNALQVTAGTKKASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+K G F+ V + L+EFR+ + VG+ + F VDVTG + GKGF
Sbjct: 61 VNKATAGHFAKAGVEAGRGLWEFRLNGGEGDFEVGAELTVELFNEINKVDVTGTSKGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR NF ATHG S+SHR+ GS G Q PG+VFK KKMAG+MG +VT +NLE+V
Sbjct: 121 QGGVKRWNFSMQDATHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQMGNEQVTTQNLELV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA ++V+ + K+
Sbjct: 181 RVDAERNLLLVKGAVPGAI-GGDVIVKPAVKA 211
>gi|70732882|ref|YP_262650.1| 50S ribosomal protein L3 [Pseudomonas fluorescens Pf-5]
gi|109893539|sp|Q4K533|RL3_PSEF5 RecName: Full=50S ribosomal protein L3
gi|68347181|gb|AAY94787.1| ribosomal protein L3 [Pseudomonas fluorescens Pf-5]
Length = 211
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 100/212 (47%), Positives = 135/212 (63%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE +
Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+ G F+ NV+ + ++EFR+++ + G + + F GQLVDVTG + GKGF
Sbjct: 61 VTAAQAGHFAKANVAAGRGVWEFRLEEGE--YQAGDLINAEIFAAGQLVDVTGQSKGKGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV
Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA + + VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209
>gi|209693924|ref|YP_002261852.1| 50S ribosomal protein L3 [Aliivibrio salmonicida LFI1238]
gi|226725124|sp|B6EPS5|RL3_ALISL RecName: Full=50S ribosomal protein L3
gi|208007875|emb|CAQ78005.1| 50S ribosomal protein L3 [Aliivibrio salmonicida LFI1238]
Length = 209
Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats.
Identities = 95/211 (45%), Positives = 133/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V RK+GMT ++ EG IPVTV+ ++ +V +T++ +GY A+QV G K V
Sbjct: 1 MIGLVGRKVGMTRIFTEEGVSIPVTVVEVEVNRVSQVKTVETDGYNAIQVTCGSKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SKP G F+ V + L+EFR++ ++ VG+ S F + VDVTG + GKGF
Sbjct: 61 SKPEAGHFAKAGVEAGRGLWEFRLENGEE-FTVGAELSVEIFNEIKKVDVTGTSKGKGFQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
GA+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG R T +NLE+V
Sbjct: 120 GAIKRWNFATQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERCTTQNLEIVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPG+ + ++V+ + K+
Sbjct: 180 VDAERNLLLIKGAVPGSTGGN-VIVKPAVKA 209
>gi|56698636|ref|YP_169013.1| 50S ribosomal protein L3 [Ruegeria pomeroyi DSS-3]
gi|81819888|sp|Q5LLU6|RL3_SILPO RecName: Full=50S ribosomal protein L3
gi|56680373|gb|AAV97039.1| ribosomal protein L3 [Ruegeria pomeroyi DSS-3]
Length = 241
Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats.
Identities = 132/215 (61%), Positives = 164/215 (76%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSG++A+K+GMT ++ +G++IPVTVL LDN QVV RT +K+GY AVQ+GAG K+K
Sbjct: 1 MRSGIIAKKVGMTRLFMEDGKQIPVTVLQLDNLQVVAQRTTEKDGYTAVQLGAGTPKIKR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VSK MRG F++ V PK+KL EFRV + D L+ VG+ S +F GQ VDV+G +IGKGF
Sbjct: 61 VSKAMRGHFAAQKVEPKRKLAEFRVSE-DALIEVGAEISAEHFLTGQKVDVSGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRHNFGGLRA+HGVSISHRSHGSTG QDPGRVFK KKMAG MG RVT +NLEVV
Sbjct: 120 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGRVFKGKKMAGHMGAARVTTQNLEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D +RGL+ +KG VPG K+ W+ V+D+ K
Sbjct: 180 KTDAERGLVFIKGAVPGP-KSGWVTVKDAVKKKAP 213
>gi|254483423|ref|ZP_05096652.1| ribosomal protein L3 [marine gamma proteobacterium HTCC2148]
gi|214036297|gb|EEB76975.1| ribosomal protein L3 [marine gamma proteobacterium HTCC2148]
Length = 211
Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats.
Identities = 100/212 (47%), Positives = 130/212 (61%), Gaps = 1/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK GMT V+ +G IPVTV+ + +V + L+ +GY A+QV G K
Sbjct: 1 MAIGLVGRKSGMTRVFTEDGASIPVTVVEVSPNRVTQIKELETDGYRAIQVTTGNRKASK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VSK G F+ V KL EFR++ D+ VG + F VGQ+VDVTG + GKGF
Sbjct: 61 VSKSEAGHFAKAGVEAGTKLSEFRLEASDEAPEVGVELTVERFEVGQIVDVTGKSKGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR NF ATHG SISHR++GS G Q PGRVFK KKM+G MG +VT + LEV+
Sbjct: 121 QGGIKRWNFTMQDATHGNSISHRANGSIGQCQTPGRVFKGKKMSGHMGSEQVTTQGLEVI 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPGA + VR + K+
Sbjct: 181 RVDAERNLLLIKGAVPGAPGGDVV-VRPTVKA 211
>gi|172087649|ref|YP_203618.2| 50S ribosomal subunit protein L3 [Vibrio fischeri ES114]
gi|197333952|ref|YP_002154996.1| 50S ribosomal protein L3 [Vibrio fischeri MJ11]
gi|226730588|sp|B5FG09|RL3_VIBFM RecName: Full=50S ribosomal protein L3
gi|171902244|gb|AAW84730.2| 50S ribosomal subunit protein L3 [Vibrio fischeri ES114]
gi|197315442|gb|ACH64889.1| 50S ribosomal protein L3 [Vibrio fischeri MJ11]
Length = 209
Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats.
Identities = 95/211 (45%), Positives = 134/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V RK+GMT ++ EG IPVTV+ ++ +V +T++ +GY A+QV G K V
Sbjct: 1 MIGLVGRKVGMTRIFTEEGVSIPVTVVEVEANRVSQVKTVETDGYNAIQVTCGSKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SKP G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF
Sbjct: 61 SKPEAGHFAKAGVEAGRGLWEFRLENGEE-FAVGAELTVEVFNEIKKVDVTGTSKGKGFQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
GA+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V
Sbjct: 120 GAVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPG+ + ++V+ + K+
Sbjct: 180 VDAERNLLLIKGAVPGSTGGN-VIVKPAVKA 209
>gi|312127226|ref|YP_003992100.1| 50S ribosomal protein l3 [Caldicellulosiruptor hydrothermalis 108]
gi|311777245|gb|ADQ06731.1| 50S ribosomal protein L3 [Caldicellulosiruptor hydrothermalis 108]
Length = 210
Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats.
Identities = 102/212 (48%), Positives = 132/212 (62%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT V++ GR IPVTV+ C VV +T++K+GY A+QVG + K
Sbjct: 1 MTKGILGKKIGMTQVFDEAGRAIPVTVIEAGPCVVVQKKTVEKDGYSAIQVGFEDIKESK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP+RG F+ V PK+ L E R+ KD D VG F G+ VDVTG++ KGF
Sbjct: 61 LNKPLRGHFAKHGVKPKRFLRELRL-KDADKYEVGQEIRVDIFQPGERVDVTGISKAKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH +HG S+ HR GS G P R F KKM GRMGG RVTV NL+VV
Sbjct: 120 QGVIKRHGQQRGPMSHG-SMYHRRVGSMGSNTFPARTFPGKKMPGRMGGERVTVLNLQVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD R L+LVKG VPG KNS +++RDS KS
Sbjct: 179 KVDPDRNLLLVKGSVPG-NKNSLLIIRDSVKS 209
>gi|119468280|ref|ZP_01611406.1| 50S ribosomal subunit protein L3 [Alteromonadales bacterium TW-7]
gi|119448273|gb|EAW29537.1| 50S ribosomal subunit protein L3 [Alteromonadales bacterium TW-7]
Length = 211
Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats.
Identities = 92/212 (43%), Positives = 127/212 (59%), Gaps = 1/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ +G IPVTV+ ++ ++ +GY A+QV AG K
Sbjct: 1 MALGLVGRKVGMTRIFTEDGVSIPVTVIEATPNRIAQIKSDATDGYNALQVTAGTKKASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+K G F+ V + L+EFR+ + VG+ + F VDVTG + GKGF
Sbjct: 61 VNKASAGHFAKAGVEAGRGLWEFRLNGGEGDFEVGAELTVELFNEINKVDVTGTSKGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR NF ATHG S+SHR+ GS G Q PG+VFK KKMAG MG RVT +NLE+V
Sbjct: 121 QGGVKRWNFSMQDATHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGHMGAERVTTQNLELV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPG+ ++V+ + K+
Sbjct: 181 RVDAERNLLLVKGAVPGSI-GGDVIVKPAVKA 211
>gi|298500580|ref|ZP_07010384.1| LSU ribosomal protein L3 [Vibrio cholerae MAK 757]
gi|297540749|gb|EFH76806.1| LSU ribosomal protein L3 [Vibrio cholerae MAK 757]
Length = 209
Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats.
Identities = 95/208 (45%), Positives = 133/208 (63%), Gaps = 2/208 (0%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ RK+GMT V+ +G IPVTV+ ++ +V +TL+ +GY A+QV G K V+KP
Sbjct: 4 LIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGSKKANRVTKP 63
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
G F+ V + L+EFR++ ++ VGS + F + VDVTG + GKGF GA+
Sbjct: 64 EAGHFAKAGVEAGRGLWEFRLENGEE-FAVGSELTVELFNEVKKVDVTGTSKGKGFQGAV 122
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V VD
Sbjct: 123 KRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVDA 182
Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212
+R L+L+KG VPGA + ++V+ + K+
Sbjct: 183 ERNLLLIKGAVPGATGGN-VIVKPAVKA 209
>gi|89070557|ref|ZP_01157846.1| 50S ribosomal protein L3 [Oceanicola granulosus HTCC2516]
gi|89043864|gb|EAR50062.1| 50S ribosomal protein L3 [Oceanicola granulosus HTCC2516]
Length = 292
Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats.
Identities = 127/215 (59%), Positives = 161/215 (74%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
+RSG++A+K+GMT ++ +G++IPVTVL LD QVV RT++ +GY AVQ+GAG AK K
Sbjct: 2 LRSGIIAKKVGMTRIFQEDGKQIPVTVLQLDKLQVVAKRTVETDGYSAVQLGAGIAKAKR 61
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
S PMRG F+ NV PK+K+ EFRV ++L+ VG + ++ GQ VDV+G +IGKGF
Sbjct: 62 TSAPMRGHFAKANVEPKRKIAEFRV-AAENLIEVGEEITADHYFEGQYVDVSGTSIGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRHNFGGLRATHGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NL+VV
Sbjct: 121 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRVTTQNLQVV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D RGLI+VKG VPG+ K W+ V+D+ K
Sbjct: 181 RTDADRGLIMVKGAVPGS-KGGWVTVKDAVKKPTP 214
>gi|159042832|ref|YP_001531626.1| 50S ribosomal protein L3 [Dinoroseobacter shibae DFL 12]
gi|226725165|sp|A8LM48|RL3_DINSH RecName: Full=50S ribosomal protein L3
gi|157910592|gb|ABV92025.1| 50S ribosomal protein L3 [Dinoroseobacter shibae DFL 12]
Length = 279
Score = 231 bits (588), Expect = 6e-59, Method: Composition-based stats.
Identities = 125/215 (58%), Positives = 163/215 (75%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT ++ +G+++PVTVL LD QVV RT +K+GY AVQ+GAG AK K
Sbjct: 1 MRSGVIAKKVGMTRLFMEDGKQVPVTVLQLDKLQVVAQRTAEKDGYSAVQLGAGTAKAKR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+K MRG F++ +V PK+K+ EFRV ++L+ VG + ++ GQ VDV+G +IGKGF
Sbjct: 61 TTKAMRGHFAAASVEPKRKVAEFRVAP-ENLINVGEEITADHYFEGQYVDVSGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRHNFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NL+VV
Sbjct: 120 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLQVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D RGLI++KG VPG+ K W+ ++D+ K V
Sbjct: 180 RTDADRGLIMIKGAVPGS-KGGWVTIKDAVKKPVP 213
>gi|307543825|ref|YP_003896304.1| 50S ribosomal protein L3 [Halomonas elongata DSM 2581]
gi|307215849|emb|CBV41119.1| 50S ribosomal protein L3 [Halomonas elongata DSM 2581]
Length = 212
Score = 231 bits (588), Expect = 7e-59, Method: Composition-based stats.
Identities = 96/212 (45%), Positives = 134/212 (63%), Gaps = 1/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V +K GMT V+ +G +PVTV+ ++ +V ++++ +GY AVQV G K K+
Sbjct: 1 MTIGLVGKKAGMTRVFTEDGASVPVTVIEVEPNRVTRVKSVESDGYAAVQVTTGSRKAKH 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+SK G F+ V + L EFR+ + + VG + S F GQ VDVTG + GKG+
Sbjct: 61 LSKAQAGEFAKAGVEAGRSLMEFRLDEGAEAPEVGGELTVSLFEAGQRVDVTGTSKGKGY 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KR NF +HG S++HR+ GS G Q PGRVFK KKMAG+MG R TV+ LEVV
Sbjct: 121 QGAVKRWNFRTQDNSHGNSLAHRAPGSIGMCQTPGRVFKGKKMAGQMGNARCTVQTLEVV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPGA S ++VR + K+
Sbjct: 181 RVDAERNLLLIKGAVPGA-TGSDVIVRSAVKA 211
>gi|84394648|ref|ZP_00993340.1| 50S ribosomal protein L3 [Vibrio splendidus 12B01]
gi|86148881|ref|ZP_01067133.1| 50S ribosomal protein L3 [Vibrio sp. MED222]
gi|218710749|ref|YP_002418370.1| 50S ribosomal protein L3 [Vibrio splendidus LGP32]
gi|254803702|sp|B7VLF7|RL3_VIBSL RecName: Full=50S ribosomal protein L3
gi|84374730|gb|EAP91685.1| 50S ribosomal protein L3 [Vibrio splendidus 12B01]
gi|85833333|gb|EAQ51539.1| 50S ribosomal protein L3 [Vibrio sp. MED222]
gi|218323768|emb|CAV20125.1| 50S ribosomal protein L3 [Vibrio splendidus LGP32]
Length = 209
Score = 231 bits (588), Expect = 7e-59, Method: Composition-based stats.
Identities = 95/211 (45%), Positives = 134/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V RK+GMT V+ EG IPVTV+ ++ ++ +TL+ +GY A+QV G K V
Sbjct: 1 MIGLVGRKVGMTRVFTEEGVSIPVTVVEVEANRISQVKTLETDGYAAIQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRLENGEE-FEVGAELNVELFNEIKKVDVTGTSKGKGFQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
GA+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V
Sbjct: 120 GAIKRWNFSTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPG+ + ++V+ + K+
Sbjct: 180 VDAERNLLLIKGAVPGSTGGN-VIVKPAVKA 209
>gi|294675856|ref|YP_003576471.1| 50S ribosomal protein L3 [Rhodobacter capsulatus SB 1003]
gi|294474676|gb|ADE84064.1| 50S ribosomal protein L3 [Rhodobacter capsulatus SB 1003]
Length = 238
Score = 231 bits (588), Expect = 7e-59, Method: Composition-based stats.
Identities = 128/216 (59%), Positives = 164/216 (75%), Gaps = 2/216 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+KLGMT ++ +G+++PVTVL LDN QVV RT++ +GY AVQ+GAGEAK K
Sbjct: 1 MRSGVIAKKLGMTRLFLEDGKQVPVTVLLLDNLQVVAQRTVETDGYTAVQLGAGEAKAKR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+ MRG F+ NV+PK+KL EFRV ++L+ VG+ S ++ GQ VD+ G +IGKGF
Sbjct: 61 TTAAMRGHFAKANVAPKRKLCEFRVSP-ENLIDVGAEISAEHYLAGQHVDIAGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRHNFGGLRA+HGVS+SHRSHGSTG QDPG+VFK KKMAG +G RVT +NL+VV
Sbjct: 120 AGAMKRHNFGGLRASHGVSVSHRSHGSTGQCQDPGKVFKGKKMAGHLGAARVTTQNLQVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
D RGLI+VKG VPGA K W+ ++D+ K A
Sbjct: 180 RTDAARGLIMVKGSVPGA-KGGWVTIKDAVKKAAPA 214
>gi|167645578|ref|YP_001683241.1| 50S ribosomal protein L3 [Caulobacter sp. K31]
gi|189042835|sp|B0T2C2|RL3_CAUSK RecName: Full=50S ribosomal protein L3
gi|167348008|gb|ABZ70743.1| ribosomal protein L3 [Caulobacter sp. K31]
Length = 256
Score = 231 bits (588), Expect = 7e-59, Method: Composition-based stats.
Identities = 120/215 (55%), Positives = 155/215 (72%), Gaps = 2/215 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+GV+A+KLGMT ++ G+ +PVTVL LD CQV RT++K+GY A+Q+GAG K KN
Sbjct: 7 RTGVIAKKLGMTRFFDETGQHVPVTVLSLDGCQVTAQRTVEKDGYTALQLGAGAKKPKNT 66
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
MRG F+ +V PK+ + EFRV + L+ VG+ F+ ++ GQ VD+ G+T+GKGF+
Sbjct: 67 PNAMRGHFAKNSVEPKRIVAEFRVDE-AALIEVGAEFTADHYVAGQKVDIQGITVGKGFA 125
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
GAMKR NF GLRATHGVS+SHRSHGSTG RQDPGR FK KKMAG +G VT N+ V
Sbjct: 126 GAMKRWNFSGLRATHGVSVSHRSHGSTGQRQDPGRTFKGKKMAGHLGQETVTTLNVTVWK 185
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
VD +RGLILVKG VPG++ S++ VRD+ K A
Sbjct: 186 VDVERGLILVKGAVPGSE-GSYVKVRDAIKKAAPA 219
>gi|254474359|ref|ZP_05087745.1| ribosomal protein L3 [Ruegeria sp. R11]
gi|214028602|gb|EEB69437.1| ribosomal protein L3 [Ruegeria sp. R11]
Length = 239
Score = 231 bits (588), Expect = 7e-59, Method: Composition-based stats.
Identities = 131/215 (60%), Positives = 161/215 (74%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSG++A+K+GMT ++ +G+++PVTVL LD QV RT +K+GY AVQ+GAG AKVK
Sbjct: 3 MRSGIIAKKVGMTRLFLEDGKQVPVTVLQLDGLQVTAQRTEEKDGYTAVQLGAGSAKVKR 62
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VSK MRG F++ V PK+KL EFRV D L+ VG+ S +F GQ VDVTG +IGKGF
Sbjct: 63 VSKAMRGHFAAAKVEPKRKLVEFRV-PADGLIEVGAEISAEHFLEGQKVDVTGTSIGKGF 121
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKR NFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV
Sbjct: 122 AGAMKRWNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 181
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D RGLI++KG VPG+ K W+ V+D+ K
Sbjct: 182 KTDADRGLIMIKGAVPGS-KGGWVTVKDAVKKKAP 215
>gi|104779755|ref|YP_606253.1| 50S ribosomal protein L3 [Pseudomonas entomophila L48]
gi|123079277|sp|Q1IFW6|RL3_PSEE4 RecName: Full=50S ribosomal protein L3
gi|95108742|emb|CAK13436.1| 50S ribosomal subunit protein L3 [Pseudomonas entomophila L48]
Length = 211
Score = 231 bits (588), Expect = 8e-59, Method: Composition-based stats.
Identities = 101/212 (47%), Positives = 134/212 (63%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE +
Sbjct: 1 MTIGVVGRKAGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+ G F+ NV+ + ++EFR+++ D G + FT GQLVDVTG + GKGF
Sbjct: 61 VTAAQAGHFAKANVAAGRGVWEFRLEEGD--FQAGDLIKAELFTAGQLVDVTGQSKGKGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV
Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPGA + VR + K+
Sbjct: 179 RVDAERNLLLIKGAVPGATGGDVV-VRPAVKA 209
>gi|330962525|gb|EGH62785.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 211
Score = 230 bits (587), Expect = 8e-59, Method: Composition-based stats.
Identities = 101/212 (47%), Positives = 133/212 (62%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE +
Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+ G F+ NV+ + + EFR+++ D G + + F GQLVDVTG + GKGF
Sbjct: 61 VTAAQAGHFAKANVAAGRTVMEFRLEEGD--YQAGDLINAEIFAAGQLVDVTGQSKGKGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV
Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA + + VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209
>gi|170723906|ref|YP_001751594.1| 50S ribosomal protein L3 [Pseudomonas putida W619]
gi|226730552|sp|B1JDW4|RL3_PSEPW RecName: Full=50S ribosomal protein L3
gi|169761909|gb|ACA75225.1| ribosomal protein L3 [Pseudomonas putida W619]
Length = 211
Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats.
Identities = 101/212 (47%), Positives = 133/212 (62%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE +
Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+ G F+ NV+ + ++EFR+++ + G FT GQLVDVTG + GKGF
Sbjct: 61 VTAAQAGHFAKANVAAGRGVWEFRLEEGE--FQAGDSIKAELFTAGQLVDVTGQSKGKGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV
Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA + VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGDVV-VRPAVKA 209
>gi|148982483|ref|ZP_01816779.1| 50S ribosomal protein L3 [Vibrionales bacterium SWAT-3]
gi|145960448|gb|EDK25827.1| 50S ribosomal protein L3 [Vibrionales bacterium SWAT-3]
Length = 209
Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats.
Identities = 95/211 (45%), Positives = 134/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V RK+GMT V+ EG IPVTV+ ++ ++ +TL+ +GY A+QV G K V
Sbjct: 1 MIGLVGRKVGMTRVFTEEGVSIPVTVVEVEANRISQVKTLENDGYAAIQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRLENGEE-FEVGAELNVELFNEIKKVDVTGTSKGKGFQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
GA+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V
Sbjct: 120 GAVKRWNFSTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPG+ + ++V+ + K+
Sbjct: 180 VDAERNLLLIKGAVPGSTGGN-VIVKPAVKA 209
>gi|66047775|ref|YP_237616.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. syringae B728a]
gi|257483185|ref|ZP_05637226.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|289648942|ref|ZP_06480285.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. aesculi str.
2250]
gi|289675488|ref|ZP_06496378.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. syringae FF5]
gi|298489097|ref|ZP_07007119.1| LSU ribosomal protein L3p (L3e) [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|81307859|sp|Q4ZMP4|RL3_PSEU2 RecName: Full=50S ribosomal protein L3
gi|63258482|gb|AAY39578.1| Ribosomal protein L3 [Pseudomonas syringae pv. syringae B728a]
gi|298156409|gb|EFH97507.1| LSU ribosomal protein L3p (L3e) [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|330891931|gb|EGH24592.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. mori str.
301020]
gi|330953197|gb|EGH53457.1| 50S ribosomal protein L3 [Pseudomonas syringae Cit 7]
gi|330969821|gb|EGH69887.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. aceris str.
M302273PT]
gi|330976640|gb|EGH76684.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. aptata str. DSM
50252]
gi|331012413|gb|EGH92469.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. tabaci ATCC
11528]
Length = 211
Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats.
Identities = 101/212 (47%), Positives = 132/212 (62%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE +
Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+ G F+ NV+ + + EFR+++ D G + F GQLVDVTG + GKGF
Sbjct: 61 VTAAQAGHFAKANVAAGRTVMEFRLEEGD--YQAGDQINAEIFAAGQLVDVTGQSKGKGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV
Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA + + VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209
>gi|332038837|gb|EGI75279.1| 50S ribosomal protein L3 [Pseudoalteromonas haloplanktis ANT/505]
Length = 211
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 93/212 (43%), Positives = 127/212 (59%), Gaps = 1/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ +G IPVTV+ ++ ++ +GY A+QV AG K
Sbjct: 1 MALGLVGRKVGMTRIFTEDGVSIPVTVIEATPNRIAQIKSDATDGYNALQVTAGTKKASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+K G F+ V + L+EFR+ + VG+ + F VDVTG + GKGF
Sbjct: 61 VNKAKAGHFAKAGVEAGRGLWEFRLNGGEGDFEVGAELTVELFNEINKVDVTGTSKGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR NF ATHG S+SHR+ GS G Q PG+VFK KKMAG MG RVT +NLE+V
Sbjct: 121 QGGVKRWNFSMQDATHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGHMGAERVTTQNLELV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA ++V+ + K+
Sbjct: 181 RVDAERNLLLVKGAVPGAI-GGDVIVKPAVKA 211
>gi|237797432|ref|ZP_04585893.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. oryzae str. 1_6]
gi|302189277|ref|ZP_07265950.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. syringae 642]
gi|331020282|gb|EGI00339.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 211
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 101/212 (47%), Positives = 132/212 (62%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE +
Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+ G F+ NV+ + + EFR+++ D G + F GQLVDVTG + GKGF
Sbjct: 61 VTAAQAGHFAKANVAAGRTVMEFRLEEGD--YQTGDQINAEIFAAGQLVDVTGQSKGKGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV
Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA + + VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209
>gi|331018160|gb|EGH98216.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 211
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 99/212 (46%), Positives = 131/212 (61%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE +
Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+ G F+ NV+ + + EFR+++ + G + F GQLVDV G + GKGF
Sbjct: 61 VTAAQAGHFAKANVAAGRTVMEFRLEEGE--YQAGDQINAEIFAAGQLVDVAGQSKGKGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV
Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA + + VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209
>gi|15599459|ref|NP_252953.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa PAO1]
gi|116052298|ref|YP_788856.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa UCBPP-PA14]
gi|152989623|ref|YP_001346223.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa PA7]
gi|218889409|ref|YP_002438273.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa LESB58]
gi|296387180|ref|ZP_06876679.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa PAb1]
gi|42559696|sp|Q9HWD5|RL3_PSEAE RecName: Full=50S ribosomal protein L3
gi|122261447|sp|Q02T80|RL3_PSEAB RecName: Full=50S ribosomal protein L3
gi|166233180|sp|A6UZI8|RL3_PSEA7 RecName: Full=50S ribosomal protein L3
gi|226730551|sp|B7V644|RL3_PSEA8 RecName: Full=50S ribosomal protein L3
gi|9950480|gb|AAG07651.1|AE004841_29 50S ribosomal protein L3 [Pseudomonas aeruginosa PAO1]
gi|115587519|gb|ABJ13534.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa UCBPP-PA14]
gi|150964781|gb|ABR86806.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa PA7]
gi|218769632|emb|CAW25392.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa LESB58]
Length = 211
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 99/212 (46%), Positives = 135/212 (63%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV AGE +
Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEVEPNRVTQFKTEETDGYRAVQVTAGERRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+K G F+ NV+ + ++EFR+ ++ G + F GQ+VDVTG + GKGF
Sbjct: 61 VTKAQAGHFAKANVAAGRGVWEFRL--GEEQYAAGDQITVDLFQAGQMVDVTGESKGKGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G +G RVTV++LE+V
Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHLGAERVTVQSLEIV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA ++VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGA-TGGDVIVRPAAKA 209
>gi|117619475|ref|YP_854839.1| ribosomal protein L3 [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
gi|166233112|sp|A0KF21|RL3_AERHH RecName: Full=50S ribosomal protein L3
gi|117560882|gb|ABK37830.1| ribosomal protein L3 [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
Length = 210
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 94/212 (44%), Positives = 131/212 (61%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ +G IPVTV+ ++ +V ++++ +GY A+QV G K
Sbjct: 1 MTIGLVGRKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKSVETDGYNAIQVTTGAKKASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP G F+ V + L+EFR+ + VGS +LVDVTG + GKGF
Sbjct: 61 VTKPEAGHFAKAGVEAGRGLWEFRLNNGE-TFTVGSELKVDLLADVKLVDVTGTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR NF THG S+SHR GS G Q PGRVFK KKMAG MG RVT +NLE+V
Sbjct: 120 AGTVKRWNFRTQDMTHGNSLSHRVPGSIGQNQTPGRVFKGKKMAGHMGAERVTTQNLELV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPGA + ++V+ + K+
Sbjct: 180 RVDAERNLLLIKGAVPGATNGN-VIVKPAVKA 210
>gi|330812075|ref|YP_004356537.1| 50S ribosomal protein L3 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327380183|gb|AEA71533.1| 50S ribosomal protein L3 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 211
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 100/212 (47%), Positives = 133/212 (62%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE +
Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+ G F+ NV+ + + EFR+++ + G + + F GQLVDVTG + GKGF
Sbjct: 61 VTAAQAGHFAKANVAAGRTVMEFRLEEGE--YQAGDLINAEIFAAGQLVDVTGQSKGKGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV
Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA + + VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209
>gi|83858566|ref|ZP_00952088.1| 50S ribosomal protein L3 [Oceanicaulis alexandrii HTCC2633]
gi|83853389|gb|EAP91241.1| 50S ribosomal protein L3 [Oceanicaulis alexandrii HTCC2633]
Length = 246
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 129/212 (60%), Positives = 163/212 (76%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+G++A+KLGMT V+ +G +PVTVLHLD QVV RT + +GY AVQ+GAG+AK K
Sbjct: 1 MRTGLLAKKLGMTRVFTEDGDHVPVTVLHLDGLQVVAQRTSENDGYTAVQLGAGKAKAKR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SK MRG F+ +V PK+KL EFRV +D L+ G+ S +F VGQ VDV+G +IGKGF
Sbjct: 61 TSKAMRGHFAKASVEPKRKLVEFRV-PEDALIEAGAELSAEHFVVGQKVDVSGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR NFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG +G RVT+++LE+V
Sbjct: 120 AGGMKRWNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHLGSERVTIQSLEIV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +RGL+LVKG VPG+ K SW+ +RD+ K
Sbjct: 180 RVDAERGLVLVKGAVPGS-KESWVEIRDAVKG 210
>gi|197104696|ref|YP_002130073.1| 50S ribosomal protein L3 [Phenylobacterium zucineum HLK1]
gi|226730544|sp|B4R8L7|RL3_PHEZH RecName: Full=50S ribosomal protein L3
gi|196478116|gb|ACG77644.1| 50S ribosomal protein L3 [Phenylobacterium zucineum HLK1]
Length = 261
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 125/219 (57%), Positives = 158/219 (72%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+GV+A+KLGM ++ G +PVTVL L+ CQVV HRT DK+GY+A+Q+GAG K KN
Sbjct: 1 MRTGVIAKKLGMARFFDEAGVHVPVTVLSLEGCQVVAHRTKDKDGYVALQLGAGSKKPKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SK +RG F+ V PK KL EF+V + D+L+ VG+ + +F GQ VD+TG T+GKGF
Sbjct: 61 TSKGLRGHFAKGQVEPKAKLVEFKVSE-DNLIDVGAELTADHFVPGQKVDITGTTVGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPGR F KKMAG G VT NL V
Sbjct: 120 AGAMKRWNFGGLRATHGVSVSHRSHGSTGQRQDPGRTFPGKKMAGHYGQETVTTLNLTVW 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
VD +RGLILVKG VPG + +++ +RD+ K+A+
Sbjct: 180 RVDAERGLILVKGAVPGTE-GTFVKIRDAVKAALPADAP 217
>gi|28867854|ref|NP_790473.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. tomato str.
DC3000]
gi|213969214|ref|ZP_03397352.1| ribosomal protein L3 [Pseudomonas syringae pv. tomato T1]
gi|301381721|ref|ZP_07230139.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. tomato Max13]
gi|302061079|ref|ZP_07252620.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. tomato K40]
gi|302130780|ref|ZP_07256770.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|42559621|sp|Q889X1|RL3_PSESM RecName: Full=50S ribosomal protein L3
gi|28851090|gb|AAO54168.1| ribosomal protein L3 [Pseudomonas syringae pv. tomato str. DC3000]
gi|213925892|gb|EEB59449.1| ribosomal protein L3 [Pseudomonas syringae pv. tomato T1]
gi|330879442|gb|EGH13591.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. morsprunorum
str. M302280PT]
gi|330966911|gb|EGH67171.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 211
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 100/212 (47%), Positives = 132/212 (62%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE +
Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+ G F+ NV+ + + EFR+++ + G + F GQLVDVTG + GKGF
Sbjct: 61 VTAAQAGHFAKANVAAGRTVMEFRLEEGE--YQAGDQINAEIFAAGQLVDVTGQSKGKGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV
Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA + + VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209
>gi|320322322|gb|EFW78416.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. glycinea str.
B076]
gi|320331980|gb|EFW87916.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. glycinea str.
race 4]
gi|330879369|gb|EGH13518.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 211
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 101/212 (47%), Positives = 131/212 (61%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE +
Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+ G F+ NV+ + + EFR+++ D G + F GQLVDVTG + GKGF
Sbjct: 61 VTAAQAGHFAKANVAAGRTVMEFRLEEGD--YQAGDQINAEIFAAGQLVDVTGQSKGKGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV+ LEVV
Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQALEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA + + VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209
>gi|84503642|ref|ZP_01001680.1| 50S ribosomal protein L3 [Oceanicola batsensis HTCC2597]
gi|84387939|gb|EAQ00991.1| 50S ribosomal protein L3 [Oceanicola batsensis HTCC2597]
Length = 290
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 125/215 (58%), Positives = 161/215 (74%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
+RSG++A+K+GMT ++ +G+++PVTVL LD QVV RT + +GY AVQ+GAG AK K
Sbjct: 2 LRSGIIAKKIGMTRLFMEDGKQVPVTVLQLDKLQVVAQRTAEAHGYTAVQLGAGTAKAKR 61
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SK MRG F++ +V PK+K+ EFRV D+L+ VG + ++ GQ VDV G +IGKGF
Sbjct: 62 TSKAMRGHFAAASVEPKRKIAEFRVDP-DNLIKVGEEITADHYFEGQFVDVCGTSIGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRHNFGGLRATHGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NL+VV
Sbjct: 121 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRVTTQNLQVV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D +RGLI++KG VPG+ K W+ V+D+ K
Sbjct: 181 KTDSERGLIMIKGAVPGS-KGGWVTVKDAVKKPFP 214
>gi|89053074|ref|YP_508525.1| 50S ribosomal protein L3 [Jannaschia sp. CCS1]
gi|109893433|sp|Q28UW2|RL3_JANSC RecName: Full=50S ribosomal protein L3
gi|88862623|gb|ABD53500.1| LSU ribosomal protein L3P [Jannaschia sp. CCS1]
Length = 290
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 128/215 (59%), Positives = 158/215 (73%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
+RSGV+A+K+GMT ++ +G++IPVTVL LD QVV +T D +GY AVQ+GAG AK K
Sbjct: 2 LRSGVIAKKVGMTRLFMEDGKQIPVTVLQLDKLQVVAKKTSDSDGYSAVQLGAGTAKAKR 61
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
S PMRG F+ +V PK+KL EFRV D+L+ VG ++ GQ VDVTG +IGKGF
Sbjct: 62 TSAPMRGVFAKASVEPKRKLVEFRVDA-DNLIEVGEEIIADHYFEGQFVDVTGTSIGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GAMKRHNFGGLRA+HGVSISHRSHGSTG QDPGRVFK KKMAG MG RVT +NL++V
Sbjct: 121 QGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGRVFKGKKMAGHMGAARVTTQNLQIV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D RGLI++KG VPG+ K W+ V+D+ K
Sbjct: 181 RTDTDRGLIMIKGAVPGS-KGGWVTVKDAVKKPFP 214
>gi|330988282|gb|EGH86385.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 211
Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats.
Identities = 101/212 (47%), Positives = 132/212 (62%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE +
Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEEADGYRAVQVTVGERRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+ G F+ NV+ + + EFR+++ D G + F GQLVDVTG + GKGF
Sbjct: 61 VTAAQAGHFAKANVAAGRTVMEFRLEEGD--YQAGDQINAEIFAAGQLVDVTGQSKGKGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV
Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA + + VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209
>gi|229592903|ref|YP_002875022.1| 50S ribosomal protein L3 [Pseudomonas fluorescens SBW25]
gi|259709731|sp|C3K2X6|RL3_PSEFS RecName: Full=50S ribosomal protein L3
gi|229364769|emb|CAY52766.1| 50S ribosomal protein L3 [Pseudomonas fluorescens SBW25]
Length = 211
Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats.
Identities = 101/212 (47%), Positives = 132/212 (62%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE +
Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+ G F+ NV+ + + EFR++ D G + + F GQLVDVTG + GKGF
Sbjct: 61 VTAAQAGHFAKANVAAGRTVMEFRLEDGD--YQAGDLINAEIFAAGQLVDVTGQSKGKGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV
Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA + + VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209
>gi|212288598|sp|A5V602|RL3_SPHWW RecName: Full=50S ribosomal protein L3
Length = 251
Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats.
Identities = 125/219 (57%), Positives = 156/219 (71%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+GV+A+K+GMT ++ +GR +PVTVL L+N QVV R D++GY+AVQ+GAG AK KN
Sbjct: 1 MRTGVIAKKMGMTRLFQEDGRHVPVTVLALENVQVVARREQDRDGYVAVQLGAGSAKPKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP RG F V PK + EFRV + D LL VG+ S ++ GQ VD+ G T GKGF
Sbjct: 61 LTKPERGHFGKAEVEPKAFVAEFRVSE-DGLLDVGAEISADHYVAGQFVDIQGSTQGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR FGGLRATHGVS+SHRS GSTG RQDPG+VFKNKKMAG MG T +NLE+V
Sbjct: 120 AGGMKRWGFGGLRATHGVSVSHRSLGSTGQRQDPGKVFKNKKMAGHMGDKNRTQQNLEIV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
D +RGL+ VKG VPG+ K W+LV+DS K A
Sbjct: 180 QTDAERGLLFVKGSVPGS-KGGWLLVKDSVKIAAPKDAP 217
>gi|329898794|ref|ZP_08272466.1| LSU ribosomal protein L3p (L3e) [gamma proteobacterium IMCC3088]
gi|328920746|gb|EGG28208.1| LSU ribosomal protein L3p (L3e) [gamma proteobacterium IMCC3088]
Length = 211
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 98/212 (46%), Positives = 128/212 (60%), Gaps = 1/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK GMT V+ +G IPVTV+ + +V + LD +GY A+QV G K
Sbjct: 1 MTIGLVGRKTGMTRVFTEDGVSIPVTVVEVSPNRVTQIKELDADGYRAIQVTTGTRKASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+K G ++ V L+EFR++ +D VG+ + F VGQ VDV G + GKGF
Sbjct: 61 VNKSAAGHYAKAGVEAGVGLWEFRLEAGEDAPEVGAELTVGRFEVGQKVDVAGKSKGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR NF ATHG S+SHR+ GS G Q PGRVFK KKMAG+MG VT + LEVV
Sbjct: 121 QGGVKRWNFKMQDATHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGQMGNVAVTTQGLEVV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPGA + VR + K+
Sbjct: 181 RVDAERNLLLIKGAVPGAPGGDVV-VRPAVKA 211
>gi|330505207|ref|YP_004382076.1| 50S ribosomal protein L3 [Pseudomonas mendocina NK-01]
gi|328919493|gb|AEB60324.1| 50S ribosomal protein L3 [Pseudomonas mendocina NK-01]
Length = 209
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 102/212 (48%), Positives = 134/212 (63%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M GVV RK GMT ++ EG IPVTV+ ++ +V + + +GY AVQV GE +
Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKNEESDGYRAVQVTVGERRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VSK G F+ NV+ + + EFR+++ D G + + F GQLVDVTG + GKGF
Sbjct: 61 VSKAQAGHFAKANVAAGRTVLEFRLEEGD--YQAGDLINAEIFQAGQLVDVTGQSKGKGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV
Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA ++VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGA-TGGDVIVRPAVKA 209
>gi|149203511|ref|ZP_01880481.1| 50S ribosomal protein L3 [Roseovarius sp. TM1035]
gi|149143344|gb|EDM31383.1| 50S ribosomal protein L3 [Roseovarius sp. TM1035]
Length = 280
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 122/215 (56%), Positives = 160/215 (74%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
+RSGV+A+K+GMT ++ +G+++PVTVL LD QVV RT +K+GY AVQ+GAG AK K
Sbjct: 2 LRSGVIAKKVGMTRLFLEDGKQVPVTVLQLDKLQVVAQRTPEKDGYTAVQLGAGTAKAKR 61
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++ MRG F++ V PK+K+ EFRV + L+ VG + ++ GQ VDV+G +IGKGF
Sbjct: 62 TTQAMRGHFAAAKVEPKRKIAEFRVAP-EALINVGEEITADHYFEGQFVDVSGTSIGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRHNFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NL+VV
Sbjct: 121 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRVTTQNLQVV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D RGLI++KG VPG+ K W+ ++D+ K
Sbjct: 181 KTDADRGLIMIKGAVPGS-KGGWVTIKDAVKKPFP 214
>gi|329889129|ref|ZP_08267472.1| 50S ribosomal protein L3 [Brevundimonas diminuta ATCC 11568]
gi|328844430|gb|EGF93994.1| 50S ribosomal protein L3 [Brevundimonas diminuta ATCC 11568]
Length = 247
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 124/219 (56%), Positives = 155/219 (70%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+GV+A+KLGMT V+ +G +PVTVL LD CQVV RT +++GY+A+Q+GAG K KN
Sbjct: 1 MRTGVIAKKLGMTRVFADDGAHVPVTVLQLDGCQVVGQRTKERDGYVALQLGAGVKKAKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+K R F+ V PK + EFRV +D LL VG+ S +F GQ VD+ G TIGKGF
Sbjct: 61 TAKAQREVFAKAEVEPKAYVTEFRV-GEDALLDVGAELSADHFLAGQKVDIQGHTIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKR NFGGLRA+HGVSISHRSHGSTG RQDPG+VFK KKMAG +G VT +NL VV
Sbjct: 120 AGAMKRWNFGGLRASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHLGQEVVTTQNLTVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
VD +RGLIL+KG VPG +++ + D+ K A
Sbjct: 180 RVDAERGLILIKGAVPG-HDGAYVKISDAIKKARPADAP 217
>gi|77461300|ref|YP_350807.1| 50S ribosomal protein L3 [Pseudomonas fluorescens Pf0-1]
gi|109893541|sp|Q3K5Y8|RL3_PSEPF RecName: Full=50S ribosomal protein L3
gi|77385303|gb|ABA76816.1| 50S ribosomal protein L3 [Pseudomonas fluorescens Pf0-1]
Length = 211
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 100/212 (47%), Positives = 133/212 (62%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE +
Sbjct: 1 MTIGVVGRKAGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+ G F+ NV+ + + EFR+++ + G + + F GQLVDVTG + GKGF
Sbjct: 61 VTAAQAGHFAKANVAAGRTVMEFRLEEGE--YQAGDLINAEIFAAGQLVDVTGQSKGKGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV
Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA + + VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209
>gi|146297285|ref|YP_001181056.1| 50S ribosomal protein L3 [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|166233129|sp|A4XLT0|RL3_CALS8 RecName: Full=50S ribosomal protein L3
gi|145410861|gb|ABP67865.1| LSU ribosomal protein L3P [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 210
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 100/213 (46%), Positives = 134/213 (62%), Gaps = 3/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT V++ G+ +PVTV+ C VV +T++K+GY A+QVG + K
Sbjct: 1 MTKGILGKKIGMTQVFDEAGKVVPVTVIEAGPCVVVQKKTVEKDGYAAIQVGFEDIKETK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP+RG F+ V PK+ L E R+ KD D VG F+ G+ VDVTG++ KGF
Sbjct: 61 LNKPLRGHFAKHGVKPKRYLRELRL-KDADKYEVGQEIRVDIFSPGERVDVTGISKAKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH +HG S+ HR GS G P R F KKM GRMGG RVTV NL+VV
Sbjct: 120 QGVIKRHGQQRGPMSHG-SMYHRRVGSMGSNTFPARTFPGKKMPGRMGGQRVTVLNLQVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD +R L+LVKG VPG KNS +++RDS KS
Sbjct: 179 KVDPERNLLLVKGSVPG-NKNSLLIIRDSVKSK 210
>gi|260425273|ref|ZP_05779253.1| 50S ribosomal protein L3 [Citreicella sp. SE45]
gi|260423213|gb|EEX16463.1| 50S ribosomal protein L3 [Citreicella sp. SE45]
Length = 280
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 128/215 (59%), Positives = 162/215 (75%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
+RSGV+A+K+GMT ++ +G++IPVTVL LD CQVV RT DK+GY AVQ+GAG K KN
Sbjct: 2 LRSGVIAKKVGMTRLFMEDGKQIPVTVLQLDGCQVVAQRTADKDGYTAVQLGAGSIKAKN 61
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VS PMRG F+ V PK+K+ EFRV ++L+ VG + ++ GQ VDV+G TIGKGF
Sbjct: 62 VSNPMRGHFAVAKVEPKRKIAEFRVDA-ENLIRVGEEITADHYFEGQFVDVSGTTIGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRHNFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NL+VV
Sbjct: 121 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRVTTQNLQVV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D RG+I++KG VPG+ K W+ ++D+ K
Sbjct: 181 KTDADRGIIMIKGAVPGS-KGGWVTIKDAVKKPFP 214
>gi|114764144|ref|ZP_01443382.1| 50S ribosomal protein L3 [Pelagibaca bermudensis HTCC2601]
gi|114543296|gb|EAU46312.1| 50S ribosomal protein L3 [Roseovarius sp. HTCC2601]
Length = 280
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 131/215 (60%), Positives = 163/215 (75%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT ++ +G+++PVTVL LD CQVV RT DK+GY AVQ+GAG K KN
Sbjct: 2 MRSGVIAKKVGMTRLFLEDGKQVPVTVLQLDGCQVVAQRTSDKDGYTAVQLGAGSVKAKN 61
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VSKPMRG F+ V PK+K+ EFRV ++L+ VG + ++ GQ VDV+G TIGKGF
Sbjct: 62 VSKPMRGHFAIAKVEPKRKIAEFRVDA-ENLIGVGEEITADHYFEGQFVDVSGTTIGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRHNFGGLRATHGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NL+VV
Sbjct: 121 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRVTTQNLQVV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D RGLI++KG VPG+ K W+ ++D+ K
Sbjct: 181 KTDASRGLIMIKGAVPGS-KGGWVTIKDAVKKPFP 214
>gi|152998271|ref|YP_001343106.1| 50S ribosomal protein L3 [Marinomonas sp. MWYL1]
gi|189042850|sp|A6W392|RL3_MARMS RecName: Full=50S ribosomal protein L3
gi|150839195|gb|ABR73171.1| ribosomal protein L3 [Marinomonas sp. MWYL1]
Length = 212
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 96/212 (45%), Positives = 135/212 (63%), Gaps = 1/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M +V RK GMT ++ +G +PVTV+ ++ +V +T + +GY AVQV G +
Sbjct: 1 MAIQLVGRKAGMTRIFTEDGVSVPVTVIEVEPNRVTQVKTAETDGYQAVQVTVGSRRSSR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+K G ++ NV + L+EFR+ D+ + VG + + F Q+VDVTG + GKGF
Sbjct: 61 VNKAAAGHYAKANVEAGRGLWEFRLAGDEKEINVGDELTVADFESIQMVDVTGQSKGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRHNF ATHG S+SHR+ GS G Q PGRV+K KKMAG MG +VT ++LEVV
Sbjct: 121 QGAIKRHNFSMQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGHMGAAQVTTQSLEVV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R LILVKG VPGA N ++++ + K+
Sbjct: 181 RVDTERNLILVKGAVPGAV-NGDVILQSAVKA 211
>gi|254237126|ref|ZP_04930449.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa C3719]
gi|126169057|gb|EAZ54568.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa C3719]
Length = 211
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 100/212 (47%), Positives = 136/212 (64%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV AGE +
Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEVEPNRVTQFKTEETDGYRAVQVTAGERRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+K G F+ NV+ + ++EFR+ ++ VG + F GQ+VDVTG + GKGF
Sbjct: 61 VTKAQAGHFAKANVAAGRGVWEFRL--GEEQYAVGDQITVDLFQAGQMVDVTGESKGKGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G +G RVTV++LE+V
Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHLGAERVTVQSLEIV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA ++VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGA-TGGDVIVRPAAKA 209
>gi|71736464|ref|YP_276706.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. phaseolicola
1448A]
gi|109893538|sp|Q48D36|RL3_PSE14 RecName: Full=50S ribosomal protein L3
gi|71557017|gb|AAZ36228.1| ribosomal protein L3 [Pseudomonas syringae pv. phaseolicola 1448A]
Length = 211
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 100/212 (47%), Positives = 132/212 (62%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE +
Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+ G F+ NV+ + + EFR+++ D G + F GQLVDVTG + GKGF
Sbjct: 61 VTAAQAGHFAKANVAAGRTVMEFRLEEGD--YQAGDQINAEIFAAGQLVDVTGQSKGKGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LE+V
Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLELV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA + + VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209
>gi|146281170|ref|YP_001171323.1| 50S ribosomal protein L3 [Pseudomonas stutzeri A1501]
gi|166233183|sp|A4VHN0|RL3_PSEU5 RecName: Full=50S ribosomal protein L3
gi|145569375|gb|ABP78481.1| ribosomal protein L3 [Pseudomonas stutzeri A1501]
gi|327479323|gb|AEA82633.1| 50S ribosomal protein L3 [Pseudomonas stutzeri DSM 4166]
Length = 211
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 100/212 (47%), Positives = 134/212 (63%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M GVV RK GMT V+ +G IPVTV+ ++ +V + + +GY AVQV GE +
Sbjct: 1 MTIGVVGRKCGMTRVFTEDGVSIPVTVIEIEPNRVTQFKNEESDGYRAVQVTVGERRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+K G F+ NV+ + ++EFR++ ++ VG + F GQLVDVTG + GKGF
Sbjct: 61 VTKAQAGHFAKANVAAGRGVWEFRLEGEE--FQVGDQINAEIFQAGQLVDVTGQSKGKGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LE+V
Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEIV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA + VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGA-TGGDVFVRPAVKA 209
>gi|90020607|ref|YP_526434.1| 50S ribosomal protein L3 [Saccharophagus degradans 2-40]
gi|109893552|sp|Q21M57|RL3_SACD2 RecName: Full=50S ribosomal protein L3
gi|89950207|gb|ABD80222.1| LSU ribosomal protein L3P [Saccharophagus degradans 2-40]
Length = 214
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 97/215 (45%), Positives = 133/215 (61%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK GMT ++ +G +PVTV+ +D ++ ++++ +GY AVQV G +
Sbjct: 1 MTIGIVGRKSGMTRIFTDDGLSVPVTVVEVDPNRITQVKSVETDGYAAVQVTVGSRRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VSKP G F+ V + + E R + + VG + + F GQ VDVTG + GKGF
Sbjct: 61 VSKPEAGHFAKAEVEAGRTVLELRNESGE-QFEVGGLLTVEAFEAGQKVDVTGASKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR+NF ATHG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLEVV
Sbjct: 120 AGVIKRYNFRMQDATHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAARVTTQNLEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
VD +R L+L+KG VPGA +++R + KS N
Sbjct: 180 RVDVERNLLLIKGAVPGAP-GGDVIIRPAVKSRNN 213
>gi|146308923|ref|YP_001189388.1| 50S ribosomal protein L3 [Pseudomonas mendocina ymp]
gi|166233181|sp|A4XZ90|RL3_PSEMY RecName: Full=50S ribosomal protein L3
gi|145577124|gb|ABP86656.1| LSU ribosomal protein L3P [Pseudomonas mendocina ymp]
Length = 209
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 102/212 (48%), Positives = 134/212 (63%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M GVV RK GMT ++ EG IPVTV+ ++ +V + + +GY AVQV GE +
Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKNEESDGYRAVQVTVGERRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VSK G F+ NV+ + + EFR+++ D G + + F GQLVDVTG + GKGF
Sbjct: 61 VSKAQAGHFAKANVAAGRTVMEFRLEEGD--YQAGDLINAEIFQAGQLVDVTGQSKGKGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV
Sbjct: 119 AGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA ++VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGA-TGGDVIVRPAVKA 209
>gi|332139848|ref|YP_004425586.1| 50S ribosomal protein L3 [Alteromonas macleodii str. 'Deep
ecotype']
gi|332139861|ref|YP_004425599.1| 50S ribosomal protein L3 [Alteromonas macleodii str. 'Deep
ecotype']
gi|226725125|sp|B4RZN2|RL3_ALTMD RecName: Full=50S ribosomal protein L3
gi|327549870|gb|AEA96588.1| 50S ribosomal protein L3 [Alteromonas macleodii str. 'Deep
ecotype']
gi|327549883|gb|AEA96601.1| 50S ribosomal protein L3 [Alteromonas macleodii str. 'Deep
ecotype']
Length = 212
Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 96/213 (45%), Positives = 135/213 (63%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ +G IPVTV+ +V RT + +GY A+QV AG K
Sbjct: 1 MAIGLVGRKVGMTRIFTEDGTSIPVTVIEATPNRVTQLRTEESDGYRALQVTAGTKKANR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
++K G F+ V + L EFR+++++ + VGS + F + +DVTG + GKG
Sbjct: 61 INKAEAGHFAKAGVEAGRTLVEFRLEENEGADIEVGSEITVEIFNDTKKIDVTGTSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F GA+KR NF R THG S+SHR+ GS G Q PG+VFK KKMAG++G +VT ++LEV
Sbjct: 121 FQGAIKRWNFSSQRMTHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQLGNKQVTTQSLEV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD + GLILVKG VPGA N ++V+ + K+
Sbjct: 181 VRVDVENGLILVKGAVPGATGND-VIVKPAVKA 212
>gi|157960014|ref|YP_001500048.1| 50S ribosomal protein L3 [Shewanella pealeana ATCC 700345]
gi|189029481|sp|A8GYX6|RL3_SHEPA RecName: Full=50S ribosomal protein L3
gi|157845014|gb|ABV85513.1| ribosomal protein L3 [Shewanella pealeana ATCC 700345]
Length = 212
Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 94/213 (44%), Positives = 132/213 (61%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT ++N +G +PVTV+ + +V RTLD +GY A+QV G K
Sbjct: 1 MAIGLIGRKVGMTRIFNEDGASVPVTVIEIAANRVTQVRTLDTDGYRALQVTTGTKKANR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
++KP G F+ V + L+E R+ + + + VG+ + F VDVTG + GKG
Sbjct: 61 ITKPEAGHFAKAGVEAGRGLWEMRLADGEGEGIEVGAELNVDIFADIAKVDVTGQSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KR NF ATHG S++HR++GS G Q PGRVFK KKM+G MG RVT +NLEV
Sbjct: 121 FQGGIKRWNFATQDATHGNSLAHRANGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLEV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+ VD +R L+LVKG VPGA I ++ + K+
Sbjct: 181 IRVDAERNLLLVKGAVPGATNGDLI-IKPAVKA 212
>gi|167626039|ref|YP_001676333.1| 50S ribosomal protein L3 [Shewanella halifaxensis HAW-EB4]
gi|189029480|sp|B0TM12|RL3_SHEHH RecName: Full=50S ribosomal protein L3
gi|167356061|gb|ABZ78674.1| ribosomal protein L3 [Shewanella halifaxensis HAW-EB4]
Length = 212
Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 95/213 (44%), Positives = 132/213 (61%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT ++N +G +PVTV+ + +V RTLD +GY A+QV G K
Sbjct: 1 MAIGLIGRKVGMTRIFNEDGASVPVTVIEIAANRVTQVRTLDTDGYRALQVTTGTKKANR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
++KP G F+ V + L+E R+ + + + VG+ + F VDVTG + GKG
Sbjct: 61 ITKPEAGHFAKAGVEAGRGLWEMRLADGEGEGIEVGAELNVDIFADIAKVDVTGQSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KR NF ATHG S++HRS+GS G Q PGRVFK KKM+G MG RVT +NLEV
Sbjct: 121 FQGGIKRWNFAMQDATHGNSLAHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLEV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+ VD +R L+LVKG VPGA I ++ + K+
Sbjct: 181 IRVDAERNLLLVKGAVPGATNGDLI-IKPAVKA 212
>gi|221133614|ref|ZP_03559919.1| 50S ribosomal subunit protein L3 [Glaciecola sp. HTCC2999]
Length = 212
Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 95/213 (44%), Positives = 129/213 (60%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ +G IPVTV+ +V RT + +GY A+QV AG K
Sbjct: 1 MAIGLVGRKVGMTRIFTEDGVSIPVTVIEATPNRVTQLRTEETDGYRALQVTAGTKKANR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+K G F+ V L+EFR+ + + + VGS + F VDV G + GKG
Sbjct: 61 VNKAEAGHFAKAGVEAGSGLWEFRLDDSEGENIEVGSEITVELFNDTNKVDVVGTSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F GA+KR NF R THG S+SHR+ GS G Q PG+VFK KKMAG++G RVT +LE+
Sbjct: 121 FQGAIKRWNFSSQRMTHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQLGNKRVTTISLEL 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD + L+L+KG VPGA S ++VR + K+
Sbjct: 181 VRVDVENNLLLIKGAVPGA-TGSDVIVRPAVKA 212
>gi|239995000|ref|ZP_04715524.1| 50S ribosomal subunit protein L3 [Alteromonas macleodii ATCC 27126]
Length = 212
Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 96/213 (45%), Positives = 135/213 (63%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ +G IPVTV+ +V RT + +GY A+QV AG K
Sbjct: 1 MAIGLVGRKVGMTRIFTEDGTSIPVTVIEATPNRVTQLRTEETDGYRALQVTAGTKKANR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
++K G F+ V + L EFR+++++ + VGS + F + +DVTG + GKG
Sbjct: 61 INKAEAGHFAKAGVEAGRTLVEFRLEENEGADIEVGSEITVEIFNDTKKIDVTGTSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F GA+KR NF R THG S+SHR+ GS G Q PG+VFK KKMAG++G +VT ++LEV
Sbjct: 121 FQGAIKRWNFSSQRMTHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQLGNKQVTTQSLEV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD + GLILVKG VPGA N ++V+ + K+
Sbjct: 181 VRVDVENGLILVKGAVPGATGND-VIVKPAVKA 212
>gi|312963368|ref|ZP_07777851.1| 50S ribosomal protein L3 [Pseudomonas fluorescens WH6]
gi|311282448|gb|EFQ61046.1| 50S ribosomal protein L3 [Pseudomonas fluorescens WH6]
Length = 211
Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 101/212 (47%), Positives = 132/212 (62%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE +
Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+ G F+ NV+ + + EFR++ D G + + F GQLVDVTG + GKGF
Sbjct: 61 VTAAQAGHFAKANVAAGRTVMEFRLEDGD--YKAGDLINAEIFAAGQLVDVTGQSKGKGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV
Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA + + VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209
>gi|103488295|ref|YP_617856.1| 50S ribosomal protein L3 [Sphingopyxis alaskensis RB2256]
gi|123078063|sp|Q1GP99|RL3_SPHAL RecName: Full=50S ribosomal protein L3
gi|98978372|gb|ABF54523.1| LSU ribosomal protein L3P [Sphingopyxis alaskensis RB2256]
Length = 257
Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 128/219 (58%), Positives = 161/219 (73%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+GV+A+K+GMT ++ +GR +PVTVL L+ CQVV R +++GY+AVQ+GAG AK KN
Sbjct: 1 MRTGVIAKKMGMTRLFQDDGRHVPVTVLSLEGCQVVSVRDKERDGYVAVQLGAGTAKAKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP RG + V PK KL EFRV DD L VG+ S +F GQ+VD+ G+T GKGF
Sbjct: 61 VAKPQRGAYGKAEVEPKAKLVEFRV-ADDATLDVGAELSADHFVAGQMVDIQGVTQGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKR FGG+RATHGVSISHR+HGSTG RQDPGRVFKNKKMAG MG T +NLE+V
Sbjct: 120 AGAMKRWGFGGMRATHGVSISHRAHGSTGNRQDPGRVFKNKKMAGHMGARNRTQQNLEIV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
D +RGL+ VKG VPG+ K W+LVRD+ K + +
Sbjct: 180 RTDAERGLLFVKGSVPGS-KGGWLLVRDAVKLPRHPEAP 217
>gi|262273379|ref|ZP_06051193.1| LSU ribosomal protein L3p (L3e) [Grimontia hollisae CIP 101886]
gi|262222357|gb|EEY73668.1| LSU ribosomal protein L3p (L3e) [Grimontia hollisae CIP 101886]
Length = 209
Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 96/211 (45%), Positives = 133/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V RK+GMT ++ EG IPVTV+ ++ +V RT + +GY A+QV G K +
Sbjct: 1 MIGLVGRKVGMTRIFTEEGVSIPVTVVEVETNRVTQVRTPEVDGYSAIQVTTGVKKASRI 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRLENGEE-FEVGAELNVDLFADIKKVDVTGTSKGKGFQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
GA+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V
Sbjct: 120 GAVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPGA S ++V+ + K+
Sbjct: 180 VDAERKLLLIKGAVPGA-TGSNVIVKPAVKA 209
>gi|71278595|ref|YP_267622.1| 50S ribosomal protein L3 [Colwellia psychrerythraea 34H]
gi|109893422|sp|Q487Z3|RL3_COLP3 RecName: Full=50S ribosomal protein L3
gi|71144335|gb|AAZ24808.1| ribosomal protein L3 [Colwellia psychrerythraea 34H]
Length = 212
Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 95/213 (44%), Positives = 137/213 (64%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT V+ +G PVTV+ ++ +V +T+D +GY A+QV G+ K
Sbjct: 1 MTIGLVGRKVGMTRVFTEDGVSTPVTVIEVEANRVAQVKTVDNDGYSALQVTTGKRKASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP G F+ + + L+EFR+ +++ + GS + F +LVDVTG + GKG
Sbjct: 61 VTKPAAGHFAKAGIEAGRGLWEFRLNENEGSDIEAGSEITVEVFNDTKLVDVTGTSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KR NF ATHGVS+SHRS+GS G Q PGRVFK KKM+G MG R T +NLE+
Sbjct: 121 FQGGIKRWNFTMQHATHGVSLSHRSNGSLGQCQTPGRVFKGKKMSGHMGAVRCTTQNLEL 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD +R L+L+KG VPGA + ++++ + K+
Sbjct: 181 VRVDAERNLLLIKGAVPGAINGN-VIIKPAVKA 212
>gi|332172249|gb|AEE21503.1| 50S ribosomal protein L3 [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 212
Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 92/213 (43%), Positives = 134/213 (62%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT ++ +G IPVTV+ +V RT + +GY A+QV AG+ K
Sbjct: 1 MAIGLIGRKVGMTRIFTEDGVSIPVTVIEATPNRVTQLRTDETDGYTALQVTAGDKKASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+K G F+ V + L+EFR+ + + + VGS + F ++VDV G + GKG
Sbjct: 61 VNKAEAGHFAKAGVEAGRGLWEFRLDGTEGEGIEVGSEITVEIFAETKMVDVAGTSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F GA+KR NF R +HG S+SHR+ GS G Q PG+VFK KKMAG+MG RVTV++L+V
Sbjct: 121 FQGAIKRWNFSHQRNSHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQMGNKRVTVQSLDV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD + L+LV+G VPGA ++++ + K+
Sbjct: 181 VRVDAENNLLLVRGNVPGAP-GGDVIIKAAVKA 212
>gi|254466883|ref|ZP_05080294.1| ribosomal protein L3 [Rhodobacterales bacterium Y4I]
gi|206687791|gb|EDZ48273.1| ribosomal protein L3 [Rhodobacterales bacterium Y4I]
Length = 234
Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 132/215 (61%), Positives = 162/215 (75%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSG++A+K+GMT ++ +G++IPVTVLHLD QVV RT DK+GY AVQ+GAG AK K
Sbjct: 1 MRSGIIAKKVGMTRLFMEDGKQIPVTVLHLDGLQVVAQRTEDKDGYTAVQLGAGTAKAKR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
S+ MRG F++ V PK+KL EFRV D L+ VG+ S +F GQ VDVTG +IGKGF
Sbjct: 61 TSQAMRGHFAAAKVEPKRKLVEFRV-PADALIEVGAEISAEHFLAGQKVDVTGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRHNFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV
Sbjct: 120 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D +RGL+ +KG VPG K+ W+ V+D+ K
Sbjct: 180 KTDAERGLVFIKGAVPGP-KSGWVTVKDAVKKKAP 213
>gi|163796919|ref|ZP_02190876.1| Ribosomal protein L3 [alpha proteobacterium BAL199]
gi|159177908|gb|EDP62457.1| Ribosomal protein L3 [alpha proteobacterium BAL199]
Length = 249
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 130/215 (60%), Positives = 161/215 (74%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSG++A+K+GMT V+ EG +PVTVL +D CQVV RT DK+GY AVQ+G G K K+
Sbjct: 1 MRSGMIAQKVGMTRVFTDEGTHVPVTVLKVDGCQVVSVRTQDKDGYTAVQLGVGVRKPKH 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KPMRG F+ V PK+KL EFRV + D LL VG+ S +F GQ VDVTG +IGKGF
Sbjct: 61 TTKPMRGHFAKAGVEPKRKLVEFRVTE-DALLDVGAELSVEHFVAGQKVDVTGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRHNF GLRA+HGVS+SHRSHGSTG QDPGRV+K KKMAG MG RVT +NL +V
Sbjct: 120 AGAMKRHNFSGLRASHGVSLSHRSHGSTGNNQDPGRVWKGKKMAGHMGDVRVTTQNLVIV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
S D +RGLILV+G VPG+ W+L+ D+ K+ +
Sbjct: 180 STDAERGLILVRGAVPGSD-GGWVLLSDAVKAKLP 213
>gi|109896798|ref|YP_660053.1| ribosomal protein L3 [Pseudoalteromonas atlantica T6c]
gi|123171764|sp|Q15YN9|RL3_PSEA6 RecName: Full=50S ribosomal protein L3
gi|109699079|gb|ABG38999.1| LSU ribosomal protein L3P [Pseudoalteromonas atlantica T6c]
Length = 212
Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats.
Identities = 92/213 (43%), Positives = 135/213 (63%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT ++ +G IPVTV+ +V RT + +GY A+QV AG+ K
Sbjct: 1 MAIGLIGRKVGMTRIFTEDGVSIPVTVIEATPNRVTQLRTDETDGYTALQVTAGDKKANR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+K G F+ V + L+EFR+ ++ + + VGS + F ++VDV G + GKG
Sbjct: 61 VNKAAAGHFAKAGVEAGRGLWEFRLDGNEGEGIEVGSEITVEIFAETKMVDVAGTSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F GA+KR NF R +HG S+SHR+ GS G Q PG+VFK KKMAG+MG RVTV++L+V
Sbjct: 121 FQGAIKRWNFSHQRNSHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQMGNKRVTVQSLDV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD + L+LV+G VPGA ++++ + K+
Sbjct: 181 VRVDAENNLLLVRGNVPGAP-GGDVIIKAAVKA 212
>gi|145300935|ref|YP_001143776.1| 50S ribosomal protein L3 [Aeromonas salmonicida subsp. salmonicida
A449]
gi|166233113|sp|A4ST06|RL3_AERS4 RecName: Full=50S ribosomal protein L3
gi|142853707|gb|ABO92028.1| ribosomal protein L3 [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 210
Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats.
Identities = 94/212 (44%), Positives = 133/212 (62%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ +G IPVTV+ ++ +V ++++ +GY A+QV G K
Sbjct: 1 MTIGLVGRKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKSVETDGYNAIQVTTGAKKASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP G F+ V + L+EFR+ + VGS ++VDVTG + GKGF
Sbjct: 61 VTKPEAGHFAKAGVEAGRGLWEFRLNNGE-TFTVGSELKVDLLADVKMVDVTGTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KRHNF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V
Sbjct: 120 AGTVKRHNFRTQDMTHGNSLSHRAPGSIGQNQTPGRVFKGKKMAGHMGAERVTTQNLELV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPGA + ++V+ + K+
Sbjct: 180 RVDAERNLLLIKGAVPGATNGN-VIVKPAVKA 210
>gi|254294440|ref|YP_003060463.1| ribosomal protein L3 [Hirschia baltica ATCC 49814]
gi|254042971|gb|ACT59766.1| ribosomal protein L3 [Hirschia baltica ATCC 49814]
Length = 243
Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats.
Identities = 128/215 (59%), Positives = 160/215 (74%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+G++A+KLGMT V+ +G IPVTVL LD CQVV RT +++GY+A+Q+GAG K KN
Sbjct: 1 MRTGLLAKKLGMTRVFGEDGAHIPVTVLQLDGCQVVGQRTKERDGYVALQLGAGSRKAKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KPMRG F++ V PK L EFRV + D L+ VG+ FS +F GQ VD+ G GKGF
Sbjct: 61 VTKPMRGQFAAAKVEPKAVLREFRVDE-DMLVDVGAEFSAEHFVPGQKVDIAGTAKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKR NFGGLRA+HGVSISHR+ GSTG QDPG+VFK KKMAG+ G R+T +N+EVV
Sbjct: 120 AGAMKRWNFGGLRASHGVSISHRALGSTGQCQDPGKVFKGKKMAGQYGNVRITTQNIEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
VD RGL+LVKG VP + KN W+ VRD+ K A
Sbjct: 180 RVDADRGLVLVKGAVP-SAKNGWVEVRDAVKKAAP 213
>gi|330827883|ref|YP_004390835.1| 50S ribosomal protein L3 [Aeromonas veronii B565]
gi|328803019|gb|AEB48218.1| 50S ribosomal protein L3 [Aeromonas veronii B565]
Length = 210
Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats.
Identities = 95/212 (44%), Positives = 132/212 (62%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ +G IPVTV+ ++ +V ++++ +GY A+QV G K
Sbjct: 1 MTIGLVGRKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKSVETDGYNAIQVTTGAKKASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP G F+ V + L+EFR+ + VGS +LVDVTG + GKGF
Sbjct: 61 VTKPEAGHFAKAGVEAGRGLWEFRLNNGE-TFTVGSELKVDLLADVKLVDVTGTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KRHNF THG S+SHR GS G Q PGRVFK KKMAG MG RVT +NLE+V
Sbjct: 120 AGTVKRHNFRTQDMTHGNSLSHRVPGSIGQNQTPGRVFKGKKMAGHMGAERVTTQNLELV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPGA + ++V+ + K+
Sbjct: 180 RVDAERNLLLIKGAVPGATNGN-VIVKPAVKA 210
>gi|297537531|ref|YP_003673300.1| 50S ribosomal protein L3 [Methylotenera sp. 301]
gi|297256878|gb|ADI28723.1| 50S ribosomal protein L3 [Methylotenera sp. 301]
Length = 219
Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats.
Identities = 86/215 (40%), Positives = 130/215 (60%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ +G IPVTVL + +V +T+ +GY +QV G +
Sbjct: 1 MSLGLIGRKVGMTRVFTEDGASIPVTVLEVVPNRVTQIKTIASDGYTGLQVAYGTRRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
++ + G ++ + + EF V D G+ + F GQ+VDVTG+++GKG
Sbjct: 61 INSALTGHYAKSGSAAGAGIHEFPVTSDVLANYTAGANITVDIFQAGQIVDVTGISLGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+GA+KRH+F RA+HG S SH GS G QDPGRVF K+M G +G +VT +NLE+
Sbjct: 121 FAGAIKRHHFKSNRASHGNSKSHNVPGSIGMAQDPGRVFPGKRMPGHLGATKVTTQNLEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V VD +R L+L+KG +PG+ K ++VR + K+ +
Sbjct: 181 VRVDAERNLLLIKGAIPGS-KGGDVVVRPAIKAKL 214
>gi|297181138|gb|ADI17335.1| hypothetical protein [uncultured Oceanospirillales bacterium
HF0070_21F08]
Length = 211
Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats.
Identities = 98/213 (46%), Positives = 130/213 (61%), Gaps = 3/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M GV+ RK GMT V+ EG +PVTV+ + +V +T + +GY AVQV GE +
Sbjct: 1 MAIGVIGRKCGMTRVFTEEGISVPVTVIEVTPNRVSQVKTEETDGYEAVQVTVGERRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP G F+ V + EFR + L GS + F GQ VDVTG + GKGF
Sbjct: 61 VTKPQAGHFAKAGVEAGRSAGEFR--SEVGELQAGSEITLEVFEAGQSVDVTGTSKGKGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR NF ATHG S+SHR+ GS G Q PGRVFK KKM+G +G RVTV+NLE+V
Sbjct: 119 AGTVKRWNFRTQDATHGNSLSHRAPGSIGQNQTPGRVFKGKKMSGHLGAERVTVQNLEIV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD ++ L+LVKG +PGA ++VR + K+
Sbjct: 179 RVDAEKNLLLVKGAIPGAA-GGDVIVRPAVKAK 210
>gi|89095538|ref|ZP_01168443.1| 50S ribosomal protein L3 [Oceanospirillum sp. MED92]
gi|89080213|gb|EAR59480.1| 50S ribosomal protein L3 [Oceanospirillum sp. MED92]
Length = 212
Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats.
Identities = 99/212 (46%), Positives = 135/212 (63%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK GMT V+N +G +PVTV+ ++ +V +T + +GY AVQV G K
Sbjct: 1 MTVGLIGRKAGMTRVFNEDGVSVPVTVIEVEPNRVTAVKTEETDGYAAVQVTTGGKKANR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+SKP G F+ V + L+EFR+ D+ + VG + + F GQ VDVTG + GKGF
Sbjct: 61 LSKPEAGNFAKAGVEAGRGLWEFRLSGGDE-VNVGEELTVARFEAGQKVDVTGQSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR NF ATHG S+SHR+ GS G Q PGRV+K KKMAG+MG RVTV+ LEVV
Sbjct: 120 QGGVKRWNFSMQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGQMGNERVTVQTLEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPGA ++V+ + K+
Sbjct: 180 RVDAERNLLLIKGAVPGA-TGGDVIVKPAVKA 210
>gi|170729009|ref|YP_001763035.1| 50S ribosomal protein L3 [Shewanella woodyi ATCC 51908]
gi|226730568|sp|B1KMY3|RL3_SHEWM RecName: Full=50S ribosomal protein L3
gi|169814356|gb|ACA88940.1| ribosomal protein L3 [Shewanella woodyi ATCC 51908]
Length = 212
Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats.
Identities = 94/213 (44%), Positives = 132/213 (61%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT ++ +G IPVTV+ + +V RTL+ +GY A+QV G K
Sbjct: 1 MAIGLIGRKVGMTRIFTEDGASIPVTVIEIAANRVTQVRTLETDGYRALQVTTGTKKANR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
++KP G F+ V + L+E R+ D+ + + VG+ + F VDVTG + GKG
Sbjct: 61 ITKPEAGHFAKAGVEAGRGLWEVRLADDEGEGIEVGAELNVDIFADVAKVDVTGQSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KR NF THG S++HRS+GS G Q PGRVFK KKM+G MG RVT +NL+V
Sbjct: 121 FQGGIKRWNFHAQDMTHGNSLAHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLDV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD +R L+LVKG VPGA + I ++ + K+
Sbjct: 181 VRVDAERNLLLVKGAVPGATNGNLI-IKPAVKA 212
>gi|58038855|ref|YP_190819.1| 50S ribosomal protein L3 [Gluconobacter oxydans 621H]
gi|81819160|sp|Q5FTY3|RL3_GLUOX RecName: Full=50S ribosomal protein L3
gi|58001269|gb|AAW60163.1| LSU ribosomal protein L3P [Gluconobacter oxydans 621H]
Length = 227
Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats.
Identities = 127/219 (57%), Positives = 163/219 (74%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+G++A+KLGMT ++ +G +PVTVLHLDN +VV RT +++GY A+Q+G G AKVKN
Sbjct: 1 MRTGLIAKKLGMTRLFKEDGTHVPVTVLHLDNVEVVDARTNERDGYTAIQLGLGNAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+K RG F+ V PK+ L EFRV + D LL G+ S ++F VGQ VDVTG + GKGF
Sbjct: 61 VTKANRGHFARTKVEPKRHLAEFRVSE-DALLEAGTKLSAAHFVVGQKVDVTGQSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG RVT NLE+
Sbjct: 120 AGVMKRHNFAGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGDERVTTLNLEIA 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
+VD++R LI+V+G +PGA KN +L+RD+ K A +
Sbjct: 180 AVDEERNLIMVRGAIPGA-KNGLVLIRDAIKKARHADAP 217
>gi|118595335|ref|ZP_01552682.1| 50S ribosomal protein L3 [Methylophilales bacterium HTCC2181]
gi|118441113|gb|EAV47740.1| 50S ribosomal protein L3 [Methylophilales bacterium HTCC2181]
Length = 216
Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats.
Identities = 100/212 (47%), Positives = 135/212 (63%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ EG IPVTVL + +V + ++ +GY ++Q+ G +K
Sbjct: 1 MSLGLIGRKVGMTRVFTDEGASIPVTVLEVVPNRVTQIKKINSDGYSSLQLAYGRSKSTK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
++K + G ++ +V L E R+ +++ S S F VGQ VDVTG TIGKG
Sbjct: 61 LNKSLVGHYAKASVEAGLGLHELRLSEEEISNYTNESSLSVEIFQVGQKVDVTGTTIGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KRH+F RATHGVSISH SHGSTG QDPGRVF KKMAG +G + T +NLEV
Sbjct: 121 FQGPIKRHHFSSNRATHGVSISHNSHGSTGQCQDPGRVFPGKKMAGHLGDKKRTTQNLEV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
V +D R LIL+KG VPG+ K S +L+R + K
Sbjct: 181 VRIDSPRNLILIKGAVPGS-KGSDVLIRPAVK 211
>gi|114771269|ref|ZP_01448689.1| 50S ribosomal protein L3 [alpha proteobacterium HTCC2255]
gi|114548194|gb|EAU51081.1| 50S ribosomal protein L3 [alpha proteobacterium HTCC2255]
Length = 247
Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats.
Identities = 126/215 (58%), Positives = 159/215 (73%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT ++ +G+++PVTVL ++N QVV RT + +GY AVQ+GAG AK K
Sbjct: 1 MRSGVIAKKIGMTRLFMEDGKQVPVTVLQMENLQVVSQRTNETDGYTAVQLGAGVAKAKR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
S MRG F+ V PK+K+ EFRV D+L+ VG ++F GQ VDV+G +IGKGF
Sbjct: 61 QSAAMRGHFAKAKVEPKRKIAEFRVSA-DNLIEVGEEIVANHFLDGQKVDVSGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRHNFGGLRATHGVS+SHRSHGSTG Q+PG+VFK KKMAG MG RVT +NLEVV
Sbjct: 120 AGAMKRHNFGGLRATHGVSVSHRSHGSTGQCQEPGKVFKGKKMAGHMGSARVTTQNLEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D RGLI++KG VPG+ K W+ V+DS K
Sbjct: 180 RTDIDRGLIMIKGAVPGS-KGGWVTVKDSVKKKAP 213
>gi|289623849|ref|ZP_06456803.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|330869431|gb|EGH04140.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. aesculi str.
0893_23]
Length = 211
Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats.
Identities = 101/212 (47%), Positives = 133/212 (62%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M GVV RK GMT ++ EG IPVTV+ +++ +V +T + +GY AVQV GE +
Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIESNRVTQFKTEETDGYRAVQVTVGERRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+ G F+ NV+ + + EFR+++ D G + F GQLVDVTG + GKGF
Sbjct: 61 VTAAQAGHFAKANVAAGRTVMEFRLEEGD--YQAGDQINAEIFAAGQLVDVTGQSKGKGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV
Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA + + VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209
>gi|149915844|ref|ZP_01904368.1| 30S ribosomal protein S10 [Roseobacter sp. AzwK-3b]
gi|149810167|gb|EDM70013.1| 30S ribosomal protein S10 [Roseobacter sp. AzwK-3b]
Length = 276
Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats.
Identities = 124/215 (57%), Positives = 158/215 (73%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
+RSGV+A+K+GMT ++ +GR++PVTVL LD QVV RT +K+GY AVQ+GAG K K
Sbjct: 2 LRSGVIAKKVGMTRLFMEDGRQVPVTVLQLDKLQVVAQRTPEKDGYTAVQLGAGSIKAKR 61
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VS+PMRG F+S V PK+K+ EFRV ++++ VG + ++ GQ VDV G +IGKGF
Sbjct: 62 VSQPMRGHFASAKVEPKRKIAEFRVAP-ENMINVGEEITADHYFAGQYVDVCGTSIGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRHNF GL THGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NL+VV
Sbjct: 121 AGAMKRHNFKGLEMTHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRVTTQNLQVV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D RGLI+VKG VPG+ K W+ ++D+ K
Sbjct: 181 KTDADRGLIMVKGAVPGS-KGGWVTIKDAVKKPFP 214
>gi|326388197|ref|ZP_08209800.1| 50S ribosomal protein L3 [Novosphingobium nitrogenifigens DSM
19370]
gi|326207363|gb|EGD58177.1| 50S ribosomal protein L3 [Novosphingobium nitrogenifigens DSM
19370]
Length = 241
Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats.
Identities = 132/219 (60%), Positives = 168/219 (76%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+GV+A+K+GMT ++ +GR +PVTVL L++CQVV RT +++GY+A+Q+GAGEAK KN
Sbjct: 1 MRTGVIAKKVGMTRLFQEDGRHVPVTVLSLEDCQVVSVRTAERDGYVALQLGAGEAKQKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP R F+ V K ++ EFRV DD +L VGS + S+F +GQLVD+TG T GKGF
Sbjct: 61 VAKPQREHFAKAEVPLKAEVAEFRV-ADDAVLEVGSTIAASHFAIGQLVDITGHTQGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKR FGG+RATHGVSISHR+HGSTG RQDPGRVFKNKKMAG MG + T +NLE+V
Sbjct: 120 AGAMKRWGFGGMRATHGVSISHRAHGSTGNRQDPGRVFKNKKMAGHMGDRQRTQQNLEIV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
DD RGLI VKG VPG+ KN W+LVRD+ K + +
Sbjct: 180 RTDDARGLIFVKGSVPGS-KNGWLLVRDAVKVNRHAEAP 217
>gi|254461019|ref|ZP_05074435.1| ribosomal protein L3 [Rhodobacterales bacterium HTCC2083]
gi|206677608|gb|EDZ42095.1| ribosomal protein L3 [Rhodobacteraceae bacterium HTCC2083]
Length = 241
Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats.
Identities = 130/215 (60%), Positives = 162/215 (75%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSG++A+K+GMT ++ +G+ IPVTVL LD QVV RT DK+GY AVQ+GAG AK K
Sbjct: 1 MRSGIIAKKVGMTRLFMEDGKAIPVTVLQLDALQVVAQRTSDKDGYTAVQLGAGTAKAKR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
S+ MRG F++ V+PK+K+ EFRV + D+L+ VG S ++ GQ VDV+G +IGKGF
Sbjct: 61 TSQAMRGHFAAAKVAPKRKVAEFRVSE-DNLINVGEEISAEHYLEGQKVDVSGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GAMKRHNFGGLRATHGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV
Sbjct: 120 QGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D RGLI++KG VPG+ K W+ V+D+ K +
Sbjct: 180 KTDADRGLIMIKGAVPGS-KGGWVTVKDAVKKKMP 213
>gi|87122971|ref|ZP_01078832.1| 50S ribosomal subunit protein L3 [Marinomonas sp. MED121]
gi|86161739|gb|EAQ63043.1| 50S ribosomal subunit protein L3 [Marinomonas sp. MED121]
Length = 212
Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats.
Identities = 95/212 (44%), Positives = 132/212 (62%), Gaps = 1/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M +V RK GMT ++N +G +PVTV+ ++ +V +T D +GY AVQV G +
Sbjct: 1 MAIQLVGRKAGMTRIFNEDGVSVPVTVIEVEPNRVTQVKTADTDGYTAVQVTVGSRRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+K G F+ V + L+EFR+ D+ + VG + + F VDV G + GKGF
Sbjct: 61 VNKAAAGHFAKAKVEAGRGLWEFRLSGDEKEINVGDELTVADFESIATVDVIGQSKGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRHNF ATHG S+SHR+ GS G Q PGRV+K KKMAG MG +VT ++LEVV
Sbjct: 121 QGAIKRHNFSMQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGHMGAAQVTTQSLEVV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R LI+VKG VPGA N ++++ + K+
Sbjct: 181 RVDLERNLIIVKGAVPGA-TNGDVILQPAVKA 211
>gi|330940885|gb|EGH43842.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. pisi str. 1704B]
Length = 211
Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats.
Identities = 100/212 (47%), Positives = 131/212 (61%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M GVV RK GMT ++ EG I VTV+ ++ +V +T + +GY AVQV GE +
Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIAVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+ G F+ NV+ + + EFR+++ D G + F GQLVDVTG + GKGF
Sbjct: 61 VTAAQAGHFAKANVAAGRTVMEFRLEEGD--YQAGDQINAEIFAAGQLVDVTGQSKGKGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR NF G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV
Sbjct: 119 QGTIKRWNFRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA + + VR + K+
Sbjct: 179 RVDAERNLLLVKGAVPGATGGNLV-VRPAAKA 209
>gi|91774635|ref|YP_544391.1| 50S ribosomal protein L3P [Methylobacillus flagellatus KT]
gi|122985649|sp|Q1H4N7|RL3_METFK RecName: Full=50S ribosomal protein L3
gi|91708622|gb|ABE48550.1| LSU ribosomal protein L3P [Methylobacillus flagellatus KT]
Length = 214
Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats.
Identities = 95/214 (44%), Positives = 129/214 (60%), Gaps = 2/214 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT ++ EG +PVTVL + +V +T +GY ++QV GE +
Sbjct: 1 MSLGLIGRKVGMTRIFTDEGESVPVTVLEVVPNRVTQIKTAASDGYTSLQVAYGERRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+ K + G ++ VS + EF V D VG + F GQLVDVTG ++GKG
Sbjct: 61 IGKALAGHYAKAGVSAGAGIKEFPVSDDVLANYSVGGQITVELFQPGQLVDVTGTSLGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
FSGA+KRHNF RA+HG S SH GS G QDPGRVF K+M G +G + TV+NLE+
Sbjct: 121 FSGAIKRHNFSSNRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMPGHLGAVKTTVQNLEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
V VD +R L+L+KG VPG+ K ++VR S K
Sbjct: 181 VRVDAERNLLLIKGAVPGS-KGGDVVVRPSVKVK 213
>gi|127511092|ref|YP_001092289.1| 50S ribosomal protein L3 [Shewanella loihica PV-4]
gi|166234593|sp|A3Q982|RL3_SHELP RecName: Full=50S ribosomal protein L3
gi|126636387|gb|ABO22030.1| LSU ribosomal protein L3P [Shewanella loihica PV-4]
Length = 212
Score = 227 bits (580), Expect = 7e-58, Method: Composition-based stats.
Identities = 91/213 (42%), Positives = 131/213 (61%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT ++ +G IPVTV+ + +V +TL+ +GY A+Q+ G K
Sbjct: 1 MAIGLIGRKVGMTRIFTEDGASIPVTVIEIAANRVAQVKTLETDGYRALQITTGTKKANR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
++KP G F+ V + L+E R+ + + + VG+ + F VDVTG + GKG
Sbjct: 61 ITKPEAGHFAKAGVEAGRGLWEMRLADGEGEGIEVGAELNVDIFADVAKVDVTGQSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KR NF ATHG S++HR++GS G Q PGRVFK KKM+G MG RVT +NL+V
Sbjct: 121 FQGGIKRWNFRTQDATHGNSLAHRANGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLDV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD +R L+LVKG VPGA I ++ + K+
Sbjct: 181 VRVDAERNLLLVKGAVPGATNGDLI-IKPAVKA 212
>gi|326793558|ref|YP_004311378.1| 50S ribosomal protein L3 [Marinomonas mediterranea MMB-1]
gi|326544322|gb|ADZ89542.1| 50S ribosomal protein L3 [Marinomonas mediterranea MMB-1]
Length = 212
Score = 227 bits (580), Expect = 7e-58, Method: Composition-based stats.
Identities = 95/212 (44%), Positives = 131/212 (61%), Gaps = 1/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M +V RK GMT ++N +G +PVTV+ ++ +V +T + +GY AVQV GE +
Sbjct: 1 MAIQLVGRKAGMTRIFNEDGVSVPVTVIEVEPNRVTQVKTAETDGYSAVQVTVGERRANR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+K G F+ NV + L+EFR+ + + VG + + F VDVTG + GKGF
Sbjct: 61 VNKAAAGHFAKANVEAGRGLWEFRLAGGEKEINVGDELTVADFESVTTVDVTGQSKGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRHNF ATHG S+SHR+ GS G Q PGRV+K KKMAG MG +VT ++LEVV
Sbjct: 121 QGGIKRHNFSMQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGHMGAAQVTTQSLEVV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R LILVKG VPGA + ++ + K+
Sbjct: 181 RVDAERNLILVKGAVPGATNGDVV-LQPAVKA 211
>gi|119383511|ref|YP_914567.1| 50S ribosomal protein L3 [Paracoccus denitrificans PD1222]
gi|166233172|sp|A1B027|RL3_PARDP RecName: Full=50S ribosomal protein L3
gi|119373278|gb|ABL68871.1| LSU ribosomal protein L3P [Paracoccus denitrificans PD1222]
Length = 245
Score = 227 bits (580), Expect = 7e-58, Method: Composition-based stats.
Identities = 121/214 (56%), Positives = 165/214 (77%), Gaps = 2/214 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
+R+GV+A+KLGMT ++ +GR++PVTVLH+DN QV+ RT +++GY+A+Q+GAGEAK K
Sbjct: 2 LRTGVIAKKLGMTRLFLEDGRQVPVTVLHVDNVQVIAQRTAEQDGYVALQLGAGEAKAKR 61
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+ +RG F+ NV+PK+K+ EFRV ++L+ VG ++ GQ VD+ G +IGKGF
Sbjct: 62 TTAALRGHFAKANVAPKRKIAEFRVSP-ENLVEVGEEIVADHYFEGQYVDIAGTSIGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRHNFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG +G RVT +NL+VV
Sbjct: 121 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHLGAVRVTTQNLQVV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
D +RGLI+VKG VPG+ K W+ ++D+ K +
Sbjct: 181 KTDAERGLIMVKGSVPGS-KGGWVTIKDAVKKPL 213
>gi|295109477|emb|CBL23430.1| 50S ribosomal protein L3, bacterial [Ruminococcus obeum A2-162]
Length = 210
Score = 227 bits (580), Expect = 7e-58, Method: Composition-based stats.
Identities = 91/212 (42%), Positives = 126/212 (59%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++A K+GMT ++N +G+ IPVTVL C V +T + +GY AVQVG GE + K
Sbjct: 1 MKKAILATKVGMTQIFNEDGQLIPVTVLQAGPCVVTQVKTEENDGYAAVQVGYGEIREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP +G F V+ ++ + EFR ++ VG F G +D T ++ GKGF
Sbjct: 61 VNKPEKGHFDKAGVAAQRFVKEFR-FENAAEYTVGQEIKADIFADGDHIDATAISKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH HG S HR GS G DP +VFK K M G MG +VTV+NLE+V
Sbjct: 120 QGAIKRHGQSRGPMAHG-SKYHRHAGSNGACSDPSKVFKGKHMPGHMGNVQVTVQNLEIV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + L+LVKG VPG KK S + ++++ KS
Sbjct: 179 RVDTENNLLLVKGAVPGPKK-SLVTIKETVKS 209
>gi|254512299|ref|ZP_05124366.1| ribosomal protein L3 [Rhodobacteraceae bacterium KLH11]
gi|221536010|gb|EEE38998.1| ribosomal protein L3 [Rhodobacteraceae bacterium KLH11]
Length = 241
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 130/215 (60%), Positives = 161/215 (74%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSG++A+K+GMT ++ +G++IPVTVLHLDN QVV RT DK+GY AVQ+GAG AK K
Sbjct: 1 MRSGIIAKKVGMTRLFMEDGKQIPVTVLHLDNLQVVAQRTADKDGYTAVQLGAGAAKAKR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SK MRG +++ V PK+KL EFRV + D L+ VG+ S +F GQ VDV+G +IGKGF
Sbjct: 61 TSKAMRGHYAAAKVEPKRKLAEFRVSE-DGLIDVGAEISAEHFLEGQKVDVSGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKR NFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV
Sbjct: 120 AGAMKRWNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D R L+ +KG VPG K+ W+ V+D+ K
Sbjct: 180 KTDADRNLVFIKGAVPGP-KSGWVTVKDAVKKKAP 213
>gi|86135762|ref|ZP_01054341.1| 50S ribosomal protein L3 [Roseobacter sp. MED193]
gi|85826636|gb|EAQ46832.1| 50S ribosomal protein L3 [Roseobacter sp. MED193]
Length = 236
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 133/215 (61%), Positives = 160/215 (74%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSG++A+K+GMT ++ +G++IPVTVLHLD QVV RT DK+GY AVQ+GAG AK K
Sbjct: 1 MRSGIIAKKVGMTRLFMEDGQQIPVTVLHLDGLQVVSQRTDDKDGYTAVQLGAGSAKAKR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SK MRG F++ V PK+KL EFRV D L+ VG+ S +F GQ VDVTG +IGKGF
Sbjct: 61 TSKAMRGHFAASKVEPKRKLVEFRV-PADALIEVGAEISAEHFLEGQKVDVTGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKR NFGGLRATHGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV
Sbjct: 120 AGAMKRWNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D RGL+ +KG VPG K+ W+ V+D+ K
Sbjct: 180 KTDADRGLVFIKGAVPGP-KSGWVTVKDAVKKKAP 213
>gi|212634829|ref|YP_002311354.1| 50S ribosomal protein L3 [Shewanella piezotolerans WP3]
gi|226730567|sp|B8CND3|RL3_SHEPW RecName: Full=50S ribosomal protein L3
gi|212556313|gb|ACJ28767.1| Ribosomal protein L3 [Shewanella piezotolerans WP3]
Length = 212
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 93/213 (43%), Positives = 131/213 (61%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT ++N +G +PVTV+ + +V +TLD +GY A+QV G K
Sbjct: 1 MAIGLIGRKVGMTRIFNEDGASVPVTVIEIAANRVTQVKTLDTDGYRALQVTTGTKKANR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
++KP G F+ V + L+E R+ D + + VG+ + F VDVTG + GKG
Sbjct: 61 ITKPEAGHFAKAGVEAGRGLWELRLADGDGEGIEVGAELNVDIFADIAKVDVTGQSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KR NF THG S++HRS+GS G Q PGRVFK KKM+G MG RVT +NL++
Sbjct: 121 FQGGIKRWNFHAQDMTHGNSLAHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLDI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD +R L+LVKG VPGA I ++ + K+
Sbjct: 181 VRVDAERNLLLVKGAVPGATNGDLI-IKPAVKA 212
>gi|253580619|ref|ZP_04857883.1| 50S ribosomal protein L3 [Ruminococcus sp. 5_1_39B_FAA]
gi|251847990|gb|EES75956.1| 50S ribosomal protein L3 [Ruminococcus sp. 5_1_39BFAA]
Length = 210
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 90/212 (42%), Positives = 123/212 (58%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++A K+GMT ++N +G+ IPVTVL C V +T + +GY AVQVG G+ +
Sbjct: 1 MKKAILATKVGMTQIFNEDGQLIPVTVLQAGPCVVTQVKTEENDGYEAVQVGFGDIRESL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP +G F V+ K+ + EFR VG F G +D T ++ GKGF
Sbjct: 61 VNKPEKGHFDKAGVAVKRFVKEFRFDN-AAEYTVGQEIKADIFADGDHIDATAVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH HG S HR GS G DP +VFK K M G MG +VTV+NLE+V
Sbjct: 120 QGAIKRHGQSRGPMAHG-SKYHRHAGSNGACSDPSKVFKGKHMPGHMGNVQVTVQNLEIV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + L+LVKG VPG KK S + ++++ KS
Sbjct: 179 RVDTENNLLLVKGAVPGPKK-SLVTIKETVKS 209
>gi|56461024|ref|YP_156305.1| ribosomal protein L3 [Idiomarina loihiensis L2TR]
gi|81821713|sp|Q5QXZ0|RL3_IDILO RecName: Full=50S ribosomal protein L3
gi|56180034|gb|AAV82756.1| Ribosomal protein L3 [Idiomarina loihiensis L2TR]
Length = 212
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 95/213 (44%), Positives = 135/213 (63%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT V+ +G +PVTV+ + +V ++ D +GY A+QV GE K
Sbjct: 1 MAIGLVGRKVGMTRVFQEDGASVPVTVIEVLANRVTQVKSDDTDGYRALQVTTGEKKASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP+ G F+ + L+EFR+Q + + VGS + F VDVTG + GKG
Sbjct: 61 VTKPLAGHFAKAGTEAGRGLWEFRLQNGEGEDYAVGSELTVDIFAEVNKVDVTGTSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G +KR NF ATHG S+SHR+ GS G Q PG+VFK KKMAG+MG +VT ++LE+
Sbjct: 121 FAGTVKRWNFSMQDATHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGQMGNEQVTTQSLEL 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD +R L+L+KG VPGA S ++V+ + K+
Sbjct: 181 VRVDAERSLLLIKGAVPGA-TGSDVIVKPAVKA 212
>gi|289209329|ref|YP_003461395.1| 50S ribosomal protein L3 [Thioalkalivibrio sp. K90mix]
gi|288944960|gb|ADC72659.1| 50S ribosomal protein L3 [Thioalkalivibrio sp. K90mix]
Length = 214
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 102/214 (47%), Positives = 142/214 (66%), Gaps = 2/214 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RKLGM+ V+ +G +PVTVL +DN +VV + + +GY AVQV AG K
Sbjct: 1 MAIGLIGRKLGMSRVFTDDGVSVPVTVLQVDNNRVVQIKRSEGDGYNAVQVTAGARKASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
VSKP G +++ +V P + L+EFRV+ D+ + L G + F GQ+VDVT + GKG
Sbjct: 61 VSKPEAGHYAAASVEPGRGLWEFRVEADELEGLAPGDAITVDRFEEGQVVDVTSQSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F GA+KRHNF ATHG S++HR+ GS G Q PGRVFK KKMAG MG R T++NL+V
Sbjct: 121 FQGAVKRHNFRTQDATHGNSLAHRAPGSIGQNQSPGRVFKGKKMAGHMGAERKTIQNLKV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
V VD R L+L++G VPGA ++ +++R + K+
Sbjct: 181 VRVDADRSLVLIQGAVPGAP-STDVMIRPAVKAK 213
>gi|312115687|ref|YP_004013283.1| 50S ribosomal protein L3 [Rhodomicrobium vannielii ATCC 17100]
gi|311220816|gb|ADP72184.1| 50S ribosomal protein L3 [Rhodomicrobium vannielii ATCC 17100]
Length = 236
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 126/220 (57%), Positives = 162/220 (73%), Gaps = 2/220 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSG++A+K+GMT ++ G +PVTVL LD CQV+ HRT + NGY A+QVGAG KVKN
Sbjct: 1 MRSGLLAQKVGMTRIFTEAGEHVPVTVLKLDQCQVIAHRTQEANGYTAIQVGAGSRKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V++ RG F+ V PK K+ EFRV ++++ VG+ + +F GQ VDV G +IGKGF
Sbjct: 61 VTRAERGHFAKAQVEPKAKVVEFRVTP-ENVIEVGAELTADHFLAGQFVDVIGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKR NFGGLRATHGVSISHRSHGSTG RQDPG+ FK KKMAG MG +RVT +NL+VV
Sbjct: 120 AGAMKRWNFGGLRATHGVSISHRSHGSTGNRQDPGKTFKGKKMAGHMGVDRVTTQNLQVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
D +RGL+L++G VPGA K W++V+D+ K + V
Sbjct: 180 RTDVERGLLLIRGAVPGA-KGGWVMVKDAVKKPLPKDVPV 218
>gi|292492421|ref|YP_003527860.1| ribosomal protein L3 [Nitrosococcus halophilus Nc4]
gi|291581016|gb|ADE15473.1| ribosomal protein L3 [Nitrosococcus halophilus Nc4]
Length = 216
Score = 227 bits (579), Expect = 9e-58, Method: Composition-based stats.
Identities = 101/215 (46%), Positives = 140/215 (65%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RKLGMT V+ EG IPVTV+ ++ +TL+++ Y A+QV GE +
Sbjct: 1 MAIGLVGRKLGMTRVFTDEGESIPVTVIEATPNRISQIKTLERDSYRALQVTLGEKRPSR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP++G F+ V P +KL EFR+ + + GS F GQ VDVTG T G+G
Sbjct: 61 VTKPLKGHFAKAGVEPGRKLHEFRLAEGEGADAEAGSELKVGLFEAGQKVDVTGTTRGRG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G ++R+ FGG A+HG S+SHR+ GS G Q PGRVFK KKMAG+MG + TV+NLE+
Sbjct: 121 FAGVVRRYRFGGGDASHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGQMGNVQRTVQNLEL 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V VD++R L+LVKG +PGA + V+ + K+AV
Sbjct: 181 VRVDEERHLLLVKGAIPGAPGGDVV-VKPAAKAAV 214
>gi|85703987|ref|ZP_01035090.1| 50S ribosomal protein L3 [Roseovarius sp. 217]
gi|85671307|gb|EAQ26165.1| 50S ribosomal protein L3 [Roseovarius sp. 217]
Length = 280
Score = 227 bits (579), Expect = 9e-58, Method: Composition-based stats.
Identities = 119/215 (55%), Positives = 161/215 (74%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
+RSGV+A+K+GMT ++ +G+++PVTVL LD QVV RT +K+GY AVQ+GAG AK K
Sbjct: 2 LRSGVIAKKVGMTRLFLEDGKQVPVTVLQLDKLQVVAQRTPEKDGYTAVQLGAGTAKAKR 61
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++ MRG F++ V PK+K+ EFRV ++++ VG + ++ GQ VDV+G +IGKGF
Sbjct: 62 TTQAMRGHFAAAKVEPKRKIAEFRVAP-ENMINVGEEITADHYFEGQFVDVSGTSIGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRHNFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG +VT +NL+V+
Sbjct: 121 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAAKVTTQNLQVI 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D RGLI++KG VPG+ K W+ ++D+ K
Sbjct: 181 KTDADRGLIMIKGAVPGS-KGGWVTIKDAVKKPFP 214
>gi|288957422|ref|YP_003447763.1| large subunit ribosomal protein L3 [Azospirillum sp. B510]
gi|288909730|dbj|BAI71219.1| large subunit ribosomal protein L3 [Azospirillum sp. B510]
Length = 236
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 134/215 (62%), Positives = 168/215 (78%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSG++A+K+GMT V+ +G+ +PVTVL +D+CQVV RT +K+GY AVQ+GAG KVKN
Sbjct: 1 MRSGLIAQKVGMTRVFTDDGQHVPVTVLKVDSCQVVAVRTEEKDGYTAVQLGAGAIKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP RG F+ V PK+KL EFRV D L+ VG+ S ++F GQ VDVTG +IGKGF
Sbjct: 61 VNKPERGHFAKARVEPKRKLVEFRVDA-DALIEVGAELSVTHFVAGQYVDVTGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPG+VFKNKKMAG +G RVTV NL+VV
Sbjct: 120 AGAMKRWNFGGLRATHGVSVSHRSHGSTGNRQDPGKVFKNKKMAGHLGDERVTVLNLQVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
+VD+ RGLI++KG VPGA+ W+ +RD+ K
Sbjct: 180 AVDEARGLIMLKGAVPGAE-GGWLRIRDAVKKKAP 213
>gi|260752974|ref|YP_003225867.1| 50S ribosomal protein L3 [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|258552337|gb|ACV75283.1| ribosomal protein L3 [Zymomonas mobilis subsp. mobilis NCIMB 11163]
Length = 242
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 126/219 (57%), Positives = 164/219 (74%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+GV+A+K+GMT ++ +GR +PVTVL L++ QVV + D++GY+AVQ+GAG AK KN
Sbjct: 1 MRTGVIAKKVGMTRLFQEDGRHVPVTVLKLEDVQVVAVKNKDQDGYVAVQLGAGSAKAKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP+RG F+ V K KL EF V + D +L VG+ S +F GQLVD++G T GKGF
Sbjct: 61 VTKPVRGHFAKAEVELKAKLVEFPVSE-DAVLEVGTSISADHFIAGQLVDISGQTQGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKR FGGLRATHGVS+SHRSHGSTG RQDPGRVFKNKKMAG MG + T +NLEV+
Sbjct: 120 AGAMKRWGFGGLRATHGVSLSHRSHGSTGNRQDPGRVFKNKKMAGHMGARQRTQQNLEVI 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
S D +R LI V+G VPG+ K +W+++RD+ K A +
Sbjct: 180 STDAERDLIFVRGSVPGS-KGAWLIIRDAVKVARPTEAP 217
>gi|126724861|ref|ZP_01740704.1| 50S ribosomal protein L3 [Rhodobacterales bacterium HTCC2150]
gi|126706025|gb|EBA05115.1| 50S ribosomal protein L3 [Rhodobacterales bacterium HTCC2150]
Length = 244
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 126/220 (57%), Positives = 165/220 (75%), Gaps = 2/220 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT ++ +GR++PVTVL LDN QVV RT +++GY AVQ+G G AK K
Sbjct: 1 MRSGVIAKKVGMTRLFMEDGRQVPVTVLQLDNLQVVSQRTAERDGYTAVQLGTGLAKAKR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
S+ MRG F++ V PK+K+ EFRV ++++ VG + ++ GQ+VDV+G +IGKGF
Sbjct: 61 TSQAMRGHFAAAKVEPKRKVAEFRVAP-ENMINVGEEITADHYFEGQIVDVSGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRHNFGGLRATHGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NL+VV
Sbjct: 120 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLQVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
S D RGLI++KG VPG+ K W+ ++D+ K K+
Sbjct: 180 STDTDRGLIMIKGAVPGS-KGGWVTIKDAAKKPTPENVKL 218
>gi|110634030|ref|YP_674238.1| 50S ribosomal protein L3 [Mesorhizobium sp. BNC1]
gi|122965958|sp|Q11HQ2|RL3_MESSB RecName: Full=50S ribosomal protein L3
gi|110285014|gb|ABG63073.1| LSU ribosomal protein L3P [Chelativorans sp. BNC1]
Length = 242
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 137/220 (62%), Positives = 168/220 (76%), Gaps = 2/220 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT VYN G IPVTVL ++NCQVV RT +KNGY AVQ+G G AKVKN
Sbjct: 1 MRSGVIAQKIGMTRVYNETGEHIPVTVLRMENCQVVAQRTEEKNGYTAVQLGVGLAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SK +RG F++ +V PK K+ EFRV ++LL VG+ + +F GQ VDVTG +IGKGF
Sbjct: 61 TSKALRGHFAAASVEPKAKVAEFRVSP-ENLLDVGAEITADHFVPGQKVDVTGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G MKRHNFGG RATHG S+SHR+HGSTG RQDPG+VFK KKMAG MG RVT +NLEVV
Sbjct: 120 QGVMKRHNFGGGRATHGNSVSHRTHGSTGQRQDPGKVFKGKKMAGHMGDRRVTTQNLEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
S D +RGLILV+G VPG+ K SWI+VRD+ K+ + + +
Sbjct: 180 STDTERGLILVRGAVPGS-KGSWIMVRDAVKAPLPKEAPL 218
>gi|126739691|ref|ZP_01755383.1| 50S ribosomal protein L3 [Roseobacter sp. SK209-2-6]
gi|126719337|gb|EBA16047.1| 50S ribosomal protein L3 [Roseobacter sp. SK209-2-6]
Length = 234
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 135/215 (62%), Positives = 164/215 (76%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSG++A+K+GMT ++ +G++IPVTVLHLD QVV RT DK+GY AVQ+GAG AKVK
Sbjct: 1 MRSGIIAKKVGMTRLFMEDGQQIPVTVLHLDGLQVVSQRTEDKDGYTAVQLGAGSAKVKR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VSK MRG F++ V PK+KL EFRV D L+ VG+ S +F GQ VDVTG +IGKGF
Sbjct: 61 VSKAMRGHFAASKVEPKRKLVEFRV-PADALIEVGAEISAEHFLEGQKVDVTGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRHNFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV
Sbjct: 120 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D +RGL+ +KG VPG K+ W+ V+D+ K
Sbjct: 180 KTDAERGLVFIKGAVPGP-KSGWVTVKDAVKKKAP 213
>gi|223041817|ref|ZP_03612007.1| 50S ribosomal protein L3 [Actinobacillus minor 202]
gi|240947884|ref|ZP_04752324.1| 50S ribosomal protein L3 [Actinobacillus minor NM305]
gi|223017386|gb|EEF15807.1| 50S ribosomal protein L3 [Actinobacillus minor 202]
gi|240297846|gb|EER48282.1| 50S ribosomal protein L3 [Actinobacillus minor NM305]
Length = 210
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 98/211 (46%), Positives = 132/211 (62%), Gaps = 1/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT V+ +G IPVTV+ ++ +V +TL+ +GY A+QV G K V
Sbjct: 1 MIGLIGRKVGMTRVFTEDGVSIPVTVIEIEANRVTQVKTLENDGYSAIQVTTGTKKASRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F V + L+EFR + + +G + FT + VDVTG + GKGF
Sbjct: 61 TKPEAGHFVKAGVEAGRGLWEFRTEGETQEFTLGQEINVDIFTDVKKVDVTGTSKGKGFQ 120
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV
Sbjct: 121 GGVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVR 180
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA NS ++V+ + K+
Sbjct: 181 VDAERKLLLVKGAVPGA-TNSDVIVKPAVKA 210
>gi|161485649|ref|NP_420061.2| 50S ribosomal protein L3 [Caulobacter crescentus CB15]
gi|42559686|sp|Q9A8V3|RL3_CAUCR RecName: Full=50S ribosomal protein L3
Length = 255
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 121/218 (55%), Positives = 156/218 (71%), Gaps = 2/218 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+GV+A+KLGMT ++ G+ +PVTVL LD CQV RT++K+GY A+Q+GAG K KN
Sbjct: 7 RTGVIAKKLGMTRFFDEAGQHVPVTVLSLDGCQVTGVRTVEKDGYTALQLGAGAKKAKNT 66
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
S MRG F+ V PK+ + EFRV +++ L+ VG+ + +F GQ VD+ G+T+GKGF+
Sbjct: 67 SNAMRGHFAKAAVEPKRVVAEFRV-EENALIEVGAELTADHFVAGQKVDIQGVTVGKGFA 125
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPGR F KKMAG +G VT N+ V
Sbjct: 126 GAMKRWNFGGLRATHGVSVSHRSHGSTGNRQDPGRTFPGKKMAGHLGQETVTTLNVTVWK 185
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
VD +RGLILVKG VPG + S++ VRD+ K A+
Sbjct: 186 VDVERGLILVKGAVPG-HEGSYVKVRDAVKKALPADAP 222
>gi|221234243|ref|YP_002516679.1| 50S ribosomal protein L3 [Caulobacter crescentus NA1000]
gi|13422579|gb|AAK23229.1| ribosomal protein L3 [Caulobacter crescentus CB15]
gi|220963415|gb|ACL94771.1| LSU ribosomal protein L3P [Caulobacter crescentus NA1000]
Length = 267
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 121/218 (55%), Positives = 156/218 (71%), Gaps = 2/218 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+GV+A+KLGMT ++ G+ +PVTVL LD CQV RT++K+GY A+Q+GAG K KN
Sbjct: 19 RTGVIAKKLGMTRFFDEAGQHVPVTVLSLDGCQVTGVRTVEKDGYTALQLGAGAKKAKNT 78
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
S MRG F+ V PK+ + EFRV +++ L+ VG+ + +F GQ VD+ G+T+GKGF+
Sbjct: 79 SNAMRGHFAKAAVEPKRVVAEFRV-EENALIEVGAELTADHFVAGQKVDIQGVTVGKGFA 137
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPGR F KKMAG +G VT N+ V
Sbjct: 138 GAMKRWNFGGLRATHGVSVSHRSHGSTGNRQDPGRTFPGKKMAGHLGQETVTTLNVTVWK 197
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
VD +RGLILVKG VPG + S++ VRD+ K A+
Sbjct: 198 VDVERGLILVKGAVPG-HEGSYVKVRDAVKKALPADAP 234
>gi|83854978|ref|ZP_00948508.1| 50S ribosomal protein L3 [Sulfitobacter sp. NAS-14.1]
gi|83842821|gb|EAP81988.1| 50S ribosomal protein L3 [Sulfitobacter sp. NAS-14.1]
Length = 280
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 128/216 (59%), Positives = 158/216 (73%), Gaps = 2/216 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
+RSGV+A+K+GMT ++ +G++IPVTVL LD QVV RT +K+GY AVQ+GAG AK K
Sbjct: 2 LRSGVIAKKMGMTRLFMEDGKQIPVTVLQLDKLQVVAQRTPEKDGYTAVQLGAGTAKAKR 61
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
S+ MRG F++ V PK+K+ EFRV + +L VG ++ GQ VDV G +IGKGF
Sbjct: 62 TSQAMRGHFAAAKVEPKRKVAEFRVDP-EAMLNVGEEIIADHYFAGQYVDVAGTSIGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRHNFGGLRATHGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV
Sbjct: 121 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
D RGLI+VKG VPG+ K W+ V+D+ K
Sbjct: 181 KTDSARGLIMVKGAVPGS-KGGWVTVKDAVKKPFPA 215
>gi|83941500|ref|ZP_00953962.1| 50S ribosomal protein L3 [Sulfitobacter sp. EE-36]
gi|83847320|gb|EAP85195.1| 50S ribosomal protein L3 [Sulfitobacter sp. EE-36]
Length = 280
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 128/216 (59%), Positives = 158/216 (73%), Gaps = 2/216 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
+RSGV+A+K+GMT ++ +G++IPVTVL LD QVV RT +K+GY AVQ+GAG AK K
Sbjct: 2 LRSGVIAKKMGMTRLFMEDGKQIPVTVLQLDKLQVVAQRTPEKDGYTAVQLGAGTAKAKR 61
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
S+ MRG F++ V PK+K+ EFRV + +L VG ++ GQ VDV G +IGKGF
Sbjct: 62 TSQAMRGHFAAAKVEPKRKVAEFRVDP-EAMLNVGEEIIADHYFAGQYVDVAGTSIGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRHNFGGLRATHGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV
Sbjct: 121 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
D RGLI+VKG VPG+ K W+ V+D+ K
Sbjct: 181 KTDSARGLIMVKGAVPGS-KGGWVTVKDAVKKPFPA 215
>gi|225024790|ref|ZP_03713982.1| hypothetical protein EIKCOROL_01677 [Eikenella corrodens ATCC
23834]
gi|224942497|gb|EEG23706.1| hypothetical protein EIKCOROL_01677 [Eikenella corrodens ATCC
23834]
Length = 214
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 100/212 (47%), Positives = 129/212 (60%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT V+ +G +PVTVL + +V ++ D +GY AVQV G+ K
Sbjct: 1 MTLGLVGRKVGMTRVFTEQGVSVPVTVLEMSPNRVTQVKSKDTDGYAAVQVTFGQKKANR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+K G F+ V + L EF + ++ L VG + + F GQ VDVTG + GKG
Sbjct: 61 VNKAEAGHFAKAGVEAGRGLHEFALTEEKLAELKVGDEVTVAIFEAGQFVDVTGTSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G +KRHNFG RA+HG S SHR GS G QDPGRVF K+MAG+ G TV+ LEV
Sbjct: 121 FAGTIKRHNFGAQRASHGNSRSHRVPGSIGMNQDPGRVFPGKRMAGQYGNTTATVQRLEV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
V VD +R L+LVKG VPGA + VR S K
Sbjct: 181 VRVDAERNLLLVKGAVPGAANGDVV-VRPSVK 211
>gi|254438817|ref|ZP_05052311.1| ribosomal protein L3 [Octadecabacter antarcticus 307]
gi|198254263|gb|EDY78577.1| ribosomal protein L3 [Octadecabacter antarcticus 307]
Length = 278
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 126/215 (58%), Positives = 162/215 (75%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
+RSG++A+K+GMT ++ +GR+IPVTVL LD QVV RT +K+GY AVQ+GAG AK K
Sbjct: 4 LRSGIIAKKVGMTRLFQEDGRQIPVTVLQLDKLQVVAQRTAEKDGYTAVQLGAGTAKAKR 63
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
S PMRG F++ V PK+K+ EFRV + ++L+PVG S++ GQ VDV+G +IGKGF
Sbjct: 64 TSAPMRGHFAAAKVEPKRKVCEFRVSE-ENLIPVGEEIIASHYFEGQFVDVSGTSIGKGF 122
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRHNF GLRATHGVSISHRSHGSTG QDPG+VFK KKMAG MG ++T +NL V+
Sbjct: 123 AGAMKRHNFSGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAAKITTQNLVVI 182
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D RGLI+VKG VPG+ K W+ V+D+ K +
Sbjct: 183 KTDPDRGLIMVKGAVPGS-KGGWVTVKDAVKKPAS 216
>gi|295688906|ref|YP_003592599.1| 50S ribosomal protein L3 [Caulobacter segnis ATCC 21756]
gi|295430809|gb|ADG09981.1| 50S ribosomal protein L3 [Caulobacter segnis ATCC 21756]
Length = 254
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 121/218 (55%), Positives = 157/218 (72%), Gaps = 2/218 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+GV+A+KLGMT ++ G+ +PVTVL LD CQV RT++K+GY A+Q+GAG K KN
Sbjct: 7 RTGVLAKKLGMTRFFDEAGQHVPVTVLSLDGCQVTGVRTVEKDGYTALQLGAGAKKAKNT 66
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SK +RG F+ V PK+ + EFRV +++ L+ VG+ + +F GQ VD+ G+T+GKGF+
Sbjct: 67 SKALRGHFAKAAVEPKRVVAEFRV-EENALIEVGAELTADHFVAGQKVDIQGVTVGKGFA 125
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPGR F KKMAG +G VT N+ V
Sbjct: 126 GAMKRWNFGGLRATHGVSVSHRSHGSTGNRQDPGRTFPGKKMAGHLGQETVTTLNVTVWK 185
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
VD +RGLILVKG VPG + S++ VRD+ K A+
Sbjct: 186 VDVERGLILVKGAVPG-HEGSYVKVRDAVKKALPADAP 222
>gi|309782834|ref|ZP_07677554.1| 50S ribosomal protein L3 [Ralstonia sp. 5_7_47FAA]
gi|308918258|gb|EFP63935.1| 50S ribosomal protein L3 [Ralstonia sp. 5_7_47FAA]
Length = 221
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 92/216 (42%), Positives = 128/216 (59%), Gaps = 2/216 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ +G IPVTVL + + +V +T + +GY AVQV G +
Sbjct: 5 MSLGLVGRKVGMTRIFTDDGDSIPVTVLEVGDNRVTQIKTDETDGYTAVQVTFGTRRASR 64
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP+ G + V + + EFRV G+ S F VGQ +DV G+TIGKG
Sbjct: 65 VTKPLAGHLAKAGVEAGEVIKEFRVDAARAAEFQPGANISVDLFEVGQKIDVQGVTIGKG 124
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KR+NF RA+HG S SH GS G QDPGRVF K+M G MG TV+NLE+
Sbjct: 125 YAGTIKRYNFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTRTVQNLEI 184
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
+D +R L+LVKG +PGA K ++V + K+
Sbjct: 185 AKIDAERKLLLVKGAIPGA-KGGQVIVTPAVKARAK 219
>gi|300721365|ref|YP_003710636.1| 50S ribosomal subunit protein L3 [Xenorhabdus nematophila ATCC
19061]
gi|297627853|emb|CBJ88399.1| 50S ribosomal subunit protein L3 [Xenorhabdus nematophila ATCC
19061]
Length = 210
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 95/211 (45%), Positives = 132/211 (62%), Gaps = 1/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++N +V + + +GY A+QV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEIENNRVTQVKNDETDGYRAIQVTTGSKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+K G F+ V + L EFR+ + D VG S F + VDVTG + GKGF+
Sbjct: 61 NKSEAGHFAKAGVEAGRILREFRLSEGDAEFTVGQSISVEIFADVKKVDVTGTSKGKGFA 120
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV
Sbjct: 121 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVR 180
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA NS ++V+ + K+
Sbjct: 181 VDAERNLLLVKGAVPGA-TNSNLIVKPAVKA 210
>gi|290477192|ref|YP_003470107.1| 50S ribosomal subunit protein L3 [Xenorhabdus bovienii SS-2004]
gi|289176540|emb|CBJ83349.1| 50S ribosomal subunit protein L3 [Xenorhabdus bovienii SS-2004]
Length = 210
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 94/211 (44%), Positives = 132/211 (62%), Gaps = 1/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPV+V+ ++ ++ + + +GY A+QV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVSVIEIEENRITQVKDQESDGYRAIQVTTGSKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L EFR+ DD+ VG S F + VDVTG + GKGF+
Sbjct: 61 NKPEAGHFAKAGVEAGRTLREFRLSLDDEEYTVGQSISVEIFANVKKVDVTGTSKGKGFA 120
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV
Sbjct: 121 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVR 180
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA S ++V+ + K+
Sbjct: 181 VDAERNLLLVKGAVPGA-TGSDLIVKPAVKA 210
>gi|300114736|ref|YP_003761311.1| 50S ribosomal protein L3 [Nitrosococcus watsonii C-113]
gi|299540673|gb|ADJ28990.1| 50S ribosomal protein L3 [Nitrosococcus watsonii C-113]
Length = 213
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 100/213 (46%), Positives = 143/213 (67%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ EG IPVTV+ ++ +TL+++GY A QV GE +
Sbjct: 1 MAIGLIGRKIGMTRVFTDEGASIPVTVIEATPNRISQVKTLERDGYQAAQVTVGERRPAR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQ-KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP++G F+ V P +KL EFR + + + + VG S F VGQ VDV G+T G+G
Sbjct: 61 VTKPLKGHFAKAKVEPGRKLREFRFEIQKEKNIEVGDELKVSLFEVGQRVDVIGVTRGRG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G ++R++FGG A+HG S+SHR+ GS G Q PGRVFK KKMAG+MG R TV+NLE+
Sbjct: 121 FAGVVRRYHFGGGDASHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGQMGNVRRTVQNLEL 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD++R L+L+KG +PGA ++V+ + KS
Sbjct: 181 VRVDEERQLLLIKGAIPGAP-GGDVIVKPAVKS 212
>gi|187930364|ref|YP_001900851.1| 50S ribosomal protein L3 [Ralstonia pickettii 12J]
gi|241664532|ref|YP_002982892.1| 50S ribosomal protein L3 [Ralstonia pickettii 12D]
gi|226730553|sp|B2UEL9|RL3_RALPJ RecName: Full=50S ribosomal protein L3
gi|187727254|gb|ACD28419.1| ribosomal protein L3 [Ralstonia pickettii 12J]
gi|240866559|gb|ACS64220.1| ribosomal protein L3 [Ralstonia pickettii 12D]
Length = 217
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 92/216 (42%), Positives = 128/216 (59%), Gaps = 2/216 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ +G IPVTVL + + +V +T + +GY AVQV G +
Sbjct: 1 MSLGLVGRKVGMTRIFTDDGDSIPVTVLEVGDNRVTQIKTDETDGYTAVQVTFGTRRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP+ G + V + + EFRV G+ S F VGQ +DV G+TIGKG
Sbjct: 61 VTKPLAGHLAKAGVEAGEVIKEFRVDAARAAEFQPGANISVDLFEVGQKIDVQGVTIGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KR+NF RA+HG S SH GS G QDPGRVF K+M G MG TV+NLE+
Sbjct: 121 YAGTIKRYNFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTRTVQNLEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
+D +R L+LVKG +PGA K ++V + K+
Sbjct: 181 AKIDAERKLLLVKGAIPGA-KGGQVIVTPAVKARAK 215
>gi|157377449|ref|YP_001476049.1| 50S ribosomal protein L3 [Shewanella sediminis HAW-EB3]
gi|189029482|sp|A8G1E8|RL3_SHESH RecName: Full=50S ribosomal protein L3
gi|157319823|gb|ABV38921.1| ribosomal protein L3 [Shewanella sediminis HAW-EB3]
Length = 212
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 92/213 (43%), Positives = 132/213 (61%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT ++ +G IPVTV+ + + +V +TL+ +GY A+QV G K
Sbjct: 1 MAIGLIGRKVGMTRIFAEDGVSIPVTVIEIASNRVTQVKTLETDGYRALQVTTGTKKANR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
++KP G F+ V + L+E R+ + + + VG+ + F VDVTG + GKG
Sbjct: 61 ITKPEAGHFAKAGVEAGRGLWEVRLADGEGESIEVGAELNVDIFADVAKVDVTGQSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KR NF THG S++HRS+GS G Q PGRVFK KKM+G MG RVT +NL+V
Sbjct: 121 FQGGIKRWNFHAQDMTHGNSLAHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLDV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD +R L+LVKG VPGA + I ++ + K+
Sbjct: 181 VRVDAERNLLLVKGAVPGATNGNLI-IKPAVKA 212
>gi|317049840|ref|YP_004117488.1| 50S ribosomal protein L3 [Pantoea sp. At-9b]
gi|316951457|gb|ADU70932.1| 50S ribosomal protein L3 [Pantoea sp. At-9b]
Length = 208
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 97/211 (45%), Positives = 135/211 (63%), Gaps = 3/211 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG+V +K+GMT ++ +G IPVTV+ ++ +V +TL+ +GY A+QV G K V
Sbjct: 1 MSGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKTLENDGYQAIQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR + ++ VG S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRTEGEE--YSVGQNISVEIFAEVKKVDVTGTSKGKGFA 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++LEVV
Sbjct: 119 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLEVVR 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA S ++V+ + K+
Sbjct: 179 VDAERNLLLVKGAVPGA-TGSDLIVKPAVKA 208
>gi|197287068|ref|YP_002152940.1| 50S ribosomal protein L3 [Proteus mirabilis HI4320]
gi|227354934|ref|ZP_03839348.1| 50S ribosomal protein L3 [Proteus mirabilis ATCC 29906]
gi|226730550|sp|B4F1I4|RL3_PROMH RecName: Full=50S ribosomal protein L3
gi|194684555|emb|CAR46379.1| 50S ribosomal protein L3 [Proteus mirabilis HI4320]
gi|227165016|gb|EEI49855.1| 50S ribosomal protein L3 [Proteus mirabilis ATCC 29906]
Length = 209
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 97/211 (45%), Positives = 134/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++N +V + L+K+GY A+QV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEIENNRVTQVKDLEKDGYRAIQVTTGSKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
KP G F+ V + L EFR+ + ++ VG S F + VDVTG + GKGF+
Sbjct: 61 LKPEAGHFAKAGVEAGRLLREFRLNEGEE-YTVGQSISVEIFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG++G +VTV++LEVV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGRVFKGKKMAGQLGNEQVTVQSLEVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA S ++V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209
>gi|56551413|ref|YP_162252.1| 50S ribosomal protein L3 [Zymomonas mobilis subsp. mobilis ZM4]
gi|241761060|ref|ZP_04759149.1| ribosomal protein L3 [Zymomonas mobilis subsp. mobilis ATCC 10988]
gi|81820917|sp|Q5NQ64|RL3_ZYMMO RecName: Full=50S ribosomal protein L3
gi|56542987|gb|AAV89141.1| ribosomal protein L3 [Zymomonas mobilis subsp. mobilis ZM4]
gi|241374679|gb|EER64140.1| ribosomal protein L3 [Zymomonas mobilis subsp. mobilis ATCC 10988]
Length = 242
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 126/219 (57%), Positives = 163/219 (74%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+GV+A+K+GMT ++ +GR +PVTVL L++ QVV + D++GY+AVQ+GAG AK KN
Sbjct: 1 MRTGVIAKKVGMTRLFQEDGRHVPVTVLKLEDVQVVAVKNKDQDGYVAVQLGAGSAKAKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP+RG F+ V K KL EF V + D +L VG+ S +F GQLVD++G T GKGF
Sbjct: 61 VTKPVRGHFAKAEVELKAKLVEFPVSE-DAVLEVGTSISADHFIAGQLVDISGQTQGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKR FGGLRATHGVS+SHRSHGSTG RQDPGRVFKNKKMAG MG + T +NLEV+
Sbjct: 120 AGAMKRWGFGGLRATHGVSLSHRSHGSTGNRQDPGRVFKNKKMAGHMGARQRTQQNLEVI 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
S D +R LI V+G VPG+ K +W+++RD+ K A
Sbjct: 180 STDAERDLIFVRGSVPGS-KGAWLIIRDAVKVARPTDAP 217
>gi|110833258|ref|YP_692117.1| 50S ribosomal protein L3 [Alcanivorax borkumensis SK2]
gi|123149718|sp|Q0VSK3|RL3_ALCBS RecName: Full=50S ribosomal protein L3
gi|110646369|emb|CAL15845.1| 50S ribosomal protein L3 [Alcanivorax borkumensis SK2]
Length = 211
Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 98/213 (46%), Positives = 131/213 (61%), Gaps = 3/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M GV+ RK GMT V+ EG +PVTV+ + +V +T + +GY AVQV GE +
Sbjct: 1 MAIGVIGRKCGMTRVFTEEGVSVPVTVIEVGPNRVSQVKTEESDGYQAVQVTVGERRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+K G F+ V + ++EFR + + GS + F GQ++DVTG + GKGF
Sbjct: 61 VTKAQAGHFAKAGVEAGRGVWEFRAEAGE--FEAGSSVTVEGFEAGQMIDVTGTSKGKGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR NF ATHG S+SHR+ GS G Q PGRVFK KKMAG +G RVTV+NLEVV
Sbjct: 119 AGGVKRWNFSTQDATHGNSLSHRAPGSIGQNQTPGRVFKGKKMAGHLGAERVTVQNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD + L+LVKG VPGA ++VR + K+
Sbjct: 179 RVDADKNLLLVKGAVPGA-TGGDVIVRLAVKAK 210
>gi|34499641|ref|NP_903856.1| 50S ribosomal protein L3 [Chromobacterium violaceum ATCC 12472]
gi|42559595|sp|Q7NQF2|RL3_CHRVO RecName: Full=50S ribosomal protein L3
gi|34105491|gb|AAQ61846.1| 50S ribosomal protein L3 [Chromobacterium violaceum ATCC 12472]
Length = 214
Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 103/213 (48%), Positives = 131/213 (61%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ +G IPVTVL + + +V +T + +GY AVQV G K
Sbjct: 1 MSLGLVGRKVGMTRIFAEDGATIPVTVLDMSSNRVTQIKTAETDGYNAVQVTYGSKKASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+K G F+ V L EF + D G + FTVGQLVDVTG + GKG
Sbjct: 61 VNKADAGHFAKAGVEAGLGLAEFALSADALSNFKPGDAIAVEIFTVGQLVDVTGTSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
FSG +KRHNF RA+HG S SH + GS G QDPGRVF K+MAG+ G + TV+ LE+
Sbjct: 121 FSGVIKRHNFSSNRASHGNSRSHNTPGSIGQAQDPGRVFPGKRMAGQYGNVKSTVQCLEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD +R LILVKG VPGA KN ++VR S K+
Sbjct: 181 VRVDAERQLILVKGAVPGA-KNGDVVVRPSVKA 212
>gi|153812865|ref|ZP_01965533.1| hypothetical protein RUMOBE_03272 [Ruminococcus obeum ATCC 29174]
gi|149831077|gb|EDM86166.1| hypothetical protein RUMOBE_03272 [Ruminococcus obeum ATCC 29174]
Length = 210
Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 93/212 (43%), Positives = 127/212 (59%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++A K+GMT ++N +G+ IPVTVL C V +T + +GY AVQVG GE + K
Sbjct: 1 MKKAILATKVGMTQIFNEDGQLIPVTVLQAGPCVVTQVKTEENDGYAAVQVGYGEIREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP +G F V+ K+ + EFR ++ VG F G +DVT ++ GKGF
Sbjct: 61 VNKPEKGHFDKAGVAAKRFVKEFR-FENAAEYTVGQEIKTDIFADGDHIDVTAVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH HG S HR GS G DP +VFK K M G MG +VTV+NLE+V
Sbjct: 120 QGAIKRHGQSRGPMAHG-SKYHRHAGSNGACSDPSKVFKGKHMPGHMGNVQVTVQNLEIV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + L+LVKG VPG KK S + ++++ KS
Sbjct: 179 RVDTENNLLLVKGAVPGPKK-SLVTIKETVKS 209
>gi|253998014|ref|YP_003050077.1| 50S ribosomal protein L3 [Methylovorus sp. SIP3-4]
gi|313200081|ref|YP_004038739.1| 50S ribosomal protein L3 [Methylovorus sp. MP688]
gi|253984693|gb|ACT49550.1| ribosomal protein L3 [Methylovorus sp. SIP3-4]
gi|312439397|gb|ADQ83503.1| ribosomal protein L3 [Methylovorus sp. MP688]
Length = 214
Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 93/213 (43%), Positives = 131/213 (61%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ EG IPVTVL + +V +T +GY +QV GE +
Sbjct: 1 MSLGLIGRKVGMTRVFTDEGESIPVTVLEVVPNRVTQVKTPSSDGYAGLQVAHGERRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+K + G ++ V+ + EF V +D VG + F GQ VDVTG+++GKG
Sbjct: 61 VTKALAGHYAKAGVAAGSGIKEFAVAEDVLANYAVGGQITVELFQAGQYVDVTGVSLGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+GA+KRHNF RA+HG S SH GS G QDPGRVF K+M G +G + TV+NL++
Sbjct: 121 FAGAIKRHNFSSNRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMPGHLGAVKTTVQNLQI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD +R L+L+KG VPG+ K ++VR + K+
Sbjct: 181 VRVDAERNLLLIKGAVPGS-KGGDVVVRPAVKA 212
>gi|83748149|ref|ZP_00945176.1| LSU ribosomal protein L3P [Ralstonia solanacearum UW551]
gi|83725117|gb|EAP72268.1| LSU ribosomal protein L3P [Ralstonia solanacearum UW551]
Length = 220
Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 93/214 (43%), Positives = 128/214 (59%), Gaps = 2/214 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT V+ +G IPVTVL + +V +T + +GY AVQV G +
Sbjct: 1 MSLGLVGRKVGMTRVFTDDGDSIPVTVLEVGGNRVTQIKTDETDGYTAVQVTFGSRRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP+ G + V + + EFR+ L +G F+ GQ +DV G TIGKG
Sbjct: 61 VTKPLAGHLAKAGVEAGEIIAEFRIDAAKAAELKLGDTIDVDLFSAGQKIDVQGTTIGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KR+NF RA+HG S SH GS G QDPGRVF K+M G MG TV+NL +
Sbjct: 121 YAGTIKRYNFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTRTVQNLVI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
V VD +R L+LVKG VPGA K+ +++V + K+
Sbjct: 181 VRVDAERKLLLVKGAVPGA-KSGFVVVSPAVKAK 213
>gi|163733828|ref|ZP_02141270.1| ribosomal protein L3 [Roseobacter litoralis Och 149]
gi|161392939|gb|EDQ17266.1| ribosomal protein L3 [Roseobacter litoralis Och 149]
Length = 286
Score = 226 bits (575), Expect = 3e-57, Method: Composition-based stats.
Identities = 128/215 (59%), Positives = 161/215 (74%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
+RSGV+A+K+GMT ++ +G++IPVTVL LD QVV RT DK+GY AVQ+GAG AK K
Sbjct: 2 LRSGVIAKKVGMTRLFMEDGKQIPVTVLQLDKLQVVAQRTSDKDGYSAVQLGAGTAKAKR 61
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
S+ MRG F++ V PK+K+ EFRV ++L+ VG + +++ GQ VDV G +IGKGF
Sbjct: 62 TSQAMRGHFAAAKVEPKRKVAEFRVDA-ENLIGVGEEITANHYFEGQFVDVAGTSIGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRHNFGGLRATHGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NL+VV
Sbjct: 121 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLQVV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D RGLI+VKG VPG+ K W+ V+D+ K
Sbjct: 181 RTDADRGLIMVKGAVPGS-KGGWVTVKDAVKKPFP 214
>gi|92112554|ref|YP_572482.1| 50S ribosomal protein L3P [Chromohalobacter salexigens DSM 3043]
gi|123387627|sp|Q1R0H5|RL3_CHRSD RecName: Full=50S ribosomal protein L3
gi|91795644|gb|ABE57783.1| LSU ribosomal protein L3P [Chromohalobacter salexigens DSM 3043]
Length = 212
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 94/212 (44%), Positives = 136/212 (64%), Gaps = 1/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V +K GMT ++ G +PVTV+ ++ +V +T++ +GY AVQV +G K K+
Sbjct: 1 MTIGLVGKKSGMTRIFTENGASVPVTVIEVEPNRVTRVKTVESDGYSAVQVTSGSRKAKH 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++K G ++ V + L EFR+ + ++ VG + S F GQ VDVTG + GKGF
Sbjct: 61 LTKAAAGQYAKSGVEAGRSLMEFRLAEGEEAPEVGGNITVSLFEAGQKVDVTGTSKGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KR NF HG S++HR+ GS G Q PGRVFK KKMAG++G RVTV++LE+V
Sbjct: 121 QGAVKRWNFRTQDNGHGNSLAHRAPGSIGQCQTPGRVFKGKKMAGQLGNERVTVQSLEIV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA + ++VR + K+
Sbjct: 181 RVDAERNLLLVKGAVPGA-TDCEVIVRSAVKA 211
>gi|300702780|ref|YP_003744381.1| 50S ribosomal protein L3 [Ralstonia solanacearum CFBP2957]
gi|299070442|emb|CBJ41737.1| 50S ribosomal subunit protein L3 [Ralstonia solanacearum CFBP2957]
Length = 220
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 93/214 (43%), Positives = 127/214 (59%), Gaps = 2/214 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT V+ +G IPVTVL + +V +T + +GY AVQV G +
Sbjct: 1 MSLGLVGRKVGMTRVFTDDGDSIPVTVLEVGGNRVTQIKTDETDGYTAVQVTFGSRRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP+ G + V + + EFR+ L +G F GQ +DV G TIGKG
Sbjct: 61 VTKPLAGHLAKAGVEAGEIIAEFRIDAAKAAELKLGDTIDVDLFAAGQKIDVQGTTIGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KR+NF RA+HG S SH GS G QDPGRVF K+M G MG TV+NL +
Sbjct: 121 YAGTIKRYNFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTRTVQNLVI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
V VD +R L+LVKG VPGA K+ +++V + K+
Sbjct: 181 VRVDAERKLLLVKGAVPGA-KSGFVVVSPAVKAK 213
>gi|163752594|ref|ZP_02159773.1| ribosomal protein L3 [Shewanella benthica KT99]
gi|161327506|gb|EDP98713.1| ribosomal protein L3 [Shewanella benthica KT99]
Length = 212
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 92/213 (43%), Positives = 133/213 (62%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT ++ +G +PVTV+ + + +V +TL+ +GY A+QV G K
Sbjct: 1 MAIGLIGRKVGMTRIFCEDGVSVPVTVIEITSNRVTQVKTLETDGYRALQVTTGTKKANR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
++KP G F+ V + L+E R+ D+ + + VG+ + F VDVTG + GKG
Sbjct: 61 ITKPEAGHFAKAGVEAGRGLWEVRLADDEGEGIEVGAELNVDIFADIAKVDVTGQSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KR NF THG S+SHRS+GS G Q PGRVFK KKM+G MG RVT +NL+V
Sbjct: 121 FQGGIKRWNFHAQDMTHGNSLSHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLDV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+ VD +R L+LVKG VPGA + I ++ + K+
Sbjct: 181 IRVDAERNLLLVKGAVPGAINGNLI-IKPAVKA 212
>gi|83594020|ref|YP_427772.1| 50S ribosomal protein L3 [Rhodospirillum rubrum ATCC 11170]
gi|109893549|sp|Q2RQW0|RL3_RHORT RecName: Full=50S ribosomal protein L3
gi|83576934|gb|ABC23485.1| LSU ribosomal protein L3P [Rhodospirillum rubrum ATCC 11170]
Length = 235
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 129/215 (60%), Positives = 159/215 (73%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSG++A+K+GMT ++ EG +PVTVL ++ CQVV RT + +GY AVQ+GAG AKVK
Sbjct: 1 MRSGLIAQKVGMTRLFTDEGTHVPVTVLKVEACQVVAVRTSETDGYTAVQLGAGVAKVKR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SK MRG F++ V PKKK+ EFRV + D LL G+ S ++F GQ VD+ G TIGKGF
Sbjct: 61 TSKAMRGHFAAAKVEPKKKVVEFRVSE-DCLLEPGAELSAAHFVAGQKVDIAGTTIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRHNF GL ATHGVS+SHRSHGSTG QDPGRVFK KKMAG MG R+T ++L VV
Sbjct: 120 AGAMKRHNFRGLEATHGVSVSHRSHGSTGQCQDPGRVFKGKKMAGHMGDTRITQQSLTVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
+ D RGLILVKG VPGA +W+ VRD+ K +
Sbjct: 180 ATDADRGLILVKGSVPGAD-GAWLEVRDAVKKKLP 213
>gi|311693271|gb|ADP96144.1| 50S ribosomal protein L3 [marine bacterium HP15]
Length = 212
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 91/213 (42%), Positives = 132/213 (61%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M GVV RK GMT ++ +G+ +PVTV+ ++ ++ +TL+ +GY AVQV G +
Sbjct: 1 MAIGVVGRKAGMTRIFTEDGQALPVTVIEVEPNRITQLKTLESDGYRAVQVTVGTRRSSR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+K G F+ V + ++EFR+ + + L G + S F GQ+VD G + GKG
Sbjct: 61 VTKSEAGHFAKAGVEAGRGMWEFRLADGEGEDLAAGGEITASVFEDGQVVDAIGQSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KR NF ATHG S+SHR+ GS G Q PG+VFK KKMAG+MG +VTV+NL++
Sbjct: 121 FQGGVKRWNFSMQDATHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGQMGNAQVTVQNLKI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD +R L+LV G VPGA + ++ + K+
Sbjct: 181 VRVDAERNLLLVSGAVPGATGGDVV-IKPAVKA 212
>gi|237806875|ref|YP_002891315.1| 50S ribosomal protein L3 [Tolumonas auensis DSM 9187]
gi|259709745|sp|C4L7T0|RL3_TOLAT RecName: Full=50S ribosomal protein L3
gi|237499136|gb|ACQ91729.1| ribosomal protein L3 [Tolumonas auensis DSM 9187]
Length = 212
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 95/213 (44%), Positives = 131/213 (61%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RKLGMT V+ +G IPVTV+ ++ +V +TL+ +GY AVQV G K
Sbjct: 1 MTLGLVGRKLGMTRVFTEDGVSIPVTVIEVEANRVTQLKTLETDGYTAVQVTTGVKKASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
++K G F+ V + L+EFR+ + L VGS F + DVTG++ GKG
Sbjct: 61 LTKAEAGHFAKAEVEAGRGLWEFRLNDGEGADLTVGSELKVDIFADVKKADVTGISKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G +KR NF THG S SHR GS G Q PG+VFK KKMAG +G RVTV++L++
Sbjct: 121 FAGVVKRWNFRTQDMTHGNSRSHRVPGSIGQNQSPGKVFKGKKMAGHLGCERVTVQSLDI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD +R L+L+KG VPGA N ++V+ + K+
Sbjct: 181 VRVDVERNLLLIKGAVPGA-TNGDVIVKPAVKA 212
>gi|126666813|ref|ZP_01737790.1| Ribosomal protein L3 [Marinobacter sp. ELB17]
gi|126628858|gb|EAZ99478.1| Ribosomal protein L3 [Marinobacter sp. ELB17]
Length = 212
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 91/213 (42%), Positives = 133/213 (62%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK GMT ++ +G+ +PVTV+ +D+ ++ +TL+ +GY AVQ+ G +
Sbjct: 1 MAIGIVGRKAGMTRIFTEDGQALPVTVIEVDSNRITQLKTLENDGYRAVQITVGSRRSSR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+K G F+ V + ++EFR+ + + L G + S F GQ VD TG + GKG
Sbjct: 61 VNKSAAGHFAKAGVEAGRSVWEFRLADGEGEDLVAGGEITASVFEDGQAVDATGTSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KR NF ATHG S+SHR+ GS G Q PG+VFK KKMAG+MG +VTV+NL++
Sbjct: 121 FQGGVKRWNFAMQDATHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGQMGNAQVTVQNLKI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD +R L+LV G VPGA + ++ + K+
Sbjct: 181 VRVDAERNLLLVSGAVPGATGGDVV-IKPAVKA 212
>gi|254780261|ref|YP_003064674.1| 50S ribosomal protein L3 [Candidatus Liberibacter asiaticus str.
psy62]
gi|254039938|gb|ACT56734.1| 50S ribosomal protein L3 [Candidatus Liberibacter asiaticus str.
psy62]
Length = 221
Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 221/221 (100%), Positives = 221/221 (100%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN
Sbjct: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF
Sbjct: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV
Sbjct: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS
Sbjct: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
>gi|254488658|ref|ZP_05101863.1| ribosomal protein L3 [Roseobacter sp. GAI101]
gi|214045527|gb|EEB86165.1| ribosomal protein L3 [Roseobacter sp. GAI101]
Length = 294
Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 128/215 (59%), Positives = 159/215 (73%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
+RSGV+A+K+GMT ++ +G++IPVTVL LD QVV RT +++GY AVQ+GAG AKVK
Sbjct: 2 LRSGVIAKKMGMTRLFMEDGKQIPVTVLQLDKLQVVAQRTTERDGYTAVQLGAGTAKVKR 61
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
S PMRG F++ V PK+K+ EFRV + +L VG ++ GQ VDV G +IGKGF
Sbjct: 62 TSAPMRGHFAAAKVEPKRKVAEFRVDP-EAMLNVGEEIIADHYFAGQYVDVAGTSIGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRHNFGGLRATHGVS+SHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV
Sbjct: 121 AGAMKRHNFGGLRATHGVSVSHRSHGSTGQCQDPGKVFKGKKMAGHMGSARVTTQNLEVV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D RGLI+VKG VPG+ K W+ V+D+ K
Sbjct: 181 KTDTVRGLIMVKGAVPGS-KGGWVTVKDAVKKPFP 214
>gi|225574700|ref|ZP_03783310.1| hypothetical protein RUMHYD_02777 [Blautia hydrogenotrophica DSM
10507]
gi|225038090|gb|EEG48336.1| hypothetical protein RUMHYD_02777 [Blautia hydrogenotrophica DSM
10507]
Length = 224
Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 88/212 (41%), Positives = 125/212 (58%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++A K+GMT ++N +G IPVTVL C V +T + +GY AVQVG + +
Sbjct: 15 MKKAILATKVGMTQIFNEDGVLIPVTVLQAGPCVVTQVKTEENDGYSAVQVGYADKRENL 74
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KPM+G F VS K+ + EF++ +G F G +D T ++ GKG+
Sbjct: 75 VNKPMKGHFEKAGVSCKRFVKEFKLDN-AAEYELGQEIKVDVFEAGDHIDATAISKGKGY 133
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH HG S HR GS G DP +VFK KKM G+MG ++T++NLEVV
Sbjct: 134 QGAIKRHGQSRGPMAHG-SKYHRHAGSNGAASDPSKVFKGKKMPGQMGNKQITIQNLEVV 192
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + L+LVKG VPG KK S + ++++ KS
Sbjct: 193 RVDAENNLLLVKGAVPGPKK-SLVTIKETVKS 223
>gi|17547738|ref|NP_521140.1| 50S ribosomal protein L3 [Ralstonia solanacearum GMI1000]
gi|42559667|sp|Q8XV12|RL3_RALSO RecName: Full=50S ribosomal protein L3
gi|17430043|emb|CAD16728.1| probable 50s ribosomal protein l3 [Ralstonia solanacearum GMI1000]
Length = 220
Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 91/214 (42%), Positives = 128/214 (59%), Gaps = 2/214 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT V+ +G IPVTVL + +V +T + +GY AVQV G +
Sbjct: 1 MSLGLVGRKVGMTRVFTDDGDSIPVTVLEVGGNRVTQIKTDETDGYTAVQVTFGTRRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP+ G + V + + EFR+ L +G F+V Q +DV G TIGKG
Sbjct: 61 VTKPLAGHLAKAGVEAGEIIVEFRIDATKAAELKLGDTIDVDLFSVDQKIDVQGTTIGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KR++F RA+HG S SH GS G QDPGRVF K+M G MG TV+NL +
Sbjct: 121 YAGTIKRYHFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTRTVQNLVI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
V +D +R L+LVKG VPGA K+ +++V + K+
Sbjct: 181 VRIDAERKLLLVKGAVPGA-KSGFVVVSPAVKAK 213
>gi|119478132|ref|ZP_01618211.1| 50S ribosomal protein L3 [marine gamma proteobacterium HTCC2143]
gi|119448838|gb|EAW30081.1| 50S ribosomal protein L3 [marine gamma proteobacterium HTCC2143]
Length = 214
Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats.
Identities = 103/213 (48%), Positives = 134/213 (62%), Gaps = 1/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK GMT V+ +G IPVTV+ + +V +T + +GY A QV AG K
Sbjct: 1 MTIGLVGRKSGMTRVFTDDGISIPVTVIEVSPNRVTSVKTGESDGYSAFQVTAGARKASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VSK G F+ +V + L+EFR++ D+ VG+ + S F VGQ VDVTG + GKGF
Sbjct: 61 VSKAEAGQFAKASVEAGRGLWEFRLEDGDEAPVVGAELTVSTFEVGQKVDVTGQSKGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR NF ATHG SISHRS+GS G Q PGRVFK KKM+G MG RVT++ LEVV
Sbjct: 121 QGGIKRWNFQMQDATHGNSISHRSNGSIGQCQTPGRVFKGKKMSGHMGAERVTIQTLEVV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD+ R L+L+KG +PGA ++VR + K
Sbjct: 181 RVDEARNLLLIKGAIPGAP-GGDVIVRPATKVK 212
>gi|110678718|ref|YP_681725.1| ribosomal protein L3 [Roseobacter denitrificans OCh 114]
gi|123362126|sp|Q16AF4|RL3_ROSDO RecName: Full=50S ribosomal protein L3
gi|109454834|gb|ABG31039.1| ribosomal protein L3 [Roseobacter denitrificans OCh 114]
Length = 286
Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats.
Identities = 126/215 (58%), Positives = 161/215 (74%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
+RSGV+A+K+GMT ++ +G++IPVTVL LD QVV RT +K+GY AVQ+GAG AK K
Sbjct: 2 LRSGVIAKKVGMTRLFMEDGKQIPVTVLQLDKLQVVAQRTSEKDGYSAVQLGAGTAKAKR 61
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
S+ MRG F++ V PK+K+ EFRV ++L+ VG + +++ GQ VDV G +IGKGF
Sbjct: 62 TSQAMRGHFAAAKVEPKRKVAEFRVDP-ENLIGVGEEITANHYFEGQFVDVAGTSIGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRHNFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NL+VV
Sbjct: 121 AGAMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLQVV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D RGLI+VKG VPG+ K W+ V+D+ K
Sbjct: 181 RTDANRGLIMVKGAVPGS-KGGWVTVKDAVKKPFP 214
>gi|162149174|ref|YP_001603635.1| 50S ribosomal protein L3 [Gluconacetobacter diazotrophicus PAl 5]
gi|209545082|ref|YP_002277311.1| 50S ribosomal protein L3 [Gluconacetobacter diazotrophicus PAl 5]
gi|189042847|sp|A9H3R5|RL3_GLUDA RecName: Full=50S ribosomal protein L3
gi|161787751|emb|CAP57347.1| 50S ribosomal protein L3 [Gluconacetobacter diazotrophicus PAl 5]
gi|209532759|gb|ACI52696.1| ribosomal protein L3 [Gluconacetobacter diazotrophicus PAl 5]
Length = 227
Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats.
Identities = 132/219 (60%), Positives = 164/219 (74%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+G++A+KLGMT ++ +G +PVTVLH+DN QVV RT D++GY AVQ+G G AKVKN
Sbjct: 1 MRTGLIAKKLGMTRLFKEDGTHVPVTVLHVDNLQVVDVRTQDRDGYTAVQLGFGNAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VSKP RG F+ V V PKKKL EFRV DD +L G+ S ++F VGQ VDVT + GKGF
Sbjct: 61 VSKPNRGHFARVKVEPKKKLAEFRV-ADDAVLEAGATLSAAHFVVGQKVDVTSTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKR NF GL A+HGVSISHRSHGSTG RQDPG+ FKNKKMAG +G RVT NLEV
Sbjct: 120 AGAMKRWNFAGLEASHGVSISHRSHGSTGNRQDPGKTFKNKKMAGHLGSERVTTLNLEVA 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
+VD ++ L++V+G VPG KN +LVRD+ K A + +
Sbjct: 180 AVDAEKNLLMVRGSVPGG-KNELVLVRDAIKKARHAEAP 217
>gi|325267188|ref|ZP_08133855.1| 50S ribosomal protein L3 [Kingella denitrificans ATCC 33394]
gi|324981351|gb|EGC16996.1| 50S ribosomal protein L3 [Kingella denitrificans ATCC 33394]
Length = 215
Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats.
Identities = 104/214 (48%), Positives = 135/214 (63%), Gaps = 2/214 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT V+ +G IPVTVL + +V ++ + +GY AVQV GE K +
Sbjct: 1 MTLGLVGRKVGMTRVFTEQGESIPVTVLEMSANRVTQVKSKETDGYTAVQVTFGEKKTSH 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+K G F+ V + L EF V ++ L G + F+ GQLVDVTG + GKG
Sbjct: 61 VNKAQAGHFAKAGVEAGRGLHEFVVSEEKAAELKAGDSVTVELFSAGQLVDVTGTSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV++LE+
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKSTVQHLEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
V VD +R L+LVKG VPGA NS ++VR S K A
Sbjct: 181 VRVDVERNLLLVKGAVPGAV-NSDVVVRHSVKKA 213
>gi|119773354|ref|YP_926094.1| 50S ribosomal protein L3 [Shewanella amazonensis SB2B]
gi|166234590|sp|A1S218|RL3_SHEAM RecName: Full=50S ribosomal protein L3
gi|119765854|gb|ABL98424.1| LSU ribosomal protein L3P [Shewanella amazonensis SB2B]
Length = 212
Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats.
Identities = 92/213 (43%), Positives = 128/213 (60%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT ++ +G IPVTV+ ++ +V +TL+ +GY A+QV G K
Sbjct: 1 MAIGLIGRKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKTLENDGYRALQVTTGAKKAHR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSV-FSPSYFTVGQLVDVTGMTIGKG 119
V+KP G F+ V + L+E R+ + + + F Q VDVTG + GKG
Sbjct: 61 VTKPEAGHFAKAGVEAGRGLWEMRLGEGEGEGIEVGAELNVEIFADVQKVDVTGQSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KR NF THG S+SHR++GS G Q PGRVFK KKM+G MG RVT +NL+V
Sbjct: 121 FQGGVKRWNFRTQDMTHGNSLSHRANGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLDV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD +R L+LVKG VPGA I ++ + K+
Sbjct: 181 VRVDVERNLLLVKGAVPGATNGDLI-IKPAVKA 212
>gi|53803548|ref|YP_114788.1| 50S ribosomal protein L3 [Methylococcus capsulatus str. Bath]
gi|81823603|sp|Q605B2|RL3_METCA RecName: Full=50S ribosomal protein L3
gi|53757309|gb|AAU91600.1| ribosomal protein L3 [Methylococcus capsulatus str. Bath]
Length = 211
Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats.
Identities = 95/212 (44%), Positives = 130/212 (61%), Gaps = 1/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK GMT ++ G +PVTV+H++ +VV +TL+ +GY A+QV G K
Sbjct: 1 MAIGLVGRKCGMTHIFTDAGAAVPVTVIHVEPNRVVQVKTLESDGYRAIQVTTGSKKRSR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++K G +S V + L+EFR++ D VG+ F GQ VD +IGKGF
Sbjct: 61 LTKADAGHYSKAGVEAGRGLWEFRLEDSDQDYTVGTELGVGVFAEGQFVDARARSIGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KRHNF ATHG S+SHR+ GS G Q PGRVFK K+MAG MG +TV NL +V
Sbjct: 121 AGVVKRHNFRTQDATHGNSLSHRAPGSIGQNQTPGRVFKGKRMAGHMGDKNITVPNLRIV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+D +R L+LVKG VPG K + ++VR + K
Sbjct: 181 GIDAERSLLLVKGAVPG-TKGADVIVRPAAKK 211
>gi|113869431|ref|YP_727920.1| 50S ribosomal protein L3 [Ralstonia eutropha H16]
gi|194291022|ref|YP_002006929.1| 50S ribosomal protein l3 [Cupriavidus taiwanensis LMG 19424]
gi|123133539|sp|Q0K619|RL3_RALEH RecName: Full=50S ribosomal protein L3
gi|226725158|sp|B3R7S3|RL3_CUPTR RecName: Full=50S ribosomal protein L3
gi|113528207|emb|CAJ94552.1| LSU ribosomal protein L3 [Ralstonia eutropha H16]
gi|193224857|emb|CAQ70868.1| 50S ribosomal subunit protein L3 [Cupriavidus taiwanensis LMG
19424]
Length = 216
Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats.
Identities = 90/217 (41%), Positives = 129/217 (59%), Gaps = 2/217 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ +G IPVTV+ + + +V +T + +GY AVQV G +
Sbjct: 1 MSLGLVGRKVGMTRIFTDDGEAIPVTVVEVGDNRVTQIKTDETDGYTAVQVTFGARRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP+ G + V + + EFR+ L G S F VGQ +DV G+TIGKG
Sbjct: 61 VTKPLAGHLAKAGVEAGEIIREFRIDAAKAAELQAGGSLSVDLFEVGQKIDVQGVTIGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KR++F RATHG S SH GS G QDPGRVF K+M G +G TV+NLE+
Sbjct: 121 YAGTIKRYHFASGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTRTVQNLEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
+D +R L+LVKG +PG+ KN ++V + K+
Sbjct: 181 AKIDAERKLLLVKGAIPGS-KNGKVIVTPAVKAKAKA 216
>gi|254427943|ref|ZP_05041650.1| ribosomal protein L3 [Alcanivorax sp. DG881]
gi|196194112|gb|EDX89071.1| ribosomal protein L3 [Alcanivorax sp. DG881]
Length = 211
Score = 224 bits (572), Expect = 6e-57, Method: Composition-based stats.
Identities = 98/213 (46%), Positives = 131/213 (61%), Gaps = 3/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M GV+ RK GMT V+ EG +PVTV+ + +V +T + +GY AVQV GE +
Sbjct: 1 MAIGVIGRKCGMTRVFTEEGVSVPVTVIEVSPNRVSQVKTEESDGYQAVQVTVGERRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+K G F+ V + ++EFR + + GS + F GQ++DVTG + GKGF
Sbjct: 61 VTKAQAGHFAKAGVEAGRGVWEFRAEAGE--FEAGSAVTVEGFEAGQMIDVTGSSKGKGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR NF ATHG S+SHR+ GS G Q PGRVFK KKMAG +G RVTV+NLEVV
Sbjct: 119 AGGVKRWNFSTQDATHGNSLSHRAPGSIGQNQTPGRVFKGKKMAGHLGAERVTVQNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD + L+LVKG VPGA ++VR + K+
Sbjct: 179 RVDADKNLLLVKGAVPGA-TGGDVIVRLAVKAK 210
>gi|308047991|ref|YP_003911557.1| 50S ribosomal protein L3P [Ferrimonas balearica DSM 9799]
gi|307630181|gb|ADN74483.1| LSU ribosomal protein L3P [Ferrimonas balearica DSM 9799]
Length = 212
Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats.
Identities = 96/213 (45%), Positives = 130/213 (61%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ EG IPVTV+ ++ +V +TLD +GY A+QV AG K
Sbjct: 1 MAIGLVGRKVGMTRIFTPEGVSIPVTVIEVEPNRVTQVKTLDTDGYSALQVTAGAKKANR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSV-FSPSYFTVGQLVDVTGMTIGKG 119
V+KP G F+ V + +EFR+ + + FT VDVTG + GKG
Sbjct: 61 VTKPEAGHFAKAGVEAGRGTWEFRLGEGEGEGIELGAELKVDIFTDVAKVDVTGQSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F GA+KR NF THG S+SHR+ GS G Q PG+VFK KKMAG MG RVT +NL+V
Sbjct: 121 FQGAIKRWNFRSQDMTHGNSLSHRAPGSIGQNQSPGKVFKGKKMAGHMGAERVTTQNLDV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD +R L+LVKG +PGA + ++V+ + K+
Sbjct: 181 VRVDVERNLLLVKGAIPGANGGN-VIVKPAVKA 212
>gi|300690160|ref|YP_003751155.1| 50S ribosomal subunit protein L3 [Ralstonia solanacearum PSI07]
gi|299077220|emb|CBJ49846.2| 50S ribosomal subunit protein L3 [Ralstonia solanacearum PSI07]
Length = 220
Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats.
Identities = 94/214 (43%), Positives = 128/214 (59%), Gaps = 2/214 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT V+ +G IPVTVL + +V +T + +GY AVQV G +
Sbjct: 1 MSLGLVGRKVGMTRVFTDDGDSIPVTVLEVGGNRVTQIKTDETDGYTAVQVTFGSRRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP+ G + V + + EFR+ L +G F VGQ +DV G TIGKG
Sbjct: 61 VTKPLAGHLAKAGVEAGEIIVEFRIDAAKAAELKLGDTIDVDLFAVGQKIDVQGTTIGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KR+NF RA+HG S SH GS G QDPGRVF K+M G MG TV+NL +
Sbjct: 121 YAGTIKRYNFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTRTVQNLVI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
V VD +R L+LVKG VPGA K+ +++V + K+
Sbjct: 181 VRVDAERKLLLVKGAVPGA-KSGFVVVSPAVKAK 213
>gi|20808660|ref|NP_623831.1| 50S ribosomal protein L3 [Thermoanaerobacter tengcongensis MB4]
gi|42559656|sp|Q8R7V4|RL3_THETN RecName: Full=50S ribosomal protein L3
gi|20517294|gb|AAM25435.1| Ribosomal protein L3 [Thermoanaerobacter tengcongensis MB4]
Length = 210
Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats.
Identities = 99/213 (46%), Positives = 135/213 (63%), Gaps = 3/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ G++ +K GMT +++ +G IPVTV+ C VV +T++K+GY A+QVG G+ K
Sbjct: 1 MKKGILGKKHGMTQIFDEKGEVIPVTVIEAGPCVVVQKKTVEKDGYNAIQVGFGDVSEKK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP+ G F VSPK+ L EFR+ D VG+ F G VDVTG++ GKGF
Sbjct: 61 LNKPLLGHFKKAGVSPKRYLREFRLD-DISGYEVGTEIKVDIFKPGDRVDVTGISKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR+ +HG S HR GS G DPGR FK KKM GRMG +RVT++NLEVV
Sbjct: 120 AGVIKRYGARRGPMSHG-SKYHRRVGSMGATTDPGRTFKGKKMPGRMGSDRVTIQNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD + L++VKG VPG K S +++RDS KS
Sbjct: 179 KVDPELNLLVVKGSVPGP-KGSLLIIRDSVKSK 210
>gi|307294974|ref|ZP_07574816.1| 50S ribosomal protein L3 [Sphingobium chlorophenolicum L-1]
gi|306879448|gb|EFN10666.1| 50S ribosomal protein L3 [Sphingobium chlorophenolicum L-1]
Length = 251
Score = 224 bits (570), Expect = 8e-57, Method: Composition-based stats.
Identities = 128/219 (58%), Positives = 160/219 (73%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+GV+A+K+GMT ++ +GR IPVTVL L+ QVV + ++++GY+AVQ+GAG AKVKN
Sbjct: 1 MRTGVIAKKVGMTRLFQEDGRHIPVTVLALEGNQVVARKEVERDGYVAVQLGAGVAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP RG F+ V PK +L EFRV +D LL VG+ + +F GQLVDV G T GKGF
Sbjct: 61 VAKPQRGHFAKAEVEPKARLVEFRV-AEDALLDVGAEIAADHFIAGQLVDVAGHTQGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKR FGG+RATHGVSISHR+HGSTG RQDPGRVFKNKKMAG MG T +NLE+V
Sbjct: 120 AGAMKRWGFGGMRATHGVSISHRAHGSTGNRQDPGRVFKNKKMAGHMGDRERTQQNLEIV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
D +RGL+ VKG VPGA K +W+ V D+ K
Sbjct: 180 RTDVERGLLFVKGSVPGA-KGTWLTVSDAVKVKRPADAP 217
>gi|294669824|ref|ZP_06734883.1| hypothetical protein NEIELOOT_01717 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291308217|gb|EFE49460.1| hypothetical protein NEIELOOT_01717 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 214
Score = 224 bits (570), Expect = 8e-57, Method: Composition-based stats.
Identities = 101/212 (47%), Positives = 132/212 (62%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K
Sbjct: 1 MTLGLVGRKVGMTRVFDEQGASVPVTVLEMTPNRVTQLKSEDADGYTAVQVTFGQKKANR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+K G F+ V + L EF V + L G + + F GQLVDVTG + GKG
Sbjct: 61 VNKAEAGHFAKAGVEAGRGLVEFAVSAEKAAELQAGGEVTVALFEAGQLVDVTGTSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
FSG +KRHNF R +HG S SHR GS G QDPGRVF ++MAG+ G + TV+NLE+
Sbjct: 121 FSGTIKRHNFDSQRTSHGNSRSHRVPGSIGMAQDPGRVFPGQRMAGQYGNTKATVQNLEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
V VD +R L+LVKG VPGA NS ++VR S K
Sbjct: 181 VRVDVERHLLLVKGAVPGAV-NSDVIVRPSVK 211
>gi|294142933|ref|YP_003558911.1| 50S ribosomal protein L3 [Shewanella violacea DSS12]
gi|293329402|dbj|BAJ04133.1| ribosomal protein L3 [Shewanella violacea DSS12]
Length = 212
Score = 224 bits (570), Expect = 8e-57, Method: Composition-based stats.
Identities = 91/213 (42%), Positives = 132/213 (61%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT ++ +G +PVTV+ + + +V +TL+ +GY A+QV G K
Sbjct: 1 MAIGLIGRKVGMTRIFCEDGVSVPVTVIEITSNRVTQVKTLETDGYRALQVTTGTKKANR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
++KP G F+ V + L+E R+ D+ + + VG+ + F VDVTG + GKG
Sbjct: 61 ITKPEAGHFAKAGVEAGRGLWEVRLANDEGEGIEVGAELNVDIFADIAKVDVTGQSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KR NF THG S++HRS+GS G Q PGRVFK KKM+G MG RVT +NL V
Sbjct: 121 FQGGIKRWNFHAQDMTHGNSLAHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLNV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+ VD +R L+LVKG VPGA + I ++ + K+
Sbjct: 181 IRVDAERNLLLVKGAVPGAINGNLI-IKPAVKA 212
>gi|253995718|ref|YP_003047782.1| 50S ribosomal protein L3 [Methylotenera mobilis JLW8]
gi|253982397|gb|ACT47255.1| ribosomal protein L3 [Methylotenera mobilis JLW8]
Length = 216
Score = 224 bits (570), Expect = 8e-57, Method: Composition-based stats.
Identities = 86/214 (40%), Positives = 126/214 (58%), Gaps = 2/214 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ +G +PVTVL + +V +T +GY +QV G +
Sbjct: 1 MSLGLIGRKVGMTRVFTEDGASVPVTVLEVVPNRVTQIKTTASDGYTGLQVAYGTRRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
++K + G ++ + + EF V D G+ + F GQ VDVTG ++GKG
Sbjct: 61 INKALTGHYAKSGSAAGAGIHEFSVGDDVLANYTPGANITVDIFQAGQKVDVTGTSLGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+GA+KRH+F RA+HG S SH GS G QDPGRVF K+M G +G +VT +NLE+
Sbjct: 121 FAGAIKRHHFSSNRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMPGHLGAVKVTTQNLEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
V VD +R L+L+KG +PG+ K ++VR + K
Sbjct: 181 VRVDVERNLLLIKGAIPGS-KGGDVVVRPAIKVK 213
>gi|24371829|ref|NP_715871.1| 50S ribosomal protein L3 [Shewanella oneidensis MR-1]
gi|113968544|ref|YP_732337.1| 50S ribosomal protein L3 [Shewanella sp. MR-4]
gi|114045707|ref|YP_736257.1| 50S ribosomal protein L3 [Shewanella sp. MR-7]
gi|117918657|ref|YP_867849.1| 50S ribosomal protein L3 [Shewanella sp. ANA-3]
gi|42559642|sp|Q8EK68|RL3_SHEON RecName: Full=50S ribosomal protein L3
gi|122945060|sp|Q0I0A5|RL3_SHESR RecName: Full=50S ribosomal protein L3
gi|123325489|sp|Q0HNT7|RL3_SHESM RecName: Full=50S ribosomal protein L3
gi|166234595|sp|A0KRM4|RL3_SHESA RecName: Full=50S ribosomal protein L3
gi|24345642|gb|AAN53316.1|AE015473_3 ribosomal protein L3 [Shewanella oneidensis MR-1]
gi|113883228|gb|ABI37280.1| LSU ribosomal protein L3P [Shewanella sp. MR-4]
gi|113887149|gb|ABI41200.1| LSU ribosomal protein L3P [Shewanella sp. MR-7]
gi|117610989|gb|ABK46443.1| LSU ribosomal protein L3P [Shewanella sp. ANA-3]
Length = 212
Score = 224 bits (570), Expect = 9e-57, Method: Composition-based stats.
Identities = 93/213 (43%), Positives = 130/213 (61%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT ++ +G IPVTV+ + +V +TL+ +GY A+QV G K
Sbjct: 1 MAIGLIGRKVGMTRIFTEDGVSIPVTVIEVAGNRVTQVKTLETDGYRALQVTTGTKKANR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
++KP G F+ V + L+E R+ + + + VG+ + F VDVTG + GKG
Sbjct: 61 ITKPEAGHFAKSGVEAGRGLWELRLADGEGEGIEVGAELNVGIFADVAKVDVTGQSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KR NF THG S+SHRS+GS G Q PGRVFK KKM+G MG RVT +NL+V
Sbjct: 121 FQGGVKRWNFRTQDMTHGNSLSHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLDV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD +R L+LVKG VPGA I ++ + K+
Sbjct: 181 VRVDVERNLLLVKGAVPGATNGDLI-IKPAVKA 212
>gi|313904952|ref|ZP_07838323.1| 50S ribosomal protein L3 [Eubacterium cellulosolvens 6]
gi|313470209|gb|EFR65540.1| 50S ribosomal protein L3 [Eubacterium cellulosolvens 6]
Length = 211
Score = 224 bits (570), Expect = 9e-57, Method: Composition-based stats.
Identities = 92/212 (43%), Positives = 120/212 (56%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++A K+GMT +++ G IPVTVL C V +T + +GY AVQVG GE + K
Sbjct: 1 MKKAILATKVGMTQIFDETGASIPVTVLQAGPCVVTQVKTEENDGYAAVQVGFGEIREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP +G F V K+ L EFR V F G +D T ++ GKGF
Sbjct: 61 VNKPKKGQFDKAEVPVKRYLQEFRFDN-AAEYEVKQEIKADIFADGDHIDATAISKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH HG S HR GS G DP +VFK K M G MG +VTV+NLE+V
Sbjct: 120 QGAIKRHGQSRGPMAHG-SKYHRHAGSNGSCSDPSKVFKGKHMPGHMGHVKVTVQNLEIV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + L+LVKG VPG KK S I +++S K+
Sbjct: 179 KVDAENNLLLVKGSVPGPKK-SLITIKESVKA 209
>gi|154253177|ref|YP_001414001.1| 50S ribosomal protein L3 [Parvibaculum lavamentivorans DS-1]
gi|171769627|sp|A7HWR1|RL3_PARL1 RecName: Full=50S ribosomal protein L3
gi|154157127|gb|ABS64344.1| ribosomal protein L3 [Parvibaculum lavamentivorans DS-1]
Length = 251
Score = 224 bits (570), Expect = 9e-57, Method: Composition-based stats.
Identities = 133/220 (60%), Positives = 162/220 (73%), Gaps = 2/220 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+ +K+GMT ++ +GR +PVTVL LDNCQVV RT +KNGY AVQ+G G AK KN
Sbjct: 1 MRSGVIVKKVGMTRLFMEDGRHVPVTVLKLDNCQVVSQRTDEKNGYTAVQLGTGRAKAKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+ RG F+ +V PK +L EFRV D+LL VG + +F GQ VDV+G +IGKGF
Sbjct: 61 VANAQRGQFARASVEPKLELVEFRVSP-DNLLDVGVEITADHFIAGQYVDVSGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKRHNFGGLRATHGVS+SHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV
Sbjct: 120 AGVMKRHNFGGLRATHGVSVSHRSHGSTGQNQDPGKVFKGKKMAGHMGATRVTTQNLEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
D +GLI+VKG VPG+ K W+LVRD+ K+ + V
Sbjct: 180 RTDADKGLIMVKGAVPGS-KGGWVLVRDAVKTKLPEGVPV 218
>gi|126176355|ref|YP_001052504.1| 50S ribosomal protein L3 [Shewanella baltica OS155]
gi|152998749|ref|YP_001364430.1| 50S ribosomal protein L3 [Shewanella baltica OS185]
gi|160873326|ref|YP_001552642.1| 50S ribosomal protein L3 [Shewanella baltica OS195]
gi|217975201|ref|YP_002359952.1| 50S ribosomal protein L3 [Shewanella baltica OS223]
gi|304412765|ref|ZP_07394367.1| 50S ribosomal protein L3 [Shewanella baltica OS183]
gi|307307429|ref|ZP_07587164.1| 50S ribosomal protein L3 [Shewanella baltica BA175]
gi|166234591|sp|A3DA72|RL3_SHEB5 RecName: Full=50S ribosomal protein L3
gi|166234592|sp|A6WHS8|RL3_SHEB8 RecName: Full=50S ribosomal protein L3
gi|189029479|sp|A9KWA2|RL3_SHEB9 RecName: Full=50S ribosomal protein L3
gi|254803689|sp|B8EBK5|RL3_SHEB2 RecName: Full=50S ribosomal protein L3
gi|125999560|gb|ABN63635.1| LSU ribosomal protein L3P [Shewanella baltica OS155]
gi|151363367|gb|ABS06367.1| ribosomal protein L3 [Shewanella baltica OS185]
gi|160858848|gb|ABX47382.1| ribosomal protein L3 [Shewanella baltica OS195]
gi|217500336|gb|ACK48529.1| ribosomal protein L3 [Shewanella baltica OS223]
gi|304348845|gb|EFM13261.1| 50S ribosomal protein L3 [Shewanella baltica OS183]
gi|306910217|gb|EFN40650.1| 50S ribosomal protein L3 [Shewanella baltica BA175]
gi|315265553|gb|ADT92406.1| 50S ribosomal protein L3 [Shewanella baltica OS678]
Length = 212
Score = 224 bits (570), Expect = 9e-57, Method: Composition-based stats.
Identities = 93/213 (43%), Positives = 129/213 (60%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT ++ +G IPVTV+ + +V +TL+ +GY A+QV G K
Sbjct: 1 MAIGLIGRKVGMTRIFTEDGVSIPVTVIEVAGNRVTQVKTLETDGYRALQVTTGTKKANR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFR-VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
++KP G F+ V + L+E R V + + + VG+ + F VDVTG + GKG
Sbjct: 61 ITKPEAGHFAKSGVEAGRGLWEMRLVDGEGEGIEVGAELNVDIFADVAKVDVTGQSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KR NF THG S+SHRS+GS G Q PGRVFK KKM+G MG RVT +NL V
Sbjct: 121 FQGGVKRWNFRTQDMTHGNSLSHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLVV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD +R L+LV+G VPGA I ++ + K+
Sbjct: 181 VRVDVERNLLLVRGAVPGATNGDLI-IKPAVKA 212
>gi|163745537|ref|ZP_02152897.1| ribosomal protein L3 [Oceanibulbus indolifex HEL-45]
gi|161382355|gb|EDQ06764.1| ribosomal protein L3 [Oceanibulbus indolifex HEL-45]
Length = 292
Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 128/215 (59%), Positives = 158/215 (73%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
+RSGV+A+K+GMT ++ +G++IPVTVL LD QVV RT D++GY AVQ+GAG AK K
Sbjct: 2 LRSGVIAKKVGMTRLFMEDGKQIPVTVLQLDKLQVVAQRTADRDGYTAVQLGAGSAKAKR 61
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
S+ MRG F++ V PK+K+ EFRV + +L VG ++ GQ VDV G +IGKGF
Sbjct: 62 TSQAMRGHFAAAKVEPKRKVAEFRVDA-EAMLEVGEEIIADHYFAGQYVDVAGTSIGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRHNFGGLRATHGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV
Sbjct: 121 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D RGLI+VKG VPG+ K W+ V+D+ K
Sbjct: 181 KTDSARGLIMVKGAVPGS-KGGWVTVKDAVKKPFP 214
>gi|23014088|ref|ZP_00053925.1| COG0087: Ribosomal protein L3 [Magnetospirillum magnetotacticum
MS-1]
gi|83312229|ref|YP_422493.1| 50S ribosomal protein L3 [Magnetospirillum magneticum AMB-1]
gi|109893435|sp|Q2W2J1|RL3_MAGMM RecName: Full=50S ribosomal protein L3
gi|82947070|dbj|BAE51934.1| Ribosomal protein L3 [Magnetospirillum magneticum AMB-1]
Length = 229
Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 134/215 (62%), Positives = 164/215 (76%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSG++A+K+GMT ++ +G +PVTVL +D CQVV R+++K+GY+AVQ+GAG AKVKN
Sbjct: 1 MRSGLIAQKVGMTRIFTEDGTHVPVTVLKVDTCQVVSTRSVEKDGYVAVQLGAGTAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VSKP R F+ V PKKKL EFRV ++LL VG+ S ++F GQ VDVTG TIGKGF
Sbjct: 61 VSKPARANFAKAKVEPKKKLVEFRVAP-ENLLEVGTELSAAHFIPGQYVDVTGTTIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR NF GL ATHGVS+SHRSHGSTG RQDPG+VFK KKMAG MG +VT +NL VV
Sbjct: 120 AGGMKRWNFRGLEATHGVSVSHRSHGSTGQRQDPGKVFKGKKMAGHMGDEQVTTQNLTVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
S D RGLILVKG VPG + SW+LVRD+ K +
Sbjct: 180 STDADRGLILVKGSVPG-HEGSWVLVRDAVKRKLP 213
>gi|120596989|ref|YP_961563.1| 50S ribosomal protein L3 [Shewanella sp. W3-18-1]
gi|146294841|ref|YP_001185265.1| 50S ribosomal protein L3 [Shewanella putrefaciens CN-32]
gi|166234594|sp|A4YBY3|RL3_SHEPC RecName: Full=50S ribosomal protein L3
gi|166234596|sp|A1REB4|RL3_SHESW RecName: Full=50S ribosomal protein L3
gi|120557082|gb|ABM23009.1| LSU ribosomal protein L3P [Shewanella sp. W3-18-1]
gi|145566531|gb|ABP77466.1| LSU ribosomal protein L3P [Shewanella putrefaciens CN-32]
gi|319424580|gb|ADV52654.1| 50S ribosomal protein L3 [Shewanella putrefaciens 200]
Length = 212
Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 92/213 (43%), Positives = 130/213 (61%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT ++ +G IPVTV+ + +V +TL+ +GY A+QV G K
Sbjct: 1 MAIGLIGRKVGMTRIFTEDGVSIPVTVIEVAGNRVTQVKTLETDGYRALQVTTGTKKANR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
++KP G F+ V + L+E R++ + + + VG+ + F VDVTG + GKG
Sbjct: 61 ITKPEAGHFAKSGVEAGRGLWEVRLEDGEGEGIEVGAELNVDIFADVAKVDVTGQSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KR NF THG S+SHRS+GS G Q PGRVFK KKM+G MG RVT +NL V
Sbjct: 121 FQGGVKRWNFRTQDMTHGNSLSHRSNGSIGQNQTPGRVFKGKKMSGHMGAERVTTQNLVV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD +R L+LV+G VPGA I ++ + K+
Sbjct: 181 VRVDVERNLLLVRGAVPGATNGDLI-IKPAVKA 212
>gi|73542863|ref|YP_297383.1| 50S ribosomal protein L3 [Ralstonia eutropha JMP134]
gi|109893544|sp|Q46WE4|RL3_RALEJ RecName: Full=50S ribosomal protein L3
gi|72120276|gb|AAZ62539.1| LSU ribosomal protein L3P [Ralstonia eutropha JMP134]
Length = 216
Score = 224 bits (570), Expect = 1e-56, Method: Composition-based stats.
Identities = 90/217 (41%), Positives = 129/217 (59%), Gaps = 2/217 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ +G IPVTV+ + + +V +T + +GY AVQV G +
Sbjct: 1 MSLGLVGRKVGMTRIFTDDGDSIPVTVVEVGDNRVTQIKTDETDGYTAVQVTFGARRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP+ G + V + + EFR+ L G S F VGQ +DV G+TIGKG
Sbjct: 61 VTKPLAGHLAKAGVEAGEIIREFRIDAAKAAELQTGGSLSVDLFEVGQKIDVQGVTIGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KR++F RATHG S SH GS G QDPGRVF K+M G +G TV+NLE+
Sbjct: 121 YAGTIKRYHFASGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTRTVQNLEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
+D +R L+LVKG +PG+ KN ++V + K+
Sbjct: 181 AKIDAERKLLLVKGAIPGS-KNGKVIVTPAVKAKAKA 216
>gi|77165787|ref|YP_344312.1| ribosomal protein L3 [Nitrosococcus oceani ATCC 19707]
gi|254434228|ref|ZP_05047736.1| ribosomal protein L3 [Nitrosococcus oceani AFC27]
gi|109893530|sp|Q3J8R4|RL3_NITOC RecName: Full=50S ribosomal protein L3
gi|76884101|gb|ABA58782.1| LSU ribosomal protein L3P [Nitrosococcus oceani ATCC 19707]
gi|207090561|gb|EDZ67832.1| ribosomal protein L3 [Nitrosococcus oceani AFC27]
Length = 215
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 97/216 (44%), Positives = 140/216 (64%), Gaps = 2/216 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ EG IPVTV+ ++ +TL+++GY AVQV GE +
Sbjct: 1 MAIGLIGRKVGMTRVFTDEGASIPVTVIEATPNRISQVKTLEQDGYQAVQVTVGERRPAR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDD-LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+ ++G F+ NV P +KL EFR ++ + F VGQ VDVTG+T G+G
Sbjct: 61 VTSSLKGHFAKANVEPGRKLQEFRFGAEEGRDIKASGELKVDLFEVGQKVDVTGITRGRG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G ++R++FGG A+HG S+SHR+ GS G Q PGRVFK KKMAG+MG R TV+NLE+
Sbjct: 121 FAGVVRRYHFGGGDASHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGQMGNVRRTVQNLEL 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
V +D+ R L+L+KG +PGA ++V+ + K+ V
Sbjct: 181 VRIDEGRQLLLIKGAIPGAP-GGDVIVKPAVKTVVK 215
>gi|167036801|ref|YP_001664379.1| 50S ribosomal protein L3 [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|256752632|ref|ZP_05493484.1| ribosomal protein L3 [Thermoanaerobacter ethanolicus CCSD1]
gi|320115223|ref|YP_004185382.1| 50S ribosomal protein L3 [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|226730582|sp|B0KCK0|RL3_THEP3 RecName: Full=50S ribosomal protein L3
gi|166855635|gb|ABY94043.1| ribosomal protein L3 [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|256748452|gb|EEU61504.1| ribosomal protein L3 [Thermoanaerobacter ethanolicus CCSD1]
gi|319928314|gb|ADV78999.1| 50S ribosomal protein L3 [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 210
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 97/213 (45%), Positives = 130/213 (61%), Gaps = 3/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ G++ RK GMT +++ +G IPVTV+ C VV +T++ +GY A+QVG G+ K K
Sbjct: 1 MKKGILGRKHGMTQIFDEKGEVIPVTVIEAGPCVVVQKKTVETDGYNAIQVGFGDVKEKR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP+ G F V K+ L EFR+ D VGS F G VDVTG++ GKGF
Sbjct: 61 LTKPLIGHFKKAGVPFKRYLREFRLD-DISGYEVGSEIKVDIFKPGDRVDVTGISKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR+ +HG S HR GS G DPGR FK K M G MG RVT++NLEVV
Sbjct: 120 AGVVKRYGANRGPMSHG-SKYHRRVGSMGATTDPGRTFKGKIMPGHMGHERVTIQNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD + L+LVKG VPG K S ++++DS KS
Sbjct: 179 KVDPELNLLLVKGSVPGP-KGSLLIIKDSVKSK 210
>gi|269128516|ref|YP_003301886.1| 50S ribosomal protein L3 [Thermomonospora curvata DSM 43183]
gi|268313474|gb|ACY99848.1| ribosomal protein L3 [Thermomonospora curvata DSM 43183]
Length = 216
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 101/214 (47%), Positives = 131/214 (61%), Gaps = 2/214 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R GV+ KLGMT V++ EGR +PVTV+ C V RT +K+GY AVQ+G G+ + V
Sbjct: 5 RKGVLGEKLGMTQVFDDEGRIVPVTVVQAGPCVVTQIRTPEKDGYSAVQIGYGQVNPRKV 64
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V+P++ L E R D +G + F G+ VDVTG T GKG +
Sbjct: 65 NKPRMGHFAKAGVTPRRYLTEVRTD-DASEYTLGQEITVEIFKAGEKVDVTGTTKGKGTA 123
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRH FGGL A+HG HRS GS G PGRVFK +MAGRMG R TV+NL + +
Sbjct: 124 GVMKRHGFGGLGASHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNVRKTVQNLTIHA 183
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
VD +GL+L+KG +PG +LVRD+ K A
Sbjct: 184 VDPDKGLLLIKGAIPGP-NGGLVLVRDAVKGAGK 216
>gi|300718705|ref|YP_003743508.1| 50S ribosomal protein L3 [Erwinia billingiae Eb661]
gi|299064541|emb|CAX61661.1| 50S ribosomal protein L3 [Erwinia billingiae Eb661]
Length = 209
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 95/211 (45%), Positives = 135/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V ++L+ +GY A+QV AG K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKSLENDGYTAIQVTAGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR + D+ VG + F+ + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRTVEGDE-FAVGQSINVDIFSDVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA ++V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGA-TGCDLIVKPAVKA 209
>gi|237786395|ref|YP_002907100.1| 50S ribosomal protein L3 [Corynebacterium kroppenstedtii DSM 44385]
gi|259647406|sp|C4LL52|RL3_CORK4 RecName: Full=50S ribosomal protein L3
gi|237759307|gb|ACR18557.1| 50S ribosomal protein L3 [Corynebacterium kroppenstedtii DSM 44385]
Length = 219
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 87/214 (40%), Positives = 122/214 (57%), Gaps = 1/214 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT V++ + R +PVTV+ C V RT +K+GY A+Q+ G+ + V+
Sbjct: 7 KGILGTKLGMTQVFDEDNRVVPVTVVEAGPCVVTQIRTEEKDGYSAIQIAYGDIDPRKVN 66
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP G F+ V+P++ + E R+ VG + F + VDVTG T G GF+G
Sbjct: 67 KPQSGHFAKAGVTPRRYVTEIRMDDVLSDYEVGQDVTVELFGDVKFVDVTGTTRGHGFAG 126
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
AMKRH F G A HG +HR G G PGRVFK +MAGRMG NRVT +NL++ V
Sbjct: 127 AMKRHGFAGQGAAHGNQAAHRRVGGIGACATPGRVFKGTRMAGRMGNNRVTTQNLKLFKV 186
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
D L+L+KG VPG + + V+ + K +
Sbjct: 187 DADSNLLLIKGAVPG-IRGGLVTVKTAVKGGAHA 219
>gi|330432124|gb|AEC17183.1| 50S ribosomal protein L3 [Gallibacterium anatis UMN179]
Length = 209
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 96/211 (45%), Positives = 133/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT ++N +G IPVTV+ ++ +V +TL+ +GY AVQV G K +V
Sbjct: 1 MIGLIGRKVGMTRIFNEDGVSIPVTVIEIEANRVTQVKTLETDGYCAVQVTTGSKKASHV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F V + L+EFRV + ++ +G + F + VDVTG + GKG++
Sbjct: 61 TKPEAGHFVKAGVEAGRGLWEFRVAEGEE-FTLGQEINVDIFADVKKVDVTGTSKGKGYA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PGRVFK KKM+G +G RVTV++LEVV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGRVFKGKKMSGHLGNERVTVQSLEVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA I V+ + K+
Sbjct: 180 VDAERKLLLVKGAVPGATGGDLI-VKPAVKA 209
>gi|294055221|ref|YP_003548879.1| 50S ribosomal protein L3 [Coraliomargarita akajimensis DSM 45221]
gi|293614554|gb|ADE54709.1| 50S ribosomal protein L3 [Coraliomargarita akajimensis DSM 45221]
Length = 214
Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 90/215 (41%), Positives = 121/215 (56%), Gaps = 3/215 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++ +K+GMT V++ R +PVTV+ C V +T +K+GY AVQ+G K
Sbjct: 1 MKVALLGKKIGMTQVFDENNRLVPVTVIEAGPCPVTQVKTSEKDGYSAVQIGYRAQKEHR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+SK G F V P +L EFRV + L VG V + F GQ +DV G T G+GF
Sbjct: 61 LSKAALGHFKKAGVEPLAELREFRV-AAEGELNVGDVLTVEKFEAGQKIDVIGTTKGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR F G A+HG S+ HR GS G Q PG V K KKM G MG + TV+NL VV
Sbjct: 120 QGVVKRWGFHGGPASHG-SMFHRRGGSYGMCQWPGHVIKGKKMPGHMGDKQRTVQNLTVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
V + LILVKG +PG+ + + VR + K+
Sbjct: 179 KVLADKNLILVKGSIPGS-RGGLVTVRTAIKNKTP 212
>gi|160932201|ref|ZP_02079592.1| hypothetical protein CLOLEP_01036 [Clostridium leptum DSM 753]
gi|156868803|gb|EDO62175.1| hypothetical protein CLOLEP_01036 [Clostridium leptum DSM 753]
Length = 210
Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 89/212 (41%), Positives = 128/212 (60%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ G++ +K+GMT +++ G+ +PVTV+ C V +T++ +GY AVQ+G G+ K
Sbjct: 1 MQKGIIGKKIGMTQIFDENGKVVPVTVVEAGPCVVSQKKTVENDGYAAVQIGFGDLKAHK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V KPM G F+ NV+PK+ L EFR D VG + F G VDVTG + GKG+
Sbjct: 61 VKKPMAGHFAKANVAPKRTLREFRFDDIDA-YNVGDLVKADVFAAGDKVDVTGTSKGKGY 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR NF L+ +HG R GS G DP RV+ KKMAG +G RVTV+NL+VV
Sbjct: 120 AGVIKRWNFQRLKESHGSGPVARHGGSIGSCSDPSRVYPGKKMAGHLGSERVTVQNLQVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + LI +KG +PG + + + D+ K+
Sbjct: 180 KVDAENNLIAIKGAIPGPNGGTVV-IHDTVKA 210
>gi|237749515|ref|ZP_04579995.1| large subunit ribosomal protein L3 [Oxalobacter formigenes OXCC13]
gi|229380877|gb|EEO30968.1| large subunit ribosomal protein L3 [Oxalobacter formigenes OXCC13]
Length = 222
Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 94/216 (43%), Positives = 132/216 (61%), Gaps = 2/216 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GM ++ EG IPVTV+ + + +V +T + +GY AVQV G+ +
Sbjct: 5 MSLGLIGRKVGMMRIFTDEGDSIPVTVVDVSDNRVTQVKTTETDGYTAVQVAFGKRRPSR 64
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+K G F+ V L EF V + + G V + F GQ +DV G++IGKG
Sbjct: 65 VNKAAAGHFAKAGVEAGTVLREFTVDESKAAEVKAGDVLPATMFEAGQKIDVQGVSIGKG 124
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KRHNF RATHG S+SH GS G QDPGRVF KKM G MG T++NLE+
Sbjct: 125 YAGTIKRHNFASGRATHGNSLSHNVPGSIGMNQDPGRVFPGKKMTGHMGDVTKTIQNLEI 184
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
+D +R L+LVKG VPGA KN+ ++VR + K+ V+
Sbjct: 185 ARIDAERNLLLVKGAVPGA-KNAEVIVRPAVKTKVS 219
>gi|99080087|ref|YP_612241.1| 50S ribosomal protein L3 [Ruegeria sp. TM1040]
gi|123077810|sp|Q1GK37|RL3_SILST RecName: Full=50S ribosomal protein L3
gi|99036367|gb|ABF62979.1| LSU ribosomal protein L3P [Ruegeria sp. TM1040]
Length = 239
Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 133/215 (61%), Positives = 161/215 (74%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSG++A+K+GMT ++ +G++IPVTVL LD QVV RT DK+GY AVQ+GAG AKVK
Sbjct: 1 MRSGIIAKKVGMTRLFMEDGKQIPVTVLSLDGLQVVAQRTEDKDGYTAVQLGAGSAKVKR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VSK MRG F++ V PK+KL EFRV D L+ VG+ S +F GQ VDVTG +IGKGF
Sbjct: 61 VSKAMRGHFAASKVEPKRKLVEFRV-PADGLIEVGAEISAEHFLEGQKVDVTGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKR NFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV
Sbjct: 120 AGAMKRWNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D RGL+ +KG VPG K+ W+ V+D+ K
Sbjct: 180 KTDADRGLVFIKGAVPGP-KSGWVTVKDAVKKKAP 213
>gi|120553652|ref|YP_958003.1| ribosomal protein L3 [Marinobacter aquaeolei VT8]
gi|166233153|sp|A1TYJ7|RL3_MARAV RecName: Full=50S ribosomal protein L3
gi|120323501|gb|ABM17816.1| LSU ribosomal protein L3P [Marinobacter aquaeolei VT8]
Length = 212
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 92/213 (43%), Positives = 132/213 (61%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M GVV RK GMT ++ EG+ +PVTV+ ++ ++ +TL+ +GY AVQV G +
Sbjct: 1 MAIGVVGRKAGMTRIFTDEGQALPVTVIEVEPNRITQLKTLESDGYRAVQVTVGSRRSSR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+K G F+ V + ++EFR+ + + L G + S F GQ+VD G + GKG
Sbjct: 61 VNKAAAGHFAKAGVEAGRGVWEFRLADGEGEDLAAGGELTVSVFEDGQVVDAVGQSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KR NF ATHG S+SHR+ GS G Q PG+VFK KKMAG+MG +VTV+NL++
Sbjct: 121 FQGGVKRWNFSMQDATHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGQMGNAQVTVQNLKI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD +R L+LV G VPGA + ++ + K+
Sbjct: 181 VRVDAERNLLLVSGAVPGATGGDVV-IKPAVKA 212
>gi|289579145|ref|YP_003477772.1| 50S ribosomal protein L3 [Thermoanaerobacter italicus Ab9]
gi|297545329|ref|YP_003677631.1| 50S ribosomal protein L3 [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|289528858|gb|ADD03210.1| 50S ribosomal protein L3 [Thermoanaerobacter italicus Ab9]
gi|296843104|gb|ADH61620.1| 50S ribosomal protein L3 [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 210
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 97/213 (45%), Positives = 129/213 (60%), Gaps = 3/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ G++ RK GMT +++ +G IPVTV+ C VV +T + +GY A+QVG G+ K K
Sbjct: 1 MKKGILGRKHGMTQIFDEKGEVIPVTVIEAGPCVVVQKKTTETDGYNAIQVGFGDVKEKR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP+ G F V K+ L EFR+ D VGS F G VDVTG++ GKGF
Sbjct: 61 LTKPLIGHFKKAGVPFKRYLREFRLD-DVSGYEVGSEIKVDIFKPGDRVDVTGISKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR+ +HG S HR GS G DPGR FK K M G MG RVT++NLEVV
Sbjct: 120 AGVVKRYGASRGPMSHG-SKYHRRVGSMGATTDPGRTFKGKIMPGHMGHKRVTIQNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD + L+LVKG VPG K S ++++DS KS
Sbjct: 179 KVDPELNLLLVKGSVPGP-KGSLLIIKDSVKSK 210
>gi|238792938|ref|ZP_04636568.1| 50S ribosomal protein L3 [Yersinia intermedia ATCC 29909]
gi|238727792|gb|EEQ19316.1| 50S ribosomal protein L3 [Yersinia intermedia ATCC 29909]
Length = 209
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 95/211 (45%), Positives = 131/211 (62%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V ++L+ +GY AVQV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKSLENDGYRAVQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR+ + G S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRL-PEGQEFTAGQEISVEIFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR+ GS G Q PG+VFK KKMAG MG RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGHMGDERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA + I V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGATGGNLI-VKPAVKA 209
>gi|294010613|ref|YP_003544073.1| ribosomal protein L3 [Sphingobium japonicum UT26S]
gi|292673943|dbj|BAI95461.1| ribosomal protein L3 [Sphingobium japonicum UT26S]
Length = 251
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 128/219 (58%), Positives = 160/219 (73%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+GV+A+K+GMT ++ +GR IPVTVL L+ QVV + ++++GY+AVQ+GAG AKVKN
Sbjct: 1 MRTGVIAKKVGMTRLFQEDGRHIPVTVLALEGNQVVARKEVERDGYVAVQLGAGVAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP RG F+ V PK +L EFRV +D LL VG+ + +F GQLVDV G T GKGF
Sbjct: 61 VAKPQRGHFAKAEVEPKARLVEFRV-AEDALLDVGAEIAADHFIAGQLVDVAGHTQGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKR FGG+RATHGVSISHR+HGSTG RQDPGRVFKNKKMAG MG T +NLE+V
Sbjct: 120 AGAMKRWGFGGMRATHGVSISHRAHGSTGNRQDPGRVFKNKKMAGHMGDRERTQQNLEIV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
D +RGL+ VKG VPGA K +W+ V D+ K
Sbjct: 180 RTDVERGLLFVKGSVPGA-KGTWLTVCDAVKVKRPADAP 217
>gi|331005012|ref|ZP_08328419.1| LSU ribosomal protein L3p (L3e) [gamma proteobacterium IMCC1989]
gi|330421178|gb|EGG95437.1| LSU ribosomal protein L3p (L3e) [gamma proteobacterium IMCC1989]
Length = 212
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 98/213 (46%), Positives = 129/213 (60%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK GMT ++ +G IPVTV+ +D ++ ++ + +GY AVQV G K
Sbjct: 1 MTIGLVGRKSGMTRIFAEDGASIPVTVIEVDPNRITQIKSTEVDGYNAVQVTVGSRKASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VSK G FS N + ++E R + G + + F VGQ VDVTG + GKGF
Sbjct: 61 VSKSAAGHFSKANTEAGRGVWELRNDAKEAFEVGGE-ITVAAFEVGQKVDVTGTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR NF ATHG S+SHR+ GS G Q PGRVFKNKKMAG MG +VTV+ LEVV
Sbjct: 120 AGGVKRWNFAMQDATHGNSLSHRAPGSIGQCQTPGRVFKNKKMAGHMGAEQVTVQTLEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD +R L+L+KG VPGA ++VR + K
Sbjct: 180 RVDSERNLLLIKGAVPGAP-GGDVIVRPATKVK 211
>gi|332187797|ref|ZP_08389531.1| 50S ribosomal protein L3 [Sphingomonas sp. S17]
gi|332012147|gb|EGI54218.1| 50S ribosomal protein L3 [Sphingomonas sp. S17]
Length = 244
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 130/219 (59%), Positives = 161/219 (73%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+GV+A+KLGMT ++ +GR +PVTVL L+ QVV R +D++GY AVQ+GAG AK KN
Sbjct: 1 MRTGVIAKKLGMTRLFQDDGRHVPVTVLALEGVQVVARREMDRDGYTAVQLGAGVAKTKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP RG F V PK+ L EFRV +D LL VG+ + +F GQ VD+ G T GKGF
Sbjct: 61 VAKPQRGHFGKAEVEPKQVLVEFRV-NEDGLLDVGAEIAADHFVPGQYVDIQGRTQGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPGRVFKNKKMAG MG T +NLE+V
Sbjct: 120 AGAMKRWNFGGLRATHGVSVSHRSHGSTGNRQDPGRVFKNKKMAGHMGDKNRTQQNLEIV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
S D +RGLI VKG VPG+ K W++V+D+ K + +
Sbjct: 180 STDVERGLIFVKGSVPGS-KGGWLIVKDAVKVSRHADAP 217
>gi|74316423|ref|YP_314163.1| 50S ribosomal protein L3P [Thiobacillus denitrificans ATCC 25259]
gi|109893570|sp|Q3SLP9|RL3_THIDA RecName: Full=50S ribosomal protein L3
gi|74055918|gb|AAZ96358.1| ribosomal protein L3 [Thiobacillus denitrificans ATCC 25259]
Length = 214
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 99/213 (46%), Positives = 128/213 (60%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ G +PVTVL + N +V RT + +GY AVQV G +
Sbjct: 1 MSIGLVGRKVGMTRIFTENGASVPVTVLEMSNNRVTQVRTPENDGYSAVQVAYGSRRNSR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+K G ++ V + L EFRV D G+ S F GQ VDVTG+T GKG
Sbjct: 61 VNKSEAGHYAKAGVDAGELLREFRVAADVAAQYQPGAAVSVEVFQAGQKVDVTGVTQGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G +KRHNF RA+HG S SH GS G QDPGRVF K+M+G MG T +NLEV
Sbjct: 121 FAGTIKRHNFKSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMSGHMGAVSCTKQNLEV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD +RGL+L+KG VPG+ K ++VR + K
Sbjct: 181 VRVDAERGLVLLKGAVPGS-KGGHVVVRPAVKG 212
>gi|187476539|ref|YP_784563.1| 50S ribosomal protein L3 [Bordetella avium 197N]
gi|109893413|sp|Q2L2G0|RL3_BORA1 RecName: Full=50S ribosomal protein L3
gi|115421125|emb|CAJ47609.1| 50S ribosomal protein L3 [Bordetella avium 197N]
Length = 233
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 98/216 (45%), Positives = 127/216 (58%), Gaps = 3/216 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G+V RK+GMT ++ EG IPVTVL + N +V ++L+ +GY A+QV G + V
Sbjct: 16 RLGLVGRKVGMTRIFTEEGESIPVTVLDVSNNRVTQVKSLESDGYAAIQVTYGNRRASRV 75
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP--SYFTVGQLVDVTGMTIGKG 119
+K G F+ L EFR+ S F GQ VDVTG TIGKG
Sbjct: 76 TKAEAGHFAKAGAEAGSILKEFRLDPTRAAEFTAGSVIAVESVFEAGQQVDVTGTTIGKG 135
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G +KRHNFG RA+HG S SHR GS G QDPGR+F K+MAG +G TV+NL+V
Sbjct: 136 FAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMAGHLGDVTRTVQNLDV 195
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
V VD +RGL+LVKG VPG ++VR + K+
Sbjct: 196 VRVDVERGLLLVKGAVPG-HAGGDVIVRPAVKAPAK 230
>gi|149376686|ref|ZP_01894445.1| 50S ribosomal protein L3 [Marinobacter algicola DG893]
gi|149359059|gb|EDM47524.1| 50S ribosomal protein L3 [Marinobacter algicola DG893]
Length = 212
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 89/213 (41%), Positives = 134/213 (62%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK GMT ++ +G+ + VTV+ ++ ++ +TL+ +GY AVQV G+ +
Sbjct: 1 MAIGIVGRKAGMTRIFTEDGQAVSVTVIEVEPNRITQLKTLESDGYRAVQVTVGKRRSSR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+K G ++ V + L+EFR+ + + L G + S F GQ+VD G + GKG
Sbjct: 61 VTKSEAGHYAKAGVEAGRGLWEFRLADGEGEELAAGGEITASIFEDGQVVDAVGQSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KR NF ATHG S+SHR+ GS G Q PG+VFK KKMAG+MG +VTV+NL+V
Sbjct: 121 FQGGVKRWNFSMQDATHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGQMGNAQVTVQNLQV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD +R L+L++G VPGA + + ++ + K+
Sbjct: 181 VRVDAERNLLLIRGAVPGATGGNVV-IKPAVKA 212
>gi|304321440|ref|YP_003855083.1| 50S ribosomal protein L3 [Parvularcula bermudensis HTCC2503]
gi|303300342|gb|ADM09941.1| 50S ribosomal protein L3 [Parvularcula bermudensis HTCC2503]
Length = 309
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 131/226 (57%), Positives = 165/226 (73%), Gaps = 9/226 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE------ 55
R+GV+A+KLGMT VY EG +P TV+ L+NCQVV HRT +++GY A+Q+GAGE
Sbjct: 24 RTGVIAKKLGMTRVYTAEGTHVPCTVVSLENCQVVSHRTEERDGYSALQLGAGEYLNRKG 83
Query: 56 -AKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGM 114
AK+ VSK RG F+ NV+PK+KL EFRV + D L+ +G+ + ++ GQ VDV G
Sbjct: 84 EAKLGRVSKAARGHFAKANVTPKRKLAEFRV-ETDYLIEIGASLTAEHYVPGQRVDVVGT 142
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
+IGKGF+G MKRHNFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT
Sbjct: 143 SIGKGFAGGMKRHNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGDVRVTT 202
Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
+NLEV+ D RGLIL+KG VPG+ K SWIL+RD+ K + +
Sbjct: 203 QNLEVIRTDVARGLILLKGAVPGS-KGSWILIRDAVKRVRPEEAPM 247
>gi|183600753|ref|ZP_02962246.1| hypothetical protein PROSTU_04347 [Providencia stuartii ATCC 25827]
gi|188019731|gb|EDU57771.1| hypothetical protein PROSTU_04347 [Providencia stuartii ATCC 25827]
Length = 209
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 96/211 (45%), Positives = 133/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++N +V +T + +GY A+QV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEIENNRVTQVKTAETDGYNAIQVTTGSKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SKP G F+ V + L EFR ++ + VG S F + VDVTG + GKGF+
Sbjct: 61 SKPEAGHFAKAGVEAGRILREFRTEEGAE-FNVGQSISVEIFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA S ++V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209
>gi|37528543|ref|NP_931888.1| 50S ribosomal protein L3 [Photorhabdus luminescens subsp. laumondii
TTO1]
gi|42559593|sp|Q7MYF1|RL3_PHOLL RecName: Full=50S ribosomal protein L3
gi|36787981|emb|CAE17098.1| 50S ribosomal protein L3 [Photorhabdus luminescens subsp. laumondii
TTO1]
Length = 209
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 93/211 (44%), Positives = 133/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ +++ +V + LD +GY A+QV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEIEDNRVTQVKELDNDGYRAIQVTTGSKKASRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L EFR+ + ++ VG S F + VDVTG + GKGF+
Sbjct: 61 NKPEAGHFAKAGVEAGRILREFRLSEGEE-YAVGQSISVEIFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF A+HG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDASHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPG+ + I V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGSTGGNLI-VKPAVKA 209
>gi|329850207|ref|ZP_08265052.1| 50S ribosomal protein L3 [Asticcacaulis biprosthecum C19]
gi|328840522|gb|EGF90093.1| 50S ribosomal protein L3 [Asticcacaulis biprosthecum C19]
Length = 242
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 122/219 (55%), Positives = 155/219 (70%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+G++A+KLGMT ++ EG +PVTVL LD CQVV RT K+GY+A+Q+GAG K KN
Sbjct: 1 MRTGLIAKKLGMTRFFDSEGLHVPVTVLALDGCQVVAQRTQGKDGYVALQLGAGTKKAKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
S P R F+ V PK L EFRV + ++L+ VG+ F+ +F GQ VD+ G+TIGKGF
Sbjct: 61 TSNPERVRFAKAQVEPKAILTEFRVSE-ENLIDVGAEFTADHFVEGQRVDIQGVTIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPGR F KKMAG G VT NL V
Sbjct: 120 AGAMKRWNFGGLRATHGVSVSHRSHGSTGQRQDPGRTFPGKKMAGHYGVETVTTLNLTVA 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
+D +RGL+ ++G VPGA+ S++ +RD+ K A K
Sbjct: 180 RIDAERGLVFIRGAVPGAE-GSYVKIRDAVKKAAPAGLK 217
>gi|268593541|ref|ZP_06127762.1| 50S ribosomal protein L3 [Providencia rettgeri DSM 1131]
gi|291310819|gb|EFE51272.1| 50S ribosomal protein L3 [Providencia rettgeri DSM 1131]
Length = 209
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 96/211 (45%), Positives = 133/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++N +V +T + +GY A+QV G K V
Sbjct: 1 MKGLVGKKVGMTRIFTEDGVSIPVTVIEIENNRVTQVKTAETDGYNAIQVTTGSKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L EFR+ +D VG S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRILREFRI-EDSAEYTVGQSISVEIFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA S ++V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGA-TGSNLIVKPAVKA 209
>gi|294085958|ref|YP_003552718.1| 50S ribosomal protein L3 [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292665533|gb|ADE40634.1| 50S ribosomal protein L3 [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 275
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 134/213 (62%), Positives = 160/213 (75%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSG++ARKLGMT V+N G +PVTVL +D+ QVV R +GY AVQ+GAG AK KN
Sbjct: 1 MRSGIIARKLGMTRVFNEAGHHVPVTVLKMDDVQVVSVRNKQVDGYTAVQLGAGMAKAKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VSKPMRG F+ NV PK KL EFRV DD +L VG+ PS+F GQ VDV G T GKGF
Sbjct: 61 VSKPMRGHFAKANVLPKSKLVEFRVS-DDAVLDVGATLVPSHFVAGQKVDVVGTTQGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRHNF GLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG R T +N+EVV
Sbjct: 120 AGAMKRHNFAGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRNTTQNIEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+VDD+ G++L+ G VPG KN W+L+ D+ K+
Sbjct: 180 AVDDEEGVVLLCGAVPGP-KNGWVLISDAIKAK 211
>gi|323173956|gb|EFZ59584.1| ribosomal protein L3 family protein [Escherichia coli LT-68]
Length = 209
Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats.
Identities = 96/211 (45%), Positives = 134/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY A+QV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR+ + ++ PVG S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRLAEGEE-FPVGQSISVELFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA S ++V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209
>gi|238021591|ref|ZP_04602017.1| hypothetical protein GCWU000324_01491 [Kingella oralis ATCC 51147]
gi|237866205|gb|EEP67247.1| hypothetical protein GCWU000324_01491 [Kingella oralis ATCC 51147]
Length = 215
Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats.
Identities = 106/214 (49%), Positives = 138/214 (64%), Gaps = 2/214 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT V+ +G +PVTVL + +V ++ + +GY AVQV GE K +
Sbjct: 1 MALGLVGRKVGMTRVFTEQGASVPVTVLEMTANRVTQVKSKETDGYAAVQVTFGEKKANH 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+K G F+ V + L EF V ++ L G V + S F VGQLVDVTG + GKG
Sbjct: 61 VNKAEAGHFAKAGVEAGRGLHEFVVSEEKAAELKAGDVITVSLFEVGQLVDVTGTSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV++LE+
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKSTVQHLEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
V VD++R L+LVKG VPGA NS ++VR S K A
Sbjct: 181 VRVDEERNLLLVKGAVPGAV-NSNVVVRHSVKKA 213
>gi|302382618|ref|YP_003818441.1| 50S ribosomal protein L3 [Brevundimonas subvibrioides ATCC 15264]
gi|302193246|gb|ADL00818.1| 50S ribosomal protein L3 [Brevundimonas subvibrioides ATCC 15264]
Length = 250
Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats.
Identities = 123/213 (57%), Positives = 157/213 (73%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+GV+A+KLGMT V+ +G+ +PVTVL LD+CQVV RT +++GY+A+Q+GAG K KN
Sbjct: 1 MRTGVIAKKLGMTRVFADDGQHVPVTVLQLDDCQVVGQRTQERDGYVALQLGAGTKKAKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+K R F++ V PK + EFRV DD ++ VG+ S +F VGQ VD+ G TIGKGF
Sbjct: 61 TNKAQRTTFATAEVEPKHVVMEFRVT-DDAMIDVGATLSADHFVVGQKVDIQGETIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G MKR NFGGLRATHGVS+SHRS GSTG RQDPG+ FK KKMAG++G +T +NL +V
Sbjct: 120 QGGMKRWNFGGLRATHGVSVSHRSLGSTGQRQDPGKTFKGKKMAGQLGNETITTQNLTIV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD +RGLILVKG VPG + SW+ VRD+ K
Sbjct: 180 RVDAERGLILVKGAVPG-HEGSWVKVRDAHKKT 211
>gi|126732274|ref|ZP_01748074.1| ribosomal protein L3 [Sagittula stellata E-37]
gi|126707143|gb|EBA06209.1| ribosomal protein L3 [Sagittula stellata E-37]
Length = 279
Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats.
Identities = 126/215 (58%), Positives = 158/215 (73%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT V+ +G++IPVTVL LDN QVV RT + NGY AV +G G AK K
Sbjct: 1 MRSGVIAKKIGMTRVFMEDGKQIPVTVLQLDNLQVVAQRTDETNGYSAVALGCGTAKAKR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
S+ MR FS+ V PK+K+ EFRV ++L+ VG ++ GQ VDV+G+TIGKGF
Sbjct: 61 TSQAMRKVFSNAGVEPKRKIVEFRVAP-ENLIEVGEEIIADHYFEGQFVDVSGITIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKRHNFGGLRATHGVSISHRSHGSTG Q+PG+VFK KKMAG MG RVT +NL+VV
Sbjct: 120 AGGMKRHNFGGLRATHGVSISHRSHGSTGQCQNPGKVFKGKKMAGHMGSVRVTTQNLQVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D RG+I++KG VPG K SW+ ++D+ K V
Sbjct: 180 RTDSDRGVIMIKGAVPGP-KGSWVTIKDAVKKPVP 213
>gi|323164885|gb|EFZ50676.1| ribosomal L3 family protein [Shigella sonnei 53G]
Length = 209
Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats.
Identities = 95/211 (45%), Positives = 133/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY A+QV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRLAEGEE-FTVGQSISVELFAEVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA S ++V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209
>gi|269792794|ref|YP_003317698.1| 50S ribosomal protein L3 [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269100429|gb|ACZ19416.1| ribosomal protein L3 [Thermanaerovibrio acidaminovorans DSM 6589]
Length = 209
Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats.
Identities = 101/209 (48%), Positives = 137/209 (65%), Gaps = 2/209 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V++ EGR +PVTV+ CQVV RT +KNGY AVQ+G G K +
Sbjct: 1 MSMGILGRKVGMTQVFDAEGRAVPVTVVEAGPCQVVEVRTPEKNGYSAVQLGFGSVKPGS 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V++PM+G+F+ V PK+ L EFRV + G F+ G+ VDV G++ GKG+
Sbjct: 61 VNRPMKGYFAKNGVEPKRWLREFRVDEG-HGYEKGQYVKVDLFSEGETVDVVGVSKGKGY 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR FGG A+HG S HR GS+G PG +FK K M GRMGG RVTVKNL+V
Sbjct: 120 AGVMKRFGFGGGPASHGSSKFHRQPGSSGANSYPGHIFKGKTMPGRMGGERVTVKNLKVF 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
+VD + LIL++G +PGA K+ +L+R +
Sbjct: 180 AVDVENNLILLRGAIPGA-KDGLVLIRKA 207
>gi|311277725|ref|YP_003939956.1| 50S ribosomal protein L3 [Enterobacter cloacae SCF1]
gi|308746920|gb|ADO46672.1| 50S ribosomal protein L3 [Enterobacter cloacae SCF1]
Length = 209
Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats.
Identities = 93/211 (44%), Positives = 133/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT ++ +G IPVTV+ ++ +V + L +GY A+QV G K V
Sbjct: 1 MIGLIGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRLAEGEE-FTVGQSISVELFAEVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA S ++V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209
>gi|227505216|ref|ZP_03935265.1| 50S ribosomal protein L3 [Corynebacterium striatum ATCC 6940]
gi|227198190|gb|EEI78238.1| 50S ribosomal protein L3 [Corynebacterium striatum ATCC 6940]
Length = 218
Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats.
Identities = 82/214 (38%), Positives = 121/214 (56%), Gaps = 2/214 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ +KLGMT +++ + R +PVTV+ C V RT + +GY A+Q+ GE + +
Sbjct: 7 KGILGKKLGMTQIFDEDNRVVPVTVVEAGPCVVTQIRTAETDGYNAIQIAFGEIDPRKAN 66
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP G F V+P++ + E R+ D VG + F VDVTG T G G++G
Sbjct: 67 KPAAGHFKKAGVTPRRHVAEIRMD-DTSAYEVGQEVTADIFEGITFVDVTGTTKGHGYAG 125
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
AMKRH F G A HG +HR G G P RVFK +MAGRMG +RVT +NL++ +
Sbjct: 126 AMKRHGFAGQGAAHGNQAAHRRVGGIGACATPARVFKGTRMAGRMGQDRVTTQNLKIQKI 185
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
D + L+L+KG +PGA + + V+ + K +
Sbjct: 186 DAESNLLLIKGAIPGA-RGGLVTVKTAVKGGAHA 218
>gi|167749439|ref|ZP_02421566.1| hypothetical protein EUBSIR_00393 [Eubacterium siraeum DSM 15702]
gi|167657611|gb|EDS01741.1| hypothetical protein EUBSIR_00393 [Eubacterium siraeum DSM 15702]
gi|291532093|emb|CBK97678.1| LSU ribosomal protein L3P [Eubacterium siraeum 70/3]
gi|291558166|emb|CBL35283.1| LSU ribosomal protein L3P [Eubacterium siraeum V10Sc8a]
Length = 211
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 86/213 (40%), Positives = 125/213 (58%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT +++ G+ +PVTV+ C V +T + +GY AVQ+G G+ K+
Sbjct: 1 MTKGLIGKKIGMTQIFDEAGKVVPVTVIEAGPCVVTQLKTAENDGYEAVQLGFGDVSPKH 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KPM G F ++ K+ L EFR+ D + VG V F G ++DV+G++ GKGF
Sbjct: 61 TNKPMTGHFKKNDLPFKRTLKEFRLD-DISNVNVGDVLKADVFAAGDVIDVSGVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRHN L+ THG R GS G P R+FK K MAG MG VTV+NL +V
Sbjct: 120 QGAIKRHNQHRLKETHGTGPVVRQAGSMGACSSPSRIFKGKGMAGHMGAENVTVQNLVIV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+D + LI +KG +PG K + + D+ K A
Sbjct: 180 KIDAENNLIAIKGAIPGP-KGGVVCITDAVKKA 211
>gi|317123097|ref|YP_004103100.1| 50S ribosomal protein L3P [Thermaerobacter marianensis DSM 12885]
gi|315593077|gb|ADU52373.1| LSU ribosomal protein L3P [Thermaerobacter marianensis DSM 12885]
Length = 217
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 100/210 (47%), Positives = 131/210 (62%), Gaps = 3/210 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RKLGMT +++ EGR +PVTV+ C VV RT +++GY AVQ+G GE K
Sbjct: 1 MGVGLLGRKLGMTQIFDDEGRAVPVTVIQAGPCVVVQTRTEERDGYRAVQLGFGEVKPSK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVG-SVFSPSYFTVGQLVDVTGMTIGKG 119
V+KPM G F V+P K L EFR++ DD+ LP + F G+ VDVTG + GKG
Sbjct: 61 VNKPMAGHFRKAGVAPVKVLREFRLEGDDEPLPEVGQQLTVELFKAGEYVDVTGTSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G + RH FG +HG S HR GS G P RVFK ++MAGR G RVTV+ L+V
Sbjct: 121 FLGPIARHGFGRGPMSHG-SKYHRGPGSLGPSTYPARVFKGRRMAGRTGAERVTVRGLQV 179
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
V VD +R L+LVKG VPG + S + +R +
Sbjct: 180 VRVDPERNLLLVKGAVPGP-RGSVVAIRKT 208
>gi|22127860|ref|NP_671283.1| 50S ribosomal protein L3 [Yersinia pestis KIM 10]
gi|45440067|ref|NP_991606.1| 50S ribosomal protein L3 [Yersinia pestis biovar Microtus str.
91001]
gi|51597988|ref|YP_072179.1| 50S ribosomal protein L3 [Yersinia pseudotuberculosis IP 32953]
gi|108809254|ref|YP_653170.1| 50S ribosomal protein L3 [Yersinia pestis Antiqua]
gi|108814019|ref|YP_649786.1| 50S ribosomal protein L3 [Yersinia pestis Nepal516]
gi|145597452|ref|YP_001161527.1| 50S ribosomal protein L3 [Yersinia pestis Pestoides F]
gi|150260743|ref|ZP_01917471.1| 50S ribosomal protein L3 [Yersinia pestis CA88-4125]
gi|153948634|ref|YP_001402863.1| 50S ribosomal protein L3 [Yersinia pseudotuberculosis IP 31758]
gi|162419265|ref|YP_001605175.1| 50S ribosomal protein L3 [Yersinia pestis Angola]
gi|165927910|ref|ZP_02223742.1| ribosomal protein L3 [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165939998|ref|ZP_02228534.1| ribosomal protein L3 [Yersinia pestis biovar Orientalis str. IP275]
gi|166010464|ref|ZP_02231362.1| ribosomal protein L3 [Yersinia pestis biovar Antiqua str. E1979001]
gi|166213230|ref|ZP_02239265.1| ribosomal protein L3 [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167398599|ref|ZP_02304123.1| ribosomal protein L3 [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167418747|ref|ZP_02310500.1| ribosomal protein L3 [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167425639|ref|ZP_02317392.1| ribosomal protein L3 [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|170022544|ref|YP_001719049.1| 50S ribosomal protein L3 [Yersinia pseudotuberculosis YPIII]
gi|186897184|ref|YP_001874296.1| 50S ribosomal protein L3 [Yersinia pseudotuberculosis PB1/+]
gi|218927415|ref|YP_002345290.1| 50S ribosomal protein L3 [Yersinia pestis CO92]
gi|229836309|ref|ZP_04456476.1| 50S ribosomal subunit protein L3 [Yersinia pestis Pestoides A]
gi|229840067|ref|ZP_04460226.1| 50S ribosomal subunit protein L3 [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229842149|ref|ZP_04462304.1| 50S ribosomal subunit protein L3 [Yersinia pestis biovar Orientalis
str. India 195]
gi|229904551|ref|ZP_04519662.1| 50S ribosomal subunit protein L3 [Yersinia pestis Nepal516]
gi|270488233|ref|ZP_06205307.1| 50S ribosomal protein L3 [Yersinia pestis KIM D27]
gi|294502289|ref|YP_003566351.1| 50S ribosomal protein L3 [Yersinia pestis Z176003]
gi|42559671|sp|Q8ZJA9|RL3_YERPE RecName: Full=50S ribosomal protein L3
gi|55977743|sp|P11252|RL3_YERPS RecName: Full=50S ribosomal protein L3
gi|123073062|sp|Q1CCU4|RL3_YERPN RecName: Full=50S ribosomal protein L3
gi|123245521|sp|Q1C2U7|RL3_YERPA RecName: Full=50S ribosomal protein L3
gi|166234609|sp|A4TGZ2|RL3_YERPP RecName: Full=50S ribosomal protein L3
gi|166990943|sp|A7FNN5|RL3_YERP3 RecName: Full=50S ribosomal protein L3
gi|226730592|sp|B2K5N0|RL3_YERPB RecName: Full=50S ribosomal protein L3
gi|226730593|sp|A9R8Z6|RL3_YERPG RecName: Full=50S ribosomal protein L3
gi|226730594|sp|B1JIW1|RL3_YERPY RecName: Full=50S ribosomal protein L3
gi|21960995|gb|AAM87534.1|AE014002_7 50S ribosomal subunit protein L3 [Yersinia pestis KIM 10]
gi|45434922|gb|AAS60483.1| 50S ribosomal protein L3 [Yersinia pestis biovar Microtus str.
91001]
gi|51591270|emb|CAH22936.1| 50S ribosomal protein L3 [Yersinia pseudotuberculosis IP 32953]
gi|108777667|gb|ABG20186.1| LSU ribosomal protein L3P [Yersinia pestis Nepal516]
gi|108781167|gb|ABG15225.1| LSU ribosomal protein L3P [Yersinia pestis Antiqua]
gi|115346026|emb|CAL18892.1| 50S ribosomal protein L3 [Yersinia pestis CO92]
gi|145209148|gb|ABP38555.1| LSU ribosomal protein L3P [Yersinia pestis Pestoides F]
gi|149290151|gb|EDM40228.1| 50S ribosomal protein L3 [Yersinia pestis CA88-4125]
gi|152960129|gb|ABS47590.1| ribosomal protein L3 [Yersinia pseudotuberculosis IP 31758]
gi|162352080|gb|ABX86028.1| ribosomal protein L3 [Yersinia pestis Angola]
gi|165912038|gb|EDR30679.1| ribosomal protein L3 [Yersinia pestis biovar Orientalis str. IP275]
gi|165920186|gb|EDR37487.1| ribosomal protein L3 [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165990554|gb|EDR42855.1| ribosomal protein L3 [Yersinia pestis biovar Antiqua str. E1979001]
gi|166205528|gb|EDR50008.1| ribosomal protein L3 [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166962741|gb|EDR58762.1| ribosomal protein L3 [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167051103|gb|EDR62511.1| ribosomal protein L3 [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167055329|gb|EDR65123.1| ribosomal protein L3 [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|169749078|gb|ACA66596.1| ribosomal protein L3 [Yersinia pseudotuberculosis YPIII]
gi|186700210|gb|ACC90839.1| ribosomal protein L3 [Yersinia pseudotuberculosis PB1/+]
gi|229678669|gb|EEO74774.1| 50S ribosomal subunit protein L3 [Yersinia pestis Nepal516]
gi|229690459|gb|EEO82513.1| 50S ribosomal subunit protein L3 [Yersinia pestis biovar Orientalis
str. India 195]
gi|229696433|gb|EEO86480.1| 50S ribosomal subunit protein L3 [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229706377|gb|EEO92384.1| 50S ribosomal subunit protein L3 [Yersinia pestis Pestoides A]
gi|262360369|gb|ACY57090.1| 50S ribosomal protein L3 [Yersinia pestis D106004]
gi|262364321|gb|ACY60878.1| 50S ribosomal protein L3 [Yersinia pestis D182038]
gi|270336737|gb|EFA47514.1| 50S ribosomal protein L3 [Yersinia pestis KIM D27]
gi|294352748|gb|ADE63089.1| 50S ribosomal protein L3 [Yersinia pestis Z176003]
gi|320013342|gb|ADV96913.1| 50S ribosomal subunit protein L3 [Yersinia pestis biovar Medievalis
str. Harbin 35]
Length = 209
Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 95/211 (45%), Positives = 130/211 (61%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V ++L+ +GY AVQV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKSLENDGYRAVQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR+ + G S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRL-PEGQEFTAGQEISVEIFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG MG RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHMGDERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA + I V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGATGGNLI-VKPAVKA 209
>gi|284923326|emb|CBG36420.1| 50S ribosomal subunit protein L3 [Escherichia coli 042]
Length = 209
Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 95/211 (45%), Positives = 134/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY A+QV G K +V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANSV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRLAEGEE-FTVGQSISVELFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA S ++V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209
>gi|310817008|ref|YP_003964972.1| 50S ribosomal protein L3 [Ketogulonicigenium vulgare Y25]
gi|308755743|gb|ADO43672.1| 50S ribosomal protein L3 [Ketogulonicigenium vulgare Y25]
Length = 237
Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 121/213 (56%), Positives = 162/213 (76%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
+RSG +A+K+GMT ++ +GR++PVTVL +N QVV RT++K+GY AVQ+GAG AK KN
Sbjct: 4 LRSGTIAKKIGMTRLFLEDGRQVPVTVLQFENLQVVAQRTVEKDGYTAVQLGAGTAKAKN 63
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V++PMRG F++ V PK+KL EFRV ++L+PVG+ ++ GQ VD++G +IGKGF
Sbjct: 64 VTQPMRGHFAAAKVEPKRKLAEFRVTP-ENLIPVGAEIIADHYVAGQFVDISGTSIGKGF 122
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKRHNFGGLRA+HGVS+SHRSHGS G QDPGR+FK KKMAG MG RVT +NL+V+
Sbjct: 123 AGVMKRHNFGGLRASHGVSVSHRSHGSVGQCQDPGRIFKGKKMAGHMGSARVTTQNLQVI 182
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D RGL++VKG VPG K W+ ++D+ K
Sbjct: 183 RTDSTRGLVMVKGAVPG-NKGGWVTIKDAVKKK 214
>gi|329118598|ref|ZP_08247302.1| 50S ribosomal protein L3 [Neisseria bacilliformis ATCC BAA-1200]
gi|327465333|gb|EGF11614.1| 50S ribosomal protein L3 [Neisseria bacilliformis ATCC BAA-1200]
Length = 214
Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 101/212 (47%), Positives = 132/212 (62%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K K+
Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLEITPNRVTQLKSEDTDGYTAVQVTFGQKKAKH 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
K G F+ V + L EF + + L VG S S F VGQLVD+TG + GKG
Sbjct: 61 TGKAEAGHFAKAGVEAGRGLVEFALSAEKLSELQVGGEISVSLFEVGQLVDITGTSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
FSG +KRHNF R +HG S SHR GS G QDPGRVF ++MAG+ G + T +NL+V
Sbjct: 121 FSGTIKRHNFDSQRTSHGNSRSHRVPGSIGMAQDPGRVFPGQRMAGQYGNTKSTAQNLQV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
V VD +R L+LVKG VPGA NS ++VR K
Sbjct: 181 VRVDAERNLLLVKGAVPGAV-NSDVIVRPGVK 211
>gi|254362074|ref|ZP_04978199.1| ribosomal protein L3 [Mannheimia haemolytica PHL213]
gi|261493009|ref|ZP_05989551.1| ribosomal protein L3 [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261495171|ref|ZP_05991634.1| ribosomal protein L3 [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|153093630|gb|EDN74595.1| ribosomal protein L3 [Mannheimia haemolytica PHL213]
gi|261309147|gb|EEY10387.1| ribosomal protein L3 [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261311353|gb|EEY12514.1| ribosomal protein L3 [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 209
Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 97/211 (45%), Positives = 132/211 (62%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT V+ +G IPVTV+ ++ +V +TL+ +GY A+QV G K V
Sbjct: 1 MIGLIGRKVGMTRVFTEDGVSIPVTVIEIEANRVTQVKTLENDGYSAIQVTTGSKKASRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F V + L+EFR + ++ +G + FT + VDVTG + GKGF
Sbjct: 61 TKPEAGHFVKAGVEAGRGLWEFRTTEGEE-FTLGQEINVDIFTDVKKVDVTGTSKGKGFQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV
Sbjct: 120 GGVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA N ++V+ + K+
Sbjct: 180 VDVERKLLLVKGAVPGA-TNGDVIVKPAVKA 209
>gi|15803847|ref|NP_289881.1| 50S ribosomal protein L3 [Escherichia coli O157:H7 EDL933]
gi|15833439|ref|NP_312212.1| 50S ribosomal protein L3 [Escherichia coli O157:H7 str. Sakai]
gi|16131199|ref|NP_417779.1| 50S ribosomal subunit protein L3 [Escherichia coli str. K-12
substr. MG1655]
gi|24114598|ref|NP_709108.1| 50S ribosomal protein L3 [Shigella flexneri 2a str. 301]
gi|26249915|ref|NP_755955.1| 50S ribosomal protein L3 [Escherichia coli CFT073]
gi|30065379|ref|NP_839550.1| 50S ribosomal protein L3 [Shigella flexneri 2a str. 2457T]
gi|82545683|ref|YP_409630.1| 50S ribosomal protein L3 [Shigella boydii Sb227]
gi|82778616|ref|YP_404965.1| 50S ribosomal protein L3 [Shigella dysenteriae Sd197]
gi|89110690|ref|AP_004470.1| 50S ribosomal subunit protein L3 [Escherichia coli str. K-12
substr. W3110]
gi|91212757|ref|YP_542743.1| 50S ribosomal protein L3 [Escherichia coli UTI89]
gi|110643559|ref|YP_671289.1| 50S ribosomal protein L3 [Escherichia coli 536]
gi|110807167|ref|YP_690687.1| 50S ribosomal protein L3 [Shigella flexneri 5 str. 8401]
gi|117625598|ref|YP_858921.1| 50S ribosomal protein L3 [Escherichia coli APEC O1]
gi|157156606|ref|YP_001464788.1| 50S ribosomal protein L3 [Escherichia coli E24377A]
gi|157162794|ref|YP_001460112.1| 50S ribosomal protein L3 [Escherichia coli HS]
gi|168752799|ref|ZP_02777821.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4113]
gi|168753088|ref|ZP_02778095.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4401]
gi|168769186|ref|ZP_02794193.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4486]
gi|168785139|ref|ZP_02810146.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC869]
gi|170018444|ref|YP_001723398.1| 50S ribosomal protein L3 [Escherichia coli ATCC 8739]
gi|170082839|ref|YP_001732159.1| 50S ribosomal subunit protein L3 [Escherichia coli str. K-12
substr. DH10B]
gi|170680319|ref|YP_001745582.1| 50S ribosomal protein L3 [Escherichia coli SMS-3-5]
gi|187733677|ref|YP_001882004.1| 50S ribosomal protein L3 [Shigella boydii CDC 3083-94]
gi|188495143|ref|ZP_03002413.1| ribosomal protein L3 [Escherichia coli 53638]
gi|191171516|ref|ZP_03033064.1| ribosomal protein L3 [Escherichia coli F11]
gi|195939869|ref|ZP_03085251.1| 50S ribosomal protein L3 [Escherichia coli O157:H7 str. EC4024]
gi|208806486|ref|ZP_03248823.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4206]
gi|208812110|ref|ZP_03253439.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4045]
gi|208818332|ref|ZP_03258652.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4042]
gi|209398982|ref|YP_002272776.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4115]
gi|209920786|ref|YP_002294870.1| 50S ribosomal protein L3 [Escherichia coli SE11]
gi|215488620|ref|YP_002331051.1| 50S ribosomal protein L3 [Escherichia coli O127:H6 str. E2348/69]
gi|217325713|ref|ZP_03441797.1| ribosomal protein L3 [Escherichia coli O157:H7 str. TW14588]
gi|218550595|ref|YP_002384386.1| 50S ribosomal protein L3 [Escherichia fergusonii ATCC 35469]
gi|218555877|ref|YP_002388790.1| 50S ribosomal protein L3 [Escherichia coli IAI1]
gi|218560381|ref|YP_002393294.1| 50S ribosomal protein L3 [Escherichia coli S88]
gi|218691606|ref|YP_002399818.1| 50S ribosomal protein L3 [Escherichia coli ED1a]
gi|218697012|ref|YP_002404679.1| 50S ribosomal protein L3 [Escherichia coli 55989]
gi|218702082|ref|YP_002409711.1| 50S ribosomal protein L3 [Escherichia coli IAI39]
gi|218706927|ref|YP_002414446.1| 50S ribosomal protein L3 [Escherichia coli UMN026]
gi|227883451|ref|ZP_04001256.1| 50S ribosomal protein L3 [Escherichia coli 83972]
gi|237703050|ref|ZP_04533531.1| ribosomal protein L3 [Escherichia sp. 3_2_53FAA]
gi|238902411|ref|YP_002928207.1| 50S ribosomal subunit protein L3 [Escherichia coli BW2952]
gi|253771856|ref|YP_003034687.1| 50S ribosomal protein L3 [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254038481|ref|ZP_04872537.1| 50S ribosomal protein L3 [Escherichia sp. 1_1_43]
gi|254163248|ref|YP_003046356.1| 50S ribosomal protein L3 [Escherichia coli B str. REL606]
gi|254795257|ref|YP_003080094.1| 50S ribosomal protein L3 [Escherichia coli O157:H7 str. TW14359]
gi|256020679|ref|ZP_05434544.1| 50S ribosomal protein L3 [Shigella sp. D9]
gi|260846118|ref|YP_003223896.1| 50S ribosomal subunit protein L3 [Escherichia coli O103:H2 str.
12009]
gi|260857441|ref|YP_003231332.1| 50S ribosomal subunit protein L3 [Escherichia coli O26:H11 str.
11368]
gi|260870063|ref|YP_003236465.1| 50S ribosomal subunit protein L3 [Escherichia coli O111:H- str.
11128]
gi|261224625|ref|ZP_05938906.1| 50S ribosomal subunit protein L3 [Escherichia coli O157:H7 str.
FRIK2000]
gi|261254481|ref|ZP_05947014.1| 50S ribosomal subunit protein L3 [Escherichia coli O157:H7 str.
FRIK966]
gi|291284678|ref|YP_003501496.1| 50S ribosomal protein L3 [Escherichia coli O55:H7 str. CB9615]
gi|293406917|ref|ZP_06650841.1| 50S ribosomal protein L3 [Escherichia coli FVEC1412]
gi|293412739|ref|ZP_06655407.1| 50S ribosomal protein L3 [Escherichia coli B354]
gi|293416737|ref|ZP_06659374.1| 50S ribosomal protein L3 [Escherichia coli B185]
gi|293453638|ref|ZP_06664057.1| 50S ribosomal protein L3 [Escherichia coli B088]
gi|297516596|ref|ZP_06934982.1| 50S ribosomal protein L3 [Escherichia coli OP50]
gi|298382657|ref|ZP_06992252.1| 50S ribosomal protein L3 [Escherichia coli FVEC1302]
gi|300815470|ref|ZP_07095695.1| 50S ribosomal protein L3 [Escherichia coli MS 107-1]
gi|300822877|ref|ZP_07103013.1| 50S ribosomal protein L3 [Escherichia coli MS 119-7]
gi|300896668|ref|ZP_07115184.1| 50S ribosomal protein L3 [Escherichia coli MS 198-1]
gi|300903568|ref|ZP_07121490.1| 50S ribosomal protein L3 [Escherichia coli MS 84-1]
gi|300918293|ref|ZP_07134897.1| 50S ribosomal protein L3 [Escherichia coli MS 115-1]
gi|300921871|ref|ZP_07138027.1| 50S ribosomal protein L3 [Escherichia coli MS 182-1]
gi|300932213|ref|ZP_07147492.1| 50S ribosomal protein L3 [Escherichia coli MS 187-1]
gi|300935318|ref|ZP_07150328.1| 50S ribosomal protein L3 [Escherichia coli MS 21-1]
gi|300946542|ref|ZP_07160807.1| 50S ribosomal protein L3 [Escherichia coli MS 116-1]
gi|300954805|ref|ZP_07167232.1| 50S ribosomal protein L3 [Escherichia coli MS 175-1]
gi|300973999|ref|ZP_07172406.1| 50S ribosomal protein L3 [Escherichia coli MS 200-1]
gi|300979891|ref|ZP_07174767.1| 50S ribosomal protein L3 [Escherichia coli MS 45-1]
gi|301018816|ref|ZP_07183060.1| 50S ribosomal protein L3 [Escherichia coli MS 69-1]
gi|301021130|ref|ZP_07185170.1| 50S ribosomal protein L3 [Escherichia coli MS 196-1]
gi|301046091|ref|ZP_07193269.1| 50S ribosomal protein L3 [Escherichia coli MS 185-1]
gi|301305529|ref|ZP_07211621.1| 50S ribosomal protein L3 [Escherichia coli MS 124-1]
gi|301325113|ref|ZP_07218647.1| 50S ribosomal protein L3 [Escherichia coli MS 78-1]
gi|301643860|ref|ZP_07243891.1| 50S ribosomal protein L3 [Escherichia coli MS 146-1]
gi|306816337|ref|ZP_07450475.1| 50S ribosomal protein L3 [Escherichia coli NC101]
gi|307140003|ref|ZP_07499359.1| 50S ribosomal protein L3 [Escherichia coli H736]
gi|307315101|ref|ZP_07594684.1| 50S ribosomal protein L3 [Escherichia coli W]
gi|309785642|ref|ZP_07680273.1| ribosomal L3 family protein [Shigella dysenteriae 1617]
gi|309794595|ref|ZP_07689017.1| 50S ribosomal protein L3 [Escherichia coli MS 145-7]
gi|312968355|ref|ZP_07782565.1| ribosomal L3 family protein [Escherichia coli 2362-75]
gi|312972419|ref|ZP_07786593.1| ribosomal L3 family protein [Escherichia coli 1827-70]
gi|331644016|ref|ZP_08345145.1| 50S ribosomal protein L3 [Escherichia coli H736]
gi|331649117|ref|ZP_08350203.1| 50S ribosomal protein L3 [Escherichia coli M605]
gi|331654913|ref|ZP_08355912.1| 50S ribosomal protein L3 [Escherichia coli M718]
gi|331659610|ref|ZP_08360548.1| 50S ribosomal protein L3 [Escherichia coli TA206]
gi|331664933|ref|ZP_08365834.1| 50S ribosomal protein L3 [Escherichia coli TA143]
gi|331670149|ref|ZP_08370988.1| 50S ribosomal protein L3 [Escherichia coli TA271]
gi|331679389|ref|ZP_08380059.1| 50S ribosomal protein L3 [Escherichia coli H591]
gi|331684962|ref|ZP_08385548.1| 50S ribosomal protein L3 [Escherichia coli H299]
gi|42560216|sp|P60438|RL3_ECOLI RecName: Full=50S ribosomal protein L3
gi|42560217|sp|P60439|RL3_ECOL6 RecName: Full=50S ribosomal protein L3
gi|42560218|sp|P60440|RL3_ECO57 RecName: Full=50S ribosomal protein L3
gi|42560221|sp|P60447|RL3_SHIFL RecName: Full=50S ribosomal protein L3
gi|109893554|sp|Q31VV6|RL3_SHIBS RecName: Full=50S ribosomal protein L3
gi|109893555|sp|Q32B31|RL3_SHIDS RecName: Full=50S ribosomal protein L3
gi|123048781|sp|Q0TCE1|RL3_ECOL5 RecName: Full=50S ribosomal protein L3
gi|123084373|sp|Q1R602|RL3_ECOUT RecName: Full=50S ribosomal protein L3
gi|123342427|sp|Q0SZY3|RL3_SHIF8 RecName: Full=50S ribosomal protein L3
gi|166233140|sp|A1AGK7|RL3_ECOK1 RecName: Full=50S ribosomal protein L3
gi|166990934|sp|A7ZSK9|RL3_ECO24 RecName: Full=50S ribosomal protein L3
gi|166990935|sp|A8A5C5|RL3_ECOHS RecName: Full=50S ribosomal protein L3
gi|189042843|sp|B1IPX9|RL3_ECOLC RecName: Full=50S ribosomal protein L3
gi|226725166|sp|B7MCT5|RL3_ECO45 RecName: Full=50S ribosomal protein L3
gi|226725167|sp|B5YTP1|RL3_ECO5E RecName: Full=50S ribosomal protein L3
gi|226725168|sp|B7NLN9|RL3_ECO7I RecName: Full=50S ribosomal protein L3
gi|226725169|sp|B7M1N4|RL3_ECO8A RecName: Full=50S ribosomal protein L3
gi|226725170|sp|B1X6H1|RL3_ECODH RecName: Full=50S ribosomal protein L3
gi|226725171|sp|B7NDU1|RL3_ECOLU RecName: Full=50S ribosomal protein L3
gi|226725172|sp|B6I234|RL3_ECOSE RecName: Full=50S ribosomal protein L3
gi|226725173|sp|B1LHD4|RL3_ECOSM RecName: Full=50S ribosomal protein L3
gi|226725175|sp|B7LS40|RL3_ESCF3 RecName: Full=50S ribosomal protein L3
gi|226730569|sp|B2U2T8|RL3_SHIB3 RecName: Full=50S ribosomal protein L3
gi|254803671|sp|B7UK44|RL3_ECO27 RecName: Full=50S ribosomal protein L3
gi|254803672|sp|B7L4K9|RL3_ECO55 RecName: Full=50S ribosomal protein L3
gi|254803673|sp|B7N0W0|RL3_ECO81 RecName: Full=50S ribosomal protein L3
gi|259647744|sp|C4ZUH5|RL3_ECOBW RecName: Full=50S ribosomal protein L3
gi|33357903|pdb|1P85|B Chain B, Real Space Refined Coordinates Of The 50s Subunit Fitted
Into The Low Resolution Cryo-Em Map Of The Ef-G.Gtp
State Of E. Coli 70s Ribosome
gi|33357931|pdb|1P86|B Chain B, Real Space Refined Coordinates Of The 50s Subunit Fitted
Into The Low Resolution Cryo-Em Map Of The
Initiation-Like State Of E. Coli 70s Ribosome
gi|83754065|pdb|2AW4|D Chain D, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli At 3.5 A Resolution. This File Contains
The 50s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
gi|83754121|pdb|2AWB|D Chain D, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli At 3.5 A Resolution. This File Contains
The 50s Subunit Of The Second 70s Ribosome. The Entire
Crystal Structure Contains Two 70s Ribosomes And Is
Described In Remark 400.
gi|116666574|pdb|1VS6|D Chain D, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With The Antibiotic
Kasugamyin At 3.5a Resolution. This File Contains The
50s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
gi|116666626|pdb|1VS8|D Chain D, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With The Antibiotic
Kasugamyin At 3.5a Resolution. This File Contains The
30s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
gi|116667436|pdb|2GYA|B Chain B, Structure Of The 50s Subunit Of A Pre-Translocational E.
Coli Ribosome Obtained By Fitting Atomic Models For Rna
And Protein Components Into Cryo-Em Map Emd-1056
gi|116667488|pdb|2GYC|B Chain B, Structure Of The 50s Subunit Of A Secm-Stalled E. Coli
Ribosome Complex Obtained By Fitting Atomic Models For
Rna And Protein Components Into Cryo-Em Map Emd-1143
gi|118138094|pdb|2I2T|D Chain D, Crystal Structure Of Ribosome With Messenger Rna And The
Anticodon Stem-Loop Of P-Site Trna. This File Contains
The 50s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
gi|118138148|pdb|2I2V|D Chain D, Crystal Structure Of Ribosome With Messenger Rna And The
Anticodon Stem-Loop Of P-Site Trna. This File Contains
The 50s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
gi|119390348|pdb|2J28|D Chain D, Model Of E. Coli Srp Bound To 70s Rncs
gi|157836049|pdb|2QOV|D Chain D, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Spectinomycin. This
File Contains The 50s Subunit Of The First 70s Ribosome.
The Entire Crystal Structure Contains Two 70s Ribosomes.
gi|157836101|pdb|2QOX|D Chain D, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Spectinomycin. This
File Contains The 50s Subunit Of The Second 70s
Ribosome. The Entire Crystal Structure Contains Two 70s
Ribosomes.
gi|157836153|pdb|2QOZ|D Chain D, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Spectinomycin And
Neomycin. This File Contains The 50s Subunit Of The
First 70s Ribosome, With Neomycin Bound. The Entire
Crystal Structure Contains Two 70s Ribosomes.
gi|157836205|pdb|2QP1|D Chain D, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Spectinomycin And
Neomycin. This File Contains The 50s Subunit Of The
Second 70s Ribosome, With Neomycin Bound. The Entire
Crystal Structure Contains Two 70s Ribosomes.
gi|158429724|pdb|2QAM|D Chain D, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Neomycin. This File
Contains The 50s Subunit Of The First 70s Ribosome, With
Neomycin Bound. The Entire Crystal Structure Contains
Two 70s Ribosomes And Is Described In Remark 400.
gi|158429776|pdb|2QAO|D Chain D, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Neomycin. This File
Contains The 50s Subunit Of The Second 70s Ribosome,
With Neomycin Bound. The Entire Crystal Structure
Contains Two 70s Ribosomes And Is Described In Remark
400.
gi|158429834|pdb|2QBA|D Chain D, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Gentamicin. This File
Contains The 50s Subunit Of The First 70s Ribosome, With
Gentamicin Bound. The Entire Crystal Structure Contains
Two 70s Ribosomes And Is Described In Remark 400.
gi|158429886|pdb|2QBC|D Chain D, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Gentamicin. This File
Contains The 50s Subunit Of The Second 70s Ribosome,
With Gentamicin Bound. The Entire Crystal Structure
Contains Two 70s Ribosomes And Is Described In Remark
400.
gi|158429938|pdb|2QBE|D Chain D, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Ribosome Recycling
Factor (Rrf). This File Contains The 50s Subunit Of The
First 70s Ribosome, With Rrf Bound. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
gi|158429991|pdb|2QBG|D Chain D, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Ribosome Recycling
Factor (Rrf). This File Contains The 50s Subunit Of The
Second 70s Ribosome, With Rrf Bound. The Entire Crystal
Structure Contains Two 70s Ribosomes And Is Described In
Remark 400.
gi|158430044|pdb|2QBI|D Chain D, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Gentamicin And Ribosome
Recycling Factor (Rrf). This File Contains The 50s
Subunit Of The First 70s Ribosome, With Gentamicin And
Rrf Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes And Is Described In Remark 400.
gi|158430097|pdb|2QBK|D Chain D, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Gentamicin And Ribosome
Recycling Factor (Rrf). This File Contains The 50s
Subunit Of The Second 70s Ribosome, With Gentamicin And
Rrf Bound. The Entire Crystal Structure Contains Two 70s
Ribosomes And Is Described In Remark 400.
gi|158431397|pdb|2Z4L|D Chain D, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Paromomycin And
Ribosome Recycling Factor (Rrf). This File Contains The
50s Subunit Of The First 70s Ribosome, With Paromomycin
And Rrf Bound. The Entire Crystal Structure Contains Two
70s Ribosomes And Is Described In Remark 400.
gi|158431450|pdb|2Z4N|D Chain D, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Paromomycin And
Ribosome Recycling Factor (Rrf). This File Contains The
50s Subunit Of The Second 70s Ribosome, With Paromomycin
And Rrf Bound. The Entire Crystal Structure Contains Two
70s Ribosomes And Is Described In Remark 400.
gi|168988734|pdb|2VHM|D Chain D, Structure Of Pdf Binding Helix In Complex With The
Ribosome (Part 1 Of 4)
gi|168988765|pdb|2VHN|D Chain D, Structure Of Pdf Binding Helix In Complex With The
Ribosome. (Part 2 Of 4)
gi|169404606|pdb|2RDO|D Chain D, 50s Subunit With Ef-G(Gdpnp) And Rrf Bound
gi|197107304|pdb|3DF2|D Chain D, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Hygromycin B. This File
Contains The 50s Subunit Of The First 70s Ribosome. The
Entire Crystal Structure Contains Two 70s Ribosomes.
gi|197107356|pdb|3DF4|D Chain D, Crystal Structure Of The Bacterial Ribosome From
Escherichia Coli In Complex With Hygromycin B. This File
Contains The 50s Subunit Of The Second 70s Ribosome. The
Entire Crystal Structure Contains Two 70s Ribosomes.
gi|209870357|pdb|3BBX|D Chain D, The Hsp15 Protein Fitted Into The Low Resolution Cryo-Em
Map 50s.Nc-Trna.Hsp15 Complex
gi|224510762|pdb|3FIK|D Chain D, Ternary Complex-Bound E.Coli 70s Ribosome. This Entry
Consists Of The 50s Subunit.
gi|251837155|pdb|3IY9|C Chain C, Leishmania Tarentolae Mitochondrial Large Ribosomal
Subunit Model
gi|256032397|pdb|3E1B|Y Chain Y, Structure Of The 50s Subunit Of E. Coli Ribosome In Pre-
Accommodation State
gi|256032454|pdb|3E1D|Y Chain Y, Structure Of The 50s Subunit Of E. Coli Ribosome In Post-
Accommodation State
gi|257097345|pdb|3I1N|D Chain D, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
gi|257097397|pdb|3I1P|D Chain D, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
gi|257097451|pdb|3I1R|D Chain D, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
gi|257097505|pdb|3I1T|D Chain D, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
gi|257097560|pdb|3I20|D Chain D, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
gi|257097615|pdb|3I22|D Chain D, Crystal Structure Of The E. Coli 70s Ribosome In An
Intermediate State Of Ratcheting
gi|290560335|pdb|3KCR|D Chain D, Ribosome-Secy Complex. This Entry 3kcr Contains 50s
Ribosomal Subnit. The 30s Ribosomal Subunit Can Be Found
In Pdb Entry 3kc4
gi|294662253|pdb|2WWQ|D Chain D, E.Coli 70s Ribosome Stalled During Translation Of Tnac
Leader Peptide. This File Contains The 50s, The P-Site
Trna And The Tnac Leader Peptide (Part 2 Of 2).
gi|308198358|pdb|1VT2|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To
Cem-101. This File Contains The 50s Subunit Of The
Second 70s Ribosome.
gi|308198732|pdb|3ORB|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To
Cem-101. This File Contains The 50s Subunit Of The First
70s Ribosome Bound To Cem-101.
gi|308388010|pdb|3OFQ|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To
Erythromycin. This File Contains The 50s Subunit Of The
Second 70s Ribosome.
gi|308388041|pdb|3OFR|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To
Erythromycin. This File Contains The 50s Subunit Of The
First 70s Ribosome With Erthromycin Bound.
gi|309320068|pdb|3OFC|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To
Chloramphenicol. This File Contains The 50s Subunit Of
The First 70s Ribosome With Chloramphenicol Bound.
gi|309320099|pdb|3OFD|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To
Chloramphenicol. This File Contains The 50s Subunit Of
The Second 70s Ribosome.
gi|309320172|pdb|3OFZ|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To
Clindamycin. This File Contains The 50s Subunit Of The
First 70s Ribosome Bound To Clindamycin.
gi|309320203|pdb|3OG0|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To
Clindamycin. This File Contains The 50s Subunit Of The
Second 70s Ribosome.
gi|315113657|pdb|3OAS|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To
Telithromycin. This File Contains The 50s Subunit Of The
Second 70s Ribosome.
gi|315113688|pdb|3OAT|D Chain D, Crystal Structure Of The E. Coli Ribosome Bound To
Telithromycin. This File Contains The 50s Subunit Of The
First 70s Ribosome With Telithromycin Bound.
gi|326634213|pdb|3IZT|E Chain E, Structural Insights Into Cognate Vs. Near-Cognate
Discrimination During Decoding. This Entry Contains The
Large Subunit Of A Ribosome Programmed With A
Near-Cognate Codon.
gi|326634246|pdb|3IZU|E Chain E, Structural Insights Into Cognate Vs. Near-Cognate
Discrimination During Decoding. This Entry Contains The
Large Subunit Of A Ribosome Programmed With A Cognate
Codon
gi|329666019|pdb|3J01|D Chain D, Structure Of The Ribosome-Secye Complex In The Membrane
Environment
gi|12517952|gb|AAG58441.1|AE005557_10 50S ribosomal subunit protein L3 [Escherichia coli O157:H7 str.
EDL933]
gi|26110343|gb|AAN82529.1|AE016767_289 50S ribosomal protein L3 [Escherichia coli CFT073]
gi|42827|emb|CAA26460.1| unnamed protein product [Escherichia coli]
gi|606254|gb|AAA58117.1| 50S ribosomal subunit protein L3 [Escherichia coli str. K-12
substr. MG1655]
gi|1789716|gb|AAC76345.1| 50S ribosomal subunit protein L3 [Escherichia coli str. K-12
substr. MG1655]
gi|13363658|dbj|BAB37608.1| 50S ribosomal subunit protein L3 [Escherichia coli O157:H7 str.
Sakai]
gi|24053796|gb|AAN44815.1| 50S ribosomal subunit protein L3 [Shigella flexneri 2a str. 301]
gi|30043641|gb|AAP19361.1| 50S ribosomal subunit protein L3 [Shigella flexneri 2a str. 2457T]
gi|81242764|gb|ABB63474.1| 50S ribosomal subunit protein L3 [Shigella dysenteriae Sd197]
gi|81247094|gb|ABB67802.1| 50S ribosomal subunit protein L3 [Shigella boydii Sb227]
gi|85676721|dbj|BAE77971.1| 50S ribosomal subunit protein L3 [Escherichia coli str. K12 substr.
W3110]
gi|91074331|gb|ABE09212.1| 50S ribosomal subunit protein L3 [Escherichia coli UTI89]
gi|110345151|gb|ABG71388.1| 50S ribosomal protein L3 [Escherichia coli 536]
gi|110616715|gb|ABF05382.1| 50S ribosomal subunit protein L3 [Shigella flexneri 5 str. 8401]
gi|115514722|gb|ABJ02797.1| 50S ribosomal subunit protein L3 [Escherichia coli APEC O1]
gi|157068474|gb|ABV07729.1| ribosomal protein L3 [Escherichia coli HS]
gi|157078636|gb|ABV18344.1| ribosomal protein L3 [Escherichia coli E24377A]
gi|169753372|gb|ACA76071.1| ribosomal protein L3 [Escherichia coli ATCC 8739]
gi|169890674|gb|ACB04381.1| 50S ribosomal subunit protein L3 [Escherichia coli str. K-12
substr. DH10B]
gi|170518037|gb|ACB16215.1| ribosomal protein L3 [Escherichia coli SMS-3-5]
gi|187430669|gb|ACD09943.1| ribosomal protein L3 [Shigella boydii CDC 3083-94]
gi|188013518|gb|EDU51640.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4113]
gi|188490342|gb|EDU65445.1| ribosomal protein L3 [Escherichia coli 53638]
gi|189359274|gb|EDU77693.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4401]
gi|189361771|gb|EDU80190.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4486]
gi|189374499|gb|EDU92915.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC869]
gi|190908143|gb|EDV67734.1| ribosomal protein L3 [Escherichia coli F11]
gi|208726287|gb|EDZ75888.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4206]
gi|208733387|gb|EDZ82074.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4045]
gi|208738455|gb|EDZ86137.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4042]
gi|209160382|gb|ACI37815.1| ribosomal protein L3 [Escherichia coli O157:H7 str. EC4115]
gi|209757038|gb|ACI76831.1| 50S ribosomal subunit protein L3 [Escherichia coli]
gi|209757040|gb|ACI76832.1| 50S ribosomal subunit protein L3 [Escherichia coli]
gi|209757042|gb|ACI76833.1| 50S ribosomal subunit protein L3 [Escherichia coli]
gi|209757044|gb|ACI76834.1| 50S ribosomal subunit protein L3 [Escherichia coli]
gi|209757046|gb|ACI76835.1| 50S ribosomal subunit protein L3 [Escherichia coli]
gi|209914045|dbj|BAG79119.1| 50S ribosomal protein L3 [Escherichia coli SE11]
gi|215266692|emb|CAS11131.1| 50S ribosomal subunit protein L3 [Escherichia coli O127:H6 str.
E2348/69]
gi|217321934|gb|EEC30358.1| ribosomal protein L3 [Escherichia coli O157:H7 str. TW14588]
gi|218353744|emb|CAV00038.1| 50S ribosomal subunit protein L3 [Escherichia coli 55989]
gi|218358136|emb|CAQ90783.1| 50S ribosomal subunit protein L3 [Escherichia fergusonii ATCC
35469]
gi|218362645|emb|CAR00271.1| 50S ribosomal subunit protein L3 [Escherichia coli IAI1]
gi|218367150|emb|CAR04924.1| 50S ribosomal subunit protein L3 [Escherichia coli S88]
gi|218372068|emb|CAR19928.1| 50S ribosomal subunit protein L3 [Escherichia coli IAI39]
gi|218429170|emb|CAR09978.1| 50S ribosomal subunit protein L3 [Escherichia coli ED1a]
gi|218434024|emb|CAR14941.1| 50S ribosomal subunit protein L3 [Escherichia coli UMN026]
gi|222035029|emb|CAP77772.1| 50S ribosomal protein L3 [Escherichia coli LF82]
gi|226838987|gb|EEH71010.1| 50S ribosomal protein L3 [Escherichia sp. 1_1_43]
gi|226902314|gb|EEH88573.1| ribosomal protein L3 [Escherichia sp. 3_2_53FAA]
gi|227839595|gb|EEJ50061.1| 50S ribosomal protein L3 [Escherichia coli 83972]
gi|238859868|gb|ACR61866.1| 50S ribosomal subunit protein L3 [Escherichia coli BW2952]
gi|242378847|emb|CAQ33639.1| 50S ribosomal subunit protein L3, subunit of 50S ribosomal subunit
and ribosome [Escherichia coli BL21(DE3)]
gi|253322900|gb|ACT27502.1| ribosomal protein L3 [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253975149|gb|ACT40820.1| 50S ribosomal protein L3 [Escherichia coli B str. REL606]
gi|253979305|gb|ACT44975.1| 50S ribosomal protein L3 [Escherichia coli BL21(DE3)]
gi|254594657|gb|ACT74018.1| 50S ribosomal subunit protein L3 [Escherichia coli O157:H7 str.
TW14359]
gi|257756090|dbj|BAI27592.1| 50S ribosomal subunit protein L3 [Escherichia coli O26:H11 str.
11368]
gi|257761265|dbj|BAI32762.1| 50S ribosomal subunit protein L3 [Escherichia coli O103:H2 str.
12009]
gi|257766419|dbj|BAI37914.1| 50S ribosomal subunit protein L3 [Escherichia coli O111:H- str.
11128]
gi|260447661|gb|ACX38083.1| ribosomal protein L3 [Escherichia coli DH1]
gi|281180355|dbj|BAI56685.1| 50S ribosomal protein L3 [Escherichia coli SE15]
gi|281602685|gb|ADA75669.1| 50S ribosomal protein L3 [Shigella flexneri 2002017]
gi|290764551|gb|ADD58512.1| 50S ribosomal protein L3 [Escherichia coli O55:H7 str. CB9615]
gi|291321764|gb|EFE61195.1| 50S ribosomal protein L3 [Escherichia coli B088]
gi|291425728|gb|EFE98762.1| 50S ribosomal protein L3 [Escherichia coli FVEC1412]
gi|291431313|gb|EFF04298.1| 50S ribosomal protein L3 [Escherichia coli B185]
gi|291468386|gb|EFF10879.1| 50S ribosomal protein L3 [Escherichia coli B354]
gi|294489959|gb|ADE88715.1| ribosomal protein L3 [Escherichia coli IHE3034]
gi|298276493|gb|EFI18011.1| 50S ribosomal protein L3 [Escherichia coli FVEC1302]
gi|299881660|gb|EFI89871.1| 50S ribosomal protein L3 [Escherichia coli MS 196-1]
gi|300301917|gb|EFJ58302.1| 50S ribosomal protein L3 [Escherichia coli MS 185-1]
gi|300309009|gb|EFJ63529.1| 50S ribosomal protein L3 [Escherichia coli MS 200-1]
gi|300318234|gb|EFJ68018.1| 50S ribosomal protein L3 [Escherichia coli MS 175-1]
gi|300359499|gb|EFJ75369.1| 50S ribosomal protein L3 [Escherichia coli MS 198-1]
gi|300399526|gb|EFJ83064.1| 50S ribosomal protein L3 [Escherichia coli MS 69-1]
gi|300404441|gb|EFJ87979.1| 50S ribosomal protein L3 [Escherichia coli MS 84-1]
gi|300409402|gb|EFJ92940.1| 50S ribosomal protein L3 [Escherichia coli MS 45-1]
gi|300414554|gb|EFJ97864.1| 50S ribosomal protein L3 [Escherichia coli MS 115-1]
gi|300421719|gb|EFK05030.1| 50S ribosomal protein L3 [Escherichia coli MS 182-1]
gi|300453788|gb|EFK17408.1| 50S ribosomal protein L3 [Escherichia coli MS 116-1]
gi|300459474|gb|EFK22967.1| 50S ribosomal protein L3 [Escherichia coli MS 21-1]
gi|300460037|gb|EFK23530.1| 50S ribosomal protein L3 [Escherichia coli MS 187-1]
gi|300524643|gb|EFK45712.1| 50S ribosomal protein L3 [Escherichia coli MS 119-7]
gi|300532362|gb|EFK53424.1| 50S ribosomal protein L3 [Escherichia coli MS 107-1]
gi|300839224|gb|EFK66984.1| 50S ribosomal protein L3 [Escherichia coli MS 124-1]
gi|300847992|gb|EFK75752.1| 50S ribosomal protein L3 [Escherichia coli MS 78-1]
gi|301077763|gb|EFK92569.1| 50S ribosomal protein L3 [Escherichia coli MS 146-1]
gi|305850733|gb|EFM51190.1| 50S ribosomal protein L3 [Escherichia coli NC101]
gi|306905450|gb|EFN35985.1| 50S ribosomal protein L3 [Escherichia coli W]
gi|307555407|gb|ADN48182.1| 50S ribosomal subunit protein L3 [Escherichia coli ABU 83972]
gi|308121645|gb|EFO58907.1| 50S ribosomal protein L3 [Escherichia coli MS 145-7]
gi|308926762|gb|EFP72238.1| ribosomal L3 family protein [Shigella dysenteriae 1617]
gi|309703732|emb|CBJ03073.1| 50S ribosomal subunit protein L3 [Escherichia coli ETEC H10407]
gi|310334796|gb|EFQ01001.1| ribosomal L3 family protein [Escherichia coli 1827-70]
gi|312287180|gb|EFR15090.1| ribosomal L3 family protein [Escherichia coli 2362-75]
gi|312947871|gb|ADR28698.1| 50S ribosomal protein L3 [Escherichia coli O83:H1 str. NRG 857C]
gi|313647370|gb|EFS11822.1| ribosomal L3 family protein [Shigella flexneri 2a str. 2457T]
gi|315062612|gb|ADT76939.1| 50S ribosomal subunit protein L3 [Escherichia coli W]
gi|315137895|dbj|BAJ45054.1| 50S ribosomal protein L3 [Escherichia coli DH1]
gi|315255903|gb|EFU35871.1| 50S ribosomal protein L3 [Escherichia coli MS 85-1]
gi|315284605|gb|EFU44050.1| 50S ribosomal protein L3 [Escherichia coli MS 110-3]
gi|315292363|gb|EFU51715.1| 50S ribosomal protein L3 [Escherichia coli MS 153-1]
gi|315298618|gb|EFU57873.1| 50S ribosomal protein L3 [Escherichia coli MS 16-3]
gi|315616997|gb|EFU97609.1| ribosomal L3 family protein [Escherichia coli 3431]
gi|320173961|gb|EFW49137.1| LSU ribosomal protein L3p (L3e) [Shigella dysenteriae CDC 74-1112]
gi|320180154|gb|EFW55093.1| LSU ribosomal protein L3p (L3e) [Shigella boydii ATCC 9905]
gi|320187038|gb|EFW61750.1| LSU ribosomal protein L3p (L3e) [Shigella flexneri CDC 796-83]
gi|320191649|gb|EFW66299.1| LSU ribosomal protein L3p (L3e) [Escherichia coli O157:H7 str.
EC1212]
gi|320639625|gb|EFX09219.1| 50S ribosomal protein L3 [Escherichia coli O157:H7 str. G5101]
gi|320645123|gb|EFX14139.1| 50S ribosomal protein L3 [Escherichia coli O157:H- str. 493-89]
gi|320650434|gb|EFX18900.1| 50S ribosomal protein L3 [Escherichia coli O157:H- str. H 2687]
gi|320655959|gb|EFX23879.1| 50S ribosomal protein L3 [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320661411|gb|EFX28826.1| 50S ribosomal protein L3 [Escherichia coli O55:H7 str. USDA 5905]
gi|320666433|gb|EFX33416.1| 50S ribosomal protein L3 [Escherichia coli O157:H7 str. LSU-61]
gi|323154158|gb|EFZ40361.1| ribosomal L3 family protein [Escherichia coli EPECa14]
gi|323162999|gb|EFZ48834.1| ribosomal protein L3 family protein [Escherichia coli E128010]
gi|323179144|gb|EFZ64718.1| ribosomal protein L3 family protein [Escherichia coli 1180]
gi|323182798|gb|EFZ68199.1| ribosomal protein L3 family protein [Escherichia coli 1357]
gi|323189075|gb|EFZ74359.1| ribosomal protein L3 family protein [Escherichia coli RN587/1]
gi|323376801|gb|ADX49069.1| 50S ribosomal protein L3 [Escherichia coli KO11]
gi|323934482|gb|EGB30890.1| 50S ribosomal protein L3 [Escherichia coli E1520]
gi|323939258|gb|EGB35470.1| 50S ribosomal protein L3 [Escherichia coli E482]
gi|323944259|gb|EGB40335.1| 50S ribosomal protein L3 [Escherichia coli H120]
gi|323950234|gb|EGB46116.1| 50S ribosomal protein L3 [Escherichia coli H252]
gi|323954557|gb|EGB50340.1| 50S ribosomal protein L3 [Escherichia coli H263]
gi|323959529|gb|EGB55182.1| 50S ribosomal protein L3 [Escherichia coli H489]
gi|323970124|gb|EGB65398.1| 50S ribosomal protein L3 [Escherichia coli TA007]
gi|323974727|gb|EGB69840.1| 50S ribosomal protein L3 [Escherichia coli TW10509]
gi|324009011|gb|EGB78230.1| 50S ribosomal protein L3 [Escherichia coli MS 57-2]
gi|324014936|gb|EGB84155.1| 50S ribosomal protein L3 [Escherichia coli MS 60-1]
gi|324017862|gb|EGB87081.1| 50S ribosomal protein L3 [Escherichia coli MS 117-3]
gi|324111999|gb|EGC05978.1| 50S ribosomal protein L3 [Escherichia fergusonii B253]
gi|324116290|gb|EGC10210.1| 50S ribosomal protein L3 [Escherichia coli E1167]
gi|325498885|gb|EGC96744.1| 50S ribosomal protein L3 [Escherichia fergusonii ECD227]
gi|326344552|gb|EGD68301.1| LSU ribosomal protein L3p (L3e) [Escherichia coli O157:H7 str.
1125]
gi|327250968|gb|EGE62661.1| ribosomal protein L3 family protein [Escherichia coli STEC_7v]
gi|330909362|gb|EGH37876.1| LSU ribosomal protein L3p (L3e) [Escherichia coli AA86]
gi|331036310|gb|EGI08536.1| 50S ribosomal protein L3 [Escherichia coli H736]
gi|331041615|gb|EGI13759.1| 50S ribosomal protein L3 [Escherichia coli M605]
gi|331046928|gb|EGI19006.1| 50S ribosomal protein L3 [Escherichia coli M718]
gi|331052825|gb|EGI24858.1| 50S ribosomal protein L3 [Escherichia coli TA206]
gi|331057443|gb|EGI29429.1| 50S ribosomal protein L3 [Escherichia coli TA143]
gi|331062211|gb|EGI34131.1| 50S ribosomal protein L3 [Escherichia coli TA271]
gi|331072561|gb|EGI43886.1| 50S ribosomal protein L3 [Escherichia coli H591]
gi|331077333|gb|EGI48545.1| 50S ribosomal protein L3 [Escherichia coli H299]
gi|332085471|gb|EGI90637.1| ribosomal protein L3 family protein [Shigella boydii 5216-82]
gi|332086009|gb|EGI91173.1| ribosomal protein L3 family protein [Shigella dysenteriae 155-74]
gi|332090310|gb|EGI95408.1| ribosomal protein L3 family protein [Shigella boydii 3594-74]
gi|332104227|gb|EGJ07573.1| 50S ribosomal subunit protein L3 [Shigella sp. D9]
gi|223116|prf||0509226A protein L3
Length = 209
Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 95/211 (45%), Positives = 133/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY A+QV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRLAEGEE-FTVGQSISVELFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA S ++V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209
>gi|74313839|ref|YP_312258.1| 50S ribosomal protein L3 [Shigella sonnei Ss046]
gi|109893556|sp|Q3YWT9|RL3_SHISS RecName: Full=50S ribosomal protein L3
gi|73857316|gb|AAZ90023.1| 50S ribosomal subunit protein L3 [Shigella sonnei Ss046]
Length = 209
Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats.
Identities = 95/211 (45%), Positives = 132/211 (62%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K GMT ++ +G IPVTV+ ++ +V + L +GY A+QV G K V
Sbjct: 1 MIGLVGKKAGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRLAEGEE-FTVGQSISVELFAEVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA S ++V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209
>gi|212708981|ref|ZP_03317109.1| hypothetical protein PROVALCAL_00013 [Providencia alcalifaciens DSM
30120]
gi|212688347|gb|EEB47875.1| hypothetical protein PROVALCAL_00013 [Providencia alcalifaciens DSM
30120]
Length = 209
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 95/211 (45%), Positives = 133/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++N +V +T + +GY A+QV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEIENNRVTQVKTAETDGYNAIQVTTGSKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L EFR ++ + VG S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRILREFRTEEGAE-FNVGQSISVEIFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA S ++V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGA-TGSNLIVKPAVKA 209
>gi|167039520|ref|YP_001662505.1| 50S ribosomal protein L3 [Thermoanaerobacter sp. X514]
gi|300915229|ref|ZP_07132544.1| 50S ribosomal protein L3 [Thermoanaerobacter sp. X561]
gi|307725153|ref|YP_003904904.1| 50S ribosomal protein L3 [Thermoanaerobacter sp. X513]
gi|226730583|sp|B0K5P3|RL3_THEPX RecName: Full=50S ribosomal protein L3
gi|166853760|gb|ABY92169.1| ribosomal protein L3 [Thermoanaerobacter sp. X514]
gi|300888953|gb|EFK84100.1| 50S ribosomal protein L3 [Thermoanaerobacter sp. X561]
gi|307582214|gb|ADN55613.1| 50S ribosomal protein L3 [Thermoanaerobacter sp. X513]
Length = 210
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 95/213 (44%), Positives = 129/213 (60%), Gaps = 3/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ G++ RK GMT +++ +G IPVTV+ C VV +T++ +GY A+QVG G+ K K
Sbjct: 1 MKKGILGRKHGMTQIFDEKGEVIPVTVIEAGPCVVVQKKTVETDGYNAIQVGFGDVKEKR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP+ G F V K+ L EFR+ D VGS F G V+VTG++ GKGF
Sbjct: 61 LTKPLIGHFKKAGVPFKRYLREFRLD-DISGYEVGSEIKVDIFKPGDRVNVTGISKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR+ +HG S HR GS DPGR FK K M G MG RVT++NLEVV
Sbjct: 120 AGVVKRYGANRGPMSHG-SKYHRRVGSMSATTDPGRTFKGKIMPGHMGHERVTIQNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD + L+LVKG VPG K S ++++DS KS
Sbjct: 179 KVDPELNLLLVKGSVPGP-KGSLLIIKDSVKSK 210
>gi|307132839|ref|YP_003884855.1| 50S ribosomal subunit protein L3 [Dickeya dadantii 3937]
gi|306530368|gb|ADN00299.1| 50S ribosomal subunit protein L3 [Dickeya dadantii 3937]
Length = 209
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 97/211 (45%), Positives = 133/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V +TL+ +GY AVQV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKTLENDGYSAVQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L EFR+ D + VG S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRVLREFRL-ADGEEFAVGQDISVEIFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA S ++V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209
>gi|304399291|ref|ZP_07381157.1| 50S ribosomal protein L3 [Pantoea sp. aB]
gi|308188357|ref|YP_003932488.1| 50S ribosomal protein L3 [Pantoea vagans C9-1]
gi|304353217|gb|EFM17598.1| 50S ribosomal protein L3 [Pantoea sp. aB]
gi|308058867|gb|ADO11039.1| 50S ribosomal protein L3 [Pantoea vagans C9-1]
Length = 209
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 94/211 (44%), Positives = 133/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V + L+ +GY A+QV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKGLENDGYQAIQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR + ++ VG S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRTAEGEE-YSVGQSISVEIFAEVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA S ++V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209
>gi|259415840|ref|ZP_05739760.1| 50S ribosomal protein L3 [Silicibacter sp. TrichCH4B]
gi|259347279|gb|EEW59056.1| 50S ribosomal protein L3 [Silicibacter sp. TrichCH4B]
Length = 239
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 133/215 (61%), Positives = 161/215 (74%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSG++A+K+GMT ++ +G++IPVTVL LD QVV RT DK+GY AVQ+GAG AKVK
Sbjct: 1 MRSGIIAKKVGMTRLFMEDGKQIPVTVLSLDGLQVVAQRTEDKDGYTAVQLGAGSAKVKR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VSK MRG F++ V PK+KL EFRV D L+ VG+ S +F GQ VDVTG +IGKGF
Sbjct: 61 VSKAMRGHFAASKVEPKRKLVEFRV-PADGLIEVGAEISAEHFLTGQKVDVTGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKR NFGGLRA+HGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +NLEVV
Sbjct: 120 AGAMKRWNFGGLRASHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAARVTTQNLEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D RGL+ +KG VPG K+ W+ V+D+ K
Sbjct: 180 KTDADRGLVFIKGAVPGP-KSGWVTVKDAVKKKAP 213
>gi|307628355|gb|ADN72659.1| 50S ribosomal protein L3 [Escherichia coli UM146]
Length = 209
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 94/211 (44%), Positives = 133/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY A+QV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRLAEGEE-FTVGQSISVELFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+V+
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVIR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA S ++V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209
>gi|146313385|ref|YP_001178459.1| 50S ribosomal protein L3 [Enterobacter sp. 638]
gi|166990936|sp|A4WFC8|RL3_ENT38 RecName: Full=50S ribosomal protein L3
gi|145320261|gb|ABP62408.1| LSU ribosomal protein L3P [Enterobacter sp. 638]
Length = 209
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 96/211 (45%), Positives = 133/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY AVQV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGSKKASRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRLAEGEE-FTVGQDISVELFAEVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA S ++V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGA-TGSNLIVKPAVKA 209
>gi|296131836|ref|YP_003639083.1| 50S ribosomal protein L3 [Thermincola sp. JR]
gi|296030414|gb|ADG81182.1| 50S ribosomal protein L3 [Thermincola potens JR]
Length = 209
Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats.
Identities = 88/213 (41%), Positives = 130/213 (61%), Gaps = 4/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++N +G +PVTV+ C VV +T++ +GY ++Q+G GE +
Sbjct: 1 MSKGILGKKIGMTQIFNEQGEVLPVTVVEAGPCVVVQKKTVETDGYNSIQLGFGEKRESL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP++G F+ V P K L EF+V DD +G F G+ VDV G + GKGF
Sbjct: 61 LTKPLKGHFAKAGVKPMKYLKEFKVVNIDD-YQLGQEIKVDIFEAGERVDVEGTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR+NF HG S SHR GS G + P RVFK K G +G +VT++NLE+V
Sbjct: 120 AGTIKRYNFQRGPMAHG-SKSHRRVGSAG-AKGPARVFKGTKRPGHLGAEKVTIQNLEIV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD +R L+L+KG +PG K S + V+ S K+
Sbjct: 178 KVDPERNLLLIKGAIPGP-KGSLVAVKSSVKAK 209
>gi|296268550|ref|YP_003651182.1| 50S ribosomal protein L3 [Thermobispora bispora DSM 43833]
gi|296091337|gb|ADG87289.1| ribosomal protein L3 [Thermobispora bispora DSM 43833]
Length = 218
Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 128/215 (59%), Gaps = 2/215 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
GV+ +KLGMT V++ R +PVTV+ C V RT +K+GY A+Q+G G+ + V+
Sbjct: 6 KGVLGKKLGMTQVFDEANRVVPVTVVEAGPCVVTRVRTPEKDGYSAIQLGYGQIDPRKVN 65
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP+ + N++P++ E R D +G + F G VDVTG + GKGF+G
Sbjct: 66 KPLGDYLRKHNITPRRYFAEIRTD-DASEYTLGQEITVDIFQPGDYVDVTGRSKGKGFAG 124
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F GL +HG HRS GS G PGRVFK +MAGRMG R TV+NL+V +V
Sbjct: 125 VMKRHGFRGLGGSHGTQRKHRSPGSIGACATPGRVFKGLRMAGRMGNARTTVQNLKVQAV 184
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
D ++ LILVKG +PGA S +L+R + K K
Sbjct: 185 DAEKNLILVKGAIPGA-NGSLVLIRTAVKKGAAAK 218
>gi|242237859|ref|YP_002986040.1| ribosomal protein L3 [Dickeya dadantii Ech703]
gi|242129916|gb|ACS84218.1| ribosomal protein L3 [Dickeya dadantii Ech703]
Length = 209
Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats.
Identities = 97/211 (45%), Positives = 134/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V +TL+ +GY AVQV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKTLENDGYRAVQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L EFR+ + +D VG S F + VDVTG + GKGF+
Sbjct: 61 NKPEAGHFAKAGVEAGRTLREFRLAEGED-FAVGQNISVEIFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA S ++V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209
>gi|311109612|ref|YP_003982465.1| 50S ribosomal protein L3 [Achromobacter xylosoxidans A8]
gi|310764301|gb|ADP19750.1| ribosomal protein L3 [Achromobacter xylosoxidans A8]
Length = 229
Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats.
Identities = 98/216 (45%), Positives = 129/216 (59%), Gaps = 3/216 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G+V RK+GMT ++ EG IPVTVL + N +V ++L+ +GY A+QV G + V
Sbjct: 12 RLGLVGRKVGMTRIFTEEGESIPVTVLDVSNNRVTQVKSLETDGYAAIQVAYGTRRASRV 71
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP--SYFTVGQLVDVTGMTIGKG 119
++P G ++ L EFR+ S F GQ VDVTG TIGKG
Sbjct: 72 AQPQTGHYAKAGAEAGSILKEFRLDPARAAEFAAGSVIAVESVFEAGQQVDVTGTTIGKG 131
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G +KRHNFG RA+HG S SHR GS G QDPGR+F K+MAG +G TV+NL+V
Sbjct: 132 FAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMAGHLGDVTRTVQNLDV 191
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
V VD +RGL+LVKG VPG + I+VR + K+
Sbjct: 192 VRVDVERGLLLVKGAVPG-HAGADIIVRPAIKAPAK 226
>gi|256025952|ref|ZP_05439817.1| 50S ribosomal protein L3 [Escherichia sp. 4_1_40B]
Length = 209
Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats.
Identities = 95/211 (45%), Positives = 133/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY A+QV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLTNDGYRAIQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRLAEGEE-FTVGQSISVELFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA S ++V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209
>gi|294789223|ref|ZP_06754462.1| 50S ribosomal protein L3 [Simonsiella muelleri ATCC 29453]
gi|294482964|gb|EFG30652.1| 50S ribosomal protein L3 [Simonsiella muelleri ATCC 29453]
Length = 215
Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats.
Identities = 103/214 (48%), Positives = 135/214 (63%), Gaps = 2/214 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ +G IPVTVL + +V ++ + +GY AVQV GE K
Sbjct: 1 MTLGLVGRKVGMTRIFTEQGESIPVTVLEMSTNRVTQVKSKETDGYTAVQVTFGEKKANR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP G F+ V + L EF V ++ L G+V + F GQLVDVTG + GKG
Sbjct: 61 VTKPEAGHFAKAGVEAGRGLHEFVVSEEKAAELKAGNVLTVELFQAGQLVDVTGTSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV++LE+
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKSTVQHLEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
V VD +R L+LVKG VPG+ NS ++V S K A
Sbjct: 181 VRVDVERNLLLVKGAVPGSV-NSDVVVCHSVKKA 213
>gi|218530394|ref|YP_002421210.1| 50S ribosomal protein L3 [Methylobacterium chloromethanicum CM4]
gi|254803680|sp|B7L0R1|RL3_METC4 RecName: Full=50S ribosomal protein L3
gi|218522697|gb|ACK83282.1| ribosomal protein L3 [Methylobacterium chloromethanicum CM4]
Length = 246
Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats.
Identities = 134/216 (62%), Positives = 160/216 (74%), Gaps = 2/216 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+ARK+GMT V+ G +PVTVL +D CQVV HRT +K+GY+A+QVG G+AKVKN
Sbjct: 1 MRSGVIARKVGMTRVFTDAGEHVPVTVLQIDQCQVVAHRTTEKDGYVALQVGVGKAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VS+ RG F+ V PKKKL EFRV + D L+PVG+ + +F GQ VDVTG + GKGF
Sbjct: 61 VSQAERGRFAVAKVEPKKKLAEFRVSE-DALIPVGAEITADHFIPGQFVDVTGTSTGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G +G RVT +NL+VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHLGVERVTTQNLKVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
D +RGLILV+G VPG WI VRDS K +
Sbjct: 180 RTDPERGLILVEGAVPGVA-GGWIQVRDSVKRKLPA 214
>gi|302388088|ref|YP_003823910.1| 50S ribosomal protein L3 [Clostridium saccharolyticum WM1]
gi|302198716|gb|ADL06287.1| 50S ribosomal protein L3 [Clostridium saccharolyticum WM1]
Length = 211
Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats.
Identities = 91/213 (42%), Positives = 128/213 (60%), Gaps = 3/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ G++A K+GMT ++N G PVTVL C V +T++ +GY AVQVG + + K
Sbjct: 1 MKKGILATKVGMTQIFNENGVLTPVTVLQAGPCVVTQVKTVENDGYSAVQVGYVDKREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VSKP++G F VS K+ + EF+++ D V F G +D T ++ GKGF
Sbjct: 61 VSKPIKGHFDKAGVSYKRYVREFKLENAD-QYSVKDEIKAEIFAAGDKIDATAISKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH HG S HR GS G DP +VFK KKM G+MG +VT++NLE+V
Sbjct: 120 QGAIKRHGQSRGPMAHG-SKFHRHAGSNGACSDPSKVFKGKKMPGQMGNKKVTIQNLEIV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD + LILVKG VPG KK S + ++++ K++
Sbjct: 179 RVDAENNLILVKGAVPGPKK-SLVTIKETVKAS 210
>gi|170738703|ref|YP_001767358.1| 50S ribosomal protein L3 [Methylobacterium sp. 4-46]
gi|226730536|sp|B0UHW9|RL3_METS4 RecName: Full=50S ribosomal protein L3
gi|168192977|gb|ACA14924.1| ribosomal protein L3 [Methylobacterium sp. 4-46]
Length = 246
Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats.
Identities = 133/220 (60%), Positives = 162/220 (73%), Gaps = 2/220 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT V+ G +PVTVL +D CQVV HRT++KNGY+A+QVG G+AKVKN
Sbjct: 1 MRSGVIAQKVGMTRVFTDAGEHVPVTVLKVDQCQVVAHRTVEKNGYVALQVGVGKAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VSK RG F+ V PK+KL EFRV + D L+PVG+ + +F GQ VDVTG T GKGF
Sbjct: 61 VSKAERGRFAIAKVEPKRKLAEFRVTE-DALIPVGAEITADHFIPGQFVDVTGTTTGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G +G RVT +NL VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHLGVERVTTQNLRVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
D +RGLILV+G VPG WI +RD+ K + + +
Sbjct: 180 RTDPERGLILVEGAVPGVA-GGWIQIRDAVKRKLPAEAPM 218
>gi|251787971|ref|YP_003002692.1| 50S ribosomal protein L3 [Dickeya zeae Ech1591]
gi|247536592|gb|ACT05213.1| ribosomal protein L3 [Dickeya zeae Ech1591]
Length = 209
Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats.
Identities = 99/211 (46%), Positives = 134/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ EG IPVTV+ ++ +V +TL+ +GY AVQV AG K V
Sbjct: 1 MIGLVGKKVGMTRIFTEEGVSIPVTVIEIEANRVTQVKTLENDGYRAVQVTAGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L EFR+ D + VG S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRVLREFRL-ADSEEFAVGQDISVEIFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA S ++V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209
>gi|291547982|emb|CBL21090.1| 50S ribosomal protein L3, bacterial [Ruminococcus sp. SR1/5]
Length = 210
Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats.
Identities = 91/212 (42%), Positives = 123/212 (58%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++A K+GMT ++N +G IPVTVL C V +T + +GY +VQVG GE + K
Sbjct: 1 MKKAILATKVGMTQIFNEDGMLIPVTVLQAGPCVVTQVKTEENDGYTSVQVGFGEIREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP +G F V+ K+ + EFR VG F G +D T ++ GKGF
Sbjct: 61 VNKPEKGHFDKAGVAVKRFVKEFRFDN-AGEYEVGQEIKADIFAAGDHIDATAVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH HG S HR GS G DP +VFK K M G MG +VTV+NLE+V
Sbjct: 120 QGAIKRHGQSRGPMAHG-SKYHRHAGSNGACSDPSKVFKGKHMPGHMGHVQVTVQNLEIV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + L+LVKG VPG KK S + ++++ KS
Sbjct: 179 RVDTENNLLLVKGAVPGPKK-SLVTIKETVKS 209
>gi|268609593|ref|ZP_06143320.1| 50S ribosomal protein L3 [Ruminococcus flavefaciens FD-1]
Length = 210
Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats.
Identities = 89/212 (41%), Positives = 134/212 (63%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ G++ +K+GMT +++ G+ +PVTV+ C VV +T++ +GY A+Q+G G+ KV+
Sbjct: 1 MQKGIIGKKIGMTQIFDEAGKVVPVTVVEAGPCVVVQKKTVENDGYAALQLGYGDVKVQR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KPM+G F +V+ KK L EFR++ D L VG + F VG +DV G + GKG+
Sbjct: 61 MNKPMKGHFDKADVACKKTLKEFRLEDCDA-LNVGDIVKADTFAVGDAIDVVGTSKGKGY 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KRHN L+ THG HR GS G P R++K K MAG MG +VTV+NLE+V
Sbjct: 120 AGPIKRHNQHRLKETHGTGPVHRQAGSMGACSSPSRIYKGKGMAGHMGAEQVTVQNLEIV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+D + LI +KG +PG K + + DS K+
Sbjct: 180 KIDVENNLIAIKGAIPGP-KGGIVYIVDSVKA 210
>gi|320160414|ref|YP_004173638.1| 50S ribosomal protein L3 [Anaerolinea thermophila UNI-1]
gi|319994267|dbj|BAJ63038.1| 50S ribosomal protein L3 [Anaerolinea thermophila UNI-1]
Length = 209
Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats.
Identities = 86/211 (40%), Positives = 123/211 (58%), Gaps = 3/211 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT +++ G IPVTV+ C V RT + +GY AVQ+G E K K
Sbjct: 1 MLKGLIGKKIGMTQIFDENGVAIPVTVIEAGPCYVTQVRTPENDGYSAVQLGFEEVKPKR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++ G N+ P + L EFRV+ + + G + F VG+ VDV G + GKGF
Sbjct: 61 LTGGELGHLKRNNLPPLRFLREFRVKNPE--VKEGDKVTVECFAVGERVDVVGTSKGKGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR++F G THG S HR+ GS PGRV+K + G MG +RVT + L+VV
Sbjct: 119 QGGVKRYHFRGGPKTHGQSDRHRAPGSRSSGTTPGRVYKGSRGPGHMGNDRVTAQGLKVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
VD +R LI VKG VPGA K ++++++ K
Sbjct: 179 LVDTERNLIGVKGSVPGA-KGGLVVIKEARK 208
>gi|209964040|ref|YP_002296955.1| ribosomal protein L3 [Rhodospirillum centenum SW]
gi|226730556|sp|B6IRQ6|RL3_RHOCS RecName: Full=50S ribosomal protein L3
gi|209957506|gb|ACI98142.1| ribosomal protein L3 [Rhodospirillum centenum SW]
Length = 235
Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats.
Identities = 131/219 (59%), Positives = 162/219 (73%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSG++A+KLGMT V+ EG +PVTVL LD QVV RT D++GY A+Q+GAG+AKVKN
Sbjct: 1 MRSGLIAQKLGMTRVFTDEGEHVPVTVLKLDQVQVVAQRTEDRDGYTALQLGAGKAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+K R F+ V PKKKL EFRV D L+ VG+ + +F GQ VDVTG TIG+GF
Sbjct: 61 VAKAQREQFARAKVEPKKKLVEFRVTP-DALIEVGAEITADHFVPGQFVDVTGTTIGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G M+R NFGGLRATHGVS+SHRSHGSTG RQDPG+ FKNKKMAG G +VTV+NL+VV
Sbjct: 120 TGPMRRWNFGGLRATHGVSVSHRSHGSTGGRQDPGKTFKNKKMAGHYGVEKVTVQNLKVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
VD +RGLILVKG +PG + W+L+RD+ K +
Sbjct: 180 QVDVERGLILVKGAIPG-HEGGWVLIRDAVKKKLPDGAP 217
>gi|163851585|ref|YP_001639628.1| 50S ribosomal protein L3 [Methylobacterium extorquens PA1]
gi|240138753|ref|YP_002963225.1| 50S ribosomal subunit protein L3 [Methylobacterium extorquens AM1]
gi|254561353|ref|YP_003068448.1| 50S ribosomal subunit protein L3 [Methylobacterium extorquens DM4]
gi|226730532|sp|A9W4Q1|RL3_METEP RecName: Full=50S ribosomal protein L3
gi|163663190|gb|ABY30557.1| ribosomal protein L3 [Methylobacterium extorquens PA1]
gi|240008722|gb|ACS39948.1| 50S ribosomal subunit protein L3 [Methylobacterium extorquens AM1]
gi|254268631|emb|CAX24590.1| 50S ribosomal subunit protein L3 [Methylobacterium extorquens DM4]
Length = 246
Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats.
Identities = 134/216 (62%), Positives = 160/216 (74%), Gaps = 2/216 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+ARK+GMT V+ G +PVTVL +D CQVV HRT +K+GY+A+QVG G+AKVKN
Sbjct: 1 MRSGVIARKVGMTRVFTDAGEHVPVTVLQIDQCQVVAHRTTEKDGYVALQVGVGKAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VS+ RG F+ V PKKKL EFRV + D L+PVG+ + +F GQ VDVTG + GKGF
Sbjct: 61 VSQAERGRFAVAKVEPKKKLAEFRVSE-DALIPVGAEITADHFIPGQFVDVTGTSTGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G +G RVT +NL+VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHLGVERVTTQNLKVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
D +RGLILV+G VPG WI VRDS K +
Sbjct: 180 RTDPERGLILVEGAVPGVA-GGWIQVRDSVKRKLPA 214
>gi|317401537|gb|EFV82166.1| 50S ribosomal protein L3 [Achromobacter xylosoxidans C54]
Length = 229
Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats.
Identities = 97/216 (44%), Positives = 127/216 (58%), Gaps = 3/216 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G+V RK+GMT ++ EG IPVTVL + N +V ++L+ +GY A+QV G + V
Sbjct: 12 RLGLVGRKVGMTRIFTEEGESIPVTVLDVSNNRVTQVKSLETDGYAAIQVAYGTRRASRV 71
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP--SYFTVGQLVDVTGMTIGKG 119
+ G ++ L EFR+ S F GQ VDVTG TIGKG
Sbjct: 72 PQAQTGHYAKAGAEAGSILKEFRLDPARAAEFSAGAVIAVESVFEAGQQVDVTGTTIGKG 131
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G +KRHNFG RA+HG S SHR GS G QDPGR+F K+MAG +G TV+NL+V
Sbjct: 132 FAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMAGHLGDVTRTVQNLDV 191
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
V VD +RGL+LVKG VPG + I+VR + K+
Sbjct: 192 VRVDVERGLLLVKGAVPG-HAGADIVVRPAIKAPAK 226
>gi|291619176|ref|YP_003521918.1| RplC [Pantoea ananatis LMG 20103]
gi|291154206|gb|ADD78790.1| RplC [Pantoea ananatis LMG 20103]
gi|327395506|dbj|BAK12928.1| 50S ribosomal protein L3 RplC [Pantoea ananatis AJ13355]
Length = 209
Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats.
Identities = 95/211 (45%), Positives = 133/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V + L+ +GY A+QV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKGLENDGYQAIQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR + D+ VG S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRTVEGDE-YAVGQSISVEIFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA S ++V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209
>gi|293393311|ref|ZP_06637625.1| 50S ribosomal protein L3 [Serratia odorifera DSM 4582]
gi|291424221|gb|EFE97436.1| 50S ribosomal protein L3 [Serratia odorifera DSM 4582]
Length = 209
Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats.
Identities = 94/211 (44%), Positives = 131/211 (62%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V + LD +GY A+QV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLDNDGYRAIQVTTGSKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR+++ + G S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRLEEGQE-FAAGQEISVEIFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG +G RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHLGDERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA + I V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGATGGNLI-VKPAVKA 209
>gi|225016285|ref|ZP_03705477.1| hypothetical protein CLOSTMETH_00188 [Clostridium methylpentosum
DSM 5476]
gi|224950960|gb|EEG32169.1| hypothetical protein CLOSTMETH_00188 [Clostridium methylpentosum
DSM 5476]
Length = 211
Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats.
Identities = 84/213 (39%), Positives = 126/213 (59%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++ +K+GMT +++ G+ IPVTV+ C VV +T++ +GY AVQVG + K
Sbjct: 1 MKKAIIGKKVGMTQIFDENGKVIPVTVVEAGPCVVVQKKTVENDGYEAVQVGFSDLKPHK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP G F+ + +PK+ L EFR+ +D L +G + F G +VDV G + GKGF
Sbjct: 61 VNKPTAGHFAKADAAPKRHLKEFRL-EDCASLNLGDLIKADVFAEGDIVDVCGTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR+ L+A+HG R GS G DP R+ K KKM G+MG VT++NL VV
Sbjct: 120 AGTIKRYGNASLKASHGTGPVGRHAGSMGAASDPSRIPKGKKMPGQMGNETVTIQNLTVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD + LI ++G +PG + + +S K A
Sbjct: 180 KVDAENNLIALRGAIPGP-NGGIVTIANSVKKA 211
>gi|33152958|ref|NP_874311.1| 50S ribosomal protein L3 [Haemophilus ducreyi 35000HP]
gi|42559602|sp|Q7VKD2|RL3_HAEDU RecName: Full=50S ribosomal protein L3
gi|33149183|gb|AAP96700.1| 50S ribosomal protein L3 [Haemophilus ducreyi 35000HP]
Length = 208
Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats.
Identities = 98/211 (46%), Positives = 134/211 (63%), Gaps = 3/211 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT V+N +G IPVTV+ ++ +V +TL+ +GY A+QV G K V
Sbjct: 1 MIGLIGRKVGMTRVFNEDGVSIPVTVIEIEANRVTQVKTLENDGYSAIQVTTGTKKASRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F V + L+EFR + ++ +G + F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFADVKKVDVTGTSKGKGFA 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV
Sbjct: 119 GGVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVR 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA NS ++V+ + K+
Sbjct: 179 VDAERKLLLVKGAVPGA-TNSNVIVKPAVKA 208
>gi|266620263|ref|ZP_06113198.1| 50S ribosomal protein L3 [Clostridium hathewayi DSM 13479]
gi|288868166|gb|EFD00465.1| 50S ribosomal protein L3 [Clostridium hathewayi DSM 13479]
Length = 211
Score = 221 bits (562), Expect = 7e-56, Method: Composition-based stats.
Identities = 93/214 (43%), Positives = 128/214 (59%), Gaps = 3/214 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ G++A K+GMT ++N +G PVTVL C V +T + +GY AVQVG + + K
Sbjct: 1 MKKGILATKVGMTQIFNEDGVLTPVTVLLAGPCVVTQVKTAENDGYDAVQVGFVDKRAKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VSKP++G F VS K+ + EF+ ++ V F G +D T ++ GKGF
Sbjct: 61 VSKPVKGHFDKAGVSYKRYVREFK-FENASEYSVKDEIKADIFAAGDKIDATAISKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH HG S HR GS G DP +VFK KKM G+MG RVT++NLE+V
Sbjct: 120 QGAIKRHGQSRGPMAHG-SKFHRHAGSNGSCSDPSKVFKGKKMPGQMGNKRVTIQNLEIV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VD + LILVKG VPG KK S + ++++ K+AV
Sbjct: 179 KVDAENNLILVKGAVPGPKK-SLVTIKETVKAAV 211
>gi|188581375|ref|YP_001924820.1| 50S ribosomal protein L3 [Methylobacterium populi BJ001]
gi|226730534|sp|B1ZLK4|RL3_METPB RecName: Full=50S ribosomal protein L3
gi|179344873|gb|ACB80285.1| ribosomal protein L3 [Methylobacterium populi BJ001]
Length = 246
Score = 221 bits (562), Expect = 7e-56, Method: Composition-based stats.
Identities = 135/216 (62%), Positives = 160/216 (74%), Gaps = 2/216 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+ARK+GMT V+ G +PVTVL +D CQVV HRT +K+GY+A+QVG G+AKVKN
Sbjct: 1 MRSGVIARKVGMTRVFTDAGEHVPVTVLQIDQCQVVAHRTTEKDGYVALQVGVGKAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VS+ RG F+ V PKKKL EFRV + D L+PVG+ + +F GQ VDVTG T GKGF
Sbjct: 61 VSQAERGRFAVAKVEPKKKLAEFRVSE-DALIPVGAEITADHFIPGQFVDVTGTTTGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G +G RVT +NL+VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHLGVERVTTQNLKVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
D +RGLILV+G VPG WI VRDS K +
Sbjct: 180 RTDPERGLILVEGAVPGVA-GGWIQVRDSVKRKLPA 214
>gi|49475794|ref|YP_033835.1| 50S ribosomal protein L3 [Bartonella henselae str. Houston-1]
gi|81827700|sp|Q6G2W5|RL3_BARHE RecName: Full=50S ribosomal protein L3
gi|49238601|emb|CAF27842.1| 50S ribosomal protein l3 [Bartonella henselae str. Houston-1]
Length = 246
Score = 221 bits (562), Expect = 7e-56, Method: Composition-based stats.
Identities = 133/219 (60%), Positives = 164/219 (74%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+KLGMT +YN G +PVTVL L+NCQVV RT++KNGY AVQ+G G AKVKN
Sbjct: 1 MRSGVIAQKLGMTRIYNDAGEHVPVTVLRLENCQVVAQRTVEKNGYTAVQLGVGFAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
S+ +RG F+ +V PK K+ EFRV D+LL +G+ + +F GQ VDVTG TIGKGF
Sbjct: 61 TSQALRGHFAKASVEPKAKIAEFRVSP-DNLLDIGTEITAEHFVPGQRVDVTGTTIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKRHNFGG RA+HG SI+HR+HGSTG QDPG+VFK KKMAG MG RVT +N+EVV
Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGQVRVTTQNIEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
S D +RGLILV+G V G+ K +WILVRD+ K +
Sbjct: 180 STDVERGLILVRGAVSGS-KGAWILVRDAIKKPLPDNAP 217
>gi|317494342|ref|ZP_07952756.1| 50S ribosomal protein L3 [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316917592|gb|EFV38937.1| 50S ribosomal protein L3 [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 209
Score = 221 bits (562), Expect = 7e-56, Method: Composition-based stats.
Identities = 98/211 (46%), Positives = 132/211 (62%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V +TLD +GY AVQV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKTLDNDGYCAVQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SKP G F+ V + L EFR+ + ++ VG S F + VDVTG + GKGF+
Sbjct: 61 SKPEAGHFAKAGVEAGRTLREFRLNEGEE-FTVGQSISVEIFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA I V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGATGGDLI-VKPAVKA 209
>gi|154245623|ref|YP_001416581.1| 50S ribosomal protein L3 [Xanthobacter autotrophicus Py2]
gi|226730590|sp|A7IFY1|RL3_XANP2 RecName: Full=50S ribosomal protein L3
gi|154159708|gb|ABS66924.1| ribosomal protein L3 [Xanthobacter autotrophicus Py2]
Length = 241
Score = 221 bits (562), Expect = 7e-56, Method: Composition-based stats.
Identities = 132/219 (60%), Positives = 161/219 (73%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT ++ G +PVTVL +++CQVV HRTLDKNGY+AVQ+GAG K KN
Sbjct: 1 MRSGVIAQKVGMTRIFTDAGEHVPVTVLKVESCQVVAHRTLDKNGYVAVQLGAGRRKPKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V++ RG F+ V PK KL EFRV ++ L+PVG+ + +F VGQ VDVTG TIGKGF
Sbjct: 61 VTRAERGHFAVAQVEPKHKLAEFRV-PEEALIPVGAEITADHFVVGQYVDVTGTTIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKRHNFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G MG VT +NL+VV
Sbjct: 120 AGGMKRHNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHMGDVTVTTQNLKVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
D +RGLI V+G VPG WI VRD+ K + +
Sbjct: 180 MTDVERGLIAVEGAVPG-HAGGWITVRDAVKKKLPAEAP 217
>gi|300933010|ref|ZP_07148266.1| 50S ribosomal protein L3 [Corynebacterium resistens DSM 45100]
Length = 218
Score = 221 bits (562), Expect = 7e-56, Method: Composition-based stats.
Identities = 90/214 (42%), Positives = 128/214 (59%), Gaps = 2/214 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ +KLGMT +++ E R +PVTV+ C V RT + +GY AVQ+ GE + V+
Sbjct: 7 KGILGKKLGMTQIFDDENRVVPVTVVEAGPCVVTQVRTKETDGYEAVQIAFGEIDPRKVN 66
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP G F V+P++ + E RV +D VG + F + VDVTG+T G G++G
Sbjct: 67 KPAAGHFKKAGVTPRRHVTEIRV-EDASAYEVGQDVTVEIFNDVKFVDVTGITKGHGYAG 125
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
AMKRH F G A+HG +HR G G PGR+FK K+MAGRMG +RVT++NL+V V
Sbjct: 126 AMKRHGFAGQGASHGNQAAHRRVGGIGACATPGRIFKGKRMAGRMGSDRVTLQNLKVAKV 185
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
D + L+LVKG VPG ++V+ + K +
Sbjct: 186 DAESNLLLVKGAVPG-NNGGIVVVKTAVKGGAHA 218
>gi|114561336|ref|YP_748849.1| 50S ribosomal protein L3 [Shewanella frigidimarina NCIMB 400]
gi|122301115|sp|Q089Q4|RL3_SHEFN RecName: Full=50S ribosomal protein L3
gi|114332629|gb|ABI70011.1| LSU ribosomal protein L3P [Shewanella frigidimarina NCIMB 400]
Length = 212
Score = 221 bits (562), Expect = 7e-56, Method: Composition-based stats.
Identities = 89/213 (41%), Positives = 128/213 (60%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT ++ +G IPVTV+ + +V +TL+ +GY A+QV G K
Sbjct: 1 MAIGLIGRKVGMTRIFTEDGTSIPVTVIEIAGNRVTQVKTLETDGYRALQVTTGTKKANR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
++K G F+ V + L+E R+ + + + VG+ + F VDVTG + GKG
Sbjct: 61 ITKAEAGHFAKGGVEAGRGLWEMRLADGEGEGIEVGAEINVDIFADTVKVDVTGQSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KR NF THG S++HRS+GS G Q PGRVFK KKM+G MG +VT +NL V
Sbjct: 121 FQGGVKRWNFRTQDMTHGNSLAHRSNGSIGQNQTPGRVFKGKKMSGHMGAEQVTTQNLHV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD +R L+LV+G VPGA I ++ + K+
Sbjct: 181 VRVDAERNLLLVRGAVPGATNGDLI-IKPAVKA 212
>gi|121997649|ref|YP_001002436.1| ribosomal protein L3 [Halorhodospira halophila SL1]
gi|166233149|sp|A1WVC2|RL3_HALHL RecName: Full=50S ribosomal protein L3
gi|121589054|gb|ABM61634.1| LSU ribosomal protein L3P [Halorhodospira halophila SL1]
Length = 216
Score = 221 bits (562), Expect = 7e-56, Method: Composition-based stats.
Identities = 103/217 (47%), Positives = 134/217 (61%), Gaps = 6/217 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK GMT V+ EG IPVTV+ D +V +T + +GY AVQV AG K +
Sbjct: 1 MAIGIVGRKRGMTRVFTEEGGSIPVTVVEADPNRVTQVKTEESDGYRAVQVTAGRRKPQR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQK-----DDDLLPVGSVFSPSYFTVGQLVDVTGMT 115
V KP G F+ V + ++EFR+ K D+++ G F GQ VDVTG T
Sbjct: 61 VRKPEAGHFARAGVEAGRGVWEFRLDKGQRASDEEMPETGGSIDVGGFEAGQKVDVTGTT 120
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
G+GF+G ++RHNF R THG S SHR GS G Q PGRVFK KKMAG+MG R T++
Sbjct: 121 KGRGFAGTVRRHNFRAQRNTHGNSKSHRVPGSIGQCQSPGRVFKGKKMAGQMGNRRATIQ 180
Query: 176 NLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
NLEVV VD +R L+L++G VPGA S ++VR + K+
Sbjct: 181 NLEVVRVDSERNLLLIRGAVPGAV-GSDLIVRPASKA 216
>gi|94312248|ref|YP_585458.1| 50S ribosomal protein L3 [Cupriavidus metallidurans CH34]
gi|122987810|sp|Q1LI37|RL3_RALME RecName: Full=50S ribosomal protein L3
gi|93356100|gb|ABF10189.1| 50S ribosomal subunit protein L3 [Cupriavidus metallidurans CH34]
Length = 214
Score = 221 bits (562), Expect = 7e-56, Method: Composition-based stats.
Identities = 90/214 (42%), Positives = 129/214 (60%), Gaps = 2/214 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ +G IPVTV+ + + +V +T + +GY AVQV G +
Sbjct: 1 MSLGLVGRKVGMTRIFTDDGDSIPVTVVEVGDNRVTQIKTDETDGYTAVQVTFGSRRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP+ G + V + + EFR+ L GS S F VGQ +DV G++IGKG
Sbjct: 61 VTKPLAGHLAKAGVEAGEVIKEFRIDAAKAAELQAGSSLSVDLFQVGQKIDVQGVSIGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KRH+F RATHG S SH GS G QDPGRVF K+M G +G TV+NLE+
Sbjct: 121 YAGTIKRHHFASGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDATRTVQNLEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+D +R L+LVKG +PG+ K ++V + K+
Sbjct: 181 AKIDAERKLLLVKGAIPGS-KGGKVIVTPAVKAK 213
>gi|32035713|ref|ZP_00135594.1| COG0087: Ribosomal protein L3 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|126209224|ref|YP_001054449.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae L20]
gi|165977196|ref|YP_001652789.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
gi|190151114|ref|YP_001969639.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|303250012|ref|ZP_07336214.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|303253186|ref|ZP_07339335.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 2
str. 4226]
gi|307246689|ref|ZP_07528759.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 1
str. 4074]
gi|307248831|ref|ZP_07530844.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 2
str. S1536]
gi|307251058|ref|ZP_07532982.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 4
str. M62]
gi|307253444|ref|ZP_07535315.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|307255674|ref|ZP_07537478.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 9
str. CVJ13261]
gi|307257857|ref|ZP_07539614.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|307260126|ref|ZP_07541836.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|307262255|ref|ZP_07543904.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|307264464|ref|ZP_07546049.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|166233111|sp|A3N358|RL3_ACTP2 RecName: Full=50S ribosomal protein L3
gi|226725121|sp|B3GZ11|RL3_ACTP7 RecName: Full=50S ribosomal protein L3
gi|226725122|sp|B0BST1|RL3_ACTPJ RecName: Full=50S ribosomal protein L3
gi|126098016|gb|ABN74844.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar
5b str. L20]
gi|165877297|gb|ABY70345.1| ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
gi|189916245|gb|ACE62497.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|302647868|gb|EFL78075.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 2
str. 4226]
gi|302651075|gb|EFL81229.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|306852389|gb|EFM84624.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 1
str. 4074]
gi|306854758|gb|EFM86948.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 2
str. S1536]
gi|306856888|gb|EFM89020.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 4
str. M62]
gi|306859123|gb|EFM91165.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|306861351|gb|EFM93341.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar 9
str. CVJ13261]
gi|306863763|gb|EFM95689.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|306865772|gb|EFM97650.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|306868018|gb|EFM99845.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|306870161|gb|EFN01920.1| 50S ribosomal protein L3 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
Length = 208
Score = 221 bits (562), Expect = 7e-56, Method: Composition-based stats.
Identities = 99/211 (46%), Positives = 133/211 (63%), Gaps = 3/211 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V RK+GMT V+ +G IPVTV+ ++ +V +TL+ +GY A+QV G K V
Sbjct: 1 MIGLVGRKVGMTRVFTEDGVSIPVTVIEIEANRVTQVKTLENDGYSAIQVTTGSKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F V + L+EFR + ++ +G + FT + VDVTG + GKGF
Sbjct: 61 TKPEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFTDVKKVDVTGTSKGKGFQ 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV
Sbjct: 119 GGVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVR 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA NS ++V+ + K+
Sbjct: 179 VDAERKLLLVKGAVPGA-TNSDVIVKPAVKA 208
>gi|253991688|ref|YP_003043044.1| 50S ribosomal protein L3 [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253783138|emb|CAQ86303.1| 50s ribosomal protein l3 [Photorhabdus asymbiotica]
Length = 209
Score = 221 bits (562), Expect = 7e-56, Method: Composition-based stats.
Identities = 94/211 (44%), Positives = 134/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++N +V + L+ +GY A+QV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEIENNRVTQVKDLNNDGYRAIQVTTGSKKASRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L EFR+ + ++ VG S F + VDVTG + GKGF+
Sbjct: 61 NKPEAGHFAKAGVEAGRILREFRLSEGEE-YAVGQSISVEIFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF A+HG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDASHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA S ++V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGA-TGSNLIVKPAVKA 209
>gi|298291438|ref|YP_003693377.1| 50S ribosomal protein L3 [Starkeya novella DSM 506]
gi|296927949|gb|ADH88758.1| 50S ribosomal protein L3 [Starkeya novella DSM 506]
Length = 251
Score = 221 bits (562), Expect = 7e-56, Method: Composition-based stats.
Identities = 129/219 (58%), Positives = 165/219 (75%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT ++N G +PVTVL +DNCQVV HRT++KNGY AVQ+G G+AK +N
Sbjct: 1 MRSGVIAQKVGMTRIFNDAGEHVPVTVLKVDNCQVVAHRTVEKNGYTAVQLGVGQAKPQN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++ +RG F+ V PK+K+ EFRV++ D L+PVG+ + +F VGQ VDVTG +IGKGF
Sbjct: 61 TTRALRGHFAVAKVEPKRKMAEFRVEESD-LIPVGAELTVDHFVVGQFVDVTGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKRHNFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G +G VT +NL+VV
Sbjct: 120 AGGMKRHNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHLGAETVTTQNLKVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
D +RGLI V+G VPG K WI+V D+ K + +
Sbjct: 180 LTDVERGLIAVEGAVPG-NKGGWIIVADAVKKKLPAEAP 217
>gi|52426103|ref|YP_089240.1| 50S ribosomal protein L3 [Mannheimia succiniciproducens MBEL55E]
gi|81825476|sp|Q65QV5|RL3_MANSM RecName: Full=50S ribosomal protein L3
gi|52308155|gb|AAU38655.1| RplC protein [Mannheimia succiniciproducens MBEL55E]
Length = 208
Score = 221 bits (562), Expect = 7e-56, Method: Composition-based stats.
Identities = 99/211 (46%), Positives = 132/211 (62%), Gaps = 3/211 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V RK+GMT ++ EG IPVTV+ ++ +V +TL+ +GY AVQV G K V
Sbjct: 1 MIGLVGRKVGMTRIFTEEGVSIPVTVIEIEANRVTQVKTLENDGYSAVQVTTGSKKASRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F V + L+EFR + ++ +G + F + VDVTG + GKGF
Sbjct: 61 TKPEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFADVKKVDVTGTSKGKGFQ 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV
Sbjct: 119 GGVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVR 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA NS ++V+ + K+
Sbjct: 179 VDAERKLLLVKGAVPGA-TNSDVIVKPAVKA 208
>gi|152978141|ref|YP_001343770.1| 50S ribosomal protein L3 [Actinobacillus succinogenes 130Z]
gi|171472958|sp|A6VLI8|RL3_ACTSZ RecName: Full=50S ribosomal protein L3
gi|150839864|gb|ABR73835.1| ribosomal protein L3 [Actinobacillus succinogenes 130Z]
Length = 208
Score = 221 bits (562), Expect = 7e-56, Method: Composition-based stats.
Identities = 99/211 (46%), Positives = 132/211 (62%), Gaps = 3/211 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V RK+GMT V+ +G IPVTV+ ++ +V +TL+ +GY AVQV G K V
Sbjct: 1 MIGLVGRKVGMTRVFTEDGVSIPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKASRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F V + L+EFR + ++ +G + F + VDVTG + GKGF
Sbjct: 61 TKPEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFADVKKVDVTGTSKGKGFQ 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV
Sbjct: 119 GGVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVR 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA NS ++V+ + K+
Sbjct: 179 VDAERKLLLVKGAVPGA-TNSDVIVKPAVKA 208
>gi|255263954|ref|ZP_05343296.1| 50S ribosomal protein L3 [Thalassiobium sp. R2A62]
gi|255106289|gb|EET48963.1| 50S ribosomal protein L3 [Thalassiobium sp. R2A62]
Length = 292
Score = 221 bits (562), Expect = 7e-56, Method: Composition-based stats.
Identities = 125/215 (58%), Positives = 163/215 (75%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
+RSG++A+K+GMT ++ +G++IPVTVL LD QVV RT + +GY AVQ+GAG AKVK
Sbjct: 2 LRSGIIAKKVGMTRIFQEDGKQIPVTVLQLDKLQVVAQRTQETDGYTAVQLGAGTAKVKR 61
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VS+ MRG F++ V PK+++ EFRV ++L+ VG + +++ GQ VDV+G +IGKGF
Sbjct: 62 VSQAMRGHFAAAKVEPKRRVAEFRV-AAENLINVGEEITANHYFEGQFVDVSGTSIGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GAMKRHNFGGLRATHGVSISHRSHGSTG QDPG+VFK KKMAG MG +VT +NL+VV
Sbjct: 121 QGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAAKVTTQNLQVV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D RGLI+VKG VPG+ K W+ V+D+ K +
Sbjct: 181 KTDAGRGLIMVKGAVPGS-KGGWVTVKDAVKKPIP 214
>gi|315122818|ref|YP_004063307.1| 50S ribosomal protein L3 [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313496220|gb|ADR52819.1| 50S ribosomal protein L3 [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 221
Score = 221 bits (562), Expect = 7e-56, Method: Composition-based stats.
Identities = 188/221 (85%), Positives = 206/221 (93%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR GVVARKLGMTCVYN+EG+R+PVTVLHLDNCQVV HRTL KNGYMAVQVGAG+AK+KN
Sbjct: 1 MRPGVVARKLGMTCVYNLEGKRLPVTVLHLDNCQVVAHRTLQKNGYMAVQVGAGDAKIKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VSKPMRGFFSSVN SPKK+L EFRVQK+D+LL +GSV SPS+F VGQLVDVTG+TIGKGF
Sbjct: 61 VSKPMRGFFSSVNASPKKRLSEFRVQKEDELLQIGSVLSPSHFNVGQLVDVTGVTIGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRHNF GLRA+HGVSISHRS GSTGCRQDPGRVFKNKKMAG MGGNR+TVKNLEV+
Sbjct: 121 AGAMKRHNFAGLRASHGVSISHRSAGSTGCRQDPGRVFKNKKMAGHMGGNRITVKNLEVI 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
S+DDKRGLI VKGCVPGAK +SWILVRDSFKSA N KGKV+
Sbjct: 181 SIDDKRGLIFVKGCVPGAKNDSWILVRDSFKSAANYKGKVA 221
>gi|224827017|ref|ZP_03700114.1| ribosomal protein L3 [Lutiella nitroferrum 2002]
gi|224600683|gb|EEG06869.1| ribosomal protein L3 [Lutiella nitroferrum 2002]
Length = 214
Score = 221 bits (562), Expect = 7e-56, Method: Composition-based stats.
Identities = 96/213 (45%), Positives = 126/213 (59%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ +G IPVTVL + +V +T + +GY A+QV G K
Sbjct: 1 MSLGLVGRKVGMTRIFAEDGASIPVTVLDMAANRVTQIKTAEVDGYEAIQVTYGSCKANR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+K G F+ V + L EF + + G + F VGQLVDVTG + GKG
Sbjct: 61 VNKAEAGHFAKAGVEAGRGLGEFVLNAEQLSQFKPGDAITVEIFQVGQLVDVTGTSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
FSG +KRHNF RA+HG S SH + GS G QDPGRV K+MAG+ G + TV+ LE+
Sbjct: 121 FSGVIKRHNFSSNRASHGNSRSHNTPGSIGQAQDPGRVLPGKRMAGQYGNVQSTVQRLEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V +D +R LILVKG VPGA + VR S K+
Sbjct: 181 VRIDTERQLILVKGAVPGATNGDVV-VRPSVKA 212
>gi|284006163|emb|CBA71405.1| 50S ribosomal protein L3 [Arsenophonus nasoniae]
Length = 209
Score = 221 bits (562), Expect = 7e-56, Method: Composition-based stats.
Identities = 95/211 (45%), Positives = 135/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++N +V ++L+ +GY A+QV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEIENNRVTQVKSLETDGYNAIQVTTGSKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
KP G F+ V + L EFR+ ++++ VG S F + VDVTG + GKGF+
Sbjct: 61 KKPEAGHFAKAGVEAGRILREFRLSENEE-FTVGQSISVEIFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA S ++V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGA-TGSNLIVKPAVKA 209
>gi|237653996|ref|YP_002890310.1| 50S ribosomal protein L3 [Thauera sp. MZ1T]
gi|237625243|gb|ACR01933.1| ribosomal protein L3 [Thauera sp. MZ1T]
Length = 212
Score = 221 bits (562), Expect = 8e-56, Method: Composition-based stats.
Identities = 100/213 (46%), Positives = 138/213 (64%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ +G+ IPVTVL + + +V +T+D +GY AVQ+ G+ +
Sbjct: 1 MSLGLVGRKVGMTRIFAEDGKTIPVTVLDVSDNRVSQIKTIDTDGYAAVQIAYGKRRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDD-LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
++KP+ G + V P + + EFRV+ + + G F VGQ VDVTG+TIGKG
Sbjct: 61 ITKPVAGHLAKAGVEPCRGIKEFRVEAEQAGSMNAGDAVGADLFQVGQKVDVTGVTIGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
FSG +KRHNF RA+HG SISH S GS G QDPGRVF K+MAG+ G + T + LE+
Sbjct: 121 FSGPIKRHNFSSNRASHGNSISHNSPGSIGMAQDPGRVFPGKRMAGQYGNVQRTTQGLEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD +R L+LVKG VPGA K ++VR + K+
Sbjct: 181 VRVDVERQLLLVKGAVPGA-KGGDVVVRPAVKA 212
>gi|271502246|ref|YP_003335272.1| 50S ribosomal protein L3 [Dickeya dadantii Ech586]
gi|270345801|gb|ACZ78566.1| 50S ribosomal protein L3 [Dickeya dadantii Ech586]
Length = 209
Score = 221 bits (562), Expect = 8e-56, Method: Composition-based stats.
Identities = 98/211 (46%), Positives = 133/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ EG IPVTV+ ++ +V +TL+ +GY AVQV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEEGVSIPVTVIEIEANRVTQVKTLENDGYRAVQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L EFR+ D + VG S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRVLREFRL-ADSEEFAVGQDISVEVFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA S ++V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209
>gi|71905961|ref|YP_283548.1| 50S ribosomal protein L3 [Dechloromonas aromatica RCB]
gi|109893424|sp|Q47JA3|RL3_DECAR RecName: Full=50S ribosomal protein L3
gi|71845582|gb|AAZ45078.1| LSU ribosomal protein L3P [Dechloromonas aromatica RCB]
Length = 212
Score = 221 bits (562), Expect = 8e-56, Method: Composition-based stats.
Identities = 96/213 (45%), Positives = 132/213 (61%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ +G IPVTVL + N +V +T + +GY A+QV G+ +
Sbjct: 1 MSLGLVGRKVGMTRIFAEDGASIPVTVLDVSNNRVTQVKTPEIDGYAAIQVAFGKRRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
VSKP+ G + V L EF+++ D G + + F GQ VDVTG +IGKG
Sbjct: 61 VSKPLAGHLAKAGVEAGHVLKEFQIEADQLASFKAGDQVAVTIFAEGQKVDVTGTSIGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KRHNF RA+HG S+SH + GS G QDPGRVF K+MAG +G + T++ L +
Sbjct: 121 FQGGIKRHNFSSNRASHGNSLSHNAPGSIGMAQDPGRVFPGKRMAGHLGDVQSTMQGLTI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD R L+LVKG VPGA K S ++VR + K+
Sbjct: 181 VRVDADRQLLLVKGAVPGA-KGSDVVVRPAVKA 212
>gi|126736644|ref|ZP_01752384.1| ribosomal protein L3 [Roseobacter sp. CCS2]
gi|126713957|gb|EBA10828.1| ribosomal protein L3 [Roseobacter sp. CCS2]
Length = 283
Score = 221 bits (562), Expect = 8e-56, Method: Composition-based stats.
Identities = 123/215 (57%), Positives = 161/215 (74%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
+R+G++A+K+GMT ++ +G++IPVTVL L+N QVV RT D NGY AVQ+GAG AK K
Sbjct: 2 LRTGLIAKKVGMTRLFMEDGKQIPVTVLSLENLQVVAQRTADTNGYTAVQLGAGNAKAKR 61
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SK MRG F++ V PK+K+ EFRV ++++ VG + +++ GQ VDV G +IGKGF
Sbjct: 62 TSKAMRGHFAAAKVEPKRKVAEFRVAP-ENMINVGETLTANHYFEGQYVDVCGTSIGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRHNFGGLRATHGVSISHRSHGSTG QDPG+VFK KKMAG MG +VT +NL+VV
Sbjct: 121 AGAMKRHNFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAAKVTTQNLQVV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D RG+I+VKG VPG+ K W+ ++D+ K
Sbjct: 181 KTDADRGVIMVKGAVPGS-KGGWVTIKDAVKKPTP 214
>gi|225387237|ref|ZP_03757001.1| hypothetical protein CLOSTASPAR_00989 [Clostridium asparagiforme
DSM 15981]
gi|225046655|gb|EEG56901.1| hypothetical protein CLOSTASPAR_00989 [Clostridium asparagiforme
DSM 15981]
Length = 211
Score = 221 bits (562), Expect = 8e-56, Method: Composition-based stats.
Identities = 86/211 (40%), Positives = 123/211 (58%), Gaps = 3/211 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++A K+GMT +++ G IPVTVL C V +T+D +GY AVQVG + + K
Sbjct: 1 MKKAILATKVGMTQIFDENGVLIPVTVLQAGPCVVTQVKTVDNDGYKAVQVGFVDKRDKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP +G F VS K+ + E R++ + V F G +D T ++ GKGF
Sbjct: 61 VNKPQKGHFDKAGVSYKRYVRELRLEN-AEEYSVKDEIKADIFAQGDKIDATAISKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KR+ HG S HR GS G PGRVFK K M G+MG ++T++NLEVV
Sbjct: 120 QGAIKRYGQSRGPMAHG-SKFHRHQGSNGSATTPGRVFKGKGMPGQMGNKQITIQNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
VD + L+L+KG VPG KK S + ++++ K
Sbjct: 179 KVDTENNLLLIKGAVPGPKK-SLVTIKETVK 208
>gi|15603280|ref|NP_246354.1| 50S ribosomal protein L3 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|42559689|sp|Q9CL32|RL3_PASMU RecName: Full=50S ribosomal protein L3
gi|12721790|gb|AAK03499.1| RpL3 [Pasteurella multocida subsp. multocida str. Pm70]
Length = 209
Score = 221 bits (562), Expect = 8e-56, Method: Composition-based stats.
Identities = 96/211 (45%), Positives = 133/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V RK+GMT ++N +G IPVTV+ ++ +V +T++ +GY A+QV G K V
Sbjct: 1 MIGLVGRKVGMTRIFNEDGVSIPVTVIEIEANRVTQVKTVETDGYSAIQVTTGSKKASRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F V + L+EFR + ++ +G + F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFVKAGVEAGRGLWEFRTTEGEE-FTLGQEINVDIFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV
Sbjct: 120 GGVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGNERVTVQSLEVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA N ++V+ + K+
Sbjct: 180 VDAERKLLLVKGAVPGA-TNGDVIVKPAVKA 209
>gi|91791539|ref|YP_561190.1| 50S ribosomal protein L3 [Shewanella denitrificans OS217]
gi|123061370|sp|Q12SV9|RL3_SHEDO RecName: Full=50S ribosomal protein L3
gi|91713541|gb|ABE53467.1| LSU ribosomal protein L3P [Shewanella denitrificans OS217]
Length = 212
Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats.
Identities = 90/213 (42%), Positives = 128/213 (60%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT ++ +G IPVTV+ + +V +TL+ +GY A+QV G K
Sbjct: 1 MAIGLIGRKVGMTRIFTEDGVSIPVTVIEVAGNRVTQVKTLETDGYRALQVTTGTKKANR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
++K G F+ V + L+E R+ + + + VG+ + F VDVTG + GKG
Sbjct: 61 ITKAEAGHFAKGGVEAGRGLWEMRLADGEGEGIEVGAELNVDIFAETVKVDVTGQSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KR NF THG S++HRS+GS G Q PGRVFK KKM+G MG +VT +NL V
Sbjct: 121 FQGGVKRWNFRTQDMTHGNSLAHRSNGSIGQNQTPGRVFKGKKMSGHMGAEQVTTQNLHV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD +R LILV+G VPGA I ++ + K+
Sbjct: 181 VRVDSERNLILVRGAVPGATNGDLI-IKPAVKA 212
>gi|115525585|ref|YP_782496.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris BisA53]
gi|122295408|sp|Q07KL8|RL3_RHOP5 RecName: Full=50S ribosomal protein L3
gi|115519532|gb|ABJ07516.1| LSU ribosomal protein L3P [Rhodopseudomonas palustris BisA53]
Length = 240
Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats.
Identities = 125/219 (57%), Positives = 159/219 (72%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT V+ G IPVTVL L NCQV+ HRT +KNGY A+Q+G+G K
Sbjct: 1 MRSGVIAQKVGMTRVFTETGEHIPVTVLKLGNCQVLGHRTSEKNGYTALQLGSGSRKTVY 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+ K RG F++ V PK+K+ EFRV + D ++P+G+ +F VGQ VDVTG ++GKGF
Sbjct: 61 MPKAERGQFAAAKVEPKRKVAEFRVSE-DSMIPIGAEIQADHFVVGQFVDVTGTSVGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR NFGGLRATHGVS+SHRS GSTG RQDPG+ FKNKKM G MG +R+T NL VV
Sbjct: 120 AGGIKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
+D +RGLILV+G VPG+ K WI VRD+ K A+
Sbjct: 180 QLDVERGLILVEGAVPGS-KGGWIAVRDAVKKALPADAP 217
>gi|322831072|ref|YP_004211099.1| 50S ribosomal protein L3 [Rahnella sp. Y9602]
gi|321166273|gb|ADW71972.1| 50S ribosomal protein L3 [Rahnella sp. Y9602]
Length = 209
Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats.
Identities = 95/211 (45%), Positives = 132/211 (62%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V + LD +GY AVQV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLDNDGYRAVQVTTGSKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR+ + ++ G S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRLAEGEE-FTAGQNISVEIFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA + I V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGATGGNLI-VKPAVKA 209
>gi|261346935|ref|ZP_05974579.1| 50S ribosomal protein L3 [Providencia rustigianii DSM 4541]
gi|282565000|gb|EFB70535.1| 50S ribosomal protein L3 [Providencia rustigianii DSM 4541]
Length = 209
Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats.
Identities = 94/211 (44%), Positives = 132/211 (62%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++N +V +T + +GY A+QV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEIENNRVTQVKTAETDGYNAIQVTTGSKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L EFR ++ + G S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRILREFRTEEGTE-FKAGESISVEIFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA S ++V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGA-TGSNLIVKPAVKA 209
>gi|123444098|ref|YP_001008068.1| 50S ribosomal protein L3 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|238752687|ref|ZP_04614158.1| 50S ribosomal protein L3 [Yersinia rohdei ATCC 43380]
gi|238783169|ref|ZP_04627195.1| 50S ribosomal protein L3 [Yersinia bercovieri ATCC 43970]
gi|238788910|ref|ZP_04632700.1| 50S ribosomal protein L3 [Yersinia frederiksenii ATCC 33641]
gi|238797238|ref|ZP_04640739.1| 50S ribosomal protein L3 [Yersinia mollaretii ATCC 43969]
gi|332163259|ref|YP_004299836.1| 50S ribosomal protein L3 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|166234608|sp|A1JS47|RL3_YERE8 RecName: Full=50S ribosomal protein L3
gi|122091059|emb|CAL13942.1| 50S ribosomal protein L3 [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|238709114|gb|EEQ01361.1| 50S ribosomal protein L3 [Yersinia rohdei ATCC 43380]
gi|238715965|gb|EEQ07951.1| 50S ribosomal protein L3 [Yersinia bercovieri ATCC 43970]
gi|238718875|gb|EEQ10690.1| 50S ribosomal protein L3 [Yersinia mollaretii ATCC 43969]
gi|238722937|gb|EEQ14587.1| 50S ribosomal protein L3 [Yersinia frederiksenii ATCC 33641]
gi|318607744|emb|CBY29242.1| LSU ribosomal protein L3p (L3e) [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325667489|gb|ADZ44133.1| 50S ribosomal protein L3 [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330861855|emb|CBX72026.1| 50S ribosomal protein L3 [Yersinia enterocolitica W22703]
Length = 209
Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats.
Identities = 94/211 (44%), Positives = 130/211 (61%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V ++L+ +GY AVQV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKSLENDGYRAVQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR+ + G S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRL-PEGQEFTAGQEISVEIFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG +G RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHLGDERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA + I V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGATGGNLI-VKPAVKA 209
>gi|255282605|ref|ZP_05347160.1| 50S ribosomal protein L3 [Bryantella formatexigens DSM 14469]
gi|255266898|gb|EET60103.1| 50S ribosomal protein L3 [Bryantella formatexigens DSM 14469]
Length = 211
Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats.
Identities = 90/214 (42%), Positives = 126/214 (58%), Gaps = 3/214 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++A K+GMT ++N +G PVTVL C V +T++ +GY AVQVG + + K
Sbjct: 1 MKKAILATKVGMTQIFNDDGVLTPVTVLQAGPCVVTQIKTVENDGYSAVQVGYVDKREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP++G F VS K+ L EF++ + V F G +D T ++ GKGF
Sbjct: 61 VNKPLKGHFDKAGVSYKRYLREFKLDN-AEEYQVAQEIKADIFAAGDKIDATAISKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH HG S HR GS G DP +VF+ KKMAG MG RVT++NLEVV
Sbjct: 120 QGAIKRHGLHRGPMAHG-SKYHRHAGSNGACSDPSKVFRGKKMAGHMGHKRVTIQNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VD + L+LVKG VPG KK S + ++++ K+
Sbjct: 179 RVDAENNLLLVKGAVPGPKK-SLVSIKETVKAGK 211
>gi|260914680|ref|ZP_05921146.1| 50S ribosomal protein L3 [Pasteurella dagmatis ATCC 43325]
gi|260631279|gb|EEX49464.1| 50S ribosomal protein L3 [Pasteurella dagmatis ATCC 43325]
Length = 209
Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats.
Identities = 96/211 (45%), Positives = 133/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V RK+GMT ++N +G IPVTV+ ++ +V +T++ +GY A+QV G K V
Sbjct: 1 MIGLVGRKVGMTRIFNEDGVSIPVTVIEIEANRVTQVKTVETDGYSAIQVTTGSKKASRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F V + L+EFR + ++ +G + F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFVKAGVEAGRGLWEFRTTEGEE-FTLGQEINVDIFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV
Sbjct: 120 GGVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA N ++V+ + K+
Sbjct: 180 VDAERKLLLVKGAVPGA-TNGDVIVKPAVKA 209
>gi|119899706|ref|YP_934919.1| 50S ribosomal protein L3 [Azoarcus sp. BH72]
gi|166233115|sp|A1KB27|RL3_AZOSB RecName: Full=50S ribosomal protein L3
gi|119672119|emb|CAL96033.1| 50S ribosomal protein L3 [Azoarcus sp. BH72]
Length = 212
Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats.
Identities = 104/213 (48%), Positives = 137/213 (64%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ +GR IPVTVL + + +V +T + +GY AVQV G+ +
Sbjct: 1 MSLGLVGRKVGMTRIFADDGRSIPVTVLDVSDNKVTQIKTPEADGYSAVQVAFGKRRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V KP+ G + V P + L EFRV+ + L G S F+VGQ VDVTG++IGKG
Sbjct: 61 VVKPIAGHLAKAGVEPSRVLKEFRVEPEGLASLKAGDQVSVEIFSVGQKVDVTGVSIGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
FSG +KRHNF RA+HG S+SH S GS G QDPGRVF K+MAG+ G + T LEV
Sbjct: 121 FSGPIKRHNFSSNRASHGNSVSHNSPGSIGMAQDPGRVFPGKRMAGQYGAVQRTTLGLEV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD +R L+LVKG VPGA K ++VR + K+
Sbjct: 181 VRVDAERQLLLVKGAVPGA-KGGDVVVRPAIKA 212
>gi|296105028|ref|YP_003615174.1| 50S ribosomal protein L3 [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295059487|gb|ADF64225.1| 50S ribosomal protein L3 [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295096961|emb|CBK86051.1| LSU ribosomal protein L3P [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 209
Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats.
Identities = 94/211 (44%), Positives = 133/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY A+QV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRLAEGEE-FTVGQDISVELFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA S ++V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209
>gi|219871730|ref|YP_002476105.1| 50S ribosomal protein L3 [Haemophilus parasuis SH0165]
gi|254803675|sp|B8F755|RL3_HAEPS RecName: Full=50S ribosomal protein L3
gi|219691934|gb|ACL33157.1| 50S ribosomal protein L3 [Haemophilus parasuis SH0165]
Length = 208
Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats.
Identities = 100/211 (47%), Positives = 134/211 (63%), Gaps = 3/211 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V RK+GMT ++N +G IPVTV+ ++ +V +TL+ +GY AVQV G K V
Sbjct: 1 MIGLVGRKVGMTRIFNEDGVSIPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKASRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F V + L+EFR + ++ +G + FT + VDVTG + GKGF
Sbjct: 61 TKPEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFTDVKKVDVTGTSKGKGFQ 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV
Sbjct: 119 GGVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVR 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA NS ++V+ + K+
Sbjct: 179 VDAERKLLLVKGSVPGA-TNSDVIVKPAVKA 208
>gi|163868650|ref|YP_001609859.1| 50S ribosomal protein L3 [Bartonella tribocorum CIP 105476]
gi|189042832|sp|A9IW27|RL3_BART1 RecName: Full=50S ribosomal protein L3
gi|161018306|emb|CAK01864.1| 50S ribosomal protein L3 [Bartonella tribocorum CIP 105476]
Length = 245
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 133/219 (60%), Positives = 164/219 (74%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+KLGMT +YN G +PVTVL L+NCQVV RT++KNGY AVQ+G G AKVKN
Sbjct: 1 MRSGVIAQKLGMTRIYNDAGEHVPVTVLRLENCQVVAQRTVEKNGYTAVQLGVGFAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
S+ +RG F+ +V PK K+ EFRV D+LL +G+ + +F GQ VDVTG +IGKGF
Sbjct: 61 TSQALRGHFAKASVEPKAKIAEFRVSP-DNLLDIGTEITVEHFVPGQRVDVTGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKRHNFGG RA+HG SI+HR+HGSTG QDPG+VFK KKMAG MG RVT +N+EVV
Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGQVRVTTQNIEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
S D +RGLILV+G V G+ K SWILVRD+ K +
Sbjct: 180 STDIERGLILVRGAVSGS-KGSWILVRDAVKKPLPDNAP 217
>gi|302390958|ref|YP_003826778.1| 50S ribosomal protein L3P [Acetohalobium arabaticum DSM 5501]
gi|302203035|gb|ADL11713.1| LSU ribosomal protein L3P [Acetohalobium arabaticum DSM 5501]
Length = 209
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 92/212 (43%), Positives = 134/212 (63%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M ++ +K+GMT +++ EG IPVTV+ C +V +T +K+GY A+Q+G GEAK
Sbjct: 1 MTREILGKKVGMTQIFDDEGEVIPVTVIEAGPCSIVQKKTEEKDGYKAIQLGFGEAKESK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP++G F V PK+ + E R+ ++D+ VG F VG VDVTG + GKGF
Sbjct: 61 LNKPLKGHFDKYGVEPKEYIREVRINEEDE-YEVGDEIKADIFAVGDRVDVTGTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR NF THG S ++R GS G DP RVFK KKM GRMG +VT++NL+V
Sbjct: 120 AGTVKRWNFNLGPKTHG-SRNYRLPGSIGASADPARVFKGKKMPGRMGREQVTIQNLKVA 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD ++ ++ VKG VPG KK + + +++S K
Sbjct: 179 KVDPEKNILAVKGAVPGPKK-ALVRIKESVKG 209
>gi|153210324|ref|ZP_01947604.1| ribosomal protein L3 [Coxiella burnetii 'MSU Goat Q177']
gi|212218074|ref|YP_002304861.1| 50S ribosomal protein L3 [Coxiella burnetii CbuK_Q154]
gi|226725156|sp|B6J5D2|RL3_COXB1 RecName: Full=50S ribosomal protein L3
gi|120575146|gb|EAX31770.1| ribosomal protein L3 [Coxiella burnetii 'MSU Goat Q177']
gi|212012336|gb|ACJ19716.1| LSU ribosomal protein L3P [Coxiella burnetii CbuK_Q154]
Length = 217
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 88/214 (41%), Positives = 126/214 (58%), Gaps = 1/214 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK GMT ++ G IPVTV+ + ++ +T++ +GY A QV G+
Sbjct: 1 MSIGLIGRKCGMTRIFTETGSSIPVTVVEVIPNRITQVKTVETDGYRAFQVAYGKKSSAR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP+ G +S V L EFR+ ++ G F GQ+VDV G+T GKG
Sbjct: 61 VNKPLAGHYSKAAVEAGNALREFRLGNEELTEAKAGDELKVDIFKEGQVVDVRGLTRGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G +KRHNF ATHG S+SHR+ GS G Q PGRV+K KKMAG++G TV++ E+
Sbjct: 121 FAGTVKRHNFRTQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGQLGNVYCTVQSQEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+ VD +R L+L+KG +PGA I+ + S K
Sbjct: 181 IKVDVERNLLLIKGALPGAPGGEVIITQSSKKRK 214
>gi|167463902|ref|ZP_02328991.1| Ribosomal protein L3 [Paenibacillus larvae subsp. larvae
BRL-230010]
gi|322381126|ref|ZP_08055129.1| 50S ribosomal protein L3-like protein [Paenibacillus larvae subsp.
larvae B-3650]
gi|321154702|gb|EFX46973.1| 50S ribosomal protein L3-like protein [Paenibacillus larvae subsp.
larvae B-3650]
Length = 208
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 88/212 (41%), Positives = 121/212 (57%), Gaps = 4/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGMT V+ EG +PVTV+ C V+ + + +GY A+QVG + K K
Sbjct: 1 MTKGILGKKLGMTQVFTPEGLVVPVTVIQAGPCVVLQKKDSENDGYEAIQVGFEDKKEKR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP G N +PK+ + EFR + D VG F G+ VDVTG + GKGF
Sbjct: 61 ANKPEIGHAKKANTTPKRYVQEFRGVQLSD-YEVGQELKADLFAEGEFVDVTGTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRHN +HG S HR GS G RVFK K + G MG VT++NL+V+
Sbjct: 120 QGVIKRHNQSRGPMSHG-SRYHRGPGSMGSIA-ANRVFKGKNLPGHMGHETVTLQNLQVI 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R +ILVKG +PG KNS++ V+ + K
Sbjct: 178 KVDAERNVILVKGSIPGP-KNSYVKVQSAVKK 208
>gi|322515635|ref|ZP_08068613.1| 50S ribosomal protein L3 [Actinobacillus ureae ATCC 25976]
gi|322118286|gb|EFX90569.1| 50S ribosomal protein L3 [Actinobacillus ureae ATCC 25976]
Length = 208
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 99/211 (46%), Positives = 134/211 (63%), Gaps = 3/211 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V RK+GMT V+ +G IPVTV+ ++ +V +TL+ +GY A+QV G K V
Sbjct: 1 MIGLVGRKVGMTRVFTEDGVSIPVTVIEIEANRVTQVKTLENDGYSAIQVTTGTKKASRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F V + L+EFR + ++ +G + FT + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINIDIFTDVKKVDVTGTSKGKGFA 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV
Sbjct: 119 GGVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVR 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA NS ++V+ + K+
Sbjct: 179 VDAERKLLLVKGAVPGA-TNSDVIVKPAVKA 208
>gi|323966282|gb|EGB61717.1| 50S ribosomal protein L3 [Escherichia coli M863]
Length = 209
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 95/211 (45%), Positives = 132/211 (62%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY A+QV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
KP G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+
Sbjct: 61 IKPEAGHFAKAGVEAGRGLWEFRLAEGEE-FTVGQSISVELFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA S ++V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209
>gi|307946286|ref|ZP_07661621.1| 50S ribosomal protein L3 [Roseibium sp. TrichSKD4]
gi|307769950|gb|EFO29176.1| 50S ribosomal protein L3 [Roseibium sp. TrichSKD4]
Length = 240
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 132/215 (61%), Positives = 161/215 (74%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT +YN G +PVTVL L+ CQVV HRT +KNGY A+QVG G AKV+N
Sbjct: 1 MRSGVIAQKVGMTRIYNDAGANVPVTVLRLEKCQVVAHRTEEKNGYTALQVGVGLAKVRN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
K MRG ++ V PK+KL EFRV D+++ VG+ + ++ GQ VDVTG +IGKGF
Sbjct: 61 TPKAMRGHYAVAKVEPKRKLAEFRVSA-DNMIDVGAEITADHYVEGQFVDVTGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKRHNFGG RA+HG SISHRSHGSTG QDPGRVFK KKMAG MG RVT +NL+VV
Sbjct: 120 AGVMKRHNFGGGRASHGNSISHRSHGSTGQCQDPGRVFKGKKMAGHMGDARVTTQNLKVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D +RGLI+V+G VPG K WILVRD+ K A+
Sbjct: 180 RTDVERGLIMVEGSVPG-TKGGWILVRDAIKKALP 213
>gi|170769506|ref|ZP_02903959.1| ribosomal protein L3 [Escherichia albertii TW07627]
gi|170121563|gb|EDS90494.1| ribosomal protein L3 [Escherichia albertii TW07627]
Length = 209
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 94/211 (44%), Positives = 133/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY A+QV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRLAEGEE-FTVGQSISVELFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA S ++V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209
>gi|296447530|ref|ZP_06889452.1| 50S ribosomal protein L3 [Methylosinus trichosporium OB3b]
gi|296254918|gb|EFH02023.1| 50S ribosomal protein L3 [Methylosinus trichosporium OB3b]
Length = 237
Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 137/219 (62%), Positives = 165/219 (75%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT V+ G +PVTVL LD CQVV HRT+++NGY AVQ+G G AKVKN
Sbjct: 1 MRSGVIAQKVGMTRVFTEAGEHVPVTVLKLDGCQVVAHRTMEQNGYTAVQLGIGRAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VSK RG F+ V PK KL EFRV + +LLPVG+ + +F VGQ VDVTG ++GKGF
Sbjct: 61 VSKAERGRFAIAKVEPKLKLAEFRV-AESELLPVGAEITADHFVVGQFVDVTGTSLGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKR NFGGLRATHGVS+SHRSHGSTG RQDPG+ FKNKKMAG MG +RVT +NL VV
Sbjct: 120 AGAMKRWNFGGLRATHGVSVSHRSHGSTGGRQDPGKTFKNKKMAGHMGVDRVTTQNLRVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
D +RGL+LV+G VPG WI VRD+ K A+ +
Sbjct: 180 QTDVERGLLLVEGSVPG-HAGGWIFVRDAVKRALPAEAP 217
>gi|238754175|ref|ZP_04615533.1| 50S ribosomal protein L3 [Yersinia ruckeri ATCC 29473]
gi|238707671|gb|EEQ00031.1| 50S ribosomal protein L3 [Yersinia ruckeri ATCC 29473]
Length = 209
Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 94/211 (44%), Positives = 131/211 (62%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V ++L+ +GY AVQV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKSLENDGYRAVQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR+ + + G S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRLAEGQE-FTAGQEISVEIFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG +G RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHLGDERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA + I V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGATGGNLI-VKPAVKA 209
>gi|261342790|ref|ZP_05970648.1| 50S ribosomal protein L3 [Enterobacter cancerogenus ATCC 35316]
gi|288314968|gb|EFC53906.1| 50S ribosomal protein L3 [Enterobacter cancerogenus ATCC 35316]
Length = 209
Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 95/211 (45%), Positives = 133/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY AVQV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRLAEGEE-FTVGQDISVELFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA S ++V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209
>gi|167854921|ref|ZP_02477697.1| 50S ribosomal protein L3 [Haemophilus parasuis 29755]
gi|167853988|gb|EDS25226.1| 50S ribosomal protein L3 [Haemophilus parasuis 29755]
Length = 208
Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 99/211 (46%), Positives = 134/211 (63%), Gaps = 3/211 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V RK+GMT ++N +G +PVTV+ ++ +V +TL+ +GY AVQV G K V
Sbjct: 1 MIGLVGRKVGMTRIFNEDGVSVPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKASRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F V + L+EFR + ++ +G + FT + VDVTG + GKGF
Sbjct: 61 TKPEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFTDVKKVDVTGTSKGKGFQ 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV
Sbjct: 119 GGVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVR 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA NS ++V+ + K+
Sbjct: 179 VDAERKLLLVKGSVPGA-TNSDVIVKPAVKA 208
>gi|50122951|ref|YP_052118.1| 50S ribosomal protein L3 [Pectobacterium atrosepticum SCRI1043]
gi|81826993|sp|Q6CZX0|RL3_ERWCT RecName: Full=50S ribosomal protein L3
gi|49613477|emb|CAG76928.1| 50S ribosomal subunit protein L3 [Pectobacterium atrosepticum
SCRI1043]
Length = 209
Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 96/211 (45%), Positives = 134/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY AVQV AG K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLANDGYRAVQVTAGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L EFR+ + ++ VG S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRTLREFRLSEGEE-FTVGQSISVEIFADIKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR+ GS G Q PG+VFK KKMAG++G RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA S ++V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209
>gi|293391695|ref|ZP_06636029.1| ribosomal protein L3 [Aggregatibacter actinomycetemcomitans D7S-1]
gi|290952229|gb|EFE02348.1| ribosomal protein L3 [Aggregatibacter actinomycetemcomitans D7S-1]
Length = 208
Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 97/211 (45%), Positives = 132/211 (62%), Gaps = 3/211 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V RK+GMT ++N +G +PVTV+ ++ +V +TL+ +GY AVQV G K V
Sbjct: 1 MIGLVGRKVGMTRIFNEDGVSVPVTVIEVEANRVTQVKTLENDGYTAVQVTTGSKKASRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F V + L+EFR + ++ +G + F + VDVTG + GKGF
Sbjct: 61 TKPEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFADVKKVDVTGTSKGKGFQ 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV
Sbjct: 119 GGVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGNERVTVQSLEVVR 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA S ++V+ + K+
Sbjct: 179 VDAERKLLLVKGAVPGA-TGSDVIVKPAVKA 208
>gi|91977652|ref|YP_570311.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris BisB5]
gi|123748930|sp|Q134S9|RL3_RHOPS RecName: Full=50S ribosomal protein L3
gi|91684108|gb|ABE40410.1| LSU ribosomal protein L3P [Rhodopseudomonas palustris BisB5]
Length = 241
Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 129/219 (58%), Positives = 157/219 (71%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT V+ G IPVTVL L NCQVV HRT +KNGY+A+Q+G+G K
Sbjct: 1 MRSGVIAQKVGMTRVFTEAGEHIPVTVLKLGNCQVVAHRTTEKNGYVALQLGSGARKTVY 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+ K RG F+ V PK+K+ EFRV + D L+PVG+ +F VGQ VDVTG + GKGF
Sbjct: 61 MPKAERGQFAVAKVEPKRKVAEFRVSE-DALIPVGAEIQADHFVVGQFVDVTGTSTGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR NFGGLRATHGVS+SHRS GSTG RQDPG+ FKNKKM G MG +R+T NL VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
D +RGLILV+G VPG+ K WI VRD+ K A+
Sbjct: 180 QTDVERGLILVEGAVPGS-KGGWISVRDAVKKALPADAP 217
>gi|320094580|ref|ZP_08026346.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 178 str.
F0338]
gi|319978495|gb|EFW10072.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 178 str.
F0338]
Length = 221
Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 95/209 (45%), Positives = 135/209 (64%), Gaps = 2/209 (0%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ RK+GMT V++ +GR +P+TV+ + V RT + +GY A+Q+G GE + V+KP
Sbjct: 15 LLGRKIGMTQVWDADGRLVPLTVVQVGTNVVTQVRTEEVDGYSAIQLGFGEIDPRKVTKP 74
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
++G F+ V+P++ L E R + D VG S F GQ VDV+G T GKGF+G M
Sbjct: 75 LQGHFAKAGVAPRRHLAEVRTSEHDS-YEVGQELDASTFEAGQSVDVSGNTKGKGFAGVM 133
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KRH F G+ A+HG +HR GS G PGR+FK +MAGRMGGNR TV+NL + +VD
Sbjct: 134 KRHGFAGVSASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGGNRRTVQNLRIQAVDT 193
Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213
++GL+L+ G +PG KN +LVR + K A
Sbjct: 194 EKGLLLISGAIPGP-KNGVVLVRSAVKGA 221
>gi|114319619|ref|YP_741302.1| 50S ribosomal protein L3P [Alkalilimnicola ehrlichii MLHE-1]
gi|122312456|sp|Q0ABH5|RL3_ALHEH RecName: Full=50S ribosomal protein L3
gi|114226013|gb|ABI55812.1| LSU ribosomal protein L3P [Alkalilimnicola ehrlichii MLHE-1]
Length = 218
Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 102/210 (48%), Positives = 133/210 (63%), Gaps = 2/210 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK GMT V+ +G +PVTV+ +V RT +++GY VQV AG +
Sbjct: 1 MSIGIVGRKAGMTRVFTEDGASVPVTVIEASPNRVTQVRTPERDGYSGVQVTAGSRRPNR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDD-LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
VSKPM G F++ V + ++EFRV L G + F GQ+VD+TG + GKG
Sbjct: 61 VSKPMAGHFAAAGVDAGRGVWEFRVSDGQAIELEAGKELTVETFEAGQVVDITGTSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G +KRHNF ATHG S++HR+ GS G Q PGRVFK KKMAG+MG R TVKNLEV
Sbjct: 121 FAGTVKRHNFRTQDATHGNSLAHRAPGSIGQNQTPGRVFKGKKMAGQMGNKRSTVKNLEV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
V VD +R L+LV+G VPGA S ++VR +
Sbjct: 181 VRVDAERHLLLVRGSVPGAV-GSDVIVRPA 209
>gi|294638052|ref|ZP_06716312.1| 50S ribosomal protein L3 [Edwardsiella tarda ATCC 23685]
gi|291088844|gb|EFE21405.1| 50S ribosomal protein L3 [Edwardsiella tarda ATCC 23685]
Length = 209
Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 94/211 (44%), Positives = 131/211 (62%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V + LD +GY A+QV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLDNDGYRAIQVTTGSKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L EFR+ + ++ +G S F + VDVTG++ GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRVLREFRLSEGEE-FTIGQNISVEIFADVKKVDVTGISKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG +G RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHLGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA I V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGATGGDLI-VKPAVKA 209
>gi|94498476|ref|ZP_01305032.1| ribosomal protein L3 [Sphingomonas sp. SKA58]
gi|94422019|gb|EAT07064.1| ribosomal protein L3 [Sphingomonas sp. SKA58]
Length = 252
Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 128/219 (58%), Positives = 161/219 (73%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+GV+A+K+GMT ++ +GR +PVTVL L+ QVV + D++GY+AVQ+GAG AKVKN
Sbjct: 2 MRTGVIAKKVGMTRLFQEDGRHVPVTVLALEGNQVVARKETDRDGYIAVQLGAGVAKVKN 61
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP RG F+ V PK +L EFRV +D LL VG+ + +F GQLVDV G T GKGF
Sbjct: 62 VAKPQRGQFAKAEVEPKARLVEFRV-AEDALLDVGAEIAADHFVAGQLVDVAGHTQGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKR FGG+RATHGVSISHR+HGSTG RQDPGRVFKNKKMAG MG T +NLE+V
Sbjct: 121 AGAMKRWGFGGMRATHGVSISHRAHGSTGNRQDPGRVFKNKKMAGHMGDRERTQQNLEIV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
D +RGL+ VKG VPGA K +W+ V+D+ K +
Sbjct: 181 RTDVERGLLFVKGSVPGA-KGTWLTVKDAVKVPRHADAP 218
>gi|161609283|ref|NP_886582.2| 50S ribosomal protein L3 [Bordetella bronchiseptica RB50]
gi|161610405|ref|NP_882394.2| 50S ribosomal protein L3 [Bordetella parapertussis 12822]
gi|161610757|ref|NP_882123.2| 50S ribosomal protein L3 [Bordetella pertussis Tohama I]
Length = 229
Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 95/216 (43%), Positives = 127/216 (58%), Gaps = 3/216 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G+V RK+GMT ++ +G IPVTVL + N +V ++L+ +GY A+QV G + V
Sbjct: 12 RLGLVGRKVGMTRIFTEDGESIPVTVLDVSNNRVTQVKSLESDGYAAIQVTYGTRRATRV 71
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP--SYFTVGQLVDVTGMTIGKG 119
KP G ++ L EFR+ S F GQ VDVTG +IGKG
Sbjct: 72 VKPQAGHYAKAGAEAGSILKEFRLDPARAAEFAAGAVIAVESVFEAGQQVDVTGTSIGKG 131
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G +KRHNFG RA+HG S SHR GS G QDPGR+F K+M+G MG TV+NL+V
Sbjct: 132 FAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMSGHMGDVTRTVQNLDV 191
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
V VD +RGL++VKG VPG ++VR + K+
Sbjct: 192 VRVDAERGLLMVKGAVPG-HAGGDVIVRPAVKAPAK 226
>gi|56707478|ref|YP_169374.1| 50S ribosomal protein L3 [Francisella tularensis subsp. tularensis
SCHU S4]
gi|110669949|ref|YP_666506.1| 50S ribosomal protein L3 [Francisella tularensis subsp. tularensis
FSC198]
gi|254370829|ref|ZP_04986834.1| hypothetical protein [Francisella tularensis subsp. tularensis
FSC033]
gi|81820815|sp|Q5NHW8|RL3_FRATT RecName: Full=50S ribosomal protein L3
gi|122971067|sp|Q14JC0|RL3_FRAT1 RecName: Full=50S ribosomal protein L3
gi|54112825|gb|AAV29046.1| NT02FT0098 [synthetic construct]
gi|56603970|emb|CAG44958.1| 50S ribosomal protein L3 [Francisella tularensis subsp. tularensis
SCHU S4]
gi|110320282|emb|CAL08341.1| 50S ribosomal protein L3 [Francisella tularensis subsp. tularensis
FSC198]
gi|151569072|gb|EDN34726.1| hypothetical protein FTBG_00644 [Francisella tularensis subsp.
tularensis FSC033]
gi|282158622|gb|ADA78013.1| 50S ribosomal protein L3 [Francisella tularensis subsp. tularensis
NE061598]
Length = 211
Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 103/212 (48%), Positives = 138/212 (65%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK GMT ++ +G IPVTV+ ++ +V +T++K+GY A+QV G K N
Sbjct: 1 MSLGLVGRKCGMTRIFTEDGVSIPVTVVQVEPNKVTQVKTVEKDGYNAIQVTTGFKKRSN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KPM G ++ +V P + L+EF V VGS F + F GQ VDV G++ GKGF
Sbjct: 61 VNKPMAGHYAKASVEPGRGLWEFTVDA-AAEYQVGSSFDATMFEAGQKVDVRGVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRHNF ATHG S+SHR HGSTG Q PGRVFKNKKMAG +G VT+++LEVV
Sbjct: 120 QGGVKRHNFATQDATHGNSLSHRVHGSTGQNQTPGRVFKNKKMAGHLGNENVTIQSLEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + GL+L+KG +PG+ I+V + KS
Sbjct: 180 RVDAENGLLLLKGGIPGSV-GGDIIVTPAVKS 210
>gi|319443065|ref|ZP_07992221.1| 50S ribosomal protein L3 [Corynebacterium variabile DSM 44702]
Length = 218
Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 87/214 (40%), Positives = 124/214 (57%), Gaps = 2/214 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ +KLGMT +++ E R +PVTV+ C V RT D +GY AVQ+ G+ + V
Sbjct: 7 KGILGKKLGMTQIFDEENRVVPVTVVEAGPCVVTQVRTKDTDGYEAVQIAFGDIDPRKVK 66
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP G F V+P++ + E RV +D VG + F VDVTG + GKG++G
Sbjct: 67 KPQAGHFKKAGVTPRRHVTEIRV-EDASAYEVGQDITAELFADVTFVDVTGTSKGKGYAG 125
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
AMKRH F G A+HG +HR G G PGRVFK +MAGRMG N+VT++NL++ V
Sbjct: 126 AMKRHGFAGQGASHGNQAAHRRVGGIGACATPGRVFKGTRMAGRMGNNQVTLQNLKIARV 185
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
D + L+L+KG +PG + V+ + K +
Sbjct: 186 DAESNLVLIKGAIPG-INGGIVTVKTAVKGGAHA 218
>gi|330430101|gb|AEC21435.1| 50S ribosomal protein L3 [Pusillimonas sp. T7-7]
Length = 229
Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 99/216 (45%), Positives = 132/216 (61%), Gaps = 3/216 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G+V RK+GMT ++ EG IPVTVL + N +V ++ + +GY AVQV G + V
Sbjct: 12 RLGLVGRKVGMTRIFTEEGESIPVTVLDVSNNRVTQVKSPETDGYAAVQVAYGTRRASRV 71
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP--SYFTVGQLVDVTGMTIGKG 119
+KP G ++ L EFR+ S F GQ VDVTG TIGKG
Sbjct: 72 TKPQAGHYAKAGAEAGSILKEFRLDPAKAAEFTAGAVVAVESVFEAGQKVDVTGTTIGKG 131
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KRH+F G R +HG S+SHR+ GSTG QDPGRVF KKM+G +G TV+NL++
Sbjct: 132 YAGTIKRHHFAGQRNSHGNSVSHRAPGSTGMAQDPGRVFPGKKMSGHLGDATRTVQNLDI 191
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
V VD +RGL+LVKG VPG KN+ I+VR + K +
Sbjct: 192 VRVDAERGLLLVKGAVPG-HKNADIVVRPAIKMSAK 226
>gi|152972227|ref|YP_001337373.1| 50S ribosomal protein L3 [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|206576036|ref|YP_002236281.1| ribosomal protein L3 [Klebsiella pneumoniae 342]
gi|238896816|ref|YP_002921561.1| 50S ribosomal protein L3 [Klebsiella pneumoniae NTUH-K2044]
gi|262045177|ref|ZP_06018204.1| 50S ribosomal protein L3 [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|288933266|ref|YP_003437325.1| 50S ribosomal protein L3 [Klebsiella variicola At-22]
gi|290512069|ref|ZP_06551437.1| 50S ribosomal protein L3 [Klebsiella sp. 1_1_55]
gi|330002294|ref|ZP_08304288.1| 50S ribosomal protein L3 [Klebsiella sp. MS 92-3]
gi|166233150|sp|A6TEX2|RL3_KLEP7 RecName: Full=50S ribosomal protein L3
gi|226730525|sp|B5XN94|RL3_KLEP3 RecName: Full=50S ribosomal protein L3
gi|150957076|gb|ABR79106.1| 50S ribosomal protein L3 [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|206565094|gb|ACI06870.1| ribosomal protein L3 [Klebsiella pneumoniae 342]
gi|238549143|dbj|BAH65494.1| 50S ribosomal protein L3 [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|259037497|gb|EEW38741.1| 50S ribosomal protein L3 [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|288887995|gb|ADC56313.1| 50S ribosomal protein L3 [Klebsiella variicola At-22]
gi|289775859|gb|EFD83859.1| 50S ribosomal protein L3 [Klebsiella sp. 1_1_55]
gi|328537367|gb|EGF63617.1| 50S ribosomal protein L3 [Klebsiella sp. MS 92-3]
Length = 209
Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats.
Identities = 95/211 (45%), Positives = 132/211 (62%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY A+QV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR+ D + VG S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRL-ADGEEFTVGQNISVELFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA S ++V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209
>gi|85060256|ref|YP_455958.1| 50S ribosomal protein L3 [Sodalis glossinidius str. 'morsitans']
gi|109893557|sp|Q2NQM2|RL3_SODGM RecName: Full=50S ribosomal protein L3
gi|84780776|dbj|BAE75553.1| 50S ribosomal protein L3 [Sodalis glossinidius str. 'morsitans']
Length = 209
Score = 219 bits (559), Expect = 1e-55, Method: Composition-based stats.
Identities = 96/211 (45%), Positives = 133/211 (63%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT ++ +G IPVTV+ ++ +V + L+ +GY A+QV AG K V
Sbjct: 1 MKGLIGRKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLENDGYRAIQVTAGTKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
KP G F+ V + L+EFRV +D + + VG + F + VDVTG + GKGF+
Sbjct: 61 IKPEAGHFAKAGVEAGRGLWEFRV-EDGEEVTVGQSITVELFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA I V+ + K+
Sbjct: 180 VDVERNLLLVKGAVPGATGGDLI-VKPAVKA 209
>gi|317131369|ref|YP_004090683.1| 50S ribosomal protein L3 [Ethanoligenens harbinense YUAN-3]
gi|315469348|gb|ADU25952.1| 50S ribosomal protein L3 [Ethanoligenens harbinense YUAN-3]
Length = 211
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 89/213 (41%), Positives = 128/213 (60%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ G++ +K+GMT +++ G IPVTV+ C VV +T++ +GY +VQ+G E + K
Sbjct: 1 MQKGIIGKKIGMTQLFDERGNVIPVTVIEAGPCVVVQKKTVEVDGYESVQLGFEEVREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP +G F V+ K+ L EFR+ +D L VG + F G VDV G + GKG+
Sbjct: 61 LNKPEKGHFEKAGVASKRVLREFRL-EDMSALNVGDIVKADVFAAGDRVDVAGTSKGKGY 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR L+ THG HR GS G + RV K KKMAG+MG RVTV+NL+VV
Sbjct: 120 AGVIKRWGHHRLKMTHGTGPVHREVGSMGASTNMSRVPKGKKMAGQMGNERVTVQNLDVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD + LI +KG +PG K +++ DS K A
Sbjct: 180 KVDAENNLIALKGAIPGP-KGGIVILADSVKKA 211
>gi|256821662|ref|YP_003145625.1| 50S ribosomal protein L3 [Kangiella koreensis DSM 16069]
gi|256795201|gb|ACV25857.1| ribosomal protein L3 [Kangiella koreensis DSM 16069]
Length = 210
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 99/212 (46%), Positives = 128/212 (60%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V K GMT V+ +G IPVTV+ D ++ +T D +GY AVQ+ G K
Sbjct: 1 MAIGIVGIKRGMTRVFTEDGVSIPVTVVEADPNRIAQLKTTDVDGYEAVQITTGSRKANR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+SK G + V + L+EFRV D VG V F GQ VDVTG + GKG+
Sbjct: 61 ISKAEAGHYKKAGVEAGRSLWEFRVNSLDG-FEVGGVVKVDIFEAGQKVDVTGTSKGKGY 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR NF G +THG S+SHR+ GS G Q PGRVFK KKM+G MG RVTV+ LEVV
Sbjct: 120 AGVIKRWNFRGQDSTHGNSLSHRAPGSIGQNQTPGRVFKGKKMSGHMGAERVTVQTLEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPGA ++VR + K+
Sbjct: 180 RVDAERNLLLIKGAVPGA-TGGDVIVRPAEKA 210
>gi|293602635|ref|ZP_06685078.1| 50S ribosomal protein L3 [Achromobacter piechaudii ATCC 43553]
gi|292819007|gb|EFF78045.1| 50S ribosomal protein L3 [Achromobacter piechaudii ATCC 43553]
Length = 233
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 97/216 (44%), Positives = 129/216 (59%), Gaps = 3/216 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G+V RK+GMT ++ EG IPVTVL + N +V ++L+ +GY A+QV G + V
Sbjct: 16 RLGLVGRKVGMTRIFTEEGESIPVTVLDVSNNRVTQVKSLETDGYAAIQVAYGTRRASRV 75
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP--SYFTVGQLVDVTGMTIGKG 119
++P G ++ L EFR+ S F GQ VDVTG TIGKG
Sbjct: 76 AQPQTGHYAKAGTEAGSILKEFRLDPARAAEFAAGSVIAVESVFEAGQQVDVTGTTIGKG 135
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G +KRH+FG RA+HG S SHR GS G QDPGR+F K+MAG +G TV+NL+V
Sbjct: 136 FAGTIKRHHFGSQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMAGHLGDVTRTVQNLDV 195
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
V VD +RGL+LVKG VPG + I+VR + K+
Sbjct: 196 VRVDVERGLLLVKGAVPG-HAGADIVVRPAIKAPAK 230
>gi|113460208|ref|YP_718265.1| 50S ribosomal protein L3 [Haemophilus somnus 129PT]
gi|170718246|ref|YP_001785266.1| 50S ribosomal protein L3 [Haemophilus somnus 2336]
gi|122945127|sp|Q0I163|RL3_HAES1 RecName: Full=50S ribosomal protein L3
gi|189042848|sp|B0UX13|RL3_HAES2 RecName: Full=50S ribosomal protein L3
gi|112822251|gb|ABI24340.1| LSU ribosomal protein L3P [Haemophilus somnus 129PT]
gi|168826375|gb|ACA31746.1| ribosomal protein L3 [Haemophilus somnus 2336]
Length = 208
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 99/211 (46%), Positives = 134/211 (63%), Gaps = 3/211 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V RK+GMT ++N +G IPVTV+ ++ +V +TL+ +GY AVQV G K V
Sbjct: 1 MIGLVGRKVGMTRIFNEDGVSIPVTVIEIEANRVTQVKTLENDGYTAVQVTTGFKKASRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F V + L+EFR + ++ +G + FT + VDVTG + GKGF
Sbjct: 61 TKPEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFTDVKKVDVTGTSKGKGFQ 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LE+V
Sbjct: 119 GGVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEIVR 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA NS ++V+ + K+
Sbjct: 179 VDVERKLLLVKGSVPGA-TNSDVIVKPAVKA 208
>gi|326404337|ref|YP_004284419.1| 50S ribosomal protein L3 [Acidiphilium multivorum AIU301]
gi|325051199|dbj|BAJ81537.1| 50S ribosomal protein L3 [Acidiphilium multivorum AIU301]
Length = 225
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 123/216 (56%), Positives = 164/216 (75%), Gaps = 2/216 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+G++A+KLGMT ++ +G +PVTVLH+D+ +VV RT +++GY AVQ+G G AK KN
Sbjct: 2 MRTGIIAKKLGMTRLFREDGTHVPVTVLHMDDVRVVAARTKERDGYAAVQLGFGHAKTKN 61
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KPM+G F++ V P +L EFRV DD +L G V S ++FTVGQ VDV G++ GKGF
Sbjct: 62 VTKPMKGHFAAAKVEPANRLVEFRV-ADDAVLEAGQVLSAAHFTVGQKVDVAGISKGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR NF GL A+HGVSISHRS GSTG RQDPG+ F+NKKMAG +GG R+T NLEV
Sbjct: 121 AGGMKRWNFRGLEASHGVSISHRSLGSTGNRQDPGKTFRNKKMAGHLGGERITTLNLEVA 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
++D+ R LI++KG VPGA K+ ++LVRD+ K+A
Sbjct: 181 AIDEARNLIMIKGAVPGA-KDGYVLVRDAVKTARPA 215
>gi|156932231|ref|YP_001436147.1| 50S ribosomal protein L3 [Cronobacter sakazakii ATCC BAA-894]
gi|166233141|sp|A7MPI7|RL3_ENTS8 RecName: Full=50S ribosomal protein L3
gi|156530485|gb|ABU75311.1| hypothetical protein ESA_00002 [Cronobacter sakazakii ATCC BAA-894]
Length = 209
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 97/211 (45%), Positives = 132/211 (62%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ EG IPVTV+ ++ +V + L +GY AVQV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEEGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR+ D + VG S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRL-ADGEEYTVGQSISVELFAEVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA S ++V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209
>gi|261866795|ref|YP_003254717.1| 50S ribosomal protein L3 [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|315633455|ref|ZP_07888745.1| 50S ribosomal protein L3 [Aggregatibacter segnis ATCC 33393]
gi|261412127|gb|ACX81498.1| ribosomal protein L3 [Aggregatibacter actinomycetemcomitans D11S-1]
gi|315477497|gb|EFU68239.1| 50S ribosomal protein L3 [Aggregatibacter segnis ATCC 33393]
Length = 208
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 97/211 (45%), Positives = 132/211 (62%), Gaps = 3/211 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V RK+GMT ++N +G +PVTV+ ++ +V +TL+ +GY AVQV G K V
Sbjct: 1 MIGLVGRKVGMTRIFNEDGVSVPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKASRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F V + L+EFR + ++ +G + F + VDVTG + GKGF
Sbjct: 61 TKPEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFADVKKVDVTGTSKGKGFQ 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV
Sbjct: 119 GGVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGNERVTVQSLEVVR 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA S ++V+ + K+
Sbjct: 179 VDAERKLLLVKGAVPGA-TGSDVIVKPAVKA 208
>gi|259047555|ref|ZP_05737956.1| 50S ribosomal protein L3 [Granulicatella adiacens ATCC 49175]
gi|259035746|gb|EEW37001.1| 50S ribosomal protein L3 [Granulicatella adiacens ATCC 49175]
Length = 210
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 85/213 (39%), Positives = 126/213 (59%), Gaps = 3/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT + G IPVTV+ + V+ +T++ +GY AVQ+G + +
Sbjct: 1 MTKGILGKKVGMTQYFTEAGELIPVTVVEVTPNVVLQLKTIENDGYEAVQLGFDDLREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++P +G + N +PK+ + EF + VG + F G +VDVTG + GKGF
Sbjct: 61 SNRPAKGHVAKANATPKRFIREFNNVEL-SEYEVGQEITVDVFKAGDIVDVTGTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH HG S HR GS G P RVFK K + G+MGG+R+T++NLEVV
Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGGASFPSRVFKGKALPGQMGGDRITIQNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD +R +IL+KG VPG+KK S + ++ + KS
Sbjct: 179 KVDAERNVILIKGNVPGSKK-SLVEIKTAIKSK 210
>gi|163859273|ref|YP_001633571.1| 50S ribosomal protein L3 [Bordetella petrii DSM 12804]
gi|212288248|sp|A9IJ01|RL3_BORPD RecName: Full=50S ribosomal protein L3
gi|163263001|emb|CAP45304.1| 50S ribosomal protein L3 [Bordetella petrii]
Length = 233
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 97/216 (44%), Positives = 130/216 (60%), Gaps = 3/216 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G+V RK+GMT ++ EG IPVTVL + N +V ++L+ +GY AVQV G + V
Sbjct: 16 RLGLVGRKVGMTRIFTEEGESIPVTVLDVSNNRVTQIKSLEADGYAAVQVAYGTRRASRV 75
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKD--DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
++P G ++ L EFR+ + P + S F GQ VDVTG TIGKG
Sbjct: 76 AQPQTGHYAKAGTEAGSILKEFRLDPARLAEFTPGAVIAVESVFEAGQQVDVTGTTIGKG 135
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G +KRH+FG RA+HG S SHR GS G QDPGR+F K+M+G +G TV+NL+V
Sbjct: 136 FAGTIKRHHFGSQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMSGHLGDVTRTVQNLDV 195
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
V VD +RGL+LVKG VPG + VR + K+
Sbjct: 196 VRVDAERGLLLVKGAVPGHAGGDVV-VRPAIKAPAK 230
>gi|238763730|ref|ZP_04624689.1| 50S ribosomal protein L3 [Yersinia kristensenii ATCC 33638]
gi|238698032|gb|EEP90790.1| 50S ribosomal protein L3 [Yersinia kristensenii ATCC 33638]
Length = 209
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 93/211 (44%), Positives = 129/211 (61%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V ++L+ +GY AVQV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKSLENDGYRAVQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+ FR+ + G S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWGFRL-PEGQEFTAGQEISVEIFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG +G RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHLGDERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA + I V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGATGGNLI-VKPAVKA 209
>gi|15612697|ref|NP_241000.1| 50S ribosomal protein L3 [Bacillus halodurans C-125]
gi|7674305|sp|Q9Z9L4|RL3_BACHD RecName: Full=50S ribosomal protein L3
gi|4512404|dbj|BAA75271.1| rplC homologue (identity of 81% to B. subtilis ) [Bacillus
halodurans]
gi|10172746|dbj|BAB03853.1| 50S ribosomal protein L3 [Bacillus halodurans C-125]
Length = 209
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 96/213 (45%), Positives = 130/213 (61%), Gaps = 4/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT V+ G IPVTV+ V+ +T+D +GY AVQ+G + K N
Sbjct: 1 MSKGILGKKVGMTQVFAENGDVIPVTVIEAAPNVVLQKKTVDSDGYEAVQLGFDDQKQNN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + +PK+ + E R D+ VG F G +VDVTG + GKGF
Sbjct: 61 ANKPEKGHAAKAETAPKRFIKEIRGVNLDE-FEVGQEIKVDAFAEGDIVDVTGTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GA+KRHN +HG S HR GS G DP RVFK K + GRMGG +VTV+NLE++
Sbjct: 120 AGAIKRHNQARGPMSHG-SRYHRRPGSMGPV-DPNRVFKGKALPGRMGGEQVTVQNLEII 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD +R L+LVKG VPGAKK S++ VR + KS
Sbjct: 178 KVDAERNLLLVKGNVPGAKK-SYVTVRSAIKSK 209
>gi|82701900|ref|YP_411466.1| ribosomal protein L3 [Nitrosospira multiformis ATCC 25196]
gi|109893529|sp|Q2YAZ7|RL3_NITMU RecName: Full=50S ribosomal protein L3
gi|82409965|gb|ABB74074.1| LSU ribosomal protein L3P [Nitrosospira multiformis ATCC 25196]
Length = 236
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 96/217 (44%), Positives = 132/217 (60%), Gaps = 2/217 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ EG PVTVL + N +V +T +GY AVQV G+ +
Sbjct: 1 MSLGLVGRKVGMTRIFTEEGDSQPVTVLDVSNNRVTQIKTPATDGYSAVQVTFGKRRAIR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP G F+ V + L EFRV ++ L G+V F GQ VDVTG +IGKG
Sbjct: 61 VNKPSAGHFAKAAVEAGEILREFRVAEEILGTLSPGTVIGLDIFQPGQRVDVTGTSIGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++GA+KRH F RA+HG S SH GS G QDPGRVF K+M G +G R T++NLE+
Sbjct: 121 YAGAIKRHGFASNRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGNVRRTIQNLEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
+ +D +RGL+++KG +PG+ K + V S +SA
Sbjct: 181 LRIDAERGLLIIKGAIPGS-KGGDVTVSPSIRSARPT 216
>gi|255067458|ref|ZP_05319313.1| 50S ribosomal protein L3 [Neisseria sicca ATCC 29256]
gi|255048253|gb|EET43717.1| 50S ribosomal protein L3 [Neisseria sicca ATCC 29256]
Length = 238
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 104/212 (49%), Positives = 134/212 (63%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K
Sbjct: 25 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 84
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+K G F+ V + L EF + ++ L G + S F VGQLVDVTG + GKG
Sbjct: 85 VNKAEAGHFAKAGVEAGRGLIEFALAEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 144
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEV
Sbjct: 145 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 204
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
V VD +R L+LVKG VPGA NS ++VR S K
Sbjct: 205 VRVDAERQLLLVKGAVPGAV-NSDVVVRPSVK 235
>gi|260584416|ref|ZP_05852163.1| 50S ribosomal protein L3 [Granulicatella elegans ATCC 700633]
gi|260157934|gb|EEW93003.1| 50S ribosomal protein L3 [Granulicatella elegans ATCC 700633]
Length = 210
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 86/213 (40%), Positives = 126/213 (59%), Gaps = 3/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT + G IPVTV+ + V+ +T++ +GY AVQ+G + +
Sbjct: 1 MTKGILGKKVGMTQYFTEAGELIPVTVVEVTPNVVLQLKTIENDGYEAVQLGFDDLREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++P +G + N +PK+ + EF + VG + F G +VDVTG + GKGF
Sbjct: 61 SNRPAKGHVAKANATPKRFIREFNNVEL-SEYEVGQEITVDVFKAGDIVDVTGTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH HG S HR GS G P RVFK K + G+MGGNR+T++NLEVV
Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGGASFPSRVFKGKALPGQMGGNRITIQNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD +R +IL+KG VPG+KK S + ++ + KS
Sbjct: 179 KVDAERNVILIKGNVPGSKK-SLVEIKTAIKSK 210
>gi|288942072|ref|YP_003444312.1| 50S ribosomal protein L3 [Allochromatium vinosum DSM 180]
gi|288897444|gb|ADC63280.1| 50S ribosomal protein L3 [Allochromatium vinosum DSM 180]
Length = 216
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 92/216 (42%), Positives = 128/216 (59%), Gaps = 2/216 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M GV+ RK GMT V+ G IPVTV+ + +V ++ + +GY A+QV G+ +
Sbjct: 1 MSIGVIGRKAGMTRVFTEAGESIPVTVIEVTPNRVSQVKSEETDGYRAIQVAFGQRRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KPM G ++ V + L EFR++ + L VG S S F GQ VDV G+T G+G
Sbjct: 61 VTKPMAGHYAKAGVEAGEVLREFRLEGGEGADLQVGQEISVSIFEPGQKVDVRGVTKGRG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
FSG ++RH+F G THG S+SHR+ GS G Q PGRV+K KKMAG +G +NLEV
Sbjct: 121 FSGVIRRHHFAGQDRTHGNSLSHRAPGSIGQNQTPGRVWKGKKMAGHLGAANRCQQNLEV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
V +D +R L+LV+G VPG +++ S K
Sbjct: 181 VRIDAERNLLLVRGGVPGPTGGRLVVL-PSVKQKNK 215
>gi|89255670|ref|YP_513031.1| 50S ribosomal protein L3 [Francisella tularensis subsp. holarctica
LVS]
gi|115314171|ref|YP_762894.1| 50S ribosomal protein L3 [Francisella tularensis subsp. holarctica
OSU18]
gi|118496852|ref|YP_897902.1| 50S ribosomal protein L3 [Francisella tularensis subsp. novicida
U112]
gi|134302585|ref|YP_001122556.1| 50S ribosomal protein L3 [Francisella tularensis subsp. tularensis
WY96-3418]
gi|156501620|ref|YP_001427685.1| 50S ribosomal protein L3 [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|167009889|ref|ZP_02274820.1| 50S ribosomal protein L3 [Francisella tularensis subsp. holarctica
FSC200]
gi|187932143|ref|YP_001892128.1| 50S ribosomal protein L3 [Francisella tularensis subsp.
mediasiatica FSC147]
gi|290953211|ref|ZP_06557832.1| 50S ribosomal protein L3 [Francisella tularensis subsp. holarctica
URFT1]
gi|295313579|ref|ZP_06804168.1| 50S ribosomal protein L3 [Francisella tularensis subsp. holarctica
URFT1]
gi|109893430|sp|Q2A5H0|RL3_FRATH RecName: Full=50S ribosomal protein L3
gi|122325787|sp|Q0BNS7|RL3_FRATO RecName: Full=50S ribosomal protein L3
gi|166233143|sp|A7N9S6|RL3_FRATF RecName: Full=50S ribosomal protein L3
gi|166233144|sp|A0Q4I3|RL3_FRATN RecName: Full=50S ribosomal protein L3
gi|166233145|sp|A4IZT4|RL3_FRATW RecName: Full=50S ribosomal protein L3
gi|226725179|sp|B2SDY5|RL3_FRATM RecName: Full=50S ribosomal protein L3
gi|89143501|emb|CAJ78677.1| 50S ribosomal protein L3 [Francisella tularensis subsp. holarctica
LVS]
gi|115129070|gb|ABI82257.1| ribosomal protein L3 [Francisella tularensis subsp. holarctica
OSU18]
gi|118422758|gb|ABK89148.1| 50S ribosomal protein L3 [Francisella novicida U112]
gi|134050362|gb|ABO47433.1| ribosomal protein L3 [Francisella tularensis subsp. tularensis
WY96-3418]
gi|156252223|gb|ABU60729.1| ribosomal protein L3 [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|187713052|gb|ACD31349.1| 50S ribosomal protein L3 [Francisella tularensis subsp.
mediasiatica FSC147]
gi|328676321|gb|AEB27191.1| LSU ribosomal protein L3p (L3e) [Francisella cf. novicida Fx1]
Length = 210
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 103/212 (48%), Positives = 138/212 (65%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK GMT ++ +G IPVTV+ ++ +V +T++K+GY A+QV G K N
Sbjct: 1 MSLGLVGRKCGMTRIFTEDGVSIPVTVVQVEPNKVTQVKTVEKDGYNAIQVTTGFKKRSN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KPM G ++ +V P + L+EF V VGS F + F GQ VDV G++ GKGF
Sbjct: 61 VNKPMAGHYAKASVEPGRGLWEFTVDA-AAEYQVGSSFDATMFEAGQKVDVRGVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRHNF ATHG S+SHR HGSTG Q PGRVFKNKKMAG +G VT+++LEVV
Sbjct: 120 QGGVKRHNFATQDATHGNSLSHRVHGSTGQNQTPGRVFKNKKMAGHLGNENVTIQSLEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + GL+L+KG +PG+ I+V + KS
Sbjct: 180 RVDAENGLLLLKGGIPGSV-GGDIIVTPAVKS 210
>gi|238758764|ref|ZP_04619938.1| 50S ribosomal protein L3 [Yersinia aldovae ATCC 35236]
gi|238703061|gb|EEP95604.1| 50S ribosomal protein L3 [Yersinia aldovae ATCC 35236]
Length = 209
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 95/211 (45%), Positives = 129/211 (61%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY AVQV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLANDGYRAVQVTTGSKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR+ + + G S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRLAEGQE-FTAGQEISVEIFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG MG RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHMGDERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA + I V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGATGGNLI-VKPAVKA 209
>gi|42559604|sp|Q7VTD3|RL3_BORPE RecName: Full=50S ribosomal protein L3
gi|42559605|sp|Q7W2F6|RL3_BORPA RecName: Full=50S ribosomal protein L3
gi|42559606|sp|Q7WRC5|RL3_BORBR RecName: Full=50S ribosomal protein L3
gi|33564827|emb|CAE39770.1| 50S ribosomal protein L3 [Bordetella parapertussis]
gi|33575068|emb|CAE30531.1| 50S ribosomal protein L3 [Bordetella bronchiseptica RB50]
Length = 233
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 95/216 (43%), Positives = 127/216 (58%), Gaps = 3/216 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G+V RK+GMT ++ +G IPVTVL + N +V ++L+ +GY A+QV G + V
Sbjct: 16 RLGLVGRKVGMTRIFTEDGESIPVTVLDVSNNRVTQVKSLESDGYAAIQVTYGTRRATRV 75
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP--SYFTVGQLVDVTGMTIGKG 119
KP G ++ L EFR+ S F GQ VDVTG +IGKG
Sbjct: 76 VKPQAGHYAKAGAEAGSILKEFRLDPARAAEFAAGAVIAVESVFEAGQQVDVTGTSIGKG 135
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G +KRHNFG RA+HG S SHR GS G QDPGR+F K+M+G MG TV+NL+V
Sbjct: 136 FAGTIKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMSGHMGDVTRTVQNLDV 195
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
V VD +RGL++VKG VPG ++VR + K+
Sbjct: 196 VRVDAERGLLMVKGAVPG-HAGGDVIVRPAVKAPAK 230
>gi|329298533|ref|ZP_08255869.1| 50S ribosomal protein L3 [Plautia stali symbiont]
Length = 208
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 95/211 (45%), Positives = 130/211 (61%), Gaps = 3/211 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ EG IPVTV+ ++ +V + L+ +GY A+QV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEEGVSIPVTVIEVEANRVTQVKGLENDGYQAIQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
KP G F+ V + L+EFR + ++ VG S F + VDVTG + GKGF
Sbjct: 61 GKPEAGHFAKAGVEAGRGLWEFRTEGEE--YSVGQSISVEIFADVKKVDVTGTSKGKGFV 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++LE+V
Sbjct: 119 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLEIVR 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA S + V+ + K+
Sbjct: 179 VDAERNLLLVKGAVPGA-TGSDLFVKPAVKA 208
>gi|320540609|ref|ZP_08040259.1| 50S ribosomal subunit protein L3 [Serratia symbiotica str. Tucson]
gi|320029540|gb|EFW11569.1| 50S ribosomal subunit protein L3 [Serratia symbiotica str. Tucson]
Length = 209
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 94/211 (44%), Positives = 131/211 (62%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V + LD +GY A+QV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKGLDTDGYRAIQVTTGSKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR+++ + G S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRLEEGQE-FTAGQEISVEIFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG +G RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHLGDERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA + I V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGATGGNLI-VKPAVKA 209
>gi|16762843|ref|NP_458460.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|16766729|ref|NP_462344.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|29144330|ref|NP_807672.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56415359|ref|YP_152434.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|62181944|ref|YP_218361.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|168260850|ref|ZP_02682823.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|168468001|ref|ZP_02701838.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|194445166|ref|YP_002042690.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194447875|ref|YP_002047463.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194472945|ref|ZP_03078929.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194737134|ref|YP_002116382.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197248367|ref|YP_002148359.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|197264223|ref|ZP_03164297.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197364289|ref|YP_002143926.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|198243139|ref|YP_002217402.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200387538|ref|ZP_03214150.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|205354932|ref|YP_002228733.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207858682|ref|YP_002245333.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|213052953|ref|ZP_03345831.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213583772|ref|ZP_03365598.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
gi|213613028|ref|ZP_03370854.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
gi|213646335|ref|ZP_03376388.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|213865564|ref|ZP_03387683.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
gi|224585235|ref|YP_002639034.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238913845|ref|ZP_04657682.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|289806054|ref|ZP_06536683.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
gi|289824750|ref|ZP_06544215.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|42559567|sp|P60445|RL3_SALTI RecName: Full=50S ribosomal protein L3
gi|42559568|sp|P60446|RL3_SALTY RecName: Full=50S ribosomal protein L3
gi|81309571|sp|Q57J32|RL3_SALCH RecName: Full=50S ribosomal protein L3
gi|81821488|sp|Q5PIV2|RL3_SALPA RecName: Full=50S ribosomal protein L3
gi|226730559|sp|B5F8F2|RL3_SALA4 RecName: Full=50S ribosomal protein L3
gi|226730560|sp|B5FJL4|RL3_SALDC RecName: Full=50S ribosomal protein L3
gi|226730561|sp|B5R291|RL3_SALEP RecName: Full=50S ribosomal protein L3
gi|226730562|sp|B5RH15|RL3_SALG2 RecName: Full=50S ribosomal protein L3
gi|226730563|sp|B4TKL5|RL3_SALHS RecName: Full=50S ribosomal protein L3
gi|226730564|sp|B4SUU0|RL3_SALNS RecName: Full=50S ribosomal protein L3
gi|226730565|sp|B5BGY6|RL3_SALPK RecName: Full=50S ribosomal protein L3
gi|226730566|sp|B4TXE2|RL3_SALSV RecName: Full=50S ribosomal protein L3
gi|254803688|sp|C0Q0B6|RL3_SALPC RecName: Full=50S ribosomal protein L3
gi|25294952|pir||AI1005 50S ribosomal chain protein L3 [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16421997|gb|AAL22303.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp.
enterica serovar Typhimurium str. LT2]
gi|16505149|emb|CAD08173.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp.
enterica serovar Typhi]
gi|29139968|gb|AAO71532.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp.
enterica serovar Typhi str. Ty2]
gi|56129616|gb|AAV79122.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp.
enterica serovar Paratyphi A str. ATCC 9150]
gi|62129577|gb|AAX67280.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
gi|194403829|gb|ACF64051.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|194406179|gb|ACF66398.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194459309|gb|EDX48148.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194712636|gb|ACF91857.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|195628908|gb|EDX48318.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|197095766|emb|CAR61336.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp.
enterica serovar Paratyphi A str. AKU_12601]
gi|197212070|gb|ACH49467.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|197242478|gb|EDY25098.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|197937655|gb|ACH74988.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|199604636|gb|EDZ03181.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|205274713|emb|CAR39769.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|205350127|gb|EDZ36758.1| ribosomal protein L3 [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|206710485|emb|CAR34843.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp.
enterica serovar Enteritidis str. P125109]
gi|224469763|gb|ACN47593.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|261248596|emb|CBG26434.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp.
enterica serovar Typhimurium str. D23580]
gi|267995649|gb|ACY90534.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301159983|emb|CBW19502.1| 50S ribosomal subunit protein L3 [Salmonella enterica subsp.
enterica serovar Typhimurium str. SL1344]
gi|312914463|dbj|BAJ38437.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|320087885|emb|CBY97648.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|321226487|gb|EFX51537.1| LSU ribosomal protein L3p (L3e) [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|322615019|gb|EFY11943.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322617306|gb|EFY14207.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322625528|gb|EFY22353.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322626370|gb|EFY23179.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322632118|gb|EFY28871.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322635003|gb|EFY31726.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322643296|gb|EFY39863.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322646620|gb|EFY43127.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322649966|gb|EFY46385.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322652683|gb|EFY49023.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322659560|gb|EFY55804.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322665498|gb|EFY61685.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322670392|gb|EFY66531.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322670465|gb|EFY66599.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322675041|gb|EFY71124.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322681578|gb|EFY77607.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322685922|gb|EFY81911.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|322716431|gb|EFZ08002.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
gi|323131798|gb|ADX19228.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|323194030|gb|EFZ79230.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323196452|gb|EFZ81603.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323202309|gb|EFZ87354.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323207342|gb|EFZ92292.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323211222|gb|EFZ96067.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
gi|323216069|gb|EGA00800.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323223440|gb|EGA07768.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323226830|gb|EGA11020.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323231808|gb|EGA15918.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323233239|gb|EGA17334.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323237306|gb|EGA21371.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323245541|gb|EGA29540.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323249047|gb|EGA32969.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323250670|gb|EGA34551.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323256899|gb|EGA40613.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323263048|gb|EGA46595.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323266048|gb|EGA49543.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323272805|gb|EGA56208.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|326625183|gb|EGE31528.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
gi|326630081|gb|EGE36424.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 209
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 95/211 (45%), Positives = 132/211 (62%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY AVQV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRLAEGEE-YTVGQSISVELFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA ++V+ + K+
Sbjct: 180 VDAERNLLLVKGGVPGA-TGCDLIVKPAVKA 209
>gi|329122783|ref|ZP_08251355.1| 50S ribosomal protein L3 [Haemophilus aegyptius ATCC 11116]
gi|327472047|gb|EGF17485.1| 50S ribosomal protein L3 [Haemophilus aegyptius ATCC 11116]
Length = 208
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 97/211 (45%), Positives = 132/211 (62%), Gaps = 3/211 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V RK+GMT ++N +G +PVTV+ ++ +V +TL+ +GY AVQV G K V
Sbjct: 1 MIGLVGRKVGMTRIFNEDGVSVPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSRKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F V + L+EFR + ++ +G + F + VDVTG + GKGF
Sbjct: 61 TKPEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFADVKKVDVTGTSKGKGFQ 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV
Sbjct: 119 GGVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVR 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA N ++V+ + K+
Sbjct: 179 VDAERKLLLVKGSVPGAI-NGDVIVKPAVKA 208
>gi|326390661|ref|ZP_08212216.1| 50S ribosomal protein L3 [Thermoanaerobacter ethanolicus JW 200]
gi|325993339|gb|EGD51776.1| 50S ribosomal protein L3 [Thermoanaerobacter ethanolicus JW 200]
Length = 210
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 97/213 (45%), Positives = 131/213 (61%), Gaps = 3/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ G++ +K GMT ++N +G IPVTV+ C VV +T++ +GY A+QVG G+ K K
Sbjct: 1 MKKGILGKKHGMTQIFNEKGEVIPVTVIEAGPCVVVQKKTVETDGYNAIQVGFGDVKEKR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP+ G F V V K+ L EF++ D VGS F G VDVTG++ GKGF
Sbjct: 61 LTKPLIGHFKKVGVPFKRYLREFKLD-DISGYEVGSEIKVDIFKPGDRVDVTGISKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR+ +HG S HR GS G DPGR FK K M G MG RVT++NLEVV
Sbjct: 120 AGVVKRYGANRGPMSHG-SKYHRRVGSMGATTDPGRTFKGKIMPGHMGHERVTIQNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD + L+LVKG VPG K S ++++DS KS
Sbjct: 179 KVDPELNLLLVKGSVPGP-KGSLLIIKDSVKSK 210
>gi|16272718|ref|NP_438936.1| 50S ribosomal protein L3 [Haemophilus influenzae Rd KW20]
gi|68249373|ref|YP_248485.1| 50S ribosomal protein L3 [Haemophilus influenzae 86-028NP]
gi|145630522|ref|ZP_01786302.1| acetyl-CoA:acetoacetyl-CoA transferase subunit alpha [Haemophilus
influenzae R3021]
gi|145632130|ref|ZP_01787865.1| acetyl-CoA:acetoacetyl-CoA transferase subunit alpha [Haemophilus
influenzae 3655]
gi|145634812|ref|ZP_01790520.1| 50S ribosomal protein L3 [Haemophilus influenzae PittAA]
gi|145636667|ref|ZP_01792334.1| 50S ribosomal protein L3 [Haemophilus influenzae PittHH]
gi|145638423|ref|ZP_01794033.1| 50S ribosomal protein L3 [Haemophilus influenzae PittII]
gi|229844644|ref|ZP_04464783.1| 50S ribosomal protein L3 [Haemophilus influenzae 6P18H1]
gi|229845827|ref|ZP_04465939.1| 50S ribosomal protein L3 [Haemophilus influenzae 7P49H1]
gi|260579868|ref|ZP_05847698.1| 50S ribosomal protein L3 [Haemophilus influenzae RdAW]
gi|260581595|ref|ZP_05849392.1| 50S ribosomal protein L3 [Haemophilus influenzae NT127]
gi|319775289|ref|YP_004137777.1| 50S ribosomal subunit protein L3 [Haemophilus influenzae F3047]
gi|319897729|ref|YP_004135926.1| 50S ribosomal subunit protein l3 [Haemophilus influenzae F3031]
gi|325577127|ref|ZP_08147611.1| 50S ribosomal protein L3 [Haemophilus parainfluenzae ATCC 33392]
gi|1173047|sp|P44344|RL3_HAEIN RecName: Full=50S ribosomal protein L3
gi|81336200|sp|Q4QMC2|RL3_HAEI8 RecName: Full=50S ribosomal protein L3
gi|1573787|gb|AAC22436.1| ribosomal protein L3 (rpL3) [Haemophilus influenzae Rd KW20]
gi|68057572|gb|AAX87825.1| 50S ribosomal protein L3 [Haemophilus influenzae 86-028NP]
gi|144983912|gb|EDJ91354.1| acetyl-CoA:acetoacetyl-CoA transferase subunit alpha [Haemophilus
influenzae R3021]
gi|144987037|gb|EDJ93567.1| acetyl-CoA:acetoacetyl-CoA transferase subunit alpha [Haemophilus
influenzae 3655]
gi|145267978|gb|EDK07974.1| 50S ribosomal protein L3 [Haemophilus influenzae PittAA]
gi|145270193|gb|EDK10129.1| 50S ribosomal protein L3 [Haemophilus influenzae PittHH]
gi|145272752|gb|EDK12659.1| 50S ribosomal protein L3 [Haemophilus influenzae PittII]
gi|229810831|gb|EEP46548.1| 50S ribosomal protein L3 [Haemophilus influenzae 7P49H1]
gi|229812358|gb|EEP48048.1| 50S ribosomal protein L3 [Haemophilus influenzae 6P18H1]
gi|260093152|gb|EEW77085.1| 50S ribosomal protein L3 [Haemophilus influenzae RdAW]
gi|260095188|gb|EEW79079.1| 50S ribosomal protein L3 [Haemophilus influenzae NT127]
gi|301155330|emb|CBW14796.1| 50S ribosomal subunit protein L3 [Haemophilus parainfluenzae T3T1]
gi|301169494|emb|CBW29095.1| 50S ribosomal subunit protein L3 [Haemophilus influenzae 10810]
gi|309751562|gb|ADO81546.1| 50S ribosomal protein L3 [Haemophilus influenzae R2866]
gi|309973732|gb|ADO96933.1| 50S ribosomal protein L3 [Haemophilus influenzae R2846]
gi|317433235|emb|CBY81610.1| 50S ribosomal subunit protein L3 [Haemophilus influenzae F3031]
gi|317449880|emb|CBY86091.1| 50S ribosomal subunit protein L3 [Haemophilus influenzae F3047]
gi|325160709|gb|EGC72830.1| 50S ribosomal protein L3 [Haemophilus parainfluenzae ATCC 33392]
Length = 208
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 97/211 (45%), Positives = 132/211 (62%), Gaps = 3/211 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V RK+GMT ++N +G +PVTV+ ++ +V +TL+ +GY AVQV G K V
Sbjct: 1 MIGLVGRKVGMTRIFNEDGVSVPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F V + L+EFR + ++ +G + F + VDVTG + GKGF
Sbjct: 61 TKPEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFADVKKVDVTGTSKGKGFQ 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV
Sbjct: 119 GGVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVR 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA N ++V+ + K+
Sbjct: 179 VDAERKLLLVKGSVPGAI-NGDVIVKPAVKA 208
>gi|114570345|ref|YP_757025.1| 50S ribosomal protein L3P [Maricaulis maris MCS10]
gi|122315784|sp|Q0ANQ0|RL3_MARMM RecName: Full=50S ribosomal protein L3
gi|114340807|gb|ABI66087.1| LSU ribosomal protein L3P [Maricaulis maris MCS10]
Length = 268
Score = 219 bits (557), Expect = 2e-55, Method: Composition-based stats.
Identities = 130/211 (61%), Positives = 162/211 (76%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+GVVARKLGMT ++ +G +P TVLH+DN QVV H+T D++GY+A+Q+GAGEAK K
Sbjct: 7 RTGVVARKLGMTRIFAEDGSHVPCTVLHMDNVQVVSHKTADRDGYVALQLGAGEAKAKRT 66
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
K MRG F+ V+PK+KL EFRV +D L+ VGS + +F GQ VDV G++IGKGF+
Sbjct: 67 PKAMRGHFAKAKVAPKRKLVEFRV-AEDALIEVGSELTADHFVPGQKVDVAGISIGKGFA 125
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
GAMKRH FGGLRATHGVSISHRSHGSTG QDPG+VFK KKMAG MG RVT +N+EVV
Sbjct: 126 GAMKRHGFGGLRATHGVSISHRSHGSTGQCQDPGKVFKGKKMAGHMGAVRVTTQNIEVVR 185
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +RG++LVKG VPG+ W+ +RD+ K
Sbjct: 186 VDVERGIVLVKGAVPGSA-GGWVELRDAIKG 215
>gi|307267014|ref|ZP_07548530.1| 50S ribosomal protein L3 [Thermoanaerobacter wiegelii Rt8.B1]
gi|306917999|gb|EFN48257.1| 50S ribosomal protein L3 [Thermoanaerobacter wiegelii Rt8.B1]
Length = 210
Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 97/213 (45%), Positives = 132/213 (61%), Gaps = 3/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ G++ +K GMT ++N +G IPVTV+ C VV +T++ +GY A+QVG G+ K K
Sbjct: 1 MKKGILGKKHGMTQIFNEKGEVIPVTVIEAGPCVVVQKKTVETDGYNAIQVGFGDVKEKR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP+ G F V V K+ L EF++ D + VGS F G VDVTG++ GKGF
Sbjct: 61 LTKPLIGHFKKVGVPFKRYLREFKLD-DINGYEVGSEIKVDIFKPGDRVDVTGISKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR+ +HG S HR GS G DPGR FK K M G MG RVT++NLEVV
Sbjct: 120 AGVVKRYGANRGPMSHG-SKYHRRVGSMGATTDPGRTFKGKIMPGHMGHERVTIQNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD + L+LVKG VPG K S ++++DS KS
Sbjct: 179 KVDPELNLLLVKGSVPGP-KGSLLIIKDSVKSK 210
>gi|154706152|ref|YP_001425182.1| 50S ribosomal protein L3 [Coxiella burnetii Dugway 5J108-111]
gi|189042840|sp|A9KD31|RL3_COXBN RecName: Full=50S ribosomal protein L3
gi|154355438|gb|ABS76900.1| LSU ribosomal protein L3P [Coxiella burnetii Dugway 5J108-111]
Length = 217
Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 87/214 (40%), Positives = 125/214 (58%), Gaps = 1/214 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK GMT ++ G IPVTV+ + ++ +T++ +GY A QV G+
Sbjct: 1 MSIGLIGRKCGMTRIFTETGSSIPVTVVEVIPNRITQVKTVETDGYRAFQVAYGKKSSAR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP+ G +S V L EFR+ ++ G F GQ+VDV G+T GKG
Sbjct: 61 VNKPLAGHYSKAAVEAGNALREFRLGNEELTEAKAGDELKVDIFKEGQVVDVRGLTRGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G +K HNF ATHG S+SHR+ GS G Q PGRV+K KKMAG++G TV++ E+
Sbjct: 121 FAGTVKHHNFRTQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGQLGNVYCTVQSQEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+ VD +R L+L+KG +PGA I+ + S K
Sbjct: 181 IKVDVERNLLLIKGALPGAPGGEVIITQSSKKRK 214
>gi|157372776|ref|YP_001480765.1| 50S ribosomal protein L3 [Serratia proteamaculans 568]
gi|166990940|sp|A8GKJ7|RL3_SERP5 RecName: Full=50S ribosomal protein L3
gi|157324540|gb|ABV43637.1| ribosomal protein L3 [Serratia proteamaculans 568]
Length = 209
Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 95/211 (45%), Positives = 129/211 (61%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +KLGMT ++ +G IPVTV+ ++ +V + L +GY AVQV G K V
Sbjct: 1 MIGLVGKKLGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLANDGYRAVQVTTGSKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR + ++ G S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRTAEGEE-FTAGQNISVEIFAEVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG +G RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHLGDERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA + I V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGATGGNLI-VKPAVKA 209
>gi|261367803|ref|ZP_05980686.1| 50S ribosomal protein L3 [Subdoligranulum variabile DSM 15176]
gi|282570601|gb|EFB76136.1| 50S ribosomal protein L3 [Subdoligranulum variabile DSM 15176]
Length = 210
Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 88/212 (41%), Positives = 123/212 (58%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ G++ +KLGMT +++ G+ +PVT++ C VV +T++ +GY AVQ+G GE K
Sbjct: 1 MQKGIIGKKLGMTQLFDANGKVVPVTIIEAGPCTVVQKKTVESDGYQAVQMGYGEVSAKK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+K +G F +V+PK+ L EFR L VG + F G VDV G + GKG+
Sbjct: 61 VNKAAKGHFDKADVAPKRTLREFRFDDIAS-LNVGDILKADVFAEGDKVDVVGTSKGKGY 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR LR +HG R GS G P RVFK K++ G MG RVTV+NL VV
Sbjct: 120 QGVIKRFGQHRLRESHGTGPVARHAGSNGSTSTPSRVFKGKRLPGHMGAVRVTVQNLSVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + LI +KG +PG K S + + DS K+
Sbjct: 180 KVDAENNLIAIKGAIPGP-KGSVVTIHDSVKA 210
>gi|188535279|ref|YP_001909076.1| 50S ribosomal protein L3 [Erwinia tasmaniensis Et1/99]
gi|226725174|sp|B2VK65|RL3_ERWT9 RecName: Full=50S ribosomal protein L3
gi|188030321|emb|CAO98210.1| 50S ribosomal protein L3 [Erwinia tasmaniensis Et1/99]
Length = 209
Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 93/211 (44%), Positives = 132/211 (62%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V + L+ +GY A+QV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKGLENDGYTAIQVTTGAKKASRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR + + VG + F + VDVTG + GKGF+
Sbjct: 61 TKPAAGHFAKAGVEAGRGLWEFRTAEGAE-FTVGQSINVDIFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA S ++V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209
>gi|312880372|ref|ZP_07740172.1| LSU ribosomal protein L3P [Aminomonas paucivorans DSM 12260]
gi|310783663|gb|EFQ24061.1| LSU ribosomal protein L3P [Aminomonas paucivorans DSM 12260]
Length = 209
Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 99/209 (47%), Positives = 138/209 (66%), Gaps = 2/209 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V++ EG+ +PVTV+ C VV RT DKN Y AVQ+G G+ K +
Sbjct: 1 MSMGILGRKVGMTQVFDAEGKAVPVTVIEAGPCPVVEVRTPDKNQYSAVQLGFGDVKPQR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP+RG+++ +V+PK+ L EFRV++ G F G+ VDV G++ GKGF
Sbjct: 61 LNKPVRGYYAKQDVAPKRWLREFRVEEG-HGFDKGQEVRADLFAEGETVDVIGVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR +FGG A+HG S HR GS+G PG +FK K M GRMGG RVTVKNL V
Sbjct: 120 AGVIKRFHFGGGPASHGASKFHRQPGSSGASSYPGHIFKGKTMPGRMGGERVTVKNLRVF 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
+VD + LIL++G VPGA K+ +L+R +
Sbjct: 180 AVDVENNLILLRGAVPGA-KDGLVLIRKT 207
>gi|238916265|ref|YP_002929782.1| large subunit ribosomal protein L3 [Eubacterium eligens ATCC 27750]
gi|259647745|sp|C4Z2T0|RL3_EUBE2 RecName: Full=50S ribosomal protein L3
gi|238871625|gb|ACR71335.1| large subunit ribosomal protein L3 [Eubacterium eligens ATCC 27750]
Length = 211
Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 89/214 (41%), Positives = 123/214 (57%), Gaps = 3/214 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++A K+GMT ++N +G PVTVL C V +T++ +GY AVQVG + + K
Sbjct: 1 MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQVKTVENDGYDAVQVGFADIREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP++G F V K+ L EF+ ++ V F G VD T ++ GKGF
Sbjct: 61 VNKPVKGHFDKAEVPYKRFLREFK-FENASEYSVKDEIKADIFAAGDKVDATAISKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KR HG S HR GS G PGRVFK K M G MG R+T++NLEVV
Sbjct: 120 QGAIKRLGQSRGPMAHG-SKFHRHQGSNGSATTPGRVFKGKGMPGHMGSKRITIQNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VD + +ILVKG VPG KK S + ++++ K+A
Sbjct: 179 RVDVENNVILVKGAVPGPKK-SLVTLKETVKAAK 211
>gi|148260939|ref|YP_001235066.1| 50S ribosomal protein L3 [Acidiphilium cryptum JF-5]
gi|212288245|sp|A5FZW5|RL3_ACICJ RecName: Full=50S ribosomal protein L3
gi|146402620|gb|ABQ31147.1| LSU ribosomal protein L3P [Acidiphilium cryptum JF-5]
Length = 227
Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 124/216 (57%), Positives = 164/216 (75%), Gaps = 2/216 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+G++A+KLGMT ++ +G +PVTVLH+D+ +VV RT +++GY AVQ+G G AK KN
Sbjct: 4 MRTGIIAKKLGMTRLFREDGTHVPVTVLHMDDVRVVAARTKERDGYAAVQLGFGHAKTKN 63
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KPM+G F++ V P +L EFRV DD +L G V S ++FTVGQ VDV G++ GKGF
Sbjct: 64 VTKPMKGHFAAAKVEPANRLVEFRV-ADDAVLEAGQVLSAAHFTVGQKVDVAGISKGKGF 122
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR NF GL A+HGVSISHRS GSTG RQDPG+ FKNKKMAG +GG R+T NLEV
Sbjct: 123 AGGMKRWNFRGLEASHGVSISHRSLGSTGNRQDPGKTFKNKKMAGHLGGERITTLNLEVA 182
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
++D+ R LI++KG VPGA K+ ++LVRD+ K+A
Sbjct: 183 AIDEARNLIMIKGAVPGA-KDGYVLVRDAVKTARPA 217
>gi|50843318|ref|YP_056545.1| 50S ribosomal protein L3 [Propionibacterium acnes KPA171202]
gi|289427657|ref|ZP_06429369.1| 50S ribosomal protein L3 [Propionibacterium acnes J165]
gi|295131387|ref|YP_003582050.1| 50S ribosomal protein L3 [Propionibacterium acnes SK137]
gi|81826389|sp|Q6A6M6|RL3_PROAC RecName: Full=50S ribosomal protein L3
gi|50840920|gb|AAT83587.1| 50S ribosomal protein L3 [Propionibacterium acnes KPA171202]
gi|289159148|gb|EFD07340.1| 50S ribosomal protein L3 [Propionibacterium acnes J165]
gi|291377388|gb|ADE01243.1| 50S ribosomal protein L3 [Propionibacterium acnes SK137]
gi|313773097|gb|EFS39063.1| 50S ribosomal protein L3 [Propionibacterium acnes HL074PA1]
gi|313808839|gb|EFS47293.1| 50S ribosomal protein L3 [Propionibacterium acnes HL087PA2]
gi|313810367|gb|EFS48081.1| 50S ribosomal protein L3 [Propionibacterium acnes HL083PA1]
gi|313812297|gb|EFS50011.1| 50S ribosomal protein L3 [Propionibacterium acnes HL025PA1]
gi|313818019|gb|EFS55733.1| 50S ribosomal protein L3 [Propionibacterium acnes HL046PA2]
gi|313819932|gb|EFS57646.1| 50S ribosomal protein L3 [Propionibacterium acnes HL036PA1]
gi|313823422|gb|EFS61136.1| 50S ribosomal protein L3 [Propionibacterium acnes HL036PA2]
gi|313824894|gb|EFS62608.1| 50S ribosomal protein L3 [Propionibacterium acnes HL063PA1]
gi|313830136|gb|EFS67850.1| 50S ribosomal protein L3 [Propionibacterium acnes HL007PA1]
gi|313832593|gb|EFS70307.1| 50S ribosomal protein L3 [Propionibacterium acnes HL056PA1]
gi|314925788|gb|EFS89619.1| 50S ribosomal protein L3 [Propionibacterium acnes HL036PA3]
gi|314960868|gb|EFT04969.1| 50S ribosomal protein L3 [Propionibacterium acnes HL002PA2]
gi|314973015|gb|EFT17111.1| 50S ribosomal protein L3 [Propionibacterium acnes HL053PA1]
gi|314975511|gb|EFT19606.1| 50S ribosomal protein L3 [Propionibacterium acnes HL045PA1]
gi|314979747|gb|EFT23841.1| 50S ribosomal protein L3 [Propionibacterium acnes HL072PA2]
gi|314986053|gb|EFT30145.1| 50S ribosomal protein L3 [Propionibacterium acnes HL005PA2]
gi|314988669|gb|EFT32760.1| 50S ribosomal protein L3 [Propionibacterium acnes HL005PA3]
gi|315079850|gb|EFT51826.1| 50S ribosomal protein L3 [Propionibacterium acnes HL078PA1]
gi|315083218|gb|EFT55194.1| 50S ribosomal protein L3 [Propionibacterium acnes HL027PA2]
gi|315086828|gb|EFT58804.1| 50S ribosomal protein L3 [Propionibacterium acnes HL002PA3]
gi|315089921|gb|EFT61897.1| 50S ribosomal protein L3 [Propionibacterium acnes HL072PA1]
gi|315096757|gb|EFT68733.1| 50S ribosomal protein L3 [Propionibacterium acnes HL038PA1]
gi|315106073|gb|EFT78049.1| 50S ribosomal protein L3 [Propionibacterium acnes HL030PA1]
gi|327325171|gb|EGE66977.1| 50S ribosomal protein L3 [Propionibacterium acnes HL096PA3]
gi|327325199|gb|EGE67004.1| 50S ribosomal protein L3 [Propionibacterium acnes HL096PA2]
gi|327444000|gb|EGE90654.1| 50S ribosomal protein L3 [Propionibacterium acnes HL043PA1]
gi|327449372|gb|EGE96026.1| 50S ribosomal protein L3 [Propionibacterium acnes HL013PA2]
gi|327449400|gb|EGE96054.1| 50S ribosomal protein L3 [Propionibacterium acnes HL043PA2]
gi|328756283|gb|EGF69899.1| 50S ribosomal protein L3 [Propionibacterium acnes HL020PA1]
gi|328761383|gb|EGF74910.1| 50S ribosomal protein L3 [Propionibacterium acnes HL099PA1]
Length = 223
Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 102/213 (47%), Positives = 131/213 (61%), Gaps = 2/213 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
GV+ KLGMT +++ R +PVTV+ C V RT + +GY AVQ+G G K KNV+
Sbjct: 8 KGVLGTKLGMTQLWDEHNRLVPVTVIQAGPCVVTQVRTPETDGYSAVQLGYGAVKAKNVT 67
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP G F V+P++ L E R D +G + F+ VDVTG + GKG +G
Sbjct: 68 KPEAGHFEKAGVTPRRHLVELR-TADASEYTLGQEIAADVFSESDFVDVTGTSKGKGTAG 126
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH FGGLRATHGV HRS GS G PG+V K +MAGRMG RVTV+NL+V SV
Sbjct: 127 VMKRHGFGGLRATHGVHRKHRSPGSIGGCSTPGKVIKGLRMAGRMGVERVTVQNLQVHSV 186
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D +RG++LV+G VPG K S ++VR + K A
Sbjct: 187 DAERGIMLVRGAVPGP-KGSLLVVRSAAKKAAK 218
>gi|260599639|ref|YP_003212210.1| 50S ribosomal protein L3 [Cronobacter turicensis z3032]
gi|260218816|emb|CBA34171.1| 50S ribosomal protein L3 [Cronobacter turicensis z3032]
Length = 209
Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 97/211 (45%), Positives = 132/211 (62%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ EG IPVTV+ ++ +V + L +GY AVQV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEEGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR+ D + VG S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRL-ADGEEFTVGQSISVELFAEVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA S ++V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209
>gi|227115272|ref|ZP_03828928.1| 50S ribosomal protein L3 [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 209
Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 94/211 (44%), Positives = 131/211 (62%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY A QV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLANDGYRAAQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L EFR+ + ++ VG S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRTLREFRLSEGEE-FTVGQSISVEIFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA S ++V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209
>gi|217976767|ref|YP_002360914.1| 50S ribosomal protein L3 [Methylocella silvestris BL2]
gi|254803683|sp|B8ELG3|RL3_METSB RecName: Full=50S ribosomal protein L3
gi|217502143|gb|ACK49552.1| ribosomal protein L3 [Methylocella silvestris BL2]
Length = 245
Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 140/219 (63%), Positives = 164/219 (74%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+KLGMT V+N G +PVTVL LD CQVV HRT ++NGY A+Q+G G AKVKN
Sbjct: 1 MRSGVIAQKLGMTRVFNDGGEHVPVTVLKLDGCQVVAHRTKERNGYTALQLGIGRAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VSK RG F+ V PK KL EFRV++ D LLPVG+ + +F VGQ VDVTG +IGKGF
Sbjct: 61 VSKAERGRFAIAEVEPKLKLAEFRVEESD-LLPVGAEITADHFVVGQFVDVTGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR NFGGLRATHGVS+SHRSHGSTG RQDPG+ FKNKKMAG MG RVT NL+VV
Sbjct: 120 AGPMKRWNFGGLRATHGVSLSHRSHGSTGGRQDPGKTFKNKKMAGHMGAERVTTLNLKVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
+D +RGLILV+G VPG WI VRD+ K A+
Sbjct: 180 QLDIERGLILVEGAVPGVA-GGWIQVRDAIKRALPKDAP 217
>gi|270264373|ref|ZP_06192639.1| 50S ribosomal protein L3 [Serratia odorifera 4Rx13]
gi|270041509|gb|EFA14607.1| 50S ribosomal protein L3 [Serratia odorifera 4Rx13]
Length = 209
Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 94/211 (44%), Positives = 130/211 (61%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY AVQV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLANDGYRAVQVTTGSKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR+ + ++ G S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRLAEGEE-FTAGQNISVEIFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG +G RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGHLGDERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA + I V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGATGGNLI-VKPAVKA 209
>gi|240850835|ref|YP_002972235.1| 50S ribosomal protein L3 [Bartonella grahamii as4aup]
gi|240267958|gb|ACS51546.1| 50S ribosomal protein L3 [Bartonella grahamii as4aup]
Length = 245
Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 133/219 (60%), Positives = 164/219 (74%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+KLGMT +YN G +PVTVL L+NCQVV RT++KNGY AVQ+G G AKVKN
Sbjct: 1 MRSGVIAQKLGMTRIYNDAGEHVPVTVLRLENCQVVAQRTVEKNGYTAVQLGVGFAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
S+ +RG F+ +V PK K+ EFRV D+LL VG+ + +F GQ VDVTG +IGKGF
Sbjct: 61 TSQALRGHFAKASVEPKAKIAEFRVSP-DNLLDVGTEITVEHFVPGQRVDVTGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKRHNFGG RA+HG SI+HR+HGSTG QDPG+VFK KKMAG MG RVT +N+EV+
Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGQVRVTTQNIEVI 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
S D +RGLILV+G V G+ K SWILVRD+ K +
Sbjct: 180 STDSERGLILVRGAVSGS-KGSWILVRDAVKKRLPDNAP 217
>gi|310659502|ref|YP_003937223.1| 50S ribosomal protein L3 [Clostridium sticklandii DSM 519]
gi|308826280|emb|CBH22318.1| 50S ribosomal subunit protein L3 [Clostridium sticklandii]
Length = 208
Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 94/211 (44%), Positives = 123/211 (58%), Gaps = 3/211 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
V+ RKLGMT V+ +GR +PVTV+ V + + +GY AVQV GE K K V
Sbjct: 1 MKAVLGRKLGMTQVFAEDGRLVPVTVIEAGPMVVTQIKNKETDGYEAVQVAFGEVKEKRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+RG F+ V KK + EF+V +D + F G+ VD G + GKGF
Sbjct: 61 NKPLRGHFAKAGVGFKKFVREFKV-EDLSAYSLAQEIKVDVFEAGEKVDAIGTSKGKGFQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRHN THG S HR GS G DP RVFK KK+AG MG RVT++NLEVV
Sbjct: 120 GPIKRHNQSRGPMTHG-SRYHRGPGSMGAASDPSRVFKGKKLAGHMGAERVTIQNLEVVK 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD ++ LIL+KG VPG KK ++++ + K
Sbjct: 179 VDVEKNLILIKGAVPGPKKG-LVVIKKAIKG 208
>gi|251793827|ref|YP_003008559.1| 50S ribosomal protein L3 [Aggregatibacter aphrophilus NJ8700]
gi|247535226|gb|ACS98472.1| ribosomal protein L3 [Aggregatibacter aphrophilus NJ8700]
Length = 208
Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 97/211 (45%), Positives = 132/211 (62%), Gaps = 3/211 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V RK+GMT ++N +G +PVTV+ ++ +V +TL+ +GY AVQV G K V
Sbjct: 1 MIGLVGRKVGMTRIFNEDGVSVPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKASRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F V + L+EFR + ++ +G + F + VDVTG + GKGF
Sbjct: 61 TKPEVGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFADVKKVDVTGTSKGKGFQ 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV
Sbjct: 119 GGVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVR 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA S ++V+ + K+
Sbjct: 179 VDAERKLLLVKGAVPGA-TGSDVIVKPAVKA 208
>gi|259909999|ref|YP_002650355.1| 50S ribosomal protein L3 [Erwinia pyrifoliae Ep1/96]
gi|292489849|ref|YP_003532739.1| 50S ribosomal protein L3 [Erwinia amylovora CFBP1430]
gi|292900891|ref|YP_003540260.1| 50S ribosomal protein L3 [Erwinia amylovora ATCC 49946]
gi|224965621|emb|CAX57153.1| 50S ribosomal protein L3 [Erwinia pyrifoliae Ep1/96]
gi|283480096|emb|CAY76012.1| 50S ribosomal protein L3 [Erwinia pyrifoliae DSM 12163]
gi|291200739|emb|CBJ47872.1| 50S ribosomal subunit protein L3 [Erwinia amylovora ATCC 49946]
gi|291555286|emb|CBA23589.1| 50S ribosomal protein L3 [Erwinia amylovora CFBP1430]
gi|310765598|gb|ADP10548.1| 50S ribosomal protein L3 [Erwinia sp. Ejp617]
gi|312174031|emb|CBX82284.1| 50S ribosomal protein L3 [Erwinia amylovora ATCC BAA-2158]
Length = 209
Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 93/211 (44%), Positives = 132/211 (62%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V + L+ +GY A+QV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKGLENDGYTAIQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR + + VG + F + VDVTG + GKGF+
Sbjct: 61 TKPAAGHFAKAGVEAGRGLWEFRTAEGAE-FTVGQSINVDIFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA S ++V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209
>gi|83648852|ref|YP_437287.1| ribosomal protein L3 [Hahella chejuensis KCTC 2396]
gi|109893432|sp|Q2S912|RL3_HAHCH RecName: Full=50S ribosomal protein L3
gi|83636895|gb|ABC32862.1| Ribosomal protein L3 [Hahella chejuensis KCTC 2396]
Length = 212
Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 93/213 (43%), Positives = 135/213 (63%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK GMT ++ +G +PVTV+ ++ + ++L+ +GY A+QV +G K
Sbjct: 1 MAIGLVGRKAGMTRLFEDDGAAVPVTVIQVEKNVIAQVKSLEVDGYRAIQVTSGSVKASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDD-LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KPM G F+ V + + EF + D VG S + F GQ VDV+G + GKG
Sbjct: 61 VNKPMAGHFAKAGVEAGRVVCEFTLDATDSAEYKVGDEVSVTIFEAGQKVDVSGRSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G +KR NF ATHG S+SHR+ GS G Q PGRVFK KKMAG+MG VTV+ L+V
Sbjct: 121 FAGVIKRWNFSTQDATHGNSLSHRAPGSIGQNQSPGRVFKGKKMAGQMGNKNVTVQTLKV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD+++GL+L+KG VPGA + ++++ + K+
Sbjct: 181 VRVDEEKGLLLIKGAVPGA-TGADVVIKPAVKA 212
>gi|241759650|ref|ZP_04757751.1| 50S ribosomal protein L3 [Neisseria flavescens SK114]
gi|241320022|gb|EER56403.1| 50S ribosomal protein L3 [Neisseria flavescens SK114]
Length = 214
Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats.
Identities = 104/212 (49%), Positives = 135/212 (63%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K
Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+K G F+ V + L EF + ++ L G + S F VGQLVDVTG + GKG
Sbjct: 61 VNKTEAGHFAKAGVEAGRGLVEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
FSG +KRHNFG RA+HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEV
Sbjct: 121 FSGTIKRHNFGAQRASHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
V VD +R L+LVKG VPG+ NS ++VR S K
Sbjct: 181 VRVDAERQLLLVKGAVPGSV-NSDVVVRPSVK 211
>gi|261823232|ref|YP_003261338.1| 50S ribosomal protein L3 [Pectobacterium wasabiae WPP163]
gi|261607245|gb|ACX89731.1| 50S ribosomal protein L3 [Pectobacterium wasabiae WPP163]
Length = 209
Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats.
Identities = 94/211 (44%), Positives = 132/211 (62%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY AVQV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLANDGYRAVQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L EFR+ + ++ +G S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRTLREFRLSEGEE-FTIGQSISVEIFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA S ++V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209
>gi|283788044|ref|YP_003367909.1| 50S ribosomal subunit protein L3 [Citrobacter rodentium ICC168]
gi|282951498|emb|CBG91197.1| 50S ribosomal subunit protein L3 [Citrobacter rodentium ICC168]
Length = 209
Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats.
Identities = 94/211 (44%), Positives = 132/211 (62%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V + L GY A+QV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANEGYRAIQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRLAEGEE-FTVGQSISVELFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA S ++V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209
>gi|308446847|ref|XP_003087274.1| hypothetical protein CRE_26933 [Caenorhabditis remanei]
gi|308258134|gb|EFP02087.1| hypothetical protein CRE_26933 [Caenorhabditis remanei]
Length = 218
Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats.
Identities = 94/211 (44%), Positives = 131/211 (62%), Gaps = 1/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT V++ G+ +PVTV+ + V RT + +GY AVQ+ AG+ + V+
Sbjct: 9 KGLLGTKLGMTQVWDENGKVVPVTVIEVAPNVVTQIRTAEVDGYSAVQIAAGQIDPRKVN 68
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
+P G F+ V+P++ L E R D + F GQ +DV G + GKGF+G
Sbjct: 69 QPTAGHFAKAGVTPRRHLTEVRTADAADYSLGQELTIDGTFEAGQKIDVVGTSKGKGFAG 128
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRHNF G+ A+HG +HR GS G PGRVFK ++MAGRMGG RVTV+NL V +V
Sbjct: 129 VMKRHNFSGVSASHGAHRNHRKPGSIGGAATPGRVFKGQRMAGRMGGERVTVQNLTVHAV 188
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D ++GLIL+KG VPGA + + VR++ K A
Sbjct: 189 DAEKGLILIKGAVPGA-RGRLVFVRNAVKGA 218
>gi|237747365|ref|ZP_04577845.1| 50S ribosomal protein L3 [Oxalobacter formigenes HOxBLS]
gi|229378716|gb|EEO28807.1| 50S ribosomal protein L3 [Oxalobacter formigenes HOxBLS]
Length = 222
Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats.
Identities = 96/216 (44%), Positives = 133/216 (61%), Gaps = 2/216 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GM ++ EG IPVTV+ + + +V +T + +GY AVQV G+ +
Sbjct: 5 MSLGLIGRKVGMMRIFTDEGDSIPVTVVDVSDNRVTQVKTTETDGYAAVQVAFGKRRPSR 64
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+K G ++ V L EFRV + G V + F VGQ +DV G++IGKG
Sbjct: 65 VNKAAAGHYAKAGVEAGTVLREFRVDATKAAEMKAGDVVPVTLFEVGQKIDVQGVSIGKG 124
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KRHNFG RATHG S+SH GS G QDPGRVF KKM G MG TV+NLE+
Sbjct: 125 YAGTIKRHNFGSGRATHGNSLSHNVPGSIGMNQDPGRVFPGKKMTGHMGDETRTVQNLEI 184
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
+D +R L+LVKG VPGA KN+ ++V + K+ V+
Sbjct: 185 ARIDAERNLLLVKGAVPGA-KNAQVVVCPAVKTKVS 219
>gi|148827966|ref|YP_001292719.1| 50S ribosomal protein L3 [Haemophilus influenzae PittGG]
gi|166233148|sp|A5UHT0|RL3_HAEIG RecName: Full=50S ribosomal protein L3
gi|148719208|gb|ABR00336.1| 50S ribosomal protein L3 [Haemophilus influenzae PittGG]
Length = 208
Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats.
Identities = 96/211 (45%), Positives = 132/211 (62%), Gaps = 3/211 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V RK+GMT ++N +G +PVTV+ ++ +V +TL+ +GY AVQV G K V
Sbjct: 1 MIGLVGRKVGMTRIFNEDGVSVPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F V + L+EFR + ++ +G + F + VDVTG + GKGF
Sbjct: 61 TKPEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFADVKKVDVTGTSKGKGFQ 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G RVTV++LEVV
Sbjct: 119 GGVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKKMAGHLGAERVTVQSLEVVR 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA + ++V+ + K+
Sbjct: 179 VDAERKLLLVKGSVPGAINGN-VIVKPAVKA 208
>gi|148652238|ref|YP_001279331.1| 50S ribosomal protein L3 [Psychrobacter sp. PRwf-1]
gi|172048471|sp|A5WCJ0|RL3_PSYWF RecName: Full=50S ribosomal protein L3
gi|148571322|gb|ABQ93381.1| LSU ribosomal protein L3P [Psychrobacter sp. PRwf-1]
Length = 212
Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats.
Identities = 98/213 (46%), Positives = 136/213 (63%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V +K GMT V+ G IPVTV+ +D ++ +T D +GY A+Q+ GE +
Sbjct: 1 MAIGLVGKKCGMTRVFTETGASIPVTVVEVDANRITQIKTNDTDGYQAIQITTGERRDSR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+ +G F+ V + ++EFRV +++ + GS + F GQLVDVTG + GKG
Sbjct: 61 VTAAQKGHFAKAGVKAGRGVWEFRVTEEELEGREAGSEIAADLFEAGQLVDVTGQSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KRHNF ATHG S+SHR GSTG Q PG+VFK KKM G+MG RVTV+ LEV
Sbjct: 121 FQGGVKRHNFSMQDATHGNSVSHRVLGSTGQNQSPGKVFKGKKMPGQMGNKRVTVQGLEV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VSVD ++GL+++KG +PGA ++VR S K+
Sbjct: 181 VSVDAEKGLLVIKGAIPGA-NGGDVIVRPSIKA 212
>gi|313816574|gb|EFS54288.1| 50S ribosomal protein L3 [Propionibacterium acnes HL059PA1]
gi|315097985|gb|EFT69961.1| 50S ribosomal protein L3 [Propionibacterium acnes HL059PA2]
Length = 223
Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats.
Identities = 101/213 (47%), Positives = 130/213 (61%), Gaps = 2/213 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
GV+ KLGMT +++ R +PVTV+ C V RT + +GY AVQ+G G K KNV+
Sbjct: 8 KGVLGTKLGMTQLWDEHNRLVPVTVIQAGPCVVTQVRTPETDGYSAVQLGYGAVKAKNVT 67
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP G F V+P++ L E R D +G + F+ VDVT + GKG +G
Sbjct: 68 KPEAGHFEKAGVTPRRHLVELR-TADASEYALGQEIAADVFSESDFVDVTATSKGKGTAG 126
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH FGGLRATHGV HRS GS G PG+V K +MAGRMG RVTV+NL+V SV
Sbjct: 127 VMKRHGFGGLRATHGVHRKHRSPGSIGGCSTPGKVIKGLRMAGRMGVERVTVQNLQVHSV 186
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D +RG++LV+G VPG K S ++VR + K A
Sbjct: 187 DAERGIMLVRGAVPGP-KGSLLVVRSAAKKAAK 218
>gi|260579267|ref|ZP_05847151.1| 50S ribosomal protein L3 [Corynebacterium jeikeium ATCC 43734]
gi|258602619|gb|EEW15912.1| 50S ribosomal protein L3 [Corynebacterium jeikeium ATCC 43734]
Length = 218
Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats.
Identities = 91/214 (42%), Positives = 125/214 (58%), Gaps = 2/214 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ +KLGMT +++ E R +PVTV+ C V RT + +GY AVQ+ GE + V+
Sbjct: 7 KGILGKKLGMTQIFDEENRVVPVTVVEAGPCVVTQVRTKETDGYEAVQIAFGEIDPRKVN 66
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP G F V+P++ + E RV D VG + F + VDVTG T GKG++G
Sbjct: 67 KPAAGHFKKAGVTPRRHVAEIRV-ADASSYEVGQDVTVDIFNDVKFVDVTGTTKGKGYAG 125
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F G A HG +HR GS G PGRVFK K+MAGRMG +RVT +NL+V V
Sbjct: 126 GMKRHGFAGQGAAHGNQAAHRRVGSIGQAATPGRVFKGKRMAGRMGNDRVTQQNLKVAKV 185
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
D + L+L+KG VPG ++V+ + K +
Sbjct: 186 DAESNLLLIKGAVPG-VNGGLVVVKTAVKGGAHA 218
>gi|327332709|gb|EGE74443.1| 50S ribosomal protein L3 [Propionibacterium acnes HL097PA1]
Length = 223
Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats.
Identities = 102/213 (47%), Positives = 131/213 (61%), Gaps = 2/213 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
GV+ KLGMT +++ R +PVTV+ C V RT + +GY AVQ+G G K KNV+
Sbjct: 8 KGVLGTKLGMTQLWDEHNRLVPVTVIQAGPCVVTQVRTSETDGYSAVQLGYGAVKAKNVT 67
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP G F V+P++ L E R D +G + F+ VDVTG + GKG +G
Sbjct: 68 KPEAGHFEKAGVTPRRHLVELR-TADASEYTLGQEIAADVFSESDFVDVTGTSKGKGTAG 126
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH FGGLRATHGV HRS GS G PG+V K +MAGRMG RVTV+NL+V SV
Sbjct: 127 VMKRHGFGGLRATHGVHRKHRSPGSIGGCSTPGKVIKGLRMAGRMGVERVTVQNLQVHSV 186
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D +RG++LV+G VPG K S ++VR + K A
Sbjct: 187 DAERGIMLVRGAVPGP-KGSLLVVRSAAKKAAK 218
>gi|227328949|ref|ZP_03832973.1| 50S ribosomal protein L3 [Pectobacterium carotovorum subsp.
carotovorum WPP14]
gi|253690183|ref|YP_003019373.1| ribosomal protein L3 [Pectobacterium carotovorum subsp. carotovorum
PC1]
gi|259709730|sp|C6DG74|RL3_PECCP RecName: Full=50S ribosomal protein L3
gi|251756761|gb|ACT14837.1| ribosomal protein L3 [Pectobacterium carotovorum subsp. carotovorum
PC1]
Length = 209
Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats.
Identities = 95/211 (45%), Positives = 132/211 (62%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY AVQV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEIEANRVTQVKDLANDGYRAVQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L EFR+ + ++ VG S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRTLREFRLSEGEE-FTVGQSISVEIFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA S ++V+ + K+
Sbjct: 180 VDAERNLLLVKGAVPGA-TGSDLIVKPAVKA 209
>gi|117927515|ref|YP_872066.1| 50S ribosomal protein L3P [Acidothermus cellulolyticus 11B]
gi|212288244|sp|A0LRM0|RL3_ACIC1 RecName: Full=50S ribosomal protein L3
gi|117647978|gb|ABK52080.1| LSU ribosomal protein L3P [Acidothermus cellulolyticus 11B]
Length = 222
Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats.
Identities = 100/219 (45%), Positives = 130/219 (59%), Gaps = 2/219 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT V++ GR IPVTV+ C V RT D++GY AVQ+G G + V+
Sbjct: 6 KGLLGEKLGMTQVFDESGRVIPVTVVRAGPCVVTQVRTPDRDGYSAVQLGYGAVDPRRVN 65
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP+ G F + V+P++ L E R D VG + FT GQ VDV G++ GKGF+G
Sbjct: 66 KPLAGHFRAAGVTPRRYLAEVR-TGDAAEYTVGQEVTVEIFTPGQRVDVAGVSKGKGFAG 124
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRHNF GL +HG HRS GS G PGRVFK +MAGRMGG RVTV+NL V +V
Sbjct: 125 LMKRHNFRGLPDSHGTERKHRSPGSIGACATPGRVFKGLRMAGRMGGRRVTVQNLAVQAV 184
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
+ L+L++G VPG + VR + K N G +
Sbjct: 185 KPEENLLLLQGAVPGP-NGGLVYVRTAAKGKANRDGGAA 222
>gi|282855208|ref|ZP_06264540.1| 50S ribosomal protein L3 [Propionibacterium acnes J139]
gi|282581796|gb|EFB87181.1| 50S ribosomal protein L3 [Propionibacterium acnes J139]
gi|314924185|gb|EFS88016.1| 50S ribosomal protein L3 [Propionibacterium acnes HL001PA1]
gi|314965095|gb|EFT09194.1| 50S ribosomal protein L3 [Propionibacterium acnes HL082PA2]
gi|314982251|gb|EFT26344.1| 50S ribosomal protein L3 [Propionibacterium acnes HL110PA3]
gi|315090438|gb|EFT62414.1| 50S ribosomal protein L3 [Propionibacterium acnes HL110PA4]
gi|315093673|gb|EFT65649.1| 50S ribosomal protein L3 [Propionibacterium acnes HL060PA1]
gi|315103967|gb|EFT75943.1| 50S ribosomal protein L3 [Propionibacterium acnes HL050PA2]
gi|327326712|gb|EGE68498.1| 50S ribosomal protein L3 [Propionibacterium acnes HL103PA1]
Length = 223
Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats.
Identities = 101/213 (47%), Positives = 130/213 (61%), Gaps = 2/213 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
GV+ KLGMT +++ R +PVTV+ C V RT + +GY AVQ+G G K K V+
Sbjct: 8 KGVLGTKLGMTQLWDEHNRLVPVTVIQAGPCVVTQVRTPETDGYSAVQLGYGAVKAKKVT 67
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP G F V+P++ L E R D +G + F+ VDVTG + GKG +G
Sbjct: 68 KPEAGHFEKAGVTPRRHLVELR-TADASEYTLGQEIAADVFSESDFVDVTGTSKGKGTAG 126
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH FGGLRATHGV HRS GS G PG+V K +MAGRMG RVTV+NL+V SV
Sbjct: 127 VMKRHGFGGLRATHGVHRKHRSPGSIGGCSTPGKVIKGLRMAGRMGVERVTVQNLQVHSV 186
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D +RG++LV+G VPG K S ++VR + K A
Sbjct: 187 DAERGIMLVRGAVPGP-KGSLLVVRSAAKKAAK 218
>gi|289424800|ref|ZP_06426582.1| 50S ribosomal protein L3 [Propionibacterium acnes SK187]
gi|289154763|gb|EFD03446.1| 50S ribosomal protein L3 [Propionibacterium acnes SK187]
gi|313763238|gb|EFS34602.1| 50S ribosomal protein L3 [Propionibacterium acnes HL013PA1]
gi|313793258|gb|EFS41316.1| 50S ribosomal protein L3 [Propionibacterium acnes HL110PA1]
gi|313801098|gb|EFS42366.1| 50S ribosomal protein L3 [Propionibacterium acnes HL110PA2]
gi|313828364|gb|EFS66078.1| 50S ribosomal protein L3 [Propionibacterium acnes HL063PA2]
gi|313837949|gb|EFS75663.1| 50S ribosomal protein L3 [Propionibacterium acnes HL086PA1]
gi|314914332|gb|EFS78163.1| 50S ribosomal protein L3 [Propionibacterium acnes HL005PA4]
gi|314917652|gb|EFS81483.1| 50S ribosomal protein L3 [Propionibacterium acnes HL050PA1]
gi|314919616|gb|EFS83447.1| 50S ribosomal protein L3 [Propionibacterium acnes HL050PA3]
gi|314930207|gb|EFS94038.1| 50S ribosomal protein L3 [Propionibacterium acnes HL067PA1]
gi|314957186|gb|EFT01290.1| 50S ribosomal protein L3 [Propionibacterium acnes HL027PA1]
gi|314957762|gb|EFT01865.1| 50S ribosomal protein L3 [Propionibacterium acnes HL002PA1]
gi|314963542|gb|EFT07642.1| 50S ribosomal protein L3 [Propionibacterium acnes HL082PA1]
gi|314969875|gb|EFT13973.1| 50S ribosomal protein L3 [Propionibacterium acnes HL037PA1]
gi|315077165|gb|EFT49232.1| 50S ribosomal protein L3 [Propionibacterium acnes HL053PA2]
gi|315100628|gb|EFT72604.1| 50S ribosomal protein L3 [Propionibacterium acnes HL046PA1]
gi|315109232|gb|EFT81208.1| 50S ribosomal protein L3 [Propionibacterium acnes HL030PA2]
gi|327451421|gb|EGE98075.1| 50S ribosomal protein L3 [Propionibacterium acnes HL087PA3]
gi|327451604|gb|EGE98258.1| 50S ribosomal protein L3 [Propionibacterium acnes HL092PA1]
gi|327451891|gb|EGE98545.1| 50S ribosomal protein L3 [Propionibacterium acnes HL083PA2]
gi|328752105|gb|EGF65721.1| 50S ribosomal protein L3 [Propionibacterium acnes HL087PA1]
gi|328755499|gb|EGF69115.1| 50S ribosomal protein L3 [Propionibacterium acnes HL025PA2]
Length = 223
Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats.
Identities = 101/213 (47%), Positives = 130/213 (61%), Gaps = 2/213 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
GV+ KLGMT +++ R +PVTV+ C V RT + +GY AVQ+G G K KNV+
Sbjct: 8 KGVLGTKLGMTQLWDEHNRLVPVTVIQAGPCVVTQVRTPETDGYSAVQLGYGAVKAKNVT 67
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP G F V+P++ L E R D +G + F+ VDVT + GKG +G
Sbjct: 68 KPEAGHFEKAGVTPRRHLVELR-TADASEYTLGQEIAADVFSESDFVDVTATSKGKGTAG 126
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH FGGLRATHGV HRS GS G PG+V K +MAGRMG RVTV+NL+V SV
Sbjct: 127 VMKRHGFGGLRATHGVHRKHRSPGSIGGCSTPGKVIKGLRMAGRMGVERVTVQNLQVHSV 186
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D +RG++LV+G VPG K S ++VR + K A
Sbjct: 187 DAERGIMLVRGAVPGP-KGSLLVVRSAAKKAAK 218
>gi|295401920|ref|ZP_06811883.1| 50S ribosomal protein L3 [Geobacillus thermoglucosidasius C56-YS93]
gi|312109261|ref|YP_003987577.1| 50S ribosomal protein L3 [Geobacillus sp. Y4.1MC1]
gi|294976050|gb|EFG51665.1| 50S ribosomal protein L3 [Geobacillus thermoglucosidasius C56-YS93]
gi|311214362|gb|ADP72966.1| 50S ribosomal protein L3 [Geobacillus sp. Y4.1MC1]
Length = 211
Score = 218 bits (555), Expect = 4e-55, Method: Composition-based stats.
Identities = 88/215 (40%), Positives = 128/215 (59%), Gaps = 4/215 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ G IPVTV+ V+ +T++K+GY A+Q+G + K
Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEATPNVVLQKKTIEKDGYEAIQLGFEDLSEKR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP G + N +PK+ + E R D+ VG F+ G +VDVTG++ GKGF
Sbjct: 61 ANKPQIGHAAKANTAPKRFIREIRGANIDE-YEVGQEVKVDIFSEGDIVDVTGISKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH HG S HR GS G P RVFK+K++ GRMGG RVT++NL++V
Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGAIA-PNRVFKSKELPGRMGGQRVTIQNLKIV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
VD +R L+L+KG VPG +K ++V+ + K+
Sbjct: 178 KVDPERNLLLIKGNVPGPRKG-LVIVKSAVKAKAK 211
>gi|186477588|ref|YP_001859058.1| 50S ribosomal protein L3 [Burkholderia phymatum STM815]
gi|226725142|sp|B2JIG6|RL3_BURP8 RecName: Full=50S ribosomal protein L3
gi|184194047|gb|ACC72012.1| ribosomal protein L3 [Burkholderia phymatum STM815]
Length = 219
Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats.
Identities = 95/212 (44%), Positives = 127/212 (59%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G +
Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGTRRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP+ G + V + L EF++ L G+V F VGQ VDV G +IGKG
Sbjct: 61 VTKPLAGHLAKAGVQAGEILKEFQIDAAKAAELSSGAVIGVDLFEVGQKVDVQGTSIGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KR+NF RA+HG S SH GS G QDPGRVF K+M G MG VTV+NLE+
Sbjct: 121 YAGTIKRYNFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+D R L+LVKG VPGA K + V + K
Sbjct: 181 ARIDADRKLLLVKGAVPGA-KGGKVFVTPAVK 211
>gi|78064924|ref|YP_367693.1| 50S ribosomal protein L3 [Burkholderia sp. 383]
gi|109893416|sp|Q39KG7|RL3_BURS3 RecName: Full=50S ribosomal protein L3
gi|77965669|gb|ABB07049.1| LSU ribosomal protein L3P [Burkholderia sp. 383]
Length = 217
Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats.
Identities = 96/214 (44%), Positives = 130/214 (60%), Gaps = 2/214 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G +
Sbjct: 2 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 61
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP+ G + V + L EFR+ L G+V F VGQ VDV G++IGKG
Sbjct: 62 VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAVVGVDLFEVGQKVDVQGVSIGKG 121
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KR+NF RATHG S SH GS G QDPGRVF K+M G MG VTV+NLE+
Sbjct: 122 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 181
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+D +R L+LVKG +PGA K + V + K+
Sbjct: 182 ARIDAERKLLLVKGAIPGA-KGGKVFVTPAVKTK 214
>gi|53720821|ref|YP_109807.1| 50S ribosomal protein L3 [Burkholderia pseudomallei K96243]
gi|53723854|ref|YP_104166.1| 50S ribosomal protein L3 [Burkholderia mallei ATCC 23344]
gi|76808912|ref|YP_335140.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1710b]
gi|121599817|ref|YP_994456.1| 50S ribosomal protein L3 [Burkholderia mallei SAVP1]
gi|124384577|ref|YP_001027895.1| 50S ribosomal protein L3 [Burkholderia mallei NCTC 10229]
gi|126441597|ref|YP_001060750.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 668]
gi|126449489|ref|YP_001082990.1| 50S ribosomal protein L3 [Burkholderia mallei NCTC 10247]
gi|167721577|ref|ZP_02404813.1| 50S ribosomal protein L3 [Burkholderia pseudomallei DM98]
gi|167740551|ref|ZP_02413325.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 14]
gi|167817756|ref|ZP_02449436.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 91]
gi|167826153|ref|ZP_02457624.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 9]
gi|167847665|ref|ZP_02473173.1| 50S ribosomal protein L3 [Burkholderia pseudomallei B7210]
gi|167896237|ref|ZP_02483639.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 7894]
gi|167904619|ref|ZP_02491824.1| 50S ribosomal protein L3 [Burkholderia pseudomallei NCTC 13177]
gi|167912884|ref|ZP_02499975.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 112]
gi|167920844|ref|ZP_02507935.1| 50S ribosomal protein L3 [Burkholderia pseudomallei BCC215]
gi|254180339|ref|ZP_04886937.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1655]
gi|254190302|ref|ZP_04896810.1| 50S ribosomal protein L3 [Burkholderia pseudomallei Pasteur 52237]
gi|81823913|sp|Q62GK5|RL3_BURMA RecName: Full=50S ribosomal protein L3
gi|81824632|sp|Q63Q11|RL3_BURPS RecName: Full=50S ribosomal protein L3
gi|109893415|sp|Q3JMR3|RL3_BURP1 RecName: Full=50S ribosomal protein L3
gi|166233124|sp|A3MRV4|RL3_BURM7 RecName: Full=50S ribosomal protein L3
gi|166233125|sp|A2S7H6|RL3_BURM9 RecName: Full=50S ribosomal protein L3
gi|166233126|sp|A1V8A3|RL3_BURMS RecName: Full=50S ribosomal protein L3
gi|166233127|sp|A3NEH9|RL3_BURP6 RecName: Full=50S ribosomal protein L3
gi|52211235|emb|CAH37224.1| 50S ribosomal protein L3 [Burkholderia pseudomallei K96243]
gi|52427277|gb|AAU47870.1| ribosomal protein L3 [Burkholderia mallei ATCC 23344]
gi|76578365|gb|ABA47840.1| ribosomal protein L3 [Burkholderia pseudomallei 1710b]
gi|121228627|gb|ABM51145.1| 50S ribosomal protein L3 [Burkholderia mallei SAVP1]
gi|124292597|gb|ABN01866.1| 50S ribosomal protein L3 [Burkholderia mallei NCTC 10229]
gi|126221090|gb|ABN84596.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 668]
gi|126242359|gb|ABO05452.1| 50S ribosomal protein L3 [Burkholderia mallei NCTC 10247]
gi|157937978|gb|EDO93648.1| 50S ribosomal protein L3 [Burkholderia pseudomallei Pasteur 52237]
gi|184210878|gb|EDU07921.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1655]
Length = 219
Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats.
Identities = 99/212 (46%), Positives = 132/212 (62%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G +
Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP+ G + V + L EFR++ D L G+V P F VGQ VDV G++IGKG
Sbjct: 61 VTKPLAGHLAKAGVEAGEILKEFRIEADKAAELSNGAVIGPDLFEVGQKVDVQGVSIGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KR+NFG RA+HG S SH GS G QDPGRVF K+M G MG VTV+NLE+
Sbjct: 121 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+D R L+LVKG VPGA K + V + K
Sbjct: 181 ARIDADRKLLLVKGAVPGA-KGGKVFVTPAVK 211
>gi|161506006|ref|YP_001573118.1| 50S ribosomal protein L3 [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|189029478|sp|A9MN46|RL3_SALAR RecName: Full=50S ribosomal protein L3
gi|160867353|gb|ABX23976.1| hypothetical protein SARI_04187 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 209
Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats.
Identities = 95/211 (45%), Positives = 132/211 (62%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY AVQV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGVKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRLAEGEE-YTVGQSISVELFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA ++V+ + K+
Sbjct: 180 VDAERNLLLVKGGVPGA-TGCDLIVKPAVKA 209
>gi|171060669|ref|YP_001793018.1| 50S ribosomal protein L3 [Leptothrix cholodnii SP-6]
gi|212288405|sp|B1Y8I7|RL3_LEPCP RecName: Full=50S ribosomal protein L3
gi|170778114|gb|ACB36253.1| ribosomal protein L3 [Leptothrix cholodnii SP-6]
Length = 226
Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats.
Identities = 97/219 (44%), Positives = 130/219 (59%), Gaps = 2/219 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ RK+GM ++ +G +PVTVL + N +V +T++ +GY AVQV G K V
Sbjct: 9 RLGLLGRKVGMMRIFTDDGDAVPVTVLDVSNNRVAQIKTVETDGYSAVQVAFGARKASRV 68
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP G + V + L EFRV + GS + F GQ VDV G TIGKGF
Sbjct: 69 TKPEAGHLAKAGVESGELLQEFRVSAEVAAECKPGSQLPIAMFQAGQQVDVQGTTIGKGF 128
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KRH+FG RA+HG S SH GS QDPGRVF KKM+G +G + VT +NL+VV
Sbjct: 129 AGTIKRHHFGSQRASHGNSRSHNVPGSISMAQDPGRVFPGKKMSGHLGDDTVTTQNLDVV 188
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
VD+ R L+LVKG VPGA K ++ VR + K +
Sbjct: 189 RVDEARQLLLVKGAVPGA-KGGFVTVRPAVKVKLKKGAN 226
>gi|213964789|ref|ZP_03392988.1| 50S ribosomal protein L3 [Corynebacterium amycolatum SK46]
gi|213952325|gb|EEB63708.1| 50S ribosomal protein L3 [Corynebacterium amycolatum SK46]
Length = 218
Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats.
Identities = 88/214 (41%), Positives = 120/214 (56%), Gaps = 2/214 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT +++ E R +PVTV+ C V RT + +GY AVQ+ GE + V+
Sbjct: 7 KGILGTKLGMTQIFDEENRVVPVTVVEAGPCVVTQVRTKETDGYDAVQIAYGEIDPRKVN 66
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP G F V+P++ E R D VG F + VDVTG + G GF+G
Sbjct: 67 KPEAGHFKKAGVTPRRHSVEIR-TPDASSYEVGQSVGVDIFGEIEYVDVTGTSKGHGFAG 125
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F G A HG +HR G G PGRVFK K+MAGRMG +RVT +NL++ V
Sbjct: 126 GMKRHGFAGQGAAHGNQAAHRRVGGIGACATPGRVFKGKRMAGRMGNDRVTTQNLKIQKV 185
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
D L+L+KG VPGA + ++V+ + K +
Sbjct: 186 DADANLLLIKGAVPGA-RGGLLVVKTATKGGAHA 218
>gi|312795774|ref|YP_004028696.1| LSU ribosomal protein L3P [Burkholderia rhizoxinica HKI 454]
gi|312167549|emb|CBW74552.1| LSU ribosomal protein L3P [Burkholderia rhizoxinica HKI 454]
Length = 247
Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats.
Identities = 97/216 (44%), Positives = 132/216 (61%), Gaps = 2/216 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ +G IPVTVL + + +V +T++ +GY AVQV GE +
Sbjct: 30 MSLGLVGRKVGMTRIFTADGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGERRASR 89
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP+ G + V + L EFR++ D L GSV F VGQ VDV G++IGKG
Sbjct: 90 VTKPLAGHLAKAGVQAGEILKEFRIEADKAAELSPGSVVGVDLFEVGQKVDVQGVSIGKG 149
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KR+NFG RA+HG S SH GS G QDPGRVF K+M G +G T +NLE+
Sbjct: 150 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTATTQNLEI 209
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
+D +R LILVKG VPGA K + V + K+
Sbjct: 210 ARIDAQRKLILVKGAVPGA-KGGKVFVTPAVKARAK 244
>gi|260468554|ref|ZP_05813721.1| ribosomal protein L3 [Mesorhizobium opportunistum WSM2075]
gi|259028710|gb|EEW30019.1| ribosomal protein L3 [Mesorhizobium opportunistum WSM2075]
Length = 237
Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats.
Identities = 129/219 (58%), Positives = 163/219 (74%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT +YN G +PVTVL ++NCQVV RT +KNGY AVQ+G G AKVKN
Sbjct: 1 MRSGVIAKKVGMTRIYNDAGEHVPVTVLQMENCQVVAQRTQEKNGYTAVQLGVGLAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SK +RG F++ +V PK K+ EFRV D+++ VG+ + +F GQ VDVTG TIGKGF
Sbjct: 61 TSKALRGHFATASVEPKAKVAEFRVSA-DNMIDVGAEITVEHFVAGQKVDVTGTTIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH+ GG RATHG S+SHR+HGSTG RQDPG+VFK K MAG MG RVT +N+E+V
Sbjct: 120 QGVIKRHHMGGGRATHGNSVSHRTHGSTGQRQDPGKVFKGKHMAGHMGDTRVTTQNVEIV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
S D RGLIL++G VPG+ K +WILVRD+ K A+
Sbjct: 180 STDADRGLILIRGAVPGS-KGAWILVRDAAKVALPANAP 217
>gi|319899099|ref|YP_004159192.1| 50S ribosomal protein L3 [Bartonella clarridgeiae 73]
gi|319403063|emb|CBI76618.1| 50S ribosomal protein L3 [Bartonella clarridgeiae 73]
Length = 246
Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats.
Identities = 133/219 (60%), Positives = 161/219 (73%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+KLGMT +YN G +PVTVL LD CQVV RT++KNGY AVQ+G G AKVKN
Sbjct: 1 MRSGVIAQKLGMTRIYNDAGEHVPVTVLRLDKCQVVAQRTVEKNGYTAVQLGVGLAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
S+ +RG F+ V PK K+ EFRV D+LL VG+ + +F GQ VDVTG +IGKGF
Sbjct: 61 TSRALRGHFAKAAVEPKAKIAEFRVSP-DNLLDVGTEITVEHFVPGQRVDVTGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKRHNFGG RA+HG SI+HR+HGSTG QDPG+VFK KKMAG MG RVT +N+EV+
Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGQVRVTTQNVEVI 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
S D RGLILV+G V G+ K SWILVRD+ K +
Sbjct: 180 STDVDRGLILVRGSVSGS-KGSWILVRDAVKKRLPDNAP 217
>gi|226939186|ref|YP_002794257.1| 50S ribosomal protein L3 [Laribacter hongkongensis HLHK9]
gi|254803677|sp|C1DAR7|RL3_LARHH RecName: Full=50S ribosomal protein L3
gi|226714110|gb|ACO73248.1| RplC [Laribacter hongkongensis HLHK9]
Length = 214
Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats.
Identities = 98/213 (46%), Positives = 131/213 (61%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT V+ +G+ IPVTVL + +V +T D +GY AVQV G K
Sbjct: 1 MSLGLVGRKVGMTRVFAEDGQSIPVTVLDMSANRVTQIKTADTDGYNAVQVAYGSKKANR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V K G F+ V + L EF L VG + F VGQLVDVTG + GKG
Sbjct: 61 VLKAEAGHFAKAGVEAGRGLKEFTADAAKLAELKVGDTLTVELFQVGQLVDVTGTSQGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
FSG +KRHNF RA+HG S++ R+ GS G QDPGRVF K+MAG+ G + TV++LEV
Sbjct: 121 FSGVIKRHNFSSNRASHGNSVTTRAPGSIGQAQDPGRVFPGKRMAGQYGNVKRTVQSLEV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V +D +R L+L+KG VPG+K N +++ + K+
Sbjct: 181 VRIDAERQLLLIKGSVPGSKGNDVVVL-PAVKA 212
>gi|239825693|ref|YP_002948317.1| 50S ribosomal protein L3 [Geobacillus sp. WCH70]
gi|259646548|sp|C5D3R7|RL3_GEOSW RecName: Full=50S ribosomal protein L3
gi|239805986|gb|ACS23051.1| ribosomal protein L3 [Geobacillus sp. WCH70]
Length = 211
Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats.
Identities = 88/215 (40%), Positives = 127/215 (59%), Gaps = 4/215 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ G IPVTV+ V+ +T++K+GY A+Q+G + K
Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEATPNVVLQKKTIEKDGYEAIQLGFEDISEKR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP G + N +PK+ + E R D+ VG F G +VDVTG++ GKGF
Sbjct: 61 ANKPQIGHAAKANTAPKRFIREIRGANIDE-YEVGQEVKVDIFAEGDIVDVTGISKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH HG S HR GS G P RVFK+K++ GRMGG RVT++NL++V
Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGAIA-PNRVFKSKELPGRMGGQRVTIQNLKIV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
VD +R L+L+KG VPG +K ++V+ + K+
Sbjct: 178 KVDPERNLLLIKGNVPGPRKG-LVIVKSAVKAKAK 211
>gi|39936313|ref|NP_948589.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris CGA009]
gi|192292037|ref|YP_001992642.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris TIE-1]
gi|316933527|ref|YP_004108509.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris DX-1]
gi|42559577|sp|P60456|RL3_RHOPA RecName: Full=50S ribosomal protein L3; AltName: Full=RRP-L3
gi|226730557|sp|B3QBY0|RL3_RHOPT RecName: Full=50S ribosomal protein L3
gi|39650168|emb|CAE28691.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris CGA009]
gi|192285786|gb|ACF02167.1| ribosomal protein L3 [Rhodopseudomonas palustris TIE-1]
gi|315601241|gb|ADU43776.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris DX-1]
Length = 241
Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats.
Identities = 131/219 (59%), Positives = 157/219 (71%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT V+ G IPVTVL L NCQV+ HRT +KNGY+A+QVG+G K
Sbjct: 1 MRSGVIAQKVGMTRVFTEAGEHIPVTVLKLGNCQVLGHRTKEKNGYVALQVGSGSRKTVY 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+ K RG F++ V PK+K+ EFRV + D LLPVG+ +F VGQ VDVTG + GKGF
Sbjct: 61 MPKAERGQFAAAKVEPKRKVEEFRVSE-DALLPVGAEIQADHFVVGQFVDVTGTSTGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR NFGGLRATHGVS+SHRS GSTG RQDPG+ FKNKKM G MG +RVT NL VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRVTTLNLRVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
D +RGLILV+G VPG K WI VRD+ K A+
Sbjct: 180 QTDVERGLILVEGAVPG-TKGGWIRVRDAVKKALPADAP 217
>gi|144900884|emb|CAM77748.1| 50S ribosomal protein L3 [Magnetospirillum gryphiswaldense MSR-1]
Length = 230
Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats.
Identities = 128/215 (59%), Positives = 164/215 (76%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSG++A+K+GMT ++ +G +PVTVL +D QVV R+++K+GY AVQ+GAG AKVKN
Sbjct: 1 MRSGLIAQKVGMTRIFTEDGTHVPVTVLKVDTVQVVSTRSVEKDGYTAVQLGAGTAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+K R F++ V PKKKL EFRV +++L VG S ++F GQ VD+TG TIGKGF
Sbjct: 61 VAKAQRTTFANAKVEPKKKLVEFRVAP-ENVLEVGVELSAAHFIPGQFVDITGTTIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR NF GL ATHGVS+SHRSHGSTG RQDPG+VFK KKMAG MG +VT +NL+VV
Sbjct: 120 AGGMKRWNFRGLEATHGVSVSHRSHGSTGQRQDPGKVFKGKKMAGHMGDEQVTTQNLKVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
S D +RGLILVKG VPG++ SW+LV+D+ K +
Sbjct: 180 STDVERGLILVKGSVPGSE-GSWVLVKDAVKRKLP 213
>gi|41410259|ref|NP_963095.1| 50S ribosomal protein L3 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|118463063|ref|YP_883606.1| 50S ribosomal protein L3 [Mycobacterium avium 104]
gi|254776907|ref|ZP_05218423.1| 50S ribosomal protein L3 [Mycobacterium avium subsp. avium ATCC
25291]
gi|81831570|sp|Q73SB3|RL3_MYCPA RecName: Full=50S ribosomal protein L3
gi|166233161|sp|A0QL18|RL3_MYCA1 RecName: Full=50S ribosomal protein L3
gi|41399093|gb|AAS06711.1| RplC [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118164350|gb|ABK65247.1| ribosomal protein L3 [Mycobacterium avium 104]
Length = 217
Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats.
Identities = 91/213 (42%), Positives = 127/213 (59%), Gaps = 3/213 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ KLGMT V++ R +PVTV+ V RT +++GY AVQ+ GE + V
Sbjct: 3 RKGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTRIRTPEQDGYSAVQLAYGEISPRKV 62
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+KP+ G +++ ++P++ L E R+ D VG + FT G VDVTG + GKG
Sbjct: 63 NKPVTGQYAAAGINPRRFLAELRLDNPDAAAEYQVGQELTAEIFTDGSYVDVTGTSKGKG 122
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G MKRH F G A+HG HR GS G P RVFK +MAGRMG +RVTV+NL V
Sbjct: 123 FAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLV 182
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + G++L+KG VPG + ++VR + K
Sbjct: 183 HKVDTENGVLLIKGAVPG-RTGGLVMVRSAVKR 214
>gi|78221846|ref|YP_383593.1| 50S ribosomal protein L3 [Geobacter metallireducens GS-15]
gi|109893431|sp|Q39Y06|RL3_GEOMG RecName: Full=50S ribosomal protein L3
gi|78193101|gb|ABB30868.1| LSU ribosomal protein L3P [Geobacter metallireducens GS-15]
Length = 210
Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats.
Identities = 92/212 (43%), Positives = 129/212 (60%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ G++A+KLGMT ++ +GRRIPVTV+ C V+ +T++ +GY A+QVG
Sbjct: 1 MKKGLIAKKLGMTQIFADDGRRIPVTVVEAGPCIVLQKKTVETDGYNAIQVGFLAKDADK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+ + G S + EFRV +D D +G + F G VDVTG +IGKGF
Sbjct: 61 SGRALVGHCKSAGQGVFTYIREFRV-EDVDRYTIGDSITAEIFAPGDYVDVTGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR F G R++HG S HR+ GS G P RVFKNKKM G++G RVTV+ L+VV
Sbjct: 120 QGVIKRWGFRGGRSSHG-SCFHRAPGSIGSSAWPSRVFKNKKMPGQLGNERVTVQRLQVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD L+L++G +PGA KN +L++DS K+
Sbjct: 179 RVDTADNLLLIRGAIPGA-KNGILLLKDSVKA 209
>gi|218135281|ref|ZP_03464085.1| hypothetical protein BACPEC_03186 [Bacteroides pectinophilus ATCC
43243]
gi|217990666|gb|EEC56677.1| hypothetical protein BACPEC_03186 [Bacteroides pectinophilus ATCC
43243]
Length = 211
Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats.
Identities = 91/211 (43%), Positives = 124/211 (58%), Gaps = 3/211 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++A K+GMT ++N +G PVTVL C V +TL+ +GY AVQVG + + K
Sbjct: 1 MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQVKTLENDGYEAVQVGFADKREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KPM+G F VS K+ + EFR ++ V F G +D T ++ GKGF
Sbjct: 61 VNKPMKGHFDKAGVSYKRFVREFR-FENASEYNVKDEIKADIFAAGDKIDATAISKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH HG S HR GS G PGRVFK K M G+MG R+T++NLEVV
Sbjct: 120 QGAIKRHGQSRGPMAHG-SKFHRHQGSNGSATTPGRVFKGKGMPGQMGAKRITIQNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
VD + +ILVKG VPG KK S + ++++ K
Sbjct: 179 RVDAENNIILVKGAVPGPKK-SLVTLKETVK 208
>gi|229594830|ref|XP_001032401.3| ribosomal protein L3 containing protein [Tetrahymena thermophila]
gi|225566556|gb|EAR84738.3| ribosomal protein L3 containing protein [Tetrahymena thermophila
SB210]
Length = 439
Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats.
Identities = 99/213 (46%), Positives = 143/213 (67%), Gaps = 2/213 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+G++ KLGMT +++ G+ +TV+ +D CQVV +T +K+G A+Q+G GE +K +
Sbjct: 185 RTGILGYKLGMTSIWDKWGKLHALTVIQIDRCQVVQVKTEEKDGVNALQLGVGEKSLKRI 244
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G ++ PK+ L EF+V D LP G + S +F GQ VD+ G+++GKGF+
Sbjct: 245 NKPTIGHLMKNDIPPKRHLKEFKVSP-DCFLPAGYMLSARHFVPGQYVDIQGISVGKGFA 303
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR+ GSTG RQDPGRVFKNKKMAG MG +VT+ +L+V
Sbjct: 304 GTVKRWNFKMQDATHGNSLSHRAPGSTGQRQDPGRVFKNKKMAGHMGCEKVTIMDLQVYK 363
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
+D +R L+ ++G VPG S + +RD+FK V
Sbjct: 364 IDVERSLVYIRGHVPGKP-GSLVQIRDAFKKQV 395
>gi|15676069|ref|NP_273200.1| 50S ribosomal protein L3 [Neisseria meningitidis MC58]
gi|59802160|ref|YP_208872.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae FA 1090]
gi|121634016|ref|YP_974261.1| 50S ribosomal protein L3 [Neisseria meningitidis FAM18]
gi|218767168|ref|YP_002341680.1| 50S ribosomal protein L3 [Neisseria meningitidis Z2491]
gi|240015096|ref|ZP_04722009.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae DGI18]
gi|240081688|ref|ZP_04726231.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae FA19]
gi|240122168|ref|ZP_04735130.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID24-1]
gi|240124460|ref|ZP_04737416.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID332]
gi|240129136|ref|ZP_04741797.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae SK-93-1035]
gi|254805814|ref|YP_003084035.1| 50S ribosomal protein L3 [Neisseria meningitidis alpha14]
gi|260439541|ref|ZP_05793357.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae DGI2]
gi|268597785|ref|ZP_06131952.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae FA19]
gi|268683089|ref|ZP_06149951.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID332]
gi|268687519|ref|ZP_06154381.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae SK-93-1035]
gi|291042777|ref|ZP_06568518.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae DGI2]
gi|293398202|ref|ZP_06642407.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae F62]
gi|304388943|ref|ZP_07370990.1| 50S ribosomal protein L3 [Neisseria meningitidis ATCC 13091]
gi|42559565|sp|P60443|RL3_NEIMA RecName: Full=50S ribosomal protein L3
gi|42559566|sp|P60444|RL3_NEIMB RecName: Full=50S ribosomal protein L3
gi|81311149|sp|Q5F5S7|RL3_NEIG1 RecName: Full=50S ribosomal protein L3
gi|166233169|sp|A1KRH3|RL3_NEIMF RecName: Full=50S ribosomal protein L3
gi|7225360|gb|AAF40600.1| 50S ribosomal protein L3 [Neisseria meningitidis MC58]
gi|59719055|gb|AAW90460.1| putative 50S ribosomal protein L3 [Neisseria gonorrhoeae FA 1090]
gi|120865722|emb|CAM09451.1| 50S ribosomal protein L3 [Neisseria meningitidis FAM18]
gi|121051176|emb|CAM07447.1| 50S ribosomal protein L3 [Neisseria meningitidis Z2491]
gi|254669356|emb|CBA08445.1| 50S ribosomal protein L3 [Neisseria meningitidis alpha14]
gi|268551573|gb|EEZ46592.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae FA19]
gi|268623373|gb|EEZ55773.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID332]
gi|268627803|gb|EEZ60203.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae SK-93-1035]
gi|291013211|gb|EFE05177.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae DGI2]
gi|291611465|gb|EFF40535.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae F62]
gi|304337077|gb|EFM03264.1| 50S ribosomal protein L3 [Neisseria meningitidis ATCC 13091]
gi|308388358|gb|ADO30678.1| 50S ribosomal protein L3 [Neisseria meningitidis alpha710]
gi|316985672|gb|EFV64618.1| ribosomal L3 family protein [Neisseria meningitidis H44/76]
gi|319411374|emb|CBY91785.1| 50S ribosomal protein L3 [Neisseria meningitidis WUE 2594]
gi|325129061|gb|EGC51910.1| ribosomal protein L3 [Neisseria meningitidis N1568]
gi|325131084|gb|EGC53807.1| ribosomal protein L3 [Neisseria meningitidis OX99.30304]
gi|325133054|gb|EGC55726.1| ribosomal protein L3 [Neisseria meningitidis M6190]
gi|325135148|gb|EGC57774.1| ribosomal protein L3 [Neisseria meningitidis M13399]
gi|325137200|gb|EGC59795.1| ribosomal protein L3 [Neisseria meningitidis M0579]
gi|325139032|gb|EGC61578.1| ribosomal protein L3 [Neisseria meningitidis ES14902]
gi|325141156|gb|EGC63656.1| ribosomal protein L3 [Neisseria meningitidis CU385]
gi|325143232|gb|EGC65571.1| ribosomal protein L3 [Neisseria meningitidis 961-5945]
gi|325145339|gb|EGC67616.1| ribosomal protein L3 [Neisseria meningitidis M01-240013]
gi|325197429|gb|ADY92885.1| ribosomal protein L3 [Neisseria meningitidis G2136]
gi|325199355|gb|ADY94810.1| ribosomal protein L3 [Neisseria meningitidis H44/76]
gi|325203023|gb|ADY98477.1| ribosomal protein L3 [Neisseria meningitidis M01-240149]
gi|325203262|gb|ADY98715.1| ribosomal protein L3 [Neisseria meningitidis M01-240355]
gi|325205235|gb|ADZ00688.1| ribosomal protein L3 [Neisseria meningitidis M04-240196]
gi|325207178|gb|ADZ02630.1| ribosomal protein L3 [Neisseria meningitidis NZ-05/33]
Length = 214
Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats.
Identities = 104/212 (49%), Positives = 134/212 (63%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K
Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+K G F+ V + L EF + ++ L G + S F VGQLVDVTG + GKG
Sbjct: 61 VNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEV
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
V VD +R L+LVKG VPGA NS ++VR S K
Sbjct: 181 VRVDAERQLLLVKGAVPGAV-NSDVVVRPSVK 211
>gi|161870915|ref|YP_001600095.1| 50S ribosomal protein L3 [Neisseria meningitidis 053442]
gi|189042853|sp|A9M3W6|RL3_NEIM0 RecName: Full=50S ribosomal protein L3
gi|161596468|gb|ABX74128.1| 50S ribosomal protein L3 [Neisseria meningitidis 053442]
Length = 214
Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats.
Identities = 104/212 (49%), Positives = 135/212 (63%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K
Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+K G F+ V + L EF + ++ L G + S F VGQLVDVTG++ GKG
Sbjct: 61 VNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGISKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEV
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
V VD +R L+LVKG VPGA NS ++VR S K
Sbjct: 181 VRVDAERQLLLVKGAVPGAV-NSDVVVRPSVK 211
>gi|300022541|ref|YP_003755152.1| 50S ribosomal protein L3 [Hyphomicrobium denitrificans ATCC 51888]
gi|299524362|gb|ADJ22831.1| 50S ribosomal protein L3 [Hyphomicrobium denitrificans ATCC 51888]
Length = 233
Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats.
Identities = 121/216 (56%), Positives = 157/216 (72%), Gaps = 2/216 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT ++ G +PVTVL L+N QV+ HRT++KNGY A+QVG G K
Sbjct: 1 MRSGVIAQKVGMTRIFTDAGEHVPVTVLRLENLQVLSHRTVEKNGYTAIQVGGGTRKPSR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++K RG F+ V PK+K+ EFRV ++L+ VG+ + +F GQ VDVTG T GKGF
Sbjct: 61 LTKADRGTFAKAEVEPKRKIAEFRVSP-ENLIDVGAEITADHFVPGQFVDVTGTTQGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GAMKR NFGGLRATHGVS++HR+HGSTG RQDPG+VFK KKMAG +G RVT +NL V
Sbjct: 120 QGAMKRWNFGGLRATHGVSVTHRAHGSTGQRQDPGKVFKGKKMAGHLGDERVTTQNLVVA 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
+D RGL++V+G VPG+ K W++VRD+ K A
Sbjct: 180 KIDKARGLVMVRGAVPGS-KGGWVIVRDAVKKAAPA 214
>gi|39997949|ref|NP_953900.1| 50S ribosomal protein L3 [Geobacter sulfurreducens PCA]
gi|42559575|sp|P60454|RL3_GEOSL RecName: Full=50S ribosomal protein L3
gi|39984894|gb|AAR36250.1| ribosomal protein L3 [Geobacter sulfurreducens PCA]
gi|298506888|gb|ADI85611.1| ribosomal protein L3 [Geobacter sulfurreducens KN400]
Length = 210
Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats.
Identities = 96/212 (45%), Positives = 133/212 (62%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ G++A+KLGMT ++ +G+RIPVTV+ C V+ +T +GY A+QVG + +
Sbjct: 1 MKKGLIAKKLGMTQIFAEDGKRIPVTVVQAGPCVVLQKKTSATDGYDAIQVGFLSQEARK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KPM G + + EFR+ D D VG V S F VG+ +DVTG +IGKGF
Sbjct: 61 VTKPMLGHIKAAGQGAFAHIREFRLD-DVDRYNVGDVISADAFEVGEYIDVTGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR F G R++HG S HR+ GS G P RVFKNKKM G++G RVTV+ L+VV
Sbjct: 120 QGVIKRWGFRGGRSSHG-SCFHRAPGSIGSSAYPSRVFKNKKMPGQLGNERVTVQRLQVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD ++L+KG +PGA KN +LV+D+ K
Sbjct: 179 RVDAADNILLIKGAIPGA-KNGIVLVKDTVKP 209
>gi|254670741|emb|CBA06972.1| 50S ribosomal protein L3 [Neisseria meningitidis alpha153]
gi|261391678|emb|CAX49127.1| 50S ribosomal protein L3 [Neisseria meningitidis 8013]
Length = 214
Score = 217 bits (554), Expect = 7e-55, Method: Composition-based stats.
Identities = 104/212 (49%), Positives = 134/212 (63%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K
Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+K G F+ V + L EF + ++ L G + S F VGQLVDVTG + GKG
Sbjct: 61 VNKTEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEV
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
V VD +R L+LVKG VPGA NS ++VR S K
Sbjct: 181 VRVDAERQLLLVKGAVPGAV-NSDVVVRPSVK 211
>gi|323144964|ref|ZP_08079524.1| 50S ribosomal protein L3 [Succinatimonas hippei YIT 12066]
gi|322415243|gb|EFY06017.1| 50S ribosomal protein L3 [Succinatimonas hippei YIT 12066]
Length = 212
Score = 217 bits (554), Expect = 7e-55, Method: Composition-based stats.
Identities = 97/213 (45%), Positives = 132/213 (61%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RKLGMT V+N +G+ +PVTV+ ++ +V + ++ +GY A+QV GE K
Sbjct: 1 MSIGLIGRKLGMTRVFNQDGKSVPVTVIQVEANRVTQIKNIETDGYCAIQVTTGERKTSR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
++K G F+ V+ + L+EFR++ + + VGS F + VDVTG + GKG
Sbjct: 61 MTKAEIGHFAKTGVAAGRGLWEFRLEPSELEAYQVGSEIKVDAFKDVKKVDVTGQSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
+G +KR+NF THG S SHR GSTG Q PGRVFK KKM GRMG RVTV L++
Sbjct: 121 TAGTVKRYNFRTQDFTHGNSRSHRVPGSTGQNQTPGRVFKGKKMVGRMGNERVTVMCLDL 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD +R L+LVKG VPGA I VR S K+
Sbjct: 181 VRVDSERNLLLVKGAVPGANNGDLI-VRPSVKA 212
>gi|157148900|ref|YP_001456219.1| 50S ribosomal protein L3 [Citrobacter koseri ATCC BAA-895]
gi|166233131|sp|A8AQM0|RL3_CITK8 RecName: Full=50S ribosomal protein L3
gi|157086105|gb|ABV15783.1| hypothetical protein CKO_04738 [Citrobacter koseri ATCC BAA-895]
Length = 209
Score = 217 bits (554), Expect = 7e-55, Method: Composition-based stats.
Identities = 94/211 (44%), Positives = 132/211 (62%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY AVQV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR+ + ++ VG S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRLAEGEE-YTVGQSISVELFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA ++V+ + K+
Sbjct: 180 VDAERNLLLVKGGVPGA-TGCDLIVKPAVKA 209
>gi|126453776|ref|YP_001068034.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1106a]
gi|134283182|ref|ZP_01769883.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 305]
gi|217424706|ref|ZP_03456203.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 576]
gi|237814145|ref|YP_002898596.1| 50S ribosomal protein L3 [Burkholderia pseudomallei MSHR346]
gi|238563921|ref|ZP_00438031.2| 50S ribosomal protein L3 [Burkholderia mallei GB8 horse 4]
gi|242314689|ref|ZP_04813705.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1106b]
gi|251767493|ref|ZP_02267491.2| 50S ribosomal protein L3 [Burkholderia mallei PRL-20]
gi|254174782|ref|ZP_04881443.1| 50S ribosomal protein L3 [Burkholderia mallei ATCC 10399]
gi|254198510|ref|ZP_04904931.1| 50S ribosomal protein L3 [Burkholderia pseudomallei S13]
gi|254201239|ref|ZP_04907603.1| 50S ribosomal protein L3 [Burkholderia mallei FMH]
gi|254206580|ref|ZP_04912931.1| 50S ribosomal protein L3 [Burkholderia mallei JHU]
gi|254260454|ref|ZP_04951508.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1710a]
gi|254300578|ref|ZP_04968023.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 406e]
gi|254357118|ref|ZP_04973392.1| 50S ribosomal protein L3 [Burkholderia mallei 2002721280]
gi|212288252|sp|A3P0B3|RL3_BURP0 RecName: Full=50S ribosomal protein L3
gi|126227418|gb|ABN90958.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1106a]
gi|134245377|gb|EBA45470.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 305]
gi|147747133|gb|EDK54209.1| 50S ribosomal protein L3 [Burkholderia mallei FMH]
gi|147752122|gb|EDK59188.1| 50S ribosomal protein L3 [Burkholderia mallei JHU]
gi|148026182|gb|EDK84267.1| 50S ribosomal protein L3 [Burkholderia mallei 2002721280]
gi|157810515|gb|EDO87685.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 406e]
gi|160695827|gb|EDP85797.1| 50S ribosomal protein L3 [Burkholderia mallei ATCC 10399]
gi|169655250|gb|EDS87943.1| 50S ribosomal protein L3 [Burkholderia pseudomallei S13]
gi|217392162|gb|EEC32187.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 576]
gi|237506368|gb|ACQ98686.1| 50S ribosomal protein L3 [Burkholderia pseudomallei MSHR346]
gi|238519676|gb|EEP83145.1| 50S ribosomal protein L3 [Burkholderia mallei GB8 horse 4]
gi|242137928|gb|EES24330.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1106b]
gi|243062596|gb|EES44782.1| 50S ribosomal protein L3 [Burkholderia mallei PRL-20]
gi|254219143|gb|EET08527.1| 50S ribosomal protein L3 [Burkholderia pseudomallei 1710a]
Length = 223
Score = 217 bits (554), Expect = 7e-55, Method: Composition-based stats.
Identities = 99/212 (46%), Positives = 132/212 (62%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G +
Sbjct: 5 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 64
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP+ G + V + L EFR++ D L G+V P F VGQ VDV G++IGKG
Sbjct: 65 VTKPLAGHLAKAGVEAGEILKEFRIEADKAAELSNGAVIGPDLFEVGQKVDVQGVSIGKG 124
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KR+NFG RA+HG S SH GS G QDPGRVF K+M G MG VTV+NLE+
Sbjct: 125 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 184
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+D R L+LVKG VPGA K + V + K
Sbjct: 185 ARIDADRKLLLVKGAVPGA-KGGKVFVTPAVK 215
>gi|160895840|ref|YP_001561422.1| 50S ribosomal protein L3 [Delftia acidovorans SPH-1]
gi|226725161|sp|A9BPR8|RL3_DELAS RecName: Full=50S ribosomal protein L3
gi|160361424|gb|ABX33037.1| ribosomal protein L3 [Delftia acidovorans SPH-1]
Length = 224
Score = 217 bits (554), Expect = 7e-55, Method: Composition-based stats.
Identities = 88/220 (40%), Positives = 127/220 (57%), Gaps = 3/220 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GM ++ +G +PVTV+ + N +V +T + +GY+A+QV G K V
Sbjct: 6 SLGLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQVKTQENDGYVALQVTFGSRKASRV 65
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVF--SPSYFTVGQLVDVTGMTIGKG 119
+KP G + V + + EFRV ++ F+VGQ VDV G +IGKG
Sbjct: 66 TKPEAGHLAKAGVEAGEVMGEFRVTEETAGKYAAGSVLPVAELFSVGQKVDVQGTSIGKG 125
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G +KRHNF RA+HG S SH GS QDPGRVF KKM G MG +T +NL+V
Sbjct: 126 FAGTIKRHNFRSQRASHGNSRSHNVPGSISMAQDPGRVFPGKKMTGHMGDETITTQNLDV 185
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
V +D+ R L+L+KG VPG+ K ++ VR + K+ +
Sbjct: 186 VRIDEARQLLLIKGAVPGS-KGGFVTVRPAIKAKASKGAN 224
>gi|227832219|ref|YP_002833926.1| 50S ribosomal protein L3 [Corynebacterium aurimucosum ATCC 700975]
gi|262183926|ref|ZP_06043347.1| 50S ribosomal protein L3 [Corynebacterium aurimucosum ATCC 700975]
gi|254803667|sp|C3PKQ2|RL3_CORA7 RecName: Full=50S ribosomal protein L3
gi|227453235|gb|ACP31988.1| 50S ribosomal protein L3 [Corynebacterium aurimucosum ATCC 700975]
Length = 218
Score = 217 bits (554), Expect = 7e-55, Method: Composition-based stats.
Identities = 87/214 (40%), Positives = 122/214 (57%), Gaps = 2/214 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT V++ E R +PVTV+ C V RT + +GY A+Q+ GE + V+
Sbjct: 7 KGILGTKLGMTQVFDEENRVVPVTVVEAGPCVVTQIRTKETDGYNAIQIAFGEKDPRKVN 66
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP G F V+P++ + E R+ D VG F VDVTG T G G++G
Sbjct: 67 KPATGHFKKAGVTPRRYVAEIRMD-DTSAYEVGQEVKVDIFEGVSFVDVTGTTKGHGYAG 125
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
AMKRH F G A HG +HR G G PGRVFK K+MAGRMG +RVT +NL++ +
Sbjct: 126 AMKRHGFAGQGAAHGNQAAHRRVGGIGGASFPGRVFKGKRMAGRMGQDRVTTQNLKIQKI 185
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
D + L+L+KG +PGA + + V+ + K +
Sbjct: 186 DAESNLLLIKGAIPGA-RGGLVTVKTAVKGGAHA 218
>gi|269837066|ref|YP_003319294.1| 50S ribosomal protein L3 [Sphaerobacter thermophilus DSM 20745]
gi|269786329|gb|ACZ38472.1| ribosomal protein L3 [Sphaerobacter thermophilus DSM 20745]
Length = 216
Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats.
Identities = 95/211 (45%), Positives = 127/211 (60%), Gaps = 5/211 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGMT ++N G+ IPVTVL + C V +T +++GY AVQ+G G K
Sbjct: 1 MIHGLLGKKLGMTQIFNEAGQAIPVTVLEVGPCVVTQVKTRERDGYEAVQLGFGHKK--R 58
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+++P RG + P + + + VG V S F G+ VDVTG + G+GF
Sbjct: 59 LNQPERGHLRASGAQP--RYLREVKADNIEEYSVGQVIDCSVFKEGERVDVTGTSKGRGF 116
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKRH FGG ATHG S R+ GS G PGRVFK +MAG MG RVTV+NLEVV
Sbjct: 117 AGVMKRHGFGGGPATHGQSDRKRAPGSIGASATPGRVFKGLRMAGHMGNQRVTVQNLEVV 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
VD +R ++LV+G VPGA +LVR + K
Sbjct: 177 RVDPERNVVLVRGSVPGA-NGQLVLVRRAVK 206
>gi|95931442|ref|ZP_01314148.1| ribosomal protein L3 [Desulfuromonas acetoxidans DSM 684]
gi|95132510|gb|EAT14203.1| ribosomal protein L3 [Desulfuromonas acetoxidans DSM 684]
Length = 210
Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats.
Identities = 93/212 (43%), Positives = 125/212 (58%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M +G++ +KLGMT ++ G RIPVTV+ C VV + +D +GY AVQ+G GE K
Sbjct: 2 MVNGILGKKLGMTQIFTESGMRIPVTVIEAGPCTVVQKKVVDTDGYDAVQLGFGEQKAHR 61
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP G F L E + +L + F+ G +VDV G + GKGF
Sbjct: 62 INKPKMGHFKKAGKGVFASLREMDG-EIAELEVGAEIVCGDVFSAGDIVDVMGTSKGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G MKR NF G R+THG S HR+ G+ GC P RVFK KKMAG+MG RVT++NLE+V
Sbjct: 121 QGVMKRWNFSGGRSTHG-SKFHRAPGAIGCSAWPSRVFKGKKMAGQMGNERVTIQNLEIV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V + LILVKG +PG KN + +R + K+
Sbjct: 180 DVRADQNLILVKGAIPGP-KNGLVTIRKAIKA 210
>gi|289641166|ref|ZP_06473334.1| ribosomal protein L3 [Frankia symbiont of Datisca glomerata]
gi|289509107|gb|EFD30038.1| ribosomal protein L3 [Frankia symbiont of Datisca glomerata]
Length = 244
Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats.
Identities = 97/213 (45%), Positives = 124/213 (58%), Gaps = 2/213 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ KLGMT V++ R IPVTV+ V RT D++GY AVQ+G GE + V++
Sbjct: 8 GLLGTKLGMTQVWDANNRVIPVTVIKAGPNVVTQVRTSDRDGYSAVQLGYGEIDPRRVTQ 67
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P+RG F+ V P++ L E R D G + F+ G +VDVTG + GKGF+G
Sbjct: 68 PLRGHFARAGVPPRRHLVELR-TADATNYRPGQELTGEIFSAGSIVDVTGTSKGKGFAGV 126
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
MKRH F GL A HGV HRS GS G PGRVFK +MAGRMG RVT L + +VD
Sbjct: 127 MKRHGFKGLGAGHGVERKHRSPGSVGGCATPGRVFKGLRMAGRMGHERVTTAGLTIHAVD 186
Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
+RG +LVKG VPG +LVR + K
Sbjct: 187 TERGFLLVKGAVPGPD-GGLVLVRSAAKRPAPA 218
>gi|319639549|ref|ZP_07994296.1| 50S ribosomal protein L3 [Neisseria mucosa C102]
gi|317399120|gb|EFV79794.1| 50S ribosomal protein L3 [Neisseria mucosa C102]
Length = 214
Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats.
Identities = 103/212 (48%), Positives = 134/212 (63%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K
Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+K G F+ V + L EF + ++ L G + S F VGQLVDVTG + GKG
Sbjct: 61 VNKAEAGHFAKAGVEAGRGLVEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEV
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
V VD +R L+LVKG VPG+ NS ++VR S K
Sbjct: 181 VRVDAERQLLLVKGAVPGSV-NSDVVVRPSVK 211
>gi|56477594|ref|YP_159183.1| 50S ribosomal protein L3 [Aromatoleum aromaticum EbN1]
gi|81821104|sp|Q5P332|RL3_AZOSE RecName: Full=50S ribosomal protein L3
gi|56313637|emb|CAI08282.1| 50S ribosomal protein L3 [Aromatoleum aromaticum EbN1]
Length = 214
Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats.
Identities = 100/213 (46%), Positives = 131/213 (61%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ +GR +PVTVL + N +V +T + +GY AVQV G+ +
Sbjct: 1 MSLGLVGRKVGMTRIFAEDGRSVPVTVLDVSNNRVTQIKTPESDGYAAVQVTFGKRRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQ-KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V KP+ G + V L EFRV+ + G V F VGQ VDVTG +IGKG
Sbjct: 61 VGKPLAGHLAKAGVEAGHMLKEFRVETEQVAGFKAGDVVGVDLFAVGQKVDVTGTSIGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
FSG KRHNF RA+HG S+SH + GS G QDPGRVF K+MAG+ G T + LEV
Sbjct: 121 FSGVGKRHNFSSNRASHGNSVSHNAPGSIGMAQDPGRVFPGKRMAGQYGNTTCTTQGLEV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD +R L+LVKG VPG+ K ++VR + K+
Sbjct: 181 VRVDVERQLLLVKGAVPGS-KGGDVIVRPAVKA 212
>gi|257440269|ref|ZP_05616024.1| 50S ribosomal protein L3 [Faecalibacterium prausnitzii A2-165]
gi|257197303|gb|EEU95587.1| 50S ribosomal protein L3 [Faecalibacterium prausnitzii A2-165]
Length = 210
Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats.
Identities = 91/212 (42%), Positives = 126/212 (59%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT +++ G+ IPVTV+ C VV +T++ +GY AVQ+G GE K
Sbjct: 1 MVKGIIGKKVGMTQLFDESGKVIPVTVIEAGPCTVVQKKTVESDGYQAVQLGFGEVSAKK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+K G F NV+PKK L EFR+ +D + VG V F G VDV G++ GKG+
Sbjct: 61 VNKAAAGHFKKANVAPKKTLREFRL-EDVSAMNVGDVLKADVFAAGDKVDVAGVSKGKGY 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR LR +HG R GS G +P RVF K++ G MG RVTV+NL VV
Sbjct: 120 QGVIKRFGQHRLRESHGTGPVARHAGSMGAISNPSRVFPGKRLPGHMGFVRVTVQNLTVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + LI VKG VPG+ K + + + +S K+
Sbjct: 180 KVDTENNLIAVKGAVPGS-KGTIVTLANSVKA 210
>gi|239997926|ref|ZP_04717850.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae 35/02]
gi|240017545|ref|ZP_04724085.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae FA6140]
gi|240113966|ref|ZP_04728456.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae MS11]
gi|240116700|ref|ZP_04730762.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID18]
gi|240118922|ref|ZP_04732984.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID1]
gi|240124671|ref|ZP_04737557.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae SK-92-679]
gi|254494721|ref|ZP_05107892.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae 1291]
gi|268593776|ref|ZP_06127943.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae 35/02]
gi|268600030|ref|ZP_06134197.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae MS11]
gi|268602368|ref|ZP_06136535.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID18]
gi|268604631|ref|ZP_06138798.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID1]
gi|268683245|ref|ZP_06150107.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae SK-92-679]
gi|226513761|gb|EEH63106.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae 1291]
gi|268547165|gb|EEZ42583.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae 35/02]
gi|268584161|gb|EEZ48837.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae MS11]
gi|268586499|gb|EEZ51175.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID18]
gi|268588762|gb|EEZ53438.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae PID1]
gi|268623529|gb|EEZ55929.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae SK-92-679]
Length = 214
Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats.
Identities = 104/212 (49%), Positives = 134/212 (63%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K
Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+K G F+ V + L EF + ++ L G + S F VGQLVDVTG + GKG
Sbjct: 61 VNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEV
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGVAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
V VD +R L+LVKG VPGA NS ++VR S K
Sbjct: 181 VRVDAERQLLLVKGAVPGAV-NSDVVVRPSVK 211
>gi|146340057|ref|YP_001205105.1| 50S ribosomal protein L3 [Bradyrhizobium sp. ORS278]
gi|166233121|sp|A4YSJ2|RL3_BRASO RecName: Full=50S ribosomal protein L3
gi|146192863|emb|CAL76868.1| 50S ribosomal subunit protein L3 [Bradyrhizobium sp. ORS278]
Length = 239
Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats.
Identities = 129/219 (58%), Positives = 158/219 (72%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT V+ G IPVTVL L NCQVV HRT +KNGY+A+Q+G+G K
Sbjct: 1 MRSGVIAQKVGMTRVFTETGEHIPVTVLKLGNCQVVGHRTTEKNGYVALQLGSGSRKTVY 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+ K RG F+ V PK+KL EFRV + D L+PVG+ +F VGQ VDVTG ++GKGF
Sbjct: 61 MPKAERGQFAVAKVEPKRKLAEFRVSE-DSLIPVGAEIQADHFVVGQFVDVTGTSVGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ +KNKKM G MG +R+T NL VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTWKNKKMPGHMGVDRITTLNLRVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
D +RGLILV+G VPG+ K WI VRD+ K + +
Sbjct: 180 QTDVERGLILVEGAVPGS-KGGWISVRDAVKKPLPKEAP 217
>gi|254501408|ref|ZP_05113559.1| ribosomal protein L3 [Labrenzia alexandrii DFL-11]
gi|222437479|gb|EEE44158.1| ribosomal protein L3 [Labrenzia alexandrii DFL-11]
Length = 232
Score = 217 bits (553), Expect = 9e-55, Method: Composition-based stats.
Identities = 126/216 (58%), Positives = 158/216 (73%), Gaps = 2/216 (0%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++A+K+GMT +YN G +PVTVL L+NCQVV HRT +KNGY A+Q+GAG KVKN K
Sbjct: 1 MIAQKVGMTRIYNDAGEHVPVTVLRLENCQVVAHRTDEKNGYNALQLGAGTRKVKNTPKA 60
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+RG F+ V PK+ + EFRV ++++ VG+ + ++ GQ VDVTG +IGKGF+G M
Sbjct: 61 LRGHFAVAKVEPKRTVVEFRVSA-ENMIDVGAEITADHYVEGQFVDVTGTSIGKGFAGVM 119
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KRHNFGG RA+HG SISHRSHGSTG QDPGRVFK KKMAG MG RVT +NL+VV D
Sbjct: 120 KRHNFGGGRASHGNSISHRSHGSTGQCQDPGRVFKGKKMAGHMGDARVTTQNLKVVRTDV 179
Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
+RGLI+V+G VPGA K WI VRD+ K A+ V
Sbjct: 180 ERGLIMVEGSVPGA-KGGWIQVRDAIKKALPENVPV 214
>gi|212288260|sp|A8IAS6|RL3_AZOC5 RecName: Full=50S ribosomal protein L3
Length = 241
Score = 217 bits (553), Expect = 9e-55, Method: Composition-based stats.
Identities = 133/219 (60%), Positives = 162/219 (73%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+KLGMT ++ G +PVTVL +++CQVV HRTLDKNGY+AVQ+GAG+ K KN
Sbjct: 1 MRSGVIAQKLGMTRIFTDAGEHLPVTVLKVESCQVVAHRTLDKNGYVAVQLGAGKRKPKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+K RG F+ V PK+KL EFRV D L+PVG+ + +F VGQ VDVTG TIGKGF
Sbjct: 61 TNKAERGQFARAEVEPKRKLAEFRVDA-DALIPVGAEITADHFVVGQYVDVTGTTIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKRHNFGGLRA+HGVSISHRS GSTG RQDPG+ FKNKKM G MG VT +NL+VV
Sbjct: 120 AGGMKRHNFGGLRASHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHMGDVTVTTQNLKVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
D +RGLI V+G VPG WI+VRD+ K + +
Sbjct: 180 MTDVERGLIAVEGAVPG-HAGGWIMVRDAVKKRLPSEAP 217
>gi|237728655|ref|ZP_04559136.1| 50S ribosomal protein L3 [Citrobacter sp. 30_2]
gi|226909277|gb|EEH95195.1| 50S ribosomal protein L3 [Citrobacter sp. 30_2]
Length = 209
Score = 217 bits (553), Expect = 9e-55, Method: Composition-based stats.
Identities = 95/211 (45%), Positives = 131/211 (62%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY AVQV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR+ D + VG S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRL-ADGEEYTVGQNISVELFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA ++V+ + K+
Sbjct: 180 VDAERNLLLVKGGVPGA-TGCDLIVKPAVKA 209
>gi|260589279|ref|ZP_05855192.1| 50S ribosomal protein L3 [Blautia hansenii DSM 20583]
gi|331082685|ref|ZP_08331808.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 6_1_63FAA]
gi|260540360|gb|EEX20929.1| 50S ribosomal protein L3 [Blautia hansenii DSM 20583]
gi|330400304|gb|EGG79946.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 6_1_63FAA]
Length = 209
Score = 217 bits (553), Expect = 9e-55, Method: Composition-based stats.
Identities = 91/211 (43%), Positives = 125/211 (59%), Gaps = 5/211 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++A K+GMT ++N +G PVTVL C V +T+D +GY AVQVG G+ +
Sbjct: 1 MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQVKTMDNDGYEAVQVGFGDKRENI 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KPM+G F VS K+ + E +++ + +G F G +DVT + GKGF
Sbjct: 61 VNKPMKGHFEKAGVSCKRFVRELKLEGE---YTLGQEIKADIFAAGDKIDVTATSKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH HG S HR GS G DP +VFK K+M G MG RVTV+NLEVV
Sbjct: 118 QGAIKRHGQSRGPMAHG-SKYHRHAGSNGACSDPSKVFKGKRMPGHMGHVRVTVQNLEVV 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
VD + L+LVKG VPG KK S + ++++ K
Sbjct: 177 RVDAENNLLLVKGAVPGPKK-SLVTIKETVK 206
>gi|255324736|ref|ZP_05365850.1| 50S ribosomal protein L3 [Corynebacterium tuberculostearicum SK141]
gi|255298211|gb|EET77514.1| 50S ribosomal protein L3 [Corynebacterium tuberculostearicum SK141]
Length = 218
Score = 217 bits (553), Expect = 9e-55, Method: Composition-based stats.
Identities = 85/214 (39%), Positives = 123/214 (57%), Gaps = 2/214 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ +KLGMT V++ + R +PVTV+ C V RT + +GY A+Q+ GE + +
Sbjct: 7 KGILGKKLGMTQVFDEDNRVVPVTVVEAGPCVVTQIRTPETDGYSAIQIAFGEIDPRKAN 66
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP+ G F V+P++ + E R+ D VG F VDVTG T G G++G
Sbjct: 67 KPVGGHFKKAGVTPRRHVAEIRMD-DTSAYEVGQEVKVDIFEGTTFVDVTGKTKGHGYAG 125
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
AMKRH F G A HG +HR G G PGRVFK K+MAGRMG +RVT +NL++ +
Sbjct: 126 AMKRHGFAGQGAAHGNQAAHRRVGGIGGAATPGRVFKGKRMAGRMGHDRVTTQNLKIQKI 185
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
D + L+L+KG +PGA + + V+ + K +
Sbjct: 186 DAESNLLLIKGAIPGA-RGGLVTVKTAVKGGAHA 218
>gi|49474404|ref|YP_032446.1| 50S ribosomal protein L3 [Bartonella quintana str. Toulouse]
gi|81827601|sp|Q6FZC2|RL3_BARQU RecName: Full=50S ribosomal protein L3
gi|49239908|emb|CAF26306.1| 50s ribosomal protein l3 [Bartonella quintana str. Toulouse]
Length = 246
Score = 217 bits (553), Expect = 9e-55, Method: Composition-based stats.
Identities = 133/215 (61%), Positives = 165/215 (76%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+KLGMT VYN G +PVTVL L+NCQV+ RT++KNGY AVQ+G G AKVKN
Sbjct: 1 MRSGVIAQKLGMTRVYNDAGEHVPVTVLRLENCQVIAQRTIEKNGYTAVQLGVGFAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
S+ +RG F+ V+V PK K+ EFRV D+LL +G+ + +F GQ VDVTG +IGKGF
Sbjct: 61 TSRALRGHFAKVSVEPKAKIAEFRVSP-DNLLDIGTEITAQHFVPGQRVDVTGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKRHNFGG RA+HG SI+HR+HGSTG QDPG+VFK KKMAG MG RVT +N+EVV
Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGQVRVTTQNIEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
S D +RGLILV+G V G+ K +WILVRD+ K +
Sbjct: 180 STDVERGLILVRGAVSGS-KGAWILVRDAVKRPLP 213
>gi|170731682|ref|YP_001763629.1| 50S ribosomal protein L3 [Burkholderia cenocepacia MC0-3]
gi|206558641|ref|YP_002229401.1| 50S ribosomal protein L3 [Burkholderia cenocepacia J2315]
gi|212288250|sp|B1JU22|RL3_BURCC RecName: Full=50S ribosomal protein L3
gi|212288251|sp|B4E5C0|RL3_BURCJ RecName: Full=50S ribosomal protein L3
gi|169814924|gb|ACA89507.1| ribosomal protein L3 [Burkholderia cenocepacia MC0-3]
gi|198034678|emb|CAR50545.1| 50S ribosomal protein L3 [Burkholderia cenocepacia J2315]
Length = 216
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 96/214 (44%), Positives = 130/214 (60%), Gaps = 2/214 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G +
Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP+ G + V + L EFR+ L G+V F VGQ VDV G++IGKG
Sbjct: 61 VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAVVGADLFEVGQKVDVQGVSIGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KR+NF RATHG S SH GS G QDPGRVF K+M G MG VTV+NLE+
Sbjct: 121 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTVQNLEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+D +R L+LVKG +PGA K + V + K+
Sbjct: 181 ARIDAERKLLLVKGAIPGA-KGGKVFVTPAVKTK 213
>gi|13470551|ref|NP_102120.1| 50S ribosomal protein L3 [Mesorhizobium loti MAFF303099]
gi|42559683|sp|Q98N57|RL3_RHILO RecName: Full=50S ribosomal protein L3
gi|14021293|dbj|BAB47906.1| 50S ribosomal protein L3 [Mesorhizobium loti MAFF303099]
Length = 237
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 131/219 (59%), Positives = 164/219 (74%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT +YN G +PVTVL ++NCQVV RT +KNGY AVQ+G G AKVKN
Sbjct: 1 MRSGVIAKKVGMTRIYNDAGEHVPVTVLQMENCQVVAQRTQEKNGYTAVQLGVGLAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SK MRG F++ +V PK K+ EFRV D+++ VG+ + +F GQ VDVTG TIGKGF
Sbjct: 61 TSKAMRGHFATASVEPKAKVAEFRVSA-DNMIDVGAEITVEHFVAGQKVDVTGTTIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH+ GG RATHG S+SHR+HGSTG RQDPG+VFK KKMAG MG RVT +N+E+V
Sbjct: 120 QGVIKRHHMGGGRATHGNSVSHRTHGSTGQRQDPGKVFKGKKMAGHMGDTRVTTQNVEIV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
S D RGLIL++G VPG+ K +WILVRD+ K A+
Sbjct: 180 STDADRGLILIRGAVPGS-KGAWILVRDAAKVALPANAP 217
>gi|300857762|ref|YP_003782745.1| 50S ribosomal protein L3 [Corynebacterium pseudotuberculosis FRC41]
gi|300685216|gb|ADK28138.1| 50S ribosomal protein L3 [Corynebacterium pseudotuberculosis FRC41]
gi|302205500|gb|ADL09842.1| 50S ribosomal protein L3 [Corynebacterium pseudotuberculosis C231]
gi|302330055|gb|ADL20249.1| 50S ribosomal protein L3 [Corynebacterium pseudotuberculosis 1002]
gi|308275736|gb|ADO25635.1| 50S ribosomal protein L3 [Corynebacterium pseudotuberculosis I19]
Length = 218
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 84/214 (39%), Positives = 121/214 (56%), Gaps = 2/214 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT +++ + R IPVTV+ C V RT++ +GY A+Q+ G+ + +
Sbjct: 7 KGILGTKLGMTQIFDEDNRVIPVTVVEAGPCVVTQIRTIETDGYNAIQIAYGDIDPRKAN 66
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP G F V+P++ + E R+ D +G + F VDVTG T GKG++G
Sbjct: 67 KPATGHFKKAGVTPRRHVAEIRM-NDVSAYELGQDVTVEIFEGITFVDVTGTTKGKGYAG 125
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
AMKRH F G A HG +HR G G PGRVFK +MAGRMG +RVT +NL+V +
Sbjct: 126 AMKRHGFAGQGAAHGNQAAHRRVGGIGACATPGRVFKGTRMAGRMGNDRVTTQNLKVQKI 185
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
D LIL+KG +PG + + V+ + K +
Sbjct: 186 DADANLILIKGAIPG-NRGGIVTVKTAVKGGAHA 218
>gi|13432203|sp|P30762|RL3_MYCLE RecName: Full=50S ribosomal protein L3
Length = 217
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 93/213 (43%), Positives = 126/213 (59%), Gaps = 3/213 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ KLGMT V++ R +PVTV+ V RTL+++GY AVQ+ GE + V
Sbjct: 3 RKGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTRIRTLERDGYSAVQLAYGEISPRKV 62
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+KP+ G ++S V+P++ L E R+ D VG + F VDVTG + GKG
Sbjct: 63 NKPVTGQYNSAGVNPRRYLAELRLDHPDAAAEYEVGQELTAEIFADATYVDVTGTSKGKG 122
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
FSG MKRH F G A+HG HR GS G P RVFK +MAGRMG +RVTV+NL V
Sbjct: 123 FSGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLV 182
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + G++L+KG VPG + ++VR + K
Sbjct: 183 HKVDTENGVLLIKGAVPG-RTGGLVMVRSAIKR 214
>gi|255020765|ref|ZP_05292823.1| LSU ribosomal protein L3p (L3e) [Acidithiobacillus caldus ATCC
51756]
gi|254969761|gb|EET27265.1| LSU ribosomal protein L3p (L3e) [Acidithiobacillus caldus ATCC
51756]
Length = 210
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 95/212 (44%), Positives = 137/212 (64%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT + + +GR +PVTV+ +D + +T +++GY AVQV GE + +
Sbjct: 1 MAIGLVGRKIGMTRIRSEDGRVVPVTVIQVDTNTITQIKTQERDGYTAVQVSTGERRPQR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+ + G + P + L EFR + +G F GQ VDVTG++ GKGF
Sbjct: 61 VTSALAGHYRRAGAQPGRVLREFR-DPGLEDPQLGQEIGLDIFNTGQRVDVTGISKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GA+KRHNF RA+HG S+SHR+ GS GCRQ PGRVFK KKMAG++G +VT NLE+V
Sbjct: 120 AGAIKRHNFRSNRASHGNSLSHRAPGSIGCRQTPGRVFKGKKMAGQLGNEQVTTLNLELV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+D +R L++VKG VPGA + ++VR + ++
Sbjct: 180 RIDAERRLLMVKGAVPGANQGD-VIVRPAVRA 210
>gi|237815652|ref|ZP_04594649.1| 50S ribosomal protein L3 [Brucella abortus str. 2308 A]
gi|17982696|gb|AAL51938.1| lsu ribosomal protein l3p [Brucella melitensis bv. 1 str. 16M]
gi|237788950|gb|EEP63161.1| 50S ribosomal protein L3 [Brucella abortus str. 2308 A]
Length = 245
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 138/219 (63%), Positives = 164/219 (74%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+KLGMT VYN G +PVTVL ++NC VV RT++KNGY AVQ+G G AKVKN
Sbjct: 9 MRSGVIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGMAKVKN 68
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SK MRG F+ V PK KL EFRV D+LL VG + +F GQ VDVTG +IGKGF
Sbjct: 69 TSKAMRGHFAKAEVEPKAKLAEFRVSP-DNLLEVGVEITAEHFVAGQKVDVTGTSIGKGF 127
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKRHNFGG RA+HG SI+HRSHGSTG RQDPG+VFK KKMAG MG RVT +N+EVV
Sbjct: 128 AGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 187
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
S D RGLILV+G VPG+ K +WILVRD+ K+++
Sbjct: 188 STDSDRGLILVRGAVPGS-KGAWILVRDAVKASLPENAP 225
>gi|15965109|ref|NP_385462.1| 50S ribosomal protein L3 [Sinorhizobium meliloti 1021]
gi|307314359|ref|ZP_07593965.1| 50S ribosomal protein L3 [Sinorhizobium meliloti BL225C]
gi|307322071|ref|ZP_07601447.1| 50S ribosomal protein L3 [Sinorhizobium meliloti AK83]
gi|42559675|sp|Q92QH0|RL3_RHIME RecName: Full=50S ribosomal protein L3
gi|15074289|emb|CAC45935.1| Probable 50S ribosomal protein L3 [Sinorhizobium meliloti 1021]
gi|306892253|gb|EFN23063.1| 50S ribosomal protein L3 [Sinorhizobium meliloti AK83]
gi|306899057|gb|EFN29699.1| 50S ribosomal protein L3 [Sinorhizobium meliloti BL225C]
Length = 228
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 144/215 (66%), Positives = 170/215 (79%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT VYN G IPVTVL L+NCQVV HRT +KNGY AVQ+GAG +KVKN
Sbjct: 1 MRSGVIAQKVGMTRVYNDAGEHIPVTVLRLENCQVVSHRTEEKNGYTAVQLGAGRSKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
K MRG F++ +V PK KL EFRV D+L+ +G+ + +F GQLVDVTG TIGKGF
Sbjct: 61 TPKAMRGHFAAASVEPKAKLVEFRVSA-DNLIDIGAELTAGHFVAGQLVDVTGTTIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GA+KRHNFGGLRATHGVS+SHRSHGSTG QDPGRV+K K+MAG MG RVT +NLEVV
Sbjct: 120 AGAIKRHNFGGLRATHGVSVSHRSHGSTGSNQDPGRVWKGKRMAGHMGQTRVTTQNLEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
S D+ RGLILVKG VPG+ K SWI+VRD+ KS
Sbjct: 180 STDEDRGLILVKGAVPGS-KGSWIVVRDAIKSGTP 213
>gi|312140918|ref|YP_004008254.1| 50S ribosomal protein l3 rplc [Rhodococcus equi 103S]
gi|325675444|ref|ZP_08155128.1| 50S ribosomal protein L3 [Rhodococcus equi ATCC 33707]
gi|311890257|emb|CBH49575.1| 50S ribosomal protein L3 RplC [Rhodococcus equi 103S]
gi|325553415|gb|EGD23093.1| 50S ribosomal protein L3 [Rhodococcus equi ATCC 33707]
Length = 217
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 88/214 (41%), Positives = 124/214 (57%), Gaps = 2/214 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT V++ R +PVTV+ V RT +++GY AVQ+ G + V+
Sbjct: 6 KGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTQIRTEERDGYSAVQLAFGAIDPRKVN 65
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP G F+ V+P++ + E RV D VG + F G VDVTG + GKGF+G
Sbjct: 66 KPTSGQFAKAGVTPRRHVVELRV-ADTSEYEVGQELTAEVFEDGAYVDVTGTSKGKGFAG 124
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F G A+HG HR GS G PGRVFK +M+GRMG +R+T +NL V V
Sbjct: 125 TMKRHGFAGQGASHGAQAVHRRPGSIGGCATPGRVFKGMRMSGRMGSDRITTQNLSVHKV 184
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
D + GL+L+KG +PG +K ++V+ + K +
Sbjct: 185 DAENGLLLIKGAIPG-RKGGLVIVKTAVKGGASA 217
>gi|167582623|ref|ZP_02375497.1| 50S ribosomal protein L3 [Burkholderia thailandensis TXDOH]
gi|167620737|ref|ZP_02389368.1| 50S ribosomal protein L3 [Burkholderia thailandensis Bt4]
Length = 219
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 99/212 (46%), Positives = 132/212 (62%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G +
Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP+ G + V + L EFR++ D L G+V P F VGQ VDV G++IGKG
Sbjct: 61 VTKPLAGHLAKAGVQAGEILKEFRIEADKAAELSNGAVIGPDLFEVGQKVDVQGVSIGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KR+NFG RA+HG S SH GS G QDPGRVF K+M G MG VTV+NLE+
Sbjct: 121 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+D R L+LVKG VPGA K + V + K
Sbjct: 181 ARIDADRKLLLVKGAVPGA-KGGKVFVTPAVK 211
>gi|254303420|ref|ZP_04970778.1| ribosomal protein L3 [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
gi|148323612|gb|EDK88862.1| ribosomal protein L3 [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
Length = 211
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 91/213 (42%), Positives = 134/213 (62%), Gaps = 3/213 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT ++ +G+ +PVTV+ V+ +T +K+GY+A+Q+G E K KN
Sbjct: 1 MSGILGKKIGMTQIF-EDGKFVPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNT 59
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+ G F+ V P++ + E V+ D +G Q VD+TG + GKG S
Sbjct: 60 TKPLMGIFNKAGVKPQRFVKELEVESVDG-YELGQEIKVDVLAEVQYVDITGTSKGKGTS 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRH FGG RA+HGVS +HR GS G PG+V K K+MAG+ G VTV+NL+VV
Sbjct: 119 GVMKRHGFGGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKRMAGQHGNATVTVQNLKVVK 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VD + L+L+KG VPGA KN ++++R + K +
Sbjct: 179 VDAEHNLLLIKGAVPGA-KNGYLVIRPAVKKVI 210
>gi|147676655|ref|YP_001210870.1| 50S ribosomal protein L3 [Pelotomaculum thermopropionicum SI]
gi|189042854|sp|A5D5J0|RL3_PELTS RecName: Full=50S ribosomal protein L3
gi|146272752|dbj|BAF58501.1| ribosomal protein L3 [Pelotomaculum thermopropionicum SI]
Length = 210
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 88/212 (41%), Positives = 124/212 (58%), Gaps = 4/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G +PVTV+ C VV +T +K+GY A+Q+G G K ++
Sbjct: 1 MPKGLLGKKVGMTQIFTDTGLAVPVTVIEAGPCIVVQKKTPEKDGYSAIQLGFGAKKERS 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KPM G F + V P + L E RV+ + VG F G+ VDV G T G+GF
Sbjct: 61 FNKPMLGHFLAARVRPLRYLREVRVENPE-TYQVGQEIKADIFAPGEKVDVVGTTKGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KRH F HG S HR GS G + P RVFK +++ G +G RVTV+NLEVV
Sbjct: 120 AGGIKRHGFHRGPMAHG-SKYHRRPGSLG-AKGPARVFKGRRLPGHLGMERVTVQNLEVV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD R L+ VKG VPG K +L++ + K+
Sbjct: 178 KVDADRNLLAVKGAVPGP-KGGLVLIKQAAKA 208
>gi|225076395|ref|ZP_03719594.1| hypothetical protein NEIFLAOT_01440 [Neisseria flavescens
NRL30031/H210]
gi|224952243|gb|EEG33452.1| hypothetical protein NEIFLAOT_01440 [Neisseria flavescens
NRL30031/H210]
Length = 214
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 103/212 (48%), Positives = 134/212 (63%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K
Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+K G F+ V + L EF + ++ L G + S F VGQLVDVTG + GKG
Sbjct: 61 VNKTEAGHFAKAGVEAGRGLVEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEV
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
V VD +R L+LVKG VPG+ NS ++VR S K
Sbjct: 181 VRVDAERQLLLVKGAVPGSV-NSDVVVRPSVK 211
>gi|311740077|ref|ZP_07713911.1| 50S ribosomal protein L3 [Corynebacterium pseudogenitalium ATCC
33035]
gi|311305150|gb|EFQ81219.1| 50S ribosomal protein L3 [Corynebacterium pseudogenitalium ATCC
33035]
Length = 218
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 85/214 (39%), Positives = 123/214 (57%), Gaps = 2/214 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ +KLGMT V++ + R +PVTV+ C V RT + +GY A+Q+ GE + +
Sbjct: 7 KGILGKKLGMTQVFDEDNRVVPVTVVEAGPCVVTQIRTPETDGYSAIQIAFGEIDPRKAN 66
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP+ G F V+P++ + E R+ D VG F VDVTG T G G++G
Sbjct: 67 KPVGGHFKKAGVTPRRHVAEIRMD-DTSAYEVGQEVKVDIFEGITFVDVTGKTKGHGYAG 125
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
AMKRH F G A HG +HR G G PGRVFK K+MAGRMG +RVT +NL++ +
Sbjct: 126 AMKRHGFAGQGAAHGNQAAHRRVGGIGGAATPGRVFKGKRMAGRMGHDRVTTQNLKIQKI 185
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
D + L+L+KG +PGA + + V+ + K +
Sbjct: 186 DAESNLLLIKGAIPGA-RGGLVTVKTAVKGGAHA 218
>gi|261364855|ref|ZP_05977738.1| 50S ribosomal protein L3 [Neisseria mucosa ATCC 25996]
gi|261378041|ref|ZP_05982614.1| 50S ribosomal protein L3 [Neisseria cinerea ATCC 14685]
gi|298370591|ref|ZP_06981906.1| 50S ribosomal protein L3 [Neisseria sp. oral taxon 014 str. F0314]
gi|269145491|gb|EEZ71909.1| 50S ribosomal protein L3 [Neisseria cinerea ATCC 14685]
gi|288566904|gb|EFC88464.1| 50S ribosomal protein L3 [Neisseria mucosa ATCC 25996]
gi|298281201|gb|EFI22691.1| 50S ribosomal protein L3 [Neisseria sp. oral taxon 014 str. F0314]
Length = 214
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 104/212 (49%), Positives = 134/212 (63%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K
Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDADGYTAVQVTFGQKKANR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+K G F+ V + L EF + ++ L G + S F VGQLVDVTG + GKG
Sbjct: 61 VNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEV
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
V VD +R L+LVKG VPGA NS ++VR S K
Sbjct: 181 VRVDAERQLLLVKGAVPGAV-NSDVVVRPSVK 211
>gi|86749415|ref|YP_485911.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris HaA2]
gi|109893547|sp|Q2IXR0|RL3_RHOP2 RecName: Full=50S ribosomal protein L3
gi|86572443|gb|ABD07000.1| LSU ribosomal protein L3P [Rhodopseudomonas palustris HaA2]
Length = 241
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 128/219 (58%), Positives = 159/219 (72%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT V+ G IPVTVL L NCQV+ HRT +KNGY+A+Q+G+G K
Sbjct: 1 MRSGVIAQKVGMTRVFTETGEHIPVTVLKLGNCQVLAHRTTEKNGYVALQLGSGARKTVY 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+ K RG F+ V PK+K+ EFRV + D L+PVG+ +F VGQ VDVTG ++GKGF
Sbjct: 61 MPKAERGQFAVAKVEPKRKVAEFRVSE-DALIPVGAEIQADHFVVGQFVDVTGTSVGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR NFGGLRATHGVS+SHRS GSTG RQDPG+ FKNKKM G MG +R+T NL VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
+D +RGLILV+G VPG+ K WI VRD+ K A+
Sbjct: 180 QLDVERGLILVEGAVPGS-KGGWISVRDAVKKALPADAP 217
>gi|221069450|ref|ZP_03545555.1| ribosomal protein L3 [Comamonas testosteroni KF-1]
gi|264676442|ref|YP_003276348.1| ribosomal protein L3 [Comamonas testosteroni CNB-2]
gi|299531236|ref|ZP_07044647.1| 50S ribosomal protein L3 [Comamonas testosteroni S44]
gi|220714473|gb|EED69841.1| ribosomal protein L3 [Comamonas testosteroni KF-1]
gi|262206954|gb|ACY31052.1| ribosomal protein L3 [Comamonas testosteroni CNB-2]
gi|298720819|gb|EFI61765.1| 50S ribosomal protein L3 [Comamonas testosteroni S44]
Length = 224
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 88/220 (40%), Positives = 126/220 (57%), Gaps = 3/220 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GM ++ +G +PVTV+ + N +V +T + +GY+A+QV G K V
Sbjct: 6 SLGLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQVKTQENDGYVALQVTFGARKASRV 65
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVF--SPSYFTVGQLVDVTGMTIGKG 119
+KP G + V + EFRV + F+VGQ VDV G +IGKG
Sbjct: 66 TKPQAGHLAKAGVEAGEVTREFRVTDETAGKYAAGAVLPVAELFSVGQKVDVQGTSIGKG 125
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KRHNF RA+HG S SH GS G QDPGRVF K+M G MG VT +NL+V
Sbjct: 126 YAGTIKRHNFSSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTTQNLDV 185
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
V +D+ R L+L+KG +PGA K ++ VR + K+ +
Sbjct: 186 VRIDEARQLLLIKGAIPGA-KGGFVSVRPAIKAKASKGAN 224
>gi|257470826|ref|ZP_05634916.1| 50S ribosomal protein L3P [Fusobacterium ulcerans ATCC 49185]
Length = 208
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 91/211 (43%), Positives = 134/211 (63%), Gaps = 3/211 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++A+K+GMT ++ +G+ IPVTV+ V+ +T++ +GY A+Q+G E K KN
Sbjct: 1 MSGILAKKIGMTQIF-EDGKFIPVTVVEAGPNYVLQKKTVENDGYTALQLGFDEKKEKNT 59
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+ G F V+P++ + E RV + +G + VD+TG + GKG +
Sbjct: 60 TKPIMGIFKKAGVNPQRFVKELRVDSVEG-FELGQEIKADVLAEVEYVDITGTSKGKGTA 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRHNF G RA+HGVS +HR GS G PG+V + KKMAG+ G VTV+NL+VV
Sbjct: 119 GVMKRHNFAGNRASHGVSRNHRLGGSIGMSSWPGKVLRGKKMAGQYGNATVTVQNLKVVK 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + L+L+KG VPG+ KNS+I+V+ + K
Sbjct: 179 VDVENNLLLIKGAVPGS-KNSYIVVKPAVKK 208
>gi|300779845|ref|ZP_07089701.1| 50S ribosomal protein L3 [Corynebacterium genitalium ATCC 33030]
gi|300533955|gb|EFK55014.1| 50S ribosomal protein L3 [Corynebacterium genitalium ATCC 33030]
Length = 217
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 87/214 (40%), Positives = 123/214 (57%), Gaps = 2/214 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ RKLGMT +++ E R IPVTV+ C V RT + +GY A+Q+ G+ +
Sbjct: 6 KGILGRKLGMTQIFDEENRVIPVTVVEAGPCVVTQIRTEETDGYSAIQIAYGDIDPRKAK 65
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP G + +P++ + E R+ D +G + + F VDV G T GKG++G
Sbjct: 66 KPQAGHYQKAGQNPRRHVAEIRMD-DTSAYELGQEVTVNIFDGDTFVDVAGTTKGKGYAG 124
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
AMKRH F G A HG +HR GS G PGRVFK K+MAGRMG NRVT +NL++ +
Sbjct: 125 AMKRHGFAGQGAAHGNQAAHRRVGSIGGCATPGRVFKGKRMAGRMGSNRVTTQNLKIQRI 184
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
D L+L+KG +PGA K S + V+ + K +
Sbjct: 185 DGDSNLLLIKGAIPGA-KGSLVTVKTAVKGGAHA 217
>gi|150396207|ref|YP_001326674.1| 50S ribosomal protein L3 [Sinorhizobium medicae WSM419]
gi|166234597|sp|A6U859|RL3_SINMW RecName: Full=50S ribosomal protein L3
gi|150027722|gb|ABR59839.1| ribosomal protein L3 [Sinorhizobium medicae WSM419]
Length = 228
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 144/215 (66%), Positives = 169/215 (78%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT VYN G IPVTVL L+NCQVV RT +KNGY AVQ+GAG +KVKN
Sbjct: 1 MRSGVIAQKVGMTRVYNDAGEHIPVTVLRLENCQVVAQRTEEKNGYTAVQLGAGRSKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
K MRG F++ +V PK KL EFRV D+L+ +GS + +F GQLVDVTG TIGKGF
Sbjct: 61 TPKAMRGHFAAASVEPKAKLVEFRVSA-DNLIDIGSELTAGHFVAGQLVDVTGTTIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GA+KRHNFGGLRATHGVS+SHRSHGSTG QDPGRV+K K+MAG MG RVT +NLEVV
Sbjct: 120 AGAIKRHNFGGLRATHGVSVSHRSHGSTGSNQDPGRVWKGKRMAGHMGQTRVTTQNLEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
S D+ RGLILVKG VPG+ K SWI+VRD+ KS
Sbjct: 180 STDEDRGLILVKGAVPGS-KGSWIVVRDAIKSGTP 213
>gi|291544460|emb|CBL17569.1| LSU ribosomal protein L3P [Ruminococcus sp. 18P13]
Length = 211
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 91/213 (42%), Positives = 132/213 (61%), Gaps = 3/213 (1%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
M+ G++ +K+GMT +++ G+ IPVTV+ C VV +T++ +GY A+Q+G + K +
Sbjct: 1 MQKGIIGKKIGMTQIFDQEAGKVIPVTVVEAGPCVVVQKKTVENDGYAALQIGFDDVKAQ 60
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
++KPM+G F V K+ L EFR+ D L VG + F VG +VDV+G + GKG
Sbjct: 61 RINKPMKGHFDKSEVGYKRVLKEFRLDDCDA-LNVGDLLKADTFAVGDIVDVSGTSKGKG 119
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+GA+KRHN L+ THG HR GS G P R++K K MAG MG +VTV+NLEV
Sbjct: 120 FTGAIKRHNQHRLKETHGTGPVHRQAGSMGACSSPSRIYKGKGMAGHMGAEKVTVQNLEV 179
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V +D + LI +KG +PG K + + DS K+
Sbjct: 180 VKIDVENNLIALKGAIPGP-KGGVVCITDSVKA 211
>gi|296313365|ref|ZP_06863306.1| 50S ribosomal protein L3 [Neisseria polysaccharea ATCC 43768]
gi|296840076|gb|EFH24014.1| 50S ribosomal protein L3 [Neisseria polysaccharea ATCC 43768]
Length = 214
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 104/212 (49%), Positives = 135/212 (63%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY+AVQV G+ K
Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYIAVQVTFGQKKANR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+K G F+ V + L EF + ++ L G + S F VGQLVDVTG + GKG
Sbjct: 61 VNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEV
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
V VD +R L+LVKG VPGA NS ++VR S K
Sbjct: 181 VRVDAERQLLLVKGAVPGAV-NSDVVVRPSVK 211
>gi|148256392|ref|YP_001240977.1| 50S ribosomal protein L3 [Bradyrhizobium sp. BTAi1]
gi|166233120|sp|A5ELM7|RL3_BRASB RecName: Full=50S ribosomal protein L3
gi|146408565|gb|ABQ37071.1| LSU ribosomal protein L3P [Bradyrhizobium sp. BTAi1]
Length = 239
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 130/219 (59%), Positives = 158/219 (72%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT V+ G IPVTVL L NCQVV HRT +KNGY+A+Q+G+G K
Sbjct: 1 MRSGVIAQKVGMTRVFTETGEHIPVTVLKLGNCQVVGHRTTEKNGYVALQLGSGSRKTVY 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+ K RG F+ V PK+K+ EFRV + D L+PVG+ +F VGQ VDVTG T+GKGF
Sbjct: 61 MPKAERGQFAVAKVEPKRKVAEFRVSE-DSLIPVGAEILADHFVVGQFVDVTGTTVGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ +KNKKM G MG +RVT NL VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTWKNKKMPGHMGVDRVTTLNLRVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
D +RGLILV+G VPG+ K WI VRD+ K + +
Sbjct: 180 QTDVERGLILVEGAVPGS-KGGWISVRDAVKKPLPKEAP 217
>gi|158424178|ref|YP_001525470.1| 50S ribosomal protein L3 [Azorhizobium caulinodans ORS 571]
gi|158331067|dbj|BAF88552.1| ribosomal protein L3 [Azorhizobium caulinodans ORS 571]
Length = 248
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 133/219 (60%), Positives = 162/219 (73%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+KLGMT ++ G +PVTVL +++CQVV HRTLDKNGY+AVQ+GAG+ K KN
Sbjct: 8 MRSGVIAQKLGMTRIFTDAGEHLPVTVLKVESCQVVAHRTLDKNGYVAVQLGAGKRKPKN 67
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+K RG F+ V PK+KL EFRV D L+PVG+ + +F VGQ VDVTG TIGKGF
Sbjct: 68 TNKAERGQFARAEVEPKRKLAEFRVDA-DALIPVGAEITADHFVVGQYVDVTGTTIGKGF 126
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKRHNFGGLRA+HGVSISHRS GSTG RQDPG+ FKNKKM G MG VT +NL+VV
Sbjct: 127 AGGMKRHNFGGLRASHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHMGDVTVTTQNLKVV 186
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
D +RGLI V+G VPG WI+VRD+ K + +
Sbjct: 187 MTDVERGLIAVEGAVPG-HAGGWIMVRDAVKKRLPSEAP 224
>gi|261380559|ref|ZP_05985132.1| 50S ribosomal protein L3 [Neisseria subflava NJ9703]
gi|284796527|gb|EFC51874.1| 50S ribosomal protein L3 [Neisseria subflava NJ9703]
Length = 214
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 104/212 (49%), Positives = 136/212 (64%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K
Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+K G F+ +V + L EF + ++ L VG + S F VGQLVDVTG + GKG
Sbjct: 61 VNKTEAGHFAKASVEAGRGLVEFALTEEKLAELKVGDEITVSMFEVGQLVDVTGTSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEV
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
V VD +R L+LVKG VPG+ NS ++VR S K
Sbjct: 181 VRVDAERQLLLVKGAVPGSV-NSDVVVRPSVK 211
>gi|254822787|ref|ZP_05227788.1| 50S ribosomal protein L3 [Mycobacterium intracellulare ATCC 13950]
Length = 217
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 92/213 (43%), Positives = 127/213 (59%), Gaps = 3/213 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ KLGMT V++ R +PVTV+ V RT +++GY AVQ+ GE + V
Sbjct: 3 RKGILGTKLGMTQVFDENNRIVPVTVVKAGPNVVTRIRTPEQDGYSAVQLAYGEISPRKV 62
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+KP+ G +++ V+P++ L E R+ D VG + FT G VDVTG + GKG
Sbjct: 63 NKPVTGQYAAAGVNPRRFLAELRLDNPDAAAEYQVGQELTAEIFTDGSYVDVTGTSKGKG 122
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G MKRH F G A+HG HR GS G P RVFK +MAGRMG +RVTV+NL V
Sbjct: 123 FAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLV 182
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + G++L+KG VPG + ++VR + K
Sbjct: 183 HKVDTENGVLLIKGAVPG-RTGGLVVVRSAVKR 214
>gi|237742672|ref|ZP_04573153.1| LSU ribosomal protein L3P [Fusobacterium sp. 4_1_13]
gi|256846067|ref|ZP_05551525.1| 50S ribosomal protein L3 [Fusobacterium sp. 3_1_36A2]
gi|294784802|ref|ZP_06750090.1| 50S ribosomal protein L3 [Fusobacterium sp. 3_1_27]
gi|229430320|gb|EEO40532.1| LSU ribosomal protein L3P [Fusobacterium sp. 4_1_13]
gi|256719626|gb|EEU33181.1| 50S ribosomal protein L3 [Fusobacterium sp. 3_1_36A2]
gi|294486516|gb|EFG33878.1| 50S ribosomal protein L3 [Fusobacterium sp. 3_1_27]
Length = 211
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 90/213 (42%), Positives = 134/213 (62%), Gaps = 3/213 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT ++ +G+ +PVTV+ V+ +T +K+GY+A+Q+G E K KN
Sbjct: 1 MSGILGKKIGMTQIF-EDGKFVPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNT 59
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+ G F+ V P++ + E V+ D +G + VD+TG + GKG S
Sbjct: 60 TKPLMGIFNKAGVKPQRFVKELAVESVDG-YELGQEIKVDVLAEVEYVDITGTSKGKGTS 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRH FGG RA+HGVS +HR GS G PG+V K K+MAG+ G VTV+NL+VV
Sbjct: 119 GVMKRHGFGGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKRMAGQHGNATVTVQNLKVVK 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VD + L+L+KG VPGA KN ++++R + K +
Sbjct: 179 VDAEHNLLLIKGAVPGA-KNGYLVIRPAVKKVI 210
>gi|225627703|ref|ZP_03785740.1| 50S ribosomal protein L3 [Brucella ceti str. Cudo]
gi|225617708|gb|EEH14753.1| 50S ribosomal protein L3 [Brucella ceti str. Cudo]
Length = 245
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 138/219 (63%), Positives = 164/219 (74%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+KLGMT VYN G +PVTVL ++NC VV RT++KNGY AVQ+G G AKVKN
Sbjct: 9 MRSGVIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGMAKVKN 68
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SK MRG F+ V PK KL EFRV D+LL VG + +F GQ VDVTG +IGKGF
Sbjct: 69 TSKAMRGHFAKAEVEPKAKLAEFRVSP-DNLLEVGVEITAEHFVAGQKVDVTGTSIGKGF 127
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKRHNFGG RA+HG SI+HRSHGSTG RQDPG+VFK KKMAG MG RVT +N+EVV
Sbjct: 128 AGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 187
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
S D RGLILV+G VPG+ K +WILVRD+ K+++
Sbjct: 188 STDSDRGLILVRGAVPGS-KGAWILVRDAVKASLPENAP 225
>gi|29653590|ref|NP_819282.1| LSU ribosomal protein L3P [Coxiella burnetii RSA 493]
gi|161830671|ref|YP_001596185.1| 50S ribosomal protein L3 [Coxiella burnetii RSA 331]
gi|212213250|ref|YP_002304186.1| 50S ribosomal protein L3 [Coxiella burnetii CbuG_Q212]
gi|42559616|sp|Q83ES4|RL3_COXBU RecName: Full=50S ribosomal protein L3
gi|189042841|sp|A9NAM4|RL3_COXBR RecName: Full=50S ribosomal protein L3
gi|226725157|sp|B6J263|RL3_COXB2 RecName: Full=50S ribosomal protein L3
gi|29540852|gb|AAO89796.1| LSU ribosomal protein L3P [Coxiella burnetii RSA 493]
gi|161762538|gb|ABX78180.1| ribosomal protein L3 [Coxiella burnetii RSA 331]
gi|212011660|gb|ACJ19041.1| LSU ribosomal protein L3P [Coxiella burnetii CbuG_Q212]
Length = 217
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 88/214 (41%), Positives = 126/214 (58%), Gaps = 1/214 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK GMT ++ G IPVTV+ + ++ +T++ +GY A QV G+
Sbjct: 1 MSIGLIGRKCGMTRIFTETGSSIPVTVVEVILNRITQVKTVETDGYRAFQVAYGKKSSAR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP+ G +S V L EFR+ ++ G F GQ+VDV G+T GKG
Sbjct: 61 VNKPLAGHYSKAAVEAGNALREFRLGNEELTEAKAGDELKVDIFKEGQVVDVRGLTRGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G +KRHNF ATHG S+SHR+ GS G Q PGRV+K KKMAG++G TV++ E+
Sbjct: 121 FAGTVKRHNFRTQDATHGNSLSHRAPGSIGQCQTPGRVWKGKKMAGQLGNVYCTVQSQEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+ VD +R L+L+KG +PGA I+ + S K
Sbjct: 181 IKVDVERNLLLIKGALPGAPGGEVIITQSSKKRK 214
>gi|167748430|ref|ZP_02420557.1| hypothetical protein ANACAC_03174 [Anaerostipes caccae DSM 14662]
gi|317472037|ref|ZP_07931369.1| 50S ribosomal protein L3 [Anaerostipes sp. 3_2_56FAA]
gi|167652422|gb|EDR96551.1| hypothetical protein ANACAC_03174 [Anaerostipes caccae DSM 14662]
gi|316900441|gb|EFV22423.1| 50S ribosomal protein L3 [Anaerostipes sp. 3_2_56FAA]
Length = 209
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 91/212 (42%), Positives = 127/212 (59%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++ K+GMT ++N +G PVTVL C V +T + +GY AVQVG + K K+
Sbjct: 1 MKKAILTTKVGMTQIFNEDGVLTPVTVLQAGPCVVTQVKTEENDGYEAVQVGFADKKEKS 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP +G F V+PKK + EF+ ++ VG F G +D T + GKG+
Sbjct: 61 VNKPEKGHFDKAGVAPKKFVREFK-FENASEYTVGQEIKADIFEAGDKIDATATSKGKGY 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KRH THG S HR GS G DP +VFK KKM G+MG RVT++NLEVV
Sbjct: 120 AGGIKRHGLSTGPKTHG-SKYHRHAGSNGMASDPSKVFKGKKMPGQMGSERVTIQNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + +ILVKG VPG KK S +++++S K+
Sbjct: 179 KVDAENNIILVKGAVPGPKK-SLVMLKESVKA 209
>gi|111023096|ref|YP_706068.1| 50S ribosomal protein L3 [Rhodococcus jostii RHA1]
gi|226365595|ref|YP_002783378.1| 50S ribosomal protein L3 [Rhodococcus opacus B4]
gi|123339772|sp|Q0S3H6|RL3_RHOSR RecName: Full=50S ribosomal protein L3
gi|254803687|sp|C1B012|RL3_RHOOB RecName: Full=50S ribosomal protein L3
gi|110822626|gb|ABG97910.1| 50S ribosomal protein L3 [Rhodococcus jostii RHA1]
gi|226244085|dbj|BAH54433.1| 50S ribosomal protein L3 [Rhodococcus opacus B4]
Length = 218
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 88/214 (41%), Positives = 123/214 (57%), Gaps = 2/214 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT V++ R +PVTV+ V RT +++GY AVQ+ G + V+
Sbjct: 7 KGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTQIRTEERDGYSAVQLAFGAIDPRKVN 66
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP G F+ V+P++ + E RV D VG + F G VDVTG + GKGF+G
Sbjct: 67 KPTSGQFAKAGVTPRRHVVELRV-ADTSEYEVGQELTAEVFEDGAYVDVTGTSKGKGFAG 125
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F G A+HG HR GS G PGRVFK +M+GRMG +R+T +NL V V
Sbjct: 126 TMKRHGFAGQGASHGAQAVHRRPGSIGGCATPGRVFKGMRMSGRMGSDRITTQNLSVHKV 185
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
D + GL+L+KG +PG +K ++V+ + K
Sbjct: 186 DAENGLLLIKGAIPG-RKGGLVIVKSAVKGGARA 218
>gi|90417763|ref|ZP_01225675.1| ribosomal protein L3 [Aurantimonas manganoxydans SI85-9A1]
gi|90337435|gb|EAS51086.1| ribosomal protein L3 [Aurantimonas manganoxydans SI85-9A1]
Length = 241
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 140/219 (63%), Positives = 173/219 (78%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT VYN G +PVTVL ++N QVV RT +KNGY AVQVGAG AKVKN
Sbjct: 1 MRSGVIAQKVGMTRVYNDVGEHVPVTVLKVENLQVVAQRTKEKNGYTAVQVGAGLAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SKPMRG F+ +V PK+KL EFRV DD+++ VG+ + +F GQ+VDVTG +IGKGF
Sbjct: 61 TSKPMRGVFAQASVEPKRKLVEFRVS-DDNMIDVGAEITAEHFVPGQMVDVTGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRHNFGGLRATHGVS+SHRSHGSTG RQDPG+VFKNKKMAG MG RVT +NL+VV
Sbjct: 120 AGAMKRHNFGGLRATHGVSVSHRSHGSTGQRQDPGKVFKNKKMAGHMGDVRVTTQNLQVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
+D ++GLILV+G VPG+ K WI +RD+ K+++
Sbjct: 180 RIDPEKGLILVRGAVPGS-KGGWIEIRDAVKASLPDNAP 217
>gi|120402316|ref|YP_952145.1| 50S ribosomal protein L3 [Mycobacterium vanbaalenii PYR-1]
gi|166233168|sp|A1T4N9|RL3_MYCVP RecName: Full=50S ribosomal protein L3
gi|119955134|gb|ABM12139.1| LSU ribosomal protein L3P [Mycobacterium vanbaalenii PYR-1]
Length = 218
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 87/217 (40%), Positives = 127/217 (58%), Gaps = 3/217 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ KLGMT V++ + +PVTV+ V RT +++GY AVQ+ GE + V
Sbjct: 3 RKGILGTKLGMTQVFDENNKVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKV 62
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+KP+ G +++ V+P++ L E R+ + VG + F G VDVTG + GKG
Sbjct: 63 NKPVTGQYAAAGVNPRRHLAELRLDDEAAAAEYEVGQELTAEIFADGAYVDVTGTSKGKG 122
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G MKRH F G A+HG HR GS G PGRVFK +M+GRMG +RVT +NL+V
Sbjct: 123 FAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPGRVFKGTRMSGRMGSDRVTTQNLKV 182
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
VD + G++L+KG +PG + ++VR + K
Sbjct: 183 HKVDAENGVLLIKGAIPG-RNGGLVVVRSAIKRGEKA 218
>gi|62290144|ref|YP_221937.1| 50S ribosomal protein L3 [Brucella abortus bv. 1 str. 9-941]
gi|82700067|ref|YP_414641.1| 50S ribosomal protein L3 [Brucella melitensis biovar Abortus 2308]
gi|161511150|ref|NP_539674.2| 50S ribosomal protein L3 [Brucella melitensis bv. 1 str. 16M]
gi|189024382|ref|YP_001935150.1| Ribosomal protein L3 [Brucella abortus S19]
gi|225852730|ref|YP_002732963.1| 50S ribosomal protein L3 [Brucella melitensis ATCC 23457]
gi|254689453|ref|ZP_05152707.1| 50S ribosomal protein L3 [Brucella abortus bv. 6 str. 870]
gi|254693938|ref|ZP_05155766.1| 50S ribosomal protein L3 [Brucella abortus bv. 3 str. Tulya]
gi|254697588|ref|ZP_05159416.1| 50S ribosomal protein L3 [Brucella abortus bv. 2 str. 86/8/59]
gi|254730482|ref|ZP_05189060.1| 50S ribosomal protein L3 [Brucella abortus bv. 4 str. 292]
gi|256044883|ref|ZP_05447787.1| 50S ribosomal protein L3 [Brucella melitensis bv. 1 str. Rev.1]
gi|256113787|ref|ZP_05454591.1| 50S ribosomal protein L3 [Brucella melitensis bv. 3 str. Ether]
gi|256257699|ref|ZP_05463235.1| 50S ribosomal protein L3 [Brucella abortus bv. 9 str. C68]
gi|256263780|ref|ZP_05466312.1| ribosomal protein L3 [Brucella melitensis bv. 2 str. 63/9]
gi|260546692|ref|ZP_05822431.1| ribosomal protein L3 [Brucella abortus NCTC 8038]
gi|260565515|ref|ZP_05835999.1| ribosomal protein L3 [Brucella melitensis bv. 1 str. 16M]
gi|260754976|ref|ZP_05867324.1| 50S ribosomal protein L3 [Brucella abortus bv. 6 str. 870]
gi|260758192|ref|ZP_05870540.1| 50S ribosomal protein L3 [Brucella abortus bv. 4 str. 292]
gi|260762018|ref|ZP_05874361.1| 50S ribosomal protein L3 [Brucella abortus bv. 2 str. 86/8/59]
gi|260883985|ref|ZP_05895599.1| 50S ribosomal protein L3 [Brucella abortus bv. 9 str. C68]
gi|261214230|ref|ZP_05928511.1| 50S ribosomal protein L3 [Brucella abortus bv. 3 str. Tulya]
gi|265991310|ref|ZP_06103867.1| 50S ribosomal protein L3 [Brucella melitensis bv. 1 str. Rev.1]
gi|265995147|ref|ZP_06107704.1| 50S ribosomal protein L3 [Brucella melitensis bv. 3 str. Ether]
gi|297248539|ref|ZP_06932257.1| 50S ribosomal protein L3 [Brucella abortus bv. 5 str. B3196]
gi|42559669|sp|Q8YHP0|RL3_BRUME RecName: Full=50S ribosomal protein L3
gi|81309408|sp|Q57CQ8|RL3_BRUAB RecName: Full=50S ribosomal protein L3
gi|109893414|sp|Q2YM03|RL3_BRUA2 RecName: Full=50S ribosomal protein L3
gi|226725140|sp|B2S679|RL3_BRUA1 RecName: Full=50S ribosomal protein L3
gi|254803659|sp|C0RJK1|RL3_BRUMB RecName: Full=50S ribosomal protein L3
gi|62196276|gb|AAX74576.1| RplC, ribosomal protein L3 [Brucella abortus bv. 1 str. 9-941]
gi|82616168|emb|CAJ11211.1| Ribosomal protein L3 [Brucella melitensis biovar Abortus 2308]
gi|189019954|gb|ACD72676.1| Ribosomal protein L3 [Brucella abortus S19]
gi|225641095|gb|ACO01009.1| 50S ribosomal protein L3 [Brucella melitensis ATCC 23457]
gi|260095742|gb|EEW79619.1| ribosomal protein L3 [Brucella abortus NCTC 8038]
gi|260151583|gb|EEW86677.1| ribosomal protein L3 [Brucella melitensis bv. 1 str. 16M]
gi|260668510|gb|EEX55450.1| 50S ribosomal protein L3 [Brucella abortus bv. 4 str. 292]
gi|260672450|gb|EEX59271.1| 50S ribosomal protein L3 [Brucella abortus bv. 2 str. 86/8/59]
gi|260675084|gb|EEX61905.1| 50S ribosomal protein L3 [Brucella abortus bv. 6 str. 870]
gi|260873513|gb|EEX80582.1| 50S ribosomal protein L3 [Brucella abortus bv. 9 str. C68]
gi|260915837|gb|EEX82698.1| 50S ribosomal protein L3 [Brucella abortus bv. 3 str. Tulya]
gi|262766260|gb|EEZ12049.1| 50S ribosomal protein L3 [Brucella melitensis bv. 3 str. Ether]
gi|263002094|gb|EEZ14669.1| 50S ribosomal protein L3 [Brucella melitensis bv. 1 str. Rev.1]
gi|263093908|gb|EEZ17842.1| ribosomal protein L3 [Brucella melitensis bv. 2 str. 63/9]
gi|297175708|gb|EFH35055.1| 50S ribosomal protein L3 [Brucella abortus bv. 5 str. B3196]
gi|326409255|gb|ADZ66320.1| Ribosomal protein L3 [Brucella melitensis M28]
gi|326538963|gb|ADZ87178.1| 50S ribosomal protein L3 [Brucella melitensis M5-90]
Length = 237
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 138/219 (63%), Positives = 164/219 (74%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+KLGMT VYN G +PVTVL ++NC VV RT++KNGY AVQ+G G AKVKN
Sbjct: 1 MRSGVIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGMAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SK MRG F+ V PK KL EFRV D+LL VG + +F GQ VDVTG +IGKGF
Sbjct: 61 TSKAMRGHFAKAEVEPKAKLAEFRVSP-DNLLEVGVEITAEHFVAGQKVDVTGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKRHNFGG RA+HG SI+HRSHGSTG RQDPG+VFK KKMAG MG RVT +N+EVV
Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
S D RGLILV+G VPG+ K +WILVRD+ K+++
Sbjct: 180 STDSDRGLILVRGAVPGS-KGAWILVRDAVKASLPENAP 217
>gi|2344833|emb|CAB11435.1| ribosomal protein L3 [Mycobacterium leprae]
Length = 217
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 93/213 (43%), Positives = 125/213 (58%), Gaps = 3/213 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ KLGMT V++ R +PVTV+ V RTL+ +GY AVQ+ GE + V
Sbjct: 3 RKGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTRIRTLEPDGYSAVQLAYGEISPRKV 62
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+KP+ G ++S V+P++ L E R+ D VG + F VDVTG + GKG
Sbjct: 63 NKPVTGQYNSAGVNPRRYLAELRLDHPDAAAEYEVGQELTAEIFADATYVDVTGTSKGKG 122
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
FSG MKRH F G A+HG HR GS G P RVFK +MAGRMG +RVTV+NL V
Sbjct: 123 FSGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLV 182
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + G++L+KG VPG + ++VR + K
Sbjct: 183 HKVDTENGVLLIKGAVPG-RTGGLVMVRSAIKR 214
>gi|256159968|ref|ZP_05457686.1| 50S ribosomal protein L3 [Brucella ceti M490/95/1]
gi|256255199|ref|ZP_05460735.1| 50S ribosomal protein L3 [Brucella ceti B1/94]
gi|261222395|ref|ZP_05936676.1| 50S ribosomal protein L3 [Brucella ceti B1/94]
gi|265998360|ref|ZP_06110917.1| 50S ribosomal protein L3 [Brucella ceti M490/95/1]
gi|260920979|gb|EEX87632.1| 50S ribosomal protein L3 [Brucella ceti B1/94]
gi|262552828|gb|EEZ08818.1| 50S ribosomal protein L3 [Brucella ceti M490/95/1]
Length = 237
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 137/219 (62%), Positives = 163/219 (74%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+KLGMT VYN G +PVTVL ++NC VV RT++KNGY AVQ+G G AKVKN
Sbjct: 1 MRSGVIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGMAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SK MRG F+ V PK KL EFRV D+LL VG + +F GQ VDVTG +IGKGF
Sbjct: 61 TSKAMRGHFAKAEVEPKAKLAEFRVSP-DNLLEVGVEITAEHFVAGQKVDVTGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKRHNFGG A+HG SI+HRSHGSTG RQDPG+VFK KKMAG MG RVT +N+EVV
Sbjct: 120 AGVMKRHNFGGHHASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
S D RGLILV+G VPG+ K +WILVRD+ K+++
Sbjct: 180 STDSDRGLILVRGAVPGS-KGAWILVRDAVKASLPENAP 217
>gi|15828002|ref|NP_302265.1| 50S ribosomal protein L3 [Mycobacterium leprae TN]
gi|221230479|ref|YP_002503895.1| 50S ribosomal protein L3 [Mycobacterium leprae Br4923]
gi|13093555|emb|CAC30817.1| 50S ribosomal protein L3 [Mycobacterium leprae]
gi|219933586|emb|CAR71959.1| 50S ribosomal protein L3 [Mycobacterium leprae Br4923]
Length = 218
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 93/213 (43%), Positives = 126/213 (59%), Gaps = 3/213 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ KLGMT V++ R +PVTV+ V RTL+++GY AVQ+ GE + V
Sbjct: 4 RKGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTRIRTLERDGYSAVQLAYGEISPRKV 63
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+KP+ G ++S V+P++ L E R+ D VG + F VDVTG + GKG
Sbjct: 64 NKPVTGQYNSAGVNPRRYLAELRLDHPDAAAEYEVGQELTAEIFADATYVDVTGTSKGKG 123
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
FSG MKRH F G A+HG HR GS G P RVFK +MAGRMG +RVTV+NL V
Sbjct: 124 FSGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLV 183
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + G++L+KG VPG + ++VR + K
Sbjct: 184 HKVDTENGVLLIKGAVPG-RTGGLVMVRSAIKR 215
>gi|117924155|ref|YP_864772.1| 50S ribosomal protein L3P [Magnetococcus sp. MC-1]
gi|212288406|sp|A0L5X3|RL3_MAGSM RecName: Full=50S ribosomal protein L3
gi|117607911|gb|ABK43366.1| LSU ribosomal protein L3P [Magnetococcus sp. MC-1]
Length = 214
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 105/212 (49%), Positives = 140/212 (66%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSG++ RKLGM+ ++ +G+RIPVT++ L C VV R+ +++GY AVQ+G EAK
Sbjct: 1 MRSGLIGRKLGMSQMFTEDGQRIPVTLVQLGPCAVVAKRSDEQDGYNAVQLGFEEAKPSR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+SK +RG ++ NV+P++ L EFRV + VG + F V VDVTG T+GKGF
Sbjct: 61 LSKTVRGQYAKANVTPRRVLREFRVSNPES-YEVGQELTAEQFAVDSFVDVTGKTVGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR F G RA+HG HRS GS G Q PGRV+KNKKMAG MG TV+NL+V
Sbjct: 120 AGVMKRWGFRGGRASHGAHKVHRSGGSIGQCQTPGRVYKNKKMAGHMGQQTRTVQNLKVA 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + +I VKG +PG+ K S +LVRD+ K
Sbjct: 180 YVDAVQSIIAVKGSIPGS-KGSLVLVRDALKK 210
>gi|107024303|ref|YP_622630.1| 50S ribosomal protein L3 [Burkholderia cenocepacia AU 1054]
gi|116688372|ref|YP_833995.1| 50S ribosomal protein L3 [Burkholderia cenocepacia HI2424]
gi|123244306|sp|Q1BRU8|RL3_BURCA RecName: Full=50S ribosomal protein L3
gi|166233123|sp|A0K3M5|RL3_BURCH RecName: Full=50S ribosomal protein L3
gi|105894492|gb|ABF77657.1| LSU ribosomal protein L3P [Burkholderia cenocepacia AU 1054]
gi|116646461|gb|ABK07102.1| LSU ribosomal protein L3P [Burkholderia cenocepacia HI2424]
Length = 217
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 96/214 (44%), Positives = 130/214 (60%), Gaps = 2/214 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G +
Sbjct: 2 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 61
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP+ G + V + L EFR+ L G+V F VGQ VDV G++IGKG
Sbjct: 62 VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAVVGADLFEVGQKVDVQGVSIGKG 121
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KR+NF RATHG S SH GS G QDPGRVF K+M G MG VTV+NLE+
Sbjct: 122 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTVQNLEI 181
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+D +R L+LVKG +PGA K + V + K+
Sbjct: 182 ARIDAERKLLLVKGAIPGA-KGGKVFVTPAVKTK 214
>gi|283835737|ref|ZP_06355478.1| hypothetical protein CIT292_10129 [Citrobacter youngae ATCC 29220]
gi|291068416|gb|EFE06525.1| 50S ribosomal protein L3 [Citrobacter youngae ATCC 29220]
Length = 209
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 95/211 (45%), Positives = 131/211 (62%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY AVQV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR+ D + VG S F + VDVTG + GKGF+
Sbjct: 61 TKPEAGHFTKAGVEAGRGLWEFRL-ADGEEYTVGQSISVELFADVKKVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGA ++V+ + K+
Sbjct: 180 VDAERNLLLVKGGVPGA-TGCDLIVKPAVKA 209
>gi|160942901|ref|ZP_02090140.1| hypothetical protein FAEPRAM212_00377 [Faecalibacterium prausnitzii
M21/2]
gi|158445802|gb|EDP22805.1| hypothetical protein FAEPRAM212_00377 [Faecalibacterium prausnitzii
M21/2]
gi|295103925|emb|CBL01469.1| LSU ribosomal protein L3P [Faecalibacterium prausnitzii SL3/3]
Length = 210
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 91/212 (42%), Positives = 125/212 (58%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT +++ G+ IPVTV+ C VV +T++ +GY AVQ+G GE K
Sbjct: 1 MVKGIIGKKVGMTQLFDESGKVIPVTVIEAGPCTVVQKKTVESDGYQAVQLGFGEVSAKK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+K G F NV+PKK L EFR+ D + VG + F G VDV G++ GKG+
Sbjct: 61 VNKAAAGHFKKANVAPKKTLREFRLD-DVSAMNVGDILKADVFAAGDKVDVAGVSKGKGY 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR LR +HG R GS G +P RVF K++ G MG RVTV+NL VV
Sbjct: 120 QGVIKRFGQHRLRESHGTGPVARHAGSMGAISNPSRVFPGKRLPGHMGCVRVTVQNLTVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + LI VKG VPG+ K + I + +S K+
Sbjct: 180 KVDTENNLIAVKGAVPGS-KGTIITLANSVKA 210
>gi|114327218|ref|YP_744375.1| 50S ribosomal protein L3 [Granulibacter bethesdensis CGDNIH1]
gi|122327802|sp|Q0BUQ0|RL3_GRABC RecName: Full=50S ribosomal protein L3
gi|114315392|gb|ABI61452.1| LSU ribosomal protein L3P [Granulibacter bethesdensis CGDNIH1]
Length = 231
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 126/215 (58%), Positives = 160/215 (74%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+G++ARKLGMT ++ +G +PVTVLHLD QVV RT +++GY AVQ+G G+AK K+
Sbjct: 1 MRTGLIARKLGMTRLFKEDGTHVPVTVLHLDQVQVVDTRTKERDGYTAVQLGFGQAKPKH 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VSK +G F+ V V PKKKL EFRV +D +L G+ S +F VGQ VDVTG + GKGF
Sbjct: 61 VSKANKGHFARVKVEPKKKLVEFRV-AEDAILEPGATLSAEHFLVGQKVDVTGTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKR NF GL A+HGVSISHRSHGSTG RQDPG+ FKNKKMAG +G RVT +N+EV
Sbjct: 120 AGAMKRWNFAGLEASHGVSISHRSHGSTGNRQDPGKTFKNKKMAGHLGDERVTTQNVEVA 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
VD RGL++++G +PGA K ++LVRD+ K
Sbjct: 180 HVDAARGLLMIRGSIPGA-KGGYVLVRDAVKRKRP 213
>gi|222056705|ref|YP_002539067.1| ribosomal protein L3 [Geobacter sp. FRC-32]
gi|254803674|sp|B9M6U5|RL3_GEOSF RecName: Full=50S ribosomal protein L3
gi|221565994|gb|ACM21966.1| ribosomal protein L3 [Geobacter sp. FRC-32]
Length = 211
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 89/214 (41%), Positives = 123/214 (57%), Gaps = 3/214 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ +GRRIPVTV+ C V+ +T +K+GY A+QVG +
Sbjct: 1 MNKGLIGKKIGMTQIFADDGRRIPVTVVEAGPCVVIQKKTKEKDGYNAIQVGFDAKEAAK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+ G + E RV D VG V + F G ++DVTG +IGKGF
Sbjct: 61 ANSATVGHCKAAGSGAFSFFRELRVDNVDS-YNVGDVLNADLFAAGDVIDVTGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR F G R++HG S HR+ GS GC P RVFKNKKM G++G RVTV+ L+VV
Sbjct: 120 QGVIKRWGFKGGRSSHG-SRFHRAPGSIGCSATPSRVFKNKKMPGQLGNERVTVQRLKVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VD LILV G +PG+ N + ++DS K+
Sbjct: 179 RVDAADNLILVGGAIPGS-TNGLVFIKDSVKAKK 211
>gi|319407426|emb|CBI81077.1| 50S ribosomal protein L3 [Bartonella sp. 1-1C]
Length = 254
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 133/219 (60%), Positives = 162/219 (73%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+KLGMT +YN G +PVTVL LD CQV+ RT++KNGY AVQ+G G AK+KN
Sbjct: 9 MRSGVIAQKLGMTRIYNDAGEHVPVTVLRLDKCQVIAQRTVEKNGYTAVQLGVGFAKIKN 68
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SK +RG F+ V PK K+ EFRV D+LL VG+ + +F GQ VDVTG++IGKGF
Sbjct: 69 TSKALRGHFAKAVVEPKAKIAEFRVSP-DNLLDVGTEITVEHFVPGQRVDVTGVSIGKGF 127
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKRHNFGG RA+HG SI+HR+HGSTG QDPG+VFK KKMAG MG RVT +N+EVV
Sbjct: 128 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGRVRVTTQNIEVV 187
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
S D RGLILV+G V G+ K SWILVRD+ K +
Sbjct: 188 STDVDRGLILVRGSVSGS-KGSWILVRDAVKRRLPSNAP 225
>gi|262203624|ref|YP_003274832.1| 50S ribosomal protein L3 [Gordonia bronchialis DSM 43247]
gi|262086971|gb|ACY22939.1| 50S ribosomal protein L3 [Gordonia bronchialis DSM 43247]
Length = 219
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 128/215 (59%), Gaps = 2/215 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ KLGMT V++ R +PVTV+ + RT D++GY AVQ+ G + V
Sbjct: 7 TKGILGTKLGMTQVFDENNRVVPVTVIQAGPNVITQLRTADRDGYTAVQLAYGAIDPRKV 66
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+ G +S V+P++ L E RV D VG + F G LVDVTG + GKGF+
Sbjct: 67 TKPVAGQYSKAGVTPRRHLAEIRV-NDVSEFEVGQELTAEVFAEGSLVDVTGTSKGKGFA 125
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRH F GL A+HG HR+ GS G PGRVFK +MAGRMG ++VT +NL V
Sbjct: 126 GVMKRHGFSGLGASHGAHRVHRAPGSIGGCATPGRVFKGMRMAGRMGNDKVTTQNLTVHK 185
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
VD + GL+L+KG +PG +K ++VRD+ K
Sbjct: 186 VDAEAGLLLIKGAIPG-RKGGIVVVRDAVKGGAKA 219
>gi|330815249|ref|YP_004358954.1| 50S ribosomal protein L3 [Burkholderia gladioli BSR3]
gi|327367642|gb|AEA58998.1| 50S ribosomal protein L3 [Burkholderia gladioli BSR3]
Length = 216
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 96/214 (44%), Positives = 131/214 (61%), Gaps = 2/214 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G +
Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP+ G + V + L EFR+ L G++ P F VGQ VDV G++IGKG
Sbjct: 61 VTKPLAGHLAKAGVEAGEVLKEFRIDAAKAAELSNGAIVGPDLFEVGQKVDVQGVSIGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KR+NF RATHG S SH GS G QDPGRVF K+M G MG VTV+NLE+
Sbjct: 121 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTVQNLEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+D +R L+LVKG +PGA K + V + K+
Sbjct: 181 ARIDAERKLLLVKGAIPGA-KGGKVFVTPAVKTK 213
>gi|291562768|emb|CBL41584.1| 50S ribosomal protein L3, bacterial [butyrate-producing bacterium
SS3/4]
Length = 211
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 89/212 (41%), Positives = 124/212 (58%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++A K+GMT ++N EG +PVTVL C V +T + +GY AVQVG + + K
Sbjct: 1 MKKAILATKVGMTQIFNDEGVLVPVTVLQAGPCVVTQVKTEENDGYKAVQVGFVDKREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP++G F VS K+ + EFR + ++ V F G VD T ++ GKGF
Sbjct: 61 VNKPVKGHFDKAGVSYKRFVREFRFENSEE-YNVKDEIKADIFAAGDKVDATAISKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KR HG S HR GS G PGRVFK K M G+MG ++T +NLE+V
Sbjct: 120 QGAIKRLGQSRGPMAHG-SKFHRHQGSNGSATTPGRVFKGKGMPGQMGNKKITTQNLEIV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + LILVKG VPG KK S + ++++ K+
Sbjct: 179 KVDVENNLILVKGAVPGPKK-SLVTLKETVKA 209
>gi|148560391|ref|YP_001259153.1| 50S ribosomal protein L3 [Brucella ovis ATCC 25840]
gi|161619189|ref|YP_001593076.1| 50S ribosomal protein L3 [Brucella canis ATCC 23365]
gi|163843499|ref|YP_001627903.1| 50S ribosomal protein L3 [Brucella suis ATCC 23445]
gi|254701974|ref|ZP_05163802.1| 50S ribosomal protein L3 [Brucella suis bv. 5 str. 513]
gi|254704518|ref|ZP_05166346.1| 50S ribosomal protein L3 [Brucella suis bv. 3 str. 686]
gi|254706586|ref|ZP_05168414.1| 50S ribosomal protein L3 [Brucella pinnipedialis M163/99/10]
gi|254710304|ref|ZP_05172115.1| 50S ribosomal protein L3 [Brucella pinnipedialis B2/94]
gi|254719291|ref|ZP_05181102.1| 50S ribosomal protein L3 [Brucella sp. 83/13]
gi|256031798|ref|ZP_05445412.1| 50S ribosomal protein L3 [Brucella pinnipedialis M292/94/1]
gi|256061313|ref|ZP_05451463.1| 50S ribosomal protein L3 [Brucella neotomae 5K33]
gi|256369657|ref|YP_003107167.1| 50S ribosomal protein L3 [Brucella microti CCM 4915]
gi|260168932|ref|ZP_05755743.1| 50S ribosomal protein L3 [Brucella sp. F5/99]
gi|260566238|ref|ZP_05836708.1| ribosomal protein L3 [Brucella suis bv. 4 str. 40]
gi|261314046|ref|ZP_05953243.1| 50S ribosomal protein L3 [Brucella pinnipedialis M163/99/10]
gi|261317867|ref|ZP_05957064.1| 50S ribosomal protein L3 [Brucella pinnipedialis B2/94]
gi|261325320|ref|ZP_05964517.1| 50S ribosomal protein L3 [Brucella neotomae 5K33]
gi|261752542|ref|ZP_05996251.1| 50S ribosomal protein L3 [Brucella suis bv. 5 str. 513]
gi|261755201|ref|ZP_05998910.1| 50S ribosomal protein L3 [Brucella suis bv. 3 str. 686]
gi|261758425|ref|ZP_06002134.1| ribosomal protein L3 [Brucella sp. F5/99]
gi|265984291|ref|ZP_06097026.1| 50S ribosomal protein L3 [Brucella sp. 83/13]
gi|265988896|ref|ZP_06101453.1| 50S ribosomal protein L3 [Brucella pinnipedialis M292/94/1]
gi|294852570|ref|ZP_06793243.1| 50S ribosomal protein L3 [Brucella sp. NVSL 07-0026]
gi|306838043|ref|ZP_07470901.1| 50S ribosomal protein L3 [Brucella sp. NF 2653]
gi|306840301|ref|ZP_07473073.1| 50S ribosomal protein L3 [Brucella sp. BO2]
gi|306844137|ref|ZP_07476731.1| 50S ribosomal protein L3 [Brucella sp. BO1]
gi|166233122|sp|A5VR06|RL3_BRUO2 RecName: Full=50S ribosomal protein L3
gi|189042833|sp|A9M5Q0|RL3_BRUC2 RecName: Full=50S ribosomal protein L3
gi|189042834|sp|B0CH32|RL3_BRUSI RecName: Full=50S ribosomal protein L3
gi|148371648|gb|ABQ61627.1| ribosomal protein L3 [Brucella ovis ATCC 25840]
gi|161336000|gb|ABX62305.1| 50S ribosomal protein L3 [Brucella canis ATCC 23365]
gi|163674222|gb|ABY38333.1| 50S ribosomal protein L3 [Brucella suis ATCC 23445]
gi|255999819|gb|ACU48218.1| 50S ribosomal protein L3 [Brucella microti CCM 4915]
gi|260155756|gb|EEW90836.1| ribosomal protein L3 [Brucella suis bv. 4 str. 40]
gi|261297090|gb|EEY00587.1| 50S ribosomal protein L3 [Brucella pinnipedialis B2/94]
gi|261301300|gb|EEY04797.1| 50S ribosomal protein L3 [Brucella neotomae 5K33]
gi|261303072|gb|EEY06569.1| 50S ribosomal protein L3 [Brucella pinnipedialis M163/99/10]
gi|261738409|gb|EEY26405.1| ribosomal protein L3 [Brucella sp. F5/99]
gi|261742295|gb|EEY30221.1| 50S ribosomal protein L3 [Brucella suis bv. 5 str. 513]
gi|261744954|gb|EEY32880.1| 50S ribosomal protein L3 [Brucella suis bv. 3 str. 686]
gi|264661093|gb|EEZ31354.1| 50S ribosomal protein L3 [Brucella pinnipedialis M292/94/1]
gi|264662883|gb|EEZ33144.1| 50S ribosomal protein L3 [Brucella sp. 83/13]
gi|294821159|gb|EFG38158.1| 50S ribosomal protein L3 [Brucella sp. NVSL 07-0026]
gi|306275580|gb|EFM57312.1| 50S ribosomal protein L3 [Brucella sp. BO1]
gi|306289700|gb|EFM60889.1| 50S ribosomal protein L3 [Brucella sp. BO2]
gi|306406967|gb|EFM63188.1| 50S ribosomal protein L3 [Brucella sp. NF 2653]
Length = 237
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 138/219 (63%), Positives = 164/219 (74%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+KLGMT VYN G +PVTVL ++NC VV RT++KNGY AVQ+G G AKVKN
Sbjct: 1 MRSGVIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGMAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SK MRG F+ V PK KL EFRV D+LL VG + +F GQ VDVTG +IGKGF
Sbjct: 61 TSKAMRGHFAKAEVEPKAKLAEFRVSP-DNLLEVGVEITAEHFVAGQKVDVTGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKRHNFGG RA+HG SI+HRSHGSTG RQDPG+VFK KKMAG MG RVT +N+EVV
Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
S D RGLILV+G VPG+ K +WILVRD+ K+++
Sbjct: 180 STDSDRGLILVRGAVPGS-KGAWILVRDAVKASLPENAP 217
>gi|167626806|ref|YP_001677306.1| 50S ribosomal protein L3 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|241667387|ref|ZP_04754965.1| 50S ribosomal protein L3 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254875936|ref|ZP_05248646.1| 50S ribosomal protein L3 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|189042845|sp|B0U0Y9|RL3_FRAP2 RecName: Full=50S ribosomal protein L3
gi|167596807|gb|ABZ86805.1| 50S ribosomal protein L3 [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|254841957|gb|EET20371.1| 50S ribosomal protein L3 [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 210
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 99/212 (46%), Positives = 137/212 (64%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK GMT ++ +G IPVTV+ +++ +V +T + +GY A+QV G K N
Sbjct: 1 MSLGLVGRKCGMTRIFTEDGVSIPVTVVQVESNKVTQIKTTETDGYNAIQVTTGFKKRSN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KPM G ++ +V P + L+EF + D VG+ + F GQ VDV G++ GKGF
Sbjct: 61 VNKPMAGHYAKASVEPGRGLWEFAIDNASD-YEVGASIDATIFEAGQKVDVRGVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRHNF ATHG S+SHR HGSTG Q PGRVFKNKKMAG +G VT+++LEVV
Sbjct: 120 QGGVKRHNFATQDATHGNSLSHRVHGSTGQNQTPGRVFKNKKMAGHLGSENVTIQSLEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + GL+L+KG +PG+ ++V + KS
Sbjct: 180 RVDAENGLLLLKGGIPGSV-GGDVIVTPAVKS 210
>gi|77918315|ref|YP_356130.1| 50S ribosomal protein L3 [Pelobacter carbinolicus DSM 2380]
gi|109893533|sp|Q3A6P7|RL3_PELCD RecName: Full=50S ribosomal protein L3
gi|77544398|gb|ABA87960.1| LSU ribosomal protein L3P [Pelobacter carbinolicus DSM 2380]
Length = 210
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 91/211 (43%), Positives = 126/211 (59%), Gaps = 2/211 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGMT V+ ++G+ IPVTV+ C V+ +T +K+GY A+Q+G G K ++
Sbjct: 1 MTKGILGKKLGMTQVFAVDGKCIPVTVVEAGPCVVLQKKTEEKDGYNALQLGFGAKKTQS 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP G F + L E + DD + +F G ++DVTG + GKGF
Sbjct: 61 VNKPAMGHFKKSGKGAFEFLREVECENIDDHAVGDEITCDGFFATGDVIDVTGTSKGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR NF G RA+HG S+ HR G G P RVFK KKMAG+MG RVT + LEVV
Sbjct: 121 QGVIKRWNFAGGRASHG-SMFHRRPGGIGASAWPSRVFKGKKMAGQMGNKRVTTQGLEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
V ++ L+L+KG VPG N +L+R S K
Sbjct: 180 DVRPEKSLVLIKGAVPGPV-NGLLLIRKSRK 209
>gi|225027478|ref|ZP_03716670.1| hypothetical protein EUBHAL_01734 [Eubacterium hallii DSM 3353]
gi|224955213|gb|EEG36422.1| hypothetical protein EUBHAL_01734 [Eubacterium hallii DSM 3353]
Length = 209
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 88/212 (41%), Positives = 128/212 (60%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++A K+GMT ++ +G IPVTVL C+V +T++ +GY AVQVG + + K
Sbjct: 1 MKKAILATKIGMTQIFAEDGELIPVTVLQAGPCEVTQVKTVENDGYSAVQVGFQDMREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KPM+G F VS K+ + EF++ D + +G + F G VD T ++ GKGF
Sbjct: 61 STKPMKGHFEKAGVSVKRFVREFKLD-DAENYELGQKITVDVFEAGDKVDATAISKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH THG S HR GS G DP +V K KKM G+MG ++T++NLEVV
Sbjct: 120 QGAIKRHGQHTGPKTHG-SKYHRHAGSNGMASDPSKVMKGKKMPGQMGHVQITIQNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+D + +ILVKG VPG KK S + ++ + K+
Sbjct: 179 KIDAENNVILVKGSVPGPKK-SLVTLKAAVKA 209
>gi|313836021|gb|EFS73735.1| 50S ribosomal protein L3 [Propionibacterium acnes HL037PA2]
gi|314929560|gb|EFS93391.1| 50S ribosomal protein L3 [Propionibacterium acnes HL044PA1]
gi|314970555|gb|EFT14653.1| 50S ribosomal protein L3 [Propionibacterium acnes HL037PA3]
gi|328906230|gb|EGG26005.1| 50S ribosomal protein L3 [Propionibacterium sp. P08]
Length = 223
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 101/213 (47%), Positives = 132/213 (61%), Gaps = 2/213 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
GV+ KLGMT +++ + +PVTV+ C V RT + +GY AVQ+G G K KNV+
Sbjct: 8 KGVLGTKLGMTQLWDEHNKLVPVTVIQAGPCVVTQVRTPETDGYSAVQLGYGAVKAKNVT 67
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP G F V+P++ L E R D +G + F+ VDVTG + GKG +G
Sbjct: 68 KPEAGHFEKAGVTPRRHLVELR-TADASEYTLGQEITAGVFSESDFVDVTGTSKGKGTAG 126
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH FGGLRATHGV HRS GS G PG+V K +MAGRMG +RVTV+NL+V SV
Sbjct: 127 VMKRHGFGGLRATHGVHRKHRSPGSIGGCSTPGKVIKGLRMAGRMGTDRVTVQNLQVHSV 186
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D +RG++LV+G VPG K S ++VR + K A
Sbjct: 187 DAERGIMLVRGAVPGP-KGSLLVVRSAAKKAAK 218
>gi|167564417|ref|ZP_02357333.1| 50S ribosomal protein L3 [Burkholderia oklahomensis EO147]
gi|167571563|ref|ZP_02364437.1| 50S ribosomal protein L3 [Burkholderia oklahomensis C6786]
Length = 219
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 97/212 (45%), Positives = 130/212 (61%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G +
Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP+ G + V + L EFR+ L G++ P F VGQ VDV G++IGKG
Sbjct: 61 VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAIVGPDLFEVGQKVDVQGVSIGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KR+NFG RA+HG S SH GS G QDPGRVF K+M G MG VTV+NLE+
Sbjct: 121 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+D R L+LVKG VPGA K + V + K
Sbjct: 181 ARIDADRKLLLVKGAVPGA-KGGKVFVTPAVK 211
>gi|242052463|ref|XP_002455377.1| hypothetical protein SORBIDRAFT_03g009550 [Sorghum bicolor]
gi|241927352|gb|EES00497.1| hypothetical protein SORBIDRAFT_03g009550 [Sorghum bicolor]
Length = 318
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 103/212 (48%), Positives = 144/212 (67%), Gaps = 2/212 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+GV+ K GM+ +++ G ++P+TVL +D+ V +T +K G+ A+Q+GAG+ K K++
Sbjct: 71 RTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVTQVKTAEKEGFFALQLGAGQKKEKHL 130
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F + V K+KL EF V + D LLPVG+ + +F GQ VDVTG+T GKGF+
Sbjct: 131 TKPEVGHFRAQGVPLKRKLREFPVTE-DALLPVGTTITVRHFLPGQFVDVTGITKGKGFA 189
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MK+H F G A+HG S+SHRS GSTG R PGRVFKN+KM GRMGG + TVKN+ V
Sbjct: 190 GVMKKHGFSGGPASHGASLSHRSGGSTGQRDAPGRVFKNRKMPGRMGGVQRTVKNVWVYQ 249
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+D R L+ +KG VPG + S++ V+DS
Sbjct: 250 IDPARNLLYLKGQVPGPQ-GSFVFVKDSIYKK 280
>gi|237736170|ref|ZP_04566651.1| LSU ribosomal protein L3P [Fusobacterium mortiferum ATCC 9817]
gi|229421723|gb|EEO36770.1| LSU ribosomal protein L3P [Fusobacterium mortiferum ATCC 9817]
Length = 208
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 92/211 (43%), Positives = 134/211 (63%), Gaps = 3/211 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++A+K+GMT ++ +G+ IPVTV+ V+ +T++ +GY A+Q+G E K KN
Sbjct: 1 MSGILAKKIGMTQIF-EDGKFIPVTVVEAGPNFVLQKKTVENDGYTALQLGFDEKKEKNT 59
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+ G F V+P++ + E RV + +G + VD+TG + GKG S
Sbjct: 60 TKPVMGIFKKAGVNPQRFVKELRVDSVEG-YELGQEIKVDVLAGVEFVDITGTSKGKGTS 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRH FGG RA+HGVS +HR GS G PG+V K K+MAG+ G VTV+NL+VV
Sbjct: 119 GVMKRHGFGGNRASHGVSRNHRLGGSIGMSTWPGKVLKGKRMAGQYGNETVTVQNLKVVK 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + L+L+KG VPG+ KNS+I+V+ + K
Sbjct: 179 VDAENNLLLIKGAVPGS-KNSYIVVKPAVKK 208
>gi|330993846|ref|ZP_08317778.1| 50S ribosomal protein L3 [Gluconacetobacter sp. SXCC-1]
gi|329759114|gb|EGG75626.1| 50S ribosomal protein L3 [Gluconacetobacter sp. SXCC-1]
Length = 223
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 128/215 (59%), Positives = 162/215 (75%), Gaps = 2/215 (0%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++A+KLGMT ++ +G +PVTVL +D+ QVV RT +++GY AVQ+GAG+AKVKNVSKP
Sbjct: 1 MIAKKLGMTRLFKEDGTHVPVTVLQVDDLQVVDVRTTERDGYTAVQLGAGKAKVKNVSKP 60
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
RG F+ V PKKKL EFRV DD +L VG+ S ++F GQ VDVTG + GKGF+GAM
Sbjct: 61 NRGHFAKAKVEPKKKLAEFRV-ADDSVLEVGASLSAAHFVAGQKVDVTGTSKGKGFAGAM 119
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR NF GL ATHGVSISHRSHGSTG RQDPG+VFKNKKMAG +G RVT NLE+ +VD
Sbjct: 120 KRWNFAGLEATHGVSISHRSHGSTGNRQDPGKVFKNKKMAGHLGSERVTTLNLEIAAVDA 179
Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
++ LI+++G VPG KN +LVRD+ K A + +
Sbjct: 180 EKNLIMIRGSVPGG-KNETVLVRDAIKKARHAEAP 213
>gi|257453271|ref|ZP_05618570.1| 50S ribosomal protein L3P [Fusobacterium sp. 3_1_5R]
gi|257467134|ref|ZP_05631445.1| 50S ribosomal protein L3P [Fusobacterium gonidiaformans ATCC 25563]
gi|315918265|ref|ZP_07914505.1| LSU ribosomal protein L3P [Fusobacterium gonidiaformans ATCC 25563]
gi|317059805|ref|ZP_07924290.1| LSU ribosomal protein L3P [Fusobacterium sp. 3_1_5R]
gi|313685481|gb|EFS22316.1| LSU ribosomal protein L3P [Fusobacterium sp. 3_1_5R]
gi|313692140|gb|EFS28975.1| LSU ribosomal protein L3P [Fusobacterium gonidiaformans ATCC 25563]
Length = 208
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 89/211 (42%), Positives = 133/211 (63%), Gaps = 3/211 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++A+K+GMT ++ +G+ +PVTV+ V+ +T + +GY A+Q+G E K KN
Sbjct: 1 MSGILAKKIGMTQIF-EDGKFVPVTVVEAGPNYVLQKKTEESDGYTALQLGFDEKKEKNT 59
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+ G F+ V P++ + E +V + +G F+ + VD+TG + GKG +
Sbjct: 60 TKPLMGIFNKAGVKPQRFVRELKVDSVEG-YELGQEIKVDVFSEVEYVDITGTSKGKGTA 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRH FGG RATHGVS +HR GS G PG+V K +MAGR G VTV+NL+VV
Sbjct: 119 GVMKRHGFGGNRATHGVSRNHRLGGSIGQSSWPGKVLKGLRMAGRHGNATVTVQNLKVVK 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + L+L+KG VPGA KN +++++ + K
Sbjct: 179 VDAENNLLLIKGAVPGA-KNGYLVIKPAIKK 208
>gi|227821756|ref|YP_002825726.1| 50S ribosomal protein L3 [Sinorhizobium fredii NGR234]
gi|227340755|gb|ACP24973.1| 50S ribosomal protein L3 [Sinorhizobium fredii NGR234]
Length = 257
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 141/215 (65%), Positives = 171/215 (79%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT VYN G IPVTVL L+NCQVV RT +KNGY AVQ+GAG +KVKN
Sbjct: 30 MRSGVIAQKVGMTRVYNDAGEHIPVTVLRLENCQVVAQRTEEKNGYTAVQLGAGRSKVKN 89
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+K +RG F++ +V PK K+ EFRV D+L+ +G+ + S+F GQLVDVTG TIGKGF
Sbjct: 90 TTKALRGHFAAASVEPKAKVVEFRVTA-DNLIDIGAELTASHFVAGQLVDVTGTTIGKGF 148
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GA+KRHNFGGLRATHGVS+SHRSHGSTG QDPGRV+K K+MAG MG RVT +NLEVV
Sbjct: 149 AGAIKRHNFGGLRATHGVSVSHRSHGSTGSNQDPGRVWKGKRMAGHMGQTRVTTQNLEVV 208
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
S D+ RGLILVKG VPG+ K +WI+VRD+ KS
Sbjct: 209 STDEDRGLILVKGAVPGS-KGAWIVVRDAIKSGTP 242
>gi|291542035|emb|CBL15145.1| LSU ribosomal protein L3P [Ruminococcus bromii L2-63]
Length = 210
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 89/212 (41%), Positives = 129/212 (60%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++ +K+GMT +++ +G IPVTV+ C V +T++ +GY +VQ+G G+ K
Sbjct: 1 MQKAIIGKKIGMTQIFDEKGIMIPVTVVEAGPCVVTAKKTVENDGYASVQLGYGDVKPHK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KPM+GFF V+PKK L EFR D +G + FT G +DVTG + GKG
Sbjct: 61 VNKPMKGFFDKAGVAPKKTLKEFRFTDTDA-YSIGDLVKADVFTPGDKIDVTGKSKGKGT 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR NF L+ +HG R GS G P RV+K K+MAG +G +VTV+NL VV
Sbjct: 120 AGVIKRWNFHRLKESHGTGPCVRHGGSIGACSSPSRVWKGKRMAGHLGAEQVTVQNLTVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + LI VKG +PG K ++++DS K+
Sbjct: 180 KVDAENNLIAVKGAIPGPNKG-IVVIKDSVKA 210
>gi|168018029|ref|XP_001761549.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687233|gb|EDQ73617.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 258
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 101/208 (48%), Positives = 143/208 (68%), Gaps = 2/208 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+GV+A K GMT +++ G R+P+TVL +++ VV +T + +G+ A+Q+GAG+ K K +
Sbjct: 14 RTGVIAVKCGMTAIWDKWGARVPMTVLWVNDNHVVQVKTEETDGHFALQIGAGQRKPKQL 73
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F + V K+ L EF V + D LLP+G+ S +F GQ VD+ G+T GKGF
Sbjct: 74 TKPELGHFRAAGVPLKQHLAEFPVTE-DALLPLGTELSVRHFRPGQYVDIAGITTGKGFQ 132
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR F G+ A+HG S+SHRS GSTG RQDPG+VFK KKMAG MG R TVKN+ +
Sbjct: 133 GGMKRWGFAGMPASHGASLSHRSLGSTGGRQDPGKVFKGKKMAGHMGAVRRTVKNVWIYK 192
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209
++ +R LI V+G VPG K +++ +RD+
Sbjct: 193 IEPERDLIWVRGQVPG-HKGNFVYIRDA 219
>gi|54022700|ref|YP_116942.1| 50S ribosomal protein L3 [Nocardia farcinica IFM 10152]
gi|81823259|sp|Q5Z1W3|RL3_NOCFA RecName: Full=50S ribosomal protein L3
gi|54014208|dbj|BAD55578.1| putative ribosomal protein L3 [Nocardia farcinica IFM 10152]
Length = 221
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 90/213 (42%), Positives = 126/213 (59%), Gaps = 2/213 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ KLGMT V++ + R +PVTV+ V RT +++GY AVQV G + V+K
Sbjct: 11 GILGTKLGMTQVFDEKNRVVPVTVIKAGPNVVTQIRTEERDGYSAVQVAFGAIDPRKVNK 70
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P+ G F+ V+P++ + E RV D VG + F G VDVTG + GKG++G
Sbjct: 71 PVAGQFAKAGVTPRRHIAEIRV-ADASSFEVGQEINADVFEEGSYVDVTGTSKGKGYAGT 129
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
MKRH F G A+HG HR GS G PGRVFK +MAGRMG +RVT +NL V VD
Sbjct: 130 MKRHGFRGQGASHGAQAVHRRPGSIGGCATPGRVFKGMRMAGRMGNDRVTTQNLSVHKVD 189
Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
+ GL+L+KG +PG +K ++V+ + K +
Sbjct: 190 AENGLLLIKGAIPG-RKGGVVIVKSAVKGGAHA 221
>gi|34764925|ref|ZP_00145270.1| LSU ribosomal protein L3P [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|27885736|gb|EAA23133.1| LSU ribosomal protein L3P [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
Length = 211
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 91/213 (42%), Positives = 135/213 (63%), Gaps = 3/213 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT ++ +G+ +PVTV+ V+ +T +K+GY+A+Q+G E K KN
Sbjct: 1 MSGILGKKIGMTQIF-EDGKFVPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNT 59
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+ G F+ V P++ + E V+ D +G T + VD+TG + GKG S
Sbjct: 60 TKPLMGIFNKAGVKPQRFVKELAVESVDG-YELGQEIKVDVLTEVEYVDITGTSKGKGTS 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRH FGG RA+HGVS +HR GS G PG+V K K+MAG+ G VTV+NL+VV
Sbjct: 119 GVMKRHGFGGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKRMAGQHGNATVTVQNLKVVK 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VD + L+L+KG VPGA KN ++++R + K +
Sbjct: 179 VDAEHNLLLIKGAVPGA-KNGYLVIRPAVKKVI 210
>gi|167587772|ref|ZP_02380160.1| ribosomal protein L3 [Burkholderia ubonensis Bu]
gi|325529678|gb|EGD06541.1| 50S ribosomal protein L3 [Burkholderia sp. TJI49]
Length = 216
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 96/214 (44%), Positives = 132/214 (61%), Gaps = 2/214 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G +
Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP+ G + V + L EFR+ L G++ P F VGQ VDV G++IGKG
Sbjct: 61 VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAIVGPDLFEVGQKVDVQGVSIGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KR+NFG RA+HG S SH GS G QDPGRVF K+M G MG VTV+NLE+
Sbjct: 121 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTVQNLEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+D +R L+LVKG +PGA K + V + K+
Sbjct: 181 ARIDAERKLLLVKGAIPGA-KGGKVFVTPAVKTK 213
>gi|153952861|ref|YP_001393626.1| 50S ribosomal protein L3 [Clostridium kluyveri DSM 555]
gi|219853526|ref|YP_002470648.1| hypothetical protein CKR_0183 [Clostridium kluyveri NBRC 12016]
gi|189042838|sp|A5N4P7|RL3_CLOK5 RecName: Full=50S ribosomal protein L3
gi|254803666|sp|B9DYA9|RL3_CLOK1 RecName: Full=50S ribosomal protein L3
gi|146345742|gb|EDK32278.1| RplC [Clostridium kluyveri DSM 555]
gi|219567250|dbj|BAH05234.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 209
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 89/212 (41%), Positives = 130/212 (61%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++ +KLGMT ++N GR IPVTV+ C VV +T +K+GY ++Q+G G+ + K
Sbjct: 1 MKKAILGKKLGMTQIFNENGRVIPVTVIEAGPCVVVQKKTEEKDGYKSIQIGFGDIREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP++G F+ VS K+ L EF+V D+ VG F G +DV+G++ GKGF
Sbjct: 61 VNKPLKGHFAKSGVSLKRFLKEFKVDNIDE-YEVGQEIKADIFAEGDRIDVSGISKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G ++R N +HG S HR+ GS G DP R FKNKKM G MG TV NL+V
Sbjct: 120 QGVIRRWNAQRGPMSHG-SKFHRAVGSMGASSDPSRTFKNKKMPGHMGNKNTTVLNLQVA 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V ++ +IL+KG VPG K S++ ++D+ K+
Sbjct: 179 KVIPEKNIILIKGGVPGPNK-SFVSIKDTVKA 209
>gi|325678624|ref|ZP_08158234.1| 50S ribosomal protein L3 [Ruminococcus albus 8]
gi|324109674|gb|EGC03880.1| 50S ribosomal protein L3 [Ruminococcus albus 8]
Length = 212
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 91/213 (42%), Positives = 133/213 (62%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ G++ +K+GMT +++ G+ +PVTV+ C VV +T++ +GY AVQ+G GE + K
Sbjct: 1 MQKGIIGKKIGMTQIFDETGKVVPVTVVEAGPCVVVQKKTVENDGYEAVQLGYGEIRAKR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP++G F +V+ K+ L EF++ D + VG + FT G +VDV+G + G GF
Sbjct: 61 VNKPLQGHFKKADVAMKRTLKEFKL-ADAANMNVGDIVKAEVFTEGDVVDVSGTSKGHGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
SG +KRHN L+ THG HR GS G DP R++K KKM G+ G +VTV+NL VV
Sbjct: 120 SGTIKRHNGHRLKETHGTGPVHRHAGSYGACSDPSRIYKGKKMPGQYGNVKVTVQNLTVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD + LI +KG +PG KN + + DS K
Sbjct: 180 KVDAENNLIAIKGAIPGP-KNGTVTICDSVKKK 211
>gi|308376477|ref|ZP_07438983.2| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu008]
gi|308350981|gb|EFP39832.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu008]
Length = 221
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 91/213 (42%), Positives = 125/213 (58%), Gaps = 3/213 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ KLGMT V++ R +PVTV+ V RT +++GY AVQ+ GE + V
Sbjct: 7 RKGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKV 66
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+KP+ G +++ V+P++ L E R+ D VG + F G VDVTG + GKG
Sbjct: 67 NKPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKG 126
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G MKRH F G A+HG HR GS G P RVFK +MAGRMG +RVTV NL V
Sbjct: 127 FAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLV 186
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + G++L+KG VPG + ++VR + K
Sbjct: 187 HKVDAENGVLLIKGAVPG-RTGGLVMVRSAIKR 218
>gi|52078609|ref|YP_077400.1| 50S ribosomal protein L3 [Bacillus licheniformis ATCC 14580]
gi|52783971|ref|YP_089800.1| 50S ribosomal protein L3 [Bacillus licheniformis ATCC 14580]
gi|319649116|ref|ZP_08003324.1| 50S ribosomal protein L3 [Bacillus sp. BT1B_CT2]
gi|81825438|sp|Q65PA7|RL3_BACLD RecName: Full=50S ribosomal protein L3
gi|52001820|gb|AAU21762.1| ribosomal protein L3 (BL3) [Bacillus licheniformis ATCC 14580]
gi|52346473|gb|AAU39107.1| RplC [Bacillus licheniformis ATCC 14580]
gi|317388816|gb|EFV69635.1| 50S ribosomal protein L3 [Bacillus sp. BT1B_CT2]
Length = 209
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 92/213 (43%), Positives = 127/213 (59%), Gaps = 4/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+Q+G + + K
Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEAAPNVVLQKKTSENDGYEAIQIGFDDKREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + +PK+ + E R D VG F+ G++VDVTG + GKGF
Sbjct: 61 ANKPEKGHVAKAETAPKRFVKELRGVDMDA-YEVGQEVKVDIFSNGEIVDVTGTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH +HG S HR GS G DP RVFK K + GRMGG ++TV+NLE+V
Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGPV-DPNRVFKGKLLPGRMGGEQITVQNLEIV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD +R L+LVKG VPGAKK S + V+ + KS
Sbjct: 178 KVDAERNLLLVKGNVPGAKK-SLVTVKSAVKSK 209
>gi|319783320|ref|YP_004142796.1| 50S ribosomal protein L3 [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317169208|gb|ADV12746.1| 50S ribosomal protein L3 [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 242
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 130/219 (59%), Positives = 163/219 (74%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT +YN G +PVTVL ++NCQVV RT +KNGY AVQ+G G AKVKN
Sbjct: 1 MRSGVIAKKVGMTRIYNDAGEHVPVTVLLMENCQVVAQRTQEKNGYTAVQLGVGLAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SK MRG F++ +V PK K+ EFRV D+++ VG+ + +F GQ VDVTG TIGKGF
Sbjct: 61 TSKAMRGHFATASVEPKAKVAEFRVSA-DNMIDVGAEITVEHFVAGQKVDVTGTTIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH+ GG RATHG S+SHR+HGSTG RQDPG+VFK K MAG MG RVT +N+E+V
Sbjct: 120 QGVIKRHHMGGGRATHGNSVSHRTHGSTGQRQDPGKVFKGKHMAGHMGDTRVTTQNVEIV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
S D RGLIL++G VPG+ K +WILVRD+ K A+
Sbjct: 180 STDADRGLILIRGAVPGS-KGAWILVRDAAKVALPANAP 217
>gi|255536154|ref|YP_003096525.1| LSU ribosomal protein L3p (L3e) [Flavobacteriaceae bacterium
3519-10]
gi|255342350|gb|ACU08463.1| LSU ribosomal protein L3p (L3e) [Flavobacteriaceae bacterium
3519-10]
Length = 208
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 95/208 (45%), Positives = 135/208 (64%), Gaps = 3/208 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT +++ G+ +P TV+ C V+ RT++K+GY A Q+G + KNV
Sbjct: 1 MSGIIGKKIGMTSLFDENGKNMPCTVIQAGPCSVLQVRTIEKDGYKAAQLGFDDKSEKNV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
K + G F +PK KL EF + D L VG F+ G+ VDVTG + GKGF
Sbjct: 61 GKALIGHFKKAGSAPKAKLVEFY-HEFVDKLSVGDEVKVDLFSQGEFVDVTGTSKGKGFQ 119
Query: 122 GAMKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRHNF G ++ATHG R+ GS G DP RVFK +MAGRMGG +VTV+NL+V+
Sbjct: 120 GVVKRHNFGGVMQATHGQHNRLRAPGSIGAGSDPSRVFKGMRMAGRMGGKQVTVQNLQVL 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
VD+++ L++VKG VPGA KNS++++R
Sbjct: 180 RVDEEQNLLVVKGAVPGA-KNSYVIIRK 206
>gi|317065030|ref|ZP_07929515.1| LSU ribosomal protein L3P [Fusobacterium ulcerans ATCC 49185]
gi|313690706|gb|EFS27541.1| LSU ribosomal protein L3P [Fusobacterium ulcerans ATCC 49185]
Length = 213
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 91/211 (43%), Positives = 134/211 (63%), Gaps = 3/211 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++A+K+GMT ++ +G+ IPVTV+ V+ +T++ +GY A+Q+G E K KN
Sbjct: 6 MSGILAKKIGMTQIF-EDGKFIPVTVVEAGPNYVLQKKTVENDGYTALQLGFDEKKEKNT 64
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+ G F V+P++ + E RV + +G + VD+TG + GKG +
Sbjct: 65 TKPIMGIFKKAGVNPQRFVKELRVDSVEG-FELGQEIKADVLAEVEYVDITGTSKGKGTA 123
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRHNF G RA+HGVS +HR GS G PG+V + KKMAG+ G VTV+NL+VV
Sbjct: 124 GVMKRHNFAGNRASHGVSRNHRLGGSIGMSSWPGKVLRGKKMAGQYGNATVTVQNLKVVK 183
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + L+L+KG VPG+ KNS+I+V+ + K
Sbjct: 184 VDVENNLLLIKGAVPGS-KNSYIVVKPAVKK 213
>gi|212288599|sp|A2SLF7|RL3_METPP RecName: Full=50S ribosomal protein L3
Length = 226
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 94/221 (42%), Positives = 127/221 (57%), Gaps = 4/221 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ RK+GM ++ +G +PVTVL + N +V +T++ +GY A+QV G K V
Sbjct: 9 RLGLLGRKVGMMRIFTDDGDAVPVTVLDVSNNRVTQVKTVETDGYSAIQVTFGARKASRV 68
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP G + V + L EF V + G F GQ VDV G +IGKGF
Sbjct: 69 TKPEAGHLAKAGVEAGEILREFAVSAEVAAEYKPGGTLPVGLFAAGQKVDVQGTSIGKGF 128
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KRHNFG RA+HG S SH GS QDPGRVF KKM+G G T +NL++V
Sbjct: 129 TGTIKRHNFGSQRASHGNSRSHNVPGSISMAQDPGRVFPGKKMSGHRGDVTKTTQNLDIV 188
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
VD+ R L+LV+G VPGA KN ++ VR + K V K +
Sbjct: 189 RVDEARQLLLVRGAVPGA-KNGFVTVRPAVK--VKAKKGAN 226
>gi|313667441|ref|YP_004047725.1| 50S ribosomal protein L3 [Neisseria lactamica ST-640]
gi|313004903|emb|CBN86329.1| 50S ribosomal protein L3 [Neisseria lactamica 020-06]
Length = 214
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 104/212 (49%), Positives = 134/212 (63%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K
Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDD-LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+K G F+ V + L EF + ++ L G + S F VGQLVDVTG + GKG
Sbjct: 61 VNKAEAGHFAKAGVEAGRGLIEFALTEEKPVELKAGDEITVSMFEVGQLVDVTGTSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEV
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
V VD +R L+LVKG VPGA NS ++VR S K
Sbjct: 181 VRVDAERQLLLVKGAVPGAV-NSDVVVRPSVK 211
>gi|257463961|ref|ZP_05628346.1| 50S ribosomal protein L3P [Fusobacterium sp. D12]
gi|317061484|ref|ZP_07925969.1| LSU ribosomal protein L3P [Fusobacterium sp. D12]
gi|313687160|gb|EFS23995.1| LSU ribosomal protein L3P [Fusobacterium sp. D12]
Length = 208
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 90/211 (42%), Positives = 132/211 (62%), Gaps = 3/211 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++A+K+GMT ++ +G+ +PVTV+ V+ +T + +GY A+Q+G E K KN
Sbjct: 1 MSGILAKKIGMTQIF-EDGKFVPVTVVEAGPNYVLQKKTEETDGYTALQLGFDEKKEKNT 59
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+ G F+ V P++ + E +V + +G F+ + VD+TG + GKG S
Sbjct: 60 TKPLMGIFNKAGVKPQRFVRELKVDSVEG-YELGQEIKVDVFSEVEYVDITGTSKGKGTS 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRH FGG RATHGVS +HR GS G PG+V K +MAGR G VTV+NL+VV
Sbjct: 119 GVMKRHGFGGNRATHGVSRNHRLGGSIGQSSWPGKVLKGLRMAGRHGNATVTVQNLKVVR 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD L+L+KG VPGA KN +++++ + K
Sbjct: 179 VDADNNLLLIKGAVPGA-KNGYLVIKPAIKK 208
>gi|50955566|ref|YP_062854.1| 50S ribosomal protein L3 [Leifsonia xyli subsp. xyli str. CTCB07]
gi|81826588|sp|Q6ACZ5|RL3_LEIXX RecName: Full=50S ribosomal protein L3
gi|50952048|gb|AAT89749.1| 50S ribosomal protein L3 [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 219
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 92/210 (43%), Positives = 126/210 (60%), Gaps = 1/210 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +KLGMT V++ IPVTV+ + V RT + +GY AVQ+ G+ + V+K
Sbjct: 11 GLLGKKLGMTQVWDENDTLIPVTVIEITPNVVTQVRTPEADGYNAVQIAYGQIDRRKVNK 70
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P G F V+P++ L E R + + F GQLVDV G + KGF+G
Sbjct: 71 PSAGHFDKAGVTPRRHLTEVRTADAAEYSAGQELTVDGTFEAGQLVDVVGTSKSKGFAGV 130
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
MKRHNF G+ A+HG +HR GS G P RVFK +MAGRMGG RVTV NL+V ++D
Sbjct: 131 MKRHNFQGVSASHGAHRNHRKPGSIGASSTPSRVFKGMRMAGRMGGERVTVLNLKVQAID 190
Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
++GL+LVKG VPGA + + VR++ K A
Sbjct: 191 AEKGLLLVKGAVPGA-RGRIVFVRNAVKGA 219
>gi|68536923|ref|YP_251628.1| 50S ribosomal protein L3 [Corynebacterium jeikeium K411]
gi|109893423|sp|Q4JT47|RL3_CORJK RecName: Full=50S ribosomal protein L3
gi|68264522|emb|CAI38010.1| 50S ribosomal protein L3 [Corynebacterium jeikeium K411]
Length = 218
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 89/214 (41%), Positives = 125/214 (58%), Gaps = 2/214 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ +KLGMT +++ E R +PVTV+ C V R+ + +GY AVQ+ GE + V+
Sbjct: 7 KGILGKKLGMTQIFDEENRVVPVTVVEAGPCVVTQVRSKETDGYEAVQIAFGEIDPRKVN 66
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP G F V+P++ + E RV D VG + F + VDVTG T GKG++G
Sbjct: 67 KPAAGHFKKAGVTPRRHVAEIRV-ADASSYEVGQDVTVDIFNDVKFVDVTGTTKGKGYAG 125
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F G A HG +HR GS G PGRVFK K+MAGRMG +RVT +NL++ V
Sbjct: 126 GMKRHGFAGQGAAHGNQAAHRRVGSIGQAATPGRVFKGKRMAGRMGNDRVTQQNLKLAKV 185
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
D + L+L+KG VPG ++V+ + K +
Sbjct: 186 DAESNLLLIKGAVPG-VNGGLVVVKTAVKGGAHA 218
>gi|254246597|ref|ZP_04939918.1| Ribosomal protein L3 [Burkholderia cenocepacia PC184]
gi|124871373|gb|EAY63089.1| Ribosomal protein L3 [Burkholderia cenocepacia PC184]
Length = 220
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 96/214 (44%), Positives = 130/214 (60%), Gaps = 2/214 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G +
Sbjct: 5 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 64
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP+ G + V + L EFR+ L G+V F VGQ VDV G++IGKG
Sbjct: 65 VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAVVGADLFEVGQKVDVQGVSIGKG 124
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KR+NF RATHG S SH GS G QDPGRVF K+M G MG VTV+NLE+
Sbjct: 125 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTVQNLEI 184
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+D +R L+LVKG +PGA K + V + K+
Sbjct: 185 ARIDAERKLLLVKGAIPGA-KGGKVFVTPAVKTK 217
>gi|15889242|ref|NP_354923.1| 50S ribosomal protein L3 [Agrobacterium tumefaciens str. C58]
gi|42559664|sp|Q8UE18|RL3_AGRT5 RecName: Full=50S ribosomal protein L3
gi|15157069|gb|AAK87708.1| 50S ribosomal protein L3 [Agrobacterium tumefaciens str. C58]
Length = 213
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 141/215 (65%), Positives = 170/215 (79%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT VYN G IPVTVL LDN QVV RT DKNGY AVQ+GAG++KVKN
Sbjct: 1 MRSGVIAQKVGMTRVYNDAGEHIPVTVLRLDNVQVVAQRTEDKNGYTAVQLGAGQSKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+K +RG F++ NV PK KL EFRV ++L+ +G+ + ++F GQLVDVTG TIGKGF
Sbjct: 61 TTKALRGHFAAANVEPKAKLVEFRVSP-ENLIDIGATLTANHFQSGQLVDVTGTTIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRHNFGG RA+HG S+SHR+HGSTG QDPGRV+K K+MAG MG RVT +NLEVV
Sbjct: 120 AGAMKRHNFGGGRASHGNSVSHRAHGSTGNNQDPGRVWKGKRMAGHMGQTRVTTQNLEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
S D+ RGLILVKG VPG+ K SWI+VRD+ KSA
Sbjct: 180 STDEDRGLILVKGAVPGS-KGSWIIVRDAVKSAAK 213
>gi|23502110|ref|NP_698237.1| 50S ribosomal protein L3 [Brucella suis 1330]
gi|42559647|sp|Q8G076|RL3_BRUSU RecName: Full=50S ribosomal protein L3
gi|23348070|gb|AAN30152.1| ribosomal protein L3 [Brucella suis 1330]
Length = 237
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 138/219 (63%), Positives = 164/219 (74%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+KLGMT VYN G +PVTVL ++NC VV RT++KNGY AVQ+G G AKVKN
Sbjct: 1 MRSGVIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGVAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SK MRG F+ V PK KL EFRV D+LL VG + +F GQ VDVTG +IGKGF
Sbjct: 61 TSKAMRGHFAKAEVEPKAKLAEFRVSP-DNLLEVGVEITAEHFVAGQKVDVTGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKRHNFGG RA+HG SI+HRSHGSTG RQDPG+VFK KKMAG MG RVT +N+EVV
Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
S D RGLILV+G VPG+ K +WILVRD+ K+++
Sbjct: 180 STDSDRGLILVRGAVPGS-KGAWILVRDAVKASLPENAP 217
>gi|331699176|ref|YP_004335415.1| 50S ribosomal protein L3 [Pseudonocardia dioxanivorans CB1190]
gi|326953865|gb|AEA27562.1| 50S ribosomal protein L3 [Pseudonocardia dioxanivorans CB1190]
Length = 217
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 89/213 (41%), Positives = 126/213 (59%), Gaps = 2/213 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
+G++ +KLGMT V++ R +PVTV+ V R+ + +GY+AVQ+ G + V+
Sbjct: 7 TGILGKKLGMTQVFDENNRVVPVTVVQAGPNVVTQIRSQETDGYVAVQLAFGAVDPRRVN 66
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP G F+ V+P++ E R D +G + F G +VDV G + GKG++G
Sbjct: 67 KPETGHFAKAGVTPRRYTVELRTT-DAGEYSLGQEITAEVFEPGAVVDVVGTSKGKGYAG 125
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRHNF GL A+HG HRS GS G PGRVFK +MAGRMG RVT +NL V V
Sbjct: 126 VMKRHNFKGLGASHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGSVRVTTQNLTVHRV 185
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D +RGL+L+KG VPG + + ++V+ + K
Sbjct: 186 DAERGLLLIKGAVPGP-RGALVVVKTAAKGGAK 217
>gi|255319815|ref|ZP_05361020.1| 50S ribosomal protein L3 [Acinetobacter radioresistens SK82]
gi|262380348|ref|ZP_06073502.1| 50S ribosomal protein L3 [Acinetobacter radioresistens SH164]
gi|255303134|gb|EET82346.1| 50S ribosomal protein L3 [Acinetobacter radioresistens SK82]
gi|262297794|gb|EEY85709.1| 50S ribosomal protein L3 [Acinetobacter radioresistens SH164]
Length = 212
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 95/213 (44%), Positives = 135/213 (63%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK GMT ++ G +PVTV+ +D ++ +TL+ +GY A+QV GE +
Sbjct: 1 MAIGLVGRKCGMTRIFTEAGVSVPVTVIEVDPNRITQIKTLETDGYQAIQVTTGERRESR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+ +G F+ V+ + + EFRV + + + VG+ F VGQ+VDVTG + GKG
Sbjct: 61 VTNGQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGASIGVDLFAVGQIVDVTGQSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KR NF ATHG S+SHR GSTG Q PGRVFK KKMAG +G RVTV+ LE+
Sbjct: 121 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VS+D +R +++VKG +PGA ++VR + K+
Sbjct: 181 VSIDAERSVLVVKGAIPGA-TGGDVIVRPTIKA 212
>gi|227502654|ref|ZP_03932703.1| 50S ribosomal protein L3 [Corynebacterium accolens ATCC 49725]
gi|306835219|ref|ZP_07468253.1| 50S ribosomal protein L3 [Corynebacterium accolens ATCC 49726]
gi|227076384|gb|EEI14347.1| 50S ribosomal protein L3 [Corynebacterium accolens ATCC 49725]
gi|304568899|gb|EFM44430.1| 50S ribosomal protein L3 [Corynebacterium accolens ATCC 49726]
Length = 218
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 87/214 (40%), Positives = 122/214 (57%), Gaps = 2/214 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ +KLGMT V++ E R +PVTV+ C V RT + +GY A+Q+ GE + +
Sbjct: 7 KGILGKKLGMTQVFDDENRVVPVTVVEAGPCVVTQIRTPETDGYSAIQIAFGEIDPRKAN 66
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP G F V+P++ + E R+ D VG F VDVTG T G G++G
Sbjct: 67 KPESGHFKKAGVTPRRHVAEIRMD-DTSAYEVGQEVKVDIFEGITFVDVTGQTKGHGYAG 125
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
AMKRH F G A HG +HR G G PGRVFK K+MAGRMG +RVT +NL++ V
Sbjct: 126 AMKRHGFQGQGAAHGNQAAHRRVGGIGGAATPGRVFKGKRMAGRMGHDRVTTQNLKIQKV 185
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
D + L+L+KG +PGA + + V+ + K +
Sbjct: 186 DVESNLLLIKGAIPGA-RGGLVTVKTAVKGGAHA 218
>gi|167838212|ref|ZP_02465071.1| 50S ribosomal protein L3 [Burkholderia thailandensis MSMB43]
Length = 219
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 99/212 (46%), Positives = 131/212 (61%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G +
Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP+ G + V + L EFR+ D L G+V P F VGQ VDV G++IGKG
Sbjct: 61 VTKPLAGHLAKAGVQAGEILKEFRIAADKAAELSNGAVIGPDLFEVGQKVDVQGVSIGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KR+NFG RA+HG S SH GS G QDPGRVF K+M G MG VTV+NLE+
Sbjct: 121 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+D R L+LVKG VPGA K + V + K
Sbjct: 181 ARIDADRKLLLVKGAVPGA-KGGKVFVTPAVK 211
>gi|319408765|emb|CBI82422.1| 50S ribosomal protein L3 [Bartonella schoenbuchensis R1]
Length = 246
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 133/215 (61%), Positives = 163/215 (75%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+KLGMT +YN G +PVTVL L+NCQV+ RT++KNGY AVQ+G G AKVKN
Sbjct: 1 MRSGVIAQKLGMTRIYNEAGEHVPVTVLRLENCQVIAQRTVEKNGYTAVQLGVGFAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VS+ +RG F+ V PK K+ EFRV D+LL VG+ + +F GQ VDVTG +IGKGF
Sbjct: 61 VSRALRGHFAKAVVEPKAKVAEFRVSP-DNLLDVGTEITVEHFIPGQRVDVTGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKRHNFGG RA+HG SI+HR+HGSTG QDPG+VFK KKMAG MG RVT +N+EVV
Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGQVRVTTQNIEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
S D RGLILV+G V G+ K +WILVRD+ K +
Sbjct: 180 STDIDRGLILVRGAVSGS-KGAWILVRDAVKKRLP 213
>gi|295101414|emb|CBK98959.1| LSU ribosomal protein L3P [Faecalibacterium prausnitzii L2-6]
Length = 210
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 91/212 (42%), Positives = 126/212 (59%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT +++ G+ IPVTV+ C VV +T++ +GY AVQ+G GE K
Sbjct: 1 MVKGIIGKKVGMTQLFDESGKVIPVTVIEAGPCTVVQKKTVESDGYQAVQLGFGEVSAKK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+K G F NV+PKK L EFR+ +D + VG V F G VDV G++ GKG+
Sbjct: 61 VNKAAAGHFKKANVAPKKTLREFRL-EDVSAMNVGDVLKADVFAAGDKVDVVGVSKGKGY 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR+ LR +HG R GS G P RVF K++ G MG RVTV+NL VV
Sbjct: 120 QGVIKRYGQHRLRESHGTGPVARHAGSNGSTSTPSRVFPGKRLPGHMGFVRVTVQNLTVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + LI VKG VPG+ K + + + +S K+
Sbjct: 180 KVDTENNLIAVKGAVPGS-KGTIVTLANSVKA 210
>gi|138893785|ref|YP_001124238.1| 50S ribosomal protein L3 [Geobacillus thermodenitrificans NG80-2]
gi|196251024|ref|ZP_03149706.1| ribosomal protein L3 [Geobacillus sp. G11MC16]
gi|166233146|sp|A4IJI9|RL3_GEOTN RecName: Full=50S ribosomal protein L3
gi|134265298|gb|ABO65493.1| Ribosomal protein L3 [Geobacillus thermodenitrificans NG80-2]
gi|196209496|gb|EDY04273.1| ribosomal protein L3 [Geobacillus sp. G11MC16]
Length = 211
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 85/215 (39%), Positives = 123/215 (57%), Gaps = 4/215 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY A+Q+G + K
Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEATPNVVLQKKTIENDGYEAIQLGFEDLSTKR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP G + N +PK+ + E R + VG F+ G +VDVTG++ GKGF
Sbjct: 61 ANKPQIGHAAKANTAPKRFIREIRGANV-NEYEVGQEVKVDIFSEGDIVDVTGISKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFK K + GRMGG RVT++NL++V
Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGAIA-PNRVFKTKNLPGRMGGERVTIQNLKIV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
VD +R L+L+KG VPG +K ++V+ + K+
Sbjct: 178 KVDPERNLLLIKGNVPGPRKG-LVIVKSAVKAKAK 211
>gi|261400052|ref|ZP_05986177.1| 50S ribosomal protein L3 [Neisseria lactamica ATCC 23970]
gi|269210278|gb|EEZ76733.1| 50S ribosomal protein L3 [Neisseria lactamica ATCC 23970]
Length = 214
Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 105/212 (49%), Positives = 134/212 (63%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K
Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+K G F+ V + L EF + ++ L G + S F VGQLVDVTG + GKG
Sbjct: 61 VNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEV
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGNTKATVQKLEV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
V VD +R L+LVKG VPGA NS I+VR S K
Sbjct: 181 VRVDAERQLLLVKGAVPGAV-NSNIVVRPSVK 211
>gi|220921899|ref|YP_002497200.1| 50S ribosomal protein L3 [Methylobacterium nodulans ORS 2060]
gi|254803681|sp|B8IS85|RL3_METNO RecName: Full=50S ribosomal protein L3
gi|219946505|gb|ACL56897.1| ribosomal protein L3 [Methylobacterium nodulans ORS 2060]
Length = 251
Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 133/220 (60%), Positives = 163/220 (74%), Gaps = 2/220 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT V+ G +PVTVL +D CQVV HRT++KNGY+A+QVG G+AKVKN
Sbjct: 1 MRSGVIAQKVGMTRVFTDAGEHVPVTVLKVDQCQVVAHRTVEKNGYVALQVGVGKAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VSK RG F+ V PK+KL EFRV + D L+PVG+ + +F GQ VDVTG+T GKGF
Sbjct: 61 VSKAERGRFAIAKVEPKRKLAEFRVSE-DALIPVGAEITADHFIPGQFVDVTGITTGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR NFGGLRA+HGVSISHRS GSTG RQDPG+ FKNKKM G +G RVT +NL VV
Sbjct: 120 AGGMKRWNFGGLRASHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHLGVERVTTQNLRVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
D +RGLILV+G VPG WI VRD+ K + + +
Sbjct: 180 RTDPERGLILVEGAVPGVA-GGWIHVRDAVKRKLPAEAPM 218
>gi|94676516|ref|YP_588776.1| ribosomal protein L3 [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|123260557|sp|Q1LTD8|RL3_BAUCH RecName: Full=50S ribosomal protein L3
gi|94219666|gb|ABF13825.1| ribosomal protein L3 [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 212
Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 84/210 (40%), Positives = 131/210 (62%), Gaps = 1/210 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT ++ EG IP+T++ ++ + +++ +GY A QV G K V
Sbjct: 1 MKGLIGRKIGMTRIFTDEGISIPITIIQVEPNIITQVKSIQTDGYYAYQVTTGTKKPNLV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
KP G F+ + L+EFR++ ++ + +G + + YFT + VD+TG + GKGFS
Sbjct: 61 IKPEAGHFAKAGTKAGRSLWEFRLKHEEKPINIGEILTLEYFTNIKKVDITGTSKGKGFS 120
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF A+HG S+SHR GS G Q PG+VFK KKMAG MG RVT++NL+++
Sbjct: 121 GTVKRWNFHMQDASHGNSLSHRVTGSIGQNQTPGKVFKGKKMAGHMGNKRVTIQNLDIIR 180
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+D ++ L+L+KG +PGA N I ++ + K
Sbjct: 181 IDLRKNLLLIKGAIPGAPGNDLI-IKPAIK 209
>gi|148263140|ref|YP_001229846.1| 50S ribosomal protein L3 [Geobacter uraniireducens Rf4]
gi|189042846|sp|A5GAW5|RL3_GEOUR RecName: Full=50S ribosomal protein L3
gi|146396640|gb|ABQ25273.1| LSU ribosomal protein L3P [Geobacter uraniireducens Rf4]
Length = 211
Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 94/214 (43%), Positives = 126/214 (58%), Gaps = 3/214 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGMT ++ +GRRIPVTV+ C V+ +T +K+GY A+QVG +
Sbjct: 1 MNKGLIGKKLGMTQIFAEDGRRIPVTVVEAGPCVVIQKKTKEKDGYSAIQVGFNSQEAAK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+ + G + L E RV D VG V S F G LVDVTG +IGKGF
Sbjct: 61 ANSAVVGHCKTAGSGVFSFLRELRVDNAD-QYSVGDVLSAEIFAPGDLVDVTGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G MKR F G RA+HG S HR+ GS GC P RVFKNKKM G++G +VTV+ L++V
Sbjct: 120 QGVMKRWGFKGGRASHG-SRFHRAPGSIGCSATPSRVFKNKKMPGQLGNEKVTVQRLKIV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VD LIL+ G +PG+ N +L++DS K+
Sbjct: 179 RVDAADNLILLNGAIPGS-TNGLVLIKDSVKAKK 211
>gi|15607841|ref|NP_215215.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis H37Rv]
gi|15840108|ref|NP_335145.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis CDC1551]
gi|31791886|ref|NP_854379.1| 50S ribosomal protein L3 [Mycobacterium bovis AF2122/97]
gi|121636623|ref|YP_976846.1| 50S ribosomal protein L3 [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148660476|ref|YP_001281999.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis H37Ra]
gi|148821906|ref|YP_001286660.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis F11]
gi|167967943|ref|ZP_02550220.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis H37Ra]
gi|215402485|ref|ZP_03414666.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis 02_1987]
gi|215410256|ref|ZP_03419064.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis 94_M4241A]
gi|215425943|ref|ZP_03423862.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis T92]
gi|215429541|ref|ZP_03427460.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis EAS054]
gi|215444824|ref|ZP_03431576.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis T85]
gi|218752351|ref|ZP_03531147.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis GM 1503]
gi|219556550|ref|ZP_03535626.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis T17]
gi|224989095|ref|YP_002643782.1| 50S ribosomal protein L3 [Mycobacterium bovis BCG str. Tokyo 172]
gi|253797644|ref|YP_003030645.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis KZN 1435]
gi|254231021|ref|ZP_04924348.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis C]
gi|254363648|ref|ZP_04979694.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis str.
Haarlem]
gi|254549662|ref|ZP_05140109.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260185583|ref|ZP_05763057.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis CPHL_A]
gi|260199711|ref|ZP_05767202.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis T46]
gi|260203872|ref|ZP_05771363.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis K85]
gi|289442102|ref|ZP_06431846.1| LSU ribosomal protein L3 [Mycobacterium tuberculosis T46]
gi|289446261|ref|ZP_06436005.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis CPHL_A]
gi|289552958|ref|ZP_06442168.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis KZN 605]
gi|289568645|ref|ZP_06448872.1| ribosomal protein L3 [Mycobacterium tuberculosis T17]
gi|289573309|ref|ZP_06453536.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis K85]
gi|289744425|ref|ZP_06503803.1| ribosomal protein L3 [Mycobacterium tuberculosis 02_1987]
gi|289749208|ref|ZP_06508586.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis T92]
gi|289752748|ref|ZP_06512126.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis EAS054]
gi|289756789|ref|ZP_06516167.1| ribosomal protein L3 [Mycobacterium tuberculosis T85]
gi|289760828|ref|ZP_06520206.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis GM 1503]
gi|294996196|ref|ZP_06801887.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis 210]
gi|297633200|ref|ZP_06950980.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis KZN 4207]
gi|297730180|ref|ZP_06959298.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis KZN R506]
gi|298524192|ref|ZP_07011601.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis 94_M4241A]
gi|306774812|ref|ZP_07413149.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu001]
gi|306781456|ref|ZP_07419793.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu002]
gi|306783353|ref|ZP_07421675.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu003]
gi|306787722|ref|ZP_07426044.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu004]
gi|306794489|ref|ZP_07432791.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu005]
gi|306796455|ref|ZP_07434757.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu006]
gi|306806525|ref|ZP_07443193.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu007]
gi|306966722|ref|ZP_07479383.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu009]
gi|306970914|ref|ZP_07483575.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu010]
gi|307078644|ref|ZP_07487814.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu011]
gi|307083208|ref|ZP_07492321.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu012]
gi|313657507|ref|ZP_07814387.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis KZN V2475]
gi|42560219|sp|P60441|RL3_MYCBO RecName: Full=50S ribosomal protein L3
gi|42560220|sp|P60442|RL3_MYCTU RecName: Full=50S ribosomal protein L3
gi|166233162|sp|A1KGI2|RL3_MYCBP RecName: Full=50S ribosomal protein L3
gi|166233166|sp|A5U087|RL3_MYCTA RecName: Full=50S ribosomal protein L3
gi|254803684|sp|C1AL35|RL3_MYCBT RecName: Full=50S ribosomal protein L3
gi|1806169|emb|CAB06464.1| PROBABLE 50S RIBOSOMAL PROTEIN L3 RPLC [Mycobacterium tuberculosis
H37Rv]
gi|13880258|gb|AAK44959.1| ribosomal protein L3 [Mycobacterium tuberculosis CDC1551]
gi|31617473|emb|CAD93583.1| PROBABLE 50S RIBOSOMAL PROTEIN L3 RPLC [Mycobacterium bovis
AF2122/97]
gi|121492270|emb|CAL70737.1| Probable 50S ribosomal protein L3 rplC [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|124600080|gb|EAY59090.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis C]
gi|134149162|gb|EBA41207.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis str.
Haarlem]
gi|148504628|gb|ABQ72437.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis H37Ra]
gi|148720433|gb|ABR05058.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis F11]
gi|224772208|dbj|BAH25014.1| 50S ribosomal protein L3 [Mycobacterium bovis BCG str. Tokyo 172]
gi|253319147|gb|ACT23750.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis KZN 1435]
gi|289415021|gb|EFD12261.1| LSU ribosomal protein L3 [Mycobacterium tuberculosis T46]
gi|289419219|gb|EFD16420.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis CPHL_A]
gi|289437590|gb|EFD20083.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis KZN 605]
gi|289537740|gb|EFD42318.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis K85]
gi|289542399|gb|EFD46047.1| ribosomal protein L3 [Mycobacterium tuberculosis T17]
gi|289684953|gb|EFD52441.1| ribosomal protein L3 [Mycobacterium tuberculosis 02_1987]
gi|289689795|gb|EFD57224.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis T92]
gi|289693335|gb|EFD60764.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis EAS054]
gi|289708334|gb|EFD72350.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis GM 1503]
gi|289712353|gb|EFD76365.1| ribosomal protein L3 [Mycobacterium tuberculosis T85]
gi|298493986|gb|EFI29280.1| 50S ribosomal protein L3 [Mycobacterium tuberculosis 94_M4241A]
gi|308216702|gb|EFO76101.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu001]
gi|308325756|gb|EFP14607.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu002]
gi|308331847|gb|EFP20698.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu003]
gi|308335634|gb|EFP24485.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu004]
gi|308337249|gb|EFP26100.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu005]
gi|308343115|gb|EFP31966.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu006]
gi|308347002|gb|EFP35853.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu007]
gi|308355577|gb|EFP44428.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu009]
gi|308359535|gb|EFP48386.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu010]
gi|308363440|gb|EFP52291.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu011]
gi|308367078|gb|EFP55929.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis SUMu012]
gi|323720925|gb|EGB29991.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis CDC1551A]
gi|326905077|gb|EGE52010.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis W-148]
gi|328457425|gb|AEB02848.1| 50S ribosomal protein L3 rplC [Mycobacterium tuberculosis KZN 4207]
Length = 217
Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 91/213 (42%), Positives = 125/213 (58%), Gaps = 3/213 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ KLGMT V++ R +PVTV+ V RT +++GY AVQ+ GE + V
Sbjct: 3 RKGILGTKLGMTQVFDESNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKV 62
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+KP+ G +++ V+P++ L E R+ D VG + F G VDVTG + GKG
Sbjct: 63 NKPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKG 122
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G MKRH F G A+HG HR GS G P RVFK +MAGRMG +RVTV NL V
Sbjct: 123 FAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLV 182
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + G++L+KG VPG + ++VR + K
Sbjct: 183 HKVDAENGVLLIKGAVPG-RTGGLVMVRSAIKR 214
>gi|317054766|ref|YP_004103233.1| 50S ribosomal protein L3 [Ruminococcus albus 7]
gi|315447035|gb|ADU20599.1| 50S ribosomal protein L3 [Ruminococcus albus 7]
Length = 212
Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 92/213 (43%), Positives = 133/213 (62%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ G++ +K+GMT +++ G+ +PVTV+ C VV +T++K+GY AVQ+G GE + K
Sbjct: 1 MQKGIIGKKIGMTQIFDEAGKIVPVTVVEAGPCVVVQKKTVEKDGYEAVQLGYGEIRAKR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP++G F +V+ K+ L EFR+ D + VG + F G +VDV+G + G GF
Sbjct: 61 VNKPLQGHFKKADVAIKRTLKEFRL-ADISAVNVGDIVKADVFAEGDVVDVSGTSKGHGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
SG +KRHN L+ THG HR GS G DP R++K KKM G+ G +VTV+NL VV
Sbjct: 120 SGTIKRHNGHRLKETHGTGPVHRHAGSYGACSDPSRIYKGKKMPGQYGNVKVTVQNLTVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD + LI +KG +PG KN + + DS K
Sbjct: 180 KVDAENNLIAIKGAIPGP-KNGTVTICDSVKKK 211
>gi|313903151|ref|ZP_07836545.1| LSU ribosomal protein L3P [Thermaerobacter subterraneus DSM 13965]
gi|313466653|gb|EFR62173.1| LSU ribosomal protein L3P [Thermaerobacter subterraneus DSM 13965]
Length = 217
Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 96/210 (45%), Positives = 132/210 (62%), Gaps = 3/210 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RKLGMT +++ EGR +PVTV+ C VV RT +++GY AVQ+G GE K +
Sbjct: 1 MGVGLLGRKLGMTQIFDDEGRAVPVTVIQAGPCVVVQTRTQERDGYRAVQLGFGEIKPRK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVG-SVFSPSYFTVGQLVDVTGMTIGKG 119
V+KPM G F+ V+P + L EFR++ + + +P + F G+ VDVTG + GKG
Sbjct: 61 VNKPMAGHFARAGVNPVRVLREFRLEGEGEPMPEVGQQLTVELFKAGEYVDVTGTSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G + RH FG +HG S HR GS PGRVFK ++MAGR G RVTV+ L+V
Sbjct: 121 FLGPVARHGFGRGPMSHG-SKYHRGPGSLAPSTFPGRVFKGRRMAGRTGNRRVTVRGLQV 179
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
V VD +R L+LVKG VPG + S + +R +
Sbjct: 180 VRVDPERNLLLVKGAVPGP-RGSVVAIRKT 208
>gi|91785465|ref|YP_560671.1| 50S ribosomal protein L3 [Burkholderia xenovorans LB400]
gi|187925616|ref|YP_001897258.1| 50S ribosomal protein L3 [Burkholderia phytofirmans PsJN]
gi|296163321|ref|ZP_06846082.1| 50S ribosomal protein L3 [Burkholderia sp. Ch1-1]
gi|123062494|sp|Q13TH0|RL3_BURXL RecName: Full=50S ribosomal protein L3
gi|226725143|sp|B2T751|RL3_BURPP RecName: Full=50S ribosomal protein L3
gi|91689419|gb|ABE32619.1| LSU ribosomal protein L3P [Burkholderia xenovorans LB400]
gi|187716810|gb|ACD18034.1| ribosomal protein L3 [Burkholderia phytofirmans PsJN]
gi|295886460|gb|EFG66317.1| 50S ribosomal protein L3 [Burkholderia sp. Ch1-1]
Length = 219
Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 96/212 (45%), Positives = 130/212 (61%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G +
Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGTRRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP+ G + V + L EF++ L G+V P F VGQ VDV G++IGKG
Sbjct: 61 VTKPLAGHLAKAGVQAGEILKEFQIDAAKAAELSNGTVVGPDLFEVGQKVDVQGVSIGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KR+NF RA+HG S SH GS G QDPGRVF K+M G MG + VTV+NLE+
Sbjct: 121 YAGTIKRYNFASGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDDTVTVQNLEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+D R L+LVKG VPGA K + V + K
Sbjct: 181 ARIDADRKLLLVKGAVPGA-KGGKVFVTPAVK 211
>gi|167771267|ref|ZP_02443320.1| hypothetical protein ANACOL_02625 [Anaerotruncus colihominis DSM
17241]
gi|167666518|gb|EDS10648.1| hypothetical protein ANACOL_02625 [Anaerotruncus colihominis DSM
17241]
Length = 210
Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 86/212 (40%), Positives = 125/212 (58%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ +V +K+GMT +++ G+ IPVTV+ C VV +T + +GY AVQ+G G+ K
Sbjct: 1 MQKCIVGKKIGMTQLFDESGKMIPVTVVEAGPCVVVQKKTTENDGYEAVQLGFGDISEKA 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP++G F+ V+ K+ L EFR+ D L VG + F VG VDV G++ GKG+
Sbjct: 61 VNKPLKGHFAKAGVALKRVLREFRLD-DCSALSVGDIIKADTFAVGDAVDVAGVSKGKGY 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR L+ THG R GS G P RVFK K + G MG VTV+NL +V
Sbjct: 120 AGTIKRFGNHRLKETHGSGPVARHAGSNGACSSPSRVFKGKGLPGHMGAENVTVQNLSIV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+D + LI ++G +PGA K + + DS K+
Sbjct: 180 KIDAENNLIAIRGAIPGA-KGGVVFITDSVKA 210
>gi|284034002|ref|YP_003383933.1| 50S ribosomal protein L3 [Kribbella flavida DSM 17836]
gi|283813295|gb|ADB35134.1| ribosomal protein L3 [Kribbella flavida DSM 17836]
Length = 218
Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 94/212 (44%), Positives = 128/212 (60%), Gaps = 2/212 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ KLGMT ++ R +PVTV+ C V RT +GY VQ+ G+ + V+K
Sbjct: 9 GLLGTKLGMTQTWDENNRVVPVTVIQAGPCVVTEVRTSASHGYDGVQIAFGDIDPRKVTK 68
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P+RG F V+P++ L E R D +G F G++VDV+ + GKGF+G
Sbjct: 69 PLRGHFEKAGVTPRRHLLELR-TADASEYTLGQEIKAEAFAAGEVVDVSATSKGKGFAGV 127
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
MKRH F GLRATHGV HRS GS G PGRVFK +MAGRMG +VT +N++V ++D
Sbjct: 128 MKRHGFHGLRATHGVHKKHRSPGSIGGCATPGRVFKGLRMAGRMGNEQVTTQNVKVHAID 187
Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
+RGLIL+KG VPG K +L+R++ K A
Sbjct: 188 AERGLILIKGAVPGP-KGGLVLIRNAAKGASK 218
>gi|78044555|ref|YP_361118.1| 50S ribosomal protein L3 [Carboxydothermus hydrogenoformans Z-2901]
gi|109893418|sp|Q3A9R6|RL3_CARHZ RecName: Full=50S ribosomal protein L3
gi|77996670|gb|ABB15569.1| ribosomal protein L3 [Carboxydothermus hydrogenoformans Z-2901]
Length = 209
Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 94/213 (44%), Positives = 134/213 (62%), Gaps = 4/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT ++ +GR IPVTV+ C VV +T+ +GY A+Q+G GE K
Sbjct: 1 MPKGILGRKVGMTQIFTEDGRAIPVTVIEAGPCVVVQKKTIANDGYNAIQLGFGEIKESK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP++G F+ NV P + L E RV+ D VG FTVG+ VDVTG++ GKGF
Sbjct: 61 VNKPLKGHFNRANVKPMRYLREIRVENIDA-YEVGQEIKVDIFTVGEKVDVTGISKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KRH F HG S HR GS G + P RVF +K+ GR+G RVT++NLEVV
Sbjct: 120 AGGIKRHGFHRGPMAHG-SKYHRRPGSLG-AKGPARVFLGRKLPGRLGMERVTIQNLEVV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD +R L+++KG VPG + S ++++++ K
Sbjct: 178 KVDPERNLLVIKGSVPG-IRGSLLIIKEAVKGK 209
>gi|88812757|ref|ZP_01128003.1| 50S ribosomal protein L3 [Nitrococcus mobilis Nb-231]
gi|88789995|gb|EAR21116.1| 50S ribosomal protein L3 [Nitrococcus mobilis Nb-231]
Length = 219
Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 94/212 (44%), Positives = 129/212 (60%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK GMT ++ +G +PVTV+ ++ HR DK+GY A+QV G +
Sbjct: 1 MAIGIVGRKCGMTRLFAEDGTSVPVTVVEAAPNRITQHRREDKDGYSAIQVTTGTRRPAR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQ-KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP G + V V + L+EFR+ + + F VGQ VDVT T GKG
Sbjct: 61 VNKPQAGHVAKVGVEMGRGLWEFRLPRGVETESSDNNELRVDQFVVGQRVDVTSRTKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G +KRH+F ATHG S+SHR+ GS G QDPGRVFK K MAG +G R TV+NLE+
Sbjct: 121 FAGTVKRHHFRTQDATHGNSLSHRAPGSIGQNQDPGRVFKGKAMAGHLGAVRRTVQNLEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
V VD +R L+++KG VPG+ + ++VR + K
Sbjct: 181 VRVDTERNLLIIKGAVPGSP-GADVVVRPAIK 211
>gi|153009286|ref|YP_001370501.1| 50S ribosomal protein L3 [Ochrobactrum anthropi ATCC 49188]
gi|166233170|sp|A6X0B8|RL3_OCHA4 RecName: Full=50S ribosomal protein L3
gi|151561174|gb|ABS14672.1| ribosomal protein L3 [Ochrobactrum anthropi ATCC 49188]
Length = 238
Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 134/219 (61%), Positives = 163/219 (74%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+KLGMT VYN G +PVTVL ++NC VV RT++KNGY AVQ+G G AKVKN
Sbjct: 1 MRSGVIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGLAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SK MRG F+ V PK K+ EFRV D+LL VG+ + +F GQ VDVTG +IGKGF
Sbjct: 61 TSKAMRGHFAKAEVEPKAKVAEFRVSP-DNLLEVGAEITAEHFVAGQKVDVTGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKRHNF G RA+HG SI+HR+HGSTG RQDPG+VFK KKMAG MG RVT +N+EVV
Sbjct: 120 AGVMKRHNFAGHRASHGNSITHRAHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
S D RGLILV+G VPG+ K +WI+VRD+ K ++
Sbjct: 180 STDSDRGLILVRGAVPGS-KGAWIIVRDAVKVSLPENAP 217
>gi|121601833|ref|YP_988997.1| 50S ribosomal protein L3 [Bartonella bacilliformis KC583]
gi|121602668|ref|YP_988967.1| 50S ribosomal protein L3 [Bartonella bacilliformis KC583]
gi|212288247|sp|A1USL4|RL3_BARBK RecName: Full=50S ribosomal protein L3
gi|120614010|gb|ABM44611.1| ribosomal protein L3 [Bartonella bacilliformis KC583]
gi|120614845|gb|ABM45446.1| ribosomal protein L3 [Bartonella bacilliformis KC583]
Length = 246
Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 130/219 (59%), Positives = 161/219 (73%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+ +KLGMT +YN G R+PVTVL L+NCQV+ RT++KNGY AVQ+G G AK +
Sbjct: 1 MRSGVITQKLGMTSIYNDTGERVPVTVLRLENCQVIAQRTVEKNGYTAVQLGVGLAKFEK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SK +RG FS V PK K+ EFRV D+LL VG+ + +F GQ VDVTG +IGKGF
Sbjct: 61 TSKALRGHFSKALVEPKAKIVEFRVSS-DNLLDVGTEITVEHFVPGQRVDVTGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKRHNFGG RA+HG SI+HR+HGSTG QDPG+VFK KKMAG MG RVT +N+EVV
Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGQVRVTTQNVEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
S+D RGLILV+G V G+ K +W+LVRD+ K +
Sbjct: 180 SIDVDRGLILVRGAVSGS-KGAWVLVRDAVKKRLPDNAP 217
>gi|83720557|ref|YP_443572.1| 50S ribosomal protein L3 [Burkholderia thailandensis E264]
gi|257137645|ref|ZP_05585907.1| 50S ribosomal protein L3 [Burkholderia thailandensis E264]
gi|109893417|sp|Q2SU27|RL3_BURTA RecName: Full=50S ribosomal protein L3
gi|83654382|gb|ABC38445.1| ribosomal protein L3 [Burkholderia thailandensis E264]
Length = 219
Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 99/212 (46%), Positives = 132/212 (62%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G +
Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP+ G + V + L EFR++ D L G+V P F VGQ VDV G++IGKG
Sbjct: 61 VTKPLAGHLAKAGVQTGEILKEFRIEADKAAELSNGAVIGPDLFEVGQKVDVQGVSIGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KR+NFG RA+HG S SH GS G QDPGRVF K+M G MG VTV+NLE+
Sbjct: 121 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+D R L+LVKG VPGA K + V + K
Sbjct: 181 ARIDADRKLLLVKGAVPGA-KGGKVFVTPAVK 211
>gi|307731255|ref|YP_003908479.1| 50S ribosomal protein L3 [Burkholderia sp. CCGE1003]
gi|323527602|ref|YP_004229755.1| 50S ribosomal protein L3 [Burkholderia sp. CCGE1001]
gi|307585790|gb|ADN59188.1| 50S ribosomal protein L3 [Burkholderia sp. CCGE1003]
gi|323384604|gb|ADX56695.1| 50S ribosomal protein L3 [Burkholderia sp. CCGE1001]
Length = 219
Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 96/212 (45%), Positives = 129/212 (60%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G +
Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGTRRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP+ G + V + L EF++ L G+V P F VGQ VDV G++IGKG
Sbjct: 61 VTKPLAGHLAKAGVQAGEILKEFQIDAAKAAELSNGAVVGPDLFEVGQKVDVQGVSIGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KR+NF RA+HG S SH GS G QDPGRVF K+M G MG VTV+NLE+
Sbjct: 121 YAGTIKRYNFASGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+D R L+LVKG VPGA K + V + K
Sbjct: 181 ARIDADRKLLLVKGAVPGA-KGGKVFVTPAVK 211
>gi|238025932|ref|YP_002910163.1| 50S ribosomal protein L3 [Burkholderia glumae BGR1]
gi|237875126|gb|ACR27459.1| Ribosomal protein L3 [Burkholderia glumae BGR1]
Length = 220
Score = 216 bits (549), Expect = 3e-54, Method: Composition-based stats.
Identities = 94/214 (43%), Positives = 130/214 (60%), Gaps = 2/214 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ +G IPVTVL + + +V +T++ +GY AVQV G +
Sbjct: 5 MSLGLVGRKVGMTRIFTADGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 64
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP+ G + V + L EFR+ L G++ P F VGQ VDV G++IGKG
Sbjct: 65 VTKPLAGHLAKAGVEAGEILKEFRIDATKAAELSNGAIVGPDLFEVGQKVDVQGVSIGKG 124
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KR+NF RATHG S SH GS G QDPGRVF K+M G MG VTV+NLE+
Sbjct: 125 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTVQNLEI 184
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+D +R L+LVKG +PG K + V + K+
Sbjct: 185 ARIDAERKLLLVKGAIPG-TKGGKVFVTPAVKTK 217
>gi|315605899|ref|ZP_07880930.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 180 str.
F0310]
gi|315312181|gb|EFU60267.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 180 str.
F0310]
Length = 221
Score = 216 bits (549), Expect = 3e-54, Method: Composition-based stats.
Identities = 93/212 (43%), Positives = 133/212 (62%), Gaps = 2/212 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
++ RK+GMT V++ +G +P+TV+ + V RT++ +GY A+Q+G GE + V
Sbjct: 12 MKALLGRKIGMTQVWDADGHLVPLTVVQVGTNVVTQVRTVEVDGYSAIQLGFGEIDSRKV 71
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+ G F V+P++ L E R + D +G + F GQ VDV+G T GKGF+
Sbjct: 72 TKPLLGHFEKAGVAPRRHLAEVRTSEHDS-YELGQELDATAFEAGQSVDVSGTTKGKGFA 130
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRH F G+ A+HG +HR GS G PGR+FK +MAGRMGGNR TV+NL + +
Sbjct: 131 GVMKRHGFAGVSASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGGNRRTVQNLTIQA 190
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD ++GL+L+ G +PG KN +LVR S K A
Sbjct: 191 VDAEKGLLLISGAIPGP-KNGVVLVRSSVKGA 221
>gi|239623347|ref|ZP_04666378.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239522313|gb|EEQ62179.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 226
Score = 216 bits (549), Expect = 3e-54, Method: Composition-based stats.
Identities = 90/211 (42%), Positives = 122/211 (57%), Gaps = 3/211 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++A K+GMT ++N G +PVTVL C V +T + +GY AVQVG + + K
Sbjct: 16 MKKAILATKVGMTQIFNENGALVPVTVLQAGPCVVTQVKTAENDGYKAVQVGFVDKREKL 75
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VSKP+RG F VS K+ + EF+ ++ + V F G +D T ++ GKGF
Sbjct: 76 VSKPLRGHFDKAGVSYKRYVREFK-FENAEEYSVKDEIKADIFAAGDKIDATAISKGKGF 134
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KR+ HG S HR GS G PGRVFK K M G MG ++TV+NLEVV
Sbjct: 135 QGAIKRYGQHRGPMAHG-SKFHRHQGSNGSATTPGRVFKGKGMPGHMGSKKITVQNLEVV 193
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
VD LILVKG VPG KK S + ++++ K
Sbjct: 194 KVDTDNNLILVKGAVPGPKK-SLVTIKETVK 223
>gi|254714301|ref|ZP_05176112.1| 50S ribosomal protein L3 [Brucella ceti M644/93/1]
gi|254717738|ref|ZP_05179549.1| 50S ribosomal protein L3 [Brucella ceti M13/05/1]
gi|261219581|ref|ZP_05933862.1| 50S ribosomal protein L3 [Brucella ceti M13/05/1]
gi|261322076|ref|ZP_05961273.1| 50S ribosomal protein L3 [Brucella ceti M644/93/1]
gi|260924670|gb|EEX91238.1| 50S ribosomal protein L3 [Brucella ceti M13/05/1]
gi|261294766|gb|EEX98262.1| 50S ribosomal protein L3 [Brucella ceti M644/93/1]
Length = 237
Score = 216 bits (549), Expect = 3e-54, Method: Composition-based stats.
Identities = 137/219 (62%), Positives = 164/219 (74%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+KLGMT VYN G +PVT+L ++NC VV RT++KNGY AVQ+G G AKVKN
Sbjct: 1 MRSGVIAQKLGMTRVYNDAGEHVPVTILRMENCHVVAQRTVEKNGYTAVQLGVGMAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SK MRG F+ V PK KL EFRV D+LL VG + +F GQ VDVTG +IGKGF
Sbjct: 61 TSKAMRGHFAKAEVEPKAKLAEFRVSP-DNLLEVGVEITAEHFVAGQKVDVTGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKRHNFGG RA+HG SI+HRSHGSTG RQDPG+VFK KKMAG MG RVT +N+EVV
Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRSHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
S D RGLILV+G VPG+ K +WILVRD+ K+++
Sbjct: 180 STDSDRGLILVRGAVPGS-KGAWILVRDAVKASLPENAP 217
>gi|240167703|ref|ZP_04746362.1| 50S ribosomal protein L3 [Mycobacterium kansasii ATCC 12478]
Length = 217
Score = 216 bits (549), Expect = 3e-54, Method: Composition-based stats.
Identities = 91/213 (42%), Positives = 125/213 (58%), Gaps = 3/213 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ KLGMT V++ R +PVTV+ V RT +++GY AVQ+ GE + V
Sbjct: 3 RKGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKV 62
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+KP+ G +++ V+P++ L E R+ D VG + F G VDVTG + GKG
Sbjct: 63 TKPLTGQYTAAGVNPRRHLAELRLDDPDAVAEYEVGQELTAEIFADGSYVDVTGTSKGKG 122
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G MKRH F G A HG HR GS G P RVFK +MAGRMG +RVTV+NL V
Sbjct: 123 FAGTMKRHGFRGQGAAHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLV 182
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + G++L+KG VPG + ++VR + K
Sbjct: 183 HKVDAENGVLLIKGAVPG-RTGGLVMVRSAIKR 214
>gi|16077184|ref|NP_387997.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. subtilis str.
168]
gi|221307928|ref|ZP_03589775.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. subtilis str.
168]
gi|221312249|ref|ZP_03594054.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221317183|ref|ZP_03598477.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221321446|ref|ZP_03602740.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. subtilis str.
SMY]
gi|321313787|ref|YP_004206074.1| 50S ribosomal protein L3 [Bacillus subtilis BSn5]
gi|1710556|sp|P42920|RL3_BACSU RecName: Full=50S ribosomal protein L3; Short=BL3
gi|1165303|gb|AAC45956.1| L3 [Bacillus subtilis]
gi|2632383|emb|CAB11892.1| ribosomal protein L3 (BL3) [Bacillus subtilis subsp. subtilis str.
168]
gi|291482489|dbj|BAI83564.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. natto BEST195]
gi|320020061|gb|ADV95047.1| 50S ribosomal protein L3 [Bacillus subtilis BSn5]
Length = 209
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 92/213 (43%), Positives = 129/213 (60%), Gaps = 4/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+Q+G + + K
Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEAAPNVVLQKKTAENDGYEAIQLGFDDKREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + +PK+ + E R + D VG F+ G++VDVTG++ GKGF
Sbjct: 61 SNKPEKGHVAKAETAPKRFVKELRGVEMDA-YEVGQEVKVEIFSAGEIVDVTGVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH +HG S HR GS G DP RVFK K + GRMGG ++TV+NLE+V
Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGPV-DPNRVFKGKLLPGRMGGEQITVQNLEIV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD +R L+L+KG VPGAKK S I V+ + KS
Sbjct: 178 KVDAERNLLLIKGNVPGAKK-SLITVKSAVKSK 209
>gi|319405898|emb|CBI79530.1| 50S ribosomal protein L3 [Bartonella sp. AR 15-3]
Length = 246
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 133/219 (60%), Positives = 162/219 (73%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+KLGMT +YN G +PVTVL LD CQVV RT++KNGY AVQ+G G AK+KN
Sbjct: 1 MRSGVIAQKLGMTRIYNDAGEHVPVTVLRLDKCQVVAQRTVEKNGYTAVQLGVGLAKIKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
S+ +RG F+ V PK K+ EFRV D+LL VG+ + +F GQ VDVTG++IGKGF
Sbjct: 61 TSQALRGHFAKAVVEPKAKIAEFRVSP-DNLLGVGTEITVEHFVPGQRVDVTGISIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKRHNFGG RA+HG SI+HR+HGSTG QDPG+VFK KKMAG MG RVT +N+EVV
Sbjct: 120 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGRVRVTTQNIEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
S D RGLILV+G V G+ K SWILVRD+ K +
Sbjct: 180 STDVDRGLILVRGSVSGS-KGSWILVRDAIKKPLPDNAP 217
>gi|291521898|emb|CBK80191.1| 50S ribosomal protein L3, bacterial [Coprococcus catus GD/7]
Length = 209
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 96/212 (45%), Positives = 129/212 (60%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++ K+GMT V++ +G PVTVL C V +T++ +GY AVQVG G+ + K
Sbjct: 1 MKKAILTTKVGMTQVFSEDGVLTPVTVLQAGPCVVTQVKTVENDGYSAVQVGFGDIREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP +G F+ V+ K+ L EFR+ +D + +G F G VD T + GKGF
Sbjct: 61 VNKPKKGHFAKAGVTAKRFLKEFRL-EDAESYTLGQEIKADVFVAGDKVDATAKSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH HG S HR GS G PGRVFK K M G MG RVTV+NLEVV
Sbjct: 120 QGAIKRHGQSRGPMAHG-SKYHRHAGSNGSATTPGRVFKGKHMPGHMGAVRVTVQNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
SVD ++ LILVKG VPG KK S +++++S K+
Sbjct: 179 SVDAEKNLILVKGAVPGPKK-SLVMLKESVKA 209
>gi|170700694|ref|ZP_02891689.1| ribosomal protein L3 [Burkholderia ambifaria IOP40-10]
gi|171318348|ref|ZP_02907506.1| ribosomal protein L3 [Burkholderia ambifaria MEX-5]
gi|172059341|ref|YP_001806993.1| 50S ribosomal protein L3 [Burkholderia ambifaria MC40-6]
gi|212288249|sp|B1YRD0|RL3_BURA4 RecName: Full=50S ribosomal protein L3
gi|170134364|gb|EDT02697.1| ribosomal protein L3 [Burkholderia ambifaria IOP40-10]
gi|171096426|gb|EDT41325.1| ribosomal protein L3 [Burkholderia ambifaria MEX-5]
gi|171991858|gb|ACB62777.1| ribosomal protein L3 [Burkholderia ambifaria MC40-6]
Length = 216
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 95/214 (44%), Positives = 130/214 (60%), Gaps = 2/214 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G +
Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP+ G + V + L EFR+ L G+V F VGQ VDV G++IGKG
Sbjct: 61 VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAVVGADLFEVGQKVDVQGVSIGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KR+NF RATHG S SH GS G QDPGRVF K+M G +G VTV+NLE+
Sbjct: 121 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTVTVQNLEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+D +R L+LVKG +PGA K + V + K+
Sbjct: 181 ARIDAERKLLLVKGAIPGA-KGGKVFVTPAVKTK 213
>gi|289706533|ref|ZP_06502883.1| 50S ribosomal protein L3 [Micrococcus luteus SK58]
gi|289556668|gb|EFD50009.1| 50S ribosomal protein L3 [Micrococcus luteus SK58]
Length = 216
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 90/211 (42%), Positives = 124/211 (58%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT V++ + + IPVTV+ D V R+ + +GY AVQ+ G+ + V+
Sbjct: 8 KGLLGTKLGMTQVWDEDNKLIPVTVVKADPNVVTQLRSEETDGYTAVQIAYGQIDPRRVT 67
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP+ G F V+P++ L E R D +G + F GQ VDV G T GKGF+G
Sbjct: 68 KPLAGHFEKAGVTPRRHLVELR-TADAAEYELGQDVTVEVFEAGQKVDVVGTTKGKGFAG 126
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
AMKRH F G+ A+HG +HR GS G PGRVFK ++M GRMG R T NL + +
Sbjct: 127 AMKRHGFAGVGASHGAHKNHRKPGSVGGASTPGRVFKGQRMPGRMGAVRQTTMNLTLHGI 186
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D + L+L+KG VPG+ K +LVR + K A
Sbjct: 187 DVENNLLLIKGAVPGS-KGQVVLVRSAVKGA 216
>gi|295677932|ref|YP_003606456.1| 50S ribosomal protein L3 [Burkholderia sp. CCGE1002]
gi|295437775|gb|ADG16945.1| 50S ribosomal protein L3 [Burkholderia sp. CCGE1002]
Length = 219
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 96/212 (45%), Positives = 130/212 (61%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G +
Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP+ G + V + L EF++ L G+V P F VGQ VDV G++IGKG
Sbjct: 61 VTKPLAGHLAKAGVQAGEILKEFQIDAAKAAELSSGTVVGPELFEVGQKVDVQGVSIGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KR+NF RA+HG S SH GS G QDPGRVF K+M G MG +VTV+NLE+
Sbjct: 121 YAGTIKRYNFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDEKVTVQNLEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+D R L+LVKG VPGA K + V + K
Sbjct: 181 ARIDADRKLLLVKGAVPGA-KGGKVFVTPAVK 211
>gi|253581392|ref|ZP_04858618.1| ribosomal protein L3 [Fusobacterium varium ATCC 27725]
gi|251836756|gb|EES65290.1| ribosomal protein L3 [Fusobacterium varium ATCC 27725]
Length = 213
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 92/211 (43%), Positives = 135/211 (63%), Gaps = 3/211 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++A+K+GMT ++ +G+ IPVTV+ V+ +T++ +GY A+Q+G E K KN
Sbjct: 6 MSGILAKKIGMTQIF-EDGKFIPVTVVEAGPNYVLQKKTVENDGYTALQLGFDEKKEKNT 64
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+ G F V+P++ + E RV + +G + VD+TG + GKG +
Sbjct: 65 TKPIMGIFKKAGVNPQRFVKELRVDSVEG-FELGQEIKADVLAEVEYVDITGTSKGKGTA 123
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRHNFGG RA+HGVS +HR GS G PG+V K K+MAG+ G VTV+NL+VV
Sbjct: 124 GVMKRHNFGGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKRMAGQYGNATVTVQNLKVVK 183
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + L+L+KG VPG+ KNS+I+V+ + K
Sbjct: 184 VDVENNLLLIKGAVPGS-KNSYIVVKPAVKK 213
>gi|254468609|ref|ZP_05082015.1| ribosomal protein L3 [beta proteobacterium KB13]
gi|207087419|gb|EDZ64702.1| ribosomal protein L3 [beta proteobacterium KB13]
Length = 216
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 98/214 (45%), Positives = 133/214 (62%), Gaps = 2/214 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ +G +PVTVL + +V + +D NGY +QV G +K
Sbjct: 1 MSLGLVGRKVGMTRLFTEDGNSVPVTVLEVVPNKVTQIKKIDDNGYNGLQVSYGNSKSSK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
++K ++G + V L EFRV D+ + +G S F GQ VD+TG TIGKG
Sbjct: 61 LNKSIKGHLAKAGVDSIDGLKEFRVTGDELNNFQLGGELKVSIFEAGQKVDITGTTIGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KRH+FG RATHG SISH + GSTG QDPGRVFK KKMAG MG T +NLEV
Sbjct: 121 FQGGIKRHHFGSQRATHGNSISHNAPGSTGMCQDPGRVFKGKKMAGHMGAVTRTTQNLEV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+ VD+ R LI++KG VPG+ S + ++ + K+
Sbjct: 181 IRVDENRNLIMIKGAVPGSS-GSNVTIKPAVKAK 213
>gi|283796559|ref|ZP_06345712.1| 50S ribosomal protein L3 [Clostridium sp. M62/1]
gi|291075973|gb|EFE13337.1| 50S ribosomal protein L3 [Clostridium sp. M62/1]
gi|295092547|emb|CBK78654.1| 50S ribosomal protein L3, bacterial [Clostridium cf.
saccharolyticum K10]
gi|295115275|emb|CBL36122.1| 50S ribosomal protein L3, bacterial [butyrate-producing bacterium
SM4/1]
Length = 211
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 89/214 (41%), Positives = 124/214 (57%), Gaps = 3/214 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++A K+GMT ++N +G PVTVL C V +T + +GY AVQVG + + K
Sbjct: 1 MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQVKTAENDGYEAVQVGFVDKREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VSKP++G F VS K+ + EFR ++ V F G +D T ++ GKGF
Sbjct: 61 VSKPVKGHFDKAGVSYKRYVREFR-FENASEYSVKDEIKADIFAAGDKIDATAISKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH HG S HR GS G PGRVFK K M G+MG +VT++NLE+V
Sbjct: 120 QGAIKRHGQHRGPMAHG-SKFHRHQGSNGSATTPGRVFKGKGMPGQMGHVKVTIQNLEIV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VD + L+LVKG VPG KK S + ++++ K +
Sbjct: 179 KVDAENNLLLVKGAVPGPKK-SLVTIKETVKVSK 211
>gi|75675556|ref|YP_317977.1| 50S ribosomal protein L3 [Nitrobacter winogradskyi Nb-255]
gi|109893531|sp|Q3SSW6|RL3_NITWN RecName: Full=50S ribosomal protein L3
gi|74420426|gb|ABA04625.1| LSU ribosomal protein L3P [Nitrobacter winogradskyi Nb-255]
Length = 247
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 127/219 (57%), Positives = 159/219 (72%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT V+ G IPVTVL L NCQV+ HRT +KNGY+A+Q+G+G K
Sbjct: 1 MRSGVIAQKVGMTRVFTEAGEHIPVTVLKLSNCQVLGHRTSEKNGYVALQLGSGARKTVY 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+ K RG F+ V+PK+K+ EFRV + D L+PVG+ +F VGQ VDVTG ++GKG+
Sbjct: 61 MPKAERGQFAVAKVAPKRKVAEFRVSE-DSLIPVGAEIQADHFVVGQFVDVTGTSVGKGY 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G MG +R+T NL VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
D +RGLILV+G VPG+ K WI VRD+ K + +
Sbjct: 180 QTDVERGLILVEGAVPGS-KGGWIAVRDAVKKPLPKEAP 217
>gi|288554725|ref|YP_003426660.1| 50S ribosomal protein L3 [Bacillus pseudofirmus OF4]
gi|288545885|gb|ADC49768.1| 50S ribosomal protein L3 [Bacillus pseudofirmus OF4]
Length = 208
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 95/213 (44%), Positives = 130/213 (61%), Gaps = 5/213 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ G IPVTV+ + V+ +T++ +GY A+Q+G + K N
Sbjct: 1 MTKGILGRKIGMTQVFAENGEVIPVTVIEAEPNVVLQKKTVESDGYEAIQIGFADQKKSN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP G + N +PK+ + E ++ D L VG+ FT G +VDVTG + GKGF
Sbjct: 61 TNKPQEGHAAKANTAPKRFMKE--IRNFDASLEVGNEVKVDTFTAGDVVDVTGTSKGKGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRHN +HG S HR GS G P RVFK K + GRMGG VTV+NLE+V
Sbjct: 119 QGAIKRHNQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKLLPGRMGGETVTVQNLEIV 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD R L+LVKG VPGAKK S++ V+ + K+
Sbjct: 177 KVDTDRNLLLVKGNVPGAKK-SYVSVQSAVKAK 208
>gi|182436627|ref|YP_001824346.1| 50S ribosomal protein L3 [Streptomyces griseus subsp. griseus NBRC
13350]
gi|326777249|ref|ZP_08236514.1| 50S ribosomal protein L3 [Streptomyces cf. griseus XylebKG-1]
gi|226730571|sp|B1W407|RL3_STRGG RecName: Full=50S ribosomal protein L3
gi|178465143|dbj|BAG19663.1| putative 50S ribosomal protein L3 [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|326657582|gb|EGE42428.1| 50S ribosomal protein L3 [Streptomyces cf. griseus XylebKG-1]
Length = 214
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 98/211 (46%), Positives = 128/211 (60%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
GV+ KLGMT V++ R +PVTV+ C V RT D +GY AVQ+ GE + V+
Sbjct: 6 KGVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYEAVQIAFGEIDPRKVN 65
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G
Sbjct: 66 KPLKGHFAKADVTPRRHLVELR-TPDASEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAG 124
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRHNF GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL + +V
Sbjct: 125 VMKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIHAV 184
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D ++GL+L+KG VPG +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214
>gi|315655881|ref|ZP_07908779.1| 50S ribosomal protein L3 [Mobiluncus curtisii ATCC 51333]
gi|315656193|ref|ZP_07909084.1| 50S ribosomal protein L3 [Mobiluncus curtisii subsp. holmesii ATCC
35242]
gi|315489945|gb|EFU79572.1| 50S ribosomal protein L3 [Mobiluncus curtisii ATCC 51333]
gi|315493195|gb|EFU82795.1| 50S ribosomal protein L3 [Mobiluncus curtisii subsp. holmesii ATCC
35242]
Length = 218
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 93/211 (44%), Positives = 130/211 (61%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
++ RKLGMT V++ +G+ IPVTV+ ++ V RT + +GY AVQ+G G+ + V+
Sbjct: 10 KALLGRKLGMTQVWDEDGKLIPVTVVQVEKNVVTQIRTNETDGYDAVQLGFGKMDERKVT 69
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KPM G F+ V P++ L E R D +G F G LVDV+G T GKGF+G
Sbjct: 70 KPMAGHFAKAGVEPRRHLAEIR-TGDASSYELGQELGAEVFEAGTLVDVSGNTKGKGFAG 128
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F G+ A+HG +HR GS G PGRVFK MAGRMGGNR T+ NL+V +V
Sbjct: 129 VMKRHGFQGVSASHGAHRNHRKPGSIGACATPGRVFKGLNMAGRMGGNRRTIMNLKVQAV 188
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D ++GL+++ G +PG K +++R + K A
Sbjct: 189 DAEKGLVVLTGAIPGP-KGGIVMIRSAVKGA 218
>gi|298345472|ref|YP_003718159.1| 50S ribosomal protein L3 [Mobiluncus curtisii ATCC 43063]
gi|304391028|ref|ZP_07372980.1| 50S ribosomal protein L3 [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|298235533|gb|ADI66665.1| 50S ribosomal protein L3 [Mobiluncus curtisii ATCC 43063]
gi|304325911|gb|EFL93157.1| 50S ribosomal protein L3 [Mobiluncus curtisii subsp. curtisii ATCC
35241]
Length = 217
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 93/211 (44%), Positives = 130/211 (61%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
++ RKLGMT V++ +G+ IPVTV+ ++ V RT + +GY AVQ+G G+ + V+
Sbjct: 9 KALLGRKLGMTQVWDEDGKLIPVTVVQVEKNVVTQIRTNETDGYDAVQLGFGKMDERKVT 68
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KPM G F+ V P++ L E R D +G F G LVDV+G T GKGF+G
Sbjct: 69 KPMAGHFAKAGVEPRRHLAEIR-TGDASSYELGQELGAEVFEAGTLVDVSGNTKGKGFAG 127
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F G+ A+HG +HR GS G PGRVFK MAGRMGGNR T+ NL+V +V
Sbjct: 128 VMKRHGFQGVSASHGAHRNHRKPGSIGACATPGRVFKGLNMAGRMGGNRRTIMNLKVQAV 187
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D ++GL+++ G +PG K +++R + K A
Sbjct: 188 DAEKGLVVLTGAIPGP-KGGIVMIRSAVKGA 217
>gi|239918199|ref|YP_002957757.1| LSU ribosomal protein L3P [Micrococcus luteus NCTC 2665]
gi|281415610|ref|ZP_06247352.1| 50S ribosomal protein L3 [Micrococcus luteus NCTC 2665]
gi|239839406|gb|ACS31203.1| LSU ribosomal protein L3P [Micrococcus luteus NCTC 2665]
Length = 216
Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats.
Identities = 90/211 (42%), Positives = 124/211 (58%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT V++ + + IPVTV+ D V R+ + +GY AVQ+ G+ + V+
Sbjct: 8 KGLLGTKLGMTQVWDEDNKLIPVTVVKADPNVVTQLRSEETDGYTAVQIAYGQIDPRRVT 67
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP+ G F V+P++ L E R D +G + F GQ VDV G T GKGF+G
Sbjct: 68 KPLAGHFEKAGVTPRRHLVELR-TADAAEYSLGQDVTVEVFEAGQKVDVVGTTKGKGFAG 126
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
AMKRH F G+ A+HG +HR GS G PGRVFK ++M GRMG R T NL + +
Sbjct: 127 AMKRHGFAGVGASHGAHKNHRKPGSVGGASTPGRVFKGQRMPGRMGAVRQTTMNLTLHGI 186
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D + L+L+KG VPG+ K +LVR + K A
Sbjct: 187 DVENNLLLIKGAVPGS-KGQVVLVRSAVKGA 216
>gi|23097574|ref|NP_691040.1| 50S ribosomal protein L3 [Oceanobacillus iheyensis HTE831]
gi|42559644|sp|Q8ETY2|RL3_OCEIH RecName: Full=50S ribosomal protein L3
gi|22775797|dbj|BAC12075.1| 50S ribosomal protein L3 [Oceanobacillus iheyensis HTE831]
Length = 209
Score = 215 bits (548), Expect = 4e-54, Method: Composition-based stats.
Identities = 85/212 (40%), Positives = 124/212 (58%), Gaps = 4/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT +++ G IPVTV+ + V+ +TL+ +GY A+Q+G + K
Sbjct: 1 MTKGILGRKIGMTQLFSDNGELIPVTVIQAEPNVVLQKKTLENDGYEALQIGFADKKESR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+K +G +PK+ + E R + + VG F G+ +DVTG + GKGF
Sbjct: 61 TNKAEKGHAEKAGTAPKRYVREIRG-AEVNSFEVGQEIKVDIFESGEKIDVTGTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH THG S HR+ G+ G DP RVFK KK+ G MG +VT++NLEVV
Sbjct: 120 QGVIKRHGQQRGPTTHG-SHFHRAPGAMGVI-DPMRVFKGKKLPGHMGSEQVTIQNLEVV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
SVD + L+L+KG VPGAKK S++ + + K
Sbjct: 178 SVDTDKNLLLIKGNVPGAKK-SYVKITSAVKG 208
>gi|296168557|ref|ZP_06850361.1| 50S ribosomal protein L3 [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295896620|gb|EFG76259.1| 50S ribosomal protein L3 [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 217
Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats.
Identities = 91/213 (42%), Positives = 126/213 (59%), Gaps = 3/213 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ KLGMT V++ R +PVTV+ V RT +++GY AVQ+ GE + V
Sbjct: 3 RKGILGTKLGMTQVFDENNRIVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKV 62
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+KP+ G +S+ V+P++ L E R+ + VG + F G VDVTG + GKG
Sbjct: 63 NKPVTGQYSAAGVNPRRHLAELRLDDEAAAGEYEVGQELTAEIFADGSYVDVTGTSKGKG 122
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G MKRH F G A+HG HR GS G P RVFK +MAGRMG +RVTV+NL V
Sbjct: 123 FAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLVV 182
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + G++L+KG VPG + ++VR + K
Sbjct: 183 HKVDTENGVLLIKGAVPG-RTGGLVMVRSAIKR 214
>gi|307694152|ref|ZP_07636389.1| 50S ribosomal protein L3 [Ruminococcaceae bacterium D16]
Length = 241
Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats.
Identities = 78/220 (35%), Positives = 117/220 (53%), Gaps = 1/220 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M ++ +K+GMT +++ G +PVTV+ C VV +T +K+GY A+Q+G +
Sbjct: 1 MEKAIIGKKIGMTQIFDEAGHVVPVTVIEAGPCTVVQKKTAEKDGYEAIQLGYQTVPERK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP G + KK+ + D +G F G VDVTG++ G G+
Sbjct: 61 LTKPEVGHQKKAGLEELKKVLKEFRLDDCSKYEIGDELKADVFAAGDRVDVTGISKGHGY 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH L+ THG HR G+ DP R+FK K AG+MG +VTV NL+V+
Sbjct: 121 QGVIKRHGASRLKETHGTGPVHRHAGAMAANSDPSRIFKGKIGAGQMGNEQVTVMNLDVI 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
SVD + G+I V+G +PG K + +R+S K KG
Sbjct: 181 SVDAELGIIAVRGAIPGP-KGGVVFLRNSVKKYFEPKGAA 219
>gi|325954992|ref|YP_004238652.1| 50S ribosomal protein L3 [Weeksella virosa DSM 16922]
gi|323437610|gb|ADX68074.1| 50S ribosomal protein L3 [Weeksella virosa DSM 16922]
Length = 209
Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats.
Identities = 93/207 (44%), Positives = 129/207 (62%), Gaps = 2/207 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+ MT +++ G+ IP T++ C V RT +K+GY +VQ+G +AK KN
Sbjct: 1 MSGIIGKKVAMTSLFDENGKNIPCTIIQAGPCVVTQVRTEEKDGYKSVQLGFDDAKEKNT 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
S ++G F +PK+KL EF K D L +G G+ V VTG + GKGF
Sbjct: 61 SAALKGHFKKAGTTPKRKLVEFYGDKWVDTLNLGDEVKVDLIQEGEYVSVTGTSKGKGFQ 120
Query: 122 GAMKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH F G +ATHG R+ GS G DP RVFK +MAGRMGG +VTV+NLEV+
Sbjct: 121 GVVKRHGFGGVGQATHGQHNRLRAPGSIGAGSDPSRVFKGMRMAGRMGGKQVTVQNLEVL 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVR 207
VD ++ L++VKG VPG KNS+++VR
Sbjct: 181 KVDTEQNLLIVKGAVPGP-KNSYVIVR 206
>gi|115350322|ref|YP_772161.1| 50S ribosomal protein L3 [Burkholderia ambifaria AMMD]
gi|134294443|ref|YP_001118178.1| 50S ribosomal protein L3 [Burkholderia vietnamiensis G4]
gi|122324266|sp|Q0BJ46|RL3_BURCM RecName: Full=50S ribosomal protein L3
gi|166233128|sp|A4JAP0|RL3_BURVG RecName: Full=50S ribosomal protein L3
gi|115280310|gb|ABI85827.1| LSU ribosomal protein L3P [Burkholderia ambifaria AMMD]
gi|134137600|gb|ABO53343.1| LSU ribosomal protein L3P [Burkholderia vietnamiensis G4]
Length = 217
Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats.
Identities = 95/214 (44%), Positives = 130/214 (60%), Gaps = 2/214 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G +
Sbjct: 2 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 61
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP+ G + V + L EFR+ L G+V F VGQ VDV G++IGKG
Sbjct: 62 VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAVVGADLFEVGQKVDVQGVSIGKG 121
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KR+NF RATHG S SH GS G QDPGRVF K+M G +G VTV+NLE+
Sbjct: 122 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTVTVQNLEI 181
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+D +R L+LVKG +PGA K + V + K+
Sbjct: 182 ARIDAERKLLLVKGAIPGA-KGGKVFVTPAVKTK 214
>gi|38233085|ref|NP_938852.1| 50S ribosomal protein L3 [Corynebacterium diphtheriae NCTC 13129]
gi|42559574|sp|P60453|RL3_CORDI RecName: Full=50S ribosomal protein L3
gi|38199344|emb|CAE48977.1| 50S ribosomal protein L3 [Corynebacterium diphtheriae]
Length = 218
Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats.
Identities = 85/214 (39%), Positives = 121/214 (56%), Gaps = 2/214 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT +++ + R IPVTV+ C V RT++ +GY A+Q+ GE + +
Sbjct: 7 KGILGTKLGMTQIFDEDNRVIPVTVVEAGPCVVTQIRTVETDGYNAIQIAYGEIDPRKAN 66
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP G F V+P++ + E R+ D +G + F VDVTG T GKG++G
Sbjct: 67 KPAAGHFKKAGVTPRRHVAEIRMD-DVSGYELGQDVTVEIFEGINFVDVTGTTKGKGYAG 125
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
AMKRH F G A HG +HR G G PGRVFK +MAGRMG +RVT +NL+V +
Sbjct: 126 AMKRHGFAGQGAAHGNQAAHRRVGGIGACATPGRVFKGTRMAGRMGSDRVTTQNLKVQKI 185
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
D LIL+KG +PG + + V+ + K +
Sbjct: 186 DADANLILIKGAIPG-VRGGIVTVKTAVKGGAHA 218
>gi|262377312|ref|ZP_06070536.1| 50S ribosomal protein L3 [Acinetobacter lwoffii SH145]
gi|262307765|gb|EEY88904.1| 50S ribosomal protein L3 [Acinetobacter lwoffii SH145]
Length = 214
Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats.
Identities = 93/213 (43%), Positives = 133/213 (62%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK GMT ++ G +PVTV+ +D ++ +TL+ +GY A+Q+ GE +
Sbjct: 3 MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAIQITTGERRESR 62
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+ +G F+ V+ + + EFR + D + VG + F VGQ+VDVTG + GKG
Sbjct: 63 VTNAQKGHFAKAGVAAGRLVQEFRATEADLEGREVGGTLTVELFQVGQVVDVTGQSKGKG 122
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KR NF ATHG S+SHR GSTG Q PGRVFK KKMAG +G RVT + LE+
Sbjct: 123 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGAERVTTQGLEI 182
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V++D +R +++VKG VPGA ++VR + K+
Sbjct: 183 VAIDTERSVLVVKGAVPGA-TGGDVIVRPTIKA 214
>gi|239832122|ref|ZP_04680451.1| 50S ribosomal protein L3 [Ochrobactrum intermedium LMG 3301]
gi|239824389|gb|EEQ95957.1| 50S ribosomal protein L3 [Ochrobactrum intermedium LMG 3301]
Length = 246
Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats.
Identities = 135/219 (61%), Positives = 164/219 (74%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+KLGMT VYN G +PVTVL ++NC VV RT++KNGY AVQ+G G AKVKN
Sbjct: 9 MRSGVIAQKLGMTRVYNDAGEHVPVTVLRMENCHVVAQRTVEKNGYTAVQLGVGIAKVKN 68
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SK MRG F+ V PK K+ EFRV D+LL VG+ + +F GQ VDVTG +IGKGF
Sbjct: 69 TSKAMRGHFAKAEVEPKAKVAEFRVSP-DNLLEVGAEITAEHFVAGQKVDVTGTSIGKGF 127
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKRHNFGG RA+HG SI+HR+HGSTG RQDPG+VFK KKMAG MG RVT +N+EVV
Sbjct: 128 AGVMKRHNFGGHRASHGNSITHRAHGSTGQRQDPGKVFKGKKMAGHMGQTRVTTQNIEVV 187
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
S D RGLILV+G VPG+ K +WI+VRD+ K ++
Sbjct: 188 STDSDRGLILVRGAVPGS-KGAWIIVRDAVKVSLPENAP 225
>gi|107103776|ref|ZP_01367694.1| hypothetical protein PaerPA_01004847 [Pseudomonas aeruginosa PACS2]
Length = 200
Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats.
Identities = 92/201 (45%), Positives = 128/201 (63%), Gaps = 3/201 (1%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
MT ++ EG IPVTV+ ++ +V +T + +GY AVQV AGE + V+K G F+
Sbjct: 1 MTRIFTEEGVSIPVTVIEVEPNRVTQFKTEETDGYRAVQVTAGERRASRVTKAQAGHFAK 60
Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
NV+ + ++EFR+ ++ G + F GQ+VDVTG + GKGF+G +KR NF G
Sbjct: 61 ANVAAGRGVWEFRL--GEEQYAAGDQITVDLFQAGQMVDVTGESKGKGFAGTIKRWNFRG 118
Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
THG S+SHR GS G Q PGRVFK KKM+G +G RVTV++LE+V VD +R L+LV
Sbjct: 119 QDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHLGAERVTVQSLEIVRVDAERNLLLV 178
Query: 192 KGCVPGAKKNSWILVRDSFKS 212
KG VPGA ++VR + K+
Sbjct: 179 KGAVPGA-TGGDVIVRPAAKA 198
>gi|328675407|gb|AEB28082.1| LSU ribosomal protein L3p (L3e) [Francisella cf. novicida 3523]
Length = 210
Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats.
Identities = 98/212 (46%), Positives = 133/212 (62%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK GMT ++ +G IPVTV+ ++ +V +T + +GY A+QV G K N
Sbjct: 1 MSLGLVGRKCGMTRIFTEDGVSIPVTVVQVEANKVTQVKTTETDGYNAIQVTTGFKKRSN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP G ++ V P + L+EF + VG+ + F GQ VDV G++ GKGF
Sbjct: 61 VNKPAAGHYAKAGVEPGRGLWEFTIDN-ASEYEVGASIDATIFQAGQKVDVRGVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRHNF ATHG S+SHR HGSTG Q PGRVFKNKKMAG +G VT+++LEVV
Sbjct: 120 QGGVKRHNFATQDATHGNSLSHRVHGSTGQNQTPGRVFKNKKMAGHLGNENVTIQSLEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + GL+L+KG +PG+ I+V + KS
Sbjct: 180 RVDAENGLLLLKGGIPGSV-GGDIIVTPAVKS 210
>gi|297159597|gb|ADI09309.1| 50S ribosomal protein L3 [Streptomyces bingchenggensis BCW-1]
Length = 214
Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats.
Identities = 97/211 (45%), Positives = 126/211 (59%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
GV+ KLGMT V++ R +PVTV+ C V RT D +GY AVQ+ GE + V+
Sbjct: 6 KGVLGEKLGMTQVWDENNRIVPVTVVKAGPCVVTQVRTADSDGYDAVQIAFGEIDPRKVN 65
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP++G F+ +V+P++ L E R D +G + F G VDVTG + GKG +G
Sbjct: 66 KPLKGHFAKADVTPRRHLVELR-TADASEYALGQEVTAEVFESGVKVDVTGTSKGKGTAG 124
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +V
Sbjct: 125 VMKRHGFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D ++GL+L+KG VPG +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214
>gi|124268627|ref|YP_001022631.1| 50S ribosomal protein L3 [Methylibium petroleiphilum PM1]
gi|124261402|gb|ABM96396.1| LSU ribosomal protein L3P [Methylibium petroleiphilum PM1]
Length = 247
Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats.
Identities = 94/221 (42%), Positives = 127/221 (57%), Gaps = 4/221 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ RK+GM ++ +G +PVTVL + N +V +T++ +GY A+QV G K V
Sbjct: 30 RLGLLGRKVGMMRIFTDDGDAVPVTVLDVSNNRVTQVKTVETDGYSAIQVTFGARKASRV 89
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP G + V + L EF V + G F GQ VDV G +IGKGF
Sbjct: 90 TKPEAGHLAKAGVEAGEILREFAVSAEVAAEYKPGGTLPVGLFAAGQKVDVQGTSIGKGF 149
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KRHNFG RA+HG S SH GS QDPGRVF KKM+G G T +NL++V
Sbjct: 150 TGTIKRHNFGSQRASHGNSRSHNVPGSISMAQDPGRVFPGKKMSGHRGDVTKTTQNLDIV 209
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
VD+ R L+LV+G VPGA KN ++ VR + K V K +
Sbjct: 210 RVDEARQLLLVRGAVPGA-KNGFVTVRPAVK--VKAKKGAN 247
>gi|332041523|gb|EGI77883.1| 50S ribosomal protein L3 [Hylemonella gracilis ATCC 19624]
Length = 224
Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats.
Identities = 87/220 (39%), Positives = 124/220 (56%), Gaps = 3/220 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ RK+GM ++ +G +PVTV+ + + +V +T D +GY+A+QV G + V
Sbjct: 6 RLGLLGRKVGMMRLFTDDGDAVPVTVVDVSDNRVTQVKTQDNDGYVALQVTFGSRRASRV 65
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+KP G + V + + EFRV D + F VGQ VDV G +IGKG
Sbjct: 66 TKPQAGHLAKAGVEAGEIIQEFRVAADTAAKYQAGAKLPVTEIFAVGQKVDVQGTSIGKG 125
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G +KRHNF RA+HG S SH GS QDPGRVF K+M G MG VT +NL+V
Sbjct: 126 FAGTIKRHNFSSQRASHGNSRSHNVPGSISMAQDPGRVFPGKRMTGHMGDETVTTQNLDV 185
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
+ +D+ R L+L+KG VPG+ ++ VR + K
Sbjct: 186 IRIDEARQLLLIKGAVPGSA-GGFVTVRPAVKVQAKKGAN 224
>gi|114704484|ref|ZP_01437392.1| 50S ribosomal protein L3 [Fulvimarina pelagi HTCC2506]
gi|114539269|gb|EAU42389.1| 50S ribosomal protein L3 [Fulvimarina pelagi HTCC2506]
Length = 241
Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats.
Identities = 133/219 (60%), Positives = 167/219 (76%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT +Y G +PVTVL ++N QVV RT DKNGY AVQVGAG AKVKN
Sbjct: 1 MRSGVIAQKVGMTRIYTDAGEHVPVTVLKVENLQVVGQRTQDKNGYTAVQVGAGLAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SK MRG F+ V PK+KL EFRV + D+++ +G+ + +F GQ+VDVTG +IGKGF
Sbjct: 61 TSKAMRGVFAQAKVEPKRKLVEFRVTE-DNMIDIGAEITADHFVEGQMVDVTGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRHNFGG+RATHGVSISHR+HGSTG QDPG+VFK KKMAG MG RVT +NL++V
Sbjct: 120 AGAMKRHNFGGMRATHGVSISHRAHGSTGQNQDPGKVFKGKKMAGHMGQERVTTQNLQIV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
D ++GLILV+G VPGA K WI +RD+ K+++
Sbjct: 180 RTDAEKGLILVRGAVPGA-KGGWIEIRDAVKASLPDNAP 217
>gi|212274775|ref|NP_001130722.1| hypothetical protein LOC100191826 [Zea mays]
gi|195627984|gb|ACG35822.1| 50S ribosomal protein L3-2 [Zea mays]
Length = 318
Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats.
Identities = 104/212 (49%), Positives = 145/212 (68%), Gaps = 2/212 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+GV+ K GM+ +++ G ++P+TVL +D+ V +T +K G+ A+Q+GAG+ K K++
Sbjct: 71 RTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVTQVKTAEKEGFFALQLGAGQKKEKHL 130
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F + V K+KL EF V + D LLPVG+ + +F GQ VDVTG+T GKGF+
Sbjct: 131 TKPEVGHFRAQGVPLKRKLREFPVTE-DALLPVGTSITVRHFVPGQFVDVTGITKGKGFA 189
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR+ FGG A+HG S++HRS GSTG R PGRVFKN+KM GRMGG + TVKN+ V
Sbjct: 190 GVMKRYGFGGXPASHGTSLAHRSGGSTGQRDAPGRVFKNRKMPGRMGGVQRTVKNVWVYQ 249
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+D R L+ +KG VPG + S+I V+DS
Sbjct: 250 IDPARNLLYLKGQVPGPQ-GSFIFVKDSIYKK 280
>gi|256825886|ref|YP_003149846.1| 50S ribosomal protein L3P [Kytococcus sedentarius DSM 20547]
gi|256689279|gb|ACV07081.1| LSU ribosomal protein L3P [Kytococcus sedentarius DSM 20547]
Length = 219
Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats.
Identities = 94/210 (44%), Positives = 127/210 (60%), Gaps = 2/210 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
GV+ KLGMT V++ + R +PVTV+ + V RT D +GY AVQ+ G+ + VS
Sbjct: 12 GVLGTKLGMTQVWDEDNRLVPVTVVQVAPNVVTQIRTQDTDGYGAVQIATGDIDPRKVSN 71
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P+RG F V+P++ + E R D +G + F G VDVTG T GKGF+G
Sbjct: 72 PLRGHFEKAGVTPRRHVTELR-TADSGSYELGQELTVETFENGATVDVTGTTKGKGFAGV 130
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
MKRH F G+ A+HG +HR GS G PGRVF+ +MAGRMGG R T +NL + +VD
Sbjct: 131 MKRHGFAGVSASHGAHRNHRKPGSIGGCATPGRVFRGTRMAGRMGGERQTTQNLTIHAVD 190
Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+GL+L+KG VPGA + +LVR + K A
Sbjct: 191 ADKGLLLIKGAVPGA-RGGLVLVRSAAKGA 219
>gi|169632350|ref|YP_001706086.1| 50S ribosomal protein L3 [Acinetobacter baumannii SDF]
gi|226725117|sp|B0VQR8|RL3_ACIBS RecName: Full=50S ribosomal protein L3
gi|169151142|emb|CAO99814.1| 50S ribosomal protein L3 [Acinetobacter baumannii]
Length = 212
Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats.
Identities = 98/213 (46%), Positives = 135/213 (63%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK GMT ++ G +PVTV+ +D ++ +TL+ +GY AVQV GE +
Sbjct: 1 MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+ +G F+ V+ + + EFRV + + + VG FTVGQ+VDVTG + GKG
Sbjct: 61 VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQIVDVTGQSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KR NF ATHG S+SHR GSTG Q PGRVFK KKMAG +G RVTV+ LE+
Sbjct: 121 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VSVD +R +++VKG +PGA ++VR + K+
Sbjct: 181 VSVDTERSVLVVKGAIPGA-TGGDVIVRPAIKA 212
>gi|161523429|ref|YP_001578441.1| 50S ribosomal protein L3 [Burkholderia multivorans ATCC 17616]
gi|189351798|ref|YP_001947426.1| 50S ribosomal protein L3 [Burkholderia multivorans ATCC 17616]
gi|226725141|sp|A9ADJ3|RL3_BURM1 RecName: Full=50S ribosomal protein L3
gi|160340858|gb|ABX13944.1| ribosomal protein L3 [Burkholderia multivorans ATCC 17616]
gi|189335820|dbj|BAG44890.1| large subunit ribosomal protein L3 [Burkholderia multivorans ATCC
17616]
Length = 216
Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats.
Identities = 95/214 (44%), Positives = 132/214 (61%), Gaps = 2/214 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ EG IPVTV+ + + +V +T++ +GY AVQV G +
Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVVDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP+ G + V + L EFR+ L G++ P F VGQ VDV G++IGKG
Sbjct: 61 VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAIVGPDLFEVGQKVDVQGVSIGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KR+NFG RA+HG S SH GS G QDPGRVF K+M G MG VTV+NLE+
Sbjct: 121 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTVQNLEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+D +R L+LVKG +PGA K + V + K+
Sbjct: 181 ARIDAERKLLLVKGAIPGA-KGGKVFVTPAVKTK 213
>gi|319787925|ref|YP_004147400.1| 50S ribosomal protein L3 [Pseudoxanthomonas suwonensis 11-1]
gi|317466437|gb|ADV28169.1| 50S ribosomal protein L3 [Pseudoxanthomonas suwonensis 11-1]
Length = 216
Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats.
Identities = 97/212 (45%), Positives = 131/212 (61%), Gaps = 2/212 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V RK GM+ V+ +GR IPVT++ ++ +T++ +GY AVQV G + V
Sbjct: 6 SLGLVGRKAGMSRVFTEDGRSIPVTLIEATPNRITQIKTVEADGYSAVQVTTGARRASLV 65
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP+ G ++ V + L+EFRV + VG F VGQ+VDV G+T GKGF
Sbjct: 66 NKPLAGHYAKAKVEAGRGLWEFRVADEKIGDFAVGGEIKADIFEVGQIVDVQGVTKGKGF 125
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRHNF ATHG S+SHR+ GS G RQ PGRVF KKMAG MG + + +NLEVV
Sbjct: 126 QGTIKRHNFTMGDATHGNSLSHRAPGSIGQRQTPGRVFPGKKMAGHMGAEQQSTQNLEVV 185
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +RGLI V+G VPGA ++VR + K+
Sbjct: 186 RVDAERGLIAVRGAVPGAP-GGDVIVRPASKA 216
>gi|148381421|ref|YP_001255962.1| ribosomal protein L3 [Clostridium botulinum A str. ATCC 3502]
gi|153932935|ref|YP_001385796.1| 50S ribosomal protein L3 [Clostridium botulinum A str. ATCC 19397]
gi|153937726|ref|YP_001389203.1| 50S ribosomal protein L3 [Clostridium botulinum A str. Hall]
gi|166233132|sp|A7FZ69|RL3_CLOB1 RecName: Full=50S ribosomal protein L3
gi|166233133|sp|A5I7K6|RL3_CLOBH RecName: Full=50S ribosomal protein L3
gi|148290905|emb|CAL85041.1| 50S ribosomal protein L3 [Clostridium botulinum A str. ATCC 3502]
gi|152928979|gb|ABS34479.1| 50S ribosomal protein L3 [Clostridium botulinum A str. ATCC 19397]
gi|152933640|gb|ABS39139.1| 50S ribosomal protein L3 [Clostridium botulinum A str. Hall]
Length = 209
Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats.
Identities = 85/212 (40%), Positives = 131/212 (61%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++ +KLGMT ++N G+ IPVTV+ C V+ +T++K+GY A+QV G+ + K
Sbjct: 1 MKKAILGKKLGMTQIFNENGKVIPVTVIEAGPCTVIQKKTVEKDGYEAIQVAFGDIREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP++G F+ VS K+ + EF++ +D + L +G F G+ VD++G++ GKGF
Sbjct: 61 RNKPIKGHFAKAGVSVKRHIKEFKL-EDSNSLEIGQEIKADVFEAGERVDISGVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G ++R N +HG S HR+ GS G DP R FKNK+M G MG TV NLEVV
Sbjct: 120 QGTIRRWNAHRGPMSHG-SKFHRAVGSMGASSDPSRTFKNKRMPGHMGNVNTTVLNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+ ++ LIL+KG VPG K + +R++ K+
Sbjct: 179 RIIPEKNLILIKGGVPGPNKG-LVQIRNTVKA 209
>gi|172039995|ref|YP_001799709.1| 50S ribosomal protein L3 [Corynebacterium urealyticum DSM 7109]
gi|226725155|sp|B1VET6|RL3_CORU7 RecName: Full=50S ribosomal protein L3
gi|171851299|emb|CAQ04275.1| 50S ribosomal protein L3 [Corynebacterium urealyticum DSM 7109]
Length = 218
Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats.
Identities = 91/214 (42%), Positives = 121/214 (56%), Gaps = 2/214 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ +KLGMT +++ E R +PVTV+ C V RT D +GY AVQ+ GE + V+
Sbjct: 7 KGILGKKLGMTQIFDDENRVVPVTVVEAGPCVVTQVRTKDIDGYEAVQIAFGEIDPRKVN 66
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP G F V+P++ + E RV D VG + F VDVTG + G GF+G
Sbjct: 67 KPESGHFKKAGVTPRRHVAEIRV-ADASGYEVGQDVTVEIFNEVDFVDVTGTSKGHGFAG 125
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F G A HG +HR G G PGRVFK K+MAGRMG NRVT++NL+V V
Sbjct: 126 GMKRHGFAGQGAAHGNQAAHRRVGGIGGAATPGRVFKGKRMAGRMGNNRVTMQNLKVAKV 185
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
D L+L+KG VPG ++V+ + K
Sbjct: 186 DTDSNLLLIKGAVPG-INGGIVVVKTAVKGGAKA 218
>gi|226305341|ref|YP_002765299.1| 50S ribosomal protein L3 [Rhodococcus erythropolis PR4]
gi|229489469|ref|ZP_04383332.1| 50S ribosomal protein L3 [Rhodococcus erythropolis SK121]
gi|259709732|sp|C0ZW25|RL3_RHOE4 RecName: Full=50S ribosomal protein L3
gi|226184456|dbj|BAH32560.1| 50S ribosomal protein L3 [Rhodococcus erythropolis PR4]
gi|229323566|gb|EEN89324.1| 50S ribosomal protein L3 [Rhodococcus erythropolis SK121]
Length = 218
Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats.
Identities = 88/214 (41%), Positives = 123/214 (57%), Gaps = 2/214 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT V++ R +PVTV+ V RT +++GY AVQ+ G + V+
Sbjct: 7 KGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTQIRTEERDGYSAVQLAFGAIDPRKVN 66
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP G F+ V+P++ + E RV D VG + F G VDVTG + GKGF+G
Sbjct: 67 KPTSGQFTKAGVTPRRHVVELRV-ADTSDYEVGQELTAEVFEDGAYVDVTGTSKGKGFAG 125
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F G A+HG HR GS G PGRVFK +M+GRMG +R+T +NL V V
Sbjct: 126 TMKRHGFKGQGASHGTQAVHRRPGSIGGCATPGRVFKGMRMSGRMGSDRITTQNLSVHKV 185
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
D + GL+L+KG +PG +K ++V+ + K
Sbjct: 186 DAENGLLLIKGAIPG-RKGGLVIVKSAVKGGARA 218
>gi|309812372|ref|ZP_07706127.1| 50S ribosomal protein L3 [Dermacoccus sp. Ellin185]
gi|308433677|gb|EFP57554.1| 50S ribosomal protein L3 [Dermacoccus sp. Ellin185]
Length = 210
Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats.
Identities = 94/212 (44%), Positives = 129/212 (60%), Gaps = 2/212 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ KLGMT V++ + R IPVTV+ + C V R+ +GY AVQ+G G+ + V
Sbjct: 1 MKGLLGEKLGMTQVWDADNRLIPVTVVAVGPCVVTQLRSEGVDGYNAVQIGYGQIDPRKV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+ G F V+P++ L E R D +G + F GQ VDV G T GKGF+
Sbjct: 61 TKPLTGHFEKAGVTPRRHLAELRTS-DAGEYSLGQELTAEAFEAGQKVDVVGRTKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRH F G+ A+HG +HR GS G PGRVFK +MAGRMGG R T +NL++ +
Sbjct: 120 GVMKRHGFAGVSASHGAHRNHRKPGSIGGCATPGRVFKGMRMAGRMGGVRQTTQNLQIHA 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD ++GL+L+KG VPG + +LVR + K A
Sbjct: 180 VDAEKGLLLIKGAVPGPA-GAVVLVRTAIKGA 210
>gi|319778743|ref|YP_004129656.1| LSU ribosomal protein L3p (L3e) [Taylorella equigenitalis MCE9]
gi|317108767|gb|ADU91513.1| LSU ribosomal protein L3p (L3e) [Taylorella equigenitalis MCE9]
Length = 233
Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats.
Identities = 98/212 (46%), Positives = 128/212 (60%), Gaps = 3/212 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ RK+GM ++ EG IPVTVL + N +V ++++ +GY AVQV G + V
Sbjct: 16 RLGLLGRKVGMMRIFTDEGESIPVTVLDVSNNRVTQVKSVETDGYAAVQVAYGTRRASRV 75
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP--SYFTVGQLVDVTGMTIGKG 119
+K G ++ V L EFR+ S F VGQ VDV G TIGKG
Sbjct: 76 NKAQTGHYAKAGVEAGSILKEFRLDPAKAAEFSAGSVVAVDSVFQVGQKVDVQGTTIGKG 135
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G +KRHNFG RA+HG S SHR GS G QDPGR+F K+M+G MG TV+NL++
Sbjct: 136 FAGTIKRHNFGAQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMSGHMGDVTRTVQNLDI 195
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
V VD +RGL+LVKG VPG KNS I+V + K
Sbjct: 196 VRVDAERGLLLVKGAVPG-HKNSDIVVLPAIK 226
>gi|303256450|ref|ZP_07342464.1| 50S ribosomal protein L3 [Burkholderiales bacterium 1_1_47]
gi|331000644|ref|ZP_08324297.1| 50S ribosomal protein L3 [Parasutterella excrementihominis YIT
11859]
gi|302859941|gb|EFL83018.1| 50S ribosomal protein L3 [Burkholderiales bacterium 1_1_47]
gi|329570856|gb|EGG52567.1| 50S ribosomal protein L3 [Parasutterella excrementihominis YIT
11859]
Length = 216
Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats.
Identities = 98/213 (46%), Positives = 134/213 (62%), Gaps = 2/213 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
+ G+V RK+GMT ++ +G IPVTVL + N ++ +T++ +GY AVQV G K V
Sbjct: 4 KLGLVGRKIGMTRIFTEDGVSIPVTVLEVSNNRITQVKTVETDGYNAVQVAFGSKKPSRV 63
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SKP++G F V L EF V++D + VG S F+ GQ VDVTG TIGKGF
Sbjct: 64 SKPLKGQFEKAGVEAGSMLKEFHVEEDKIGEMKVGQTLSIDMFSEGQKVDVTGTTIGKGF 123
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GA+KRH+F RA+HG S+S + GS G RQDPGRVF K+MAG +G + T +NL +
Sbjct: 124 AGAIKRHHFSSNRASHGNSVSTNAPGSIGNRQDPGRVFPGKRMAGHLGDVQRTTQNLVIA 183
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD R LILV+G VPG N +++R + K+
Sbjct: 184 RVDADRQLILVRGAVPGCA-NGEVIIRPAVKAK 215
>gi|257454047|ref|ZP_05619321.1| 50S ribosomal protein L3 [Enhydrobacter aerosaccus SK60]
gi|257448525|gb|EEV23494.1| 50S ribosomal protein L3 [Enhydrobacter aerosaccus SK60]
Length = 212
Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats.
Identities = 94/213 (44%), Positives = 133/213 (62%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V +K GMT ++ G IPVTV+ + ++ +T D +GY A+QV GE +
Sbjct: 1 MAIGLVGKKCGMTRIFTEAGVSIPVTVVEVTANRISQIKTQDTDGYQAIQVTTGERRDSR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+ +G F+ V+ + +EFRV+ + + GS + F VGQ+VDV G + GKG
Sbjct: 61 VNAAQKGHFAKAGVAAGRGTWEFRVEDSELEGREAGSEIAADLFQVGQIVDVIGTSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KRHNF THG S+SHR GSTG Q PGRVFK KKM G+MG RVTV+ LEV
Sbjct: 121 FQGGIKRHNFRSQDWTHGNSVSHRVVGSTGQNQTPGRVFKGKKMPGQMGNKRVTVQGLEV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+SVD ++G++++KG +PGA ++VR S K+
Sbjct: 181 ISVDAEKGILVIKGAIPGA-NGGDVIVRPSVKA 212
>gi|319404425|emb|CBI78028.1| 50S ribosomal protein L3 [Bartonella rochalimae ATCC BAA-1498]
Length = 254
Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats.
Identities = 133/219 (60%), Positives = 161/219 (73%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+KLGMT +YN G +PVTVL LD CQV+ RT+ KNGY AVQ+G G AK+KN
Sbjct: 9 MRSGVIAQKLGMTRIYNDAGEHVPVTVLRLDKCQVIAQRTVKKNGYTAVQLGVGFAKIKN 68
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SK +RG F+ V PK K+ EFRV D+LL VG+ + +F GQ VDVTG++IGKGF
Sbjct: 69 TSKALRGHFAKAVVEPKAKIAEFRVSP-DNLLDVGTEITVEHFVPGQRVDVTGVSIGKGF 127
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKRHNFGG RA+HG SI+HR+HGSTG QDPG+VFK KKMAG MG RVT +N+EVV
Sbjct: 128 AGVMKRHNFGGHRASHGNSITHRAHGSTGQCQDPGKVFKGKKMAGHMGQARVTTQNIEVV 187
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
S D RGLILV+G V G+ K SWILVRD+ K +
Sbjct: 188 STDVDRGLILVRGSVSGS-KGSWILVRDAIKKRLPDNAP 225
>gi|296533987|ref|ZP_06896503.1| 50S ribosomal protein L3 [Roseomonas cervicalis ATCC 49957]
gi|296265653|gb|EFH11762.1| 50S ribosomal protein L3 [Roseomonas cervicalis ATCC 49957]
Length = 228
Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats.
Identities = 127/218 (58%), Positives = 160/218 (73%), Gaps = 2/218 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+G++A+KLGMT ++N +G +PVTVLHLD +VV RT +K+GY AVQ+G G AK KNV
Sbjct: 7 RTGLIAKKLGMTRLFNDDGSTVPVTVLHLDQVRVVAARTEEKDGYNAVQLGFGLAKPKNV 66
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SKP +G F+ V KK+ EFRV D +L G+ S ++F GQ+VDVTG + GKGF+
Sbjct: 67 SKPNKGHFAKAGVEAPKKVVEFRV-AADAMLEPGAKLSANHFVKGQIVDVTGTSKGKGFA 125
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
GAMKR NF GL ATHGVSISHRSHGSTG RQDPG+ FKNKKMAG +G RVT +NLEV
Sbjct: 126 GAMKRWNFSGLEATHGVSISHRSHGSTGNRQDPGKTFKNKKMAGHLGVERVTTQNLEVAG 185
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
D ++GL+LVKG VPGA K ++LVRD+ K+A +
Sbjct: 186 FDLEKGLLLVKGAVPGA-KGGYVLVRDAVKTARHADAP 222
>gi|209521385|ref|ZP_03270098.1| ribosomal protein L3 [Burkholderia sp. H160]
gi|209498205|gb|EDZ98347.1| ribosomal protein L3 [Burkholderia sp. H160]
Length = 219
Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats.
Identities = 96/212 (45%), Positives = 130/212 (61%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ EG IPVTVL + + +V +T++ +GY AVQV G +
Sbjct: 1 MSLGLVGRKVGMTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVTFGTRRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP+ G + V + L EF++ L G+V P F VGQ VDV G++IGKG
Sbjct: 61 VTKPLAGHLAKAGVQAGEILKEFQIDAAKAAELSNGTVVGPELFEVGQKVDVQGVSIGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KR+NF RA+HG S SH GS G QDPGRVF K+M G MG +VTV+NLE+
Sbjct: 121 YAGTIKRYNFSSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDEKVTVQNLEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+D R L+LVKG VPGA K + V + K
Sbjct: 181 ARIDADRKLLLVKGAVPGA-KGGKVFVTPAVK 211
>gi|85715131|ref|ZP_01046115.1| 50S ribosomal protein L3 [Nitrobacter sp. Nb-311A]
gi|85698046|gb|EAQ35919.1| 50S ribosomal protein L3 [Nitrobacter sp. Nb-311A]
Length = 247
Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats.
Identities = 127/219 (57%), Positives = 158/219 (72%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT V+ G IPVTVL L NCQV+ HRT +KNGY+A+Q+G+G K
Sbjct: 1 MRSGVIAQKVGMTRVFTEAGEHIPVTVLKLSNCQVLGHRTSEKNGYVALQLGSGARKTVY 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+ K RG F+ V PK+K+ EFRV + D L+PVG+ +F VGQ VDVTG ++GKG+
Sbjct: 61 MPKAERGQFAVAKVEPKRKVAEFRVSQ-DSLIPVGAEIQADHFVVGQFVDVTGTSVGKGY 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G MG +R+T NL VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
D +RGLILV+G VPG+ K WI VRD+ K + +
Sbjct: 180 QTDVERGLILVEGAVPGS-KGGWIAVRDAVKKPLPKEAP 217
>gi|325123604|gb|ADY83127.1| 50S ribosomal protein L3 [Acinetobacter calcoaceticus PHEA-2]
Length = 212
Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats.
Identities = 96/213 (45%), Positives = 134/213 (62%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK GMT ++ G +PVTV+ +D ++ +TL+ +GY AVQV GE +
Sbjct: 1 MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+ +G F+ V+ + + EFRV + + + VG F VGQ+VDVTG + GKG
Sbjct: 61 VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFAVGQIVDVTGQSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KR NF ATHG S+SHR GSTG Q PGRVFK KKMAG +G RVTV+ LE+
Sbjct: 121 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VS+D +R +++VKG +PGA ++VR + K+
Sbjct: 181 VSIDAERSVLVVKGAIPGA-TGGDVIVRPTIKA 212
>gi|160941069|ref|ZP_02088407.1| hypothetical protein CLOBOL_05962 [Clostridium bolteae ATCC
BAA-613]
gi|158436018|gb|EDP13785.1| hypothetical protein CLOBOL_05962 [Clostridium bolteae ATCC
BAA-613]
Length = 226
Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats.
Identities = 89/211 (42%), Positives = 121/211 (57%), Gaps = 3/211 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++A K+GMT ++N G +PVTVL C V +T + +GY AVQVG + + K
Sbjct: 16 MKKAILATKVGMTQIFNENGALVPVTVLQAGPCVVTQVKTAENDGYKAVQVGFVDKRDKL 75
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VSKP +G F VS K+ + EF+ ++ + V F G +D T ++ GKGF
Sbjct: 76 VSKPQKGHFDKAGVSYKRYVREFK-FENAEEYSVKDEIKADIFAAGDKIDATAISKGKGF 134
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KR+ HG S HR GS G PGRVFK K M G MG ++TV+NLEVV
Sbjct: 135 QGAIKRYGQHRGPMAHG-SKFHRHQGSNGSATTPGRVFKGKGMPGHMGSKQITVQNLEVV 193
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
VD LILVKG VPG KK S + ++++ K
Sbjct: 194 KVDVDNNLILVKGAVPGPKK-SLVTIKETVK 223
>gi|167767803|ref|ZP_02439856.1| hypothetical protein CLOSS21_02338 [Clostridium sp. SS2/1]
gi|317497095|ref|ZP_07955422.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 5_1_63FAA]
gi|167710542|gb|EDS21121.1| hypothetical protein CLOSS21_02338 [Clostridium sp. SS2/1]
gi|291558860|emb|CBL37660.1| LSU ribosomal protein L3P [butyrate-producing bacterium SSC/2]
gi|316895640|gb|EFV17795.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 5_1_63FAA]
Length = 209
Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats.
Identities = 88/212 (41%), Positives = 127/212 (59%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++ K+GMT ++N +G PVTVL C V +T + +GY AVQVG + K K
Sbjct: 1 MKKAILTTKVGMTQIFNEDGVLTPVTVLQAGPCVVTQVKTEENDGYSAVQVGFVDKKEKG 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP +G F V+PK+ + EFR ++ + VG F G +D T + GKG+
Sbjct: 61 INKPQKGHFDKAGVAPKRFVREFR-FENAEEYTVGQEIKADIFAAGDKIDATATSKGKGY 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KRH + HG S HR GS G DP +VFK KKM G+MG RVT++NLE+V
Sbjct: 120 AGGIKRHGLKSGPSAHG-SKYHRHAGSNGMASDPSKVFKGKKMPGQMGAERVTIQNLEIV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + +ILVKG VPG KK S +++++S K+
Sbjct: 179 KVDADQNIILVKGAVPGPKK-SLVMLKESVKA 209
>gi|302536251|ref|ZP_07288593.1| 50S ribosomal protein L3 [Streptomyces sp. C]
gi|302445146|gb|EFL16962.1| 50S ribosomal protein L3 [Streptomyces sp. C]
Length = 214
Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats.
Identities = 98/211 (46%), Positives = 129/211 (61%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
GV+ KLGMT V++ R +PVTV+ C V RT D +GY +VQ+ GE + V+
Sbjct: 6 KGVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTNDIDGYESVQIAFGEIDPRKVN 65
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G
Sbjct: 66 KPLKGHFAKADVTPRRHLVELRTS-DASEYTLGQEITAEVFESGVKVDVTGNSKGKGFAG 124
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRHNF GL A HGV HRS GS G PGRVFK +MAGRMG RVT +NL + +V
Sbjct: 125 VMKRHNFRGLGAGHGVQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIHAV 184
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D ++GL+L+KG VPG +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214
>gi|90424937|ref|YP_533307.1| 50S ribosomal protein L3 [Rhodopseudomonas palustris BisB18]
gi|109893548|sp|Q211E8|RL3_RHOPB RecName: Full=50S ribosomal protein L3
gi|90106951|gb|ABD88988.1| LSU ribosomal protein L3P [Rhodopseudomonas palustris BisB18]
Length = 243
Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats.
Identities = 126/219 (57%), Positives = 156/219 (71%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT V+ G IPVTVL L NCQV+ HRT +KNGY+A+Q+G+G K
Sbjct: 1 MRSGVIAQKVGMTRVFTETGEHIPVTVLKLGNCQVLGHRTTEKNGYVAMQLGSGTRKTVY 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+ K RG F+ V PK+K+ EFRV + D L+PVG+ +F VGQ VDVTG ++GKGF
Sbjct: 61 LPKAERGQFAVAKVEPKRKVAEFRVSE-DALIPVGAEIQADHFVVGQFVDVTGTSVGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR NFGGLRATHGVS+SHRS GSTG RQDPG+ FKNKKM G MG +R+T NL VV
Sbjct: 120 AGGIKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
D RGLILV+G VPG+ K WI VRD+ K +
Sbjct: 180 QTDVARGLILVEGAVPGS-KGGWIAVRDAVKKVLPADAP 217
>gi|154684634|ref|YP_001419795.1| 50S ribosomal protein L3 [Bacillus amyloliquefaciens FZB42]
gi|166233116|sp|A7Z0N8|RL3_BACA2 RecName: Full=50S ribosomal protein L3
gi|154350485|gb|ABS72564.1| RplC [Bacillus amyloliquefaciens FZB42]
Length = 209
Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats.
Identities = 89/213 (41%), Positives = 129/213 (60%), Gaps = 4/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+Q+G + + K
Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEAAPNVVLQKKTAENDGYEAIQLGFDDKREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + +PK+ + E R D +G F+ G++VDVTG++ GKGF
Sbjct: 61 SNKPEKGHVAKAETAPKRFVKELRGVDMDA-YEIGQEVKVEIFSAGEIVDVTGVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH +HG S HR GS G DP RVFK K + GRMGG+++TV+NLE+V
Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGPV-DPNRVFKGKLLPGRMGGDQITVQNLEIV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD +R L+L+KG VPGA+K + I V+ + KS
Sbjct: 178 KVDAERNLLLIKGNVPGARK-TLITVKSAVKSK 209
>gi|260362276|ref|ZP_05775243.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus K5030]
gi|308111331|gb|EFO48871.1| 50S ribosomal protein L3 [Vibrio parahaemolyticus K5030]
Length = 200
Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats.
Identities = 89/191 (46%), Positives = 121/191 (63%), Gaps = 1/191 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT V+ EG IPVTV+ ++ +V +TL+ +GY A+QV AG K V
Sbjct: 1 MIGLIGRKVGMTRVFTEEGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGSKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+K G F+ V + L+EFR++ ++ VG+ + F + VDVTG + GKGF
Sbjct: 61 NKAEAGHFAKAGVEAGRGLWEFRLENGEE-FEVGAELTVELFNETKKVDVTGTSKGKGFQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
GA+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V
Sbjct: 120 GAVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVR 179
Query: 182 VDDKRGLILVK 192
VD +R L+L+K
Sbjct: 180 VDAERNLLLIK 190
>gi|119511179|ref|ZP_01630296.1| 50S ribosomal protein L3 [Nodularia spumigena CCY9414]
gi|119464167|gb|EAW45087.1| 50S ribosomal protein L3 [Nodularia spumigena CCY9414]
Length = 211
Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats.
Identities = 85/211 (40%), Positives = 124/211 (58%), Gaps = 3/211 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ KLGMT V++ G IPVTV+ C V +T +GY A+Q+G GE K K
Sbjct: 1 MSVGILGTKLGMTQVFDEAGVSIPVTVVQAGPCTVTQVKTKQTDGYSAIQLGYGEVKPKA 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+++P+ G + + + L E+ D +G F+ GQ+VDV G +IG+GF
Sbjct: 61 LNRPLLGHLAKSSAPALRHLNEYHTDSPSD-YALGQELKADIFSEGQIVDVVGTSIGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G KR+NFG +HG S +HR+ GS G PGRV+ K+MAGR+GG RVT++ L VV
Sbjct: 120 AGNQKRNNFGRGPMSHG-SKNHRAPGSIGAGTTPGRVYPGKRMAGRLGGTRVTIRKLTVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
VD +R L+L+KG +PG S + + + K
Sbjct: 179 RVDLERNLLLIKGAIPGKP-GSLVNILPAKK 208
>gi|187776576|ref|ZP_02993049.1| hypothetical protein CLOSPO_00090 [Clostridium sporogenes ATCC
15579]
gi|187775235|gb|EDU39037.1| hypothetical protein CLOSPO_00090 [Clostridium sporogenes ATCC
15579]
Length = 216
Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats.
Identities = 87/212 (41%), Positives = 131/212 (61%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++ +KLGMT ++N G+ IPVTV+ C V+ +T++K+GY A+QV G+ + K
Sbjct: 8 MKKAILGKKLGMTQIFNENGKVIPVTVIEAGPCTVIQKKTVEKDGYEAIQVAFGDIREKL 67
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP++G F+ VS K+ + EF++ +D + L VG F G+ VD++G++ GKGF
Sbjct: 68 RNKPVKGHFAKAGVSVKRHIKEFKL-EDSNSLEVGQEIKADVFEAGERVDISGVSKGKGF 126
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G ++R N THG S HR+ GS G DP R FKNK+M G MG TV NLEVV
Sbjct: 127 QGTIRRWNAHRGPMTHG-SKFHRAVGSMGASSDPSRTFKNKRMPGHMGNVNTTVLNLEVV 185
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+ ++ LIL+KG VPG K + +R++ K+
Sbjct: 186 RIIPEKNLILIKGGVPGPNKG-LVQIRNTVKA 216
>gi|212637954|ref|YP_002314474.1| 50S ribosomal protein L3 [Anoxybacillus flavithermus WK1]
gi|212559434|gb|ACJ32489.1| Ribosomal protein L3 [Anoxybacillus flavithermus WK1]
Length = 208
Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats.
Identities = 86/212 (40%), Positives = 124/212 (58%), Gaps = 4/212 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY A+Q+G + + K
Sbjct: 1 MKGILGRKIGMTQVFAENGDLIPVTVIQATPNVVLQKKTIENDGYEAIQLGFEDLREKLA 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP +G + N +PK+ + E R + VG F G++VDVTG + GKGF
Sbjct: 61 NKPQKGHAAKANTTPKRFIREIRGVNLAE-YEVGQEVKVDIFNEGEIVDVTGTSKGKGFQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRH HG S HR GS G P RVFK+K++ GRMGG RVTV+NL+VV
Sbjct: 120 GVIKRHGQSRGPMAHG-SRYHRRPGSMGPIA-PNRVFKSKELPGRMGGERVTVQNLKVVK 177
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD +R LIL+KG VPG K ++++ + K+
Sbjct: 178 VDPERNLILIKGNVPGPNKG-LVIIKSAVKAK 208
>gi|323357372|ref|YP_004223768.1| ribosomal protein L3 [Microbacterium testaceum StLB037]
gi|323273743|dbj|BAJ73888.1| ribosomal protein L3 [Microbacterium testaceum StLB037]
Length = 219
Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats.
Identities = 95/212 (44%), Positives = 130/212 (61%), Gaps = 1/212 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ KLGMT V++ G+ +PVTV+ + V R+L+K+GY AVQ+G G+ + V
Sbjct: 9 SKGLLGTKLGMTQVWDENGKLVPVTVIEVAPNVVTQLRSLEKDGYNAVQIGYGQIDPRKV 68
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+ F + V+P++ L E R D + F GQLVDV G + GKG +
Sbjct: 69 NKPLTAHFDAAGVTPRRHLTEVRTADAADYTLGQELTVDGLFEAGQLVDVVGTSKGKGTA 128
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRHNF G+ A+HG +HR GS G P RVFK +MAGRMGG RVTV NL V +
Sbjct: 129 GVMKRHNFKGVSASHGAHRNHRKPGSIGASSTPSRVFKGMRMAGRMGGERVTVLNLTVHA 188
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD ++GL+LVKG VPGA + + VR++ K A
Sbjct: 189 VDAEKGLMLVKGAVPGA-RGRIVYVRNAVKGA 219
>gi|296119209|ref|ZP_06837779.1| 50S ribosomal protein L3 [Corynebacterium ammoniagenes DSM 20306]
gi|295967835|gb|EFG81090.1| 50S ribosomal protein L3 [Corynebacterium ammoniagenes DSM 20306]
Length = 217
Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats.
Identities = 84/214 (39%), Positives = 123/214 (57%), Gaps = 2/214 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ +KLGMT V++ E R +PVTV+ C V RT++ +GY A+Q+ GE + +
Sbjct: 6 KGILGKKLGMTQVFDEENRVVPVTVVEAGPCVVTQIRTVENDGYNAIQIAYGEIDPRKAN 65
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP G F V+P++ + E R+ D VG + F VDVTG + G G++G
Sbjct: 66 KPASGHFKKAGVTPRRHVAEIRMD-DVTAYEVGQDVTVEVFEGITFVDVTGTSKGHGYAG 124
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
AMKRH F G A HG +HR G G PGRVFK K+MAGRMG +RVT +NL++ +
Sbjct: 125 AMKRHGFAGQGAAHGNQAAHRRVGGIGGAATPGRVFKGKRMAGRMGSDRVTTQNLKIQKI 184
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
D + L+L+KG +PG + + V+ + K +
Sbjct: 185 DAESNLLLIKGAIPG-VRGGLVTVKTAVKGGAHA 217
>gi|168181864|ref|ZP_02616528.1| 50S ribosomal protein L3 [Clostridium botulinum Bf]
gi|237796942|ref|YP_002864494.1| 50S ribosomal protein L3 [Clostridium botulinum Ba4 str. 657]
gi|259647405|sp|C3KVQ1|RL3_CLOB6 RecName: Full=50S ribosomal protein L3
gi|182674831|gb|EDT86792.1| 50S ribosomal protein L3 [Clostridium botulinum Bf]
gi|229262333|gb|ACQ53366.1| 50S ribosomal protein L3 [Clostridium botulinum Ba4 str. 657]
Length = 209
Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats.
Identities = 86/212 (40%), Positives = 131/212 (61%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++ +KLGMT ++N G+ IPVTV+ C V+ +T++K+GY A+QV G+ + K
Sbjct: 1 MKKAILGKKLGMTQIFNENGKVIPVTVIEAGPCTVIQKKTVEKDGYEAIQVAFGDIREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP++G F+ VS K+ + EF++ +D + L +G F G+ VD++G++ GKGF
Sbjct: 61 RNKPVKGHFAKAGVSVKRHIKEFKL-EDSNSLEIGQEIKADVFEAGERVDISGVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G ++R N THG S HR+ GS G DP R FKNK+M G MG TV NLEVV
Sbjct: 120 QGTIRRWNAHRGPMTHG-SKFHRAVGSMGASSDPSRTFKNKRMPGHMGNVNTTVLNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+ ++ LIL+KG VPG K + +R++ K+
Sbjct: 179 RIIPEKNLILIKGGVPGPNKG-LVQIRNTVKA 209
>gi|153940129|ref|YP_001392834.1| 50S ribosomal protein L3 [Clostridium botulinum F str. Langeland]
gi|168178832|ref|ZP_02613496.1| ribosomal protein L3 [Clostridium botulinum NCTC 2916]
gi|170758623|ref|YP_001788821.1| 50S ribosomal protein L3 [Clostridium botulinum A3 str. Loch Maree]
gi|166233134|sp|A7GJ74|RL3_CLOBL RecName: Full=50S ribosomal protein L3
gi|226725154|sp|B1KSM5|RL3_CLOBM RecName: Full=50S ribosomal protein L3
gi|152936025|gb|ABS41523.1| 50S ribosomal protein L3 [Clostridium botulinum F str. Langeland]
gi|169405612|gb|ACA54023.1| 50S ribosomal protein L3 [Clostridium botulinum A3 str. Loch Maree]
gi|182670248|gb|EDT82224.1| ribosomal protein L3 [Clostridium botulinum NCTC 2916]
gi|295320814|gb|ADG01192.1| 50S ribosomal protein L3 [Clostridium botulinum F str. 230613]
Length = 209
Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats.
Identities = 85/212 (40%), Positives = 131/212 (61%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++ +KLGMT ++N G+ IPVTV+ C V+ +T++K+GY A+QV G+ + K
Sbjct: 1 MKKAILGKKLGMTQIFNENGKVIPVTVIEAGPCTVIQKKTVEKDGYEAIQVAFGDIREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP++G F+ VS K+ + EF++ +D + L +G F G+ VD++G++ GKGF
Sbjct: 61 RNKPVKGHFAKAGVSVKRHIKEFKL-EDSNSLEIGQEIKADVFEAGERVDISGVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G ++R N +HG S HR+ GS G DP R FKNK+M G MG TV NLEVV
Sbjct: 120 QGTIRRWNAHRGPMSHG-SKFHRAVGSMGASSDPSRTFKNKRMPGHMGNVNTTVLNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+ ++ LIL+KG VPG K + +R++ K+
Sbjct: 179 RIIPEKNLILIKGGVPGPNKG-LVQIRNTVKA 209
>gi|313112880|ref|ZP_07798526.1| 50S ribosomal protein L3 [Faecalibacterium cf. prausnitzii KLE1255]
gi|310624785|gb|EFQ08094.1| 50S ribosomal protein L3 [Faecalibacterium cf. prausnitzii KLE1255]
Length = 210
Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats.
Identities = 91/212 (42%), Positives = 126/212 (59%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT +++ G+ +PVTV+ C VV +T++ +GY AVQ+G GE K
Sbjct: 1 MVKGIIGKKVGMTQLFDANGKVVPVTVIEAGPCTVVQKKTVESDGYQAVQLGFGEVSAKK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+K G F NV+PKK L EFR+ +D + VG V F G VDV G++ GKG+
Sbjct: 61 VNKAAAGHFKKANVAPKKTLREFRL-EDVSAMNVGDVLKADVFAEGDKVDVVGVSKGKGY 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR+ LR +HG R GS G P RVF K++ G MG RVTV+NL VV
Sbjct: 120 QGVIKRYGQHRLRESHGTGPVARHAGSNGSTSTPARVFPGKRLPGHMGFVRVTVQNLTVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + LI VKG VPG+ K + I + +S K+
Sbjct: 180 KVDTENNLIAVKGAVPGS-KGTIITLANSVKA 210
>gi|183981053|ref|YP_001849344.1| 50S ribosomal protein L3 RplC [Mycobacterium marinum M]
gi|226730539|sp|B2HSN1|RL3_MYCMM RecName: Full=50S ribosomal protein L3
gi|183174379|gb|ACC39489.1| 50S ribosomal protein L3 RplC [Mycobacterium marinum M]
Length = 217
Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats.
Identities = 89/213 (41%), Positives = 127/213 (59%), Gaps = 3/213 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ KLGMT V++ + +PVTV+ V RT +++GY AVQ+ GE + V
Sbjct: 3 RKGILGTKLGMTQVFDENNKVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKV 62
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+KP+ G +++ V+P++ L E R+ + VG + F G VDVTG + GKG
Sbjct: 63 NKPVTGQYTAAGVNPRRHLAELRLDDAEAVTEYEVGQELTAEIFADGSYVDVTGTSKGKG 122
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G MKRH F G A+HG HR GS G P RVFK +MAGRMG +RVTV+NL V
Sbjct: 123 FAGTMKRHGFSGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLV 182
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD ++G++L+KG VPG + ++VR + K
Sbjct: 183 HKVDAEQGVLLIKGAVPG-RTGGLVMVRSAIKR 214
>gi|182678337|ref|YP_001832483.1| 50S ribosomal protein L3 [Beijerinckia indica subsp. indica ATCC
9039]
gi|226725134|sp|B2IK62|RL3_BEII9 RecName: Full=50S ribosomal protein L3
gi|182634220|gb|ACB94994.1| ribosomal protein L3 [Beijerinckia indica subsp. indica ATCC 9039]
Length = 240
Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats.
Identities = 139/220 (63%), Positives = 161/220 (73%), Gaps = 2/220 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+KLGMT V+ G IPVTVL LD CQVV HRT ++NGY+AVQ+G G AKVKN
Sbjct: 1 MRSGVIAQKLGMTRVFTDAGEHIPVTVLKLDGCQVVGHRTKEQNGYVAVQLGIGRAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VSK RG F+ V PK KL EFRV D LLP+G+ + +F VGQ VDVTG + GKGF
Sbjct: 61 VSKAERGRFAVAKVEPKLKLAEFRVD-DATLLPIGAEITADHFVVGQFVDVTGTSTGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKR NFGGLRATHGVSISHRSHGSTG RQDPG+ FKNKKMAG +G RVT NL VV
Sbjct: 120 AGAMKRWNFGGLRATHGVSISHRSHGSTGGRQDPGKTFKNKKMAGHLGTERVTTLNLRVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
D +RGLILV+G VPG WI VRD+ K + + +
Sbjct: 180 QTDVERGLILVEGAVPGTA-GGWIYVRDAVKKHLPKEAPL 218
>gi|221201565|ref|ZP_03574603.1| 50S ribosomal protein L3 [Burkholderia multivorans CGD2M]
gi|221207360|ref|ZP_03580370.1| 50S ribosomal protein L3 [Burkholderia multivorans CGD2]
gi|221213498|ref|ZP_03586473.1| 50S ribosomal protein L3 [Burkholderia multivorans CGD1]
gi|254253517|ref|ZP_04946835.1| Ribosomal protein L3 [Burkholderia dolosa AUO158]
gi|124896126|gb|EAY70006.1| Ribosomal protein L3 [Burkholderia dolosa AUO158]
gi|221166950|gb|EED99421.1| 50S ribosomal protein L3 [Burkholderia multivorans CGD1]
gi|221172948|gb|EEE05385.1| 50S ribosomal protein L3 [Burkholderia multivorans CGD2]
gi|221178381|gb|EEE10790.1| 50S ribosomal protein L3 [Burkholderia multivorans CGD2M]
Length = 220
Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats.
Identities = 95/214 (44%), Positives = 132/214 (61%), Gaps = 2/214 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ EG IPVTV+ + + +V +T++ +GY AVQV G +
Sbjct: 5 MSLGLVGRKVGMTRIFTAEGDSIPVTVVDVSDNRVTQIKTVETDGYTAVQVAFGSRRASR 64
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP+ G + V + L EFR+ L G++ P F VGQ VDV G++IGKG
Sbjct: 65 VTKPLAGHLAKAGVEAGEILKEFRIDAAKAAELSNGAIVGPDLFEVGQKVDVQGVSIGKG 124
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KR+NFG RA+HG S SH GS G QDPGRVF K+M G MG VTV+NLE+
Sbjct: 125 YAGTIKRYNFGSGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTVQNLEI 184
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+D +R L+LVKG +PGA K + V + K+
Sbjct: 185 ARIDAERKLLLVKGAIPGA-KGGKVFVTPAVKTK 217
>gi|255526578|ref|ZP_05393485.1| ribosomal protein L3 [Clostridium carboxidivorans P7]
gi|296187266|ref|ZP_06855662.1| 50S ribosomal protein L3 [Clostridium carboxidivorans P7]
gi|255509686|gb|EET86019.1| ribosomal protein L3 [Clostridium carboxidivorans P7]
gi|296048137|gb|EFG87575.1| 50S ribosomal protein L3 [Clostridium carboxidivorans P7]
Length = 209
Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats.
Identities = 83/212 (39%), Positives = 127/212 (59%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++ +KLGMT +++ G+ +PVTV+ C V +T +K+GY A+Q+G + + K
Sbjct: 1 MKKAILGKKLGMTQIFDENGKIVPVTVIEAGPCVVFQKKTTEKDGYEAIQLGFDDIREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KPM+G F+ + K+ + E RV +D VG F G+ +DV+G++ GKGF
Sbjct: 61 VNKPMKGHFAKAGAALKRFVKEIRV-EDISAYEVGQEIKADVFAAGEKIDVSGVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR N +HG S HR+ GS G DP R FKNKK+ G MG TV NLEV
Sbjct: 120 QGTIKRWNAQRGPMSHG-SKFHRAPGSMGASSDPSRTFKNKKLPGHMGNVNTTVLNLEVA 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V ++ +IL+KG VPG K ++++R++ K+
Sbjct: 179 KVMPEKNIILIKGGVPGPNKG-FVVIRNTVKA 209
>gi|118616571|ref|YP_904903.1| 50S ribosomal protein L3 [Mycobacterium ulcerans Agy99]
gi|166233167|sp|A0PM63|RL3_MYCUA RecName: Full=50S ribosomal protein L3
gi|118568681|gb|ABL03432.1| 50S ribosomal protein L3 RplC [Mycobacterium ulcerans Agy99]
Length = 217
Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats.
Identities = 88/213 (41%), Positives = 125/213 (58%), Gaps = 3/213 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ KLGMT V++ + +PVTV+ V RT +++GY AVQ+ GE + V
Sbjct: 3 RKGILGTKLGMTQVFDENNKVVPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKV 62
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+KP+ G +++ V+P++ L E R+ + VG + F G VDVTG + GKG
Sbjct: 63 NKPVTGQYTAAGVNPRRHLAELRLDDAEAVTEYEVGQELTAEIFADGSYVDVTGTSKGKG 122
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G MKRH F G A+HG HR GS G P RVFK +MAGRMG +RVTV+NL V
Sbjct: 123 FAGTMKRHGFSGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVQNLLV 182
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD ++ ++L+KG VPG + + VR + K
Sbjct: 183 HKVDAEQSVLLIKGAVPG-RTGGLVTVRSAIKR 214
>gi|319942173|ref|ZP_08016489.1| 50S ribosomal protein L3 [Sutterella wadsworthensis 3_1_45B]
gi|319804226|gb|EFW01118.1| 50S ribosomal protein L3 [Sutterella wadsworthensis 3_1_45B]
Length = 214
Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats.
Identities = 100/212 (47%), Positives = 134/212 (63%), Gaps = 2/212 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
+ G+V RK+GMT ++ +G +PVTVL + N +V + +T D +GY AVQV G K V
Sbjct: 4 KLGLVGRKIGMTRIFTDDGVSVPVTVLDVSNNRVTMVKTQDTDGYTAVQVAFGTKKPSRV 63
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SKP+ G F+ V L EFR+ + G S FT GQ VDVTG TIGKGF
Sbjct: 64 SKPLAGQFAKAGVEAACTLKEFRIDAEKAAEFKPGQTISVEIFTEGQKVDVTGTTIGKGF 123
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GA+KRH+F RA+HG S++ R+ GS G RQDPGRVF K+MAG +G + T +NL V
Sbjct: 124 AGAIKRHHFSSNRASHGNSVTTRAPGSIGNRQDPGRVFPGKRMAGHLGDVQRTTQNLVVA 183
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LV+G VPGA K ++VR + K+
Sbjct: 184 RVDKERQLLLVRGAVPGA-KGGEVIVRPAVKA 214
>gi|237743899|ref|ZP_04574380.1| LSU ribosomal protein L3P [Fusobacterium sp. 7_1]
gi|229432930|gb|EEO43142.1| LSU ribosomal protein L3P [Fusobacterium sp. 7_1]
Length = 211
Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats.
Identities = 91/213 (42%), Positives = 134/213 (62%), Gaps = 3/213 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT ++ +G+ IPVTV+ V+ +T +K+GY+A+Q+G E K KN
Sbjct: 1 MSGILGKKIGMTQIF-EDGKFIPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNT 59
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+ G F+ V P++ + E V+ D +G VD+TG + GKG S
Sbjct: 60 TKPLMGIFNKAGVKPQRFVKELAVESVDG-YELGQEIKVDVLAEVGYVDITGTSKGKGTS 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRH FGG RA+HGVS +HR GS G PG+V K K+MAG+ G VTV+NL+VV
Sbjct: 119 GVMKRHGFGGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKRMAGQHGNATVTVQNLKVVK 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VD + L+L+KG VPGA KNS+++++ + K +
Sbjct: 179 VDAEHNLLLIKGAVPGA-KNSYLVIKPAVKKVI 210
>gi|297192703|ref|ZP_06910101.1| 50S ribosomal protein L3 [Streptomyces pristinaespiralis ATCC
25486]
gi|197721642|gb|EDY65550.1| 50S ribosomal protein L3 [Streptomyces pristinaespiralis ATCC
25486]
Length = 214
Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats.
Identities = 98/211 (46%), Positives = 128/211 (60%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
GV+ KLGMT V++ R +PVTV+ C V RT D +GY +VQ+ GE + V+
Sbjct: 6 KGVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTNDIDGYESVQIAFGEIDPRKVN 65
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G
Sbjct: 66 KPLKGHFAKADVTPRRHLVELR-TPDASEYTLGQEITAEVFESGVKVDVTGKSKGKGFAG 124
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRHNF GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +V
Sbjct: 125 VMKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D ++GL+L+KG VPG +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214
>gi|239943577|ref|ZP_04695514.1| 50S ribosomal protein L3 [Streptomyces roseosporus NRRL 15998]
gi|239990030|ref|ZP_04710694.1| 50S ribosomal protein L3 [Streptomyces roseosporus NRRL 11379]
gi|291447044|ref|ZP_06586434.1| 50S ribosomal protein L3 [Streptomyces roseosporus NRRL 15998]
gi|291349991|gb|EFE76895.1| 50S ribosomal protein L3 [Streptomyces roseosporus NRRL 15998]
Length = 214
Score = 214 bits (545), Expect = 8e-54, Method: Composition-based stats.
Identities = 98/211 (46%), Positives = 129/211 (61%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
GV+ KLGMT V++ R +PVTV+ C V RT D +GY AVQ+ GE + V+
Sbjct: 6 KGVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYEAVQIAFGEIDPRKVN 65
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP++G F+ +V+P++ L E R D +G + + F G VDVTG + GKGF+G
Sbjct: 66 KPLKGHFAKADVTPRRHLVELR-TPDASEYTLGQEVTAAVFESGVKVDVTGKSKGKGFAG 124
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRHNF GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL + +V
Sbjct: 125 VMKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIHAV 184
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D ++GL+L+KG VPG +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214
>gi|256380598|ref|YP_003104258.1| ribosomal protein L3 [Actinosynnema mirum DSM 43827]
gi|255924901|gb|ACU40412.1| ribosomal protein L3 [Actinosynnema mirum DSM 43827]
Length = 216
Score = 214 bits (545), Expect = 8e-54, Method: Composition-based stats.
Identities = 91/210 (43%), Positives = 122/210 (58%), Gaps = 2/210 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT V++ R +PVTV+ + V RT + +GY AVQ+ G + V
Sbjct: 7 KGLLGTKLGMTQVFDENNRVVPVTVVKAEPNVVTQVRTQENDGYSAVQLAFGAIDPRKVI 66
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP+ G F+ V+P++ L E R D VG + F G +VDV G + GKG++G
Sbjct: 67 KPVAGHFAKAGVTPRRHLAELRTT-DASEYQVGQEITAEVFEAGAVVDVVGTSRGKGYAG 125
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F GL A+HG HRS GS G PGRVFK +MAGRMG RVT +NL+V V
Sbjct: 126 VMKRHGFAGLGASHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGHARVTTQNLKVFRV 185
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
D + GL+L+KG VPG K + V+ + K
Sbjct: 186 DAESGLLLIKGAVPGP-KGGTVFVKTAAKG 214
>gi|110802837|ref|YP_699663.1| 50S ribosomal protein L3 [Clostridium perfringens SM101]
gi|123341525|sp|Q0SQE4|RL3_CLOPS RecName: Full=50S ribosomal protein L3
gi|110683338|gb|ABG86708.1| 50S ribosomal protein L3 [Clostridium perfringens SM101]
Length = 209
Score = 214 bits (545), Expect = 8e-54, Method: Composition-based stats.
Identities = 90/212 (42%), Positives = 130/212 (61%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++ +K+GMT +++ GR IPVTV+ C VV +T++ +GY A+QVG GE + K
Sbjct: 1 MKKAIIGKKVGMTQIFDENGRVIPVTVVEAGPCVVVQKKTVETDGYDAIQVGFGELREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP RG F+ VS ++ L EFR+ +D VG F +G VDV+G++ GKGF
Sbjct: 61 VNKPRRGHFAKAGVSLRRTLKEFRM-EDVANYNVGDEIKVDTFEIGDKVDVSGVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR N +HG S HR+ GS G DP R FKNK+M G MG TV NLEVV
Sbjct: 120 QGTIKRWNASRGPMSHG-SKFHRAPGSMGAASDPSRTFKNKRMPGHMGAKNTTVLNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+ ++ +IL+KG +PG K + + +R+S K+
Sbjct: 179 KIMPEKNIILIKGGIPGPNKGTIV-IRNSVKA 209
>gi|145225625|ref|YP_001136303.1| 50S ribosomal protein L3 [Mycobacterium gilvum PYR-GCK]
gi|315445978|ref|YP_004078857.1| 50S ribosomal protein L3P [Mycobacterium sp. Spyr1]
gi|189042852|sp|A4T1U2|RL3_MYCGI RecName: Full=50S ribosomal protein L3
gi|145218111|gb|ABP47515.1| LSU ribosomal protein L3P [Mycobacterium gilvum PYR-GCK]
gi|315264281|gb|ADU01023.1| LSU ribosomal protein L3P [Mycobacterium sp. Spyr1]
Length = 218
Score = 214 bits (545), Expect = 8e-54, Method: Composition-based stats.
Identities = 90/214 (42%), Positives = 130/214 (60%), Gaps = 4/214 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ KLGMT V++ + +PVTV+ V RT +++GY AVQ+ GE + V
Sbjct: 3 RKGILGTKLGMTQVFDENNKVVPVTVVKAGPNVVTRIRTTERDGYSAVQLAYGEISPRKV 62
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDD---LLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
+KP+ G F++ V+P++ L E R+ ++D L VG + F G VDVTG + GK
Sbjct: 63 NKPVTGQFAAAGVNPRRHLAELRLADNEDAGALYEVGQELTAEIFADGAYVDVTGTSKGK 122
Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
GF+G MKRH F G A+HG HR GS G PGRVFK +M+GRMG +RVT +NL+
Sbjct: 123 GFAGTMKRHGFKGQGASHGAQAVHRRPGSIGGCATPGRVFKGTRMSGRMGSDRVTTQNLK 182
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD + G++L+KG +PG + ++VR + K
Sbjct: 183 VHKVDAENGVLLIKGAIPG-RNGGLVVVRSAIKR 215
>gi|332107866|gb|EGJ09090.1| 50S ribosomal protein L3 [Rubrivivax benzoatilyticus JA2]
Length = 223
Score = 214 bits (544), Expect = 8e-54, Method: Composition-based stats.
Identities = 97/213 (45%), Positives = 129/213 (60%), Gaps = 2/213 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ RK+GM ++ +G IPVTVL + N +V +T+ +GY A+QV G K V+K
Sbjct: 8 GLLGRKVGMMRIFTDDGDAIPVTVLDVSNNRVTQVKTVATDGYSALQVAFGARKASRVNK 67
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
P G + V + L EFRV + G+V S F GQLVDV G +IGKG++G
Sbjct: 68 PEAGHLAKAGVEAGEVLKEFRVTAEIAGQYQPGAVVPVSLFAAGQLVDVQGTSIGKGYAG 127
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRHNFG RA+HG S SH GS QDPGRVF KKM G MG VT +NL++V V
Sbjct: 128 TIKRHNFGSQRASHGNSRSHNVPGSISMAQDPGRVFPGKKMTGHMGDETVTTQNLDIVRV 187
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D+ R L+LV+G VPGA KN ++VR + K +
Sbjct: 188 DEARSLLLVRGAVPGA-KNGHVVVRPAVKVKLK 219
>gi|50086215|ref|YP_047725.1| 50S ribosomal protein L3 [Acinetobacter sp. ADP1]
gi|81827372|sp|Q6F7R2|RL3_ACIAD RecName: Full=50S ribosomal protein L3
gi|49532191|emb|CAG69903.1| 50S ribosomal protein L3 [Acinetobacter sp. ADP1]
Length = 212
Score = 214 bits (544), Expect = 8e-54, Method: Composition-based stats.
Identities = 96/213 (45%), Positives = 135/213 (63%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK GMT ++ G +PVTV+ +D ++ +TL+ +GY AVQV GE +
Sbjct: 1 MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+ +G F+ V+ + + EFRV + + + +G FTVGQ+VDVTG + GKG
Sbjct: 61 VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREIGGTIGVDLFTVGQVVDVTGQSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KR NF ATHG S+SHR GSTG Q PGRVFK KKMAG +G RVTV+ LE+
Sbjct: 121 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VS+D +R +++VKG +PGA ++VR + K+
Sbjct: 181 VSIDAERSVLVVKGAIPGA-TGGDVIVRPTIKA 212
>gi|323136086|ref|ZP_08071169.1| 50S ribosomal protein L3 [Methylocystis sp. ATCC 49242]
gi|322399177|gb|EFY01696.1| 50S ribosomal protein L3 [Methylocystis sp. ATCC 49242]
Length = 240
Score = 214 bits (544), Expect = 8e-54, Method: Composition-based stats.
Identities = 135/219 (61%), Positives = 159/219 (72%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT V+ G +PVTVL LD CQVV RT +KNGY AVQ+G G AKVKN
Sbjct: 1 MRSGVIAQKVGMTRVFTEAGEHVPVTVLKLDGCQVVAQRTKEKNGYTAVQLGIGRAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VSK R F++ V PK KL EFRV +++LLPVG+ + +F VGQ VDVTG T GKGF
Sbjct: 61 VSKAERTRFAAAKVEPKMKLAEFRV-NEEELLPVGAEITADHFVVGQFVDVTGTTTGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR FGGLRA+HGVSISHRSHGSTG RQDPG+ FKNKKMAG MG RVT +NL VV
Sbjct: 120 AGPMKRWGFGGLRASHGVSISHRSHGSTGGRQDPGKTFKNKKMAGHMGVERVTTQNLRVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
D +RGL+LV+G VPG WI VRD+ K A+
Sbjct: 180 QTDVERGLVLVEGAVPGTA-GGWIFVRDAVKRALPKDAP 217
>gi|317126861|ref|YP_004093143.1| 50S ribosomal protein L3 [Bacillus cellulosilyticus DSM 2522]
gi|315471809|gb|ADU28412.1| 50S ribosomal protein L3 [Bacillus cellulosilyticus DSM 2522]
Length = 211
Score = 214 bits (544), Expect = 8e-54, Method: Composition-based stats.
Identities = 86/213 (40%), Positives = 125/213 (58%), Gaps = 4/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G +PVTV+ V+ +T + GY A+Q+G + K
Sbjct: 1 MAKGILGKKIGMTQIFAENGEVVPVTVIEATPNVVLQKKTTEGEGYEAIQLGFDDKKQIQ 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G +PK+ + EFR+ + +G F VG +VDVTG + GKGF
Sbjct: 61 QTKPAKGHAEKAKTNPKRFVKEFRLSNVAE-YEIGQEVKVDTFAVGDIVDVTGTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRHN +HG S HR GS G DP V K K + GRMGG +VT++NLE+V
Sbjct: 120 QGAIKRHNQSRGPMSHG-SRYHRRPGSMGPV-DPNHVRKGKLLPGRMGGEQVTIQNLEIV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD +R L+LVKG VPGA+K S++ V+ + K+
Sbjct: 178 RVDTERNLLLVKGNVPGARK-SYVTVQSAVKAT 209
>gi|29831469|ref|NP_826103.1| 50S ribosomal protein L3 [Streptomyces avermitilis MA-4680]
gi|42559612|sp|Q82DP5|RL3_STRAW RecName: Full=50S ribosomal protein L3
gi|29608584|dbj|BAC72638.1| putative ribosomal protein L3 [Streptomyces avermitilis MA-4680]
Length = 214
Score = 214 bits (544), Expect = 8e-54, Method: Composition-based stats.
Identities = 96/211 (45%), Positives = 127/211 (60%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT V++ R +PVTV+ V RT D +GY +VQ+ GE + V+
Sbjct: 6 KGILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDSDGYESVQIAFGEIDPRKVN 65
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G
Sbjct: 66 KPLKGHFAKADVTPRRHLVEIR-TADASEYTLGQEITAETFEAGVKVDVTGKSKGKGFAG 124
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRHNF GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +V
Sbjct: 125 VMKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D ++GL+L+KG VPG +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214
>gi|301104340|ref|XP_002901255.1| 50S ribosomal protein L3-2 [Phytophthora infestans T30-4]
gi|262101189|gb|EEY59241.1| 50S ribosomal protein L3-2 [Phytophthora infestans T30-4]
Length = 285
Score = 214 bits (544), Expect = 9e-54, Method: Composition-based stats.
Identities = 105/212 (49%), Positives = 135/212 (63%), Gaps = 2/212 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+G++A K+GM V++ G R TVL ++ CQV +T D++G+ A+Q+G G K KNV
Sbjct: 39 RTGLLAVKIGMMPVWDNFGYRHNCTVLQVEECQVTQVKTADRHGFNALQLGVGLRKPKNV 98
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SKP+ G S V K++L EFRV + D LLP+G+ S +F GQ VDV G++ GKGF
Sbjct: 99 SKPVLGHLSKAGVPAKRQLQEFRVSE-DALLPLGTTLSALHFNAGQYVDVCGISKGKGFQ 157
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MK HNF G A+HG S + R GSTG QDPG+VFK KKM GRMGGNRVT NL +
Sbjct: 158 GVMKLHNFAGQPASHGNSKTQRHMGSTGQCQDPGKVFKGKKMPGRMGGNRVTRDNLWIAK 217
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+D R LI VKG VPG + V D+ K
Sbjct: 218 IDVDRNLIYVKGSVPG-NNGGIVRVTDARKKK 248
>gi|308172007|ref|YP_003918712.1| 50S ribosomal protein L3 (BL3) [Bacillus amyloliquefaciens DSM 7]
gi|307604871|emb|CBI41242.1| ribosomal protein L3 (BL3) [Bacillus amyloliquefaciens DSM 7]
gi|328551817|gb|AEB22309.1| 50S ribosomal protein L3 [Bacillus amyloliquefaciens TA208]
gi|328910077|gb|AEB61673.1| ribosomal protein L3 (BL3) [Bacillus amyloliquefaciens LL3]
Length = 209
Score = 214 bits (544), Expect = 9e-54, Method: Composition-based stats.
Identities = 90/213 (42%), Positives = 129/213 (60%), Gaps = 4/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+Q+G + + K
Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEAAPNVVLQKKTAENDGYEAIQLGFDDKREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + +PK+ + E R D +G F+ G++VDVTG++ GKGF
Sbjct: 61 SNKPEKGHVAKAETAPKRFVKELRGVDMDA-YEIGQEVKVEIFSAGEIVDVTGVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH +HG S HR GS G DP RVFK K + GRMGG+++TV+NLEVV
Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGPV-DPNRVFKGKLLPGRMGGDQITVQNLEVV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD +R L+L+KG VPGA+K + I V+ + KS
Sbjct: 178 KVDAERNLLLIKGNVPGARK-ALITVKSAVKSK 209
>gi|325293336|ref|YP_004279200.1| 50S ribosomal protein L3 [Agrobacterium sp. H13-3]
gi|325061189|gb|ADY64880.1| 50S ribosomal protein L3 [Agrobacterium sp. H13-3]
Length = 213
Score = 214 bits (544), Expect = 9e-54, Method: Composition-based stats.
Identities = 139/215 (64%), Positives = 170/215 (79%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT VYN G IPVTVL +DN QVV RT DKNGY AVQ+GAG++KVKN
Sbjct: 1 MRSGVIAQKVGMTRVYNDAGEHIPVTVLRMDNVQVVSQRTEDKNGYTAVQLGAGQSKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+K +RG F++ NV PK KL EFRV ++L+ +G+ + ++F GQLVDVTG TIGKGF
Sbjct: 61 TTKALRGHFAAANVEPKAKLVEFRVSP-ENLIDIGATLTATHFQAGQLVDVTGTTIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRHNFGG RA+HG S+SHR+HGSTG QDPGRV+K K+MAG MG RVT +NLEVV
Sbjct: 120 AGAMKRHNFGGGRASHGNSVSHRAHGSTGNNQDPGRVWKGKRMAGHMGQTRVTTQNLEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
S D+ RGLILVKG VPG+ K +WI+VRD+ KSA
Sbjct: 180 STDEDRGLILVKGAVPGS-KGAWIIVRDAVKSAAK 213
>gi|296333113|ref|ZP_06875567.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305672815|ref|YP_003864486.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296149729|gb|EFG90624.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305411058|gb|ADM36176.1| 50S ribosomal protein L3 [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 209
Score = 214 bits (544), Expect = 9e-54, Method: Composition-based stats.
Identities = 91/213 (42%), Positives = 129/213 (60%), Gaps = 4/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ G IPVTV+ V+ ++ + +GY A+Q+G + + K
Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEAAPNVVLQKKSTENDGYEAIQLGFDDKREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + +PK+ + E R + D VG F+ G++VDVTG++ GKGF
Sbjct: 61 SNKPEKGHVAKAETAPKRFVKELRGVEMDA-YEVGQEVKVEIFSAGEIVDVTGVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH +HG S HR GS G DP RVFK K + GRMGG ++TV+NLE+V
Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGPV-DPNRVFKGKLLPGRMGGEQITVQNLEIV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD +R L+L+KG VPGAKK S I V+ + KS
Sbjct: 178 KVDAERNLLLIKGNVPGAKK-SLITVKSAVKSK 209
>gi|262370578|ref|ZP_06063903.1| 50S ribosomal protein L3 [Acinetobacter johnsonii SH046]
gi|262314378|gb|EEY95420.1| 50S ribosomal protein L3 [Acinetobacter johnsonii SH046]
Length = 214
Score = 214 bits (544), Expect = 9e-54, Method: Composition-based stats.
Identities = 95/213 (44%), Positives = 133/213 (62%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK GMT ++ G +PVTV+ +D ++ +TL+ +GY A+Q+ GE +
Sbjct: 3 MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAIQITTGERRESR 62
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+ +G F+ V+ + + EFR + D + VG FTVGQ+VDVTG + GKG
Sbjct: 63 VTNAQKGHFAKAGVAAGRLVQEFRATEADLEGREVGGTIGVDMFTVGQVVDVTGQSKGKG 122
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KR NF ATHG S+SHR GSTG Q PGRVFK KKMAG +G RVTV+ LE+
Sbjct: 123 FQGGVKRWNFRTQDATHGNSLSHRVLGSTGQNQTPGRVFKGKKMAGHLGAERVTVQGLEI 182
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VS+D +R +++VKG +PGA + VR + K+
Sbjct: 183 VSIDAERSVLVVKGAIPGA-TGGDVTVRPTIKA 214
>gi|255326842|ref|ZP_05367918.1| 50S ribosomal protein L3 [Rothia mucilaginosa ATCC 25296]
gi|283457543|ref|YP_003362126.1| 50S ribosomal protein L3 [Rothia mucilaginosa DY-18]
gi|255296059|gb|EET75400.1| 50S ribosomal protein L3 [Rothia mucilaginosa ATCC 25296]
gi|283133541|dbj|BAI64306.1| ribosomal protein L3 [Rothia mucilaginosa DY-18]
Length = 218
Score = 214 bits (544), Expect = 9e-54, Method: Composition-based stats.
Identities = 88/211 (41%), Positives = 122/211 (57%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT V++ +G+ +PVTV+ D+ V R + +GY AVQ+G G + V+
Sbjct: 10 KGLLGTKLGMTQVWDEDGKFVPVTVVKADSNVVTQIRNQETDGYEAVQIGFGAIDSRKVT 69
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP+ G F V+P++ + E R D +G + F GQ VDV G T GKGF+G
Sbjct: 70 KPLAGHFEKAGVTPRRHIVELR-TADASEYSLGQELTVELFEAGQKVDVVGKTKGKGFAG 128
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F G+ A+HG +HR GS G P RVFK +MAGRMG R T NL + V
Sbjct: 129 VMKRHGFKGVGASHGQHKNHRKPGSIGGASYPARVFKGMRMAGRMGAARHTTLNLTIQGV 188
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D + ++L+KG +PG K +LVR + K A
Sbjct: 189 DAENNVLLIKGAIPGP-KGGVVLVRTAVKGA 218
>gi|304310016|ref|YP_003809614.1| 50S ribosomal protein L3 [gamma proteobacterium HdN1]
gi|301795749|emb|CBL43948.1| 50S ribosomal protein L3 [gamma proteobacterium HdN1]
Length = 212
Score = 214 bits (544), Expect = 9e-54, Method: Composition-based stats.
Identities = 100/213 (46%), Positives = 136/213 (63%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V +K GMT ++N +G VTV+ +D +V + +++D++GY AVQV G K
Sbjct: 1 MAIGLVGKKCGMTRIFNEDGSSTSVTVIEVDPNRVTLIKSVDRDGYSAVQVTTGVRKAST 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+K G FS V L+EFR D + L VG S F GQ VDVTG++ GKG
Sbjct: 61 VNKAEAGLFSKAGVEAGSGLWEFRFPDDAAITLSVGDSVGVSIFEAGQAVDVTGVSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G +KR NF ATHG S+SHR+ GS G RQ PGRVFK KKM+G +G +VTV++L++
Sbjct: 121 FAGVVKRWNFRTQDATHGNSLSHRAPGSIGQRQTPGRVFKGKKMSGHLGDAQVTVQSLQL 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD +R L+LVKG VPGA N+ ++VR + K
Sbjct: 181 VRVDVERNLLLVKGAVPGAAGNN-VIVRPALKG 212
>gi|297201729|ref|ZP_06919126.1| 50S ribosomal protein L3 [Streptomyces sviceus ATCC 29083]
gi|197710896|gb|EDY54930.1| 50S ribosomal protein L3 [Streptomyces sviceus ATCC 29083]
Length = 214
Score = 214 bits (544), Expect = 9e-54, Method: Composition-based stats.
Identities = 96/211 (45%), Positives = 127/211 (60%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT V++ R +PVTV+ V RT D +GY +VQ+ GE + V+
Sbjct: 6 KGILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDADGYESVQIAFGEIDPRKVN 65
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G
Sbjct: 66 KPLKGHFAKADVTPRRHLVEIR-TADASEYTLGQEITAEVFEAGIKVDVTGKSKGKGFAG 124
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRHNF GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +V
Sbjct: 125 VMKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D ++GL+L+KG VPG +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214
>gi|2113866|emb|CAA73672.1| rplC [Mycobacterium bovis BCG]
Length = 217
Score = 214 bits (544), Expect = 9e-54, Method: Composition-based stats.
Identities = 91/213 (42%), Positives = 124/213 (58%), Gaps = 3/213 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ KLGMT V++ R PVTV+ V RT +++GY AVQ+ GE + V
Sbjct: 3 RKGILGTKLGMTQVFDESNRVAPVTVVKAGPNVVTRIRTPERDGYSAVQLAYGEISPRKV 62
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+KP+ G +++ V+P++ L E R+ D VG + F G VDVTG + GKG
Sbjct: 63 NKPLTGQYTAAGVNPRRYLAELRLDDSDAATEYQVGQELTAEIFADGSYVDVTGTSKGKG 122
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G MKRH F G A+HG HR GS G P RVFK +MAGRMG +RVTV NL V
Sbjct: 123 FAGTMKRHGFRGQGASHGAQAVHRRPGSIGGCATPARVFKGTRMAGRMGNDRVTVLNLLV 182
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + G++L+KG VPG + ++VR + K
Sbjct: 183 HKVDAENGVLLIKGAVPG-RTGGLVMVRSAIKR 214
>gi|282860810|ref|ZP_06269876.1| ribosomal protein L3 [Streptomyces sp. ACTE]
gi|282564546|gb|EFB70082.1| ribosomal protein L3 [Streptomyces sp. ACTE]
Length = 214
Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 98/211 (46%), Positives = 129/211 (61%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
GV+ KLGMT V++ R +PVTV+ C V RT D +GY +VQ+ GE + V+
Sbjct: 6 KGVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYESVQIAFGEIDPRKVN 65
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G
Sbjct: 66 KPLKGHFAKADVTPRRHLVELR-TPDASEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAG 124
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRHNF GL A HGV HRS GS G PGRVFK +MAGRMG RVT +NL + +V
Sbjct: 125 VMKRHNFKGLGAGHGVQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIHAV 184
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D ++GL+L+KG VPG +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214
>gi|256027490|ref|ZP_05441324.1| 50S ribosomal protein L3P [Fusobacterium sp. D11]
gi|260495203|ref|ZP_05815331.1| 50S ribosomal protein L3 [Fusobacterium sp. 3_1_33]
gi|289765452|ref|ZP_06524830.1| LSU ribosomal protein L3P [Fusobacterium sp. D11]
gi|260197260|gb|EEW94779.1| 50S ribosomal protein L3 [Fusobacterium sp. 3_1_33]
gi|289717007|gb|EFD81019.1| LSU ribosomal protein L3P [Fusobacterium sp. D11]
Length = 211
Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 90/213 (42%), Positives = 134/213 (62%), Gaps = 3/213 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT ++ +G+ +PVTV+ V+ +T +K+GY+A+Q+G E K KN
Sbjct: 1 MSGILGKKIGMTQIF-EDGKFVPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNT 59
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+ G F+ V P++ + E V+ D +G VD+TG + GKG S
Sbjct: 60 TKPLMGIFNKAGVKPQRFVKELAVESVDG-YELGQEIKVDVLAEVGYVDITGTSKGKGTS 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRH FGG RA+HGVS +HR GS G PG+V K K+MAG+ G VTV+NL+VV
Sbjct: 119 GVMKRHGFGGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKRMAGQHGNATVTVQNLKVVK 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VD + L+L+KG VPGA KNS+++++ + K +
Sbjct: 179 VDAEHNLLLIKGAVPGA-KNSYLVIKPAVKKVI 210
>gi|258513640|ref|YP_003189862.1| 50S ribosomal protein L3 [Desulfotomaculum acetoxidans DSM 771]
gi|257777345|gb|ACV61239.1| ribosomal protein L3 [Desulfotomaculum acetoxidans DSM 771]
Length = 209
Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 90/212 (42%), Positives = 130/212 (61%), Gaps = 4/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ +GR +PVTV+ C VV +T +++GY AVQ+G GE + +
Sbjct: 1 MPKGILGKKVGMTQIFTEDGRALPVTVIEAGPCVVVQKKTPEQDGYAAVQLGFGEKRERL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP++G F V+P + L E RV+ D VG F+ G VDV G++ GKGF
Sbjct: 61 FNKPLKGHFKKYGVTPMRYLKELRVEDIDS-YEVGQEIKADLFSKGDKVDVVGISKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KRHNF HG S HR GS G + P RVFK +K+ G MG RVTV+NLE+V
Sbjct: 120 AGGIKRHNFHRGPMAHG-SKYHRRPGSLG-AKGPARVFKGRKLPGHMGVERVTVQNLEIV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R ++ VKG +PG KN +++ S K+
Sbjct: 178 KVDAERNILAVKGAIPG-NKNGLVMILTSKKA 208
>gi|169794594|ref|YP_001712387.1| 50S ribosomal protein L3 [Acinetobacter baumannii AYE]
gi|213158835|ref|YP_002320833.1| ribosomal protein L3 [Acinetobacter baumannii AB0057]
gi|215482183|ref|YP_002324365.1| Ribosomal protein L3 family protein [Acinetobacter baumannii
AB307-0294]
gi|239503234|ref|ZP_04662544.1| 50S ribosomal protein L3 [Acinetobacter baumannii AB900]
gi|294839747|ref|ZP_06784430.1| 50S ribosomal protein L3 [Acinetobacter sp. 6013113]
gi|294842653|ref|ZP_06787336.1| 50S ribosomal protein L3 [Acinetobacter sp. 6014059]
gi|294860425|ref|ZP_06798194.1| 50S ribosomal protein L3 [Acinetobacter sp. 6013150]
gi|301345010|ref|ZP_07225751.1| 50S ribosomal protein L3 [Acinetobacter baumannii AB056]
gi|301512059|ref|ZP_07237296.1| 50S ribosomal protein L3 [Acinetobacter baumannii AB058]
gi|301596104|ref|ZP_07241112.1| 50S ribosomal protein L3 [Acinetobacter baumannii AB059]
gi|226725115|sp|B7GW02|RL3_ACIB3 RecName: Full=50S ribosomal protein L3
gi|226725116|sp|B7IA39|RL3_ACIB5 RecName: Full=50S ribosomal protein L3
gi|226725118|sp|B0V6W8|RL3_ACIBY RecName: Full=50S ribosomal protein L3
gi|226725207|sp|A3M983|RL3_ACIBT RecName: Full=50S ribosomal protein L3
gi|169147521|emb|CAM85382.1| 50S ribosomal protein L3 [Acinetobacter baumannii AYE]
gi|193078477|gb|ABO13477.2| 50S ribosomal protein L3 [Acinetobacter baumannii ATCC 17978]
gi|213057995|gb|ACJ42897.1| ribosomal protein L3 [Acinetobacter baumannii AB0057]
gi|213985898|gb|ACJ56197.1| Ribosomal protein L3 family protein [Acinetobacter baumannii
AB307-0294]
gi|322509508|gb|ADX04962.1| 50S ribosomal protein L3 [Acinetobacter baumannii 1656-2]
gi|323519528|gb|ADX93909.1| 50S ribosomal protein L3 [Acinetobacter baumannii TCDC-AB0715]
Length = 212
Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 98/213 (46%), Positives = 135/213 (63%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK GMT ++ G +PVTV+ +D ++ +TL+ +GY AVQV GE +
Sbjct: 1 MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+ +G F+ V+ + + EFRV + + + VG FTVGQ+VDVTG + GKG
Sbjct: 61 VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQIVDVTGQSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KR NF ATHG S+SHR GSTG Q PGRVFK KKMAG +G RVTV+ LE+
Sbjct: 121 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VSVD +R +++VKG +PGA ++VR + K+
Sbjct: 181 VSVDTERSVLVVKGAIPGA-TGGDVIVRPTIKA 212
>gi|92117098|ref|YP_576827.1| 50S ribosomal protein L3 [Nitrobacter hamburgensis X14]
gi|123083705|sp|Q1QN30|RL3_NITHX RecName: Full=50S ribosomal protein L3
gi|91799992|gb|ABE62367.1| LSU ribosomal protein L3P [Nitrobacter hamburgensis X14]
Length = 241
Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 128/219 (58%), Positives = 157/219 (71%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT V+ G IPVTVL L NCQV+ HRT +KNGY+A+Q+G+G K
Sbjct: 1 MRSGVIAQKVGMTRVFTDAGEHIPVTVLRLSNCQVLGHRTSEKNGYVALQLGSGARKTVY 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+ K RG F+ V PK+K+ EFRV + D L+PVG+ +F VGQ VDVTG ++GKGF
Sbjct: 61 LPKAERGQFAVAKVEPKRKVAEFRVSE-DSLIPVGAEIQADHFVVGQFVDVTGTSVGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR NFGGLRATHGVS+SHRS GSTG RQDPG+ FKNKKM G MG +RVT NL VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRVTTLNLRVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
D +RGLILV+G VPG+ K WI VRD+ K +
Sbjct: 180 QTDVERGLILVEGAVPGS-KGGWIAVRDAVKKPLPKDAP 217
>gi|328884426|emb|CCA57665.1| LSU ribosomal protein L3p [Streptomyces venezuelae ATCC 10712]
Length = 218
Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 93/210 (44%), Positives = 126/210 (60%), Gaps = 2/210 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT V++ R +PVTV+ V RT D +GY +VQ+ GE + V+
Sbjct: 10 KGILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDIDGYESVQIAFGEIDPRKVN 69
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G
Sbjct: 70 KPLKGHFAKADVTPRRHLVELR-TADASEYTLGQEITAEVFEAGVKVDVTGKSKGKGFAG 128
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRHNF G +A+HG HR GS G PGRVFK +MAGRMG RVT +NL V +V
Sbjct: 129 VMKRHNFRGGKASHGAHRVHRKPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTVHAV 188
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
D ++GL+L+KG VPG +LVR + K
Sbjct: 189 DAEKGLLLIKGAVPGP-NGGLVLVRTAAKG 217
>gi|226950933|ref|YP_002806024.1| ribosomal protein L3 [Clostridium botulinum A2 str. Kyoto]
gi|254803664|sp|C1FMV1|RL3_CLOBJ RecName: Full=50S ribosomal protein L3
gi|226840834|gb|ACO83500.1| ribosomal protein L3 [Clostridium botulinum A2 str. Kyoto]
Length = 209
Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 85/212 (40%), Positives = 131/212 (61%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++ +KLGMT ++N G+ IPVTV+ C V+ +T++K+GY A+QV G+ + K
Sbjct: 1 MKKAILGKKLGMTQIFNENGKVIPVTVIEAGPCTVIQKKTVEKDGYEAIQVAFGDIREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP++G F+ VS K+ + EF++ +D + L +G F G+ VD++G++ GKGF
Sbjct: 61 RNKPVKGHFAKAGVSVKRHIKEFKL-EDLNSLEIGQEIKADVFEAGERVDISGVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G ++R N +HG S HR+ GS G DP R FKNK+M G MG TV NLEVV
Sbjct: 120 QGTIRRWNAHRGPMSHG-SKFHRAVGSMGASSDPSRTFKNKRMPGHMGNVNTTVLNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+ ++ LIL+KG VPG K + +R++ K+
Sbjct: 179 RIIPEKNLILIKGGVPGPNKG-LVQIRNTVKA 209
>gi|262373521|ref|ZP_06066799.1| 50S ribosomal protein L3 [Acinetobacter junii SH205]
gi|262311274|gb|EEY92360.1| 50S ribosomal protein L3 [Acinetobacter junii SH205]
Length = 214
Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 95/213 (44%), Positives = 135/213 (63%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK GMT ++ G +PVTV+ +D ++ +TL+ +GY A+QV GE +
Sbjct: 3 MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAIQVTTGERRESR 62
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+ +G F+ V+ + + EFRV + + + VG FTVGQ+VDVTG + GKG
Sbjct: 63 VTSAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGSIGVDLFTVGQIVDVTGQSKGKG 122
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KR NF ATHG S+SHR GSTG Q PGRVFK KKMAG +G RVTV+ LE+
Sbjct: 123 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 182
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VS+D +R +++VKG +PG+ ++VR + K+
Sbjct: 183 VSIDAERSVLVVKGAIPGS-TGGDVIVRPTIKA 214
>gi|320009102|gb|ADW03952.1| 50S ribosomal protein L3 [Streptomyces flavogriseus ATCC 33331]
Length = 214
Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 98/211 (46%), Positives = 129/211 (61%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
GV+ KLGMT V++ R +PVTV+ C V RT D +GY +VQ+ GE + V+
Sbjct: 6 KGVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYESVQIAFGEIDPRKVN 65
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G
Sbjct: 66 KPLKGHFAKADVTPRRHLVELR-TPDASEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAG 124
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRHNF GL A HGV HRS GS G PGRVFK +MAGRMG RVT +NL + +V
Sbjct: 125 VMKRHNFKGLGAGHGVQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIHAV 184
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D ++GL+L+KG VPG +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214
>gi|25027078|ref|NP_737132.1| 50S ribosomal protein L3 [Corynebacterium efficiens YS-314]
gi|259506793|ref|ZP_05749693.1| 50S ribosomal protein L3 [Corynebacterium efficiens YS-314]
gi|42559646|sp|Q8FS80|RL3_COREF RecName: Full=50S ribosomal protein L3
gi|23492358|dbj|BAC17332.1| putative 50S ribosomal protein L3 [Corynebacterium efficiens
YS-314]
gi|259165664|gb|EEW50218.1| 50S ribosomal protein L3 [Corynebacterium efficiens YS-314]
Length = 218
Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 86/214 (40%), Positives = 125/214 (58%), Gaps = 2/214 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT +++ E R IPVTV+ C V RT++ +GY A+Q+ GE + V+
Sbjct: 7 KGILGTKLGMTQIFDEENRVIPVTVVEAGPCVVSQIRTVETDGYNAIQIAYGEIDPRKVN 66
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
+P+ G F V+P++ + E R+ D VG + F + VDVTG + GKG++G
Sbjct: 67 QPLTGHFKKAGVTPRRHVTEIRMD-DVSGYEVGQDVTVEIFNDVKFVDVTGTSKGKGYAG 125
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
AMKRH F G A HG +HR G G PGR+FK K+MAGRMG +RVT +NL+V +
Sbjct: 126 AMKRHGFAGQGAGHGNQAAHRRVGGIGAAATPGRIFKGKRMAGRMGNDRVTTQNLKVQKI 185
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
D LIL+KG +PG + + V+ + K +
Sbjct: 186 DADANLILIKGAIPG-NRGGIVTVKTAVKGGAHA 218
>gi|293610824|ref|ZP_06693124.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292827168|gb|EFF85533.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 212
Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 97/213 (45%), Positives = 135/213 (63%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK GMT ++ G +PVTV+ +D ++ +TL+ +GY AVQV GE +
Sbjct: 1 MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+ +G F+ V+ + + EFRV + + + VG FTVGQ+VDVTG + GKG
Sbjct: 61 VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQVVDVTGQSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KR NF ATHG S+SHR GSTG Q PGRVFK KKMAG +G RVTV+ LE+
Sbjct: 121 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VS+D +R +++VKG +PGA ++VR + K+
Sbjct: 181 VSIDAERSVLVVKGAIPGA-TGGDVIVRPTIKA 212
>gi|291451913|ref|ZP_06591303.1| 50S ribosomal protein L3 [Streptomyces albus J1074]
gi|291354862|gb|EFE81764.1| 50S ribosomal protein L3 [Streptomyces albus J1074]
Length = 214
Score = 214 bits (544), Expect = 1e-53, Method: Composition-based stats.
Identities = 97/211 (45%), Positives = 127/211 (60%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT V++ R +PVTV+ V RT D +GY AVQ+ GE + V+
Sbjct: 6 KGILGEKLGMTQVWDENNRVVPVTVVKAGANVVTQVRTNDTDGYEAVQIAFGEIDPRKVN 65
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G
Sbjct: 66 KPLKGHFAKADVTPRRHLVEIR-TADASEYTLGQELNADTFEAGLKVDVTGKSKGKGFAG 124
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRHNF GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +V
Sbjct: 125 VMKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D ++GL+L+KG VPG +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214
>gi|295398288|ref|ZP_06808330.1| 50S ribosomal protein L3 [Aerococcus viridans ATCC 11563]
gi|294973427|gb|EFG49212.1| 50S ribosomal protein L3 [Aerococcus viridans ATCC 11563]
Length = 211
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 85/213 (39%), Positives = 125/213 (58%), Gaps = 3/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT + G +PVTV+ V+ +T + +GY A+QVG +
Sbjct: 1 MTKGILGKKVGMTQFFTETGELVPVTVIEAQPNVVLQAKTNETDGYEAIQVGFDNKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + +PK+ + EF+ + D VGS F G +VDVTG + GKGF
Sbjct: 61 ANKPHKGHVAKAETTPKRFIKEFKDVELGD-YEVGSEIKVDIFQAGDIVDVTGTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH +HG S HRS GS G D +VFK K + G+ GG ++T++NLE+V
Sbjct: 120 QGAIKRHGQSRGPMSHG-SHYHRSPGSMGMASDASKVFKGKNLPGQTGGTQITIQNLEIV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD +R +IL+KG VPGAKK S + ++ + KSA
Sbjct: 179 KVDAERNVILIKGNVPGAKK-SMVTIKSAVKSA 210
>gi|158319543|ref|YP_001512050.1| ribosomal protein L3 [Alkaliphilus oremlandii OhILAs]
gi|189042830|sp|A8MLE0|RL3_ALKOO RecName: Full=50S ribosomal protein L3
gi|158139742|gb|ABW18054.1| ribosomal protein L3 [Alkaliphilus oremlandii OhILAs]
Length = 210
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 91/210 (43%), Positives = 126/210 (60%), Gaps = 3/210 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V RK+GMT +++ G IPVTV+ ++ V +T++K+GY A+QVG G+ +NV
Sbjct: 1 MKGLVGRKIGMTQMFDETGLVIPVTVIEVEANAVTQVKTIEKDGYNAIQVGYGQINERNV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP +G F V+PK+ L EFR++ + G F G VD++G++ GKGF
Sbjct: 61 NKPSKGHFDKAGVTPKRSLQEFRLESTEG-FTAGQELKADLFKAGDKVDISGVSKGKGFQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRHN HG S HR GS G P RVFK KK+AG MG VT++NLEVV
Sbjct: 120 GVIKRHNQSRGPMAHG-SRYHRGPGSMGAASYPSRVFKGKKLAGHMGHENVTIQNLEVVK 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
VD +R L++VKG VPG KK + + S K
Sbjct: 179 VDVERNLLIVKGAVPGPKKG-LLTINTSIK 207
>gi|271962632|ref|YP_003336828.1| 50S ribosomal protein L3P [Streptosporangium roseum DSM 43021]
gi|270505807|gb|ACZ84085.1| LSU ribosomal protein L3P [Streptosporangium roseum DSM 43021]
Length = 217
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 96/210 (45%), Positives = 132/210 (62%), Gaps = 2/210 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
GV+ +KLGMT V++ + R +PVTV+ C V RT +K+GY AVQ+G G+ + V+
Sbjct: 6 KGVLGKKLGMTQVFDADNRMVPVTVVEAGPCVVTRVRTPEKDGYSAVQLGFGQVDPRKVN 65
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP+ + +++P++ E R +D +G S F GQ VDVTG + GKGF+G
Sbjct: 66 KPLGDYLRKHDITPRRYFAEIR-TEDAGDYTLGQELSADTFEAGQFVDVTGKSKGKGFAG 124
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F GL A+HG HRS GS G PGRVFK +MAGRMG R TV++L+V +V
Sbjct: 125 VMKRHGFKGLSASHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNVRTTVQSLKVHAV 184
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
D ++GLIL+KG +PGA S +LVR + K
Sbjct: 185 DAEKGLILIKGAIPGA-NGSLVLVRTAAKK 213
>gi|254383172|ref|ZP_04998526.1| 50S ribosomal protein L3 [Streptomyces sp. Mg1]
gi|194342071|gb|EDX23037.1| 50S ribosomal protein L3 [Streptomyces sp. Mg1]
Length = 214
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 98/211 (46%), Positives = 129/211 (61%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
GV+ KLGMT V++ R +PVTV+ C V RT D +GY +VQ+ GE + V+
Sbjct: 6 KGVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTNDIDGYESVQIAFGEIDPRKVN 65
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G
Sbjct: 66 KPLKGHFAKADVTPRRHLVELRTS-DASEYTLGQEITAQVFESGVKVDVTGNSKGKGFAG 124
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRHNF GL A HGV HRS GS G PGRVFK +MAGRMG RVT +NL + +V
Sbjct: 125 VMKRHNFRGLGAGHGVQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIHAV 184
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D ++GL+L+KG VPG +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214
>gi|152980599|ref|YP_001355101.1| large subunit ribosomal protein L3 [Janthinobacterium sp.
Marseille]
gi|212288401|sp|A6T3K4|RL3_JANMA RecName: Full=50S ribosomal protein L3
gi|151280676|gb|ABR89086.1| large subunit ribosomal protein L3 [Janthinobacterium sp.
Marseille]
Length = 224
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 97/213 (45%), Positives = 126/213 (59%), Gaps = 2/213 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ RK+GM ++ +G IPVTVL + N +V +T + +GY AVQV G + V+K
Sbjct: 10 GLLGRKVGMMRIFTDDGDSIPVTVLDVSNNRVTQIKTSEVDGYSAVQVAFGSRRASRVNK 69
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQK-DDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
G F+ V L EFRV L VG V + S F VGQ VDV G+TIGKG++G
Sbjct: 70 ASAGHFAKAGVEAGTVLKEFRVAATAASELKVGDVIAASLFEVGQKVDVQGVTIGKGYAG 129
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KR+NFG RATHG S SH GS G QDPGRVF K+M G +G T +NLE+ +
Sbjct: 130 VIKRYNFGSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTRTTQNLEIARI 189
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D R L+LVKG VPGA KN ++V + K
Sbjct: 190 DADRQLLLVKGAVPGA-KNGQVIVSPAVKVKAK 221
>gi|304391453|ref|ZP_07373395.1| 50S ribosomal protein L3 [Ahrensia sp. R2A130]
gi|303295682|gb|EFL90040.1| 50S ribosomal protein L3 [Ahrensia sp. R2A130]
Length = 277
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 134/216 (62%), Positives = 170/216 (78%), Gaps = 2/216 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT +Y EG +PVTVL +++ QV+ RT +K+GY AVQ+GAG+AKVKN
Sbjct: 1 MRSGVIAQKVGMTRIYTDEGINVPVTVLRMEHVQVIAQRTEEKHGYTAVQLGAGKAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VSKPMRG F+ V PK+KL EFRV + ++L+PVG+ +++ GQ VDVTG TIGKGF
Sbjct: 61 VSKPMRGHFAVAKVEPKRKLAEFRVTE-ENLVPVGAEIIAAHYMPGQFVDVTGTTIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRHNFGGLRA+HGVS+SHRSHGSTG QDPG+VFK K+MAG MG RVT +N++VV
Sbjct: 120 AGAMKRHNFGGLRASHGVSVSHRSHGSTGQCQDPGKVFKGKRMAGHMGNTRVTTQNIQVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
SVD RGL+LVKG VPG K W+ +RD+ K V+
Sbjct: 180 SVDVDRGLVLVKGAVPGP-KGGWVTLRDAIKKPVHP 214
>gi|315925256|ref|ZP_07921470.1| 50S ribosomal protein L3 [Pseudoramibacter alactolyticus ATCC
23263]
gi|315621490|gb|EFV01457.1| 50S ribosomal protein L3 [Pseudoramibacter alactolyticus ATCC
23263]
Length = 211
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 86/213 (40%), Positives = 121/213 (56%), Gaps = 3/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++ +K+GMT ++ +G +PVTV+ C VV +TL+ +GY AVQ+ G+ K KN
Sbjct: 1 MKKAIIGKKIGMTQIFQEDGTVVPVTVVQAGPCTVVQKKTLENDGYEAVQLAYGDIKEKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V KP++G F V + L EFR+ D L G F G VDV+G + GKG+
Sbjct: 61 VVKPVKGHFDKYGVDYARTLREFRLD-DCASLEAGQKIKADVFEAGDKVDVSGKSKGKGY 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GA+KR HG S HRS GS G P RV K K +AG+MG VT NLE++
Sbjct: 120 AGAIKRWGQQRGPMAHG-SKYHRSAGSMGASAYPARVPKGKHLAGQMGNKNVTALNLEII 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD + L+L+KG VPG + + V+ S K+A
Sbjct: 179 QVDAENNLLLIKGAVPGP-RGGVVSVKSSVKAA 210
>gi|170748636|ref|YP_001754896.1| 50S ribosomal protein L3 [Methylobacterium radiotolerans JCM 2831]
gi|226730535|sp|B1LWS6|RL3_METRJ RecName: Full=50S ribosomal protein L3
gi|170655158|gb|ACB24213.1| ribosomal protein L3 [Methylobacterium radiotolerans JCM 2831]
Length = 241
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 132/216 (61%), Positives = 159/216 (73%), Gaps = 2/216 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT V+ G +PVTVL +D CQVV HRT++KNGY+A+QVG G+AKVKN
Sbjct: 1 MRSGVIAQKVGMTRVFTDAGEHVPVTVLKIDQCQVVAHRTVEKNGYVALQVGVGKAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VS RG F+ V PKKKL EFRV + D L+PVG+ + +F GQ VDVTG T GKGF
Sbjct: 61 VSAAERGRFAVAKVEPKKKLAEFRVTE-DALIPVGAEITADHFIPGQFVDVTGTTTGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR NFGGLRATHGVSISHRS GSTG RQDPG+ FKNKKM G +G RVT +NL VV
Sbjct: 120 AGGIKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTFKNKKMPGHLGVERVTTQNLRVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
D +RGLILV+G VPG WI +RD+ K +
Sbjct: 180 RTDPERGLILVEGAVPGVA-GGWIQIRDAVKRKLPA 214
>gi|224110272|ref|XP_002315468.1| predicted protein [Populus trichocarpa]
gi|222864508|gb|EEF01639.1| predicted protein [Populus trichocarpa]
Length = 320
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 106/209 (50%), Positives = 143/209 (68%), Gaps = 2/209 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+GV+A K GMT +++ G RIP+TVL +D+ V +T++K G+ A+QVG G+ K K++
Sbjct: 74 RTGVIAVKCGMTALWDKWGARIPITVLWVDDNIVSQVKTVEKEGFFALQVGCGQKKEKHL 133
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F + V K+KL EF V ++ LLPVG+ +F GQ VDV G+T+GKGF
Sbjct: 134 TKPEVGHFRAQGVPMKRKLREFPVTENA-LLPVGTCIGVRHFVPGQFVDVAGITMGKGFQ 192
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRH F G A+HG S+SHRS GSTG R PG+VFK KKM GRMGG + TVKN+ V
Sbjct: 193 GGMKRHGFKGGPASHGASLSHRSIGSTGQRDAPGKVFKGKKMPGRMGGVQRTVKNVWVYK 252
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
+D R L+ VKG VPGA+ N ++ ++DS
Sbjct: 253 IDPARNLMWVKGQVPGAEGN-FVFIKDSV 280
>gi|299135257|ref|ZP_07028448.1| 50S ribosomal protein L3 [Afipia sp. 1NLS2]
gi|298590234|gb|EFI50438.1| 50S ribosomal protein L3 [Afipia sp. 1NLS2]
Length = 243
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 127/218 (58%), Positives = 157/218 (72%), Gaps = 2/218 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT V+ G IPVTVL L NCQVV HRT DKNGY A+Q+G+G K
Sbjct: 1 MRSGVIAQKVGMTRVFTEAGEHIPVTVLKLGNCQVVGHRTKDKNGYTALQLGSGARKSVY 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+ K RG F+ V PK+K+ EFRV DD ++PVG+ + +F GQ VDVTG ++GKGF
Sbjct: 61 MPKAERGQFAVAKVEPKRKVVEFRVS-DDAVIPVGAEITADHFVAGQFVDVTGTSVGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR NFGGLRATHGVS+SHRS GSTG RQDPG+ FKNKKM G MG +R+T NL VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
D +RGL+LV+G VPG+ K WI VRD+ K + +
Sbjct: 180 QTDVERGLLLVEGAVPGS-KGGWITVRDAVKKPLPKEA 216
>gi|299768666|ref|YP_003730692.1| 50S ribosomal protein L3 [Acinetobacter sp. DR1]
gi|298698754|gb|ADI89319.1| 50S ribosomal protein L3 [Acinetobacter sp. DR1]
Length = 212
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 96/213 (45%), Positives = 135/213 (63%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK GMT ++ G +PVTV+ +D ++ +TL+ +GY AVQV GE +
Sbjct: 1 MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+ +G F+ V+ + + EFRV + + + VG FTVGQ+VDVTG + GKG
Sbjct: 61 VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQVVDVTGQSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KR NF ATHG S+SHR GSTG Q PGRVFK KKMAG +G RVTV+ LE+
Sbjct: 121 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VS+D +R +++VKG +PG+ ++VR + K+
Sbjct: 181 VSIDAERSVLVVKGAIPGS-TGGDVIVRPTIKA 212
>gi|296113797|ref|YP_003627735.1| 50S ribosomal protein L3 [Moraxella catarrhalis RH4]
gi|295921491|gb|ADG61842.1| 50S ribosomal protein L3 [Moraxella catarrhalis RH4]
gi|326562142|gb|EGE12470.1| 50S ribosomal protein L3 [Moraxella catarrhalis 7169]
gi|326564493|gb|EGE14719.1| 50S ribosomal protein L3 [Moraxella catarrhalis 46P47B1]
gi|326565676|gb|EGE15839.1| 50S ribosomal protein L3 [Moraxella catarrhalis 12P80B1]
gi|326566245|gb|EGE16397.1| 50S ribosomal protein L3 [Moraxella catarrhalis 103P14B1]
gi|326567103|gb|EGE17225.1| 50S ribosomal protein L3 [Moraxella catarrhalis BC1]
gi|326568367|gb|EGE18447.1| 50S ribosomal protein L3 [Moraxella catarrhalis BC7]
gi|326572268|gb|EGE22263.1| 50S ribosomal protein L3 [Moraxella catarrhalis BC8]
gi|326574610|gb|EGE24550.1| 50S ribosomal protein L3 [Moraxella catarrhalis O35E]
gi|326574866|gb|EGE24796.1| 50S ribosomal protein L3 [Moraxella catarrhalis 101P30B1]
gi|326576190|gb|EGE26105.1| 50S ribosomal protein L3 [Moraxella catarrhalis CO72]
Length = 212
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 98/213 (46%), Positives = 137/213 (64%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V +K GMT V+ G IPVTV+ +D ++ +T+D +GY A+Q+ GE +
Sbjct: 1 MAIGLVGKKCGMTRVFTEAGVSIPVTVVEVDANRISQIKTVDTDGYNAIQITTGERRDSR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+ +G F+ V+ + ++EFR ++ D + +G F VGQLVDVTG + GKG
Sbjct: 61 VTAAQKGHFAKAGVAAGRGVWEFRAEESDLEGREIGGNILADIFEVGQLVDVTGQSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KRHNF ATHG S+SHR GSTG Q PGRVFK KKM G+MG RVTV+ LE+
Sbjct: 121 FQGGVKRHNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMPGQMGNKRVTVQGLEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VSVD ++G++++KG VPGA ++VR S K+
Sbjct: 181 VSVDAEKGVLVIKGAVPGA-NGGDVIVRPSVKA 212
>gi|294630893|ref|ZP_06709453.1| 50S ribosomal protein L3 [Streptomyces sp. e14]
gi|292834226|gb|EFF92575.1| 50S ribosomal protein L3 [Streptomyces sp. e14]
Length = 214
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 97/211 (45%), Positives = 128/211 (60%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT V++ R +PVTV+ V RT D +GY +VQ+ GE + V+
Sbjct: 6 KGILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVN 65
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G
Sbjct: 66 KPLKGHFAKADVTPRRHLVEIR-TADAAEYTLGQEITAEVFEAGVKVDVTGKSKGKGFAG 124
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRHNFGGL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +V
Sbjct: 125 VMKRHNFGGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D ++GL+L+KG VPG +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214
>gi|254391393|ref|ZP_05006596.1| 50S ribosomal protein L3 [Streptomyces clavuligerus ATCC 27064]
gi|294814467|ref|ZP_06773110.1| 50S ribosomal protein L3 [Streptomyces clavuligerus ATCC 27064]
gi|326442856|ref|ZP_08217590.1| 50S ribosomal protein L3 [Streptomyces clavuligerus ATCC 27064]
gi|197705083|gb|EDY50895.1| 50S ribosomal protein L3 [Streptomyces clavuligerus ATCC 27064]
gi|294327066|gb|EFG08709.1| 50S ribosomal protein L3 [Streptomyces clavuligerus ATCC 27064]
Length = 214
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 98/211 (46%), Positives = 129/211 (61%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
GV+ KLGMT V++ R +PVTV+ C V RT D +GY +VQ+ GE + V+
Sbjct: 6 KGVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTNDVDGYESVQIAFGEIDPRKVN 65
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP++G F+ +V+P++ L E R D +G + + F G VDVTG + GKGF+G
Sbjct: 66 KPLKGHFAKADVTPRRHLVELRTS-DASEYTLGQEITAAVFESGVKVDVTGKSKGKGFAG 124
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRHNF GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +V
Sbjct: 125 VMKRHNFRGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D ++GL+L+KG VPG +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214
>gi|227549826|ref|ZP_03979875.1| 50S ribosomal protein L3 [Corynebacterium lipophiloflavum DSM
44291]
gi|227078081|gb|EEI16044.1| 50S ribosomal protein L3 [Corynebacterium lipophiloflavum DSM
44291]
Length = 218
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 87/214 (40%), Positives = 122/214 (57%), Gaps = 2/214 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT +++ + R IPVTV+ V RT + +GY A+Q+ G+ +
Sbjct: 7 KGILGTKLGMTQIFDEDNRVIPVTVVEAGPVVVTQIRTAETDGYSAIQIAYGDIDPRKTK 66
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP G F V+P++ + E R+ D VG F+ + F VDV G T GKG++G
Sbjct: 67 KPQAGHFKKAGVNPRRHVAEIRMD-DTSAYEVGQEFNATIFDGDTYVDVVGTTKGKGYAG 125
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
AMKRH F G A+HG +HR GS G PGRVFK +MAGRMG NRVT +NL++ +
Sbjct: 126 AMKRHGFAGQGASHGNQAAHRRVGSIGACATPGRVFKGTRMAGRMGSNRVTTQNLKIQRI 185
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
D LIL+KG +PG K S + V+ + K +
Sbjct: 186 DGDNNLILIKGAIPG-VKGSIVTVKTAVKGGAHA 218
>gi|291166879|gb|EFE28925.1| 50S ribosomal protein L3 [Filifactor alocis ATCC 35896]
Length = 210
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 86/208 (41%), Positives = 126/208 (60%), Gaps = 2/208 (0%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ +K+GMT +++ G IPVTV+ V +T + +GY AVQVG GE K K+V+KP
Sbjct: 4 IMGKKIGMTQIFDENGVMIPVTVVEAGPVVVTQIKTEETDGYNAVQVGFGEVKEKHVNKP 63
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
M+G F+ V+ KK + E R + + + F VG+ +DVTG++ GKGF G++
Sbjct: 64 MKGHFAKAGVALKKHVKELRPEDGVENYSLAQEIKVDIFEVGEKIDVTGISKGKGFQGSI 123
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KRH THG S HR+ GS G DP +V K KK+ G MG RVT++NLEV VD
Sbjct: 124 KRHGQSRGPETHG-SHYHRAPGSMGSASDPSKVRKGKKLPGHMGHTRVTIQNLEVARVDA 182
Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212
++ LIL+KG +PG KK ++++ + K
Sbjct: 183 EKNLILIKGAIPGPKKG-LVVIKTAVKG 209
>gi|290958151|ref|YP_003489333.1| 50S ribosomal protein L3 [Streptomyces scabiei 87.22]
gi|260647677|emb|CBG70782.1| 50S ribosomal protein L3 [Streptomyces scabiei 87.22]
Length = 214
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 97/211 (45%), Positives = 127/211 (60%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT V++ R +PVTV+ V RT D +GY +VQ+ GE + V+
Sbjct: 6 KGILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVN 65
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP++G F+ +V+P++ L E R D +G S F G VDVTG + GKGF+G
Sbjct: 66 KPLKGHFAKADVTPRRHLVEIR-TADASEYTLGQEISAEVFEAGVKVDVTGKSKGKGFAG 124
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRHNF GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +V
Sbjct: 125 VMKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D ++GL+L+KG VPG +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214
>gi|254517470|ref|ZP_05129526.1| ribosomal protein L3 [Clostridium sp. 7_2_43FAA]
gi|226911219|gb|EEH96420.1| ribosomal protein L3 [Clostridium sp. 7_2_43FAA]
Length = 209
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 89/212 (41%), Positives = 130/212 (61%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++ +K+GMT +++ G+ +PVTV+ C VV +T++K+GY A+QVG G+ + K
Sbjct: 1 MKKAILGKKIGMTQIFDANGKVVPVTVVEAGPCVVVQKKTIEKDGYEAIQVGFGDVREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP +G ++ VS K+KL EFR+ +D VG F G +DV+G++ GKGF
Sbjct: 61 VNKPKKGHYAKAGVSLKRKLKEFRL-EDCSAYEVGQEIKADLFEAGDKIDVSGVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR N THG S HR+ GS G DP R FKNK M G MG TV NLEVV
Sbjct: 120 QGVIKRWNANRGPMTHG-SKFHRAVGSMGASSDPSRTFKNKNMPGHMGAVNTTVLNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V ++ LIL+KG +PG K + + +R++ K+
Sbjct: 179 KVIAEKNLILIKGGIPGPNKGTVV-IRNAVKA 209
>gi|170757219|ref|YP_001783121.1| 50S ribosomal protein L3 [Clostridium botulinum B1 str. Okra]
gi|226725153|sp|B1IGF4|RL3_CLOBK RecName: Full=50S ribosomal protein L3
gi|169122431|gb|ACA46267.1| 50S ribosomal protein L3 [Clostridium botulinum B1 str. Okra]
Length = 209
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 85/212 (40%), Positives = 131/212 (61%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++ +KLGMT ++N G+ IPVTV+ C V+ +T++K+GY A+QV G+ + K
Sbjct: 1 MKKAILGKKLGMTQIFNENGKVIPVTVIEAGPCTVIQKKTVEKDGYEAIQVAFGDIREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP++G F+ VS K+ + EF++ +D + L +G F G+ VD++G++ GKGF
Sbjct: 61 RNKPVKGHFAKAGVSVKRHIKEFKL-EDSNSLEIGQEIKADVFEAGERVDISGVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G ++R N +HG S HR+ GS G DP R FKNK+M G MG TV NLEVV
Sbjct: 120 QGTIRRWNAHRGPMSHG-SKFHRAVGSMGASSDPSRTFKNKRMPGHMGNVNTTVLNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+ ++ LIL+KG VPG K + +R++ K+
Sbjct: 179 KIIPEKNLILIKGGVPGPNKG-LVQIRNTVKA 209
>gi|294496983|ref|YP_003560683.1| 50S ribosomal protein L3 [Bacillus megaterium QM B1551]
gi|294496985|ref|YP_003560685.1| 50S ribosomal protein L3 [Bacillus megaterium QM B1551]
gi|295702350|ref|YP_003595425.1| 50S ribosomal protein L3 [Bacillus megaterium DSM 319]
gi|294346920|gb|ADE67249.1| 50S ribosomal protein L3 [Bacillus megaterium QM B1551]
gi|294346922|gb|ADE67251.1| 50S ribosomal protein L3 [Bacillus megaterium QM B1551]
gi|294800009|gb|ADF37075.1| 50S ribosomal protein L3 [Bacillus megaterium DSM 319]
Length = 209
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 89/213 (41%), Positives = 124/213 (58%), Gaps = 4/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ G IPVTV+ V+ + + +GY A+Q+G + + K
Sbjct: 1 MAKGILGRKIGMTQVFAENGDLIPVTVIEASANVVLQVKNAETDGYEAIQLGFEDIREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + E R D VG F G ++DVTG++ GKGF
Sbjct: 61 SNKPAKGHATKANTAPKRFIRELRGV-DASAYEVGQEVKVDIFAEGDVIDVTGISKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH +HG S HR GS G P RVFK K + GRMGG R+TV+NL +V
Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKLLPGRMGGERITVQNLSIV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD +R L+LVKG VPGA+K S + V+ + KS
Sbjct: 178 KVDAERNLLLVKGNVPGARK-SLVTVKSAVKSK 209
>gi|222085675|ref|YP_002544205.1| 50S ribosomal protein L3 [Agrobacterium radiobacter K84]
gi|221723123|gb|ACM26279.1| 50S ribosomal protein L3 [Agrobacterium radiobacter K84]
Length = 219
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 147/215 (68%), Positives = 174/215 (80%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT VYN G +PVTVL ++ CQVV RT++KNGY AVQ+GAG+AKVKN
Sbjct: 7 MRSGVIAQKVGMTRVYNDAGEHVPVTVLRMEGCQVVAQRTVEKNGYTAVQLGAGQAKVKN 66
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SK +RG F+ +V PK KL EFRV DD+LL VG+ ++F+ GQLVDVTG TIGKGF
Sbjct: 67 TSKALRGHFAVASVEPKAKLVEFRVS-DDNLLEVGTEIKAAHFSAGQLVDVTGTTIGKGF 125
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRH FGGLRATHGVS+SHRSHGSTG RQDPG+VFKNKKMAG MG RVT +NLEVV
Sbjct: 126 AGAMKRHGFGGLRATHGVSVSHRSHGSTGSRQDPGKVFKNKKMAGHMGQTRVTTQNLEVV 185
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
S D+ RGLILVKG VPG+ K +WI+VRD+ KSA
Sbjct: 186 STDEDRGLILVKGAVPGS-KGAWIIVRDAVKSAAK 219
>gi|309379159|emb|CBX22290.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 214
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 103/212 (48%), Positives = 132/212 (62%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K
Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDD-LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+K G F+ V EF + ++ L G + S F VGQLVDVTG + GKG
Sbjct: 61 VNKAEAGHFAKAGVEGGSGSIEFALTEEKPVELKAGDEITVSMFEVGQLVDVTGTSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEV
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGTTKATVQKLEV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
V VD +R L+LVKG VPGA NS ++VR S K
Sbjct: 181 VRVDAERQLLLVKGAVPGAV-NSDVVVRPSVK 211
>gi|222148366|ref|YP_002549323.1| 50S ribosomal protein L3 [Agrobacterium vitis S4]
gi|254803647|sp|B9JVN7|RL3_AGRVS RecName: Full=50S ribosomal protein L3
gi|221735354|gb|ACM36317.1| 50S ribosomal protein L3 [Agrobacterium vitis S4]
Length = 213
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 148/215 (68%), Positives = 173/215 (80%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT VYN G +PVTVL LDNCQV+ RT+DK+GY AVQ+GAG+AKVKN
Sbjct: 1 MRSGVIAQKVGMTRVYNDAGEHVPVTVLRLDNCQVLAQRTVDKHGYTAVQLGAGQAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SK MRG F++ NV PK KL EFRV + D+L+ VGS +F GQLVDVTG TIGKGF
Sbjct: 61 TSKAMRGNFAAANVEPKAKLVEFRVSE-DNLMDVGSELKAGHFEAGQLVDVTGTTIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRHNFGGLRATHGVS+SHRSHGSTG QDPG+V+K K+MAG MG RVT +NLEVV
Sbjct: 120 AGAMKRHNFGGLRATHGVSVSHRSHGSTGSNQDPGKVWKGKRMAGHMGQTRVTTQNLEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
S D+ RGLILVKG VPG+ K SWI+VRD+ KSA
Sbjct: 180 STDEDRGLILVKGAVPGS-KGSWIIVRDAVKSAAK 213
>gi|255556584|ref|XP_002519326.1| 50S ribosomal protein L3, putative [Ricinus communis]
gi|223541641|gb|EEF43190.1| 50S ribosomal protein L3, putative [Ricinus communis]
Length = 311
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 102/212 (48%), Positives = 143/212 (67%), Gaps = 2/212 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+G++A K GMT +++ G R+P+TVL +D+ V +T++K G A+Q+G G K K++
Sbjct: 65 RTGIIALKCGMTALWDKWGERVPITVLWVDDNIVTQVKTVEKEGIFALQIGYGHKKAKHL 124
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F + NV K+KL EF V + D L+PVG+ +F GQ VD+TG+T GKGF
Sbjct: 125 TKPEVGHFRAHNVPLKRKLREFPVTE-DALIPVGTSLGVRHFVPGQFVDITGITRGKGFQ 183
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRH F G+ ATHG S+SHRS GSTG R PG+VFK KKM GRMGG + TVKN+ V
Sbjct: 184 GGMKRHGFKGMPATHGASLSHRSGGSTGQRDAPGKVFKGKKMPGRMGGVQRTVKNVWVYK 243
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+D R ++ V+G VPGA+ N ++ ++D+
Sbjct: 244 IDPTRNMMWVRGQVPGAEGN-FVFIKDAVYKK 274
>gi|257054470|ref|YP_003132302.1| 50S ribosomal protein L3P [Saccharomonospora viridis DSM 43017]
gi|256584342|gb|ACU95475.1| LSU ribosomal protein L3P [Saccharomonospora viridis DSM 43017]
Length = 213
Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats.
Identities = 92/213 (43%), Positives = 123/213 (57%), Gaps = 2/213 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ KLGMT V++ R +PVTV+ V R+ +K+GY AVQ+ G + V
Sbjct: 1 MKGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTQVRSKEKDGYSAVQLAFGNIDPRRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F V+P++ L E R D D VG + F+ G +VDVTG + GKGF+
Sbjct: 61 NKPQAGHFEKAGVTPRRYLAELRTS-DADSYEVGQEITADVFSDGAVVDVTGTSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRH F G A+HG +HR+ GS G PGRVFK K+MAGR G RVT + L + S
Sbjct: 120 GVMKRHGFAGQGASHGNQATHRAPGSIGGAATPGRVFKGKRMAGRAGNKRVTTQGLTIHS 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V + GL+L+KG VPG K + VR + K V
Sbjct: 180 VRAEEGLLLIKGAVPGP-KGGLVFVRSAAKGGV 211
>gi|205372069|ref|ZP_03224886.1| 50S ribosomal protein L3 [Bacillus coahuilensis m4-4]
Length = 209
Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats.
Identities = 90/212 (42%), Positives = 124/212 (58%), Gaps = 4/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ G IPVTV+ V+ +T D +GY A+Q+G + + K
Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEATPNVVLQKKTADTDGYSAIQLGFEDMRAKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP G + +PK+ + E R + VG F G +VDVTG++ GKGF
Sbjct: 61 ANKPRTGHAAKAETAPKRFIREIR-DANVAEYEVGQEVKVDTFAAGDVVDVTGVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH +HG S HR GS G P RVFK K + GRMGG+ VTV+NLE+V
Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKLLPGRMGGDIVTVQNLEIV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPGAKK + + V+ + K+
Sbjct: 178 KVDVERNLLLVKGNVPGAKK-ALVKVQSAVKA 208
>gi|18146071|dbj|BAB82111.1| 50S ribosomal protein L3 [Clostridium perfringens str. 13]
Length = 216
Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats.
Identities = 89/212 (41%), Positives = 130/212 (61%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++ +K+GMT +++ GR IPVTV+ C VV +T++ +GY A+QVG GE + K
Sbjct: 8 MKKAIIGKKVGMTQIFDENGRVIPVTVVEAGPCVVVQKKTVETDGYDAIQVGFGELREKL 67
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP +G F+ VS ++ L EFR+ +D VG F +G VDV+G++ GKGF
Sbjct: 68 VNKPRKGHFAKAGVSLRRTLKEFRM-EDVANYNVGDEIKVDTFEIGDKVDVSGVSKGKGF 126
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR N +HG S HR+ GS G DP R FKNK+M G MG TV NLEVV
Sbjct: 127 QGTIKRWNASRGPMSHG-SKFHRAPGSMGAASDPSRTFKNKRMPGHMGAKNTTVLNLEVV 185
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+ ++ +IL+KG +PG K + + +R+S K+
Sbjct: 186 KIMPEKNIILIKGGIPGPNKGTVV-IRNSVKA 216
>gi|288917230|ref|ZP_06411599.1| ribosomal protein L3 [Frankia sp. EUN1f]
gi|288351421|gb|EFC85629.1| ribosomal protein L3 [Frankia sp. EUN1f]
Length = 237
Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats.
Identities = 95/212 (44%), Positives = 124/212 (58%), Gaps = 2/212 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ KLGMT V++ R +PVTV+ V +T D +GY AVQ+G GE + ++K
Sbjct: 8 GLLGTKLGMTQVWDANNRVVPVTVIQAGPNVVTQVKTTDNDGYSAVQLGFGEIDPRRINK 67
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P+RG F + V+P++ L E R D G + F GQ+VDVTG + GKGF+G
Sbjct: 68 PLRGHFETSGVTPRRHLVELR-TADAGNYRAGQELTGELFDAGQVVDVTGTSKGKGFAGV 126
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
MKRH F GL A HGV HRS GS G PGRVFK +MAGRMG RVTV L + +VD
Sbjct: 127 MKRHGFKGLGAGHGVERKHRSPGSVGGCATPGRVFKGLRMAGRMGHARVTVAGLTIHAVD 186
Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
+RG +L+KG VPG + VR + K
Sbjct: 187 TERGFLLIKGAVPGPD-GGLVFVRSAAKRPAP 217
>gi|152973956|ref|YP_001373473.1| 50S ribosomal protein L3 [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|189042831|sp|A7GK20|RL3_BACCN RecName: Full=50S ribosomal protein L3
gi|152022708|gb|ABS20478.1| ribosomal protein L3 [Bacillus cytotoxicus NVH 391-98]
Length = 210
Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats.
Identities = 92/214 (42%), Positives = 133/214 (62%), Gaps = 4/214 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+Q+G + + K
Sbjct: 1 MTKGILGRKIGMTQVFAENGELIPVTVIEATPNVVLQKKTTETDGYNAIQLGFEDKREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + + +PK+ + E R D D L VG F G+ VDVTG++ GKGF
Sbjct: 61 ANKPEQGHVAKASTAPKRFIREIR-DADVDGLEVGQEVKVEVFAAGETVDVTGISKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH +HG S HR GS G P RVFK KK+AGRMGG+++T++NLE+V
Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKKLAGRMGGDQITIQNLEIV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VD +R L+L+KG VPGAKK S ++V+ + K++
Sbjct: 178 QVDVERNLLLIKGNVPGAKK-SLVVVQGAVKASK 210
>gi|307328030|ref|ZP_07607211.1| 50S ribosomal protein L3 [Streptomyces violaceusniger Tu 4113]
gi|306886335|gb|EFN17340.1| 50S ribosomal protein L3 [Streptomyces violaceusniger Tu 4113]
Length = 214
Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats.
Identities = 97/211 (45%), Positives = 126/211 (59%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
GV+ KLGMT V++ R +PVTV+ C V RT D +GY AVQ+ GE + V+
Sbjct: 6 KGVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTDDADGYSAVQIAFGEIDPRKVN 65
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP++G F+ +V+P++ L E R D +G + F G VDVTG + GKG +G
Sbjct: 66 KPLKGHFAKADVTPRRHLVELRTT-DAGEYTLGQEVTAEVFESGVRVDVTGTSKGKGTAG 124
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +V
Sbjct: 125 VMKRHGFAGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D ++GL+L+KG VPG +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214
>gi|295838404|ref|ZP_06825337.1| 50S ribosomal protein L3 [Streptomyces sp. SPB74]
gi|302519661|ref|ZP_07272003.1| 50S ribosomal protein L3 [Streptomyces sp. SPB78]
gi|318058128|ref|ZP_07976851.1| 50S ribosomal protein L3 [Streptomyces sp. SA3_actG]
gi|318076019|ref|ZP_07983351.1| 50S ribosomal protein L3 [Streptomyces sp. SA3_actF]
gi|197695799|gb|EDY42732.1| 50S ribosomal protein L3 [Streptomyces sp. SPB74]
gi|302428556|gb|EFL00372.1| 50S ribosomal protein L3 [Streptomyces sp. SPB78]
Length = 214
Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats.
Identities = 97/211 (45%), Positives = 128/211 (60%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT V++ R +PVTV+ C V RT D +GY +VQ+ GE + V+
Sbjct: 6 KGILGEKLGMTQVWDDNNRVVPVTVVKAGPCVVTQVRTNDSDGYESVQIAFGEIDPRKVN 65
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G
Sbjct: 66 KPLKGHFAKADVTPRRHLVEIRTS-DSSEYTLGQEVTAETFESGVKVDVTGKSKGKGFAG 124
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRHNF GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +V
Sbjct: 125 VMKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D ++GL+L+KG VPG +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214
>gi|300775014|ref|ZP_07084877.1| 50S ribosomal protein L3 [Chryseobacterium gleum ATCC 35910]
gi|300506829|gb|EFK37964.1| 50S ribosomal protein L3 [Chryseobacterium gleum ATCC 35910]
Length = 208
Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats.
Identities = 98/208 (47%), Positives = 135/208 (64%), Gaps = 3/208 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT ++N EG+ IP TV+ C V+ RTL+K+GY AVQ+G + KNV
Sbjct: 1 MSGIIGKKIGMTSLFNEEGKNIPCTVIQAGPCSVLQVRTLEKDGYKAVQLGFDDKSEKNV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
K + G F +PK KL EF + D+ + VG F G+ VDVTG + GKGF
Sbjct: 61 GKALAGHFKKAGSAPKAKLVEFYREFVDE-VKVGEEVKVDLFAEGEYVDVTGTSKGKGFQ 119
Query: 122 GAMKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH F G ++ATHG R+ GS G DP RVFK +MAGRMGG +VTV+NL+V+
Sbjct: 120 GVVKRHGFGGVMQATHGQHNRLRAPGSIGAGSDPSRVFKGMRMAGRMGGKQVTVQNLQVL 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
VD ++ L++VKG VPGA KNS++++R
Sbjct: 180 KVDQEQNLLVVKGAVPGA-KNSYVIIRK 206
>gi|237739366|ref|ZP_04569847.1| LSU ribosomal protein L3P [Fusobacterium sp. 2_1_31]
gi|229422974|gb|EEO38021.1| LSU ribosomal protein L3P [Fusobacterium sp. 2_1_31]
Length = 211
Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats.
Identities = 89/213 (41%), Positives = 134/213 (62%), Gaps = 3/213 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT ++ +G+ +PVTV+ V+ +T +K+GY+A+Q+G E K KN
Sbjct: 1 MSGILGKKIGMTQIF-EDGKFVPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNT 59
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+ G F+ V P++ + E V+ + +G VD+TG + GKG S
Sbjct: 60 TKPLMGIFNKAGVKPQRFVRELAVESVEG-YELGQEIKVDVLAEVGYVDITGTSKGKGTS 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRH FGG RA+HGVS +HR GS G PG+V K K+MAG+ G VTV+NL+VV
Sbjct: 119 GVMKRHGFGGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKRMAGQHGNATVTVQNLKVVK 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VD + L+L+KG VPGA KNS+++++ + K +
Sbjct: 179 VDVEHNLLLIKGAVPGA-KNSYLVIKPAVKKVI 210
>gi|323703548|ref|ZP_08115194.1| 50S ribosomal protein L3 [Desulfotomaculum nigrificans DSM 574]
gi|323531539|gb|EGB21432.1| 50S ribosomal protein L3 [Desulfotomaculum nigrificans DSM 574]
Length = 209
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 86/213 (40%), Positives = 123/213 (57%), Gaps = 4/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++N EG IPVTV+ C VV +T++ +GY A+Q+G GE +
Sbjct: 1 MPVGILGKKVGMTQIFNKEGIAIPVTVVEAGPCVVVQKKTVETDGYNAIQLGFGEKREAL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP +G + V P + L E RV +D + VG F GQ VDV G + G+GF
Sbjct: 61 INKPTKGHLAKAGVRPVRFLRELRV-EDPNAYEVGQEIKADIFNEGQKVDVVGTSKGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KRHNF HG R S + P R FK +K+ G G RVTV+NLEVV
Sbjct: 120 AGGIKRHNFHRGPMAHGSKYHRRPGSSAA--KGPARTFKGRKLPGHYGVERVTVQNLEVV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD +R L+ +KG VPG + +LV++S K+
Sbjct: 178 KVDPERNLLAIKGAVPGP-RGGLLLVKNSVKAK 209
>gi|194017514|ref|ZP_03056125.1| ribosomal protein L3 [Bacillus pumilus ATCC 7061]
gi|194010786|gb|EDW20357.1| ribosomal protein L3 [Bacillus pumilus ATCC 7061]
Length = 209
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 93/213 (43%), Positives = 126/213 (59%), Gaps = 4/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ G IPVTV+ V+ +T D +GY A+Q+G + + K
Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVVEAAANVVLQKKTADTDGYEAIQIGFDDKREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + +PK+ + E R + D VG F G +VDVTG + GKGF
Sbjct: 61 SNKPEKGHVAKAETAPKRFVKELRGAELDA-YEVGQEVKVDIFANGDIVDVTGTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH THG S HR GS G DP RVFK K + GRMGG ++TV+NLE+V
Sbjct: 120 QGAIKRHGQSRGPMTHG-SRYHRRPGSMGPV-DPNRVFKGKLLPGRMGGEQITVQNLEIV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD +R L+L+KG VPGAKK S + V+ + KS
Sbjct: 178 KVDAERNLLLIKGNVPGAKK-SLVTVKSAVKSK 209
>gi|160872579|ref|ZP_02062711.1| ribosomal protein L3 [Rickettsiella grylli]
gi|159121378|gb|EDP46716.1| ribosomal protein L3 [Rickettsiella grylli]
Length = 223
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 86/220 (39%), Positives = 128/220 (58%), Gaps = 6/220 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK GMT +Y G IPVT++ + +VV +T +++GY ++QV G+
Sbjct: 1 MTMGLIGRKCGMTQLYAENGTVIPVTLIEIQPNRVVQIKTKERDGYESIQVTTGKKLSSR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSY-----FTVGQLVDVTGMT 115
++K G F+ V P L+E R+ ++D G F +G VDVTG
Sbjct: 61 LNKAEAGHFAKAAVEPGINLWELRITEEDHEFLKGISLGMEMTIDKLFKLGTYVDVTGTN 120
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKGF+G +KR++F ATHG S+SHR+ GS G RQ PGRVFK KKM G++G R TV+
Sbjct: 121 KGKGFAGVVKRYHFSTQDATHGNSLSHRAPGSIGQRQSPGRVFKGKKMCGQLGNRRCTVQ 180
Query: 176 NLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
+LE+V +D +R L+ +KG VPGA ++V+ + +
Sbjct: 181 SLEIVRIDTERHLLHIKGAVPGAP-GGQVIVKQAVRKKNK 219
>gi|260549840|ref|ZP_05824056.1| 50S ribosomal protein L3 [Acinetobacter sp. RUH2624]
gi|260407090|gb|EEX00567.1| 50S ribosomal protein L3 [Acinetobacter sp. RUH2624]
Length = 214
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 97/213 (45%), Positives = 135/213 (63%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK GMT ++ G +PVTV+ +D ++ +TL+ +GY AVQV GE +
Sbjct: 3 MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 62
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+ +G F+ V+ + + EFRV + + + VG FTVGQ+VDVTG + GKG
Sbjct: 63 VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQIVDVTGQSKGKG 122
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KR NF ATHG S+SHR GSTG Q PGRVFK KKMAG +G RVTV+ LE+
Sbjct: 123 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 182
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VS+D +R +++VKG +PGA ++VR + K+
Sbjct: 183 VSIDAERSVLVVKGAIPGA-TGGDVIVRPTIKA 214
>gi|189424410|ref|YP_001951587.1| 50S ribosomal protein L3 [Geobacter lovleyi SZ]
gi|226725181|sp|B3E7T5|RL3_GEOLS RecName: Full=50S ribosomal protein L3
gi|189420669|gb|ACD95067.1| ribosomal protein L3 [Geobacter lovleyi SZ]
Length = 211
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 91/214 (42%), Positives = 131/214 (61%), Gaps = 3/214 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGMT ++ +G R+PVTV+ C V+ +T + +GY AVQVG
Sbjct: 1 MNKGIIGKKLGMTQIFLEDGTRVPVTVVQAGPCVVLQKKTAEVDGYSAVQVGFETVNAAK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+ RG + L E +++++ + L +G + F G L+DVTG +IGKGF
Sbjct: 61 ANSADRGHCVKAGKGVFRHLRELKLEQEAE-LNIGDELTVQQFEPGDLIDVTGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRHNF G RA+HG S HR+ GS GC P RVFKNKKM G+MG RVTV+ L+VV
Sbjct: 120 QGVIKRHNFKGGRASHG-SRFHRAPGSIGCSATPSRVFKNKKMPGQMGNERVTVQRLQVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VD + LIL+KG +P + KN+ ++++DS K+
Sbjct: 179 RVDADQNLILIKGAIPDS-KNNVVVIKDSVKATK 211
>gi|322807806|emb|CBZ05381.1| LSU ribosomal protein L3p (L3e) [Clostridium botulinum H04402 065]
Length = 209
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 85/212 (40%), Positives = 131/212 (61%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++ +KLGMT ++N G+ IPVTV+ C V+ +T++K+GY A+QV G+ + K
Sbjct: 1 MKKAILGKKLGMTQIFNENGKVIPVTVIEAGPCTVIQKKTVEKDGYEAIQVAFGDIREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP++G F+ VS K+ + EF++ +D + L +G F G+ VD++G++ GKGF
Sbjct: 61 RNKPVKGHFAKAGVSVKRHIKEFKL-EDSNSLKIGQEIKADIFEAGERVDISGVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G ++R N +HG S HR+ GS G DP R FKNK+M G MG TV NLEVV
Sbjct: 120 QGTIRRWNAHRGPMSHG-SKFHRAVGSMGASSDPSRTFKNKRMPGHMGNVNTTVLNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+ ++ LIL+KG VPG K + +R++ K+
Sbjct: 179 RIIPEKNLILIKGGVPGPNKG-LVQIRNTVKA 209
>gi|110800321|ref|YP_697094.1| 50S ribosomal protein L3 [Clostridium perfringens ATCC 13124]
gi|161485641|ref|NP_563321.2| 50S ribosomal protein L3 [Clostridium perfringens str. 13]
gi|182626914|ref|ZP_02954647.1| ribosomal protein L3 [Clostridium perfringens D str. JGS1721]
gi|42559666|sp|Q8XHS3|RL3_CLOPE RecName: Full=50S ribosomal protein L3
gi|123049583|sp|Q0TMP6|RL3_CLOP1 RecName: Full=50S ribosomal protein L3
gi|110674968|gb|ABG83955.1| 50S ribosomal protein L3 [Clostridium perfringens ATCC 13124]
gi|177907704|gb|EDT70319.1| ribosomal protein L3 [Clostridium perfringens D str. JGS1721]
Length = 209
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 89/212 (41%), Positives = 130/212 (61%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++ +K+GMT +++ GR IPVTV+ C VV +T++ +GY A+QVG GE + K
Sbjct: 1 MKKAIIGKKVGMTQIFDENGRVIPVTVVEAGPCVVVQKKTVETDGYDAIQVGFGELREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP +G F+ VS ++ L EFR+ +D VG F +G VDV+G++ GKGF
Sbjct: 61 VNKPRKGHFAKAGVSLRRTLKEFRM-EDVANYNVGDEIKVDTFEIGDKVDVSGVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR N +HG S HR+ GS G DP R FKNK+M G MG TV NLEVV
Sbjct: 120 QGTIKRWNASRGPMSHG-SKFHRAPGSMGAASDPSRTFKNKRMPGHMGAKNTTVLNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+ ++ +IL+KG +PG K + + +R+S K+
Sbjct: 179 KIMPEKNIILIKGGIPGPNKGTVV-IRNSVKA 209
>gi|257069508|ref|YP_003155763.1| 50S ribosomal protein L3P [Brachybacterium faecium DSM 4810]
gi|256560326|gb|ACU86173.1| LSU ribosomal protein L3P [Brachybacterium faecium DSM 4810]
Length = 226
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 96/213 (45%), Positives = 131/213 (61%), Gaps = 2/213 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
SGV+ KLGMT V++ G+ +PVTV+ V R+++ +GY AVQ+ G+ + VS
Sbjct: 14 SGVLGTKLGMTQVWDENGKLVPVTVVQTGANVVTQIRSVETDGYDAVQIAFGQIDPRKVS 73
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
+P+RG F V+P++ L E R +G S F GQ VDV G + GKG +G
Sbjct: 74 QPLRGHFEKAGVTPRRHLVELRTVN-AAEYTLGQEIDASVFEAGQKVDVVGTSKGKGTAG 132
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F G+ A+HG +HR GS G PGRVFK ++MAGRMGG+R +V+NL V +V
Sbjct: 133 VMKRHGFAGVGASHGQHRNHRKPGSIGGASTPGRVFKGQRMAGRMGGDRTSVQNLTVHAV 192
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D ++GL+LVKG VPGA K +LVR + KS
Sbjct: 193 DVEKGLVLVKGAVPGA-KGGLVLVRSAVKSPAK 224
>gi|326490890|dbj|BAJ90112.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 313
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 105/212 (49%), Positives = 144/212 (67%), Gaps = 2/212 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+GV+ K GM+ +++ G ++P+TVL +D+ V +T +K G+ A+Q+GAG+ K K++
Sbjct: 66 RTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVCQVKTAEKEGFYALQLGAGQKKEKHL 125
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F S V K+KL EF V + D LLPVG+ S +F GQ VDV G+T GKGF+
Sbjct: 126 TKPEVGHFRSQGVPLKRKLKEFPVTE-DALLPVGTTISVRHFVPGQFVDVIGITKGKGFA 184
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRH F G+ A+HG S+SHRS GSTG R PGRVFKN+KM GRMGG + TVKN+ V
Sbjct: 185 GGMKRHGFSGMPASHGASLSHRSIGSTGQRDSPGRVFKNRKMPGRMGGVQRTVKNVWVYQ 244
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+D R L+ +KG VPG + S++ V+DS
Sbjct: 245 IDPARNLLYLKGQVPGPQ-GSFLFVKDSIYKK 275
>gi|307823442|ref|ZP_07653671.1| 50S ribosomal protein L3 [Methylobacter tundripaludum SV96]
gi|307735427|gb|EFO06275.1| 50S ribosomal protein L3 [Methylobacter tundripaludum SV96]
Length = 216
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 100/212 (47%), Positives = 139/212 (65%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK GMT V+ +G +PVTVL +D+ +V + ++ +GY ++QV AG+ K
Sbjct: 1 MSIGLIGRKCGMTRVFCEDGSSVPVTVLQIDSNRVTQVKGIEVDGYRSIQVAAGDKKSSR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+K M G +++ NV+ + L+EFR++ + + L VGS S F+ GQ+VDV G +IGKG
Sbjct: 61 VNKAMAGHYAAANVTAGRGLWEFRLEDGEGEDLSVGSQLSLDVFSAGQVVDVQGKSIGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G +KRHNF ATHG S SHR GS G Q PGRVFK KKM G MG +VTV+NL +
Sbjct: 121 FAGGIKRHNFSMQDATHGNSRSHRVLGSIGMCQTPGRVFKGKKMEGHMGAEKVTVQNLTI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
S+D R LILVKG VPGA K +++ + K
Sbjct: 181 HSIDTARNLILVKGAVPGA-KGGDVVITPAMK 211
>gi|226953871|ref|ZP_03824335.1| 50S ribosomal protein L3 [Acinetobacter sp. ATCC 27244]
gi|294651634|ref|ZP_06728938.1| 50S ribosomal protein L3 [Acinetobacter haemolyticus ATCC 19194]
gi|226835354|gb|EEH67737.1| 50S ribosomal protein L3 [Acinetobacter sp. ATCC 27244]
gi|292822483|gb|EFF81382.1| 50S ribosomal protein L3 [Acinetobacter haemolyticus ATCC 19194]
Length = 214
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 96/213 (45%), Positives = 135/213 (63%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK GMT V+ G +PVTV+ +D ++ +TL+ +GY A+QV GE +
Sbjct: 3 MAIGLVGRKCGMTRVFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAIQVTTGERRESR 62
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+ +G F+ V+ + + EFRV + + + VG FTVGQ+VDVTG + GKG
Sbjct: 63 VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGSIGVDLFTVGQIVDVTGQSKGKG 122
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KR NF ATHG S+SHR GSTG Q PGRVFK KKMAG +G RVTV+ LE+
Sbjct: 123 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 182
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VS+D +R +++VKG +PG+ ++VR + K+
Sbjct: 183 VSIDAERSVLVVKGAIPGS-TGGDVIVRPTIKA 214
>gi|239929514|ref|ZP_04686467.1| 50S ribosomal protein L3 [Streptomyces ghanaensis ATCC 14672]
gi|291437839|ref|ZP_06577229.1| 50S ribosomal protein L3 [Streptomyces ghanaensis ATCC 14672]
gi|291340734|gb|EFE67690.1| 50S ribosomal protein L3 [Streptomyces ghanaensis ATCC 14672]
Length = 214
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 97/211 (45%), Positives = 128/211 (60%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT V++ R +PVTV+ V RT D +GY +VQ+ GE + V+
Sbjct: 6 KGILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVN 65
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G
Sbjct: 66 KPLKGHFAKADVTPRRHLVEIRTS-DASEYTLGQEVTAEVFEAGVKVDVTGKSKGKGFAG 124
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRHNFGGL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +V
Sbjct: 125 VMKRHNFGGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D ++GL+L+KG VPG +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214
>gi|311070763|ref|YP_003975686.1| 50S ribosomal protein L3 [Bacillus atrophaeus 1942]
gi|310871280|gb|ADP34755.1| 50S ribosomal protein L3 [Bacillus atrophaeus 1942]
Length = 209
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 91/213 (42%), Positives = 129/213 (60%), Gaps = 4/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+Q+G + + K
Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEAAANVVLQKKTAENDGYEAIQLGFDDKREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + +PK+ + E R + D VG F+ G++VDVTG++ GKGF
Sbjct: 61 SNKPEKGHVAKAETAPKRFVKELRGVEMDA-YEVGQEVKVEIFSAGEIVDVTGVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH +HG S HR GS G DP RVFK K + GRMGG ++TV+NLE+V
Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGPV-DPNRVFKGKLLPGRMGGEQITVQNLEIV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD +R L+L+KG VPGA+K S I V+ + KS
Sbjct: 178 KVDAERNLLLIKGNVPGARK-SLITVKSAVKSK 209
>gi|126643095|ref|YP_001086079.1| 50S ribosomal protein L3 [Acinetobacter baumannii ATCC 17978]
gi|184159598|ref|YP_001847937.1| 50S ribosomal protein L3 [Acinetobacter baumannii ACICU]
gi|260557027|ref|ZP_05829244.1| 50S ribosomal protein L3 [Acinetobacter baumannii ATCC 19606]
gi|212288243|sp|B2HZM2|RL3_ACIBC RecName: Full=50S ribosomal protein L3
gi|183211192|gb|ACC58590.1| 50S ribosomal protein L3 [Acinetobacter baumannii ACICU]
gi|260409633|gb|EEX02934.1| 50S ribosomal protein L3 [Acinetobacter baumannii ATCC 19606]
Length = 214
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 98/213 (46%), Positives = 135/213 (63%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK GMT ++ G +PVTV+ +D ++ +TL+ +GY AVQV GE +
Sbjct: 3 MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 62
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+ +G F+ V+ + + EFRV + + + VG FTVGQ+VDVTG + GKG
Sbjct: 63 VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQIVDVTGQSKGKG 122
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KR NF ATHG S+SHR GSTG Q PGRVFK KKMAG +G RVTV+ LE+
Sbjct: 123 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 182
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VSVD +R +++VKG +PGA ++VR + K+
Sbjct: 183 VSVDTERSVLVVKGAIPGA-TGGDVIVRPTIKA 214
>gi|21223082|ref|NP_628861.1| 50S ribosomal protein L3 [Streptomyces coelicolor A3(2)]
gi|256785823|ref|ZP_05524254.1| 50S ribosomal protein L3 [Streptomyces lividans TK24]
gi|289769715|ref|ZP_06529093.1| 50S ribosomal protein L3 [Streptomyces lividans TK24]
gi|42559700|sp|Q9L0E0|RL3_STRCO RecName: Full=50S ribosomal protein L3
gi|7321292|emb|CAB82070.1| 50S ribosomal protein L3 [Streptomyces coelicolor A3(2)]
gi|289699914|gb|EFD67343.1| 50S ribosomal protein L3 [Streptomyces lividans TK24]
Length = 214
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 92/211 (43%), Positives = 125/211 (59%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT V++ R +PVTV+ V RT D +GY +VQ+ GE + V+
Sbjct: 6 KGILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVN 65
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP++G F+ +V+P++ L E R +G + F G VDVT + GKGF+G
Sbjct: 66 KPLKGHFAKADVTPRRHLVEIR-TAAASEYTLGQEITAEAFESGVKVDVTAKSKGKGFAG 124
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRHNF G +A+HG HR GS G PGRVFK +MAGRMG RVT +NL V +V
Sbjct: 125 VMKRHNFKGGKASHGAHRVHRMPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTVHAV 184
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D ++GL+L+KG VPG +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214
>gi|297582450|ref|YP_003698230.1| 50S ribosomal protein L3 [Bacillus selenitireducens MLS10]
gi|297140907|gb|ADH97664.1| 50S ribosomal protein L3 [Bacillus selenitireducens MLS10]
Length = 208
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 82/212 (38%), Positives = 119/212 (56%), Gaps = 4/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGMT +++ G ++PVTV+ V+ +T + GY A+Q+G + K
Sbjct: 1 MTKGILGKKLGMTQIFSENGEQVPVTVIEASPNVVLQKKTAEGEGYEAIQIGYDDKKANR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+ P +G +PK+ + E R D +G F G +DVTG + GKGF
Sbjct: 61 QNSPEKGHAEKAKTAPKRFVKEIRDVNTAD-YEIGQEIKVDIFAEGDAIDVTGTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRHN +HG S HR GS G DP V K + G+MGG VT++NLEVV
Sbjct: 120 QGAIKRHNQSRGPMSHG-SRYHRRPGSMGPV-DPNHVRPGKLLPGQMGGETVTIQNLEVV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R +ILVKG VPGA+K S++ + + K+
Sbjct: 178 KVDTERNVILVKGNVPGARK-SFVTITSATKA 208
>gi|120609041|ref|YP_968719.1| 50S ribosomal protein L3 [Acidovorax citrulli AAC00-1]
gi|326315224|ref|YP_004232896.1| 50S ribosomal protein L3 [Acidovorax avenae subsp. avenae ATCC
19860]
gi|166233109|sp|A1TJ07|RL3_ACIAC RecName: Full=50S ribosomal protein L3
gi|120587505|gb|ABM30945.1| LSU ribosomal protein L3P [Acidovorax citrulli AAC00-1]
gi|323372060|gb|ADX44329.1| 50S ribosomal protein L3 [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 224
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 85/216 (39%), Positives = 127/216 (58%), Gaps = 3/216 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GM ++ +G +PVTV+ + N +V +T + +GY+A+QV G K V
Sbjct: 6 SLGLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQVKTQENDGYVALQVTFGSRKASRV 65
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVG--SVFSPSYFTVGQLVDVTGMTIGKG 119
+KP G + V + + EFRV + +V F+VGQ VDV G +IGKG
Sbjct: 66 TKPEAGHLAKAGVEAGEIIREFRVTAETAGKYATGAAVPVADVFSVGQKVDVQGTSIGKG 125
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KRHN RA+HG S SH GS G QDPGRVF K+M G +G T +NL+V
Sbjct: 126 YAGTIKRHNMASQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDATTTTQNLDV 185
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
+ VD+ R L+L+KG +PG+ K ++ VR + K+ +
Sbjct: 186 IRVDEARQLLLIKGAIPGS-KGGFVTVRPAVKAKAS 220
>gi|257095040|ref|YP_003168681.1| 50S ribosomal protein L3 [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257047564|gb|ACV36752.1| ribosomal protein L3 [Candidatus Accumulibacter phosphatis clade
IIA str. UW-1]
Length = 214
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 101/213 (47%), Positives = 132/213 (61%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ +G +PVTVL + N +V +T +GY VQV G+ +
Sbjct: 1 MSLGLVGRKVGMTRIFTDDGISVPVTVLDVSNNRVAQIKTPQNDGYSVVQVAFGKRRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
VSKP+ G + V L EF V + L G S + F VGQ VDVTG TIGKG
Sbjct: 61 VSKPLAGHLAKAGVEAGHVLKEFPVSVAELATLKPGDQISVTIFAVGQKVDVTGKTIGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
FSG +KRH+F A HG S+SH++ GSTG QDPGRVF KKMAG +G + T +NLEV
Sbjct: 121 FSGGIKRHHFSSQGAAHGNSVSHQALGSTGMAQDPGRVFPGKKMAGHLGAVKRTQQNLEV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD R L+L+KG VPG+ K S ++VR + K+
Sbjct: 181 VRVDVDRQLLLLKGAVPGS-KGSDVIVRPAVKA 212
>gi|291613236|ref|YP_003523393.1| 50S ribosomal protein L3 [Sideroxydans lithotrophicus ES-1]
gi|291583348|gb|ADE11006.1| 50S ribosomal protein L3 [Sideroxydans lithotrophicus ES-1]
Length = 214
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 92/213 (43%), Positives = 125/213 (58%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT ++ +G +PVTVL + N +V +T +GY AVQV G +
Sbjct: 1 MSLGLVGRKIGMTRIFTDDGTSLPVTVLDVSNNRVTQIKTAATDGYSAVQVAYGTRRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+K G F+ V L EF + L +G F VGQ VDVTG+TIGKG
Sbjct: 61 VTKAAAGHFAKAGVEAGSVLKEFTATPEQLSSLTLGGKVGVDMFQVGQKVDVTGVTIGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KR++F RATHG S SH GS G QDPGRVF K+M G +G + TV+NL++
Sbjct: 121 YAGTIKRYHFKSGRATHGNSKSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVQRTVQNLKI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V +D R L+LV G VPGA ++VR + K+
Sbjct: 181 VRIDADRQLLLVMGAVPGAP-GGDVIVRPAVKA 212
>gi|229823535|ref|ZP_04449604.1| hypothetical protein GCWU000282_00833 [Catonella morbi ATCC 51271]
gi|229786979|gb|EEP23093.1| hypothetical protein GCWU000282_00833 [Catonella morbi ATCC 51271]
Length = 211
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 85/211 (40%), Positives = 124/211 (58%), Gaps = 3/211 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT + G +PVTV+ V+ +T++ +GY AVQ+G + +
Sbjct: 1 MTKGILGKKVGMTQFFTENGELVPVTVIEATPNVVLQVKTMENDGYEAVQLGFQDLREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EFR + + VG + F G +VDVTG + GKGF
Sbjct: 61 SNKPAKGHVAKANATPKRFIREFREVELGE-YQVGQEITVETFAAGDIVDVTGTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH HG S HR GS G P RVFK K + G+ GG RVT++NLEVV
Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGGASFPSRVFKGKGLPGQTGGERVTIQNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+VD + +IL+KG VPGAKK S + ++ + K
Sbjct: 179 AVDVENNVILIKGNVPGAKK-SLVEIKQAIK 208
>gi|218187896|gb|EEC70323.1| hypothetical protein OsI_01192 [Oryza sativa Indica Group]
Length = 319
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 102/212 (48%), Positives = 145/212 (68%), Gaps = 2/212 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+GV+ K GM+ +++ G ++P+TVL +D+ V +T +K G+ A+Q+GAG+ K K++
Sbjct: 74 RTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVCQVKTAEKEGFFALQLGAGQKKEKHL 133
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F + V K+KL EF V + D L+P+G+ + +F GQ VDVTG+T GKGF+
Sbjct: 134 TKPEVGHFRAQGVPLKRKLREFPVTE-DALIPLGTTITVRHFVPGQFVDVTGITKGKGFA 192
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRH F G+ A+HG S+SHRS GSTG R PGRVFKN+KM GRMGG + TVKN+ V
Sbjct: 193 GGMKRHGFSGMPASHGASLSHRSIGSTGQRDAPGRVFKNRKMPGRMGGVQRTVKNVWVYQ 252
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+D R L+ +KG VPG + S++ V+DS
Sbjct: 253 IDPARNLLYLKGQVPGPQ-GSFVFVKDSIYKK 283
>gi|115435682|ref|NP_001042599.1| Os01g0251100 [Oryza sativa Japonica Group]
gi|7106521|dbj|BAA92206.1| putative ribosomal protein L3 [Oryza sativa Japonica Group]
gi|113532130|dbj|BAF04513.1| Os01g0251100 [Oryza sativa Japonica Group]
gi|215678787|dbj|BAG95224.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215707174|dbj|BAG93634.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222618109|gb|EEE54241.1| hypothetical protein OsJ_01115 [Oryza sativa Japonica Group]
Length = 319
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 102/212 (48%), Positives = 145/212 (68%), Gaps = 2/212 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+GV+ K GM+ +++ G ++P+TVL +D+ V +T +K G+ A+Q+GAG+ K K++
Sbjct: 74 RTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVCQVKTAEKEGFFALQLGAGQKKEKHL 133
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F + V K+KL EF V + D L+P+G+ + +F GQ VDVTG+T GKGF+
Sbjct: 134 TKPEVGHFRAQGVPLKRKLREFPVTE-DALIPLGTTITVRHFVPGQFVDVTGITKGKGFA 192
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRH F G+ A+HG S+SHRS GSTG R PGRVFKN+KM GRMGG + TVKN+ V
Sbjct: 193 GGMKRHGFSGMPASHGASLSHRSIGSTGQRDAPGRVFKNRKMPGRMGGVQRTVKNVWVYQ 252
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+D R L+ +KG VPG + S++ V+DS
Sbjct: 253 IDPARNLLYLKGQVPGPQ-GSFVFVKDSIYKK 283
>gi|303240971|ref|ZP_07327482.1| 50S ribosomal protein L3 [Acetivibrio cellulolyticus CD2]
gi|302591557|gb|EFL61294.1| 50S ribosomal protein L3 [Acetivibrio cellulolyticus CD2]
Length = 212
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 92/214 (42%), Positives = 131/214 (61%), Gaps = 2/214 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++ K+GMT ++N G IPVTV+ C V+ +T++ +GY AV+VG +A K
Sbjct: 1 MKKFILGTKIGMTQIFNEAGLAIPVTVIQAGPCTVIQKKTVETDGYGAVKVGFADANEKR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP +G FS + V+PKK + EFR D + F G+ +DVTG++ GKGF
Sbjct: 61 LNKPQKGQFSKLKVAPKKYIREFRADDFDKYEAGQEIKVADMFENGEKIDVTGISKGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKRH THG S+ HR GS G P RVFK KK+ G MG RVTV+NL++V
Sbjct: 121 AGVMKRHGHKTGPLTHG-SMYHRRVGSMGANTSPARVFKGKKLPGHMGVERVTVQNLDIV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VD +R L+LVKG VPGA K ++++++ KS
Sbjct: 180 RVDAERNLLLVKGAVPGA-KGGLVIIKNTVKSGK 212
>gi|305665137|ref|YP_003861424.1| 50S ribosomal protein L3 [Maribacter sp. HTCC2170]
gi|88709889|gb|EAR02121.1| 50S ribosomal protein L3 [Maribacter sp. HTCC2170]
Length = 207
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 82/207 (39%), Positives = 122/207 (58%), Gaps = 4/207 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT +++ G+ +P TV+ C V RT + +GY A+Q+G + K
Sbjct: 1 MSGLIGKKVGMTSIFDENGKNVPCTVIEAGPCVVTQVRTEEVDGYSALQLGFDDKAEKRA 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+K G F SPKKK+ EF+ + + +G F G+ VDV G + GKGF
Sbjct: 61 NKAESGHFKKAGASPKKKVVEFQGFEGE--YKLGDTIGVDVFVEGEFVDVVGTSKGKGFQ 118
Query: 122 GAMKRHNFG-GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH F +ATHG R+ GS G P RVFK +MAGRMGG+R TV+NL V+
Sbjct: 119 GVVKRHGFAGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGRMGGDRTTVQNLRVL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVR 207
+ ++ L++VKGCVPG KN+++ ++
Sbjct: 179 KIVPEKNLLVVKGCVPG-HKNAYVTIK 204
>gi|307136201|gb|ADN34039.1| 50S ribosomal protein l3 [Cucumis melo subsp. melo]
Length = 328
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 105/214 (49%), Positives = 146/214 (68%), Gaps = 2/214 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+GV+A K GM+ +++ G RIP+TVL +D+ V +T++K G A+Q+G G+ K K++
Sbjct: 79 RTGVIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTIEKEGITALQIGCGQKKEKHL 138
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SKP G F + V K+KL EF V + D LLPVG+ +F GQ VDVTG++ GKGF
Sbjct: 139 SKPELGHFRAQGVPLKRKLKEFPVSQ-DALLPVGTEIGARHFVPGQYVDVTGISRGKGFQ 197
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRH F G+ A+HG S+SHRS GSTG R PG+VFK +KMAGRMGG + TVKN+ +
Sbjct: 198 GVMKRHGFKGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGGKQRTVKNVWIYK 257
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
+D R LI VKG +PGA+ S++ ++D+ +N
Sbjct: 258 IDPARNLIWVKGPIPGAE-GSFVFIKDAMYKRLN 290
>gi|300742057|ref|ZP_07072078.1| 50S ribosomal protein L3 [Rothia dentocariosa M567]
gi|311111973|ref|YP_003983195.1| 50S ribosomal protein L3 [Rothia dentocariosa ATCC 17931]
gi|300381242|gb|EFJ77804.1| 50S ribosomal protein L3 [Rothia dentocariosa M567]
gi|310943467|gb|ADP39761.1| 50S ribosomal protein L3 [Rothia dentocariosa ATCC 17931]
Length = 218
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 88/211 (41%), Positives = 122/211 (57%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT V++ +G+ +PVTV+ D+ + R + +GY AVQ+G G + V+
Sbjct: 10 KGLLGTKLGMTQVWDEDGKVVPVTVVKADSNVITQIRNQETDGYHAVQIGFGSIDSRKVT 69
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP+ G F V+P++ L E R D +G + F GQ VDV G T GKGF+G
Sbjct: 70 KPLAGHFEKAGVTPRRHLVELR-TADAAEYSLGQELTVEMFEPGQKVDVVGKTKGKGFAG 128
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F G+ A+HG +HR GS G P RVFK +MAGRMG R T NL + V
Sbjct: 129 VMKRHGFKGVGASHGQHKNHRKPGSIGGASYPARVFKGMRMAGRMGAARHTTLNLTIQGV 188
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D + ++L+KG +PG K +LVR + K A
Sbjct: 189 DAENNVLLIKGAIPGP-KGGVVLVRTAVKGA 218
>gi|295394348|ref|ZP_06804573.1| 50S ribosomal protein L3 [Brevibacterium mcbrellneri ATCC 49030]
gi|294972806|gb|EFG48656.1| 50S ribosomal protein L3 [Brevibacterium mcbrellneri ATCC 49030]
Length = 224
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 91/211 (43%), Positives = 122/211 (57%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT V++ +PVTV+ + V R + +GY AVQ+G GE + V+
Sbjct: 16 KGLMGTKLGMTQVWDENNNLVPVTVISASSNVVTQIRNEEVDGYSAVQIGYGEIDPRKVN 75
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP +G F V+P++ L E R D +G S F G VDVT T GKGF+G
Sbjct: 76 KPAKGHFEKAGVAPRRHLVELR-TADAGEYELGQELSTEVFEAGIKVDVTANTKGKGFAG 134
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F G+ A+HG +HR GS G PGRVFK +MAGRMG R T +NL + S+
Sbjct: 135 VMKRHGFAGVGASHGQHRNHRKPGSIGGAATPGRVFKGMRMAGRMGNVRHTTQNLTIHSI 194
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D + L+L+KG VPG K + +LVR + K A
Sbjct: 195 DSENNLLLIKGAVPGP-KGAVVLVRSAAKGA 224
>gi|262280225|ref|ZP_06058009.1| 50S ribosomal protein L3 [Acinetobacter calcoaceticus RUH2202]
gi|262258003|gb|EEY76737.1| 50S ribosomal protein L3 [Acinetobacter calcoaceticus RUH2202]
Length = 214
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 96/213 (45%), Positives = 135/213 (63%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK GMT ++ G +PVTV+ +D ++ +TL+ +GY AVQV GE +
Sbjct: 3 MAIGLVGRKCGMTRIFTDAGVSVPVTVIEVDPNRITQIKTLETDGYQAVQVTTGERRESR 62
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+ +G F+ V+ + + EFRV + + + VG FTVGQ+VDVTG + GKG
Sbjct: 63 VTNAQKGHFAKAGVAAGRLVKEFRVTEAELEGREVGGTIGVDLFTVGQVVDVTGQSKGKG 122
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KR NF ATHG S+SHR GSTG Q PGRVFK KKMAG +G RVTV+ LE+
Sbjct: 123 FQGGVKRWNFRTQDATHGNSVSHRVLGSTGQNQTPGRVFKGKKMAGHLGDERVTVQGLEI 182
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VS+D +R +++VKG +PG+ ++VR + K+
Sbjct: 183 VSIDAERSVLVVKGAIPGS-TGGDVIVRPTIKA 214
>gi|219849887|ref|YP_002464320.1| 50S ribosomal protein L3 [Chloroflexus aggregans DSM 9485]
gi|254803662|sp|B8G6S5|RL3_CHLAD RecName: Full=50S ribosomal protein L3
gi|219544146|gb|ACL25884.1| ribosomal protein L3 [Chloroflexus aggregans DSM 9485]
Length = 210
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 91/212 (42%), Positives = 128/212 (60%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GM + EGR IPVTV+ C V RT +++GY AVQ+G E + +
Sbjct: 1 MIHGLLGRKIGMMQYFTKEGRAIPVTVIAAGPCIVTQIRTPERDGYSAVQLGYEEVEARK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP +G + + L EF D G V + F GQ VD++G + G+GF
Sbjct: 61 LTKPQQGHLKASGGKMLRYLREFSAD-DPLAHKPGEVVTVELFKPGQKVDISGTSKGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KRH F G THG S HR+ GS G PGRV+K ++MAGRMGG+RVT++NLEVV
Sbjct: 120 AGVVKRHGFRGGPKTHGQSDRHRAPGSIGAGTTPGRVWKGQRMAGRMGGDRVTIQNLEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V ++ L+LVKG VPGA +N + +R + K
Sbjct: 180 EVLPEQNLLLVKGSVPGA-RNGLLQIRKAVKG 210
>gi|154507864|ref|ZP_02043506.1| hypothetical protein ACTODO_00346 [Actinomyces odontolyticus ATCC
17982]
gi|153797498|gb|EDN79918.1| hypothetical protein ACTODO_00346 [Actinomyces odontolyticus ATCC
17982]
Length = 221
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 93/211 (44%), Positives = 133/211 (63%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
++ RKLGMT V++ +G +P+TV+ + V RT + +GY A+Q+G GE + V+
Sbjct: 13 KALLGRKLGMTQVWDADGHLVPLTVVQVGTNVVTQVRTDEVDGYSAIQLGFGEIDSRKVT 72
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP++G F V+P++ L E R + D +G + F G+ VDV+G T GKGF+G
Sbjct: 73 KPLQGHFEKAGVAPRRHLVEVRTSEHDS-YELGQELDATTFEAGEGVDVSGTTKGKGFAG 131
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F G+ A+HG +HR GS G PGR+FK +MAGRMGGNR TV+NL + +V
Sbjct: 132 VMKRHGFAGVSASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGGNRRTVQNLTIQAV 191
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D ++GL+L+ G +PG KN +LVR S K A
Sbjct: 192 DAEKGLLLISGAIPGP-KNGVVLVRSSVKGA 221
>gi|19551746|ref|NP_599748.1| 50S ribosomal protein L3 [Corynebacterium glutamicum ATCC 13032]
gi|62389401|ref|YP_224803.1| 50S ribosomal protein L3 [Corynebacterium glutamicum ATCC 13032]
gi|145294657|ref|YP_001137478.1| 50S ribosomal protein L3 [Corynebacterium glutamicum R]
gi|42559652|sp|Q8NT09|RL3_CORGL RecName: Full=50S ribosomal protein L3
gi|166233137|sp|A4QBH9|RL3_CORGB RecName: Full=50S ribosomal protein L3
gi|21323271|dbj|BAB97899.1| Ribosomal protein L3 [Corynebacterium glutamicum ATCC 13032]
gi|41324735|emb|CAF19217.1| 50S RIBOSOMAL PROTEIN L3 [Corynebacterium glutamicum ATCC 13032]
gi|140844577|dbj|BAF53576.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 218
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 86/214 (40%), Positives = 125/214 (58%), Gaps = 2/214 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT +++ E R IPVTV+ C V RT++ +GY A+Q+ GE + V+
Sbjct: 7 KGILGTKLGMTQIFDEENRVIPVTVVEAGPCVVSQIRTVETDGYNAIQIAYGEIDPRKVN 66
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
+P+ G F V+P++ + E R+ D VG + F + VDVTG T GKG++G
Sbjct: 67 QPLTGHFKKAGVTPRRHVTEIRMD-DVSGYEVGQDVTVEIFNDIKFVDVTGTTKGKGYAG 125
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
AMKRH F G A HG +HR G G PGR+FK K+MAGRMG +RVT +NL+V +
Sbjct: 126 AMKRHGFAGQGAGHGNQAAHRRVGGIGAAATPGRIFKGKRMAGRMGNDRVTTQNLKVQKI 185
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
D +IL+KG +PG + + V+ + K +
Sbjct: 186 DADANIILIKGAIPG-NRGGIVTVKTAVKGGAHA 218
>gi|262066304|ref|ZP_06025916.1| 50S ribosomal protein L3 [Fusobacterium periodonticum ATCC 33693]
gi|294783642|ref|ZP_06748966.1| 50S ribosomal protein L3 [Fusobacterium sp. 1_1_41FAA]
gi|291379999|gb|EFE87517.1| 50S ribosomal protein L3 [Fusobacterium periodonticum ATCC 33693]
gi|294480520|gb|EFG28297.1| 50S ribosomal protein L3 [Fusobacterium sp. 1_1_41FAA]
Length = 211
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 89/213 (41%), Positives = 134/213 (62%), Gaps = 3/213 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT ++ +G+ +PVTV+ V+ +T +K+GY+A+Q+G E K KN
Sbjct: 1 MSGILGKKIGMTQIF-EDGKFVPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNT 59
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+ G F+ V P++ + E V + + +G VD+TG + GKG S
Sbjct: 60 TKPLMGIFNKAGVKPQRFVRELAV-ETVEGYELGQEIKVDVLAEVGYVDITGTSKGKGTS 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRH FGG RA+HGVS +HR GS G PG+V K K+MAG+ G VTV+NL+VV
Sbjct: 119 GVMKRHGFGGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKRMAGQHGNATVTVQNLKVVK 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VD + L+L+KG VPGA KNS+++++ + K +
Sbjct: 179 VDVEHNLLLIKGAVPGA-KNSYLVIKPAVKKVI 210
>gi|294341610|emb|CAZ90027.1| 50S ribosomal protein L3 [Thiomonas sp. 3As]
Length = 215
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 98/211 (46%), Positives = 132/211 (62%), Gaps = 2/211 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G+V RK+GMT V+ +G I VTVL +V RT D +GY AVQV G K ++K
Sbjct: 2 GLVTRKVGMTRVFTDDGASIAVTVLDASGNRVSQVRTQDVDGYSAVQVAYGSRKPSRLTK 61
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
G + V P + L EF + + G+ S F VGQ+VD G++IGKGF+G
Sbjct: 62 GQAGHLAKAGVEPAEILKEFDLPAEKAADYAPGATVPASLFQVGQMVDAQGVSIGKGFAG 121
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
++KRHNF RA+HG S++ R+ GS G QDPGRVF K+MAG+MG VTV+NLEVV +
Sbjct: 122 SIKRHNFSSNRASHGNSVTTRAPGSIGMAQDPGRVFPGKRMAGQMGNETVTVQNLEVVRI 181
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D+ R LILVKG VPG++ ++ +R + KSA
Sbjct: 182 DEARQLILVKGAVPGSRSG-FVFLRPAVKSA 211
>gi|296141115|ref|YP_003648358.1| 50S ribosomal protein L3 [Tsukamurella paurometabola DSM 20162]
gi|296029249|gb|ADG80019.1| 50S ribosomal protein L3 [Tsukamurella paurometabola DSM 20162]
Length = 218
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 88/214 (41%), Positives = 125/214 (58%), Gaps = 2/214 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT V++ R +PVTV+ V RT +GY AVQ+ G + V+
Sbjct: 7 KGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTQIRTEATDGYDAVQIAFGAIDPRKVN 66
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP+ G F+ V+P++ + E R+ D VG F+ G+ VDVTG++ GKG++G
Sbjct: 67 KPVSGQFAKAGVTPRRHIAELRI-ADTSEYEVGQELGADVFSGGEFVDVTGISKGKGYAG 125
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F GL A+HG HR+ GS G PGRVFK +MAGRMG ++VT +NL V V
Sbjct: 126 VMKRHGFAGLGASHGAQAVHRAPGSIGGCATPGRVFKGVRMAGRMGSDKVTTQNLTVFKV 185
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
D G++L+KG +PG +K ++VR + K
Sbjct: 186 DADAGVLLIKGAIPG-RKGGLVMVRTAVKGGARA 218
>gi|326803033|ref|YP_004320851.1| 50S ribosomal protein L3 [Aerococcus urinae ACS-120-V-Col10a]
gi|326651005|gb|AEA01188.1| 50S ribosomal protein L3 [Aerococcus urinae ACS-120-V-Col10a]
Length = 211
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 86/213 (40%), Positives = 126/213 (59%), Gaps = 3/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT + G +PVTV+ V+ +TL+ +GY AVQ+G + +
Sbjct: 1 MTKGILGKKVGMTQFFTESGELVPVTVIEAQANVVLQVKTLENDGYEAVQLGFDDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + +PK+ + EF+ + + VGS F G +VDVTG + GKGF
Sbjct: 61 ANKPEQGHVAKAETTPKRFIREFKDVELGE-YEVGSEVKVDIFQEGDIVDVTGTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH +HG S HR+ GS G D +VFK K + G+MGGN VT++NLE+V
Sbjct: 120 QGAIKRHGQQRGPMSHG-SHYHRAAGSMGMASDASKVFKGKNLPGQMGGNTVTIQNLEIV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
V + +ILVKG VPGAKK S + ++ + KSA
Sbjct: 179 KVMADKNVILVKGNVPGAKK-SLVEIKTAAKSA 210
>gi|293190259|ref|ZP_06608755.1| 50S ribosomal protein L3 [Actinomyces odontolyticus F0309]
gi|292821075|gb|EFF80028.1| 50S ribosomal protein L3 [Actinomyces odontolyticus F0309]
Length = 221
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 93/211 (44%), Positives = 133/211 (63%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
++ RKLGMT V++ +G +P+TV+ + V RT + +GY A+Q+G GE + V+
Sbjct: 13 KALLGRKLGMTQVWDADGHLVPLTVVQVGTNVVTQVRTDEVDGYSAIQLGFGEIDSRKVT 72
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP++G F V+P++ L E R + D +G + F G+ VDV+G T GKGF+G
Sbjct: 73 KPLQGHFEKAGVAPRRHLVEVRTSEQDS-FELGQELDATTFEAGEGVDVSGTTKGKGFAG 131
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F G+ A+HG +HR GS G PGR+FK +MAGRMGGNR TV+NL + +V
Sbjct: 132 VMKRHGFAGVSASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGGNRRTVQNLTIQAV 191
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D ++GL+L+ G +PG KN +LVR S K A
Sbjct: 192 DAEKGLLLISGAIPGP-KNGVVLVRSSVKGA 221
>gi|157690900|ref|YP_001485362.1| 50S ribosomal protein L3 [Bacillus pumilus SAFR-032]
gi|166989380|sp|A8F985|RL3_BACP2 RecName: Full=50S ribosomal protein L3
gi|157679658|gb|ABV60802.1| ribosomal protein L3 [Bacillus pumilus SAFR-032]
Length = 209
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 93/213 (43%), Positives = 126/213 (59%), Gaps = 4/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ G IPVTV+ V+ +T D +GY A+Q+G + + K
Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVVEAAANVVLQKKTTDTDGYEAIQIGFDDKREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + +PK+ + E R + D VG F G +VDVTG + GKGF
Sbjct: 61 SNKPEKGHVAKAETAPKRFVKELRGAELDA-YEVGQEVKVDIFANGDIVDVTGTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH THG S HR GS G DP RVFK K + GRMGG ++TV+NLE+V
Sbjct: 120 QGAIKRHGQSRGPMTHG-SRYHRRPGSMGPV-DPNRVFKGKLLPGRMGGEQITVQNLEIV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD +R L+L+KG VPGAKK S + V+ + KS
Sbjct: 178 KVDAERNLLLIKGNVPGAKK-SLVTVKSAVKSK 209
>gi|118473190|ref|YP_885819.1| 50S ribosomal protein L3 [Mycobacterium smegmatis str. MC2 155]
gi|166233163|sp|A0QSD1|RL3_MYCS2 RecName: Full=50S ribosomal protein L3
gi|118174477|gb|ABK75373.1| ribosomal protein L3 [Mycobacterium smegmatis str. MC2 155]
Length = 217
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 87/213 (40%), Positives = 126/213 (59%), Gaps = 3/213 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ KLGMT V++ + +PVTV+ V RT +++GY AVQ+ GE + V
Sbjct: 3 RKGILGTKLGMTQVFDENNKVVPVTVVKAGPNVVTRIRTTERDGYSAVQLAYGEISPRKV 62
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
KP+ G F++ V+P++ + E R+ + VG + F+ G VDVTG + GKG
Sbjct: 63 IKPVAGQFAAAGVNPRRHVAELRLDDEAAVAEYEVGQELTAEIFSDGAYVDVTGTSKGKG 122
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G MKRH F G A HG HR GS G PGRVFK +M+GRMG +RVT +NL+V
Sbjct: 123 FAGTMKRHGFRGQGAAHGAQAVHRRPGSIGGCATPGRVFKGTRMSGRMGNDRVTTQNLKV 182
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + G++L+KG +PG + ++VR + K
Sbjct: 183 HKVDAENGVLLIKGAIPG-RNGGLVVVRSAIKR 214
>gi|27380511|ref|NP_772040.1| 50S ribosomal protein L3 [Bradyrhizobium japonicum USDA 110]
gi|42559627|sp|Q89J84|RL3_BRAJA RecName: Full=50S ribosomal protein L3
gi|27353675|dbj|BAC50665.1| 50S ribosomal protein L3 [Bradyrhizobium japonicum USDA 110]
Length = 238
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 126/219 (57%), Positives = 158/219 (72%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT V+ G IPVTVL L NCQVV HRT +KNGY+A+Q+G+G K
Sbjct: 1 MRSGVIAQKVGMTRVFTEAGEHIPVTVLKLGNCQVVGHRTEEKNGYVALQLGSGSRKTVY 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+ K RG F+ V PK+++ EFRV D ++PVG+ +F VGQ VDVTG ++GKGF
Sbjct: 61 MPKAERGQFAVAKVEPKRRVEEFRVTA-DAMIPVGAEIQADHFVVGQFVDVTGTSVGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR NFGGLRATHGVSISHRS GSTG RQDPG+ +KNKKM G MG +R+T NL VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSISHRSIGSTGGRQDPGKTWKNKKMPGHMGVDRITTLNLRVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
+D +RGLILV+G VPG+ K WI VRD+ K + +
Sbjct: 180 QLDVERGLILVEGAVPGS-KGGWIRVRDAVKKPLPKEAP 217
>gi|291460718|ref|ZP_06600108.1| 50S ribosomal protein L3 [Oribacterium sp. oral taxon 078 str.
F0262]
gi|291416677|gb|EFE90396.1| 50S ribosomal protein L3 [Oribacterium sp. oral taxon 078 str.
F0262]
Length = 209
Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats.
Identities = 81/212 (38%), Positives = 117/212 (55%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++A K+GMT +++ G IPVTVL C V +TL+ +GY AVQVG + + +
Sbjct: 1 MKKAILAIKVGMTQIWDENGILIPVTVLQAGPCVVTQVKTLENDGYKAVQVGFQDKRERL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V++P +G F V K+ + EFR + ++ F G VDVT ++ GKGF
Sbjct: 61 VNRPEKGQFDKAGVPCKRFVREFRFENSEE-YKPKDEIKADIFAAGDKVDVTAVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
A++++ HG S HR GS G P RV K M MG RVT +NL VV
Sbjct: 120 QSAIRKYGQHRGPMAHG-SKFHRHQGSNGTSATPSRVLPGKGMPSHMGAVRVTTQNLSVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + GLIL+KG VPG KK + + V+++ K+
Sbjct: 179 RVDAENGLILIKGAVPGPKK-ALVTVKEAVKA 209
>gi|319761138|ref|YP_004125075.1| 50S ribosomal protein l3 [Alicycliphilus denitrificans BC]
gi|330822996|ref|YP_004386299.1| 50S ribosomal protein L3 [Alicycliphilus denitrificans K601]
gi|317115699|gb|ADU98187.1| 50S ribosomal protein L3 [Alicycliphilus denitrificans BC]
gi|329308368|gb|AEB82783.1| 50S ribosomal protein L3 [Alicycliphilus denitrificans K601]
Length = 224
Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats.
Identities = 88/220 (40%), Positives = 128/220 (58%), Gaps = 3/220 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GM ++ +G +PVTV+ + N +V +T + +GY+A+QV G K V
Sbjct: 6 SLGLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQVKTQENDGYVALQVTFGSRKASRV 65
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVG--SVFSPSYFTVGQLVDVTGMTIGKG 119
+KP G + V + + EF V + +V F VGQ VDV G +IGKG
Sbjct: 66 TKPEAGHLAKAGVEAGEIIREFPVTAEVAGKYAAGATVPVADVFAVGQKVDVQGTSIGKG 125
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KRHNFG RA+HG S SH GS G QDPGR+F KKM G +G VT +NL+V
Sbjct: 126 YAGTIKRHNFGSQRASHGNSRSHNVPGSIGMAQDPGRIFPGKKMTGHLGDATVTTQNLDV 185
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
V +D+ R L+L+KG VPG+ K ++ VR + K+ +
Sbjct: 186 VRIDEARQLLLIKGAVPGS-KGGFVTVRPAVKAKASKGAN 224
>gi|288574662|ref|ZP_06393019.1| ribosomal protein L3 [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288570403|gb|EFC91960.1| ribosomal protein L3 [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 208
Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats.
Identities = 95/208 (45%), Positives = 133/208 (63%), Gaps = 2/208 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGMT +YN G+ +PVTV+ C V+ RT +KNGY A+ +G G+ K +
Sbjct: 1 MSLGILGQKLGMTQIYNENGQAVPVTVVEAGPCPVLAVRTEEKNGYDAILLGFGKVKPRK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP++GFF K+ L EFR+ D VG+ + F G+ VD TG++ GKGF
Sbjct: 61 VTKPLKGFFDKAQSEAKRWLKEFRISNASD-YEVGNAVDVTIFEAGEKVDATGVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR+NFGG A+HGVS +HR S+G P VFK K M G++G +VTVKNL VV
Sbjct: 120 AGVIKRYNFGGAPASHGVSKTHRKPNSSGASSYPSHVFKGKTMPGQLGNEQVTVKNLTVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
+VD + L+LVKG +PGA KN +L+
Sbjct: 180 AVDVENNLVLVKGAIPGA-KNGLVLLHK 206
>gi|225175674|ref|ZP_03729668.1| ribosomal protein L3 [Dethiobacter alkaliphilus AHT 1]
gi|225169003|gb|EEG77803.1| ribosomal protein L3 [Dethiobacter alkaliphilus AHT 1]
Length = 213
Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats.
Identities = 93/217 (42%), Positives = 129/217 (59%), Gaps = 4/217 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++ +K+GMT V+ EG+ IPVTV+ C VV +T + +GY AVQ G G K K+
Sbjct: 1 MQKAILGKKVGMTQVFTEEGKVIPVTVIEAGPCVVVQKKTKEVDGYDAVQFGYGAIKEKH 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP+ G F PKK + E R+ +D VG F G VD++G+T GKGF
Sbjct: 61 VTKPLAGHFKKAEQEPKKYIREMRL-EDTASYEVGQEVKADVFAEGDWVDISGVTRGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GA+KRH FG THG S HR GS G D RVFK +K+ GRMGG +VTV+ L+VV
Sbjct: 120 AGAIKRHGFGRGPTTHG-SHYHRGPGSLGAV-DAARVFKGRKLPGRMGGVKVTVQKLKVV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
VD R L+L+ G VPG + + ++++ K+ K
Sbjct: 178 KVDTDRNLLLIHGAVPGP-RGGLVTLKNTVKNVKEAK 213
>gi|34541541|ref|NP_906020.1| 50S ribosomal protein L3 [Porphyromonas gingivalis W83]
gi|188995732|ref|YP_001929984.1| 50S ribosomal protein L3 [Porphyromonas gingivalis ATCC 33277]
gi|42559592|sp|Q7MTL3|RL3_PORGI RecName: Full=50S ribosomal protein L3
gi|226730547|sp|B2RLZ2|RL3_PORG3 RecName: Full=50S ribosomal protein L3
gi|34397858|gb|AAQ66919.1| ribosomal protein L3 [Porphyromonas gingivalis W83]
gi|188595412|dbj|BAG34387.1| 50S ribosomal protein L3 [Porphyromonas gingivalis ATCC 33277]
Length = 205
Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats.
Identities = 90/204 (44%), Positives = 131/204 (64%), Gaps = 4/204 (1%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT V++ EG+ +P TV+ + C V +TL+K+GY A+Q+G +AK K+ +K
Sbjct: 3 GLLGKKIGMTSVFSAEGKNLPCTVIEVGPCVVTQVKTLEKDGYSALQLGFVDAKEKHTTK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P+ G F NV+PK+ L EF+ + + L G V + +F+ VDV G + GKGF G
Sbjct: 63 PLAGHFKKANVAPKRHLAEFKNFEGEHKL--GDVLNVEFFSDADFVDVVGTSKGKGFQGV 120
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G +ATHG R+ G+ G P +VFK +MAG+MG RVTV+NLEV+ V
Sbjct: 121 VKRHGFGGVGQATHGQHNRLRAPGAVGACSYPAKVFKGTRMAGQMGNERVTVQNLEVIKV 180
Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
+ L+LVKG VPGA K S +L+
Sbjct: 181 MPEHNLLLVKGSVPGA-KGSILLI 203
>gi|308178136|ref|YP_003917542.1| 50S ribosomal protein L3 [Arthrobacter arilaitensis Re117]
gi|307745599|emb|CBT76571.1| 50S ribosomal protein L3 [Arthrobacter arilaitensis Re117]
Length = 216
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 92/211 (43%), Positives = 129/211 (61%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT V++ IPVTV+ D+ V +++GY AVQ+G G+ + V+
Sbjct: 8 KGLLGTKLGMTQVWDSNNNLIPVTVVQADSNVVTKLINEERDGYTAVQIGYGQIDPRKVT 67
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP+ G F + V+P++ L E R D G S F GQ VDV G + GKGF+G
Sbjct: 68 KPLAGHFEAAGVTPRRHLVELR-TADAAEYTAGQELSVEVFEAGQKVDVVGTSKGKGFAG 126
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRHNF G+ A+HG +HR GS G PGRVF+ +KMAGRMG RVT +NL + ++
Sbjct: 127 VMKRHNFHGVGASHGAHKNHRKPGSIGGASTPGRVFRGQKMAGRMGAERVTTQNLTIHAI 186
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D ++ L+L+KG VPGA + +LVR++ K A
Sbjct: 187 DAEKNLLLIKGAVPGA-RGRVVLVRNAVKGA 216
>gi|300309456|ref|YP_003773548.1| 50S ribosomal protein L3 [Herbaspirillum seropedicae SmR1]
gi|300072241|gb|ADJ61640.1| 50S ribosomal subunit L3 protein [Herbaspirillum seropedicae SmR1]
Length = 222
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 96/216 (44%), Positives = 125/216 (57%), Gaps = 2/216 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GM ++ +G IPVTVL + N +V +T + +GY AVQV G+ +
Sbjct: 5 MSLGLVGRKVGMMRIFTEDGDSIPVTVLDVSNNRVTQIKTPEVDGYSAVQVTFGQRRASR 64
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V K G F+ V L EFRV L G V F GQ VDV G++IGKG
Sbjct: 65 VVKAAAGHFAKAGVEAGTVLKEFRVDASKAAELKAGDVVGIGMFEAGQKVDVQGVSIGKG 124
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KR+NF RATHG S SH GS G QDPGRVF K+M G +G + TV+NLE+
Sbjct: 125 YAGTIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVKTTVQNLEI 184
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
VD +R L+LVKG VPGA KN ++V + K
Sbjct: 185 ARVDAERQLLLVKGAVPGA-KNGQVIVSPAVKVKAK 219
>gi|156312295|ref|XP_001617804.1| hypothetical protein NEMVEDRAFT_v1g225779 [Nematostella vectensis]
gi|156195878|gb|EDO25704.1| predicted protein [Nematostella vectensis]
Length = 205
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 82/208 (39%), Positives = 127/208 (61%), Gaps = 4/208 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ RK+GMT +++ G+ IP TV+ C V RT + +GY A+Q+G + K K+
Sbjct: 1 MSGLIGRKIGMTSLFDENGKNIPCTVIEAGPCVVTQVRTEEVDGYNALQLGFDDKKAKSS 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+K + G F + K+K+ EF+ +++ +G + +F G+ VDV+G++ GKGF
Sbjct: 61 NKALDGHFKKAGATAKRKVVEFQGFEEE--YKLGDSITVEHFEEGEFVDVSGISKGKGFQ 118
Query: 122 GAMKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH F G +ATHG R+ GS G P RVFK +MAGRMGG +V V+NL V+
Sbjct: 119 GVVKRHGFGGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGRMGGEKVKVQNLRVL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
V + L++VKG +PG KNS++ ++
Sbjct: 179 KVVADKNLLVVKGAIPG-HKNSYVTIQK 205
>gi|315649699|ref|ZP_07902783.1| 50S ribosomal protein L3 [Paenibacillus vortex V453]
gi|315274887|gb|EFU38263.1| 50S ribosomal protein L3 [Paenibacillus vortex V453]
Length = 207
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 84/211 (39%), Positives = 117/211 (55%), Gaps = 4/211 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RKLGMT V+ EG IPVTV+ C V+ + L+ +GY A+QVG + K
Sbjct: 1 MKGILGRKLGMTQVFTPEGIVIPVTVIEAGPCVVLQKKDLENDGYEAIQVGFSDKKENRS 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G N +PK+ + E R + VG F G+ VDVTG++ GKGF
Sbjct: 61 NKPEAGHAKKANTAPKRYVREIRGVDLAS-VEVGQELKADVFAEGEFVDVTGISKGKGFQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR +HG S HR GS G Q RV K K++ G MG VT++ LEVV
Sbjct: 120 GVIKRWGQSRGPMSHG-SRYHRRPGSMGSIQ-ANRVPKGKRLPGHMGNETVTIQKLEVVR 177
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R +ILVKG +PG KK ++ ++++ K
Sbjct: 178 VDAERNVILVKGSIPGPKKG-FVQIKETVKK 207
>gi|269976879|ref|ZP_06183853.1| 50S ribosomal protein L3 [Mobiluncus mulieris 28-1]
gi|306819491|ref|ZP_07453198.1| 50S ribosomal protein L3 [Mobiluncus mulieris ATCC 35239]
gi|269934710|gb|EEZ91270.1| 50S ribosomal protein L3 [Mobiluncus mulieris 28-1]
gi|304647783|gb|EFM45101.1| 50S ribosomal protein L3 [Mobiluncus mulieris ATCC 35239]
Length = 218
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 89/210 (42%), Positives = 130/210 (61%), Gaps = 2/210 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
++ RKLGMT V++ EG+ +PVTV+ ++ V RT +++GY A+Q+G G+ + V+
Sbjct: 10 KALLGRKLGMTQVWDEEGKLVPVTVVEVEKNVVTDIRTPERDGYTALQLGFGQLDERKVT 69
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KPM G F+ V+P++ L E R D D +G F G LVDVTG T GKGF+G
Sbjct: 70 KPMAGHFAKSGVTPRRHLAEVRTT-DADSYELGQELGADLFETGALVDVTGNTKGKGFAG 128
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F G+ ++HG +HR GS G PGRVF+ MAGRMGG R T+ NL+V ++
Sbjct: 129 VMKRHGFQGVSSSHGAHRNHRKPGSIGACATPGRVFRGLNMAGRMGGERRTIMNLKVQAI 188
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
D +GL+++ G +PG K +++R + K
Sbjct: 189 DADKGLVVIAGAIPGP-KGGIVMIRSAVKG 217
>gi|302558994|ref|ZP_07311336.1| 50S ribosomal protein L3 [Streptomyces griseoflavus Tu4000]
gi|302476612|gb|EFL39705.1| 50S ribosomal protein L3 [Streptomyces griseoflavus Tu4000]
Length = 214
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 96/211 (45%), Positives = 127/211 (60%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT V++ R +PVTV+ V RT D +GY +VQ+ GE + V+
Sbjct: 6 KGILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVN 65
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G
Sbjct: 66 KPLKGHFAKADVTPRRHLVEIRTS-DASEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAG 124
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRHNF GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +V
Sbjct: 125 VMKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D ++GL+L+KG VPG +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214
>gi|313206395|ref|YP_004045572.1| LSU ribosomal protein l3p [Riemerella anatipestifer DSM 15868]
gi|312445711|gb|ADQ82066.1| LSU ribosomal protein L3P [Riemerella anatipestifer DSM 15868]
gi|315023664|gb|EFT36668.1| LSU ribosomal protein L3p (L3e) [Riemerella anatipestifer RA-YM]
gi|325336160|gb|ADZ12434.1| Ribosomal protein L3 [Riemerella anatipestifer RA-GD]
Length = 207
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 94/207 (45%), Positives = 134/207 (64%), Gaps = 4/207 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT +++ G+ IP TV+ C V+ RT++K+GY+ Q+G + KNV
Sbjct: 1 MSGIIGKKIGMTSLFDESGKNIPCTVIQAGPCSVLQVRTVEKDGYVGYQLGFDDKSEKNV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
K + G F +PK KL EF D L VG + F+ G+ VDVTG + GKGF
Sbjct: 61 GKALAGHFKKAGSTPKAKLHEFH--HGFDNLQVGDEVTVKLFSEGEYVDVTGTSKGKGFQ 118
Query: 122 GAMKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH F G ++ATHG R+ GS G DP RVFK +MAGRMGG +VTV+NL+V+
Sbjct: 119 GVVKRHGFGGVMQATHGQHNRLRAPGSIGAGSDPSRVFKGLRMAGRMGGKQVTVQNLQVL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVR 207
VD+++ L++VKG VPGA KNS++++R
Sbjct: 179 KVDEEQNLLVVKGAVPGA-KNSYVIIR 204
>gi|121608243|ref|YP_996050.1| 50S ribosomal protein L3 [Verminephrobacter eiseniae EF01-2]
gi|166234606|sp|A1WHC5|RL3_VEREI RecName: Full=50S ribosomal protein L3
gi|121552883|gb|ABM57032.1| LSU ribosomal protein L3P [Verminephrobacter eiseniae EF01-2]
Length = 224
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 86/219 (39%), Positives = 127/219 (57%), Gaps = 4/219 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GM ++ +G +PVTV+ + + +V +T + +GY+A+QV G K V
Sbjct: 6 SLGLLGRKVGMMRLFTDDGDAVPVTVVDVSDNRVTQVKTQENDGYVALQVTFGARKASRV 65
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP--SYFTVGQLVDVTGMTIGKG 119
SKP G + V + + EFRV D S F+VGQ VDV G +IGKG
Sbjct: 66 SKPEAGHLAKAGVQAGEIIQEFRVSADTAAQYQAGASVAITSVFSVGQKVDVQGTSIGKG 125
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KRHN RA+HG S SH GS G QDPGRVF K+M G +G T +NL++
Sbjct: 126 YAGTIKRHNMRSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDATRTTQNLDL 185
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+ +D+ R L+L+KG +PG+ K ++ VR + +S KG
Sbjct: 186 IRIDEARQLLLIKGAIPGS-KGGFVTVRPAVRSQA-AKG 222
>gi|296137306|ref|YP_003644548.1| 50S ribosomal protein L3 [Thiomonas intermedia K12]
gi|295797428|gb|ADG32218.1| 50S ribosomal protein L3 [Thiomonas intermedia K12]
Length = 220
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 98/211 (46%), Positives = 133/211 (63%), Gaps = 2/211 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G+V RK+GMT V+ +G I VTVL +V RT D +GY AVQV G K ++K
Sbjct: 7 GLVTRKVGMTRVFTDDGASIAVTVLDASGNRVSQVRTQDVDGYSAVQVAYGSRKPSRLTK 66
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
G + V P + L EF + + +G+ S F VGQ+VD G++IGKGF+G
Sbjct: 67 GQAGHLAKAGVEPAEILKEFDLPAEKAADYALGATVPASLFQVGQMVDAQGVSIGKGFAG 126
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
++KRHNF RA+HG S++ R+ GS G QDPGRVF K+MAG+MG VTV+NLEVV +
Sbjct: 127 SIKRHNFSSNRASHGNSVTTRAPGSIGMAQDPGRVFPGKRMAGQMGNETVTVQNLEVVRI 186
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D+ R LILVKG VPG++ ++ +R + KSA
Sbjct: 187 DEARQLILVKGAVPGSRSG-FVFLRPAVKSA 216
>gi|209884813|ref|YP_002288670.1| ribosomal protein L3 [Oligotropha carboxidovorans OM5]
gi|226730542|sp|B6JET3|RL3_OLICO RecName: Full=50S ribosomal protein L3
gi|209873009|gb|ACI92805.1| ribosomal protein L3 [Oligotropha carboxidovorans OM5]
Length = 243
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 127/218 (58%), Positives = 156/218 (71%), Gaps = 2/218 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GM V+ G IPVTVL L NCQVV HRT DKNGY A+Q+GAG K
Sbjct: 1 MRSGVIAQKVGMMRVFTEAGEHIPVTVLKLGNCQVVGHRTKDKNGYTALQLGAGARKSVY 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+ K RG F+ V PK+K+ EFRV + D ++PVG+ +F VGQ VDVTG +IGKG+
Sbjct: 61 MPKAERGQFAVAKVEPKRKVAEFRVSE-DAIIPVGAEIQADHFVVGQFVDVTGTSIGKGY 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR NFGGLRATHGVS+SHRS GSTG RQDPG+ FKNKKM G MG +R+T NL VV
Sbjct: 120 AGGMKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKKMPGHMGVDRITTLNLRVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
D +RGL+LV+G VPG+ K WI VRD+ K + +
Sbjct: 180 QTDVERGLLLVEGAVPGS-KGGWITVRDAVKKPLPKEA 216
>gi|310779596|ref|YP_003967929.1| LSU ribosomal protein L3P [Ilyobacter polytropus DSM 2926]
gi|309748919|gb|ADO83581.1| LSU ribosomal protein L3P [Ilyobacter polytropus DSM 2926]
Length = 208
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 88/209 (42%), Positives = 125/209 (59%), Gaps = 3/209 (1%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++A+K+GMT ++ G+ +PVTV+ V+ +T +K+GY A+Q+G E K KN +K
Sbjct: 3 GILAKKIGMTQIF-ENGKFVPVTVVEAGPNFVLQKKTEEKDGYTALQLGFDEKKEKNTTK 61
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
PM G F+ V P + + E + + +G + VD+ G + GKG +G
Sbjct: 62 PMMGIFNKAGVKPLRFVRELKADSVEG-YELGQEIKVDILDGVEFVDIKGTSKGKGTAGV 120
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
MKRHNF G RATHGVS +HR GS G P +V K KMAGR G VTV+NL+VV VD
Sbjct: 121 MKRHNFSGNRATHGVSRNHRLGGSIGQSSFPSKVLKGLKMAGRYGNAAVTVQNLKVVKVD 180
Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+ L+L+KG VPG KN +I+V+ + K
Sbjct: 181 VENNLLLIKGAVPGP-KNGYIVVKPAIKK 208
>gi|160881785|ref|YP_001560753.1| ribosomal protein L3 [Clostridium phytofermentans ISDg]
gi|189042839|sp|A9KJJ4|RL3_CLOPH RecName: Full=50S ribosomal protein L3
gi|160430451|gb|ABX44014.1| ribosomal protein L3 [Clostridium phytofermentans ISDg]
Length = 211
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 96/214 (44%), Positives = 126/214 (58%), Gaps = 3/214 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++A K+GMT ++N G PVTVL C V +T+D +GY AVQVG G+ +
Sbjct: 1 MKKAILATKIGMTQIFNENGVLTPVTVLQAGPCAVTQVKTVDNDGYAAVQVGFGDIRETL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP +G F+ V+ K+ L EFR + D VG FT G +D TG + GKGF
Sbjct: 61 VNKPQKGHFAKAGVANKRFLKEFRFENAAD-YTVGQEIKVDIFTAGDKIDATGTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH HG S HR GS G PGRVFK K M G+MG +VTV+NLEVV
Sbjct: 120 QGAIKRHGLSRGPMGHG-SKFHRHAGSNGAATTPGRVFKGKHMPGQMGNVKVTVQNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
+D LILVKG VPG KK + I+++++ KS
Sbjct: 179 KIDVDNNLILVKGAVPGPKK-AMIMLKETVKSGK 211
>gi|163752917|ref|ZP_02160041.1| 50S ribosomal protein L3 [Kordia algicida OT-1]
gi|161326649|gb|EDP97974.1| 50S ribosomal protein L3 [Kordia algicida OT-1]
Length = 205
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 85/208 (40%), Positives = 125/208 (60%), Gaps = 4/208 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT +++ G+ IP TV+ C V RT + +GY A+Q+G + K
Sbjct: 1 MSGLIGKKIGMTSIFDENGKNIPCTVIEAGPCVVTQVRTNEVDGYEALQLGFDDKAEKRA 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SK G F SPK K+ EF+ +++ +G + +F G+ VDV G + GKGF
Sbjct: 61 SKAANGHFKKAGTSPKYKVVEFQGFEEE--YKLGDSITVEHFEEGEFVDVAGTSKGKGFQ 118
Query: 122 GAMKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH F G +ATHG R+ GS G P RVFK +MAGRMGG +V V+NL V+
Sbjct: 119 GVVKRHGFGGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGRMGGEKVKVQNLRVL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
V ++ L++VKGCVPG KN++++V+
Sbjct: 179 KVVPEKNLLVVKGCVPG-HKNAYVIVQK 205
>gi|261854950|ref|YP_003262233.1| 50S ribosomal protein L3 [Halothiobacillus neapolitanus c2]
gi|261835419|gb|ACX95186.1| 50S ribosomal protein L3 [Halothiobacillus neapolitanus c2]
Length = 214
Score = 212 bits (540), Expect = 3e-53, Method: Composition-based stats.
Identities = 93/212 (43%), Positives = 125/212 (58%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M GVV RK+GMT V++ G PVTV+ ++ +V +T + +GY AVQV G +
Sbjct: 1 MSLGVVGRKVGMTRVFDDAGVSTPVTVIEVEPNRVTQLKTPEVDGYTAVQVTTGTRRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+K M G ++ + + EFR+ D+ G+ + S F + VDV G + GKG
Sbjct: 61 VTKAMAGHYAKAETASGRMSTEFRISADELAGFQPGAEITVSIFDGVEKVDVAGQSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G +KR+NF ATHG S SHR GS G Q PGRVF KKM+G MG RV+ L+V
Sbjct: 121 FAGTVKRYNFRTQDATHGNSRSHRVPGSIGQNQTPGRVFPGKKMSGHMGDERVSSLGLKV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
V VD +RGLILVKG VPG+ ++VR S K
Sbjct: 181 VRVDVERGLILVKGAVPGS-TGGDVIVRPSVK 211
>gi|326332191|ref|ZP_08198471.1| 50S ribosomal protein L3 [Nocardioidaceae bacterium Broad-1]
gi|325949897|gb|EGD41957.1| 50S ribosomal protein L3 [Nocardioidaceae bacterium Broad-1]
Length = 218
Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats.
Identities = 89/210 (42%), Positives = 123/210 (58%), Gaps = 2/210 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT +++ +PVTV+ + V RT + +GY AVQ+G GE + V+
Sbjct: 8 KGLLGTKLGMTQLWDENNVVVPVTVIAANTNVVTQVRTPEVDGYNAVQIGYGEIDGRKVN 67
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP G F +P++ L E R D G S F VG+ +DVTG + GKGF+G
Sbjct: 68 KPGAGQFEKAGTTPRRHLAEIR-TADAASYSAGQELSVDTFAVGEEIDVTGTSKGKGFAG 126
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F G+ A+HG +HR GS G PGRVFK +MAG MG + VT +NL V +V
Sbjct: 127 TMKRHGFAGVSASHGAHRNHRKPGSIGACATPGRVFKGVRMAGHMGTDTVTTQNLTVHAV 186
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
D ++GLILVKG +PG K +++R + K
Sbjct: 187 DTEKGLILVKGAIPGP-KGGLVVLRSAAKK 215
>gi|86357305|ref|YP_469197.1| 50S ribosomal protein L3 [Rhizobium etli CFN 42]
gi|109893545|sp|Q2K9L6|RL3_RHIEC RecName: Full=50S ribosomal protein L3
gi|86281407|gb|ABC90470.1| 50S ribosomal protein L3 [Rhizobium etli CFN 42]
Length = 213
Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats.
Identities = 147/215 (68%), Positives = 172/215 (80%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT VYN G +PVTVL +D CQVV RT++KNGY AVQ+GAG+AKVKN
Sbjct: 1 MRSGVIAQKVGMTRVYNDAGEHVPVTVLRMDGCQVVATRTVEKNGYTAVQLGAGQAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SK MRG F+ NV PK KL EFRV + D+LL +G+ +F GQLVDVTG TIGKGF
Sbjct: 61 TSKAMRGNFAVANVEPKAKLAEFRVSE-DNLLEIGTELKADHFAAGQLVDVTGTTIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRH FGGLRATHGVS+SHRSHGSTG RQDPG+VFKNKKMAG MG RVT +NLEVV
Sbjct: 120 AGAMKRHGFGGLRATHGVSVSHRSHGSTGSRQDPGKVFKNKKMAGHMGQTRVTTQNLEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
S D+ RGLIL+KG VPG+ K +WI+VRD+ KSA
Sbjct: 180 STDEDRGLILIKGAVPGS-KGAWIIVRDAVKSAAK 213
>gi|299473316|emb|CBN77715.1| Ribosomal protein L3 [Ectocarpus siliculosus]
Length = 369
Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats.
Identities = 107/212 (50%), Positives = 139/212 (65%), Gaps = 2/212 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
RSG +A K+G +++ G R PVTVL LD C+VV +T + +GY ++Q+G GE K KNV
Sbjct: 117 RSGALAMKVGSMAIFDSWGVRHPVTVLQLDECEVVQVKTTETDGYTSLQLGVGERKTKNV 176
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP F V+PK+KL EFRV + LLPVG +F GQ VDV G + GKGF
Sbjct: 177 NKPDAERFRRAGVNPKRKLMEFRVSA-EALLPVGFQLRAQHFVAGQKVDVCGTSKGKGFQ 235
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR F G RA+HGVS + R GSTG QDPGRVFK KKM GRMG +RVTV+NL+++
Sbjct: 236 GGMKRWGFKGQRASHGVSKTPRHIGSTGQCQDPGRVFKGKKMPGRMGTDRVTVQNLKILK 295
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+D R L+ V+G VPG + ++ V D+ K A
Sbjct: 296 MDPVRELLFVRGHVPG-QNGGFVRVTDAIKGA 326
>gi|319654868|ref|ZP_08008943.1| 50S ribosomal protein L3 [Bacillus sp. 2_A_57_CT2]
gi|317393431|gb|EFV74194.1| 50S ribosomal protein L3 [Bacillus sp. 2_A_57_CT2]
Length = 208
Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats.
Identities = 87/212 (41%), Positives = 127/212 (59%), Gaps = 4/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ G IPVTV+ V+ ++++ +GY A+Q+G + + K
Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVVEAAPNVVLQMKSVETDGYEAIQLGFEDKREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EFR D VG F G+ VDVTG++ GKGF
Sbjct: 61 SNKPEKGHVAKANTAPKRFVREFRG-ADLGQYEVGQEVKVDIFAEGETVDVTGISKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH HG S HR GS G P RVFK K + GRMGG ++TV+NLE+V
Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKLLPGRMGGEQITVQNLEIV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPGA+K + + ++ + K+
Sbjct: 178 KVDAERNLLLIKGNVPGARK-ALVKIKSAVKA 208
>gi|295694837|ref|YP_003588075.1| 50S ribosomal protein L3 [Bacillus tusciae DSM 2912]
gi|295410439|gb|ADG04931.1| 50S ribosomal protein L3 [Bacillus tusciae DSM 2912]
Length = 210
Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats.
Identities = 91/214 (42%), Positives = 130/214 (60%), Gaps = 4/214 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RKLGMT V+ +GR +PVTV+ C V+ +T++ +GY+A+Q+G + K +
Sbjct: 1 MKGILGRKLGMTQVFREDGRVVPVTVIEAGPCIVLQKKTVETDGYVAIQLGFADKKGRRA 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
++P G + +PKK + E R D VG F G+LVDVTG + GKG++
Sbjct: 61 NRPETGHAAKSGATPKKYIREIRNV-DIAKYEVGQELRADVFAPGELVDVTGTSKGKGYA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRHN HG S HR GS G P RVFK + + GRMGG RVTV+NLEV+
Sbjct: 120 GTIKRHNQARGPMAHG-SKYHRGVGSLGSIA-PNRVFKGQTLPGRMGGERVTVQNLEVIQ 177
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D +R L+LVKG VPG +NS+++V+ + K+AV
Sbjct: 178 ADPERNLLLVKGAVPGP-RNSYVIVKSAVKAAVK 210
>gi|186684510|ref|YP_001867706.1| 50S ribosomal protein L3 [Nostoc punctiforme PCC 73102]
gi|226730541|sp|B2ITQ5|RL3_NOSP7 RecName: Full=50S ribosomal protein L3
gi|186466962|gb|ACC82763.1| ribosomal protein L3 [Nostoc punctiforme PCC 73102]
Length = 210
Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats.
Identities = 82/210 (39%), Positives = 123/210 (58%), Gaps = 3/210 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ KLGMT +++ G IPVTV+ C V +T +GY A+QVG GE K K
Sbjct: 1 MSVGILGTKLGMTQIFDEAGVAIPVTVIQAGPCTVTQVKTKQTDGYFAIQVGFGEVKPKA 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+++P+ G + + + L E+ D +G F+ GQ+VDV G +IG+GF
Sbjct: 61 LNRPLLGHLAKSSAPALRHLNEYHTDSSSD-YALGQQIKADIFSEGQIVDVVGTSIGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G KR+NFG +HG S +HR+ GS G PGRV+ K+MAGR+GG R+T++ L +V
Sbjct: 120 AGNQKRNNFGRGPMSHG-SKNHRAPGSIGAGTTPGRVYPGKRMAGRLGGKRITIRKLTIV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
VD +R L+L+KG +PG + + V +
Sbjct: 179 RVDAERNLLLIKGAIPGKP-GALVSVVPAK 207
>gi|148273801|ref|YP_001223362.1| 50S ribosomal protein L3 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|212288254|sp|A5CUB3|RL3_CLAM3 RecName: Full=50S ribosomal protein L3
gi|147831731|emb|CAN02700.1| 50S ribosomal protein L3 [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
Length = 217
Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats.
Identities = 92/211 (43%), Positives = 124/211 (58%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
+G++ KLGMT V++ + IPVTV+ + V RT + +GY A+Q+ G+ +
Sbjct: 9 TGLLGTKLGMTQVWDENNKLIPVTVVQITPNVVTQVRTPEVDGYGAIQIAYGQIDPRKAD 68
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP G F V+P++ L E R D +G + F G VDV G + GKGF+G
Sbjct: 69 KPSTGHFDKAGVTPRRHLTEVR-TADFAEYALGQEITVGAFEPGTKVDVVGTSKGKGFAG 127
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRHNF G+ A+HG +HR GS G P RVFK +MAGRMGG RVTV NL V SV
Sbjct: 128 VMKRHNFKGVSASHGSHRNHRKPGSIGASSTPSRVFKGMRMAGRMGGERVTVLNLVVHSV 187
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D ++GL+LVKG VPGA + + VR++ K
Sbjct: 188 DAEKGLLLVKGAVPGA-RGRIVFVRNAVKGK 217
>gi|330814199|ref|YP_004358438.1| LSU ribosomal protein L3p (L3e) [Candidatus Pelagibacter sp.
IMCC9063]
gi|327487294|gb|AEA81699.1| LSU ribosomal protein L3p (L3e) [Candidatus Pelagibacter sp.
IMCC9063]
Length = 272
Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats.
Identities = 95/216 (43%), Positives = 135/216 (62%), Gaps = 2/216 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR G+V +K+GMT + G +PVTVL ++ ++V DK GY A+ VG G K
Sbjct: 1 MRLGLVGKKIGMTQKFYESGEAVPVTVLQVEPGKIVEVIEKDKRGYSALLVGYGHIKSSK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++K M+GF++ ++ KK L E+RV+ ++ + + VD+ TIGKGF
Sbjct: 61 LTKSMKGFYAKKSLEAKKFLKEYRVENTEEFKAGSD-VTLDILKDKKYVDIRSKTIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR NFGGLRATHGVS+SHRSHGSTG RQDPG+VFK KKMAG MG T++ LE+V
Sbjct: 120 AGVMKRWNFGGLRATHGVSVSHRSHGSTGQRQDPGKVFKGKKMAGHMGDKFRTMQGLEIV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
D L+ ++G VPG+ KN+++ + ++ K
Sbjct: 180 EADLVNNLLYLRGSVPGS-KNAYVEITEAVKKKNKS 214
>gi|78484640|ref|YP_390565.1| ribosomal protein L3 [Thiomicrospira crunogena XCL-2]
gi|109893569|sp|Q31IY2|RL3_THICR RecName: Full=50S ribosomal protein L3
gi|78362926|gb|ABB40891.1| LSU ribosomal protein L3P [Thiomicrospira crunogena XCL-2]
Length = 212
Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats.
Identities = 93/213 (43%), Positives = 127/213 (59%), Gaps = 3/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M GV+ K+GMT V+N +G PVTV+ + ++ + + +GY A+QV G
Sbjct: 1 MGIGVIGTKVGMTRVFNEDGVSTPVTVVEVSPNRITQIKNNETDGYDAIQVTFGSKHAGR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQ--KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
VSKP G ++ V + L+EFR+ + + L GS + F +VDV+G T GK
Sbjct: 61 VSKPEAGHYAKAGVEAGQGLWEFRLDDVSEVEGLEPGSEITVEKFNDVAVVDVSGTTKGK 120
Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
GF G +KRHNF ATHG S+SHR+ GS G Q PGRVFK KKMAG MG + T NLE
Sbjct: 121 GFQGGVKRHNFKMQDATHGNSVSHRAPGSIGQNQTPGRVFKGKKMAGHMGNVKQTTLNLE 180
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+V VD + L+L+KG +PGA K S ++VR + K
Sbjct: 181 LVKVDVENSLLLIKGALPGA-KGSTVIVRKAIK 212
>gi|313884599|ref|ZP_07818360.1| 50S ribosomal protein L3 [Eremococcus coleocola ACS-139-V-Col8]
gi|312620383|gb|EFR31811.1| 50S ribosomal protein L3 [Eremococcus coleocola ACS-139-V-Col8]
Length = 210
Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats.
Identities = 84/212 (39%), Positives = 122/212 (57%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT + G IPVTV+ V+ ++L+ +GY AVQ+G + +
Sbjct: 1 MTKGILGKKVGMTQYFTENGELIPVTVVEATPNVVLQVKSLENDGYEAVQLGYQDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EFR + VG + F G ++DVTG + GKGF
Sbjct: 61 ATKPHKGHVAKANATPKRFIREFRNVELGS-FEVGQEITVETFEAGDIIDVTGTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH HG S HR GS G D +VFK K + G+ GG +VT++NLEVV
Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGMASDASKVFKGKNLPGQTGGEQVTIQNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+V + LIL+KG VPG KK S + +R + KS
Sbjct: 179 AVVAEDNLILIKGNVPGPKK-SLVEIRTAVKS 209
>gi|241765217|ref|ZP_04763200.1| ribosomal protein L3 [Acidovorax delafieldii 2AN]
gi|241365097|gb|EER59976.1| ribosomal protein L3 [Acidovorax delafieldii 2AN]
Length = 224
Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats.
Identities = 84/220 (38%), Positives = 126/220 (57%), Gaps = 3/220 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GM ++ +G +PVTV+ + N +V +T + +GY+A+QV G K V
Sbjct: 6 SLGLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQVKTQENDGYVALQVTFGSRKASRV 65
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVG--SVFSPSYFTVGQLVDVTGMTIGKG 119
+KP G + V + + EFRV + +V F VGQ VDV G +IGKG
Sbjct: 66 TKPEAGHLAKAGVEAGEIIQEFRVTAETAGKYAAGAAVPVADVFAVGQKVDVQGTSIGKG 125
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KRHN RA+HG S SH GS G QDPGRVF K+M G +G T +NL+V
Sbjct: 126 YAGTIKRHNMSSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTKTTQNLDV 185
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
+ +D+ R L+L+KG +PG+ K ++ VR + K+ +
Sbjct: 186 IRIDEARQLLLIKGAIPGS-KGGFVTVRPAVKAKASKGAN 224
>gi|302877801|ref|YP_003846365.1| 50S ribosomal protein L3 [Gallionella capsiferriformans ES-2]
gi|302580590|gb|ADL54601.1| 50S ribosomal protein L3 [Gallionella capsiferriformans ES-2]
Length = 214
Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats.
Identities = 100/213 (46%), Positives = 131/213 (61%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT V+ +G +PVTVL + N +V +++ +GY AVQV G +
Sbjct: 1 MSLGLVGRKIGMTRVFTEDGSSLPVTVLEVSNNRVTQVKSVAVDGYTAVQVAHGVRRATR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
VSK G ++ V L EF V + D L +GS S F VGQLVDVTG T GKG
Sbjct: 61 VSKAAAGHYAKAGVEAGSALKEFIVTPEQLDGLALGSSISVEIFQVGQLVDVTGTTKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KRH+F RA+HG S SH GS G QDPGRVF K+M G +G + TV+NL++
Sbjct: 121 YAGTIKRHHFKSGRASHGNSKSHNVPGSIGMAQDPGRVFPGKRMTGHLGDEQRTVQNLQI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD R L+LVKG VPG NS I+VR + K+
Sbjct: 181 VRVDVARQLLLVKGAVPGC-TNSKIIVRPAVKA 212
>gi|302553542|ref|ZP_07305884.1| 50S ribosomal protein L3 [Streptomyces viridochromogenes DSM 40736]
gi|302471160|gb|EFL34253.1| 50S ribosomal protein L3 [Streptomyces viridochromogenes DSM 40736]
Length = 214
Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats.
Identities = 97/211 (45%), Positives = 127/211 (60%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT V++ R +PVTV+ V RT D +GY +VQ+ GE + V+
Sbjct: 6 KGILGEKLGMTQVWDANNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVN 65
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP++G FS +V+P++ L E R D +G + F G VDVTG + GKGF+G
Sbjct: 66 KPLKGHFSKADVTPRRHLVEIR-TADASEYTLGQEITAEVFEAGVKVDVTGKSKGKGFAG 124
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRHNF GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +V
Sbjct: 125 VMKRHNFRGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D ++GL+L+KG VPG +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214
>gi|170780733|ref|YP_001709065.1| 50S ribosomal protein L3 [Clavibacter michiganensis subsp.
sepedonicus]
gi|212288255|sp|B0RB39|RL3_CLAMS RecName: Full=50S ribosomal protein L3
gi|169155301|emb|CAQ00404.1| 50S ribosomal protein L3 [Clavibacter michiganensis subsp.
sepedonicus]
Length = 217
Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats.
Identities = 92/211 (43%), Positives = 124/211 (58%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
+G++ KLGMT V++ + IPVTV+ + V RT + +GY A+Q+ G+ +
Sbjct: 9 TGLLGTKLGMTQVWDENNKLIPVTVVQITPNVVTQVRTPEVDGYGAIQIAYGQIDPRKAD 68
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP G F V+P++ L E R D +G + F G VDV G + GKGF+G
Sbjct: 69 KPSTGHFDKAGVTPRRHLTEVR-TADFAEYTLGQEITVGAFEPGTKVDVVGTSKGKGFAG 127
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRHNF G+ A+HG +HR GS G P RVFK +MAGRMGG RVTV NL V SV
Sbjct: 128 VMKRHNFKGVSASHGSHRNHRKPGSIGASSTPSRVFKGMRMAGRMGGERVTVLNLVVHSV 187
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D ++GL+LVKG VPGA + + VR++ K
Sbjct: 188 DAEKGLLLVKGAVPGA-RGRIVFVRNAVKGK 217
>gi|121592712|ref|YP_984608.1| 50S ribosomal protein L3 [Acidovorax sp. JS42]
gi|222109493|ref|YP_002551757.1| 50S ribosomal protein l3 [Acidovorax ebreus TPSY]
gi|166233110|sp|A1W2Q7|RL3_ACISJ RecName: Full=50S ribosomal protein L3
gi|254803670|sp|B9MB73|RL3_DIAST RecName: Full=50S ribosomal protein L3
gi|120604792|gb|ABM40532.1| LSU ribosomal protein L3P [Acidovorax sp. JS42]
gi|221728937|gb|ACM31757.1| ribosomal protein L3 [Acidovorax ebreus TPSY]
Length = 224
Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats.
Identities = 90/220 (40%), Positives = 129/220 (58%), Gaps = 3/220 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GM ++ +G +PVTV+ + N +V +T + +GY+++QV G K V
Sbjct: 6 SLGLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQVKTQENDGYVSLQVTFGSRKASRV 65
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVG--SVFSPSYFTVGQLVDVTGMTIGKG 119
+KP G + V + + EFRV + +V F VGQ VDV G +IGKG
Sbjct: 66 TKPEAGHLAKAGVEAGEIIREFRVTPEVAGKYAAGAAVPVADVFAVGQKVDVQGTSIGKG 125
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G +KRHNFG RA+HG S SH GS G QDPGRVF KKM G +G VT +NL+V
Sbjct: 126 FAGTIKRHNFGSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKKMTGHLGDVTVTTQNLDV 185
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
V +D+ R L+L+KG VPG+ K ++ VR + K+ +
Sbjct: 186 VRIDEARQLLLIKGAVPGS-KGGFVTVRPAVKAQASKGAN 224
>gi|329938232|ref|ZP_08287683.1| 50S ribosomal protein L3 [Streptomyces griseoaurantiacus M045]
gi|329302721|gb|EGG46611.1| 50S ribosomal protein L3 [Streptomyces griseoaurantiacus M045]
Length = 214
Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats.
Identities = 95/211 (45%), Positives = 127/211 (60%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT V++ R +PVTV+ V RT D +GY +VQ+ G+ + V+
Sbjct: 6 KGILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVRTNDADGYESVQIAFGDIDPRKVN 65
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP++G F+ +V+P++ L E R D +G + F G VDVTG + GKGF+G
Sbjct: 66 KPLKGHFAKADVTPRRHLVEIR-TADAAEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAG 124
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRHNF GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +V
Sbjct: 125 VMKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D ++GL+L+KG VPG +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214
>gi|297717842|gb|ADI50064.1| LSU ribosomal protein L3p [Candidatus Odyssella thessalonicensis
L13]
Length = 213
Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats.
Identities = 115/214 (53%), Positives = 155/214 (72%), Gaps = 3/214 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD-KNGYMAVQVGAGEAKVK 59
MR+G++A K+GMT + +G +PVTVL + +C VV +T D K+GY AVQ+G+ +AK+
Sbjct: 1 MRTGLIAEKVGMTQFFAADGTLVPVTVLQVSDCVVVGKKTADSKDGYNAVQIGSNKAKIN 60
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
NV+KPMR FF+ + P+ L EFRV ++LL G+ +F GQ VDVTG +IGKG
Sbjct: 61 NVTKPMREFFAKKEIEPRAHLKEFRVSS-ENLLEPGAELKADHFAAGQFVDVTGTSIGKG 119
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+GAMKRHNFGGLRA+HGVS++HRSHGSTG RQDPG+VFKNKKMAG MG RVT NL +
Sbjct: 120 FAGAMKRHNFGGLRASHGVSVTHRSHGSTGNRQDPGKVFKNKKMAGHMGARRVTKMNLTI 179
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+D ++ LI ++G VPG++ + VRD+ K +
Sbjct: 180 YGIDAEKNLIFIRGSVPGSQ-GGIVYVRDAIKKS 212
>gi|291518045|emb|CBK73266.1| LSU ribosomal protein L3P [Butyrivibrio fibrisolvens 16/4]
Length = 227
Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats.
Identities = 92/230 (40%), Positives = 120/230 (52%), Gaps = 19/230 (8%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK--- 57
M+ ++A K+GMT V+N G IPVTVL C V +T++ +GY AVQVG + K
Sbjct: 1 MKKAILATKVGMTQVFNEGGELIPVTVLSAGPCVVTQIKTVENDGYDAVQVGFVDKKVKL 60
Query: 58 -------------VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
V+KP +G F V PK+ + EFR D + F
Sbjct: 61 VNKDANGRKEIIHRNGVNKPEKGHFDKAGVEPKRFVREFRFDNCAD-YALAQEIKADIFE 119
Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
G VD T + GKGF GA+KR HG S HR GS G P RVFK K M
Sbjct: 120 AGDKVDATATSKGKGFQGAIKRLGQHRGPMAHG-SKFHRHQGSNGACSSPSRVFKGKGMP 178
Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
G+MGG RVT++NLE+V VD + L+LVKG VPG KK S + +++S K+
Sbjct: 179 GQMGGTRVTIQNLEIVRVDVENNLLLVKGAVPGPKK-SLVTIKESVKAGK 227
>gi|261409521|ref|YP_003245762.1| 50S ribosomal protein L3 [Paenibacillus sp. Y412MC10]
gi|329922035|ref|ZP_08277828.1| 50S ribosomal protein L3 [Paenibacillus sp. HGF5]
gi|261285984|gb|ACX67955.1| 50S ribosomal protein L3 [Paenibacillus sp. Y412MC10]
gi|328942418|gb|EGG38682.1| 50S ribosomal protein L3 [Paenibacillus sp. HGF5]
Length = 207
Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats.
Identities = 84/211 (39%), Positives = 117/211 (55%), Gaps = 4/211 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RKLGMT V+ EG IPVTV+ C V+ + L+ +GY A+QVG + K
Sbjct: 1 MKGILGRKLGMTQVFTPEGVVIPVTVIEAGPCVVLQKKDLENDGYEAIQVGFSDKKENRS 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G N +PK+ + E R + VG F G+ VDVTG++ GKGF
Sbjct: 61 NKPEAGHAKKANTAPKRYVREIRGVDLAS-VEVGQELKADVFAEGEFVDVTGISKGKGFQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR +HG S HR GS G Q RV K K++ G MG VT++ LEVV
Sbjct: 120 GVIKRWGQSRGPMSHG-SRYHRRPGSMGSIQ-ANRVPKGKRLPGHMGNETVTIQKLEVVK 177
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R +ILVKG +PG KK ++ ++++ K
Sbjct: 178 VDAERNVILVKGSIPGPKKG-FVQIKETVKK 207
>gi|19704966|ref|NP_602461.1| 50S ribosomal protein L3 [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|42559658|sp|Q8RIF5|RL3_FUSNN RecName: Full=50S ribosomal protein L3
gi|19712868|gb|AAL93760.1| LSU ribosomal protein L3P [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
Length = 211
Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats.
Identities = 90/213 (42%), Positives = 134/213 (62%), Gaps = 3/213 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT ++ +G+ +PVTV+ V+ +T +K+GY+A+Q+G E K KN
Sbjct: 1 MSGILGKKIGMTQIF-EDGKFVPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNT 59
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+ G F+ V P++ + E V+ D +G T VD+TG + GKG S
Sbjct: 60 TKPLMGIFNKAGVKPQRFVKELEVESVDG-YELGQEIKVDVLTEVGYVDITGTSKGKGTS 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MK+H F G RA+HGVS +HR GS G PG+V K KKMAG+ G VTV+NL+VV
Sbjct: 119 GVMKKHGFSGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKKMAGQHGNATVTVQNLKVVK 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VD + L+L+KG VPGA KNS+++++ + K +
Sbjct: 179 VDAEHNLLLIKGAVPGA-KNSYLVIKPAVKKVI 210
>gi|87300913|ref|ZP_01083755.1| 50S ribosomal protein L3 [Synechococcus sp. WH 5701]
gi|87284784|gb|EAQ76736.1| 50S ribosomal protein L3 [Synechococcus sp. WH 5701]
Length = 215
Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats.
Identities = 82/216 (37%), Positives = 123/216 (56%), Gaps = 3/216 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGM+ ++ G+ IPVTV+ C++ +T +GY A Q+G GE + K
Sbjct: 1 MSFGILGKKLGMSQFFDPNGKSIPVTVIEAGPCRITQLKTPATDGYSAAQIGFGETRDKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP G + + L E+R++ D L S + F GQ VDV+G T+G+GF
Sbjct: 61 VNKPAAGHLAKSGDELLRHLQEYRLESLDGLELGAS-ITVEAFEAGQKVDVSGDTVGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
SG KRH F +HG S +HR GSTG PGRV+ K+MAGR GG ++T + L ++
Sbjct: 120 SGYQKRHGFSRGPMSHG-SKNHREPGSTGAGTTPGRVYPGKRMAGRYGGKQITTRGLTIL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
VD +R L++VKG VPG + + +R + +
Sbjct: 179 KVDHERNLLVVKGSVPGKP-GALLSIRPALRVGAKA 213
>gi|325916487|ref|ZP_08178756.1| LSU ribosomal protein L3P [Xanthomonas vesicatoria ATCC 35937]
gi|325537276|gb|EGD09003.1| LSU ribosomal protein L3P [Xanthomonas vesicatoria ATCC 35937]
Length = 216
Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats.
Identities = 93/212 (43%), Positives = 128/212 (60%), Gaps = 2/212 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G V RK GM+ V+ +GR +PVT++ ++ +T++ +GY AVQ+ G + V
Sbjct: 6 SLGFVGRKAGMSRVFTEDGRSVPVTLIEATPNRIAQIKTVETDGYSAVQITVGARRAALV 65
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP G F+ V + L+EFRV+ VG F VGQ VDV G+T GKGF
Sbjct: 66 NKPAAGHFAKAKVEAGRGLWEFRVEDAQLGDFAVGGEIKADIFEVGQKVDVQGVTKGKGF 125
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR+NF ATHG S+SHR+ GS G RQ PGRVF KKM+G MG + + +NLEVV
Sbjct: 126 QGTIKRYNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVQQSTQNLEVV 185
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +RGLI ++G VPGA ++VR + K+
Sbjct: 186 KVDVERGLIAIRGAVPGAA-GGDVIVRPASKA 216
>gi|296329220|ref|ZP_06871721.1| 50S ribosomal protein L3 [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
gi|296153576|gb|EFG94393.1| 50S ribosomal protein L3 [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
Length = 211
Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats.
Identities = 90/213 (42%), Positives = 134/213 (62%), Gaps = 3/213 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT ++ +G+ +PVTV+ V+ +T +K+GY+A+Q+G E K KN
Sbjct: 1 MSGILGKKIGMTQIF-EDGKFVPVTVVEAGPNFVLQKKTEEKDGYVALQLGFDEKKEKNT 59
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+ G F+ V P++ + E V+ D +G T VD+TG + GKG S
Sbjct: 60 TKPLMGIFNKAGVKPQRFVKELEVESVDG-YELGQEIKVDVLTEVGYVDITGTSKGKGTS 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MK+H F G RA+HGVS +HR GS G PG+V K KKMAG+ G VTV+NL+VV
Sbjct: 119 GVMKKHGFAGNRASHGVSRNHRLGGSIGMSSWPGKVLKGKKMAGQHGNATVTVQNLKVVK 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VD + L+L+KG VPGA KNS+++++ + K +
Sbjct: 179 VDAEHNLLLIKGAVPGA-KNSYLVIKPAVKKVI 210
>gi|159901426|ref|YP_001547673.1| 50S ribosomal protein L3 [Herpetosiphon aurantiacus ATCC 23779]
gi|226726278|sp|A9B412|RL3_HERA2 RecName: Full=50S ribosomal protein L3
gi|159894465|gb|ABX07545.1| ribosomal protein L3 [Herpetosiphon aurantiacus ATCC 23779]
Length = 212
Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats.
Identities = 96/215 (44%), Positives = 133/215 (61%), Gaps = 3/215 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M +G++ RK+GMT ++ +G IPVTV+ C V RT DK+GY AVQ+G GE K +
Sbjct: 1 MLNGILGRKIGMTQIFTEKGETIPVTVIEAGPCVVTQLRTKDKDGYEAVQLGFGEIKPRK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP++G + + D + VG V + F +G+ +DV G + G+GF
Sbjct: 61 VTKPIQGHLKAAGR--LVRFMREVKTTDLNAHNVGDVVNVDIFQIGEKIDVVGTSKGRGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KRH F G ATHG S HR+ GS G PGRV+KN +MAGRMG +RVTV+NLEVV
Sbjct: 119 AGVVKRHGFRGGPATHGQSDRHRAPGSIGSGTTPGRVWKNMRMAGRMGNDRVTVQNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
+D +R +ILVKG VPGA KN ++V + K+
Sbjct: 179 KIDLERHVILVKGSVPGA-KNGLVMVSRAAKATKK 212
>gi|294101628|ref|YP_003553486.1| 50S ribosomal protein L3 [Aminobacterium colombiense DSM 12261]
gi|293616608|gb|ADE56762.1| 50S ribosomal protein L3 [Aminobacterium colombiense DSM 12261]
Length = 208
Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats.
Identities = 105/206 (50%), Positives = 135/206 (65%), Gaps = 2/206 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RKLGMT +YN G+ +PVTV+ C VV +T +KNGY AVQ+G GE K
Sbjct: 1 MSIGILGRKLGMTQIYNEAGQAVPVTVIQAGPCPVVSLKTPEKNGYSAVQLGFGEIKPHK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP++G F +V P++ L EFR+ VG + S F G+ ++V GM+ GKGF
Sbjct: 61 LTKPVKGQFDKASVEPQRYLREFRLDNV-KGYEVGQAITVSLFEEGEKINVVGMSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR NFGG ATHGVS +HR GS+G PG++FK K M GRMGG RVTVKNL VV
Sbjct: 120 AGVMKRFNFGGTFATHGVSKTHRHGGSSGASSYPGKIFKGKAMPGRMGGERVTVKNLTVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
+VD L+LVKG VPGA KN + V
Sbjct: 180 AVDTDNNLLLVKGAVPGA-KNDIVTV 204
>gi|326792607|ref|YP_004310428.1| 50S ribosomal protein L3 [Clostridium lentocellum DSM 5427]
gi|326543371|gb|ADZ85230.1| 50S ribosomal protein L3 [Clostridium lentocellum DSM 5427]
Length = 209
Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats.
Identities = 90/212 (42%), Positives = 123/212 (58%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++ +K+GMT +++ IPVTVL C V +T++ +GY A+QVG GE K K+
Sbjct: 1 MKKAILGKKIGMTQIFDENANLIPVTVLEAGPCVVTQKKTMENDGYEAIQVGFGEVKSKH 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V KP+ G F+ V KK L EFR+ +D VG+ F G VDV G + GKG+
Sbjct: 61 VIKPVAGHFAKAGVEAKKFLKEFRL-EDTSAYEVGTEIKADAFAAGDKVDVVGTSKGKGY 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+K++ HG S SHR GS G PGRV K K + MG +VTV+NLEV
Sbjct: 120 QGAIKKYGQSRGPMGHG-SKSHRVAGSMGAATSPGRVMKGKGLPSHMGCVQVTVQNLEVA 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + LIL+KG VPG K + I ++DS K+
Sbjct: 179 RVDADKNLILIKGAVPGP-KGTIITIKDSCKA 209
>gi|115378276|ref|ZP_01465444.1| ribosomal protein L3 [Stigmatella aurantiaca DW4/3-1]
gi|115364718|gb|EAU63785.1| ribosomal protein L3 [Stigmatella aurantiaca DW4/3-1]
Length = 259
Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats.
Identities = 97/221 (43%), Positives = 134/221 (60%), Gaps = 3/221 (1%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ +K+GMT V+N EG +PVTV+ + CQVV RT +K+ Y AV +G GE + K ++
Sbjct: 38 KGLIGKKIGMTQVFNDEGNLVPVTVVDVSTCQVVGKRTPEKDQYSAVTLGFGEIREKVLN 97
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+ RGFF + + ++ L EFRV +D VG FT GQLVDVTG T G+GFS
Sbjct: 98 QAQRGFFKKNSAALRRHLKEFRVTPEDAAQFNVGDAVKADLFTKGQLVDVTGTTKGRGFS 157
Query: 122 GAMKRHNFG-GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G M+R +F THG R G+ G R+ PGR + NKKM G G +VT +NL VV
Sbjct: 158 GVMRRWSFKGSQTKTHGTHEYQRHPGAIGQRKTPGRTYPNKKMPGHYGVEQVTTQNLTVV 217
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
VD ++GL+L+KG VPG ++ + VR S K A+ + K S
Sbjct: 218 DVDTEKGLLLIKGAVPG-HNDAIVYVRPSVKVALRAQHKAS 257
>gi|184200262|ref|YP_001854469.1| 50S ribosomal protein L3 [Kocuria rhizophila DC2201]
gi|212288402|sp|B2GIL4|RL3_KOCRD RecName: Full=50S ribosomal protein L3
gi|183580492|dbj|BAG28963.1| 50S ribosomal protein L3 [Kocuria rhizophila DC2201]
Length = 218
Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats.
Identities = 92/211 (43%), Positives = 124/211 (58%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT V++ G+ +PVTV+ D+ V R DK+GY AVQ+G G + V+
Sbjct: 10 KGLLGTKLGMTQVWDENGKFVPVTVVKADSNVVTQLRNTDKDGYNAVQIGFGAIDPRKVT 69
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP+ G F++ V+P++ + E R D +G S F G VDV G T GKG +G
Sbjct: 70 KPLAGHFAAAGVTPRRHVVELRTS-DAAEYELGQELSVELFEAGAKVDVVGTTKGKGTAG 128
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F G+ A+HG +HR GS G P RVFK +MAGRMG R T NL V +V
Sbjct: 129 VMKRHGFSGVGASHGAHKNHRKPGSIGGASYPARVFKGMRMAGRMGNARHTTMNLTVHAV 188
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D + L+L+KG +PG K S +LVR + K A
Sbjct: 189 DAENSLLLIKGALPGP-KGSVVLVRSTVKGA 218
>gi|329901062|ref|ZP_08272688.1| LSU ribosomal protein L3p (L3e) [Oxalobacteraceae bacterium
IMCC9480]
gi|327549262|gb|EGF33840.1| LSU ribosomal protein L3p (L3e) [Oxalobacteraceae bacterium
IMCC9480]
Length = 218
Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats.
Identities = 90/216 (41%), Positives = 126/216 (58%), Gaps = 2/216 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GM ++ +G IPVTV+ + N +V +T + +GY +VQV G+ +
Sbjct: 1 MSLGLVGRKVGMMRIFTDDGDSIPVTVVDVSNNRVTQIKTPETDGYTSVQVAFGQRRASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V++ G + V L EFR+ + G + + S F VGQ VDV G++IGKG
Sbjct: 61 VNQATAGHHAKAGVEAGTVLKEFRIDAVKASEMKAGDIVAASLFEVGQKVDVQGISIGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KR+NF RATHG S SH GS G QDPGRVF K+M G MG VT +NLE+
Sbjct: 121 YAGVIKRYNFSSGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTVTTQNLEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
+D R L+L+KG VPGA KN ++V + K
Sbjct: 181 ARIDADRQLLLIKGAVPGA-KNGKVVVSPAVKIKAK 215
>gi|311029049|ref|ZP_07707139.1| 50S ribosomal protein L3 [Bacillus sp. m3-13]
Length = 206
Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats.
Identities = 89/212 (41%), Positives = 127/212 (59%), Gaps = 7/212 (3%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY A+Q+G + + K
Sbjct: 1 MTKGILGRKVGMTQVFAENGDLIPVTVIEATPNVVLQVKTVETDGYEAIQIGFADKRDKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP++G + N +PK+ + E + VG F G +VDVTG++ GKGF
Sbjct: 61 ANKPLKGHVAKANTAPKRFIREISGANLE----VGQEVKVDIFAEGDVVDVTGISKGKGF 116
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G++KRHN THG S HR GS G P RVFK K + GRMGG R+T++NLE+V
Sbjct: 117 QGSIKRHNQSRGPMTHG-SRYHRRPGSMGPVA-PNRVFKGKLLPGRMGGERITIQNLEIV 174
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPG KK S I ++ + K+
Sbjct: 175 KVDAERNLLLVKGNVPGPKK-SLITIKSAIKA 205
>gi|75906914|ref|YP_321210.1| 50S ribosomal protein L3 [Anabaena variabilis ATCC 29413]
gi|109893410|sp|Q3MFC1|RL3_ANAVT RecName: Full=50S ribosomal protein L3
gi|75700639|gb|ABA20315.1| LSU ribosomal protein L3P [Anabaena variabilis ATCC 29413]
Length = 211
Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats.
Identities = 84/211 (39%), Positives = 125/211 (59%), Gaps = 3/211 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ KLGMT +++ G IPVTV+ + C V ++ +GY A+QVG GE K K
Sbjct: 1 MSVGILGTKLGMTQIFDEAGVAIPVTVVQVGPCVVTQVKSKQTDGYAAIQVGYGEVKPKA 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+++P+ G + + + L E+ D +G F+ G+LVDV G +IG+GF
Sbjct: 61 LNRPLLGHLAKSSAPALRHLKEYHTDSSSD-YALGQEIKADIFSAGELVDVIGTSIGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G KR+NFG +HG S +HR+ GS G PGRV+ K+MAGR+GG RVT++ L V+
Sbjct: 120 AGNQKRNNFGRGPMSHG-SKNHRAPGSIGAGTTPGRVYPGKRMAGRLGGTRVTIRKLTVI 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
VD +R L+L+KG VPG S + + + K
Sbjct: 179 RVDAERNLLLIKGAVPGKP-GSLLSIVPAKK 208
>gi|56751874|ref|YP_172575.1| 50S ribosomal protein L3 [Synechococcus elongatus PCC 6301]
gi|81301041|ref|YP_401249.1| 50S ribosomal protein L3 [Synechococcus elongatus PCC 7942]
gi|3122742|sp|O24689|RL3_SYNP6 RecName: Full=50S ribosomal protein L3
gi|109893565|sp|Q31L07|RL3_SYNE7 RecName: Full=50S ribosomal protein L3
gi|2446890|dbj|BAA22449.1| 50S ribosomal protein L3 [Synechococcus elongatus PCC 6301]
gi|56686833|dbj|BAD80055.1| 50S ribosomal protein L3 [Synechococcus elongatus PCC 6301]
gi|81169922|gb|ABB58262.1| LSU ribosomal protein L3P [Synechococcus elongatus PCC 7942]
Length = 213
Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats.
Identities = 85/209 (40%), Positives = 120/209 (57%), Gaps = 3/209 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ KLGMT +++ G+ +PVTV+ C + +T+ +GY A+Q+G E + K
Sbjct: 1 MSIGILGTKLGMTQIFDESGKAVPVTVIQAGPCPITQIKTVATDGYNAIQIGFLEVREKQ 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+SKP G S P + L E+RV D L +G + F GQ VDV G TIG+GF
Sbjct: 61 LSKPELGHLSKAGAPPLRHLLEYRV-PSTDGLELGQALTADRFEAGQKVDVQGHTIGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G KRH F +HG S +HR GSTG PGRV+ K+MAGR G ++ T++ L VV
Sbjct: 120 TGYQKRHGFARGPMSHG-SKNHRLPGSTGAGTTPGRVYPGKRMAGRSGNDKTTIRGLTVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
VD R L+LVKG VPG + + + +
Sbjct: 179 RVDADRNLLLVKGSVPGKP-GALLNITPA 206
>gi|284992874|ref|YP_003411428.1| 50S ribosomal protein L3 [Geodermatophilus obscurus DSM 43160]
gi|284066119|gb|ADB77057.1| 50S ribosomal protein L3 [Geodermatophilus obscurus DSM 43160]
Length = 221
Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats.
Identities = 93/209 (44%), Positives = 120/209 (57%), Gaps = 2/209 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ KLGMT V++ R +PVTV+ C V RT + +GY AVQ+G GE + V+K
Sbjct: 7 GLLGEKLGMTQVFDENNRIVPVTVVKAGPCVVTQVRTPEVDGYSAVQLGFGEIDPRKVNK 66
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P G F+ V+P++ L E R KD VG + F VDV G + GKG +G
Sbjct: 67 PEGGHFTKAGVTPRRHLVELR-TKDASEYTVGQELTAEVFDGVAKVDVIGTSKGKGTAGV 125
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
MKRH F GL A HG HRS GS G PGRVFK +MAGRMG + T +L V VD
Sbjct: 126 MKRHGFKGLGAAHGTQRKHRSPGSIGGASTPGRVFKGLRMAGRMGAVKTTTLSLTVHKVD 185
Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+RGL+L+KG +PG K +LVR + K
Sbjct: 186 AERGLLLIKGAIPGP-KGGLVLVRSAVKG 213
>gi|260893372|ref|YP_003239469.1| 50S ribosomal protein L3 [Ammonifex degensii KC4]
gi|260865513|gb|ACX52619.1| 50S ribosomal protein L3 [Ammonifex degensii KC4]
Length = 209
Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats.
Identities = 88/212 (41%), Positives = 124/212 (58%), Gaps = 4/212 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +KLGMT + G + VTV+ C VV + + +GY A+QVG E V
Sbjct: 1 MKGILGKKLGMTQYFTPAGEAMAVTVIKAGPCVVVQTKNRETDGYEAIQVGFEEIPEHRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+RG F+ + P + L EFRV D VG F+ G+ VDVTG++ GKGF+
Sbjct: 61 NKPLRGHFARAGLKPLRYLREFRV-PDASAYTVGQEIKVDIFSPGEKVDVTGISKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRH F +HG S HR GS G + P RVFK +K+ G MG RVTV+NLEVV
Sbjct: 120 GGIKRHGFSRGPMSHG-SKYHRRPGSLG-AKGPARVFKGRKLPGHMGMERVTVQNLEVVK 177
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD +R L++VKG VPG + ++++ + K+
Sbjct: 178 VDPERNLLVVKGAVPGP-RGGLLIIKQAVKAT 208
>gi|325191529|emb|CCA25903.1| 50S ribosomal protein L32 putative [Albugo laibachii Nc14]
Length = 280
Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats.
Identities = 102/215 (47%), Positives = 132/215 (61%), Gaps = 2/215 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+G++A K+GM V++ G TVL ++ CQV +T D +G+ A+Q+G G K +NV
Sbjct: 38 RTGLLAVKIGMISVWDYYGVAHGCTVLQVEKCQVTQVKTSDIHGFNALQLGVGLRKPRNV 97
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
KP+ G + V PK++L EFRV + D LL G+ + +F GQ VDV G + GKGF
Sbjct: 98 VKPLMGHLNKAGVPPKRQLQEFRVSE-DALLAAGTTLTAMHFVPGQYVDVCGTSKGKGFQ 156
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MK HNF G A+HG S +HR GSTG QDPGRVFK KKM GRMG RVT NL +V
Sbjct: 157 GVMKLHNFAGQPASHGNSKTHRHMGSTGQCQDPGRVFKGKKMPGRMGNKRVTRDNLWIVK 216
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
+D R L+ VKG VPG K S + V D+ K
Sbjct: 217 IDTVRNLLYVKGSVPG-TKGSIVRVTDARKKTPTA 250
>gi|323483301|ref|ZP_08088691.1| 50S ribosomal protein L3 [Clostridium symbiosum WAL-14163]
gi|323691201|ref|ZP_08105477.1| 50S ribosomal protein L3 [Clostridium symbiosum WAL-14673]
gi|323403399|gb|EGA95707.1| 50S ribosomal protein L3 [Clostridium symbiosum WAL-14163]
gi|323504720|gb|EGB20506.1| 50S ribosomal protein L3 [Clostridium symbiosum WAL-14673]
Length = 211
Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats.
Identities = 90/214 (42%), Positives = 125/214 (58%), Gaps = 3/214 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++A K+GMT ++N +G PVTVL C V +T++ +GY AVQVG + + K
Sbjct: 1 MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQVKTVENDGYKAVQVGFVDKREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP++G F V+ K+ + EFR ++ + V F G +DVT ++ GKGF
Sbjct: 61 VTKPVKGHFDKAGVAYKRFVREFR-FENAEEYSVKDEIKAEIFAAGDKIDVTAVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KR+ HG S HR GS G PGRVFK K M G MG +VT++NLEVV
Sbjct: 120 QGAIKRYGQHRGPMAHG-SKFHRHQGSNGSATTPGRVFKGKGMPGHMGSVKVTIQNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VD LILVKG VPG KK S + V+++ K+
Sbjct: 179 RVDADSNLILVKGAVPGPKK-SLVTVKETVKAGK 211
>gi|307106714|gb|EFN54959.1| hypothetical protein CHLNCDRAFT_48876 [Chlorella variabilis]
Length = 234
Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats.
Identities = 107/209 (51%), Positives = 141/209 (67%), Gaps = 2/209 (0%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
MT ++ G R+P+TVL +D+CQVV +T DK GY A+Q+G+G + K + +RG F +
Sbjct: 1 MTQEWDAWGVRVPLTVLWVDDCQVVQVKTDDKEGYTALQLGSGSKRPKQLRGTLRGHFDA 60
Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
V+PK++L EFRV D LLPVG S+F GQ VDVTG +IGKGF G MKR F G
Sbjct: 61 AGVAPKRRLAEFRVSP-DALLPVGHELRASHFVAGQFVDVTGTSIGKGFQGVMKRWGFAG 119
Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
A+HG S++HR+ GSTG QDPG+VFK KKM GRMGG RVTV+N +V VD R L+ V
Sbjct: 120 QPASHGNSLAHRAAGSTGACQDPGKVFKGKKMPGRMGGERVTVQNNQVFRVDPLRNLLYV 179
Query: 192 KGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
+G VPG K +++LVRDS K + + +
Sbjct: 180 RGHVPG-HKGNFVLVRDSAKKTLEQQPPL 207
>gi|239817873|ref|YP_002946783.1| 50S ribosomal protein L3 [Variovorax paradoxus S110]
gi|259709746|sp|C5CP53|RL3_VARPS RecName: Full=50S ribosomal protein L3
gi|239804450|gb|ACS21517.1| ribosomal protein L3 [Variovorax paradoxus S110]
Length = 226
Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats.
Identities = 84/221 (38%), Positives = 124/221 (56%), Gaps = 3/221 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GM ++ +G +PVTV+ + N +V ++ + +GY+A+QV G K V
Sbjct: 6 SLGLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQIKSQETDGYVALQVTFGSRKASRV 65
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP--SYFTVGQLVDVTGMTIGKG 119
+KP G + V + + EFRV D S F+VGQ VDV G +IGKG
Sbjct: 66 TKPQAGHLAKAGVEAGEIIREFRVTADTAGQHKAGAVIAASSVFSVGQKVDVQGTSIGKG 125
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KRHN RA+HG S SH GS G QDPGRVF K+M G +G T +NL+V
Sbjct: 126 YAGTIKRHNMSSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTKTTQNLDV 185
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
+D+ R L+L+KG +PG+ K ++ VR + K+
Sbjct: 186 FRIDEARQLLLIKGAIPGS-KGGFVTVRPAIKAKPQAAEGA 225
>gi|225621028|ref|YP_002722286.1| 50S ribosomal protein L3 [Brachyspira hyodysenteriae WA1]
gi|254803657|sp|C0QVZ6|RL3_BRAHW RecName: Full=50S ribosomal protein L3
gi|225215848|gb|ACN84582.1| 50S ribosomal protein L3 [Brachyspira hyodysenteriae WA1]
Length = 217
Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats.
Identities = 86/220 (39%), Positives = 122/220 (55%), Gaps = 3/220 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +KLGMT V++ G I VTV+ C V+ R +K+GY A+Q+G G K K++
Sbjct: 1 MVGIIGKKLGMTTVFDETGNAIAVTVVEAGPCTVMQIRDNEKDGYSAIQLGYGAVKEKHL 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
KP G F N+ PKK L EFR+ D VG F G +DV+ ++ G+GF+
Sbjct: 61 KKPQIGQFKKANLEPKKYLKEFRMD-DASSYTVGQELKADIFQAGDFIDVSSLSKGRGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRHN+ G +HG S R GS GC P RV+K K M G MG T++NL+VV
Sbjct: 120 GVMKRHNYDGGPMSHG-SNFRRRAGSIGCNSYPARVWKGKGMPGHMGNTLTTIQNLKVVE 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
+ LI++KG +PGA NS + + + K K ++
Sbjct: 179 IRPDDNLIMIKGAIPGAI-NSIVKLTSAVKKRNKKKNSMN 217
>gi|154498883|ref|ZP_02037261.1| hypothetical protein BACCAP_02875 [Bacteroides capillosus ATCC
29799]
gi|150271723|gb|EDM98949.1| hypothetical protein BACCAP_02875 [Bacteroides capillosus ATCC
29799]
Length = 240
Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats.
Identities = 84/221 (38%), Positives = 123/221 (55%), Gaps = 5/221 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M ++ +K+GMT +++ G+ IPVTV+ C V +T++K+GY AVQ+G + +
Sbjct: 1 MEKAIIGKKVGMTQIFDEAGKVIPVTVIEAGPCVVTQKKTVEKDGYTAVQLGFEDVPERK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP G VS K+ L EF + + L +G F G VDVTG++ GKG+
Sbjct: 61 LTKPELGHLKKAGVSAKRVLKEFALNNAES-LNIGDEVKADAFAAGDRVDVTGISKGKGY 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KRH L+ +HG HR GS DP R+FK K AG+MG +VTV NL+VV
Sbjct: 120 AGVIKRHGAHRLKESHGTGPVHRHAGSMSANSDPSRIFKGKIGAGQMGNEQVTVLNLDVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
VD + LI V G +PG K + +R S +N K K +
Sbjct: 180 KVDPELNLIAVCGAIPGP-KGGIVCLRSSV---INVKEKGA 216
>gi|84494786|ref|ZP_00993905.1| putative ribosomal protein L3 [Janibacter sp. HTCC2649]
gi|84384279|gb|EAQ00159.1| putative ribosomal protein L3 [Janibacter sp. HTCC2649]
Length = 218
Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats.
Identities = 92/211 (43%), Positives = 126/211 (59%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
GV+ +KLGMT V++ E R IPVTV+ C V R + +GY AVQ+ G + V+
Sbjct: 10 KGVLGKKLGMTQVWDAENRLIPVTVIEAGPCVVTQVRNAETDGYAAVQIAFGAIDPRKVT 69
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP+ G F V+P++ L E R D +G + F GQ VD++ T GKGF+G
Sbjct: 70 KPLTGHFEKAGVTPRRHLVELR-TADAAEYSLGQELTAETFEAGQAVDISATTKGKGFAG 128
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F G+ ++HG +HR GS G PGRVFK +MAGRMGG R T +NL + +V
Sbjct: 129 VMKRHGFHGVSSSHGSHKNHRKPGSIGGCATPGRVFKGMRMAGRMGGVRQTTQNLTIHAV 188
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+GL+LVKG VPG + + +LVR++ K A
Sbjct: 189 VADKGLLLVKGAVPGP-RGAVVLVRNAVKGA 218
>gi|33564555|emb|CAE43871.1| 50S ribosomal protein L3 [Bordetella pertussis Tohama I]
Length = 214
Score = 211 bits (537), Expect = 7e-53, Method: Composition-based stats.
Identities = 92/212 (43%), Positives = 124/212 (58%), Gaps = 3/212 (1%)
Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
+ RK+GMT ++ +G IPVTVL + N +V ++L+ +GY A+QV G + V KP
Sbjct: 1 MGRKVGMTRIFTEDGESIPVTVLDVSNNRVTQVKSLESDGYAAIQVTYGTRRATRVVKPQ 60
Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP--SYFTVGQLVDVTGMTIGKGFSGA 123
G ++ L EFR+ S F GQ VDVTG +IGKGF+G
Sbjct: 61 AGHYAKAGAEAGSILKEFRLDPARAAEFAAGAVIAVESVFEAGQQVDVTGTSIGKGFAGT 120
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
+KRHNFG RA+HG S SHR GS G QDPGR+F K+M+G MG TV+NL+VV VD
Sbjct: 121 IKRHNFGSQRASHGNSRSHRVPGSIGQAQDPGRIFPGKRMSGHMGDVTRTVQNLDVVRVD 180
Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
+RGL++VKG VPG ++VR + K+
Sbjct: 181 AERGLLMVKGAVPG-HAGGDVIVRPAVKAPAK 211
>gi|297571935|ref|YP_003697709.1| 50S ribosomal protein L3 [Arcanobacterium haemolyticum DSM 20595]
gi|296932282|gb|ADH93090.1| 50S ribosomal protein L3 [Arcanobacterium haemolyticum DSM 20595]
Length = 222
Score = 211 bits (537), Expect = 7e-53, Method: Composition-based stats.
Identities = 87/211 (41%), Positives = 125/211 (59%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
++ KLGMT V++ + +PVTV+ + V RT + +GY AVQ+ +GE K KNV+
Sbjct: 14 KALLGIKLGMTQVWDENAKLVPVTVVRVGKNVVTQVRTPEIDGYSAVQIASGELKAKNVT 73
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP++G F V P++ + E R D + +G F GQ +DV G + GKGF+G
Sbjct: 74 KPLKGHFEKAGVEPRRHVAEIRTV-DAEDYTLGQELGVETFEAGQTIDVIGKSKGKGFAG 132
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F G+ A+HG +HR GS G P RVF+ +MAGRMG RVTV+NL + ++
Sbjct: 133 VMKRHGFAGVSASHGAHRNHRKPGSIGACSTPSRVFRGMRMAGRMGNARVTVQNLTIHAI 192
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D + LILV G +PG K +++R + K A
Sbjct: 193 DTENNLILVSGAIPG-NKGGVVVIRTAVKGA 222
>gi|325287048|ref|YP_004262838.1| 50S ribosomal protein L3 [Cellulophaga lytica DSM 7489]
gi|324322502|gb|ADY29967.1| 50S ribosomal protein L3 [Cellulophaga lytica DSM 7489]
Length = 205
Score = 211 bits (536), Expect = 7e-53, Method: Composition-based stats.
Identities = 88/208 (42%), Positives = 122/208 (58%), Gaps = 4/208 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ RK+GMT +++ G+ IP TV+ C V RT + +GY A+Q+G + K
Sbjct: 1 MSGLIGRKIGMTSIFDENGKNIPCTVIEAGPCVVTQVRTEEVDGYNALQLGFDDKAEKRA 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+K G F SPKKK+ EF+ + + +G F G+ VDV G + GKGF
Sbjct: 61 NKAQMGHFKKAGTSPKKKVVEFQDFEGE--YKLGDTVGVDQFVEGEFVDVVGTSKGKGFQ 118
Query: 122 GAMKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH F G +ATHG R+ GS G P RVFK KMAGRMGG RVTV+NL V
Sbjct: 119 GVVKRHGFGGVGQATHGQHNRLRAPGSIGAASYPARVFKGMKMAGRMGGERVTVQNLRVY 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
V ++ L++VKGCVPG KN+++ ++
Sbjct: 179 KVVPEKNLLVVKGCVPG-HKNAYVTIQK 205
>gi|254579248|ref|XP_002495610.1| ZYRO0B15444p [Zygosaccharomyces rouxii]
gi|238938500|emb|CAR26677.1| ZYRO0B15444p [Zygosaccharomyces rouxii]
Length = 273
Score = 211 bits (536), Expect = 7e-53, Method: Composition-based stats.
Identities = 99/218 (45%), Positives = 148/218 (67%), Gaps = 2/218 (0%)
Query: 1 MRSGVVARKLGMTCVYNI-EGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
+R G + +K GM ++ G+R+ TVL +DN +V++HRT+++NGY A QVG G +
Sbjct: 56 LRCGALTKKEGMMPFFDEATGKRVACTVLKMDNVEVLMHRTMEENGYFACQVGYGSKHPQ 115
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
VS+ M G F+S V+PK+++ EFRV+ +D LLP+G++ PS+F GQ VD+ + GKG
Sbjct: 116 KVSRQMLGHFASKLVNPKERVSEFRVKNEDGLLPLGTLIKPSFFNNGQYVDLKSICKGKG 175
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G MK+++F GLRA+HG SI HR GS G QDPGRV KKM G MG + VT++N +V
Sbjct: 176 FAGVMKKYHFAGLRASHGTSIMHRHGGSYGQNQDPGRVLPGKKMPGHMGNHHVTIQNAQV 235
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
+ VDD+ G+IL+KG V G +++ ++D+ K A +
Sbjct: 236 LKVDDELGVILIKGSVAGP-TGAFVKIQDAIKKAPASE 272
>gi|56961932|ref|YP_173654.1| 50S ribosomal protein L3 [Bacillus clausii KSM-K16]
gi|81822272|sp|Q5WLR2|RL3_BACSK RecName: Full=50S ribosomal protein L3
gi|56908166|dbj|BAD62693.1| 50S ribosomal protein L3 [Bacillus clausii KSM-K16]
Length = 206
Score = 211 bits (536), Expect = 7e-53, Method: Composition-based stats.
Identities = 92/212 (43%), Positives = 132/212 (62%), Gaps = 6/212 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ G IPVTV+ + V+ +T++ +GY A+Q+G +AK
Sbjct: 1 MTKGILGRKIGMTQVFAENGEVIPVTVIEAEPNIVLQKKTVESDGYEAIQIGFADAKKP- 59
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP G + +PK+ + E R D+ + VG + + F G LVDVTG + GKGF
Sbjct: 60 -NKPATGHAAKAETAPKRFIKEIRGVNLDE-VEVGQAINVTTFAAGDLVDVTGTSKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRHN +HG S HR GS G P RVFK K + GRMGG ++T++NLE+V
Sbjct: 118 QGAIKRHNQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKALPGRMGGEQITMQNLEIV 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD++R L+LVKG VPGAKK S++ V+ + K+
Sbjct: 176 RVDEERNLLLVKGNVPGAKK-SYVTVQSAVKA 206
>gi|293375389|ref|ZP_06621670.1| 50S ribosomal protein L3 [Turicibacter sanguinis PC909]
gi|325844417|ref|ZP_08168144.1| 50S ribosomal protein L3 [Turicibacter sp. HGF1]
gi|292645942|gb|EFF63971.1| 50S ribosomal protein L3 [Turicibacter sanguinis PC909]
gi|325489091|gb|EGC91475.1| 50S ribosomal protein L3 [Turicibacter sp. HGF1]
Length = 209
Score = 211 bits (536), Expect = 7e-53, Method: Composition-based stats.
Identities = 91/213 (42%), Positives = 124/213 (58%), Gaps = 4/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT +++ EG+ IPVTV+ V+ +T + +GY AVQVG + K
Sbjct: 1 MAKGILGRKIGMTQIFSEEGKLIPVTVVQATPNVVLQVKTNETDGYEAVQVGFETKREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP G + +PK+ + EFR D VG F G++VDVTG T GKGF
Sbjct: 61 ANKPEMGHVAKAETAPKRFIREFR-NLDVAEYQVGQEIKVDTFAEGEIVDVTGKTKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G RV K KK+ G+ GGN VTV+NLE+V
Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGSIA-ANRVLKGKKLPGQTGGNIVTVQNLEIV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD +R ++L+KG VPGAKK S ++VR + K+
Sbjct: 178 KVDTERNVLLIKGNVPGAKK-SLVMVRSAVKAK 209
>gi|258512670|ref|YP_003186104.1| 50S ribosomal protein L3 [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257479396|gb|ACV59715.1| 50S ribosomal protein L3 [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 211
Score = 211 bits (536), Expect = 7e-53, Method: Composition-based stats.
Identities = 91/214 (42%), Positives = 125/214 (58%), Gaps = 4/214 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RKLGMT V+ +G +PVTV+ C V+ R LDK+GY A+Q+G + K
Sbjct: 1 MKGILGRKLGMTQVFTEDGDVVPVTVIEAGPCVVLQKRVLDKDGYEAIQLGFADKKASRA 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G + +PK+ + E R ++ VG F G +VDVTG++ GKGF+
Sbjct: 61 TKPEIGHAAKAGTAPKRYIREIRGVNVEE-YEVGQQLKADIFAPGDMVDVTGVSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRHN HG S HR GS G P R FK + MAGRMGG RVTV+NLEVV
Sbjct: 120 GPIKRHNQHRGPMAHG-SKYHRGVGSLGSIA-PNRTFKGQTMAGRMGGERVTVQNLEVVK 177
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
VD ++ +IL+KG VPG +NS++ +R + K
Sbjct: 178 VDPEKNVILIKGSVPGP-RNSFVTIRSAVKQPAK 210
>gi|325921481|ref|ZP_08183336.1| LSU ribosomal protein L3P [Xanthomonas gardneri ATCC 19865]
gi|325548028|gb|EGD19027.1| LSU ribosomal protein L3P [Xanthomonas gardneri ATCC 19865]
Length = 216
Score = 211 bits (536), Expect = 7e-53, Method: Composition-based stats.
Identities = 93/212 (43%), Positives = 128/212 (60%), Gaps = 2/212 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G V RK GM+ V+ +GR +PVT++ ++ +T++ +GY AVQ+ G + V
Sbjct: 6 SLGFVGRKAGMSRVFTEDGRSVPVTLIEATPNRIAQIKTVEADGYSAVQITVGARRAALV 65
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP G F+ V + L+EFRV+ VG F VGQ VDV G+T GKGF
Sbjct: 66 NKPAAGHFAKAKVEAGRGLWEFRVEDAQLGDFAVGGEIKADIFEVGQKVDVQGVTKGKGF 125
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR+NF ATHG S+SHR+ GS G RQ PGRVF KKM+G MG + + +NLEVV
Sbjct: 126 QGTIKRYNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVQQSTQNLEVV 185
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +RGLI ++G VPGA ++VR + K+
Sbjct: 186 KVDVERGLIAIRGAVPGAA-GGDVIVRPASKA 216
>gi|293115547|ref|ZP_05792032.2| 50S ribosomal protein L3 [Butyrivibrio crossotus DSM 2876]
gi|292809408|gb|EFF68613.1| 50S ribosomal protein L3 [Butyrivibrio crossotus DSM 2876]
Length = 240
Score = 211 bits (536), Expect = 8e-53, Method: Composition-based stats.
Identities = 90/230 (39%), Positives = 120/230 (52%), Gaps = 19/230 (8%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++A K+GMT ++N +G +PVTVL C V +T++ +GY AVQVG + K K
Sbjct: 14 MKKAILATKIGMTQIFNEDGVLVPVTVLQAGPCVVTQVKTVENDGYAAVQVGFVDKKEKI 73
Query: 61 VSKPMR----------------GFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
V+ G F VS K+ + EFR + D V F
Sbjct: 74 VNVDKNGSKEIRNRHGVTKAEKGHFDKAGVSYKRYVREFRFENAAD-YTVADEIKADIFA 132
Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
G +D T + GKGF GA+KRH HG S HR GS G DP RVFK K M
Sbjct: 133 AGDKLDATAIAKGKGFQGAIKRHGQHRGPMAHG-SKFHRHQGSNGSSSDPSRVFKGKGMP 191
Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
G MG ++TV+NLE+V VD + LILVKG VPG KK S + ++++ KS
Sbjct: 192 GHMGAKKITVQNLEIVKVDVENNLILVKGAVPGPKK-SLVTLKETVKSGK 240
>gi|319948723|ref|ZP_08022844.1| 50S ribosomal protein L3 [Dietzia cinnamea P4]
gi|319437625|gb|EFV92624.1| 50S ribosomal protein L3 [Dietzia cinnamea P4]
Length = 221
Score = 211 bits (536), Expect = 8e-53, Method: Composition-based stats.
Identities = 88/216 (40%), Positives = 120/216 (55%), Gaps = 3/216 (1%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT V++ R +PVTV+ C V RT + +GY AVQ+ G + V+
Sbjct: 7 KGILGAKLGMTQVFDENNRVVPVTVVKAGPCVVTGIRTEENDGYNAVQIAFGAVDPRKVT 66
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
KP+ G F V+P++ + E R+ + +G F G VDVTG + GKGF
Sbjct: 67 KPVAGQFEKAGVTPRRHIAEIRLDNAEQAAGYEIGQEIGADVFEDGAFVDVTGTSKGKGF 126
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKRH F G A+HG HR GS G PGRVFK K MAGRMG RVT NL+V
Sbjct: 127 AGTMKRHGFAGQGASHGTQAVHRKPGSIGGASTPGRVFKGKAMAGRMGNERVTTMNLKVH 186
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
VD + G++L+KG +PG + ++VR + K
Sbjct: 187 KVDAEAGVLLIKGAIPG-RNGGLVMVRSAVKGGARA 221
>gi|289665137|ref|ZP_06486718.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. vasculorum
NCPPB702]
gi|289669344|ref|ZP_06490419.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. musacearum
NCPPB4381]
Length = 216
Score = 211 bits (536), Expect = 9e-53, Method: Composition-based stats.
Identities = 92/212 (43%), Positives = 127/212 (59%), Gaps = 2/212 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G V RK GM+ + +GR +PVT++ ++ +T++ +GY AVQ+ G + V
Sbjct: 6 SLGFVGRKAGMSRFFTEDGRSVPVTLIEATPNRIAQIKTVEVDGYSAVQITVGARRAALV 65
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP G F+ V + L+EFRV+ VG F VGQ VDV G+T GKGF
Sbjct: 66 NKPAAGHFAKAKVEAGRGLWEFRVEDAQLGDFAVGGEIKADIFEVGQKVDVQGVTKGKGF 125
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR+NF ATHG S+SHR+ GS G RQ PGRVF KKM+G MG + + +NLEVV
Sbjct: 126 QGTIKRYNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVQQSTQNLEVV 185
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +RGLI ++G VPGA ++VR + K+
Sbjct: 186 KVDVERGLIAIRGAVPGAA-GGDVIVRPASKA 216
>gi|21230364|ref|NP_636281.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66769642|ref|YP_244404.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. campestris
str. 8004]
gi|166710831|ref|ZP_02242038.1| 50S ribosomal protein L3 [Xanthomonas oryzae pv. oryzicola BLS256]
gi|188992854|ref|YP_001904864.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. campestris
str. B100]
gi|42559653|sp|Q8PC49|RL3_XANCP RecName: Full=50S ribosomal protein L3
gi|81304403|sp|Q4URD9|RL3_XANC8 RecName: Full=50S ribosomal protein L3
gi|226730589|sp|B0RU82|RL3_XANCB RecName: Full=50S ribosomal protein L3
gi|21111920|gb|AAM40205.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66574974|gb|AAY50384.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. campestris
str. 8004]
gi|167734614|emb|CAP52824.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. campestris]
Length = 216
Score = 211 bits (536), Expect = 9e-53, Method: Composition-based stats.
Identities = 93/212 (43%), Positives = 128/212 (60%), Gaps = 2/212 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G V RK GM+ V+ +GR +PVT++ ++ +T++ +GY AVQ+ G + V
Sbjct: 6 SLGFVGRKAGMSRVFTEDGRSVPVTLIEATPNRIAQIKTVEVDGYSAVQITVGARRAALV 65
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP G F+ V + L+EFRV+ VG F VGQ VDV G+T GKGF
Sbjct: 66 NKPAAGHFAKAKVEAGRGLWEFRVEDAQLGDFAVGGEIKADIFEVGQKVDVQGVTKGKGF 125
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR+NF ATHG S+SHR+ GS G RQ PGRVF KKM+G MG + + +NLEVV
Sbjct: 126 QGTIKRYNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVQQSTQNLEVV 185
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +RGLI ++G VPGA ++VR + K+
Sbjct: 186 KVDVERGLIAIRGAVPGAA-GGDVIVRPASKA 216
>gi|118486756|gb|ABK95213.1| unknown [Populus trichocarpa]
Length = 315
Score = 211 bits (536), Expect = 9e-53, Method: Composition-based stats.
Identities = 108/212 (50%), Positives = 143/212 (67%), Gaps = 2/212 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+GVVA K GMT +++ G RIP+TVL +D+ V +T++K G+ A+QVG G+ K K++
Sbjct: 69 RTGVVAVKCGMTALWDKWGARIPITVLWVDDNIVSQVKTVEKEGFFALQVGCGQKKEKHL 128
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F + V K+KL EF V + D LLPVG+ +F GQ VDV G+T+GKGF
Sbjct: 129 TKPEVGHFRAQGVPMKRKLREFPVTE-DALLPVGTYVGVRHFVPGQFVDVAGITMGKGFQ 187
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRH F G A+HG S+SHRS GSTG R PG+VFK KKM GRMGG + TVKN+ V
Sbjct: 188 GGMKRHGFKGGPASHGASLSHRSIGSTGQRDAPGKVFKGKKMPGRMGGVQRTVKNVWVYK 247
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+D R L+ VKG VPGA+ N ++ ++DS
Sbjct: 248 IDPARNLMWVKGQVPGAEGN-FVFIKDSVYKK 278
>gi|72163045|ref|YP_290702.1| 50S ribosomal protein L3 [Thermobifida fusca YX]
gi|109893568|sp|Q47LJ3|RL3_THEFY RecName: Full=50S ribosomal protein L3
gi|71916777|gb|AAZ56679.1| LSU ribosomal protein L3P [Thermobifida fusca YX]
Length = 216
Score = 210 bits (535), Expect = 9e-53, Method: Composition-based stats.
Identities = 96/212 (45%), Positives = 125/212 (58%), Gaps = 2/212 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
GV+ KLGMT V++ G+ +PVTVL V RT + +GY A+Q+G G + V+
Sbjct: 7 KGVLGEKLGMTQVFDESGKVVPVTVLKAGPAVVTRVRTPETDGYSAIQLGYGHINPRKVN 66
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP+ + N++P++ E R D VG + F G+ VDVTG T GKG++G
Sbjct: 67 KPLGDYLRKHNLTPRRHYVEVRTS-DASEYTVGQEITADVFQPGEKVDVTGKTKGKGYAG 125
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH FGGL A+HG HRS GS G PGRVFK +MAGRMG R TV+NL V SV
Sbjct: 126 VMKRHGFGGLGASHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNVRRTVQNLTVHSV 185
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
D ++GL+LVKG VPG +LVR + K
Sbjct: 186 DAEKGLLLVKGAVPGP-NGGLVLVRTAVKGGK 216
>gi|163847923|ref|YP_001635967.1| 50S ribosomal protein L3 [Chloroflexus aurantiacus J-10-fl]
gi|222525803|ref|YP_002570274.1| 50S ribosomal protein L3 [Chloroflexus sp. Y-400-fl]
gi|189042836|sp|A9WH66|RL3_CHLAA RecName: Full=50S ribosomal protein L3
gi|254803663|sp|B9LJD2|RL3_CHLSY RecName: Full=50S ribosomal protein L3
gi|163669212|gb|ABY35578.1| ribosomal protein L3 [Chloroflexus aurantiacus J-10-fl]
gi|222449682|gb|ACM53948.1| ribosomal protein L3 [Chloroflexus sp. Y-400-fl]
Length = 210
Score = 210 bits (535), Expect = 9e-53, Method: Composition-based stats.
Identities = 89/212 (41%), Positives = 126/212 (59%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GM + +G IPVTV+ C V RT +++GY AVQ+G E + +
Sbjct: 1 MIHGLLGRKIGMMQYFTAQGMAIPVTVIAAGPCIVTQIRTPERDGYSAVQLGYEEVEPRK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP +G + + L EF D G V + F GQ VD++G + G+GF
Sbjct: 61 LTKPQQGHLKASGGKMLRYLREFSAD-DPQAHTPGEVVTVELFRPGQKVDISGTSKGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KRH F G THG S HR+ GS G PGRV+K ++MAGRMGG RVT++NLEVV
Sbjct: 120 AGVVKRHGFRGGPKTHGQSDRHRAPGSIGAGTTPGRVWKGQRMAGRMGGTRVTIQNLEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V ++ L+LVKG VPGA +N + +R + K
Sbjct: 180 EVLPEQNLLLVKGSVPGA-RNGLLQIRKAVKG 210
>gi|227876215|ref|ZP_03994331.1| ribosomal protein L3 [Mobiluncus mulieris ATCC 35243]
gi|307701180|ref|ZP_07638202.1| 50S ribosomal protein L3 [Mobiluncus mulieris FB024-16]
gi|227843176|gb|EEJ53369.1| ribosomal protein L3 [Mobiluncus mulieris ATCC 35243]
gi|307613574|gb|EFN92821.1| 50S ribosomal protein L3 [Mobiluncus mulieris FB024-16]
Length = 218
Score = 210 bits (535), Expect = 9e-53, Method: Composition-based stats.
Identities = 88/210 (41%), Positives = 129/210 (61%), Gaps = 2/210 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
++ RKLGMT V++ EG+ +PVTV+ ++ V RT +++GY A+Q+G G+ + V+
Sbjct: 10 KALLGRKLGMTQVWDEEGKLVPVTVVEVEKNVVTDIRTPERDGYTALQLGFGQLDERKVT 69
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KPM G F+ V+P++ L E R D +G F G LVDVTG T GKGF+G
Sbjct: 70 KPMAGHFAKSGVTPRRHLAEVRTT-DAGSYELGQELGADLFETGALVDVTGNTKGKGFAG 128
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F G+ ++HG +HR GS G PGRVF+ MAGRMGG R T+ NL+V ++
Sbjct: 129 VMKRHGFQGVSSSHGAHRNHRKPGSIGACATPGRVFRGLNMAGRMGGERRTIMNLKVQAI 188
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
D +GL+++ G +PG K +++R + K
Sbjct: 189 DADKGLVVIAGAIPGP-KGGIVMIRSAVKG 217
>gi|156848338|ref|XP_001647051.1| hypothetical protein Kpol_1050p50 [Vanderwaltozyma polyspora DSM
70294]
gi|156117734|gb|EDO19193.1| hypothetical protein Kpol_1050p50 [Vanderwaltozyma polyspora DSM
70294]
Length = 271
Score = 210 bits (535), Expect = 9e-53, Method: Composition-based stats.
Identities = 103/216 (47%), Positives = 143/216 (66%), Gaps = 2/216 (0%)
Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
+R GV+A+K GM ++ G R TVL L+N +V++HRTL NGY A QVG G+
Sbjct: 54 LRCGVIAQKKGMMPYFDENTGERTAATVLQLNNVEVLMHRTLKDNGYYACQVGFGDKDPS 113
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+VS+ M G F+S V+PK+ + EFRV+ + LLP+G++ PS+F GQ VD+ + GKG
Sbjct: 114 HVSRQMLGHFASKIVNPKETVAEFRVKNESGLLPLGTLLKPSFFKPGQFVDLKSTSKGKG 173
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G MKR +F GLRA+HG S+ HR GS G QDPGR+ KKM GRMGG VT++N+++
Sbjct: 174 FQGVMKRFHFAGLRASHGTSVMHRHGGSFGQNQDPGRILPGKKMPGRMGGKNVTIQNVQI 233
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
+ VDD+ +I+VKG V G K S+I ++DS K
Sbjct: 234 LKVDDENNVIIVKGSVAGP-KGSYIKLQDSIKKPPK 268
>gi|145588242|ref|YP_001154839.1| ribosomal protein L3 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|189042856|sp|A4SUW1|RL3_POLSQ RecName: Full=50S ribosomal protein L3
gi|145046648|gb|ABP33275.1| LSU ribosomal protein L3P [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 218
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 85/219 (38%), Positives = 130/219 (59%), Gaps = 3/219 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT ++ EG IPVTV+ + + ++ +T +GY A+Q+ G +
Sbjct: 1 MSLGLIGRKVGMTRLFTDEGDSIPVTVIDVSDNRIAQIKTQATDGYDAIQLAHGTRRATR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQ--KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
V+K M G F+ V L EF++ K ++ P + + + FT GQ VDV G++IGK
Sbjct: 61 VTKAMAGHFAKAGVMAGNGLNEFQLDAAKIAEMTPGQVIPADTAFTAGQKVDVQGVSIGK 120
Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
G++G +KR++F RA+HG S SH GS G QDPGRVF K+M G +G TV+NL
Sbjct: 121 GYAGTIKRYHFASGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTRTVQNLV 180
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
+ +D +R LI+VKG +PGA ++V + K+ + K
Sbjct: 181 IARIDAERNLIMVKGAIPGAP-GGKVIVTPAVKTPLKKK 218
>gi|269796255|ref|YP_003315710.1| 50S ribosomal protein L3P [Sanguibacter keddieii DSM 10542]
gi|269098440|gb|ACZ22876.1| LSU ribosomal protein L3P [Sanguibacter keddieii DSM 10542]
Length = 219
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 92/211 (43%), Positives = 127/211 (60%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
+ V+ KLGMT V++ GR +PVTV+ + V RT + +GY AVQ+ G+ + VS
Sbjct: 11 TAVLGTKLGMTQVWDEAGRLVPVTVVQVGTNVVTQVRTAELDGYAAVQLAYGQIDPRKVS 70
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
+P++G F V+P++ + E R D +G + F G +VDV G T GKGF+G
Sbjct: 71 QPLKGHFEKAGVTPRRHVTEIRTS-DAGEFTLGQELTAEAFASGSVVDVIGTTKGKGFAG 129
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F G+ A+HG +HR GS G P RVFK +MAGRMG +R T +NL V +V
Sbjct: 130 VMKRHGFHGVGASHGAHKNHRKPGSIGGASTPSRVFKGVRMAGRMGVDRQTTQNLTVHAV 189
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D ++GL+LVKG VPG K +LVR + K A
Sbjct: 190 DAEKGLLLVKGAVPGP-KGGVVLVRSAAKGA 219
>gi|89100349|ref|ZP_01173214.1| 50S ribosomal protein L3 [Bacillus sp. NRRL B-14911]
gi|89084970|gb|EAR64106.1| 50S ribosomal protein L3 [Bacillus sp. NRRL B-14911]
Length = 208
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 85/212 (40%), Positives = 127/212 (59%), Gaps = 4/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ G IPVTV+ V+ +++D +GY A+Q+G + + K
Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVVEATGNVVLQVKSVDTDGYEAIQLGFEDKREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + + +PK+ + EFR VG F G VDVTG++ GKGF
Sbjct: 61 SNKPEQGHVAKADTAPKRFVREFRGVDLAA-YEVGQEVKVDIFAEGDTVDVTGISKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G++KRH +HG S HR GS G P RVFK K + GRMGG+++TV+NLE+V
Sbjct: 120 QGSIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKALPGRMGGDQITVQNLEIV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+D +R L+L+KG VPGAKK + + ++ + K+
Sbjct: 178 KIDAERNLLLIKGNVPGAKK-ALLKIKTAVKA 208
>gi|56418641|ref|YP_145959.1| 50S ribosomal protein L3 [Geobacillus kaustophilus HTA426]
gi|261417607|ref|YP_003251289.1| 50S ribosomal protein L3 [Geobacillus sp. Y412MC61]
gi|297528482|ref|YP_003669757.1| 50S ribosomal protein L3 [Geobacillus sp. C56-T3]
gi|319765265|ref|YP_004130766.1| 50S ribosomal protein L3 [Geobacillus sp. Y412MC52]
gi|81819840|sp|Q5L3Z7|RL3_GEOKA RecName: Full=50S ribosomal protein L3
gi|56378483|dbj|BAD74391.1| 50S ribosomal protein L3 [Geobacillus kaustophilus HTA426]
gi|261374064|gb|ACX76807.1| 50S ribosomal protein L3 [Geobacillus sp. Y412MC61]
gi|297251734|gb|ADI25180.1| 50S ribosomal protein L3 [Geobacillus sp. C56-T3]
gi|317110131|gb|ADU92623.1| 50S ribosomal protein L3 [Geobacillus sp. Y412MC52]
Length = 213
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 86/204 (42%), Positives = 121/204 (59%), Gaps = 3/204 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT ++ G IPVTV+H V+ +T++ +GY A+Q+G + K
Sbjct: 1 MTKGILGRKIGMTQIFAENGDLIPVTVIHATPNVVLQKKTIENDGYEAIQLGFEDISEKR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP G + N +PK+ + E R D+ VG F+ G++VDVTG++ GKGF
Sbjct: 61 ANKPQIGHAAKANTAPKRFIREIRGANIDE-YEVGQEVKVDIFSEGEIVDVTGISKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH HG S HR GS G P RVFK K + GRMGG RVT++NL++V
Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGSIA-PNRVFKTKNLPGRMGGERVTIQNLKIV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWI 204
VD +R L+L+KG VPG +K I
Sbjct: 178 KVDPERNLLLIKGNVPGPRKGLVI 201
>gi|225020386|ref|ZP_03709578.1| hypothetical protein CORMATOL_00393 [Corynebacterium matruchotii
ATCC 33806]
gi|305680123|ref|ZP_07402933.1| 50S ribosomal protein L3 [Corynebacterium matruchotii ATCC 14266]
gi|224946775|gb|EEG27984.1| hypothetical protein CORMATOL_00393 [Corynebacterium matruchotii
ATCC 33806]
gi|305660743|gb|EFM50240.1| 50S ribosomal protein L3 [Corynebacterium matruchotii ATCC 14266]
Length = 218
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 83/214 (38%), Positives = 121/214 (56%), Gaps = 2/214 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ +KLGMT +++ +PVTV+ C + RT + +GY A+Q+ G+ + V
Sbjct: 7 KGLLGKKLGMTQIFDENNHVVPVTVVEAGPCVITQIRTQETDGYTAIQIAYGDIDPRKVK 66
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP G F+ V+P++ + E R+ D +G + + F VDVTG+T GKGF+G
Sbjct: 67 KPQAGHFNKAGVTPRRHVAEIRMD-DVSGYELGQEITANIFDGITFVDVTGITKGKGFAG 125
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F G A HG SHR G G PGRVFK K+MAGRMG +RVT +NL++ +
Sbjct: 126 GMKRHGFAGQGAGHGNQASHRRVGGIGACATPGRVFKGKRMAGRMGQDRVTTQNLKIQKI 185
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
D LIL+KG +PG + + V+ + K
Sbjct: 186 DADANLILIKGAIPG-NRGGIVTVKTAVKGGNRA 218
>gi|158337810|ref|YP_001518986.1| 50S ribosomal protein L3 [Acaryochloris marina MBIC11017]
gi|189042827|sp|B0C1D3|RL3_ACAM1 RecName: Full=50S ribosomal protein L3
gi|158308051|gb|ABW29668.1| 50S ribosomal protein L3 [Acaryochloris marina MBIC11017]
Length = 212
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 82/209 (39%), Positives = 123/209 (58%), Gaps = 3/209 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ KLGMT V++ GR IPVTV+ C V +T +GY A+Q+G G K
Sbjct: 1 MSVGILGTKLGMTQVFDEAGRAIPVTVVQAGPCPVTQIKTAQTDGYTAIQIGYGSTTEKA 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+++P G +P + L E+R+ D +G S F+ GQLVD++G +IG+GF
Sbjct: 61 LTRPELGHLKKSGSTPVRHLQEYRL-ADVSEYELGQSISADLFSEGQLVDISGTSIGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G KRHNF HG S +HR+ GSTG PGR++ K+MAG+MG + T++ L VV
Sbjct: 120 AGYQKRHNFRRGPMGHG-SKNHRAPGSTGAGTTPGRIYPGKRMAGQMGNVKKTIRKLTVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
VD +R ++L+KG VPG + + ++ +
Sbjct: 179 RVDAERNVLLIKGSVPGKP-GALLNIQPA 206
>gi|323706450|ref|ZP_08118011.1| 50S ribosomal protein L3 [Thermoanaerobacterium xylanolyticum
LX-11]
gi|323534170|gb|EGB23960.1| 50S ribosomal protein L3 [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 209
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 94/213 (44%), Positives = 128/213 (60%), Gaps = 4/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++ +K GMT ++ IPVTV+ C VV +T + +GY A+QVG G+ K K
Sbjct: 1 MKKAILGKKHGMTQIFVGN-EMIPVTVVEAGPCVVVQKKTKENDGYDAIQVGFGDVKEKR 59
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+ KP++G F+ NV KK L EFR+ D VGS F+VG VDV G + GKGF
Sbjct: 60 LIKPLKGHFAKANVPFKKYLREFRLD-DISSYEVGSEIKADIFSVGDRVDVIGTSKGKGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR+N HG S HR GS G DP R FK K++ G MG RVT++NLEVV
Sbjct: 119 AGVVKRYNANRGPMAHG-SKYHRRPGSMGASSDPSRTFKGKRLPGHMGNERVTIQNLEVV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD ++ L+L+KG VPG K S +++RD+ KS
Sbjct: 178 KVDPEKNLLLIKGSVPG-VKGSLLMIRDTVKSK 209
>gi|225571552|ref|ZP_03780548.1| hypothetical protein CLOHYLEM_07650 [Clostridium hylemonae DSM
15053]
gi|225159629|gb|EEG72248.1| hypothetical protein CLOHYLEM_07650 [Clostridium hylemonae DSM
15053]
Length = 226
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 88/228 (38%), Positives = 125/228 (54%), Gaps = 19/228 (8%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++A K+GMT ++N +G PVTVL C V +T + +GY AVQVG + K K
Sbjct: 1 MKKAILATKVGMTQIFNEDGTLTPVTVLQAGPCVVTQVKTAENDGYDAVQVGFVDKKEKT 60
Query: 61 VSKP----------------MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
V+K +G F+ VS K+ + EF+ ++ + F
Sbjct: 61 VNKDKSGKKEIVHRHGVTKAEQGHFAKAGVSGKRFVREFK-FENASEYELAQEIKADIFE 119
Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
G +D T ++ GKGF GA+KRHN THG S HR GS G DP +VFK KKM
Sbjct: 120 AGDKIDATAVSKGKGFQGAIKRHNQHRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKMP 178
Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
G MG ++T++NLEVV VD + L+LVKG VPG KK S + ++++ K+
Sbjct: 179 GHMGSKKITIQNLEVVRVDAENNLLLVKGSVPGPKK-SLVTIKEAVKA 225
>gi|21241737|ref|NP_641319.1| 50S ribosomal protein L3 [Xanthomonas axonopodis pv. citri str.
306]
gi|78046555|ref|YP_362730.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|294627843|ref|ZP_06706422.1| 50S ribosomal protein L3 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|294663996|ref|ZP_06729410.1| 50S ribosomal protein L3 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|325925387|ref|ZP_08186789.1| LSU ribosomal protein L3P [Xanthomonas perforans 91-118]
gi|42559654|sp|Q8PNS4|RL3_XANAC RecName: Full=50S ribosomal protein L3
gi|109893571|sp|Q3BWY3|RL3_XANC5 RecName: Full=50S ribosomal protein L3
gi|21107108|gb|AAM35855.1| 50S ribosomal protein L3 [Xanthomonas axonopodis pv. citri str.
306]
gi|78034985|emb|CAJ22630.1| 50S ribosomal protein L3 [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|292597757|gb|EFF41915.1| 50S ribosomal protein L3 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292606225|gb|EFF49462.1| 50S ribosomal protein L3 [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|325544265|gb|EGD15646.1| LSU ribosomal protein L3P [Xanthomonas perforans 91-118]
Length = 216
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 94/212 (44%), Positives = 128/212 (60%), Gaps = 2/212 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G V RK GM+ V+ +GR +PVT++ ++ +T++ +GY AVQV G + V
Sbjct: 6 SLGFVGRKAGMSRVFTEDGRSVPVTLIEATPNRIAQIKTVEVDGYSAVQVTVGARRAALV 65
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP G F+ V + L+EFRV+ VG F VGQ VDV G+T GKGF
Sbjct: 66 NKPAAGHFAKAKVEAGRGLWEFRVEDAQLGDFAVGGEIKADIFEVGQKVDVQGVTKGKGF 125
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR+NF ATHG S+SHR+ GS G RQ PGRVF KKM+G MG + + +NLEVV
Sbjct: 126 QGTIKRYNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVQQSTQNLEVV 185
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +RGLI ++G VPGA ++VR + K+
Sbjct: 186 KVDVERGLIAIRGAVPGAA-GGDVIVRPASKA 216
>gi|227487123|ref|ZP_03917439.1| 50S ribosomal protein L3 [Corynebacterium glucuronolyticum ATCC
51867]
gi|227541710|ref|ZP_03971759.1| 50S ribosomal protein L3 [Corynebacterium glucuronolyticum ATCC
51866]
gi|227092781|gb|EEI28093.1| 50S ribosomal protein L3 [Corynebacterium glucuronolyticum ATCC
51867]
gi|227182525|gb|EEI63497.1| 50S ribosomal protein L3 [Corynebacterium glucuronolyticum ATCC
51866]
Length = 216
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 84/210 (40%), Positives = 119/210 (56%), Gaps = 2/210 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT V++ + R +PVTV+ C V RT++ +GY A+Q+ GE +
Sbjct: 7 KGILGTKLGMTQVFDEDNRVVPVTVVEAGPCVVTQIRTVETDGYNAIQIAYGEIDPRKAK 66
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP G +P++ + E R+ D +G + F LVDVTG T GKG++G
Sbjct: 67 KPQVGHAKKAGATPRRHVAEIRMD-DVSGYELGQDVTVDIFEGVNLVDVTGTTKGKGYAG 125
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
AMKRH F G A HG +HR G G PGRVFK +MAGRMG +RVT +NL+V +
Sbjct: 126 AMKRHGFAGQGAAHGNQAAHRRVGGIGACATPGRVFKGTRMAGRMGQDRVTTQNLKVQRI 185
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
D + LIL+KG +PG + + V+ + K
Sbjct: 186 DAEANLILIKGAIPG-NRGGLVTVKTAVKG 214
>gi|300857246|ref|YP_003782230.1| 50S ribosomal protein L3 [Clostridium ljungdahlii DSM 13528]
gi|300437361|gb|ADK17128.1| 50S ribosomal protein L3 [Clostridium ljungdahlii DSM 13528]
Length = 209
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 89/212 (41%), Positives = 126/212 (59%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++ RKLGMT ++N G+ IPVTV+ C V+ +T++K+GY AVQVG + + K
Sbjct: 1 MKKAILGRKLGMTQIFNENGKVIPVTVIEAGPCAVIQKKTVEKDGYEAVQVGFSDIREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KPM+G F V+ K+ + EF+++ G FT G VDV+G++ GKGF
Sbjct: 61 VNKPMKGHFEKAGVTLKRFIKEFKLEN-ASEYKEGQEIKADVFTAGDKVDVSGVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR N +HG S HR+ GS G DP R FKN KMAG MG TV NLEV
Sbjct: 120 QGTIKRWNAQRGPMSHG-SKFHRAPGSMGACSDPSRTFKNMKMAGHMGNRNTTVLNLEVA 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V ++ +IL+KG VPG K + +R++ K+
Sbjct: 179 KVIPEKNIILIKGGVPGPNKG-LVAIRNTVKA 209
>gi|229542203|ref|ZP_04431263.1| ribosomal protein L3 [Bacillus coagulans 36D1]
gi|229326623|gb|EEN92298.1| ribosomal protein L3 [Bacillus coagulans 36D1]
Length = 209
Score = 210 bits (535), Expect = 1e-52, Method: Composition-based stats.
Identities = 88/213 (41%), Positives = 123/213 (57%), Gaps = 4/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY A+Q+G + +
Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEATPNVVLQKKTVETDGYEAIQLGFADKPERL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G S N +PK+ + EF D VG F G +VDVTG+T GKGF
Sbjct: 61 ANKPEKGHVSKANAAPKRFIREFSGVNTSD-FEVGQEVKVDIFAEGDIVDVTGVTKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFK K + GRMGG RVTV+NL++V
Sbjct: 120 QGVIKRHGQHRGPMAHG-SRYHRRPGSMGPIA-PNRVFKQKALPGRMGGERVTVQNLQIV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD +R L+L+KG VPG +K + + V+ + K+
Sbjct: 178 KVDAERNLLLIKGNVPGPRK-ALVTVKAAVKAK 209
>gi|226942778|ref|YP_002797851.1| 50S ribosomal protein L3 [Azotobacter vinelandii DJ]
gi|226717705|gb|ACO76876.1| 50S ribosomal protein L3 [Azotobacter vinelandii DJ]
Length = 200
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 89/201 (44%), Positives = 128/201 (63%), Gaps = 3/201 (1%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
MT ++ EG +PVTV+ ++ +V + + +GY+AVQV GE + V+K G F+
Sbjct: 1 MTRIFTEEGVSVPVTVIEIEPNRVTQFKNAESDGYLAVQVTVGERRASRVTKAQAGHFAK 60
Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
NV+ + ++EFR+++ + G + F GQLVDVTG + GKG++G +KR NF G
Sbjct: 61 ANVAAGRGVWEFRLEEGE--YQSGDQITVEIFQAGQLVDVTGQSKGKGYAGTIKRWNFRG 118
Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
THG S+SHR GS G Q PGRVFK KKM+G +G RVTV++LEVV VD +R L+LV
Sbjct: 119 QDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHLGAERVTVQSLEVVRVDSERNLLLV 178
Query: 192 KGCVPGAKKNSWILVRDSFKS 212
KG +PGA ++VR + K+
Sbjct: 179 KGAIPGA-TGGDVIVRPAAKA 198
>gi|319796217|ref|YP_004157857.1| 50S ribosomal protein l3 [Variovorax paradoxus EPS]
gi|315598680|gb|ADU39746.1| 50S ribosomal protein L3 [Variovorax paradoxus EPS]
Length = 226
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 84/221 (38%), Positives = 124/221 (56%), Gaps = 3/221 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GM ++ +G +PVTV+ + N +V ++ + +GY+A+QV G K V
Sbjct: 6 SLGLLGRKVGMMRLFTDDGDAVPVTVVDVSNNRVTQIKSQETDGYVALQVTFGSRKASRV 65
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP--SYFTVGQLVDVTGMTIGKG 119
+KP G + V + + EFRV + S F+VGQ VDV G +IGKG
Sbjct: 66 TKPEAGHLAKAGVEAGEIIQEFRVTAETAGQHKAGGVIAAGSVFSVGQKVDVQGTSIGKG 125
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G +KRHN RA+HG S SH GS G QDPGRVF K+M G +G T +NL+V
Sbjct: 126 FAGTIKRHNMSSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTKTTQNLDV 185
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
+D+ R L+L+KG +PG+ K ++ VR + K+
Sbjct: 186 FRIDEARQLLLIKGAIPGS-KGGFVTVRPAIKAKPQAAEGA 225
>gi|169335629|ref|ZP_02862822.1| hypothetical protein ANASTE_02049 [Anaerofustis stercorihominis DSM
17244]
gi|169258367|gb|EDS72333.1| hypothetical protein ANASTE_02049 [Anaerofustis stercorihominis DSM
17244]
Length = 216
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 91/214 (42%), Positives = 127/214 (59%), Gaps = 3/214 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++A+K+GMT V++ G IPVTVL C V+ +T++K+GY AVQ+G GE KN
Sbjct: 6 MKKAIMAKKVGMTQVFSETGEVIPVTVLQAGPCYVLQVKTVEKDGYEAVQLGYGEINEKN 65
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP++G F V P +K+ EFR D G+ F G +D+TG++ GKGF
Sbjct: 66 VNKPLKGHFEKAGVKPVRKIKEFRFD-DCSGYETGNEIKADVFEAGDKIDITGVSKGKGF 124
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH HG S SHR G+ PGRV K K M G MG +VTV+NL VV
Sbjct: 125 QGAIKRHGQSRGPMGHG-SKSHRVVGAMSGASYPGRVMKGKNMPGHMGSEKVTVQNLTVV 183
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
D++ ++LVKG VPG+ S + + DS K++
Sbjct: 184 KADNENNMLLVKGAVPGS-NGSIVTITDSIKASK 216
>gi|88854682|ref|ZP_01129348.1| 50S ribosomal protein L3 [marine actinobacterium PHSC20C1]
gi|88815843|gb|EAR25699.1| 50S ribosomal protein L3 [marine actinobacterium PHSC20C1]
Length = 216
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 92/212 (43%), Positives = 130/212 (61%), Gaps = 2/212 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +KLGMT V++ + +PVTV+ + V RT + +GY AVQ+ G+ + V
Sbjct: 7 TKGLLGKKLGMTQVWDENNKLVPVTVVEITPNVVTQLRTPEVDGYSAVQIAYGQIDPRKV 66
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+ G F V+P++ + E R D VG + FT G VDV G + GKGF+
Sbjct: 67 NKPLTGHFDKAGVTPRRHITEIRTS-DAADYTVGQELAVDIFTPGSKVDVVGTSKGKGFA 125
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRHNF G+ A+HG +HR GS G P RVFK +MAGRMGG+RVTV NL V +
Sbjct: 126 GVMKRHNFKGVSASHGSHRNHRKPGSIGASSTPSRVFKGMRMAGRMGGDRVTVMNLAVHA 185
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+D ++GL+L+KG VPGA + + VR++ K A
Sbjct: 186 IDLEKGLVLIKGAVPGA-RGRIVFVRNAVKGA 216
>gi|154494380|ref|ZP_02033700.1| hypothetical protein PARMER_03735 [Parabacteroides merdae ATCC
43184]
gi|218262297|ref|ZP_03476811.1| hypothetical protein PRABACTJOHN_02485 [Parabacteroides johnsonii
DSM 18315]
gi|154085824|gb|EDN84869.1| hypothetical protein PARMER_03735 [Parabacteroides merdae ATCC
43184]
gi|218223448|gb|EEC96098.1| hypothetical protein PRABACTJOHN_02485 [Parabacteroides johnsonii
DSM 18315]
Length = 205
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 86/204 (42%), Positives = 124/204 (60%), Gaps = 4/204 (1%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT V++ EG+ +P TV+ + C V +TL+K+GY AVQ+G E K K+ ++
Sbjct: 3 GLLGKKIGMTSVFSAEGKNLPCTVIEVGPCVVTQIKTLEKDGYEAVQLGFEEKKEKHTTQ 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P G F V+PK+ L EF+ + + +G V + Y VDV G + GKGF G
Sbjct: 63 PEMGHFKKAGVTPKRYLAEFKNFETE--YKLGDVITVDYLEDAGFVDVVGTSKGKGFQGV 120
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G + THG R+ G G P +VFK +MAG+MG RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRLRAPGGIGACSYPAKVFKGMRMAGQMGNERVTVQNLQVIKV 180
Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
+ L+LVKG VPGA K S +L+
Sbjct: 181 MPEHNLLLVKGSVPGA-KGSILLI 203
>gi|30018380|ref|NP_830011.1| 50S ribosomal protein L3 [Bacillus cereus ATCC 14579]
gi|42559608|sp|Q81J42|RL3_BACCR RecName: Full=50S ribosomal protein L3
gi|29893920|gb|AAP07212.1| LSU ribosomal protein L3P [Bacillus cereus ATCC 14579]
Length = 210
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 93/211 (44%), Positives = 132/211 (62%), Gaps = 4/211 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ G IPVTV+ + V+ +T + +GY A+Q+G + + K
Sbjct: 1 MTKGILGRKIGMTQVFAENGELIPVTVIAANPNVVLQKKTTETDGYNAIQLGFEDKREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + + +PK+ + E R D D L VG F G++VDVTG++ GKGF
Sbjct: 61 TNKPEQGHTAKASTTPKRFIREIR-DADVDGLEVGQEVKVDVFATGEIVDVTGISKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH +HG S HR GS G P RVFK KK+AGRMGG++VT++NLE+V
Sbjct: 120 QGVIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKKLAGRMGGDQVTIQNLEIV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
VD +R L+LVKG VPGAKK S ++V+ + K
Sbjct: 178 QVDTERNLLLVKGNVPGAKK-SLVVVQGAVK 207
>gi|190572944|ref|YP_001970789.1| 50S ribosomal protein L3 [Stenotrophomonas maltophilia K279a]
gi|194364534|ref|YP_002027144.1| 50S ribosomal protein L3 [Stenotrophomonas maltophilia R551-3]
gi|254522293|ref|ZP_05134348.1| ribosomal protein L3 [Stenotrophomonas sp. SKA14]
gi|226730572|sp|B4SKW3|RL3_STRM5 RecName: Full=50S ribosomal protein L3
gi|226730573|sp|B2FQ45|RL3_STRMK RecName: Full=50S ribosomal protein L3
gi|190010866|emb|CAQ44475.1| putative 50S ribosomal protein L3 [Stenotrophomonas maltophilia
K279a]
gi|194347338|gb|ACF50461.1| ribosomal protein L3 [Stenotrophomonas maltophilia R551-3]
gi|219719884|gb|EED38409.1| ribosomal protein L3 [Stenotrophomonas sp. SKA14]
Length = 216
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 97/212 (45%), Positives = 129/212 (60%), Gaps = 2/212 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G V RK GM+ V+ +GR IPVT++ ++ +T++ +GY AVQV G + V
Sbjct: 6 SLGFVGRKAGMSRVFTEDGRSIPVTLIEATPNRIAQIKTVETDGYSAVQVTVGARRAALV 65
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP G F+ V + L+EFRV+ VG F VGQ+VDV G+T GKGF
Sbjct: 66 NKPEAGHFAKAKVEAGRGLWEFRVEDAQLGDFAVGGEVKADIFEVGQIVDVQGVTKGKGF 125
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRHNF ATHG S+SHR+ GS G RQ PGRVF KKM+G MG + + +NLEVV
Sbjct: 126 QGTIKRHNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVQQSTQNLEVV 185
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +RGLI V+G VPGA ++VR + K+
Sbjct: 186 KVDVERGLIAVRGAVPGAA-GGDVIVRPASKA 216
>gi|229825321|ref|ZP_04451390.1| hypothetical protein GCWU000182_00675 [Abiotrophia defectiva ATCC
49176]
gi|229790693|gb|EEP26807.1| hypothetical protein GCWU000182_00675 [Abiotrophia defectiva ATCC
49176]
Length = 211
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 91/211 (43%), Positives = 126/211 (59%), Gaps = 3/211 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++A K+GMT ++ +G IPVTVL D V +T++ +GY AVQVG G+ +
Sbjct: 1 MKKAILATKIGMTQIFAEDGSLIPVTVLKADPAVVTQVKTVENDGYSAVQVGFGDIRENL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP +G F+ V K+ L EF++ +D + G F G VD T + GKGF
Sbjct: 61 VNKPKKGHFAKAGVPVKRFLREFKL-EDAENYKAGDEIKSDVFAAGDKVDATATSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+ RH HG S HR GS G DP +VFK KKMAG MG +VTV+NLEVV
Sbjct: 120 QGAIHRHGLHRGPMAHG-SKYHRHAGSNGACSDPSKVFKGKKMAGHMGHVKVTVQNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
VD ++ LILVKG VPGAKK + ++++ + +
Sbjct: 179 RVDAEKNLILVKGAVPGAKK-ALVMLKSTTR 208
>gi|163938118|ref|YP_001643002.1| 50S ribosomal protein L3 [Bacillus weihenstephanensis KBAB4]
gi|218895245|ref|YP_002443656.1| ribosomal protein L3 [Bacillus cereus G9842]
gi|228970299|ref|ZP_04130958.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|229053956|ref|ZP_04195390.1| 50S ribosomal protein L3 [Bacillus cereus AH603]
gi|229131118|ref|ZP_04260030.1| 50S ribosomal protein L3 [Bacillus cereus BDRD-ST196]
gi|226725130|sp|B7IT19|RL3_BACC2 RecName: Full=50S ribosomal protein L3
gi|226725133|sp|A9VP77|RL3_BACWK RecName: Full=50S ribosomal protein L3
gi|163860315|gb|ABY41374.1| ribosomal protein L3 [Bacillus weihenstephanensis KBAB4]
gi|218544022|gb|ACK96416.1| ribosomal protein L3 [Bacillus cereus G9842]
gi|228652331|gb|EEL08256.1| 50S ribosomal protein L3 [Bacillus cereus BDRD-ST196]
gi|228721374|gb|EEL72895.1| 50S ribosomal protein L3 [Bacillus cereus AH603]
gi|228789408|gb|EEM37328.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|326937905|gb|AEA13801.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar chinensis
CT-43]
Length = 210
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 93/214 (43%), Positives = 133/214 (62%), Gaps = 4/214 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ G IPVTV+ + V+ +T + +GY A+Q+G + + K
Sbjct: 1 MTKGILGRKIGMTQVFAENGELIPVTVIAANPNVVLQKKTTETDGYNAIQLGFEDKREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + + +PK+ + E R D D L VG F G++VDVTG++ GKGF
Sbjct: 61 TNKPEQGHTAKASTTPKRFIREIR-DADVDGLEVGQEVKVEVFAAGEIVDVTGISKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH +HG S HR GS G P RVFK KK+AGRMGG++VT++NLE+V
Sbjct: 120 QGVIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKKLAGRMGGDQVTIQNLEIV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VD +R L+LVKG VPGAKK S ++V+ + K +
Sbjct: 178 QVDTERNLLLVKGNVPGAKK-SLVVVQGAVKVSK 210
>gi|326334545|ref|ZP_08200756.1| 50S ribosomal protein L3 [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325693314|gb|EGD35242.1| 50S ribosomal protein L3 [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 205
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 83/208 (39%), Positives = 127/208 (61%), Gaps = 4/208 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT +++ G+ IP T++ C V RT + +GY A+Q+G + K K+
Sbjct: 1 MSGLIGKKVGMTSIFDENGKNIPCTIIEAGPCVVTQVRTKEVDGYEALQLGFDDKKEKHT 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+K G F+ +SPKKKL EF+ + +G + +F G+ VDVTG + GKGF
Sbjct: 61 NKAAAGHFAKAGISPKKKLIEFQGF--ESTYKLGDTITAEFFVEGEFVDVTGTSKGKGFQ 118
Query: 122 GAMKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G ++RH F G ++THG R+ GS G P RVFK +MAGRMG +VTV+NL V+
Sbjct: 119 GVVRRHGFGGVGQSTHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGAEKVTVQNLRVL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
V ++ L+++KGCVPG KN+++ +
Sbjct: 179 KVIPEKNLLILKGCVPG-HKNAYVTIHK 205
>gi|311744809|ref|ZP_07718605.1| 50S ribosomal protein L3 [Aeromicrobium marinum DSM 15272]
gi|311311926|gb|EFQ81847.1| 50S ribosomal protein L3 [Aeromicrobium marinum DSM 15272]
Length = 222
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 93/212 (43%), Positives = 130/212 (61%), Gaps = 2/212 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ RKLGMT V++ + R +PVTV+ D V RT + +GY AVQ+G GE + V+K
Sbjct: 11 GLLGRKLGMTQVWDADNRVVPVTVIAADTNVVTQIRTRETDGYSAVQLGFGEIDGRKVNK 70
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P G F V+P++ + E R + D +G SP F G +VDVTG + GKGF+G
Sbjct: 71 PQSGHFDKAGVTPRRHVVEIRTEAIAD-YTLGQEISPEIFAAGDVVDVTGTSKGKGFAGV 129
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
MKRH F G+ A+HG +HR GS G PGRVFK +MAG MG ++VT +NL V +VD
Sbjct: 130 MKRHGFHGVGASHGAHRNHRKPGSIGGCATPGRVFKGLRMAGHMGTDQVTTQNLTVHAVD 189
Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
++G+IL+KG VPG K +++R + K
Sbjct: 190 LEKGVILIKGAVPGP-KGQLVVIRSAAKRIAK 220
>gi|108797986|ref|YP_638183.1| 50S ribosomal protein L3 [Mycobacterium sp. MCS]
gi|119867082|ref|YP_937034.1| 50S ribosomal protein L3 [Mycobacterium sp. KMS]
gi|126433648|ref|YP_001069339.1| 50S ribosomal protein L3 [Mycobacterium sp. JLS]
gi|123070590|sp|Q1BDA7|RL3_MYCSS RecName: Full=50S ribosomal protein L3
gi|166233164|sp|A3PVC1|RL3_MYCSJ RecName: Full=50S ribosomal protein L3
gi|166233165|sp|A1UBN6|RL3_MYCSK RecName: Full=50S ribosomal protein L3
gi|108768405|gb|ABG07127.1| LSU ribosomal protein L3P [Mycobacterium sp. MCS]
gi|119693171|gb|ABL90244.1| LSU ribosomal protein L3P [Mycobacterium sp. KMS]
gi|126233448|gb|ABN96848.1| LSU ribosomal protein L3P [Mycobacterium sp. JLS]
Length = 217
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 88/213 (41%), Positives = 125/213 (58%), Gaps = 3/213 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ KLGMT V++ + +PVTV+ V RT +++GY AVQ+ GE + V
Sbjct: 3 RKGILGTKLGMTQVFDENNKVVPVTVVKAGPNVVTRIRTPERDGYSAVQIAYGEISPRKV 62
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKD--DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+KP+ G F++ V+P++ L E R+ + VG + F+ G VDVTG + GKG
Sbjct: 63 NKPVTGQFAAAGVNPRRHLAELRLDDESAAADYEVGQELTAEVFSDGAYVDVTGTSKGKG 122
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G MKRH F G A HG HR GS G PGRVFK +M+GRMG +RVT +NL V
Sbjct: 123 FAGTMKRHGFKGQGAAHGAQAVHRRPGSIGGCATPGRVFKGTRMSGRMGSDRVTTQNLVV 182
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD G++L+KG +PG + ++VR + K
Sbjct: 183 HKVDAANGVLLIKGAIPG-RNGGLVMVRSAIKR 214
>gi|83949796|ref|ZP_00958529.1| Ribosomal protein L3 [Roseovarius nubinhibens ISM]
gi|83837695|gb|EAP76991.1| Ribosomal protein L3 [Roseovarius nubinhibens ISM]
Length = 268
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 122/204 (59%), Positives = 148/204 (72%), Gaps = 2/204 (0%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
MT ++ +G++IPVTVL LD QVV RT + +GY AVQ+GAG K K VSK MRG FS
Sbjct: 1 MTRLFMEDGKQIPVTVLQLDKLQVVAQRTPEAHGYSAVQLGAGSIKAKRVSKAMRGHFSI 60
Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
V PK+K+ EFRV ++L+ VG + ++ GQ VDV+G +IGKGF+GAMKRHNFGG
Sbjct: 61 AKVEPKRKIAEFRVAP-ENLINVGEEITADHYFEGQFVDVSGTSIGKGFAGAMKRHNFGG 119
Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
LRATHGVSISHRSHGSTG QDPGRVFK KKMAG MG RVT +NL+VV D RGLI+V
Sbjct: 120 LRATHGVSISHRSHGSTGQCQDPGRVFKGKKMAGHMGAARVTTQNLQVVKTDADRGLIMV 179
Query: 192 KGCVPGAKKNSWILVRDSFKSAVN 215
KG VPG+ K W+ V+D+ K
Sbjct: 180 KGAVPGS-KGGWVTVKDAVKKPFP 202
>gi|300782608|ref|YP_003762899.1| 50S ribosomal protein L3 [Amycolatopsis mediterranei U32]
gi|299792122|gb|ADJ42497.1| large subunit ribosomal protein L3 [Amycolatopsis mediterranei U32]
Length = 218
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 92/211 (43%), Positives = 120/211 (56%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ KLGMT V++ + R +PVTV+ V RT DK+GY AVQ+ G + V
Sbjct: 6 MKGILGTKLGMTQVFDEQNRVVPVTVVKAGPNVVTQVRTQDKDGYTAVQLAFGAVDPRKV 65
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F V+P++ L E R D + VG + F G VDVTG + GKG++
Sbjct: 66 NKPRTGHFDKAGVTPRRFLAELRTT-DAETYEVGQEITAEVFAAGVEVDVTGTSKGKGYA 124
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRH F G A+HG HR GS G PGRVFK +MAGRMG +RVT +NL V +
Sbjct: 125 GVMKRHGFKGQGASHGAQAVHRKPGSIGGCATPGRVFKGLRMAGRMGNDRVTTQNLTVHA 184
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V GL+L+KG VPG K + VR + K
Sbjct: 185 VRADDGLLLIKGAVPGP-KGGVLFVRSAAKG 214
>gi|150392160|ref|YP_001322209.1| ribosomal protein L3 [Alkaliphilus metalliredigens QYMF]
gi|189042829|sp|A6TWI2|RL3_ALKMQ RecName: Full=50S ribosomal protein L3
gi|149952022|gb|ABR50550.1| ribosomal protein L3 [Alkaliphilus metalliredigens QYMF]
Length = 210
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 86/210 (40%), Positives = 121/210 (57%), Gaps = 3/210 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT ++N +G PVTV+ + V ++ + +GY +VQVG GE K+KN
Sbjct: 1 MKGLMGRKVGMTQIFNEDGIVTPVTVIEVAENVVTQIKSDETDGYNSVQVGYGEKKIKNT 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
KP++G F +PK+ + EFRV + G F G VDVTG++ GKGF
Sbjct: 61 IKPLQGHFEKAGTTPKRTMKEFRVDSTEG-FTAGQELKADLFQAGDKVDVTGISKGKGFQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRH HG S HR GS G PGRVFK K + G MG +VT +NLE+V
Sbjct: 120 GVIKRHGQSRGPMAHG-SRYHRRPGSMGASAYPGRVFKGKNLPGHMGNVQVTAQNLEIVR 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
VD ++ L+L+KG VPG KK + ++ + K
Sbjct: 179 VDLEKNLLLIKGAVPGPKKGVLV-IQTTVK 207
>gi|257866529|ref|ZP_05646182.1| 50S ribosomal protein L3 [Enterococcus casseliflavus EC30]
gi|257870517|ref|ZP_05650170.1| 50S ribosomal protein L3 [Enterococcus gallinarum EG2]
gi|257872956|ref|ZP_05652609.1| 50S ribosomal protein L3 [Enterococcus casseliflavus EC10]
gi|257876133|ref|ZP_05655786.1| 50S ribosomal protein L3 [Enterococcus casseliflavus EC20]
gi|325567376|ref|ZP_08144043.1| 50S ribosomal protein L3 [Enterococcus casseliflavus ATCC 12755]
gi|257800487|gb|EEV29515.1| 50S ribosomal protein L3 [Enterococcus casseliflavus EC30]
gi|257804681|gb|EEV33503.1| 50S ribosomal protein L3 [Enterococcus gallinarum EG2]
gi|257807120|gb|EEV35942.1| 50S ribosomal protein L3 [Enterococcus casseliflavus EC10]
gi|257810299|gb|EEV39119.1| 50S ribosomal protein L3 [Enterococcus casseliflavus EC20]
gi|325158809|gb|EGC70955.1| 50S ribosomal protein L3 [Enterococcus casseliflavus ATCC 12755]
Length = 209
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 90/213 (42%), Positives = 131/213 (61%), Gaps = 4/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY A+QVG + +
Sbjct: 1 MTKGILGKKVGMTQIFTESGELIPVTVVEATPNVVLQVKTIENDGYEAIQVGYQDMREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EF+ + + L VGS F G ++DVTG + GKGF
Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFKNVELEG-LEVGSEIKVDIFEAGDIIDVTGTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFKNK++AGRMGGNR+T++NLE+V
Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRITIQNLEIV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD +R +IL+KG VPGAKK S I ++ + K+
Sbjct: 178 RVDAERNVILIKGNVPGAKK-SLITIKSAVKAK 209
>gi|194689948|gb|ACF79058.1| unknown [Zea mays]
Length = 254
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 104/212 (49%), Positives = 146/212 (68%), Gaps = 2/212 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+GV+ K GM+ +++ G ++P+TVL +D+ V +T +K G+ A+Q+GAG+ K K++
Sbjct: 7 RTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVTQVKTAEKEGFFALQLGAGQKKEKHL 66
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F + V K+KL EF V + D LLPVG+ + +F GQ VDVTG+T GKGF+
Sbjct: 67 TKPEVGHFRAQGVPLKRKLREFPVTE-DALLPVGTSITVRHFVPGQFVDVTGITKGKGFA 125
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR+ FGG+ A+HG S++HRS GSTG R PGRVFKN+KM GRMGG + TVKN+ V
Sbjct: 126 GVMKRYGFGGMPASHGTSLAHRSGGSTGQRDAPGRVFKNRKMPGRMGGVQRTVKNVWVYQ 185
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+D R L+ +KG VPG + S+I V+DS
Sbjct: 186 IDPARNLLYLKGQVPGPQ-GSFIFVKDSIYKK 216
>gi|167759862|ref|ZP_02431989.1| hypothetical protein CLOSCI_02225 [Clostridium scindens ATCC 35704]
gi|167662481|gb|EDS06611.1| hypothetical protein CLOSCI_02225 [Clostridium scindens ATCC 35704]
Length = 226
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 86/228 (37%), Positives = 125/228 (54%), Gaps = 19/228 (8%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++A K+GMT +++ +G PVTVL C V +T++ +GY AVQVG + K K
Sbjct: 1 MKKAILATKVGMTQIFSEDGTLTPVTVLQAGPCVVTQVKTVENDGYDAVQVGFVDKKDKI 60
Query: 61 VSKP----------------MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
V+K +G F+ VS K+ + EF+++ + F
Sbjct: 61 VNKDKSGKKEIAHRHGVTKAEQGHFAKAGVSGKRFVREFKLEN-AGEYELAQEIKADIFE 119
Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
G +D T ++ GKGF GA+KRH THG S HR GS G DP +VFK KKM
Sbjct: 120 AGDKIDATAISKGKGFQGAIKRHGQHRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKMP 178
Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
G MG ++T++NLE+V VD + LILVKG VPG KK S + ++++ K+
Sbjct: 179 GHMGSKKITIQNLEIVRVDAENNLILVKGSVPGPKK-SLVTIKEAVKA 225
>gi|51894210|ref|YP_076901.1| 50S ribosomal protein L3 [Symbiobacterium thermophilum IAM 14863]
gi|81826004|sp|Q67JU3|RL3_SYMTH RecName: Full=50S ribosomal protein L3
gi|51857899|dbj|BAD42057.1| 50S ribosomal protein L3 [Symbiobacterium thermophilum IAM 14863]
Length = 216
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 98/210 (46%), Positives = 132/210 (62%), Gaps = 4/210 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ G++ +KLGMT ++ +G+ IPVTV+ C VV +T +GY AVQ+G GE +
Sbjct: 1 MQKGILGKKLGMTQIFAPDGKIIPVTVVEAGPCVVVQKKTTATDGYNAVQLGFGEIRETL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP++G F V + L EFR+ D + L VG V F G+LVDVTG++ GKGF
Sbjct: 61 VNKPLKGHFEKHQVKATRYLREFRLD-DVESLNVGDVIKADIFAEGELVDVTGISRGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR NF ++HG S HR GS G R+ RV K +K+ GR+GG RVTV L VV
Sbjct: 120 AGGVKRWNFNRGPSSHG-SKYHRRPGSLGQRRWA-RVPKGRKLPGRLGGERVTVLGLRVV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
VD ++ LIL+KG VPGA K S I +RDS
Sbjct: 178 KVDPEKNLILIKGAVPGA-KGSLITIRDSV 206
>gi|323141356|ref|ZP_08076247.1| 50S ribosomal protein L3 [Phascolarctobacterium sp. YIT 12067]
gi|322414105|gb|EFY04933.1| 50S ribosomal protein L3 [Phascolarctobacterium sp. YIT 12067]
Length = 213
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 93/216 (43%), Positives = 131/216 (60%), Gaps = 5/216 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGMT ++ +GR IPVTV+ C V+ ++T + +GY AVQ+G GE K K+
Sbjct: 1 MAKGILGKKLGMTQIFEADGRLIPVTVVEAGPCVVLQNKTEETDGYNAVQLGFGEIKEKH 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KPM+G F V+P K + E R+ VG + F G+L+D +G++ GKGF
Sbjct: 61 TTKPMKGHFDKAGVTPVKFVRELRLAAP-SEYAVGDKIAADIFAAGELIDASGVSRGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTG--CRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
+G +KRHNF HG S SHR GS G GRV K KK+ GRMG VTV+ L
Sbjct: 120 AGTIKRHNFSRGPMKHG-SKSHREPGSMGPMHSGPGGRVIKGKKLPGRMGNANVTVQRLT 178
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VV VD +R LILVKG +PGA S+++++++ K
Sbjct: 179 VVKVDAERNLILVKGAIPGA-TGSYVVLKETVKPNK 213
>gi|171462879|ref|YP_001796992.1| ribosomal protein L3 [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|226730546|sp|B1XSQ1|RL3_POLNS RecName: Full=50S ribosomal protein L3
gi|171192417|gb|ACB43378.1| ribosomal protein L3 [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 218
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 88/219 (40%), Positives = 129/219 (58%), Gaps = 3/219 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT ++ EG IPVTV+ + + +V +T NGY A+Q+ G +
Sbjct: 1 MSLGLIGRKVGMTRLFTDEGEAIPVTVIDVSDNRVAQIKTQATNGYDAIQLAHGTRRATR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQ--KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
V+K M G F+ V L EF + K ++ P + + + FT GQ VDV G+TIGK
Sbjct: 61 VTKAMAGHFAKAGVMAGNALNEFHLDAAKIAEMTPGQVIPAETAFTAGQKVDVQGVTIGK 120
Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
G++G +KR++F RA+HG S SH GS G QDPGRVF K+M G +G TV+NL
Sbjct: 121 GYAGTIKRYHFASGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDITRTVQNLV 180
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
+ +D +R LI+VKG +PGA ++V + K+ + K
Sbjct: 181 IARIDAERNLIMVKGAIPGAP-GGKVIVTPAVKTPLKKK 218
>gi|30248418|ref|NP_840488.1| ribosomal protein L3 [Nitrosomonas europaea ATCC 19718]
gi|42559613|sp|Q82X88|RL3_NITEU RecName: Full=50S ribosomal protein L3
gi|30138304|emb|CAD84312.1| Ribosomal protein L3 [Nitrosomonas europaea ATCC 19718]
Length = 215
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 96/216 (44%), Positives = 130/216 (60%), Gaps = 2/216 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ G++ +K+GMT V+ G IPVTVL + +VV +T +K+GY AVQ+ G +
Sbjct: 1 MKLGLIGKKIGMTRVFTESGNSIPVTVLDVSGNRVVQVKTEEKDGYSAVQLTQGYRRKNR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
++K + G FS V + EFRV D + +GS S F VG VDV G++IGKG
Sbjct: 61 ITKALSGHFSQAGVEAGTVIKEFRVDHDIGSDIKIGSEISVELFEVGSKVDVCGISIGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KRHNF RA+HG S SH GS G QDPGRVF KKM G +G + TV+N+EV
Sbjct: 121 YAGTIKRHNFSSSRASHGNSRSHNVPGSIGMAQDPGRVFPGKKMTGHLGNAQCTVQNIEV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
V VD RGL+ +KG VPG+K N + +R K
Sbjct: 181 VRVDAGRGLLFLKGSVPGSKGNG-VFIRPGVKQPSK 215
>gi|184155991|ref|YP_001844331.1| 50S ribosomal protein L3 [Lactobacillus fermentum IFO 3956]
gi|227515487|ref|ZP_03945536.1| ribosomal protein L3 [Lactobacillus fermentum ATCC 14931]
gi|260662752|ref|ZP_05863646.1| 50S ribosomal protein L3 [Lactobacillus fermentum 28-3-CHN]
gi|212288403|sp|B2GDW9|RL3_LACF3 RecName: Full=50S ribosomal protein L3
gi|183227335|dbj|BAG27851.1| 50S ribosomal protein L3 [Lactobacillus fermentum IFO 3956]
gi|227086100|gb|EEI21412.1| ribosomal protein L3 [Lactobacillus fermentum ATCC 14931]
gi|260552833|gb|EEX25832.1| 50S ribosomal protein L3 [Lactobacillus fermentum 28-3-CHN]
Length = 220
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 78/215 (36%), Positives = 120/215 (55%), Gaps = 4/215 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT V+ G +PVTV+ + V+ +TL+ +GY AVQ+G + +
Sbjct: 1 MTKGILGKKVGMTQVFTDNGELVPVTVIDVTPNVVMQVKTLENDGYSAVQLGFDDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + E R + D + VG + F G+ VDVTG T G G+
Sbjct: 61 SNKPEQGHAAKANTTPKRFIGEIRDAELGDDIKVGDKVAADIFAEGETVDVTGTTKGHGY 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G + + HG S HR GS G VFK KK+ GRMG N TV++L +V
Sbjct: 121 QGNIHKDGQRRGPMAHG-SRYHRRPGSLGAI--INHVFKGKKLPGRMGNNTRTVQHLRIV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
VD + ++L+KG VPGA K S++ +++S K+
Sbjct: 178 KVDTENNVLLIKGNVPGANK-SFVTIKNSVKANTK 211
>gi|22297625|ref|NP_680872.1| 50S ribosomal protein L3 [Thermosynechococcus elongatus BP-1]
gi|42559634|sp|Q8DMN1|RL3_THEEB RecName: Full=50S ribosomal protein L3
gi|22293802|dbj|BAC07634.1| 50S ribosomal protein L3 [Thermosynechococcus elongatus BP-1]
Length = 212
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 87/210 (41%), Positives = 125/210 (59%), Gaps = 3/210 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ KLGMT +++ GR +P+TV+ C + +T +GY A+QV GE + KN
Sbjct: 1 MTVGILGTKLGMTQIFDEAGRSVPITVVQAGPCPITQIKTPQTDGYTAIQVAYGEVREKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+S+P RG + P + L EFR+ +D +G + F+ GQLVDV G +IG+GF
Sbjct: 61 LSRPERGHLNKSQTPPMRHLREFRL-EDVSAYQLGQAITVDIFSPGQLVDVRGTSIGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G KRHNF HG S +HR GSTG PGRVF K+MAGRMG VT++ L+V+
Sbjct: 120 AGYQKRHNFKRGPMAHG-SKNHRLPGSTGAGTTPGRVFPGKRMAGRMGNTAVTIRKLQVM 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
VD +R LIL+KG +PG + + + +
Sbjct: 179 RVDPERNLILIKGALPGKP-GALVSITPAK 207
>gi|258568440|ref|XP_002584964.1| 60S ribosomal protein L9 [Uncinocarpus reesii 1704]
gi|237906410|gb|EEP80811.1| 60S ribosomal protein L9 [Uncinocarpus reesii 1704]
Length = 301
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 97/215 (45%), Positives = 140/215 (65%), Gaps = 3/215 (1%)
Query: 2 RSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
R+G +A K GM+ +++ G+R P T+L LD QV+ H+T +K+GY AVQVG G N
Sbjct: 73 RTGAIAIKKGMSAIFDPETGKRTPCTILQLDRVQVISHKTREKHGYFAVQVGFGWKNPSN 132
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V++PM G F++ VSPK+ + EFRV+ + LLP+G + + +F GQ VDV + G GF
Sbjct: 133 VTRPMLGHFAANEVSPKRYVHEFRVRDEVGLLPIGQMINADWFQEGQFVDVRSHSRGMGF 192
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ-DPGRVFKNKKMAGRMGGNRVTVKNLEV 179
+G MKR FGG +HGVS++HRS GSTG Q RV+ KKM G MG +VT +NL+V
Sbjct: 193 TGVMKRWGFGGQDRSHGVSLTHRSLGSTGPSQGGGSRVYPGKKMPGNMGNEQVTTQNLKV 252
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
+ VD ++GL++VKG V G K + ++D+ K +
Sbjct: 253 LKVDPEKGLVVVKGSVSGP-KGRCVKIQDAIKKPL 286
>gi|30260301|ref|NP_842678.1| 50S ribosomal protein L3 [Bacillus anthracis str. Ames]
gi|42779191|ref|NP_976438.1| 50S ribosomal protein L3 [Bacillus cereus ATCC 10987]
gi|47525366|ref|YP_016715.1| 50S ribosomal protein L3 [Bacillus anthracis str. 'Ames Ancestor']
gi|49183144|ref|YP_026396.1| 50S ribosomal protein L3 [Bacillus anthracis str. Sterne]
gi|49479271|ref|YP_034462.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|52145108|ref|YP_081721.1| 50S ribosomal protein L3 [Bacillus cereus E33L]
gi|118475879|ref|YP_893030.1| 50S ribosomal protein L3 [Bacillus thuringiensis str. Al Hakam]
gi|206972204|ref|ZP_03233151.1| 50S ribosomal protein L3 [Bacillus cereus AH1134]
gi|217957685|ref|YP_002336229.1| 50S ribosomal protein L3 [Bacillus cereus AH187]
gi|218230754|ref|YP_002364959.1| 50S ribosomal protein L3 [Bacillus cereus B4264]
gi|218901314|ref|YP_002449148.1| ribosomal protein L3 [Bacillus cereus AH820]
gi|222093880|ref|YP_002527930.1| 50S ribosomal protein l3 [Bacillus cereus Q1]
gi|225862162|ref|YP_002747540.1| 50S ribosomal protein L3 [Bacillus cereus 03BB102]
gi|227812783|ref|YP_002812792.1| 50S ribosomal protein L3 [Bacillus anthracis str. CDC 684]
gi|228912849|ref|ZP_04076496.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|228919060|ref|ZP_04082439.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228983365|ref|ZP_04143578.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229089241|ref|ZP_04220522.1| 50S ribosomal protein L3 [Bacillus cereus Rock3-42]
gi|229153888|ref|ZP_04282018.1| 50S ribosomal protein L3 [Bacillus cereus ATCC 4342]
gi|229182504|ref|ZP_04309755.1| 50S ribosomal protein L3 [Bacillus cereus BGSC 6E1]
gi|229188395|ref|ZP_04315443.1| 50S ribosomal protein L3 [Bacillus cereus ATCC 10876]
gi|229194500|ref|ZP_04321303.1| 50S ribosomal protein L3 [Bacillus cereus m1293]
gi|229603960|ref|YP_002864761.1| 50S ribosomal protein L3 [Bacillus anthracis str. A0248]
gi|254684386|ref|ZP_05148246.1| 50S ribosomal protein L3 [Bacillus anthracis str. CNEVA-9066]
gi|254720832|ref|ZP_05182624.1| 50S ribosomal protein L3 [Bacillus anthracis str. A1055]
gi|254733589|ref|ZP_05191309.1| 50S ribosomal protein L3 [Bacillus anthracis str. Western North
America USA6153]
gi|254739507|ref|ZP_05197204.1| 50S ribosomal protein L3 [Bacillus anthracis str. Kruger B]
gi|254751228|ref|ZP_05203266.1| 50S ribosomal protein L3 [Bacillus anthracis str. Vollum]
gi|254756765|ref|ZP_05208794.1| 50S ribosomal protein L3 [Bacillus anthracis str. Australia 94]
gi|296500944|ref|YP_003662644.1| 50S ribosomal protein L3 [Bacillus thuringiensis BMB171]
gi|300119578|ref|ZP_07057122.1| 50S ribosomal protein L3 [Bacillus cereus SJ1]
gi|301051847|ref|YP_003790058.1| 50S ribosomal protein L3 [Bacillus anthracis CI]
gi|42559609|sp|Q81VT0|RL3_BACAN RecName: Full=50S ribosomal protein L3
gi|81824428|sp|Q63H90|RL3_BACCZ RecName: Full=50S ribosomal protein L3
gi|81828437|sp|Q6HPQ8|RL3_BACHK RecName: Full=50S ribosomal protein L3
gi|81831213|sp|Q73F96|RL3_BACC1 RecName: Full=50S ribosomal protein L3
gi|166233117|sp|A0R8I0|RL3_BACAH RecName: Full=50S ribosomal protein L3
gi|226725129|sp|B7JKB9|RL3_BACC0 RecName: Full=50S ribosomal protein L3
gi|226725131|sp|B7HJ48|RL3_BACC4 RecName: Full=50S ribosomal protein L3
gi|226725132|sp|B7HQU4|RL3_BACC7 RecName: Full=50S ribosomal protein L3
gi|254803651|sp|C3P9Q5|RL3_BACAA RecName: Full=50S ribosomal protein L3
gi|254803652|sp|C3LJ82|RL3_BACAC RecName: Full=50S ribosomal protein L3
gi|254803653|sp|C1ET39|RL3_BACC3 RecName: Full=50S ribosomal protein L3
gi|254803654|sp|B9IZJ4|RL3_BACCQ RecName: Full=50S ribosomal protein L3
gi|30253622|gb|AAP24164.1| 50S ribosomal protein L3 [Bacillus anthracis str. Ames]
gi|42735106|gb|AAS39046.1| ribosomal protein L3 [Bacillus cereus ATCC 10987]
gi|47500514|gb|AAT29190.1| ribosomal protein L3 [Bacillus anthracis str. 'Ames Ancestor']
gi|49177071|gb|AAT52447.1| ribosomal protein L3 [Bacillus anthracis str. Sterne]
gi|49330827|gb|AAT61473.1| ribosomal protein L3 (50S ribosomal protein L3) [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|51978577|gb|AAU20127.1| ribosomal protein L3 (50S ribosomal protein L3) [Bacillus cereus
E33L]
gi|118415104|gb|ABK83523.1| LSU ribosomal protein L3P [Bacillus thuringiensis str. Al Hakam]
gi|206732778|gb|EDZ49953.1| 50S ribosomal protein L3 [Bacillus cereus AH1134]
gi|217067429|gb|ACJ81679.1| ribosomal protein L3 [Bacillus cereus AH187]
gi|218158711|gb|ACK58703.1| ribosomal protein L3 [Bacillus cereus B4264]
gi|218534762|gb|ACK87160.1| ribosomal protein L3 [Bacillus cereus AH820]
gi|221237928|gb|ACM10638.1| ribosomal protein L3 (50S ribosomal protein L3) [Bacillus cereus
Q1]
gi|225787302|gb|ACO27519.1| 50S ribosomal protein L3 [Bacillus cereus 03BB102]
gi|227007571|gb|ACP17314.1| 50S ribosomal protein L3 [Bacillus anthracis str. CDC 684]
gi|228588966|gb|EEK46981.1| 50S ribosomal protein L3 [Bacillus cereus m1293]
gi|228595069|gb|EEK52840.1| 50S ribosomal protein L3 [Bacillus cereus ATCC 10876]
gi|228600959|gb|EEK58528.1| 50S ribosomal protein L3 [Bacillus cereus BGSC 6E1]
gi|228629569|gb|EEK86266.1| 50S ribosomal protein L3 [Bacillus cereus ATCC 4342]
gi|228694080|gb|EEL47762.1| 50S ribosomal protein L3 [Bacillus cereus Rock3-42]
gi|228776355|gb|EEM24708.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228840585|gb|EEM85847.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228846785|gb|EEM91790.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar pulsiensis
BGSC 4CC1]
gi|229268368|gb|ACQ50005.1| 50S ribosomal protein L3 [Bacillus anthracis str. A0248]
gi|296321996|gb|ADH04924.1| 50S ribosomal protein L3 [Bacillus thuringiensis BMB171]
gi|298723050|gb|EFI63948.1| 50S ribosomal protein L3 [Bacillus cereus SJ1]
gi|300374016|gb|ADK02920.1| 50S ribosomal protein L3 [Bacillus cereus biovar anthracis str. CI]
gi|324324101|gb|ADY19361.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 210
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 93/214 (43%), Positives = 133/214 (62%), Gaps = 4/214 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ G IPVTV+ + V+ +T + +GY A+Q+G + + K
Sbjct: 1 MTKGILGRKIGMTQVFAENGELIPVTVIAANPNVVLQKKTTETDGYNAIQLGFEDKREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + + +PK+ + E R D D L VG F G++VDVTG++ GKGF
Sbjct: 61 TNKPEQGHTAKASTTPKRFIREIR-DADVDGLEVGQEVKVDVFATGEIVDVTGISKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH +HG S HR GS G P RVFK KK+AGRMGG++VT++NLE+V
Sbjct: 120 QGVIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKKLAGRMGGDQVTIQNLEIV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VD +R L+LVKG VPGAKK S ++V+ + K +
Sbjct: 178 QVDTERNLLLVKGNVPGAKK-SLVVVQGAVKVSK 210
>gi|228989319|ref|ZP_04149310.1| 50S ribosomal protein L3 [Bacillus pseudomycoides DSM 12442]
gi|228995501|ref|ZP_04155169.1| 50S ribosomal protein L3 [Bacillus mycoides Rock3-17]
gi|229003126|ref|ZP_04160972.1| 50S ribosomal protein L3 [Bacillus mycoides Rock1-4]
gi|228758089|gb|EEM07288.1| 50S ribosomal protein L3 [Bacillus mycoides Rock1-4]
gi|228764230|gb|EEM13109.1| 50S ribosomal protein L3 [Bacillus mycoides Rock3-17]
gi|228770397|gb|EEM18970.1| 50S ribosomal protein L3 [Bacillus pseudomycoides DSM 12442]
Length = 210
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 94/214 (43%), Positives = 133/214 (62%), Gaps = 4/214 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+Q+G + + K
Sbjct: 1 MTKGILGRKIGMTQVFAENGELIPVTVIAATPNVVLQKKTTETDGYNAIQLGFDDKREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + + +PK+ + E R D D L VG FT G++VDVTG++ GKGF
Sbjct: 61 TNKPEQGHTAKASTTPKRFIREIR-DADVDGLEVGQEVKVEVFTAGEIVDVTGISKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH +HG S HR GS G P RVFK KK+AGRMGG++VT++NLE+V
Sbjct: 120 QGVIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKGKKLAGRMGGDQVTIQNLEIV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VD +R L+LVKG VPGAKK S ++V+ + K +
Sbjct: 178 QVDAERNLLLVKGNVPGAKK-SLVVVQGAVKVSK 210
>gi|239787563|emb|CAX84031.1| 50S ribosomal protein L3 [uncultured bacterium]
Length = 213
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 98/215 (45%), Positives = 135/215 (62%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+G++ RKLGM+ ++ +G+ + VT++ + C +V + + +GY AVQ+G +AK
Sbjct: 1 MRAGLIGRKLGMSRIFTADGKSVAVTLVKVGPCPIVGVKRGEPDGYEAVQLGYEDAKPSR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V KP RG F+ NV P++ L EFRV D G + F VG VDVTG ++GKGF
Sbjct: 61 VKKPERGVFAKANVPPQRILKEFRVD-DASGYQPGESLGLNLFEVGGRVDVTGRSVGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR F G RA+HG ++HRS GS G Q PGRVFKNKKMAG MG VT L V
Sbjct: 120 AGGMKRWGFRGGRASHGAHLTHRSPGSIGQCQTPGRVFKNKKMAGHMGDVNVTAMGLTVA 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
VD +R L+++KG VPG+ K S + +RD+ K+
Sbjct: 180 MVDLERNLLVLKGSVPGS-KGSVVFIRDAVKATGK 213
>gi|118591184|ref|ZP_01548583.1| 50S ribosomal protein L3 [Stappia aggregata IAM 12614]
gi|118436260|gb|EAV42902.1| 50S ribosomal protein L3 [Stappia aggregata IAM 12614]
Length = 225
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 125/209 (59%), Positives = 153/209 (73%), Gaps = 2/209 (0%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
MT +YN G +PVTVL L+NCQVV HRT +KNGY A+Q+GAG KVKN K +RG F+
Sbjct: 1 MTRIYNDAGEHVPVTVLRLENCQVVAHRTDEKNGYTALQLGAGTRKVKNTPKALRGHFAV 60
Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
V PK+ + EFRV ++L+ VG+ + ++ GQ VDVTG +IGKGF+GAMKRHNFGG
Sbjct: 61 AKVEPKRTVAEFRVSA-ENLIDVGAELTADHYVEGQFVDVTGTSIGKGFAGAMKRHNFGG 119
Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
RA+HG S+SHRSHGSTG QDPGRVFK KKMAG MG RVT +NL+VV D +RGLI+V
Sbjct: 120 GRASHGNSVSHRSHGSTGQCQDPGRVFKGKKMAGHMGDARVTTQNLKVVRTDVERGLIMV 179
Query: 192 KGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
+G VPGA K WILVRD+ K A+ V
Sbjct: 180 EGSVPGA-KGGWILVRDAIKKALPENVPV 207
>gi|190891355|ref|YP_001977897.1| 50S ribosomal protein L3 [Rhizobium etli CIAT 652]
gi|226730554|sp|B3PWS1|RL3_RHIE6 RecName: Full=50S ribosomal protein L3
gi|190696634|gb|ACE90719.1| 50S ribosomal protein L3 [Rhizobium etli CIAT 652]
gi|327191386|gb|EGE58412.1| 50S ribosomal protein L3 [Rhizobium etli CNPAF512]
Length = 213
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 147/215 (68%), Positives = 172/215 (80%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT VYN G +PVTVL +D CQVV RT++KNGY AVQ+GAG+AKVKN
Sbjct: 1 MRSGVIAQKVGMTRVYNDAGEHVPVTVLRMDGCQVVATRTVEKNGYTAVQLGAGQAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SK MRG F+ NV PK KL EFRV + D+LL +G+ +F GQLVDVTG TIGKGF
Sbjct: 61 TSKAMRGNFAVANVEPKAKLAEFRVSE-DNLLEIGTELKAGHFAAGQLVDVTGTTIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRH FGGLRATHGVS+SHRSHGSTG RQDPG+VFKNKKMAG MG RVT +NLEVV
Sbjct: 120 AGAMKRHGFGGLRATHGVSVSHRSHGSTGSRQDPGKVFKNKKMAGHMGQTRVTTQNLEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
S D+ RGLIL+KG VPG+ K +WI+VRD+ KSA
Sbjct: 180 STDEDRGLILIKGAVPGS-KGAWIIVRDAVKSAAK 213
>gi|302876534|ref|YP_003845167.1| 50S ribosomal protein L3 [Clostridium cellulovorans 743B]
gi|307687207|ref|ZP_07629653.1| 50S ribosomal protein L3 [Clostridium cellulovorans 743B]
gi|302579391|gb|ADL53403.1| 50S ribosomal protein L3 [Clostridium cellulovorans 743B]
Length = 209
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 82/212 (38%), Positives = 125/212 (58%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++ +K+GMT +++ + IPVTV+ C V+ +T+DK+GY A+QVG G+ +
Sbjct: 1 MKKAILGKKIGMTQIFDENRKLIPVTVVEAGPCVVIQKKTIDKDGYEAIQVGFGDKRENL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KPM+G F++ V K+ + E R+ +D V F F G+ VDV+G++ GKGF
Sbjct: 61 FNKPMKGHFAAAGVPVKRYVKELRL-EDVSGYNVKDEFKVDIFEAGEKVDVSGVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR +HG S HR+ GS G DP R FKNKK+ G MG TV NL V
Sbjct: 120 QGTIKRWGAHRGPMSHG-SKFHRAPGSMGASSDPSRTFKNKKLPGHMGAKNTTVMNLTVA 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V + +IL+KG VPG K ++++R++ K+
Sbjct: 179 KVMVDKNIILIKGAVPGPNKG-FVVIRNAVKA 209
>gi|218290005|ref|ZP_03494182.1| ribosomal protein L3 [Alicyclobacillus acidocaldarius LAA1]
gi|218239990|gb|EED07177.1| ribosomal protein L3 [Alicyclobacillus acidocaldarius LAA1]
Length = 211
Score = 209 bits (533), Expect = 2e-52, Method: Composition-based stats.
Identities = 91/214 (42%), Positives = 125/214 (58%), Gaps = 4/214 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RKLGMT V+ +G +PVTV+ C V+ R LDK+GY A+Q+G + K
Sbjct: 1 MKGILGRKLGMTQVFTEDGDVVPVTVIEAGPCVVLQKRVLDKDGYEAIQLGFADKKASRA 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G + +PK+ + E R ++ VG F G +VDVTG++ GKGF+
Sbjct: 61 TKPEIGHAAKAGTAPKRYIREIRGVNVEE-YEVGQQVKADIFAPGDIVDVTGVSKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRHN HG S HR GS G P R FK + MAGRMGG RVTV+NLEVV
Sbjct: 120 GPIKRHNQHRGPMAHG-SKYHRGVGSLGSIA-PNRTFKGQTMAGRMGGERVTVQNLEVVK 177
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
VD ++ +IL+KG VPG +NS++ +R + K
Sbjct: 178 VDPEKNVILIKGSVPGP-RNSFVTIRSAVKQPAK 210
>gi|315640161|ref|ZP_07895283.1| 50S ribosomal protein L3 [Enterococcus italicus DSM 15952]
gi|315484138|gb|EFU74612.1| 50S ribosomal protein L3 [Enterococcus italicus DSM 15952]
Length = 209
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 94/213 (44%), Positives = 130/213 (61%), Gaps = 4/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + +
Sbjct: 1 MTKGILGKKVGMTQIFTESGELIPVTVVEATPNVVLQLKTVENDGYEAVQVGYQDLREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EF+ + + L VGS F G +VDVTG T GKGF
Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFKDVELEG-LEVGSEIKVDAFQAGDIVDVTGTTKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLE+V
Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD +R +IL+KG VPGAKK S I ++ + K+
Sbjct: 178 RVDAERNVILIKGNVPGAKK-SLITIKSAVKAK 209
>gi|164686527|ref|ZP_02210555.1| hypothetical protein CLOBAR_00094 [Clostridium bartlettii DSM
16795]
gi|164604396|gb|EDQ97861.1| hypothetical protein CLOBAR_00094 [Clostridium bartlettii DSM
16795]
Length = 209
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 87/213 (40%), Positives = 124/213 (58%), Gaps = 4/213 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT ++ G IPVTV+ V +T + +GY A+QVG +AK K++
Sbjct: 1 MKGILGKKIGMTQIFTEHGEVIPVTVVEAGPVVVTQIKTTENDGYTAIQVGFQDAKEKSL 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP +G ++ N K ++ VG F G+L+DVTG++ GKGF
Sbjct: 61 NKPQKGHLAAANTLKKHLKEFRVDSVEE--YTVGQEIKADLFAAGELIDVTGISKGKGFQ 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRH THG S HR GS G PGRVFKNKK+AG MG +VTV+NLEVV
Sbjct: 119 GPIKRHGQSRGPETHG-SRYHRRPGSMGACSYPGRVFKNKKLAGHMGSVKVTVQNLEVVR 177
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VD + ILVKG +PGA K S + ++++ K++
Sbjct: 178 VDADKNFILVKGAIPGA-KGSVVTIKEAVKASK 209
>gi|146329256|ref|YP_001210151.1| 50S ribosomal protein L3 [Dichelobacter nodosus VCS1703A]
gi|166233139|sp|A5EX82|RL3_DICNV RecName: Full=50S ribosomal protein L3
gi|146232726|gb|ABQ13704.1| 50S ribosomal protein L3 [Dichelobacter nodosus VCS1703A]
Length = 212
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 90/213 (42%), Positives = 129/213 (60%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V +K+GMT +++ EG VTV+ + + +T + +GY AVQV G K
Sbjct: 1 MTMGLVGQKVGMTRIFDEEGTASAVTVIEIQPNIISQIKTDETDGYHAVQVSVGHRKSSR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+K + G F+ N+S + EFRV ++ VG + F GQ VDV +IGKG
Sbjct: 61 TTKALAGHFAKANISAAALVKEFRVDSEEIAKYEVGKPVELAIFEQGQRVDVRARSIGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KRHNF G R THG S+SHR GS G Q PGRVFK KKM+G MG +V+N+E+
Sbjct: 121 YAGTIKRHNFRGQRKTHGNSVSHRVPGSIGQNQTPGRVFKGKKMSGHMGNKMCSVQNIEI 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+D +R L+L+KG VPGA K ++++R S K+
Sbjct: 181 ARIDVERNLLLLKGSVPGA-KGGYVVIRPSVKA 212
>gi|67528204|ref|XP_661912.1| hypothetical protein AN4308.2 [Aspergillus nidulans FGSC A4]
gi|40741279|gb|EAA60469.1| hypothetical protein AN4308.2 [Aspergillus nidulans FGSC A4]
gi|259482889|tpe|CBF77796.1| TPA: 50S ribosomal protein L3 (AFU_orthologue; AFUA_4G06000)
[Aspergillus nidulans FGSC A4]
Length = 296
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 103/216 (47%), Positives = 139/216 (64%), Gaps = 3/216 (1%)
Query: 2 RSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
R+G +A K GMT +++ G+RI TVL LD QV+ H+T+D +GY AVQ+GAG N
Sbjct: 72 RTGAIAIKKGMTAIFDPETGKRISCTVLQLDRVQVIAHKTVDVHGYYAVQMGAGWKHPNN 131
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+K + G FS VSPK+ ++EFRV+ +D LLPVG + + +F GQ VD T GKGF
Sbjct: 132 VTKSLLGHFSEQGVSPKRHVYEFRVKDEDGLLPVGQLVNADWFHEGQYVDARSNTKGKGF 191
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ-DPGRVFKNKKMAGRMGGNRVTVKNLEV 179
+G MKRH FGG +HGVS++HRS GS G Q RV+ KKMAG MG + TV+NL+V
Sbjct: 192 AGVMKRHGFGGQDRSHGVSLTHRSLGSAGPSQGGGSRVYPGKKMAGNMGNEQNTVQNLKV 251
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
+ VD + GL+LV G V G K + ++D+ K
Sbjct: 252 LKVDAENGLVLVNGSVSGP-KGCVVRIQDAIKKPWP 286
>gi|319893200|ref|YP_004150075.1| LSU ribosomal protein L3p (L3e) [Staphylococcus pseudintermedius
HKU10-03]
gi|317162896|gb|ADV06439.1| LSU ribosomal protein L3p (L3e) [Staphylococcus pseudintermedius
HKU10-03]
gi|323463752|gb|ADX75905.1| ribosomal protein L3 [Staphylococcus pseudintermedius ED99]
Length = 219
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 93/222 (41%), Positives = 127/222 (57%), Gaps = 11/222 (4%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA------- 53
M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY A+Q+G
Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEAKENVVLQKKTVEVDGYNAIQIGFENKEAYK 60
Query: 54 -GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
G K +K G + +PK+ + EFR DD VG S F VG ++DVT
Sbjct: 61 KGRKTNKYATKAAEGHAKKADAAPKRFIREFRNVNVDD-YEVGQEVSVDTFEVGDIIDVT 119
Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
G + GKGF GA+KRHN +HG S HR+ GS G D RVFK +K+ GRMGGN V
Sbjct: 120 GTSKGKGFQGAIKRHNQSRGPMSHG-SHFHRAPGSIGMASDASRVFKGQKLPGRMGGNTV 178
Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
TV+NLEVV VD + +ILVKG VPG KK ++ ++ + K+
Sbjct: 179 TVQNLEVVQVDTENNVILVKGNVPGPKKG-FVQIQSAIKANK 219
>gi|118443770|ref|YP_877198.1| 50S ribosomal protein L3 [Clostridium novyi NT]
gi|166233135|sp|A0PXU6|RL3_CLONN RecName: Full=50S ribosomal protein L3
gi|118134226|gb|ABK61270.1| ribosomal protein L3 [Clostridium novyi NT]
Length = 209
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 86/212 (40%), Positives = 130/212 (61%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++ RK+GMT +++ G+ IPVTV+ C V+ +T +K+GY A+QVG + + K
Sbjct: 1 MKKAIIGRKIGMTQIFDENGKVIPVTVVEAGPCAVLQKKTEEKDGYNAIQVGFEDIREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G F+ VS K+ + EFR++ D+ VG+ F G VDVTG++ GKGF
Sbjct: 61 ANKPKKGHFAKAGVSLKRIVREFRLENIDE-YEVGTEIKADVFAAGDKVDVTGVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR NF HG S HR+ GS G DP R FKNKKM G MG + T+ N+EVV
Sbjct: 120 QGTIKRWNFHRGPMAHG-SKYHRAVGSMGAASDPSRTFKNKKMPGHMGNKKSTILNIEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V + ++L+KG +PG K +++++D+ K+
Sbjct: 179 KVMADKNVLLIKGGIPGPNKG-YVVIKDTVKA 209
>gi|256390140|ref|YP_003111704.1| 50S ribosomal protein L3 [Catenulispora acidiphila DSM 44928]
gi|256356366|gb|ACU69863.1| ribosomal protein L3 [Catenulispora acidiphila DSM 44928]
Length = 215
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 98/210 (46%), Positives = 125/210 (59%), Gaps = 2/210 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
GV+ KLGMT V++ R +PVTV+ C V R + +GY AVQ+ G K V+
Sbjct: 6 KGVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQIRKQEIDGYEAVQIAYGAVKPTKVT 65
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP G F+ V+P++ E R D +G + FT GQ+VDV+G + G GF+G
Sbjct: 66 KPEAGHFAKAGVTPRRYTVEIRTT-DAAEYSLGQEITAETFTQGQIVDVSGTSKGHGFAG 124
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRHNF GL A HGV HRS GS G PGRVFK +MAGRMG RVTV+NL V +V
Sbjct: 125 VMKRHNFKGLGAGHGVQRKHRSPGSIGACATPGRVFKGVRMAGRMGSARVTVQNLTVQAV 184
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
D ++GLILVKG +PG +LV+ S K
Sbjct: 185 DAEKGLILVKGAIPGP-NGGLVLVKTSVKK 213
>gi|302388712|ref|YP_003824533.1| LSU ribosomal protein L3P [Thermosediminibacter oceani DSM 16646]
gi|302199340|gb|ADL06910.1| LSU ribosomal protein L3P [Thermosediminibacter oceani DSM 16646]
Length = 209
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 89/210 (42%), Positives = 129/210 (61%), Gaps = 4/210 (1%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
++ KLGMT +++ G+ +PVTV+ C V+ +T + +GY A++VG + K ++
Sbjct: 4 KAILGIKLGMTQIFDEAGQAVPVTVVEAGPCVVMQKKTPEIDGYSALKVGFVDVKEHRLT 63
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP+ G F + PKK + E ++ + D VG F G+ VDVTG++IGKGF+G
Sbjct: 64 KPVLGQFRKYQLKPKKYIRELKIDEVD-KYNVGDEIKVDIFKPGERVDVTGISIGKGFAG 122
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KR NF +HG S+ HR GS G DP RVFK KKM G +G RVTV+NLE+V V
Sbjct: 123 GVKRWNFNRGPMSHG-SMYHRRPGSGG-ATDPERVFKGKKMPGHLGHERVTVQNLEIVKV 180
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
D +R L+L+KG VPG KK S + ++ + KS
Sbjct: 181 DPERNLLLIKGSVPGTKK-SLLYIKSTVKS 209
>gi|150015043|ref|YP_001307297.1| 50S ribosomal protein L3 [Clostridium beijerinckii NCIMB 8052]
gi|189042837|sp|A6LPR1|RL3_CLOB8 RecName: Full=50S ribosomal protein L3
gi|149901508|gb|ABR32341.1| ribosomal protein L3 [Clostridium beijerinckii NCIMB 8052]
Length = 209
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 86/212 (40%), Positives = 127/212 (59%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++ RK+GMT +++ +G+ IPVTV+ C VV +TL+ +GY A+QVG E + K
Sbjct: 1 MKKAIIGRKVGMTQIFDEKGKVIPVTVVEAGPCVVVQKKTLENDGYEAIQVGFDEIREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G F+ + ++ L EFR+ D VG+ F G VDV+ ++ GKGF
Sbjct: 61 ANKPRKGHFAKAGATLRRTLKEFRLD-DISQYEVGNEIKADVFGAGDKVDVSAVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G++KR N THG S HR+ GS G DP R FKNK+M G MG TV NLEVV
Sbjct: 120 QGSIKRWNQQRGPMTHG-SKFHRAPGSMGASSDPSRTFKNKRMPGHMGSVNTTVLNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V ++ LIL+KG +PG K + + ++D+ ++
Sbjct: 179 KVIAEKNLILIKGGIPGPNKGTVV-IKDTVRA 209
>gi|326385099|ref|ZP_08206769.1| 50S ribosomal protein L3 [Gordonia neofelifaecis NRRL B-59395]
gi|326196184|gb|EGD53388.1| 50S ribosomal protein L3 [Gordonia neofelifaecis NRRL B-59395]
Length = 218
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 93/214 (43%), Positives = 127/214 (59%), Gaps = 2/214 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ KLGMT V++ R +PVTV+ + V RT D++GY A+Q+ G + V
Sbjct: 7 TKGILGTKLGMTQVFDENNRVVPVTVIATGSNVVTQLRTADRDGYTAIQLAYGAIDPRKV 66
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+ G F+ V+P++ L E R+ D VG F G VDVTG + GKGF+
Sbjct: 67 NKPVAGQFAKAGVTPRRHLTEIRI-NDISEFEVGQELGADIFAEGVKVDVTGTSKGKGFA 125
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRH F GL A+HG HRS GS G PGRVFK +MAGRMG ++VT +NL V
Sbjct: 126 GVMKRHGFAGLGASHGAHRVHRSPGSIGGCATPGRVFKGTRMAGRMGSDKVTTQNLTVHK 185
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
VD + GL+L+KG +PG +K ++VRD+ K
Sbjct: 186 VDAEAGLLLIKGAIPG-RKGGIVVVRDAVKGGAK 218
>gi|281358743|ref|ZP_06245219.1| 50S ribosomal protein L3 [Victivallis vadensis ATCC BAA-548]
gi|281314770|gb|EFA98807.1| 50S ribosomal protein L3 [Victivallis vadensis ATCC BAA-548]
Length = 218
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 86/220 (39%), Positives = 122/220 (55%), Gaps = 5/220 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT VY+ +G IPVTV+ C V +T++++GY AVQ+G GE K KNV
Sbjct: 1 MKGLIGRKVGMTQVYDEKGVLIPVTVVQAGPCVVTDVKTVERDGYSAVQLGFGERKAKNV 60
Query: 62 SKPMRGFFSSV---NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
+K G + L E R D+ G+V + F +DV G T G+
Sbjct: 61 TKARAGHLAKAGVTGDKLPSVLREIRTAAGDEAPAPGTVLNADVFEANDYLDVVGTTKGR 120
Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
GF G ++R+ FGG RA+HG + R+ GS GC + PG V K K+M G MG TV+NL+
Sbjct: 121 GFQGVVRRYRFGGGRASHGGVWTRRT-GSIGCCEWPGNVIKGKRMPGHMGNVPRTVQNLQ 179
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
VV V + ++LVKG +PGA +L+R + K K
Sbjct: 180 VVRVMAEDNVLLVKGAIPGA-NGGILLIRSAIKKQTGAKK 218
>gi|304315940|ref|YP_003851085.1| 50S ribosomal protein L3 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302777442|gb|ADL68001.1| 50S ribosomal protein L3 [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 209
Score = 209 bits (532), Expect = 3e-52, Method: Composition-based stats.
Identities = 94/213 (44%), Positives = 128/213 (60%), Gaps = 4/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++ +K GMT ++ IPVTV+ C VV +T + +GY A+QVG G+ K K
Sbjct: 1 MKKAILGKKHGMTQIFVGN-EMIPVTVVEAGPCVVVQKKTKENDGYDAIQVGFGDVKEKR 59
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+ KP++G F+ NV KK L EFR+ D VGS F+VG VDV G + GKGF
Sbjct: 60 LIKPLKGHFTKANVPFKKYLREFRLD-DISSYEVGSEIKADIFSVGDRVDVIGTSKGKGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR+N HG S HR GS G DP R FK K++ G MG RVTV+NLEVV
Sbjct: 119 AGVVKRYNANRGPMAHG-SKYHRRPGSMGASSDPSRTFKGKRLPGHMGNERVTVQNLEVV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD ++ L+L+KG VPG + S +++RD+ KS
Sbjct: 178 KVDPEKNLLLIKGSVPG-IRGSLLMIRDTVKSK 209
>gi|58583207|ref|YP_202223.1| 50S ribosomal protein L3 [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84625044|ref|YP_452416.1| 50S ribosomal protein L3 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|81311762|sp|Q5GWT3|RL3_XANOR RecName: Full=50S ribosomal protein L3
gi|109893572|sp|Q2NZY5|RL3_XANOM RecName: Full=50S ribosomal protein L3
gi|212288596|sp|B2SQR0|RL3_XANOP RecName: Full=50S ribosomal protein L3
gi|58427801|gb|AAW76838.1| 50S ribosomal protein L3 [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84368984|dbj|BAE70142.1| 50S ribosomal protein L3 [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 216
Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 92/212 (43%), Positives = 127/212 (59%), Gaps = 2/212 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G V RK GM+ ++ +GR +PVT++ ++ +T++ +GY AVQ+ G + V
Sbjct: 6 SLGFVGRKAGMSRIFTEDGRSVPVTLIEATPNRIAQIKTVEVDGYSAVQITVGARRAALV 65
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP G F+ V + L+EFRV+ VG F VGQ VDV G+T GKGF
Sbjct: 66 NKPAAGHFAKAKVEAGRGLWEFRVEDAHLGDFAVGGEIKADIFEVGQKVDVQGVTKGKGF 125
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR+NF ATHG S+SHR+ GS G RQ PGRVF KKM+G MG + + +NLEVV
Sbjct: 126 QGTIKRYNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVQQSTQNLEVV 185
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +RGLI + G VPGA ++VR + K+
Sbjct: 186 KVDVERGLIAIHGAVPGAA-GGDVIVRPASKA 216
>gi|28212175|ref|NP_783119.1| 50S ribosomal protein L3 [Clostridium tetani E88]
gi|42559625|sp|Q890N9|RL3_CLOTE RecName: Full=50S ribosomal protein L3
gi|28204619|gb|AAO37056.1| LSU ribosomal protein L3P [Clostridium tetani E88]
Length = 209
Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 86/212 (40%), Positives = 127/212 (59%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++ RKLGMT +++ R +PVTV+ C VV ++++K+GY A+QVG GE + K
Sbjct: 1 MKKAIIGRKLGMTQIFDENNRVVPVTVVEAGPCTVVQKKSVEKDGYEAIQVGYGEIREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP++G F V + L EF+++ VG F G+ +DVTG + GKG+
Sbjct: 61 VNKPLKGHFEKAGVGLSRMLREFKLENV-SEYQVGQEIKVDIFEAGEKIDVTGTSKGKGY 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR N +HG S HR+ GS G P R FKNK+MAG MG + TV NLEVV
Sbjct: 120 QGIIKRWNAHRGPMSHG-SKFHRAVGSMGAASYPARTFKNKRMAGHMGNVKSTVLNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
++ LIL+KG +PG K ++++R+S K+
Sbjct: 179 KTIPEKNLILIKGGIPGPNKG-YVIIRNSIKA 209
>gi|302523993|ref|ZP_07276335.1| 50S ribosomal protein L3 [Streptomyces sp. AA4]
gi|302432888|gb|EFL04704.1| 50S ribosomal protein L3 [Streptomyces sp. AA4]
Length = 216
Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 91/211 (43%), Positives = 120/211 (56%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ KLGMT V++ + R +PVTV+ V RT DK+GY AVQ+ G + V
Sbjct: 6 MKGILGTKLGMTQVFDEQNRVVPVTVVKAGPNVVTQVRTTDKDGYAAVQLAFGAVDPRKV 65
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F V+P++ L E R D + VG + F G VDVTG + GKG++
Sbjct: 66 NKPRTGHFDKAGVTPRRHLAELRTT-DAETYEVGQEITAEVFEAGTTVDVTGTSKGKGYA 124
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRH F G A+HG HR GS G PGRVFK +MAGRMG +RVT + L V +
Sbjct: 125 GVMKRHGFKGQGASHGAQAVHRKPGSIGGCATPGRVFKGLRMAGRMGSDRVTTQGLTVHA 184
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V + GL+L+KG VPG K + VR + K
Sbjct: 185 VRAEDGLLLIKGAVPGP-KGGLLFVRSAAKG 214
>gi|85858146|ref|YP_460348.1| 50S ribosomal protein L3P [Syntrophus aciditrophicus SB]
gi|109893562|sp|Q2LQA1|RL3_SYNAS RecName: Full=50S ribosomal protein L3
gi|85721237|gb|ABC76180.1| LSU ribosomal protein L3P [Syntrophus aciditrophicus SB]
Length = 218
Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 83/212 (39%), Positives = 132/212 (62%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++ RK+GMT V+ +G IPVT + ++ + +T++K+GY A+Q+G G K
Sbjct: 10 MKKMIIGRKIGMTQVFAEDGAAIPVTAIEVEPSVITQKKTVEKDGYDAIQLGYGRIKQNK 69
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP++G F+ + + L E R + + +G + F G++VD+TG T GKGF
Sbjct: 70 ATKPLQGHFAKADKGCFRILKEMRCDQIQE-YELGQEITLDIFESGEMVDITGTTKGKGF 128
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KRH F G R++HG S+ HR+ GS G P RVFK KK+ G+MG + TVKNL +
Sbjct: 129 AGVIKRHGFRGGRSSHG-SMFHRAPGSIGASAYPSRVFKGKKLPGQMGNKQKTVKNLMIW 187
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
S+ +R LIL++G VPGA +N ++ ++ S K+
Sbjct: 188 SLRPERNLILIRGAVPGA-RNGYLFIKQSAKA 218
>gi|119963305|ref|YP_948657.1| 50S ribosomal protein L3 [Arthrobacter aurescens TC1]
gi|171704615|sp|A1R8U5|RL3_ARTAT RecName: Full=50S ribosomal protein L3
gi|119950164|gb|ABM09075.1| ribosomal protein L3 [Arthrobacter aurescens TC1]
Length = 216
Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 89/211 (42%), Positives = 125/211 (59%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT V++ + IPVTV+ D+ + R + +GY+AVQ+G G+ + V+
Sbjct: 8 KGLLGTKLGMTQVWDENNKLIPVTVVQADSNVITQLRNAEVDGYVAVQIGYGQIDPRKVT 67
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP+ G F V+P++ + E R D +G S F GQ +DV G + GKGF+G
Sbjct: 68 KPLAGHFEKAGVTPRRHVVELR-TADAASYELGQELSVEIFEAGQKIDVVGTSKGKGFAG 126
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F G+ A+HG +HR GS G P RVFK KMAGRMG R T NL V ++
Sbjct: 127 VMKRHGFHGVGASHGAHKNHRKPGSIGGASTPSRVFKGLKMAGRMGAERHTTLNLTVHAI 186
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D ++ L+L+KG VPGA + +LVR + K A
Sbjct: 187 DAEKSLLLIKGAVPGA-RGQVVLVRTAVKGA 216
>gi|17231707|ref|NP_488255.1| 50S ribosomal protein L3 [Nostoc sp. PCC 7120]
gi|42559670|sp|Q8YPH9|RL3_ANASP RecName: Full=50S ribosomal protein L3
gi|17133350|dbj|BAB75914.1| 50S ribosomal protein L3 [Nostoc sp. PCC 7120]
Length = 211
Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 84/211 (39%), Positives = 126/211 (59%), Gaps = 3/211 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ KLGMT +++ G IPVTV+ + C V ++ +GY A+QVG GE K K
Sbjct: 1 MSVGILGTKLGMTQIFDEAGVAIPVTVVQVGPCVVTQVKSKQTDGYAAIQVGYGEVKPKA 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+++P+ G + + + L E+ D +G F+VG+LVDV G +IG+GF
Sbjct: 61 LNRPLLGHLAKSSAPALRHLKEYHTDGSSD-YALGQEIKADIFSVGELVDVIGTSIGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G KR+NFG +HG S +HR+ GS G PGRV+ K+MAGR+GG RVT++ L V+
Sbjct: 120 AGNQKRNNFGRGPMSHG-SKNHRAPGSIGAGTTPGRVYPGKRMAGRLGGTRVTIRKLTVI 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
VD +R L+L+KG VPG + + + + K
Sbjct: 179 RVDAERNLLLIKGAVPGKP-GALLSIVPAKK 208
>gi|134298093|ref|YP_001111589.1| 50S ribosomal protein L3 [Desulfotomaculum reducens MI-1]
gi|172044219|sp|A4J111|RL3_DESRM RecName: Full=50S ribosomal protein L3
gi|134050793|gb|ABO48764.1| LSU ribosomal protein L3P [Desulfotomaculum reducens MI-1]
Length = 209
Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 82/213 (38%), Positives = 117/213 (54%), Gaps = 4/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++N G IPVTV+ C VV RT + +GY A+Q+G G +
Sbjct: 1 MPKGILGKKIGMTQIFNEAGVAIPVTVVEAGPCLVVQKRTPENDGYSAIQLGFGVKRENL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP +G + V P + L E +V + VG F G+ VDV G + GKGF
Sbjct: 61 LNKPTKGHLNKAGVRPVRFLRELKVDDLEA-FQVGQEIKADIFAEGEKVDVVGTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KRHNF HG R S + P R FK +K+ G G RVTV+NL+VV
Sbjct: 120 AGGIKRHNFHRGPMAHGSKYHRRPGSSAA--KGPARTFKGRKLPGHYGVERVTVQNLQVV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD +R L+ +KG VPG + +LV++S K
Sbjct: 178 KVDPERNLLAIKGAVPGP-RGGLLLVKNSVKVK 209
>gi|227530205|ref|ZP_03960254.1| ribosomal protein L3 [Lactobacillus vaginalis ATCC 49540]
gi|227349880|gb|EEJ40171.1| ribosomal protein L3 [Lactobacillus vaginalis ATCC 49540]
Length = 220
Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 80/215 (37%), Positives = 123/215 (57%), Gaps = 4/215 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT V+ G +PVTV+ + V+ +T++ +GY AVQ+G + +
Sbjct: 1 MAKGILGKKVGMTQVFTDNGELVPVTVIDVTPNVVMQIKTVENDGYNAVQLGFDDKREIL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + E R + D + VG F G+ VDVTG+T G G+
Sbjct: 61 SNKPEQGHAAKANTTPKRFIGEIRDAELGDDIKVGDEVKADVFNEGETVDVTGVTKGHGY 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G + + N +HG S HR GS G RVFK K+ GRMGG VT+++LEVV
Sbjct: 121 QGNIHKDNQSRGPMSHG-SRYHRRPGSLGPI--INRVFKGMKLPGRMGGKTVTMQHLEVV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
VD ++L+KG VPGA K S++ +++S K+
Sbjct: 178 KVDLDNNVLLIKGNVPGANK-SYVTIKNSVKANTK 211
>gi|227550720|ref|ZP_03980769.1| 50S ribosomal protein L3 [Enterococcus faecium TX1330]
gi|257878725|ref|ZP_05658378.1| ribosomal protein L3 [Enterococcus faecium 1,230,933]
gi|257881366|ref|ZP_05661019.1| ribosomal protein L3 [Enterococcus faecium 1,231,502]
gi|257885634|ref|ZP_05665287.1| ribosomal protein L3 [Enterococcus faecium 1,231,501]
gi|257888021|ref|ZP_05667674.1| ribosomal protein L3 [Enterococcus faecium 1,141,733]
gi|257890584|ref|ZP_05670237.1| ribosomal protein L3 [Enterococcus faecium 1,231,410]
gi|257893174|ref|ZP_05672827.1| ribosomal protein L3 [Enterococcus faecium 1,231,408]
gi|257896360|ref|ZP_05676013.1| ribosomal protein L3 [Enterococcus faecium Com12]
gi|257899334|ref|ZP_05678987.1| ribosomal protein L3 [Enterococcus faecium Com15]
gi|258615211|ref|ZP_05712981.1| 50S ribosomal protein L3 [Enterococcus faecium DO]
gi|260558287|ref|ZP_05830483.1| ribosomal protein L3 [Enterococcus faecium C68]
gi|261206993|ref|ZP_05921682.1| ribosomal protein L3 [Enterococcus faecium TC 6]
gi|289565372|ref|ZP_06445822.1| 50S ribosomal protein L3 [Enterococcus faecium D344SRF]
gi|293379446|ref|ZP_06625590.1| 50S ribosomal protein L3 [Enterococcus faecium PC4.1]
gi|293562946|ref|ZP_06677413.1| ribosomal protein L3 [Enterococcus faecium E1162]
gi|293567931|ref|ZP_06679272.1| ribosomal protein L3 [Enterococcus faecium E1071]
gi|293570684|ref|ZP_06681734.1| ribosomal protein L3 [Enterococcus faecium E980]
gi|294615393|ref|ZP_06695266.1| ribosomal protein L3 [Enterococcus faecium E1636]
gi|294618320|ref|ZP_06697901.1| ribosomal protein L3 [Enterococcus faecium E1679]
gi|294621078|ref|ZP_06700269.1| ribosomal protein L3 [Enterococcus faecium U0317]
gi|314937608|ref|ZP_07844934.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133a04]
gi|314942893|ref|ZP_07849706.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133C]
gi|314947971|ref|ZP_07851375.1| 50S ribosomal protein L3 [Enterococcus faecium TX0082]
gi|314950888|ref|ZP_07853957.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133A]
gi|314991464|ref|ZP_07856941.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133B]
gi|314995015|ref|ZP_07860135.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133a01]
gi|227180181|gb|EEI61153.1| 50S ribosomal protein L3 [Enterococcus faecium TX1330]
gi|257812953|gb|EEV41711.1| ribosomal protein L3 [Enterococcus faecium 1,230,933]
gi|257817024|gb|EEV44352.1| ribosomal protein L3 [Enterococcus faecium 1,231,502]
gi|257821490|gb|EEV48620.1| ribosomal protein L3 [Enterococcus faecium 1,231,501]
gi|257824075|gb|EEV51007.1| ribosomal protein L3 [Enterococcus faecium 1,141,733]
gi|257826944|gb|EEV53570.1| ribosomal protein L3 [Enterococcus faecium 1,231,410]
gi|257829553|gb|EEV56160.1| ribosomal protein L3 [Enterococcus faecium 1,231,408]
gi|257832925|gb|EEV59346.1| ribosomal protein L3 [Enterococcus faecium Com12]
gi|257837246|gb|EEV62320.1| ribosomal protein L3 [Enterococcus faecium Com15]
gi|260075461|gb|EEW63767.1| ribosomal protein L3 [Enterococcus faecium C68]
gi|260078621|gb|EEW66323.1| ribosomal protein L3 [Enterococcus faecium TC 6]
gi|289162862|gb|EFD10712.1| 50S ribosomal protein L3 [Enterococcus faecium D344SRF]
gi|291589516|gb|EFF21323.1| ribosomal protein L3 [Enterococcus faecium E1071]
gi|291591767|gb|EFF23403.1| ribosomal protein L3 [Enterococcus faecium E1636]
gi|291595414|gb|EFF26726.1| ribosomal protein L3 [Enterococcus faecium E1679]
gi|291599314|gb|EFF30340.1| ribosomal protein L3 [Enterococcus faecium U0317]
gi|291605072|gb|EFF34539.1| ribosomal protein L3 [Enterococcus faecium E1162]
gi|291609156|gb|EFF38428.1| ribosomal protein L3 [Enterococcus faecium E980]
gi|292641969|gb|EFF60135.1| 50S ribosomal protein L3 [Enterococcus faecium PC4.1]
gi|313590741|gb|EFR69586.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133a01]
gi|313593944|gb|EFR72789.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133B]
gi|313596897|gb|EFR75742.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133A]
gi|313598365|gb|EFR77210.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133C]
gi|313642985|gb|EFS07565.1| 50S ribosomal protein L3 [Enterococcus faecium TX0133a04]
gi|313645569|gb|EFS10149.1| 50S ribosomal protein L3 [Enterococcus faecium TX0082]
Length = 209
Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 91/213 (42%), Positives = 130/213 (61%), Gaps = 4/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY A+QVG + +
Sbjct: 1 MTKGILGKKVGMTQIFTESGELIPVTVVEATPNVVLQVKTMETDGYEAIQVGYQDMREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EF+ + + VG + F G ++DVTG T GKGF
Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFKNVELGE-YEVGKEITVDVFQAGDIIDVTGTTKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFKNK++AGRMGGNRVT++NLEVV
Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTIQNLEVV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD +R +IL+KG VPGAKK S I ++ + K+
Sbjct: 178 RVDAERNVILIKGNVPGAKK-SLITIKSAVKAK 209
>gi|114797091|ref|YP_761529.1| 50S ribosomal protein L3 [Hyphomonas neptunium ATCC 15444]
gi|123322946|sp|Q0BYB4|RL3_HYPNA RecName: Full=50S ribosomal protein L3
gi|114737265|gb|ABI75390.1| ribosomal protein L3 [Hyphomonas neptunium ATCC 15444]
Length = 252
Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 126/234 (53%), Positives = 158/234 (67%), Gaps = 17/234 (7%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD--------------KNGYM 47
R+GV+ARK+GMT ++ +GR +PVTVL LD CQVV R+ + +GY
Sbjct: 7 RTGVLARKVGMTRIFAADGRHVPVTVLSLDGCQVVGVRSEEERSVTTKKGGQVTRTDGYK 66
Query: 48 AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107
AV +G+G+ K KN +K +RG F+ V+PK KL EFRV D L VGS +F GQ
Sbjct: 67 AVIMGSGDKKAKNTTKALRGQFAKAGVAPKAKLKEFRVSGD--LPEVGSTVQADHFAEGQ 124
Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167
LVDV+ M+IGKGF+GAMKR NF GLRA+HGVSISHR+HGSTG QDPGRVFKNKKMAG +
Sbjct: 125 LVDVSAMSIGKGFAGAMKRWNFSGLRASHGVSISHRAHGSTGMNQDPGRVFKNKKMAGHL 184
Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
G RVT +NL VV D +RGLILVKG VPG +++ VRD+ K A+ +
Sbjct: 185 GDERVTTQNLVVVRTDVERGLILVKGSVPG-HDGTFVEVRDAVKKALPADAPAA 237
>gi|254470259|ref|ZP_05083663.1| ribosomal protein L3 [Pseudovibrio sp. JE062]
gi|211960570|gb|EEA95766.1| ribosomal protein L3 [Pseudovibrio sp. JE062]
Length = 227
Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 125/209 (59%), Positives = 157/209 (75%), Gaps = 2/209 (0%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
MT +YN G +PVTVL LDNCQVV HRT +KNGY A+Q+G G AKVKN ++ MRG F+
Sbjct: 1 MTRIYNEAGEHVPVTVLRLDNCQVVAHRTAEKNGYTALQLGVGAAKVKNTNRAMRGHFAV 60
Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
V PK+KL EFRV + ++++ VG+ + +F GQ VDVTG +IGKGF+GAMKRHNFGG
Sbjct: 61 AKVEPKRKLAEFRVSE-ENMIEVGAELTADHFLNGQFVDVTGTSIGKGFAGAMKRHNFGG 119
Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
RA+HGVSISHR+HGSTG QDPG+VFK KKMAG +G RVT +NL+VV D +RGLI+V
Sbjct: 120 GRASHGVSISHRAHGSTGQCQDPGKVFKGKKMAGHLGAERVTTQNLKVVRTDVERGLIMV 179
Query: 192 KGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
+G VPG+ K WILVRD+ K ++ V
Sbjct: 180 EGSVPGS-KGGWILVRDAIKKSLPENAPV 207
>gi|270291133|ref|ZP_06197356.1| 50S ribosomal protein L3 [Pediococcus acidilactici 7_4]
gi|304385414|ref|ZP_07367759.1| 50S ribosomal protein L3 [Pediococcus acidilactici DSM 20284]
gi|270280529|gb|EFA26364.1| 50S ribosomal protein L3 [Pediococcus acidilactici 7_4]
gi|304328621|gb|EFL95842.1| 50S ribosomal protein L3 [Pediococcus acidilactici DSM 20284]
Length = 212
Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats.
Identities = 79/214 (36%), Positives = 118/214 (55%), Gaps = 4/214 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT V+ G IPVTV+ V+ +T++ +GY A Q+G + +
Sbjct: 3 TKGILGKKVGMTQVFTEAGELIPVTVIDTTPNVVLQLKTVENDGYAAAQLGFDDKRQVLS 62
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP +G + N +PK+ + E R + + + VG + F G VDVTG T G GF
Sbjct: 63 NKPEQGHVAKANTNPKRFIHEIRDVELGEDVKVGDKIAADIFEAGDFVDVTGTTKGHGFQ 122
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +K+ HG S HR GS G RVF KK+ GRMG VT++NLE+V
Sbjct: 123 GVIKKDGQRRGPMAHG-SRYHRRPGSLGAI--INRVFPGKKLPGRMGNKTVTIQNLEIVK 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D + ++LVKG VPGAKK S+++V+ + K+
Sbjct: 180 ADTENNVLLVKGNVPGAKK-SYVVVKSTVKNTSK 212
>gi|291291685|gb|ADD91676.1| 50S ribosomal protein L3 [Enterococcus faecium]
Length = 209
Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats.
Identities = 91/213 (42%), Positives = 130/213 (61%), Gaps = 4/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY A+QVG + +
Sbjct: 1 MTKGILGKKVGMTQIFTESGELIPVTVVEATPNVVLQVKTMETDGYEAIQVGYQDMREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EF+ + + VG + F G ++DVTG T GKGF
Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFKNVELGE-YEVGKEITVDVFQAGDIIDVTGTTKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFKNK++AGRMGGNRVT++NLEVV
Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPV-TPNRVFKNKRLAGRMGGNRVTIQNLEVV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD +R +IL+KG VPGAKK S I ++ + K+
Sbjct: 178 RVDAERNVILIKGNVPGAKK-SLITIKSAVKAK 209
>gi|145256427|ref|XP_001401384.1| 54S ribosomal protein L9 [Aspergillus niger CBS 513.88]
gi|134058285|emb|CAK38476.1| unnamed protein product [Aspergillus niger]
Length = 305
Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats.
Identities = 97/223 (43%), Positives = 139/223 (62%), Gaps = 3/223 (1%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
+R+G + K GMT +Y+ G+R+P TVL LD +VV H+T K+GY AVQ+GAG +
Sbjct: 79 LRTGAITFKKGMTALYDPETGKRVPCTVLQLDRVEVVSHKTRQKHGYYAVQLGAGWRRPD 138
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
N++K + G F++ +SPK+ ++EFRV+ + LLPVG S +F GQ VD T GKG
Sbjct: 139 NLTKSLLGHFTANGISPKRHVYEFRVKDESGLLPVGQTVSADWFQEGQFVDARSDTKGKG 198
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ-DPGRVFKNKKMAGRMGGNRVTVKNLE 178
F+G MKRH FGG +HGVS++HRS GS G Q RV+ KKMAG MG + TV+NL
Sbjct: 199 FAGVMKRHGFGGQDRSHGVSLTHRSLGSAGPSQGGGSRVYPGKKMAGNMGNEQNTVQNLR 258
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
++ VD + G+++V G V G K + ++D+ K +
Sbjct: 259 ILKVDAENGIVVVNGSVSGP-KGCVVRIQDAIKKPWPEASPAT 300
>gi|134096321|ref|YP_001101396.1| 50S ribosomal protein L3 [Herminiimonas arsenicoxydans]
gi|212288400|sp|A4G9T8|RL3_HERAR RecName: Full=50S ribosomal protein L3
gi|133740224|emb|CAL63275.1| 50S ribosomal subunit protein L3 [Herminiimonas arsenicoxydans]
Length = 224
Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats.
Identities = 96/213 (45%), Positives = 125/213 (58%), Gaps = 2/213 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ RK+GM ++ +G IPVTVL + N +V +T D +GY AVQV G + V+K
Sbjct: 10 GLLGRKVGMMRIFTDDGDSIPVTVLDVSNNRVTQIKTPDVDGYSAVQVAFGSRRASRVNK 69
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQK-DDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
G + V L EFRV L VG V + S F VGQ VDV G+TIGKG++G
Sbjct: 70 ASAGHHAKAGVEAGTVLKEFRVAATAASELKVGDVIAASLFEVGQKVDVQGVTIGKGYAG 129
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH+F RATHG S SH GS G QDPGRVF K+M G +G T++NLE+ +
Sbjct: 130 TIKRHHFASGRATHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVARTMQNLEIARI 189
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D R L+LVKG VPGA KN ++V + K
Sbjct: 190 DADRQLLLVKGAVPGA-KNGQVIVSPAVKVKAK 221
>gi|83591276|ref|YP_431285.1| 50S ribosomal protein L3 [Moorella thermoacetica ATCC 39073]
gi|109893524|sp|Q2RFP7|RL3_MOOTA RecName: Full=50S ribosomal protein L3
gi|83574190|gb|ABC20742.1| LSU ribosomal protein L3P [Moorella thermoacetica ATCC 39073]
Length = 209
Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats.
Identities = 86/212 (40%), Positives = 127/212 (59%), Gaps = 4/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR G++ +K+GMT V++ GR IPVTV+ C V+ + +GY AVQVG K +
Sbjct: 1 MRKGILGKKIGMTQVFDETGRAIPVTVIQAGPCVVIRKKETSTDGYDAVQVGFEPVKERK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP+ G+F+ V+P + + EFR++ + VG F+ G+ VDVTG++ GKGF
Sbjct: 61 VNKPLLGYFNKAGVTPFRYIREFRLENSGE-YQVGQEIKADVFSPGEKVDVTGISKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KRH F HG S HR GS + P RVFK +++ G +G RVTV+ LEVV
Sbjct: 120 AGGIKRHGFHRGPMEHG-SKYHRRPGSLA-AKGPARVFKGRRLPGHLGAVRVTVQGLEVV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
D +R L+L+KG VPG + + +++S K
Sbjct: 178 RNDPERNLLLIKGSVPGPRHGLLV-IKNSVKG 208
>gi|116251540|ref|YP_767378.1| 50S ribosomal protein L3 [Rhizobium leguminosarum bv. viciae 3841]
gi|123261675|sp|Q1MIE1|RL3_RHIL3 RecName: Full=50S ribosomal protein L3
gi|115256188|emb|CAK07269.1| putative 50S ribosomal protein L3 [Rhizobium leguminosarum bv.
viciae 3841]
Length = 213
Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats.
Identities = 147/215 (68%), Positives = 171/215 (79%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT VYN G +PVTVL ++ CQVV RT++KNGY AVQ+GAG+AKVKN
Sbjct: 1 MRSGVIAQKVGMTRVYNDAGEHVPVTVLRMEGCQVVATRTVEKNGYTAVQLGAGQAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SK MRG F+ NV PK KL EFRV + D LL VG+ +F GQLVDVTG TIGKGF
Sbjct: 61 TSKAMRGNFAIANVEPKAKLTEFRVSE-DQLLEVGTEIKAGHFAAGQLVDVTGTTIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRH FGGLRATHGVS+SHRSHGSTG RQDPG+VFKNKKMAG MG RVT +NLEVV
Sbjct: 120 AGAMKRHGFGGLRATHGVSVSHRSHGSTGSRQDPGKVFKNKKMAGHMGQTRVTTQNLEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
S D+ RGLIL+KG VPG+ K +WI+VRD+ KSA
Sbjct: 180 STDEDRGLILIKGAVPGS-KGAWIIVRDAVKSAAK 213
>gi|253577179|ref|ZP_04854499.1| 50S ribosomal protein L3 [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251843423|gb|EES71451.1| 50S ribosomal protein L3 [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 207
Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats.
Identities = 83/211 (39%), Positives = 115/211 (54%), Gaps = 4/211 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +KLGMT V+ EG IPVTV+ + V+ + L+ +GY A+Q+G + K
Sbjct: 1 MKGILGKKLGMTQVFTPEGNVIPVTVIEASSNVVLQKKDLENDGYEAIQLGYSDKKEARA 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G +PK+ + E R D VG F G+ VDVTG++ GKGF
Sbjct: 61 NKPEVGHAKKAGTTPKRYVREIRGV-DLAGYEVGQEVKVDIFAEGEFVDVTGISKGKGFQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR HG S HR GS G RVFK K + G MG VT++NLEVV
Sbjct: 120 GVIKRWGQSRGPMAHG-SRYHRRPGSMGSIA-ANRVFKGKNLPGHMGHETVTIQNLEVVK 177
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R ++LVKG +PG KNS++ V+ + K
Sbjct: 178 VDAERNVLLVKGSIPGP-KNSFVKVKQTTKK 207
>gi|320199504|gb|EFW74094.1| LSU ribosomal protein L3p (L3e) [Escherichia coli EC4100B]
Length = 199
Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats.
Identities = 91/201 (45%), Positives = 126/201 (62%), Gaps = 2/201 (0%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
MT ++ +G IPVTV+ ++ +V + L +GY A+QV G K V+KP G F+
Sbjct: 1 MTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRVTKPEAGHFAK 60
Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
V + L+EFR+ + ++ VG S F + VDVTG + GKGF+G +KR NF
Sbjct: 61 AGVEAGRGLWEFRLAEGEE-FTVGQSISVELFADVKKVDVTGTSKGKGFAGTVKRWNFRT 119
Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV VD +R L+LV
Sbjct: 120 QDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVDAERNLLLV 179
Query: 192 KGCVPGAKKNSWILVRDSFKS 212
KG VPGA S ++V+ + K+
Sbjct: 180 KGAVPGA-TGSDLIVKPAVKA 199
>gi|132952|sp|P28600|RL3_BACST RecName: Full=50S ribosomal protein L3
gi|40102|emb|CAA47402.1| ribosomal protein L3 [Geobacillus stearothermophilus]
Length = 213
Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats.
Identities = 85/204 (41%), Positives = 119/204 (58%), Gaps = 3/204 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT ++ G IPVTV+H V+ +T++ +GY A+Q+G + K
Sbjct: 1 MTKGILGRKIGMTQIFAENGDLIPVTVIHATPNVVLQKKTIENDGYEAIQLGFEDISEKR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP G + N +PK+ + E R + VG F+ G +VDVTG++ GKGF
Sbjct: 61 ANKPQIGHAAKANTAPKRFIREIRGANI-NEYEVGQEVKVDIFSEGDIVDVTGISKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH HG S HR GS G P RVFK K + GRMGG RVT++NL++V
Sbjct: 120 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGAIA-PNRVFKTKNLPGRMGGERVTIQNLKIV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWI 204
VD +R L+L+KG VPG +K I
Sbjct: 178 KVDPERNLLLIKGNVPGPRKGLVI 201
>gi|108757306|ref|YP_631567.1| 50S ribosomal protein L3 [Myxococcus xanthus DK 1622]
gi|123374502|sp|Q1D706|RL3_MYXXD RecName: Full=50S ribosomal protein L3
gi|108461186|gb|ABF86371.1| ribosomal protein L3 [Myxococcus xanthus DK 1622]
Length = 224
Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats.
Identities = 96/222 (43%), Positives = 133/222 (59%), Gaps = 3/222 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT V+N EG +PVTV+ + CQVV RT +K+ Y AV +G GE + K +
Sbjct: 1 MKGLIGKKIGMTQVFNDEGNLVPVTVIDVGTCQVVGKRTPEKDNYSAVTIGFGEIREKIL 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+ RGFF N ++ L EFRV ++ VG F G+LVDVTG+T G+GF
Sbjct: 61 NLAERGFFKKANAPYRRHLKEFRVTPEEAASFNVGDAVKADMFAKGELVDVTGITKGRGF 120
Query: 121 SGAMKRHNFG-GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
SG M+R NF THG R G+ G R+ PGRV+ NKKM G G ++VT +NL V
Sbjct: 121 SGVMRRWNFKGSQTKTHGTHEYQRHPGAIGQRKTPGRVYPNKKMPGHYGVDQVTTQNLTV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
V VD ++GL+LVKG V G N + +R S K+A+ + K +
Sbjct: 181 VDVDVEKGLVLVKGAVAG-HNNGVVYIRPSIKAAMRAQHKAA 221
>gi|251799642|ref|YP_003014373.1| 50S ribosomal protein L3 [Paenibacillus sp. JDR-2]
gi|247547268|gb|ACT04287.1| ribosomal protein L3 [Paenibacillus sp. JDR-2]
Length = 207
Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats.
Identities = 80/211 (37%), Positives = 113/211 (53%), Gaps = 4/211 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +KLGMT V+ EG +PVTV+ C V+ + + +GY AVQ G + K
Sbjct: 1 MKGILGKKLGMTQVFTAEGNVVPVTVIEAGPCVVLQKKDQENDGYEAVQFGFSDKKEARA 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
KP G N +PK+ + E R + VG F G+ VDVTG++ GKGF+
Sbjct: 61 IKPEIGHAKKANTAPKRYVREIRGINLGE-YEVGQEVKADLFAEGEFVDVTGISKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR HG S HR GS G Q RV K K + G MG VT++ LE++
Sbjct: 120 GVIKRWGQSTGPMAHG-SRYHRGPGSMGSIQ-ANRVPKGKHLPGHMGHETVTIQKLEIIR 177
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R +ILVKG +PG KN ++ V+ + K+
Sbjct: 178 VDAERNVILVKGSIPGP-KNGFVKVKQTVKN 207
>gi|254422678|ref|ZP_05036396.1| ribosomal protein L3 [Synechococcus sp. PCC 7335]
gi|196190167|gb|EDX85131.1| ribosomal protein L3 [Synechococcus sp. PCC 7335]
Length = 212
Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats.
Identities = 89/209 (42%), Positives = 123/209 (58%), Gaps = 3/209 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ KLGMT V++ G IPVTV+ C V +T +GY +VQ+G GE K K
Sbjct: 1 MSVGILGTKLGMTQVFDETGNAIPVTVIQAGPCVVTQIKTEKTDGYSSVQIGYGEVKEKA 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+++P G SP + L E+RV D +G + F GQ +DV+G++IGKGF
Sbjct: 61 LNRPKLGHLKKSGASPLRHLREYRVS-DTGEFELGQALAADRFEAGQTIDVSGISIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G KR+NF +HG S +HR+ GSTG PGRV+ KKMAGRMG +VT++ L VV
Sbjct: 120 AGNQKRNNFRRGPMSHG-SKNHRAPGSTGAGTTPGRVYPGKKMAGRMGSEKVTIRKLSVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
VD R L+LVKG VPG + + + +
Sbjct: 179 RVDSDRNLLLVKGGVPGKA-GTLLNITPA 206
>gi|229818240|ref|ZP_04448522.1| hypothetical protein BIFANG_03538 [Bifidobacterium angulatum DSM
20098]
gi|229784491|gb|EEP20605.1| hypothetical protein BIFANG_03538 [Bifidobacterium angulatum DSM
20098]
Length = 216
Score = 208 bits (529), Expect = 4e-52, Method: Composition-based stats.
Identities = 83/212 (39%), Positives = 121/212 (57%), Gaps = 2/212 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R ++ RKLGM+ V++ G +PVT++ + V +T + +GY AVQ+G G+ V
Sbjct: 7 RKALLGRKLGMSQVWDENGFFVPVTLVDVSTNVVTAIKTEETDGYTAVQIGYGQIDPTKV 66
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+ G F+ V+P++ L E R + + +G + F G VDVTG T GKGF+
Sbjct: 67 TKPLAGHFAKAGVTPRRHLVEVR-EDNATEYELGQELTAEVFEEGAEVDVTGTTKGKGFA 125
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR F R THG + R GS G P R+ K K+MAGRMG TV+NL +VS
Sbjct: 126 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTSTVQNLTIVS 185
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D + G++ +KG +PG K +LVR + K A
Sbjct: 186 ADVENGVLAIKGAIPGP-KGGIVLVRSAVKGA 216
>gi|304405616|ref|ZP_07387275.1| 50S ribosomal protein L3 [Paenibacillus curdlanolyticus YK9]
gi|304345655|gb|EFM11490.1| 50S ribosomal protein L3 [Paenibacillus curdlanolyticus YK9]
Length = 207
Score = 208 bits (529), Expect = 4e-52, Method: Composition-based stats.
Identities = 84/211 (39%), Positives = 120/211 (56%), Gaps = 4/211 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT V+ EG +PVTV+ V+ + + +GY AVQ+G + K KN
Sbjct: 1 MKGILGKKIGMTQVFTAEGNVVPVTVIEAGPNVVLQKKDQENDGYEAVQLGFVDKKEKNS 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP +G N +PK+ + E R + VG V FT G+ VDVTG++ GKGF
Sbjct: 61 TKPAQGHAKKANTAPKRYIREIRGINLGE-YEVGQVIKADVFTAGEFVDVTGVSKGKGFQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR +HG S HR GS G Q RV K K++ G MG +T++NLEVV
Sbjct: 120 GVIKRWGQSTGPMSHG-SRYHRGPGSMGSIQ-ANRVPKGKRLPGHMGSETITIQNLEVVR 177
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R +ILVKG +PG KN+ + V+ + K
Sbjct: 178 VDAERNVILVKGSIPGP-KNALVKVKLTVKK 207
>gi|283782758|ref|YP_003373512.1| 50S ribosomal protein L3 [Gardnerella vaginalis 409-05]
gi|297242968|ref|ZP_06926906.1| ribosomal protein L3 [Gardnerella vaginalis AMD]
gi|298253073|ref|ZP_06976865.1| ribosomal protein L3 [Gardnerella vaginalis 5-1]
gi|283442144|gb|ADB14610.1| 50S ribosomal protein L3 [Gardnerella vaginalis 409-05]
gi|296889179|gb|EFH27913.1| ribosomal protein L3 [Gardnerella vaginalis AMD]
gi|297532468|gb|EFH71354.1| ribosomal protein L3 [Gardnerella vaginalis 5-1]
Length = 216
Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats.
Identities = 84/212 (39%), Positives = 121/212 (57%), Gaps = 2/212 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+ ++ RKLGM+ V++ G +PVT++ + V +T++ +GY AVQ+G G+ V
Sbjct: 7 RTALLGRKLGMSQVWDENGFFVPVTLVEVATNVVTAVKTVESDGYCAVQLGYGQIDPTKV 66
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+ G F+ V+P++ L E R + D G + F G VDVTG T GKGF+
Sbjct: 67 TKPLAGHFAKAGVTPRRHLAEVRTENAAD-YQPGQELTAELFAEGSEVDVTGTTKGKGFA 125
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR F R THG + R GS G P R+ K K+MAGRMG T NL +VS
Sbjct: 126 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTSTALNLTIVS 185
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D + G++ +KG VPG K + +LVR + K A
Sbjct: 186 SDVENGILAIKGAVPGP-KGAIVLVRSAVKGA 216
>gi|309789667|ref|ZP_07684248.1| ribosomal protein L3 [Oscillochloris trichoides DG6]
gi|308228403|gb|EFO82050.1| ribosomal protein L3 [Oscillochloris trichoides DG6]
Length = 209
Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats.
Identities = 88/212 (41%), Positives = 128/212 (60%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M SG++ RKLGM V++ +G IPVTV+ C V RT++++GY AVQ+G + + +
Sbjct: 1 MISGMLGRKLGMMQVFSDKGEVIPVTVIAAGPCIVTQVRTVERDGYAAVQIGYEQVEPRK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP +G + + + + G V + F GQ +DV+G + G+GF
Sbjct: 61 LTKPQQGHLKAA--NAMLRYLREFPADNPQEHTPGEVINVELFKPGQKIDVSGTSKGRGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KRH F G THG S HR+ GS G PGRV+K +KMAGRMGG RVT++NLEVV
Sbjct: 119 AGVVKRHGFRGGPKTHGQSDRHRAPGSIGAGTTPGRVWKGQKMAGRMGGKRVTIQNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V ++ LILVKG VPGA+ + +R + K+
Sbjct: 179 EVLPEKNLILVKGSVPGARTG-LLEIRRAVKA 209
>gi|328955914|ref|YP_004373247.1| LSU ribosomal protein L3P [Coriobacterium glomerans PW2]
gi|328456238|gb|AEB07432.1| LSU ribosomal protein L3P [Coriobacterium glomerans PW2]
Length = 206
Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats.
Identities = 89/209 (42%), Positives = 120/209 (57%), Gaps = 3/209 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M S ++ RK+GMT V++ +PVTV+ C V +T +GY AVQ+G G+ + K+
Sbjct: 1 MVSMILGRKIGMTQVWDENDNVVPVTVIQAGPCYVSQVKTEATDGYDAVQIGFGDIRAKH 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V++PM G F+ V P + L E RV + VG + + F + VDV G + GKGF
Sbjct: 61 VNRPMAGHFAKAGVEPVRYLREVRV-PAGEQHSVGDPVTVADFEGTEKVDVIGTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR THG S HR GS G P RV K KMAG MG +RVTVKNL VV
Sbjct: 120 QGRIKRWGQHRGPMTHG-SHFHRHPGSIGQCAYPSRVLKGLKMAGHMGNDRVTVKNLSVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
+D ++ LILVKG VPGA K+ + +R +
Sbjct: 179 RIDAEQNLILVKGAVPGA-KSGLVCIRMA 206
>gi|306821620|ref|ZP_07455218.1| 50S ribosomal protein L3 [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304550365|gb|EFM38358.1| 50S ribosomal protein L3 [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 207
Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats.
Identities = 91/210 (43%), Positives = 120/210 (57%), Gaps = 3/210 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
++ +KLGMT ++ +GR IPVTV+ V +T + +GY AVQ GE K KNV
Sbjct: 1 MKAIMGKKLGMTQIFAEDGRLIPVTVIEAGPMVVTQIKTKENDGYEAVQCAYGEIKEKNV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP++G F V K+ L EF+V D + + F VG VD + GKGF
Sbjct: 61 NKPLKGHFKKAGVGSKRHLREFKVANIAD-YQLAGEINVDVFAVGDKVDAVATSKGKGFQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRH THG S HR GS G DP RVFK KK+AG MG R T+KNLEVV
Sbjct: 120 GPIKRHGQSRGPETHG-SHYHRGPGSMGMCSDPSRVFKGKKLAGHMGFERTTIKNLEVVL 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
VD + L+LVKG VPG KK ++++++ K
Sbjct: 179 VDKDKNLVLVKGSVPGPKKG-LVILKEAHK 207
>gi|298207727|ref|YP_003715906.1| 50S ribosomal protein L3 [Croceibacter atlanticus HTCC2559]
gi|83850364|gb|EAP88232.1| 50S ribosomal protein L3 [Croceibacter atlanticus HTCC2559]
Length = 205
Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats.
Identities = 85/208 (40%), Positives = 120/208 (57%), Gaps = 4/208 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT +++ G+ IP TV+ C V RT + +GY A+Q+G + K
Sbjct: 1 MSGLIGKKIGMTSIFDENGKNIPCTVIQAGPCVVTQVRTSEVDGYKALQLGFDDKADKRA 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
S G F SPK K+ EF+ +DD +G + F G+ VDV+G + GKGF
Sbjct: 61 SNAAVGHFKKAGTSPKYKVAEFKKFEDD--FNLGDSVTVEMFKEGEFVDVSGTSKGKGFQ 118
Query: 122 GAMKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH F G +ATHG R+ GS G P RVFK KMAG+MG +V V+NL V+
Sbjct: 119 GVVKRHGFGGVGQATHGQHNRLRAPGSIGAASYPARVFKGMKMAGQMGNEKVKVQNLRVL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
V + LI+VKG VPG KNS++ ++
Sbjct: 179 KVVADKNLIVVKGAVPG-HKNSYVTIQK 205
>gi|225432181|ref|XP_002268657.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|297736812|emb|CBI26013.3| unnamed protein product [Vitis vinifera]
Length = 307
Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats.
Identities = 103/212 (48%), Positives = 140/212 (66%), Gaps = 2/212 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+G +A K GM+ +++ G R+P+TVL LD+ V +T +K G A+QVG G+ K K++
Sbjct: 59 RTGAIAVKCGMSALWDKWGARVPITVLWLDDNIVSQVKTFEKEGLNALQVGCGQKKAKHL 118
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F + V K+KL EF V + D LLPVG+ +F GQ VDVTG+T GKGF
Sbjct: 119 TKPEVGHFRAQGVPLKRKLREFPVTE-DALLPVGTTIGVRHFVPGQYVDVTGITRGKGFQ 177
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR F G+ A+HG S+SHRS GSTG R PG+VFK KKM GRMGG + TVKN+ V
Sbjct: 178 GGMKRWGFKGMPASHGASLSHRSIGSTGQRDAPGKVFKGKKMPGRMGGKQRTVKNVWVYK 237
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+D R L+ V+G VPGA+ N ++ ++D+
Sbjct: 238 IDPTRNLMWVRGQVPGAEGN-FVFIKDAVYKK 268
>gi|168187814|ref|ZP_02622449.1| ribosomal protein L3 [Clostridium botulinum C str. Eklund]
gi|169294352|gb|EDS76485.1| ribosomal protein L3 [Clostridium botulinum C str. Eklund]
Length = 209
Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats.
Identities = 86/212 (40%), Positives = 130/212 (61%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++ RK+GMT +++ G+ IPVTV+ C V+ ++ +K+GY A+QVG + + K
Sbjct: 1 MKKAIIGRKIGMTQIFDENGKVIPVTVVEAGPCAVLQKKSEEKDGYNAIQVGFEDIREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G F+ VS K+ + EFR++ D+ VG+ F G VDVTG++ GKGF
Sbjct: 61 ANKPKKGHFAKAGVSLKRIVKEFRLENIDE-YEVGTEIKADVFEAGDKVDVTGVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR NF HG S HR+ GS G DP R FKNKKM G MG + TV N+EVV
Sbjct: 120 QGTIKRWNFHRGPMAHG-SKYHRAVGSMGAASDPSRTFKNKKMPGHMGNKKSTVLNIEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V + ++L+KG +PG K +++++D+ K+
Sbjct: 179 KVMADKNVLLIKGGIPGPNKG-YVVIKDTVKA 209
>gi|325663062|ref|ZP_08151512.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 4_1_37FAA]
gi|331086669|ref|ZP_08335746.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 9_1_43BFAA]
gi|325470516|gb|EGC73746.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 4_1_37FAA]
gi|330409835|gb|EGG89270.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 226
Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats.
Identities = 91/228 (39%), Positives = 124/228 (54%), Gaps = 19/228 (8%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++A K+GMT ++N +G PVTVL C V +T++ +GY AVQVG + K K
Sbjct: 1 MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQIKTVENDGYSAVQVGFVDKKDKI 60
Query: 61 VSKPMR----------------GFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
V+ G F VS K+ + EF+ + D+ + F
Sbjct: 61 VNVDKNGKKTIVHRHGTTKAEKGHFDKAGVSSKRFVREFKFENADE-FELAQEIKADIFA 119
Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
G VD T ++ GKGF GA+KRHN THG S HR GS G DP +VFK KKM
Sbjct: 120 AGDKVDATAISKGKGFQGAIKRHNQHRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKMP 178
Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
G MG R+T++NLE+V VD + LILVKG VPG KK S + +++S K+
Sbjct: 179 GHMGSKRITIQNLEIVRVDAENNLILVKGSVPGPKK-SLVTIKESVKA 225
>gi|325282640|ref|YP_004255181.1| 50S ribosomal protein L3 [Deinococcus proteolyticus MRP]
gi|324314449|gb|ADY25564.1| 50S ribosomal protein L3 [Deinococcus proteolyticus MRP]
Length = 206
Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats.
Identities = 93/211 (44%), Positives = 123/211 (58%), Gaps = 7/211 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ K+GMT ++ + R +PVTV+ C VV +T + +GY AVQ+G G+ K K +
Sbjct: 1 MKGILGTKIGMTQIWKDD-RAVPVTVILAGPCPVVQRKTNEVDGYEAVQIGFGDRKEKGL 59
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G ++SP + L EFR + G F G+ +DVTG + GKGF
Sbjct: 60 NKPQLGHLKKADISPVRYLREFRDFSPE-----GDEVRVDVFGEGEKIDVTGTSKGKGFQ 114
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR NF G A+HG HR GS G R+ PGRV+K KKMAG MG RVTV+NLEVV
Sbjct: 115 GVMKRWNFAGGPASHGAKKWHRRPGSIGQRKTPGRVYKGKKMAGHMGDERVTVQNLEVVE 174
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V LILVKG VPGA +++R + K
Sbjct: 175 VRPDENLILVKGAVPGA-NGGLVILRGAVKG 204
>gi|262277094|ref|ZP_06054887.1| 50S ribosomal protein L3 [alpha proteobacterium HIMB114]
gi|262224197|gb|EEY74656.1| 50S ribosomal protein L3 [alpha proteobacterium HIMB114]
Length = 260
Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats.
Identities = 104/219 (47%), Positives = 138/219 (63%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V +KLGMT + G +PVTVL ++ +VV +K GY AV VG G K
Sbjct: 1 MAIGLVGKKLGMTQRFFENGESLPVTVLKIEKAKVVDVINKEKRGYSAVLVGYGHIKNSK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++K M+GFF+ + PKK L EFR++ L G+ + + VDV TIGKGF
Sbjct: 61 LTKQMKGFFAKKSQEPKKILKEFRLENT-KELKPGTEINLDVLKDKKYVDVRAKTIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G+MKRHNFGG+RATHGVSISHR+HGSTG QDPG+VFK KKMAG MG T LEVV
Sbjct: 120 AGSMKRHNFGGMRATHGVSISHRAHGSTGQCQDPGKVFKGKKMAGHMGAKYRTTLGLEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
D + L+ +KG VPG+ KNS++ ++++ K+ K
Sbjct: 180 EADLENNLLYLKGAVPGS-KNSYVEIQEAIKNKNKSSIK 217
>gi|297564037|ref|YP_003683010.1| 50S ribosomal protein L3 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296848486|gb|ADH70504.1| 50S ribosomal protein L3 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 216
Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats.
Identities = 97/210 (46%), Positives = 127/210 (60%), Gaps = 2/210 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
GV+ KLGMT V++ G+ +PVTVL C V RT D +GY A+Q+G G+ + V+
Sbjct: 7 KGVLGEKLGMTQVFDDAGKMVPVTVLKAGPCVVSRIRTPDTDGYSAIQLGYGQINPRKVN 66
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP+ + + +++P++ E R D +G + F GQ VDVTG + GKGF+G
Sbjct: 67 KPLGDYLRAHDLTPRRHYVEVRTT-DATEYTLGQEVTADSFETGQKVDVTGKSKGKGFAG 125
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F GL A+HG HRS GS G PGRVFK +MAGRMG R TV+NL V SV
Sbjct: 126 VMKRHGFRGLSASHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNVRKTVQNLTVHSV 185
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
D ++GLILVKG VPG +LVR + K
Sbjct: 186 DAEKGLILVKGAVPGP-NGGLVLVRTAVKG 214
>gi|258543821|ref|ZP_05704055.1| 50S ribosomal protein L3 [Cardiobacterium hominis ATCC 15826]
gi|258520910|gb|EEV89769.1| 50S ribosomal protein L3 [Cardiobacterium hominis ATCC 15826]
Length = 216
Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats.
Identities = 94/213 (44%), Positives = 132/213 (61%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V +K+GMT ++N +G VTV+ + + +TL +GY AVQV GE K
Sbjct: 5 MTMGLVGQKIGMTRIFNEDGSACAVTVIEVKPNIISQIKTLATDGYNAVQVSVGERKTNR 64
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
SK + G F+ NV+ + EFR+ +D +GS S F+ GQ VDV G ++GKG
Sbjct: 65 TSKGLAGHFAKANVAAGVVIKEFRIAAEDVAQFSLGSAVDVSLFSEGQRVDVRGRSVGKG 124
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G +KRH+F G R THG S+SHR GS G Q PGRVFK KKM+G +G + +NLE+
Sbjct: 125 FAGTIKRHHFSGQRKTHGNSLSHRVPGSIGQNQTPGRVFKGKKMSGHLGNKMRSTQNLEI 184
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG VPGA K ++++R S K+
Sbjct: 185 ARVDGERNLLLIKGAVPGA-KGGFVVIRPSVKA 216
>gi|302336382|ref|YP_003801589.1| LSU ribosomal protein L3P [Olsenella uli DSM 7084]
gi|301320222|gb|ADK68709.1| LSU ribosomal protein L3P [Olsenella uli DSM 7084]
Length = 206
Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats.
Identities = 91/209 (43%), Positives = 123/209 (58%), Gaps = 3/209 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M S ++ RK+GMT V++ + +PVTV+ C V +T +GY AVQ+G G+ K+
Sbjct: 1 MVSTILGRKIGMTQVWDEDDNVVPVTVIQAGPCTVSQVKTKATDGYDAVQIGFGDITAKH 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KPM G F+ V P + L E RV +D + G S + F + VDVTG + GKGF
Sbjct: 61 VNKPMAGHFAKAGVEPMRYLREVRV-EDGEEHSCGDQVSVADFAEVKSVDVTGTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR NF THG S + R GS G P RV K MAG MG RVTVKNL++V
Sbjct: 120 QGTIKRWNFSRGPMTHG-SRNQRKPGSIGQCAYPARVRKGLHMAGHMGDERVTVKNLKLV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
VD ++ L+LVKG VPG KN+ + +R +
Sbjct: 179 RVDVEQNLMLVKGAVPGG-KNALVSIRMA 206
>gi|228472276|ref|ZP_04057042.1| 50S ribosomal protein L3 [Capnocytophaga gingivalis ATCC 33624]
gi|228276479|gb|EEK15203.1| 50S ribosomal protein L3 [Capnocytophaga gingivalis ATCC 33624]
Length = 205
Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats.
Identities = 85/208 (40%), Positives = 128/208 (61%), Gaps = 4/208 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT +++ G+ IP T++ C V RT + +GY A+Q+G + K K+
Sbjct: 1 MSGLIGKKVGMTSIFDENGKNIPCTIIEAGPCVVTQVRTKEVDGYEALQLGFDDKKEKHT 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SK G F+ V+PKKKL EF+ + +G + +F G+ VDVTG + GKGF
Sbjct: 61 SKAAAGHFAKAGVTPKKKLVEFQGF--ESTYKLGDTITAEFFVEGEFVDVTGTSKGKGFQ 118
Query: 122 GAMKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G ++RH F G ++THG R+ GS G P RVFK +MAGRMG +VTV+NL+V+
Sbjct: 119 GVVRRHGFGGVGQSTHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGAEKVTVQNLKVL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
V ++ LI++KGCVPG KN+++ +
Sbjct: 179 KVIPEKNLIILKGCVPG-HKNAYVTIHK 205
>gi|93005314|ref|YP_579751.1| 50S ribosomal protein L3 [Psychrobacter cryohalolentis K5]
gi|109893543|sp|Q1QDI6|RL3_PSYCK RecName: Full=50S ribosomal protein L3
gi|92392992|gb|ABE74267.1| LSU ribosomal protein L3P [Psychrobacter cryohalolentis K5]
Length = 212
Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats.
Identities = 93/213 (43%), Positives = 130/213 (61%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V +K GMT V+ G IPVTV+ + ++ + D +GY A+QV G +
Sbjct: 1 MAIGLVGKKCGMTRVFTEAGASIPVTVVEISANRITQVKNTDVDGYQAIQVTTGTRRDSR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+ +G F+ V+ + ++EFR D + +G F GQ+VDVTG + GKG
Sbjct: 61 VTAAQKGHFAKAGVAAGRGVWEFRANDSDLEGREIGGEILADLFEQGQMVDVTGNSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KRHNF ATHG S+SHR+ GSTG Q PG+VFK KKM G+MG RVTV+ LEV
Sbjct: 121 FQGGVKRHNFSMQDATHGNSVSHRAIGSTGQNQSPGKVFKGKKMPGQMGNKRVTVQGLEV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+SVD + GL+++KG +PGA ++VR S K+
Sbjct: 181 ISVDVENGLLVIKGAIPGA-TGGDVIVRPSVKA 212
>gi|227497181|ref|ZP_03927429.1| ribosomal protein L3 [Actinomyces urogenitalis DSM 15434]
gi|226833312|gb|EEH65695.1| ribosomal protein L3 [Actinomyces urogenitalis DSM 15434]
Length = 222
Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats.
Identities = 88/209 (42%), Positives = 125/209 (59%), Gaps = 2/209 (0%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ KLGMT +++ G PVTV+ +D V RT++ +GY AVQ+ GE + V+KP
Sbjct: 16 LLGTKLGMTQIWDENGVLRPVTVVRVDTNVVTQVRTIETDGYEAVQLAFGEIAERKVTKP 75
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+ G F+ V+P++ + E R G + F VGQ VDV G + GKGF+G M
Sbjct: 76 LAGHFAKAGVAPRRHVAEVRTS-LASEFEAGQELTADLFEVGQKVDVQGTSKGKGFAGVM 134
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KRH F G+ A+HG +HR GS G PGR+FK +MAGRMG TV+NL+V VD
Sbjct: 135 KRHGFAGVSASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGHETTTVQNLKVRGVDV 194
Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213
++G++LV G +PG K S ++VR + K A
Sbjct: 195 EKGVLLVNGAIPGP-KGSVVVVRTAVKGA 222
>gi|207723095|ref|YP_002253500.1| 50s ribosomal protein l3 [Ralstonia solanacearum IPO1609]
gi|206588288|emb|CAQ18986.1| 50s ribosomal protein l3 [Ralstonia solanacearum IPO1609]
Length = 209
Score = 207 bits (528), Expect = 6e-52, Method: Composition-based stats.
Identities = 87/203 (42%), Positives = 120/203 (59%), Gaps = 2/203 (0%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
MT V+ +G IPVTVL + +V +T + +GY AVQV G + V+KP+ G +
Sbjct: 1 MTRVFTDDGDSIPVTVLEVGGNRVTQIKTDETDGYTAVQVTFGSRRASRVTKPLAGHLAK 60
Query: 72 VNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130
V + + EFR+ L +G F+ GQ +DV G TIGKG++G +KR+NF
Sbjct: 61 AGVEAGEIIAEFRIDAAKAAELKLGDTIDVDLFSAGQKIDVQGTTIGKGYAGTIKRYNFS 120
Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190
RA+HG S SH GS G QDPGRVF K+M G MG TV+NL +V VD +R L+L
Sbjct: 121 SGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTRTVQNLVIVRVDAERKLLL 180
Query: 191 VKGCVPGAKKNSWILVRDSFKSA 213
VKG VPGA K+ +++V + K+
Sbjct: 181 VKGAVPGA-KSGFVVVSPAVKAK 202
>gi|209548935|ref|YP_002280852.1| 50S ribosomal protein L3 [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|226730555|sp|B5ZYT5|RL3_RHILW RecName: Full=50S ribosomal protein L3
gi|209534691|gb|ACI54626.1| ribosomal protein L3 [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 213
Score = 207 bits (528), Expect = 6e-52, Method: Composition-based stats.
Identities = 146/215 (67%), Positives = 171/215 (79%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT VYN G +PVTVL +D CQVV RT++KNGY AVQ+GAG+AKVKN
Sbjct: 1 MRSGVIAQKVGMTRVYNDAGEHVPVTVLRMDGCQVVATRTVEKNGYTAVQLGAGQAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SK MRG F+ NV PK K+ EFRV + D LL +G+ +F GQLVDVTG TIGKGF
Sbjct: 61 TSKAMRGNFAVANVEPKAKVAEFRVSE-DQLLEIGTEIKAGHFAAGQLVDVTGTTIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRH FGGLRATHGVS+SHRSHGSTG RQDPG+VFKNKKMAG MG RVT +NLEVV
Sbjct: 120 AGAMKRHGFGGLRATHGVSVSHRSHGSTGSRQDPGKVFKNKKMAGHMGQTRVTTQNLEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
S D+ RGLIL+KG VPG+ K +WI+VRD+ KSA
Sbjct: 180 STDEDRGLILIKGAVPGS-KGAWIIVRDAVKSAAK 213
>gi|307244784|ref|ZP_07526885.1| 50S ribosomal protein L3 [Peptostreptococcus stomatis DSM 17678]
gi|306491882|gb|EFM63934.1| 50S ribosomal protein L3 [Peptostreptococcus stomatis DSM 17678]
Length = 209
Score = 207 bits (528), Expect = 6e-52, Method: Composition-based stats.
Identities = 91/212 (42%), Positives = 128/212 (60%), Gaps = 4/212 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT V+ G +PVTV+ + +T++ +GY A+QVG +AK K +
Sbjct: 1 MKGILGKKIGMTQVFTENGEVVPVTVVEAGPVSITQIKTVENDGYQAIQVGFVDAKEKAL 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP +G + V K+KL EFRV + VG F G+ +DVTG++ GKGF
Sbjct: 61 NKPQKGHLAKAGV-LKRKLKEFRVDSLEG-YEVGQELKADIFAEGEKIDVTGISKGKGFQ 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRH THG S HR GS G PGRVFKNKK+AG MG +VTV+NLEVV
Sbjct: 119 GPIKRHGQSRGPETHG-SRYHRRPGSMGACSYPGRVFKNKKLAGHMGSVKVTVQNLEVVK 177
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD ++ L+L+KG +PGA K S + V+ + K +
Sbjct: 178 VDAEKNLLLIKGAIPGA-KGSVVTVKAAIKGS 208
>gi|282857362|ref|ZP_06266599.1| 50S ribosomal protein L3 [Pyramidobacter piscolens W5455]
gi|282584862|gb|EFB90193.1| 50S ribosomal protein L3 [Pyramidobacter piscolens W5455]
Length = 208
Score = 207 bits (528), Expect = 6e-52, Method: Composition-based stats.
Identities = 96/208 (46%), Positives = 133/208 (63%), Gaps = 2/208 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGMT V+N G+ +PVTV+ C VV RT +KNGY A+ +G GE K +
Sbjct: 1 MSLGILGQKLGMTRVFNEAGQSVPVTVIAAGPCPVVDVRTPEKNGYSAILLGLGERKPRK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP++G + V P + L EFR++ + G + + F G+ V VTG + GKGF
Sbjct: 61 VTKPLQGMYDRCGVRPCRWLREFRIENSAE-YKAGQIVDVAVFAEGETVSVTGTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR NFGGL+A+HGVS+SHR S+G P +FK K M G +G RVT+KNL VV
Sbjct: 120 AGVMKRWNFGGLQASHGVSVSHRKPASSGASSYPSHIFKGKAMPGHLGNERVTIKNLTVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
+VD + L+L+KG VPGA KN +L+
Sbjct: 180 AVDKENNLLLIKGAVPGA-KNGLVLIHK 206
>gi|166031659|ref|ZP_02234488.1| hypothetical protein DORFOR_01359 [Dorea formicigenerans ATCC
27755]
gi|166028636|gb|EDR47393.1| hypothetical protein DORFOR_01359 [Dorea formicigenerans ATCC
27755]
Length = 226
Score = 207 bits (528), Expect = 6e-52, Method: Composition-based stats.
Identities = 88/228 (38%), Positives = 125/228 (54%), Gaps = 19/228 (8%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++A K+GMT ++N +G PVTVL C V +T++ +GY AVQVG + K K
Sbjct: 1 MKKAILATKVGMTQIFNEDGTLTPVTVLQAGPCVVTQIKTVENDGYEAVQVGFVDKKDKT 60
Query: 61 VSKP----------------MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
V+K +G F+ V+ K+ + EF+ + D + F
Sbjct: 61 VNKDKNGKKEIVHRHGVTKAEQGHFAKAGVTGKRFVKEFKFENAAD-YALAQEIKADIFE 119
Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
G +D T ++ GKGF GA+KRHN HG S HR GS G DP +VFK KKM
Sbjct: 120 AGDKIDATAISKGKGFQGAIKRHNQHRGPMAHG-SKFHRHQGSNGAASDPSKVFKGKKMP 178
Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
G MG ++T++NLEVV VD + L+LVKG VPG KK S + +R++ K+
Sbjct: 179 GHMGSKKITIQNLEVVRVDAENNLLLVKGSVPGPKK-SLVTIREAVKA 225
>gi|220913432|ref|YP_002488741.1| 50S ribosomal protein L3 [Arthrobacter chlorophenolicus A6]
gi|254803650|sp|B8HD06|RL3_ARTCA RecName: Full=50S ribosomal protein L3
gi|219860310|gb|ACL40652.1| ribosomal protein L3 [Arthrobacter chlorophenolicus A6]
Length = 216
Score = 207 bits (528), Expect = 6e-52, Method: Composition-based stats.
Identities = 90/211 (42%), Positives = 124/211 (58%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT V++ + IPVTV+ D+ + R + +GY+AVQ+G G+ + V+
Sbjct: 8 KGLLGTKLGMTQVWDENNKLIPVTVVQADSNVITQLRNAEVDGYVAVQIGYGQIDPRKVT 67
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP+ G F V+P++ + E R D +G S F GQ +DV G T GKGF+G
Sbjct: 68 KPLAGHFEKAGVTPRRHVVELR-TADAAEYELGQELSVELFAAGQKIDVIGTTKGKGFAG 126
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F G+ A+HG +HR GS G P RVFK KMAGRMG R T NL V +V
Sbjct: 127 VMKRHGFHGVGASHGAHKNHRKPGSIGGASTPSRVFKGMKMAGRMGAVRHTTLNLTVHAV 186
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D ++ L+L+KG VPGA + + VR + K A
Sbjct: 187 DAEKSLLLIKGAVPGA-RGQVVFVRTAVKGA 216
>gi|23336501|ref|ZP_00121715.1| COG0087: Ribosomal protein L3 [Bifidobacterium longum DJO10A]
gi|23466130|ref|NP_696733.1| 50S ribosomal protein L3 [Bifidobacterium longum NCC2705]
gi|189440569|ref|YP_001955650.1| 50S ribosomal protein L3 [Bifidobacterium longum DJO10A]
gi|227546476|ref|ZP_03976525.1| ribosomal protein L3 [Bifidobacterium longum subsp. infantis ATCC
55813]
gi|239621010|ref|ZP_04664041.1| 50S ribosomal protein L3 [Bifidobacterium longum subsp. infantis
CCUG 52486]
gi|296454870|ref|YP_003662014.1| 50S ribosomal protein L3 [Bifidobacterium longum subsp. longum
JDM301]
gi|312133874|ref|YP_004001213.1| rplc [Bifidobacterium longum subsp. longum BBMN68]
gi|317483450|ref|ZP_07942440.1| 50S ribosomal protein L3 [Bifidobacterium sp. 12_1_47BFAA]
gi|322689929|ref|YP_004209663.1| 50S ribosomal protein L3 [Bifidobacterium longum subsp. infantis
157F]
gi|322691870|ref|YP_004221440.1| 50S ribosomal protein L3 [Bifidobacterium longum subsp. longum JCM
1217]
gi|42559648|sp|Q8G417|RL3_BIFLO RecName: Full=50S ribosomal protein L3
gi|226725135|sp|B3DQ13|RL3_BIFLD RecName: Full=50S ribosomal protein L3
gi|23326866|gb|AAN25369.1| 50S ribosomal protein L3 [Bifidobacterium longum NCC2705]
gi|189429004|gb|ACD99152.1| Ribosomal protein L3 [Bifidobacterium longum DJO10A]
gi|227213025|gb|EEI80904.1| ribosomal protein L3 [Bifidobacterium longum subsp. infantis ATCC
55813]
gi|239516111|gb|EEQ55978.1| 50S ribosomal protein L3 [Bifidobacterium longum subsp. infantis
CCUG 52486]
gi|291516469|emb|CBK70085.1| LSU ribosomal protein L3P [Bifidobacterium longum subsp. longum F8]
gi|296184302|gb|ADH01184.1| ribosomal protein L3 [Bifidobacterium longum subsp. longum JDM301]
gi|311773167|gb|ADQ02655.1| RplC [Bifidobacterium longum subsp. longum BBMN68]
gi|316915136|gb|EFV36568.1| 50S ribosomal protein L3 [Bifidobacterium sp. 12_1_47BFAA]
gi|320456726|dbj|BAJ67348.1| 50S ribosomal protein L3 [Bifidobacterium longum subsp. longum JCM
1217]
gi|320461265|dbj|BAJ71885.1| 50S ribosomal protein L3 [Bifidobacterium longum subsp. infantis
157F]
Length = 213
Score = 207 bits (528), Expect = 6e-52, Method: Composition-based stats.
Identities = 84/212 (39%), Positives = 118/212 (55%), Gaps = 2/212 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R ++ +KLGM+ V++ G +PVT++ + V +T + +GY AVQ+G G V
Sbjct: 4 RKALLGKKLGMSQVWDENGFFVPVTLVDVSTNVVTAVKTEESDGYKAVQLGYGAIDPTKV 63
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+ G F+ V+P++ L E R D D G + F G VDVTG T GKGF+
Sbjct: 64 TKPLAGHFAKAGVTPRRHLVEVRTD-DVDQFEAGQELAADLFEEGAEVDVTGTTKGKGFA 122
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR F R THG + R GS G P R+ K K+MAGRMG T +NL VVS
Sbjct: 123 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTATTQNLTVVS 182
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D + G++ +KG +PG K +LVR + K A
Sbjct: 183 ADVENGILAIKGAIPGP-KGGIVLVRSAVKGA 213
>gi|125975384|ref|YP_001039294.1| 50S ribosomal protein L3P [Clostridium thermocellum ATCC 27405]
gi|256005329|ref|ZP_05430295.1| ribosomal protein L3 [Clostridium thermocellum DSM 2360]
gi|281419346|ref|ZP_06250361.1| 50S ribosomal protein L3 [Clostridium thermocellum JW20]
gi|166233136|sp|A3DJH2|RL3_CLOTH RecName: Full=50S ribosomal protein L3
gi|125715609|gb|ABN54101.1| LSU ribosomal protein L3P [Clostridium thermocellum ATCC 27405]
gi|255990765|gb|EEU00881.1| ribosomal protein L3 [Clostridium thermocellum DSM 2360]
gi|281406966|gb|EFB37229.1| 50S ribosomal protein L3 [Clostridium thermocellum JW20]
gi|316939500|gb|ADU73534.1| 50S ribosomal protein L3 [Clostridium thermocellum DSM 1313]
Length = 212
Score = 207 bits (528), Expect = 6e-52, Method: Composition-based stats.
Identities = 89/214 (41%), Positives = 130/214 (60%), Gaps = 2/214 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M ++ RK+GMT V++ +G IPVTV+ VV + + +GY +V+V G+ + K
Sbjct: 1 MEKFMLGRKIGMTQVFDEDGLLIPVTVIEAGPITVVQKKKPETDGYNSVRVAFGDVQEKR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP +G F+ + ++PKK + EFRV D + F G VDVTG++ GKGF
Sbjct: 61 LNKPEKGLFAKLGIAPKKYIREFRVDDPDKYELKQEIKVEEMFQPGDRVDVTGISKGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR + THG S+ HR GS G +P RVFK KK+ G MG RVTV+NL+VV
Sbjct: 121 AGVIKRFGNRRGKETHG-SMYHRRVGSMGANTNPARVFKGKKLPGHMGVERVTVQNLDVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VD +R L+LVKG VPGA K ++++D+ K+
Sbjct: 180 KVDAERNLMLVKGAVPGA-KGGLLMIKDTVKARK 212
>gi|285017320|ref|YP_003375031.1| 50s ribosomal protein l3 [Xanthomonas albilineans GPE PC73]
gi|283472538|emb|CBA15043.1| probable 50s ribosomal protein l3 [Xanthomonas albilineans]
Length = 216
Score = 207 bits (528), Expect = 7e-52, Method: Composition-based stats.
Identities = 95/212 (44%), Positives = 128/212 (60%), Gaps = 2/212 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G V RK GM+ V+ +GR IPVT++ ++ +T++ +GY AVQ+ G +V V
Sbjct: 6 SLGFVGRKAGMSRVFTEDGRSIPVTLIEATPNRITQLKTVENDGYSAVQITVGTRRVALV 65
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP G F+ V + L+EFRV+ +G F VGQ VDV G+T GKGF
Sbjct: 66 NKPAAGHFAKAKVEAGRGLWEFRVEDAQLGDFAIGGEIKVDIFAVGQKVDVQGVTKGKGF 125
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRHNF ATHG S+SHR GS G RQ PGRVF KKM+G MG + + +NLEVV
Sbjct: 126 QGTIKRHNFRMGDATHGNSLSHRVGGSLGQRQTPGRVFLGKKMSGHMGAVQQSTQNLEVV 185
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +RGLI ++G VPGA ++VR + K+
Sbjct: 186 KVDVERGLIAIRGAVPGAA-GGDVIVRPASKA 216
>gi|282899952|ref|ZP_06307913.1| Ribosomal protein L3 [Cylindrospermopsis raciborskii CS-505]
gi|281195222|gb|EFA70158.1| Ribosomal protein L3 [Cylindrospermopsis raciborskii CS-505]
Length = 212
Score = 207 bits (528), Expect = 7e-52, Method: Composition-based stats.
Identities = 91/211 (43%), Positives = 126/211 (59%), Gaps = 3/211 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ KLGMT +++ G IPVTV+ C V +T +GY A+QVG GE K K
Sbjct: 1 MSVGILGTKLGMTQIFDEAGVSIPVTVIQAGPCTVTQVKTQPTDGYCAIQVGYGEVKPKA 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP G + + P + L E+R D +G F+VGQ+VDV G +IG+GF
Sbjct: 61 LNKPKLGHLAKSSAGPVRYLNEYRTDAAGD-YALGQEIKADIFSVGQIVDVIGTSIGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G KR+NFG +HG S +HR+ GS G PGRV+ K+MAGR+GG+RVTV+ L VV
Sbjct: 120 AGNQKRNNFGRGPMSHG-SKNHRAPGSIGAGTTPGRVYPGKRMAGRLGGSRVTVRKLTVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
VD +R LIL+KG +PG + V + K
Sbjct: 179 KVDAERNLILIKGAIPGKP-GGLVNVVPTTK 208
>gi|308235496|ref|ZP_07666233.1| 50S ribosomal protein L3 [Gardnerella vaginalis ATCC 14018]
gi|311115167|ref|YP_003986388.1| 50S ribosomal protein L3 [Gardnerella vaginalis ATCC 14019]
gi|310946661|gb|ADP39365.1| 50S ribosomal protein L3 [Gardnerella vaginalis ATCC 14019]
Length = 216
Score = 207 bits (528), Expect = 7e-52, Method: Composition-based stats.
Identities = 83/212 (39%), Positives = 120/212 (56%), Gaps = 2/212 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+ ++ RKLGM+ V++ G +PVT++ + V +T + +GY AVQ+G G+ V
Sbjct: 7 RTALLGRKLGMSQVWDENGLFVPVTLVEVATNVVTAVKTEETDGYCAVQLGYGQIDPTKV 66
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+ G F+ V+P++ L E R + D G + F G VDVTG T GKGF+
Sbjct: 67 TKPLAGHFAKAGVTPRRHLAEVRTENAAD-YKPGQELTAEVFAEGAEVDVTGTTKGKGFA 125
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR F R THG + R GS G P R+ K K+MAGRMG T NL +VS
Sbjct: 126 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTSTALNLTIVS 185
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D + G++ +KG +PG K + +LVR + K A
Sbjct: 186 SDVENGILAIKGAIPGP-KGAIVLVRSAVKGA 216
>gi|89902555|ref|YP_525026.1| 50S ribosomal protein L3 [Rhodoferax ferrireducens T118]
gi|109893546|sp|Q21RV8|RL3_RHOFD RecName: Full=50S ribosomal protein L3
gi|89347292|gb|ABD71495.1| LSU ribosomal protein L3P [Rhodoferax ferrireducens T118]
Length = 228
Score = 207 bits (528), Expect = 7e-52, Method: Composition-based stats.
Identities = 88/216 (40%), Positives = 127/216 (58%), Gaps = 3/216 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GM ++ EG IPVTV+ + N +V +T + +GY+A+QV G K V
Sbjct: 6 SLGLLGRKVGMMRLFTDEGDSIPVTVVDVSNNRVTQVKTQENDGYVALQVTFGARKASRV 65
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVG--SVFSPSYFTVGQLVDVTGMTIGKG 119
+KP G + V + + EFR+ D +V + F VGQ VDV G TIGKG
Sbjct: 66 TKPAAGHLAKAGVEAGEIIREFRLTADVAAQYKAGATVPVTAVFAVGQKVDVQGTTIGKG 125
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G +KRH+ RA+HG S SH GS G QDPGRVF K+M G +G + VT +NL+V
Sbjct: 126 FAGTIKRHHMKSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDDTVTTQNLDV 185
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
+ +D+ R L+++KG VPG+ ++ VR + K N
Sbjct: 186 IRIDEARQLLMIKGAVPGSA-GGFVTVRPAVKVKAN 220
>gi|300870647|ref|YP_003785518.1| 50S ribosomal protein L3 [Brachyspira pilosicoli 95/1000]
gi|42559690|sp|Q9FA04|RL3_BRAPL RecName: Full=50S ribosomal protein L3
gi|11036693|gb|AAG27264.1| putative L3 ribosomal protein [Brachyspira pilosicoli]
gi|300688346|gb|ADK31017.1| 50S ribosomal protein L3 [Brachyspira pilosicoli 95/1000]
Length = 218
Score = 207 bits (528), Expect = 7e-52, Method: Composition-based stats.
Identities = 84/208 (40%), Positives = 118/208 (56%), Gaps = 3/208 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RKLGMT V++ G I VTV+ C V+ R +K+GY A+Q+G G K K++
Sbjct: 1 MVGIIGRKLGMTTVFDETGNAIAVTVVEAGPCTVMQVRDNEKDGYNAIQLGYGAVKEKHL 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
KP G F N+ PKK L EFR+ D VG F G +DV+ ++ G+GF+
Sbjct: 61 KKPQIGQFKKANLEPKKYLKEFRLD-DSSAYTVGQELKVDIFQAGDFIDVSSLSKGRGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRHN+ G +HG S R GS GC P RV+K K M G MG T++NL+VV
Sbjct: 120 GVMKRHNYDGGPMSHG-SNFRRRAGSIGCNSYPARVWKGKGMPGHMGNTLTTIQNLKVVE 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209
+ + LI++KG +PGA N + + +
Sbjct: 179 IRPEDNLIMIKGSIPGAI-NGIVKITQA 205
>gi|310829585|ref|YP_003961942.1| ribosomal protein L3 [Eubacterium limosum KIST612]
gi|308741319|gb|ADO38979.1| ribosomal protein L3 [Eubacterium limosum KIST612]
Length = 209
Score = 207 bits (528), Expect = 7e-52, Method: Composition-based stats.
Identities = 82/212 (38%), Positives = 118/212 (55%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++ +K+GMT ++ G +PVTV+ C VV + +D +GY AVQ+ G+ K K
Sbjct: 1 MKKAIIGKKIGMTQIFTENGTVVPVTVVEAGPCVVVQKKNMDVDGYEAVQLAYGDVKEKR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP++G + V KK + EF++ D D G V F G VD++G + GKGF
Sbjct: 61 VTKPLKGHYDKHGVEYKKVIREFKLD-DYDAFETGQVIKADMFEAGDKVDISGKSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HRS GS G P RV K K + G+MG VT NLEVV
Sbjct: 120 QGVIKRHGQSRGPMAHG-SKYHRSPGSMGASAYPARVMKGKNLPGQMGNKNVTALNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V + ++L+KG VPG + S + ++ S K+
Sbjct: 179 QVSAEDNILLIKGAVPGP-RGSLVSIKSSVKA 209
>gi|260905721|ref|ZP_05914043.1| 50S ribosomal protein L3 [Brevibacterium linens BL2]
Length = 224
Score = 207 bits (528), Expect = 7e-52, Method: Composition-based stats.
Identities = 85/209 (40%), Positives = 117/209 (55%), Gaps = 2/209 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT V++ + +PVTV+ + V R + +GY AVQ+ GE + V+
Sbjct: 16 KGLLGTKLGMTQVWDEQNNLVPVTVVAAGSNVVTQVRNEETDGYPAVQIAFGEIDPRKVN 75
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP G F V+P++ L E R D +G F G VDVT T GKG +G
Sbjct: 76 KPTAGHFEKAGVTPRRHLVELR-TADAADYSLGQELGVDTFDAGIKVDVTAKTKGKGTAG 134
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F G+ A+HG +HR GS G PGRVFK +MAGRMG + T +NL + +V
Sbjct: 135 VMKRHGFHGVGASHGQHRNHRKPGSIGGAATPGRVFKGMRMAGRMGAVKHTTQNLTIHAV 194
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
D + +L+KG VPG K + +LVR + K
Sbjct: 195 DTENNFLLIKGAVPGP-KGAVVLVRSAAK 222
>gi|327438278|dbj|BAK14643.1| ribosomal protein L3 [Solibacillus silvestris StLB046]
Length = 209
Score = 207 bits (528), Expect = 7e-52, Method: Composition-based stats.
Identities = 89/213 (41%), Positives = 128/213 (60%), Gaps = 4/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ G IPVTV+ V+ ++++ +GY A+Q+G + +VK
Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEATPNVVLQKKSVETDGYEAIQLGFEDKRVKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EFR + VG F G ++DVTG+T GKGF
Sbjct: 61 SNKPEQGHVAKANTAPKRFIREFR-NLEAATYEVGQEVKVEIFAEGDVIDVTGVTKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH +HG S HR GS G P RVFK KK+ G+MGG VT++NLE+V
Sbjct: 120 QGVIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKQKKLPGQMGGTVVTIQNLEIV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD +R L+LVKG VPG+KK + + V+ + KS
Sbjct: 178 KVDVERNLLLVKGNVPGSKK-ALVTVKTAIKSK 209
>gi|308070975|ref|YP_003872580.1| 50S ribosomal protein L3 [Paenibacillus polymyxa E681]
gi|310644202|ref|YP_003948961.1| 50S ribosomal protein l3 [Paenibacillus polymyxa SC2]
gi|305860254|gb|ADM72042.1| 50S ribosomal protein L3 [Paenibacillus polymyxa E681]
gi|309249153|gb|ADO58720.1| 50S ribosomal protein L3 [Paenibacillus polymyxa SC2]
Length = 207
Score = 207 bits (528), Expect = 7e-52, Method: Composition-based stats.
Identities = 82/211 (38%), Positives = 116/211 (54%), Gaps = 4/211 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +KLGMT V+ EG + VTV+ C V+ + L+ +GY A+Q+G + K K
Sbjct: 1 MKGILGKKLGMTQVFTPEGNVLAVTVIEAGPCVVLQKKDLENDGYEAIQLGFSDKKEKRS 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G N +PK+ + E R VG FT G+ VDVTG++ GKGF+
Sbjct: 61 NKPEAGHAKKANTAPKRYVRELRGIDLAA-YEVGQELKADVFTEGEFVDVTGISKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR HG S HR GS G Q RV K K + G MG VT++ LEVV
Sbjct: 120 GVIKRWGQSRGPMAHG-SRYHRGPGSMGSIQ-ANRVPKGKHLPGHMGHETVTIQRLEVVK 177
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+D +R ++LVKG +PG KNS++ V ++ K
Sbjct: 178 IDTERNVLLVKGSIPGP-KNSFVKVLETVKK 207
>gi|119502924|ref|ZP_01625009.1| 50S ribosomal protein L3 [marine gamma proteobacterium HTCC2080]
gi|119461270|gb|EAW42360.1| 50S ribosomal protein L3 [marine gamma proteobacterium HTCC2080]
Length = 211
Score = 207 bits (528), Expect = 7e-52, Method: Composition-based stats.
Identities = 98/212 (46%), Positives = 129/212 (60%), Gaps = 1/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK GMT V+ EG +PVTV+ + +V + L+ +GY A+QV G+ K
Sbjct: 1 MTIGIVGRKSGMTRVFTDEGVSVPVTVVEVLPNRVTQIKDLETDGYRAIQVTTGDRKASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VSKP G ++ + L+EFR+ ++ VGS + F GQ VDV G + GKGF
Sbjct: 61 VSKPAAGHYAKAGTAAGDGLWEFRLDGSEETFEVGSELTVERFEQGQKVDVAGRSKGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KR NF ATHG S+SHR+ GS G Q PGRVFK KKMAG MG RVT + LEVV
Sbjct: 121 QGAVKRWNFSMQDATHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQGLEVV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+D +R L+L+KG VPGA ++VR + K
Sbjct: 181 RIDSERNLLLIKGAVPGAP-GGHVIVRPTVKG 211
>gi|326773963|ref|ZP_08233245.1| 50S ribosomal protein L3 [Actinomyces viscosus C505]
gi|326636102|gb|EGE37006.1| 50S ribosomal protein L3 [Actinomyces viscosus C505]
Length = 222
Score = 207 bits (528), Expect = 7e-52, Method: Composition-based stats.
Identities = 88/209 (42%), Positives = 125/209 (59%), Gaps = 2/209 (0%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ KLGMT +++ G PVTV+ +D V RT++ +GY AVQ+ G+ V+KP
Sbjct: 16 LLGTKLGMTQIWDENGVLRPVTVVRVDTNVVTQVRTIETDGYEAVQLAFGDIDASKVTKP 75
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+ G F+ V P++ + E R G + F VGQLVDVTG + GKGF+G M
Sbjct: 76 LAGHFAKAGVEPRRHVAEIRTS-LASEFTPGQELAADTFEVGQLVDVTGTSKGKGFAGVM 134
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KRH F G+ A+HG +HR GS G PGR+FK +MAGRMG R TV+NL++ +D
Sbjct: 135 KRHGFAGVGASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGHARRTVQNLKIRGIDV 194
Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+G++LV G +PG K S ++VR + K A
Sbjct: 195 DKGVLLVNGAIPGP-KGSVVVVRTAVKGA 222
>gi|253682166|ref|ZP_04862963.1| 50S ribosomal protein L3 [Clostridium botulinum D str. 1873]
gi|253561878|gb|EES91330.1| 50S ribosomal protein L3 [Clostridium botulinum D str. 1873]
Length = 209
Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats.
Identities = 89/212 (41%), Positives = 130/212 (61%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++ RK+GMT +++ G+ IPVTV+ C V+ +T +K+GY A+QVG + + K
Sbjct: 1 MKKAIIGRKVGMTQIFDENGKVIPVTVVEAGPCAVLQKKTEEKDGYNAIQVGFEDIREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G F+ VS K+ + EFR++ D+ VGS F G VDVTG++ GKGF
Sbjct: 61 ANKPKKGHFAKAGVSLKRIVREFRLENIDE-YEVGSEIKADVFEAGDKVDVTGVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR NF HG S HR+ GS G DP R FKNKKM G MG + TV NLEVV
Sbjct: 120 QGTIKRWNFHRGPMAHG-SKYHRAVGSMGAASDPSRTFKNKKMPGHMGHKKSTVLNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V + +IL+KG +PG K +++++++ K+
Sbjct: 179 KVMADKNVILIKGGIPGPNKG-YVVIKNTVKA 209
>gi|299143194|ref|ZP_07036274.1| 50S ribosomal protein L3 [Peptoniphilus sp. oral taxon 386 str.
F0131]
gi|298517679|gb|EFI41418.1| 50S ribosomal protein L3 [Peptoniphilus sp. oral taxon 386 str.
F0131]
Length = 210
Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats.
Identities = 90/208 (43%), Positives = 134/208 (64%), Gaps = 3/208 (1%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ +K+GMT +++ EG+ PVTV+ + VV +T++ +GY AVQV G K + V+KP
Sbjct: 4 LIGKKIGMTQIFDEEGKVTPVTVIEAEPNVVVQKKTVEVDGYNAVQVATGFVKERRVNKP 63
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
++G F+ V KK L EFR ++ ++ +G F+VG+ +DVTG + GKG G +
Sbjct: 64 LKGHFAKAGVECKKNLREFRTEEVEN-YNIGDEIKVDLFSVGEFIDVTGTSKGKGTQGVI 122
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
+RH FG R THG S HR G G PG+VFKN +MAG+MG +VTV+NLEVV VD
Sbjct: 123 RRHGFGRGRETHG-SKFHRMPGGMGAATYPGKVFKNHRMAGKMGNEQVTVQNLEVVRVDL 181
Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212
++ LILVKG +PG KK + ++++ K+
Sbjct: 182 EKNLILVKGAIPGPKKG-IVTLKETVKA 208
>gi|296130495|ref|YP_003637745.1| 50S ribosomal protein L3 [Cellulomonas flavigena DSM 20109]
gi|296022310|gb|ADG75546.1| 50S ribosomal protein L3 [Cellulomonas flavigena DSM 20109]
Length = 219
Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats.
Identities = 91/211 (43%), Positives = 126/211 (59%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
+ ++ KLGMT V++ GR +PVTVL + V R+ + +GY AVQ+ G+ + V+
Sbjct: 11 TALLGTKLGMTQVWDEAGRLVPVTVLAVGTNVVTQVRSAESDGYAAVQLAYGQIDPRKVT 70
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP++G F V+P++ + E R +G + F GQ+VDVTG T GKG +G
Sbjct: 71 KPLKGHFEKAGVTPRRHVAEIRTSN-AAEFTLGQEITAGAFEAGQVVDVTGTTKGKGTAG 129
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F G+ A+HG +HR GS G P RVFK KMAGRMG R T +NL V +V
Sbjct: 130 VMKRHGFHGVGASHGAHRNHRKPGSIGGASTPSRVFKGLKMAGRMGVARQTTQNLTVHAV 189
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D ++GL+LVKG VPG K ++VR + K A
Sbjct: 190 DAEKGLLLVKGAVPGP-KGGVVVVRSAVKGA 219
>gi|291457202|ref|ZP_06596592.1| 50S ribosomal protein L3 [Bifidobacterium breve DSM 20213]
gi|291381037|gb|EFE88555.1| 50S ribosomal protein L3 [Bifidobacterium breve DSM 20213]
Length = 213
Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats.
Identities = 85/212 (40%), Positives = 118/212 (55%), Gaps = 2/212 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R ++ +KLGM+ V++ G +PVT++ + V +T + +GY AVQ+G G V
Sbjct: 4 RKALLGKKLGMSQVWDENGFFVPVTLVDVSTNVVTAVKTEESDGYKAVQLGYGAIDPTKV 63
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+ G F+ V+P++ L E R D D G + F G VDVTG T GKGF+
Sbjct: 64 TKPLAGHFAKAGVTPRRHLVEVRTD-DVDQFEAGQELAADLFEEGTEVDVTGTTKGKGFA 122
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR F R THG + R GS G P R+ K K+MAGRMG T +NL VVS
Sbjct: 123 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTATTQNLTVVS 182
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D + G+I +KG +PG K +LVR + K A
Sbjct: 183 ADVENGIIAIKGAIPGP-KGGIVLVRSAVKGA 213
>gi|319952196|ref|YP_004163463.1| lsu ribosomal protein l3p [Cellulophaga algicola DSM 14237]
gi|319420856|gb|ADV47965.1| LSU ribosomal protein L3P [Cellulophaga algicola DSM 14237]
Length = 205
Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats.
Identities = 85/206 (41%), Positives = 123/206 (59%), Gaps = 4/206 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT +++ G+ IP TV+ L C V RT + +GY A+Q+G + K
Sbjct: 1 MSGLIGKKVGMTSIFDENGKNIPCTVIELGPCVVTQVRTEEVDGYSALQLGFDDKAEKRA 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+K G F VSPKKK+ EFR + +G F G+ VD G++ GKGF
Sbjct: 61 NKAETGHFKKAGVSPKKKVVEFRDFEGG--YKLGDTIGVDLFVEGEFVDAIGISKGKGFQ 118
Query: 122 GAMKRHNFG-GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH F +ATHG R+ GS G P RVFK KMAGRMG ++VTV+NL+V+
Sbjct: 119 GVVKRHGFAGVGQATHGQHNRLRAPGSVGAASYPARVFKGMKMAGRMGTDKVTVQNLKVL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
V ++ L+++KGCVPG KN+++ +
Sbjct: 179 KVVPEKNLLVLKGCVPG-HKNAYVTI 203
>gi|254412263|ref|ZP_05026038.1| ribosomal protein L3 [Microcoleus chthonoplastes PCC 7420]
gi|196181229|gb|EDX76218.1| ribosomal protein L3 [Microcoleus chthonoplastes PCC 7420]
Length = 211
Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats.
Identities = 93/211 (44%), Positives = 128/211 (60%), Gaps = 3/211 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ KLGMT V++ EGR +PVTV+ C+V +T +GY AVQ+G E K K
Sbjct: 1 MSVGILGTKLGMTQVFDEEGRALPVTVVQAGPCRVTQIKTKQTDGYSAVQLGYHEVKEKA 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP +G + P + L E+R+ D+ +G V + F+ GQLVDV+G TIG+GF
Sbjct: 61 VNKPEKGHLAKSEAPPLRHLREYRLDNTDE-FQLGQVINAEIFSAGQLVDVSGNTIGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G KRHNF HG S +HR GSTG PGR F KKMAGR GG R T++ L+VV
Sbjct: 120 AGYQKRHNFKRGPMAHG-SKNHRLPGSTGAGTTPGRTFPGKKMAGRYGGKRQTIRKLQVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
VD +R L+++KG VPG + + + + K
Sbjct: 179 RVDTERNLLIIKGAVPGKP-GALLNIAPTNK 208
>gi|163840906|ref|YP_001625311.1| 50S ribosomal protein L3 [Renibacterium salmoninarum ATCC 33209]
gi|189029475|sp|A9WSV9|RL3_RENSM RecName: Full=50S ribosomal protein L3
gi|162954382|gb|ABY23897.1| LSU ribosomal protein L3P [Renibacterium salmoninarum ATCC 33209]
Length = 220
Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats.
Identities = 92/213 (43%), Positives = 127/213 (59%), Gaps = 2/213 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT V++ + +PVTV+ D+ V R K+GY AVQ+G G+ + V+
Sbjct: 8 KGILGTKLGMTQVWDENNKLVPVTVVQADSNVVTQLRDAAKDGYTAVQIGYGQIDPRKVT 67
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP+ G F V+P++ + E R D D +G S F GQ VDV G + GKGF+G
Sbjct: 68 KPLAGHFEKAGVTPRRHVVELR-TNDSDAYSLGQELSVEIFEAGQKVDVVGTSKGKGFAG 126
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F G+ A+HG +HR GS G P RVFK KMAGRMGG R T NL V ++
Sbjct: 127 VMKRHGFHGVGASHGAHKNHRKPGSIGGASTPSRVFKGLKMAGRMGGERHTTLNLTVHAI 186
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D ++ L+L+KG +PGA + +LVR + K+ V
Sbjct: 187 DAEKSLLLIKGAIPGA-RGRVVLVRTAVKTTVK 218
>gi|229829429|ref|ZP_04455498.1| hypothetical protein GCWU000342_01519 [Shuttleworthia satelles DSM
14600]
gi|229791860|gb|EEP27974.1| hypothetical protein GCWU000342_01519 [Shuttleworthia satelles DSM
14600]
Length = 227
Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats.
Identities = 89/228 (39%), Positives = 122/228 (53%), Gaps = 19/228 (8%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV-- 58
M ++A K+GMT ++N +G IPVTVL C V +TL+ +GY AVQVG + K
Sbjct: 1 MNKAILATKVGMTQIFNEDGVLIPVTVLQAGPCAVTQVKTLENDGYEAVQVGFVDKKDKI 60
Query: 59 --------------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
V+KP++G F+ V KK + EFR ++ +G F
Sbjct: 61 NTKDAAGRKEVHHRHGVNKPLKGHFAKAGVEGKKYVREFR-FENASEYKLGDEIKADIFA 119
Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
G VD T ++ GKGF GA+KR HG S HR GS G DP +VFK K M
Sbjct: 120 EGDKVDATAISKGKGFQGAIKRLGQHRGPMAHG-SKFHRHQGSNGAASDPSKVFKGKGMP 178
Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
G MG +VT++NLEVV VD + L+L+KG VPG K S + +++S K+
Sbjct: 179 GHMGSVKVTIQNLEVVKVDAENNLLLIKGAVPGP-KRSLVTIKESVKA 225
>gi|16804670|ref|NP_466155.1| 50S ribosomal protein L3 [Listeria monocytogenes EGD-e]
gi|46908804|ref|YP_015193.1| 50S ribosomal protein L3 [Listeria monocytogenes str. 4b F2365]
gi|47094372|ref|ZP_00232066.1| ribosomal protein L3 [Listeria monocytogenes str. 4b H7858]
gi|217966169|ref|YP_002351847.1| ribosomal protein L3 [Listeria monocytogenes HCC23]
gi|224499305|ref|ZP_03667654.1| 50S ribosomal protein L3 [Listeria monocytogenes Finland 1988]
gi|224503574|ref|ZP_03671881.1| 50S ribosomal protein L3 [Listeria monocytogenes FSL R2-561]
gi|226225177|ref|YP_002759284.1| ribosomal protein L3 [Listeria monocytogenes Clip81459]
gi|254825007|ref|ZP_05230008.1| ribosomal protein L3 [Listeria monocytogenes FSL J1-194]
gi|254829081|ref|ZP_05233768.1| ribosomal protein L3 [Listeria monocytogenes FSL N3-165]
gi|254830936|ref|ZP_05235591.1| 50S ribosomal protein L3 [Listeria monocytogenes 10403S]
gi|254854162|ref|ZP_05243510.1| ribosomal protein L3 [Listeria monocytogenes FSL R2-503]
gi|254899917|ref|ZP_05259841.1| 50S ribosomal protein L3 [Listeria monocytogenes J0161]
gi|254912877|ref|ZP_05262889.1| 50S ribosomal protein L3 [Listeria monocytogenes J2818]
gi|254931098|ref|ZP_05264457.1| ribosomal protein L3 [Listeria monocytogenes HPB2262]
gi|254937257|ref|ZP_05268954.1| ribosomal protein L3 [Listeria monocytogenes F6900]
gi|254991854|ref|ZP_05274044.1| 50S ribosomal protein L3 [Listeria monocytogenes FSL J2-064]
gi|255027144|ref|ZP_05299130.1| 50S ribosomal protein L3 [Listeria monocytogenes FSL J2-003]
gi|255029693|ref|ZP_05301644.1| 50S ribosomal protein L3 [Listeria monocytogenes LO28]
gi|255519640|ref|ZP_05386877.1| 50S ribosomal protein L3 [Listeria monocytogenes FSL J1-175]
gi|284800482|ref|YP_003412347.1| 50S ribosomal protein L3 [Listeria monocytogenes 08-5578]
gi|284993668|ref|YP_003415436.1| 50S ribosomal protein L3 [Listeria monocytogenes 08-5923]
gi|290891817|ref|ZP_06554814.1| ribosomal protein L3 [Listeria monocytogenes FSL J2-071]
gi|300763617|ref|ZP_07073615.1| ribosomal protein L3 [Listeria monocytogenes FSL N1-017]
gi|42559668|sp|Q8Y440|RL3_LISMO RecName: Full=50S ribosomal protein L3
gi|67461150|sp|Q71WE6|RL3_LISMF RecName: Full=50S ribosomal protein L3
gi|254803678|sp|B8DB08|RL3_LISMH RecName: Full=50S ribosomal protein L3
gi|259709728|sp|C1KZI0|RL3_LISMC RecName: Full=50S ribosomal protein L3
gi|16412120|emb|CAD00710.1| ribosomal protein L3 [Listeria monocytogenes EGD-e]
gi|46882077|gb|AAT05370.1| ribosomal protein L3 [Listeria monocytogenes serotype 4b str.
F2365]
gi|47017254|gb|EAL08093.1| ribosomal protein L3 [Listeria monocytogenes str. 4b H7858]
gi|217335439|gb|ACK41233.1| ribosomal protein L3 [Listeria monocytogenes HCC23]
gi|225877639|emb|CAS06353.1| ribosomal protein L3 [Listeria monocytogenes serotype 4b str. CLIP
80459]
gi|258601491|gb|EEW14816.1| ribosomal protein L3 [Listeria monocytogenes FSL N3-165]
gi|258607554|gb|EEW20162.1| ribosomal protein L3 [Listeria monocytogenes FSL R2-503]
gi|258609863|gb|EEW22471.1| ribosomal protein L3 [Listeria monocytogenes F6900]
gi|284056044|gb|ADB66985.1| 50S ribosomal protein L3 [Listeria monocytogenes 08-5578]
gi|284059135|gb|ADB70074.1| 50S ribosomal protein L3 [Listeria monocytogenes 08-5923]
gi|290558411|gb|EFD91928.1| ribosomal protein L3 [Listeria monocytogenes FSL J2-071]
gi|293582645|gb|EFF94677.1| ribosomal protein L3 [Listeria monocytogenes HPB2262]
gi|293590876|gb|EFF99210.1| 50S ribosomal protein L3 [Listeria monocytogenes J2818]
gi|293594248|gb|EFG02009.1| ribosomal protein L3 [Listeria monocytogenes FSL J1-194]
gi|300515894|gb|EFK42943.1| ribosomal protein L3 [Listeria monocytogenes FSL N1-017]
gi|307572221|emb|CAR85400.1| rplC [Listeria monocytogenes L99]
gi|328468116|gb|EGF39122.1| 50S ribosomal protein L3 [Listeria monocytogenes 1816]
gi|328469805|gb|EGF40722.1| 50S ribosomal protein L3 [Listeria monocytogenes 220]
Length = 209
Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats.
Identities = 84/213 (39%), Positives = 127/213 (59%), Gaps = 4/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY AVQ+G + +
Sbjct: 1 MTKGILGRKVGMTQVFTENGELIPVTVIEAAQNVVLQKKTVETDGYEAVQIGFEDKRAIL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EFR D+ +G+ F G ++D TG++ GKGF
Sbjct: 61 SNKPEQGHVAKANTTPKRFIREFRDVNLDE-YEIGAEVKVDVFAEGDIIDATGVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFKNK + GRMGG ++T++NLE+V
Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKLLPGRMGGEQITIQNLEIV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD ++ ++LVKG VPGAKK + + ++ + K+
Sbjct: 178 KVDVEKNVLLVKGNVPGAKK-ALVQIKTATKAK 209
>gi|325261494|ref|ZP_08128232.1| 50S ribosomal protein L3 [Clostridium sp. D5]
gi|324032948|gb|EGB94225.1| 50S ribosomal protein L3 [Clostridium sp. D5]
Length = 226
Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats.
Identities = 90/228 (39%), Positives = 125/228 (54%), Gaps = 19/228 (8%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++A K+GMT ++N +G PVTVL C V +T D +GY AVQVG + K K
Sbjct: 1 MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQVKTADNDGYSAVQVGFADKKEKI 60
Query: 61 VSKP----------------MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
V+K +G F VS K+ + EFR ++ + + F
Sbjct: 61 VTKDKSGKKEIAHRNGVTKAEKGHFDKAGVSGKRYVKEFR-FENAEEYTLAQEIKADIFE 119
Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
G +D T ++ GKGF GA+KRHN THG S HR GS G DP +VFK KKM
Sbjct: 120 AGDKIDATAVSKGKGFQGAIKRHNQSRGPMTHG-SKFHRHAGSNGSASDPSKVFKGKKMP 178
Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
G+MG ++TV+NLEVV VD + L+LVKG VPG KK + ++++ K+
Sbjct: 179 GQMGNKKITVQNLEVVRVDAENNLLLVKGSVPGPKK-CLVTLKETVKA 225
>gi|255659503|ref|ZP_05404912.1| 50S ribosomal protein L3 [Mitsuokella multacida DSM 20544]
gi|260848055|gb|EEX68062.1| 50S ribosomal protein L3 [Mitsuokella multacida DSM 20544]
Length = 214
Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats.
Identities = 100/217 (46%), Positives = 135/217 (62%), Gaps = 5/217 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M ++ RKLGMT ++ EG+ +PVTV+ N V+ ++T++ +GY AVQ+G GE K
Sbjct: 1 MSKAILGRKLGMTQIFTEEGKVVPVTVVESGNNVVIQNKTVESDGYNAVQLGFGEVKENK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP++G F VSP K + E R+ D VG F+ G+LVDVTG + GKGF
Sbjct: 61 VNKPLKGHFEKAGVSPVKFIREMRL-ADASEYKVGDTIGVDIFSAGELVDVTGTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTG--CRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
+G +KRHNF HG S SHR GSTG GRV K KK+ GRMGG RVTV+ L
Sbjct: 120 AGGIKRHNFARGPMGHG-SKSHREPGSTGAMISGPGGRVLKGKKLPGRMGGERVTVQRLT 178
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
VV VD R LIL+KG +PG KK S+++++++ K N
Sbjct: 179 VVRVDADRNLILIKGAIPGPKK-SFVVIKNTVKPGKN 214
>gi|292669860|ref|ZP_06603286.1| 50S ribosomal protein L3 [Selenomonas noxia ATCC 43541]
gi|292648657|gb|EFF66629.1| 50S ribosomal protein L3 [Selenomonas noxia ATCC 43541]
Length = 220
Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats.
Identities = 98/220 (44%), Positives = 130/220 (59%), Gaps = 5/220 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
+ ++ RKLGMT ++ EGR +PVTV+ N V+ ++T + +GY AVQ+G GE K KN
Sbjct: 4 LAKAILGRKLGMTQIFTEEGRVVPVTVVESGNNFVLQNKTDETDGYNAVQIGFGEVKEKN 63
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP++G F V + + E R+ VG F G LVDV G + GKGF
Sbjct: 64 VNKPLKGHFEKAGVKAVRFIREMRLSAP-SEYNVGDTIGVDIFAAGDLVDVVGTSKGKGF 122
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTG--CRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
+G +KRHNF HG S SHR GSTG GRV K KK+ GRMGG RVTV+ L
Sbjct: 123 AGGIKRHNFARGPMGHG-SKSHREPGSTGAMISGPGGRVLKGKKLPGRMGGERVTVQRLT 181
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
VV VD R LIL+KG +PG KK +++++D+ K A K
Sbjct: 182 VVRVDADRNLILIKGAIPGPKKG-FVVIKDTVKPAKAAKE 220
>gi|299541932|ref|ZP_07052255.1| 50S ribosomal protein L3 [Lysinibacillus fusiformis ZC1]
gi|298725670|gb|EFI66311.1| 50S ribosomal protein L3 [Lysinibacillus fusiformis ZC1]
Length = 209
Score = 207 bits (527), Expect = 9e-52, Method: Composition-based stats.
Identities = 91/213 (42%), Positives = 128/213 (60%), Gaps = 4/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY A+QVG + +VK
Sbjct: 1 MAKGILGRKIGMTQVFAENGDLIPVTVIEATPNVVLQKKTVETDGYEAIQVGFEDKRVKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EFR ++ VG F G ++DVTG+T GKGF
Sbjct: 61 SNKPEQGHVAKANTAPKRFIREFRNVNVEE-YEVGQEVKVEIFAEGDVIDVTGVTKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFK KK+ G+MGGN VT++NLE+V
Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKQKKLPGQMGGNVVTIQNLEIV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD R L+LVKG VPG+KK + + V+ + K+
Sbjct: 178 KVDTDRNLLLVKGNVPGSKK-ALVTVKTAIKAK 209
>gi|37519654|ref|NP_923031.1| 50S ribosomal protein L3 [Gloeobacter violaceus PCC 7421]
gi|42559594|sp|Q7NPH0|RL3_GLOVI RecName: Full=50S ribosomal protein L3
gi|35210645|dbj|BAC88026.1| 50S ribosomal protein L3 [Gloeobacter violaceus PCC 7421]
Length = 215
Score = 207 bits (527), Expect = 9e-52, Method: Composition-based stats.
Identities = 87/218 (39%), Positives = 121/218 (55%), Gaps = 3/218 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RKLGMT +++ EGR IPVTV+ C V ++ +GY AVQ+G G A+ K
Sbjct: 1 MSLGILGRKLGMTQIFDEEGRAIPVTVVEAGPCPVTQVKSEATDGYTAVQLGFGTAREKV 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+++P G + + D G + F GQLVDV G +IGKGF
Sbjct: 61 LTRPEVGHCKKAGLEAPVRHLREFRLPDSSQYTPGQQITVDLFAAGQLVDVVGTSIGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G KRH+FG HG S +HR+ GS G PGRVF K+M GRMG RVTV+ L VV
Sbjct: 121 AGGQKRHHFGRGPMAHG-SKNHRAPGSIGAGTTPGRVFPGKRMPGRMGNERVTVRKLTVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
V +R +IL++G +PG + +++ + KS KG
Sbjct: 180 RVIPERNVILIQGGLPGVE-GGLLMISPA-KSVGRAKG 215
>gi|116617329|ref|YP_817700.1| 50S ribosomal protein L3P [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|122272470|sp|Q03ZP5|RL3_LEUMM RecName: Full=50S ribosomal protein L3
gi|116096176|gb|ABJ61327.1| LSU ribosomal protein L3P [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
Length = 228
Score = 207 bits (527), Expect = 9e-52, Method: Composition-based stats.
Identities = 83/219 (37%), Positives = 118/219 (53%), Gaps = 8/219 (3%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ G I VT + V+ + + +GY A+Q+G + +
Sbjct: 1 MTKGILGRKVGMTQVFTESGELIAVTAVEATPNVVLQVKNAETDGYSAIQLGYQDKRTVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G S N +PK+ + E ++ D VG F G+ VDVTG+T G GF
Sbjct: 61 SNKPEQGHASKANTAPKRYVRE--IRNAGDEFNVGDEIKVDTFQAGEYVDVTGITKGHGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KR THG S HR GS G RVFK K + GRMG N+ T++N+ +V
Sbjct: 119 QGAIKRLGQSRGPMTHG-SRYHRRPGSMGAI--INRVFKGKLLPGRMGNNKRTMQNIAIV 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
VD + L+L+KG VPGA K S + V+ + K VN K
Sbjct: 176 HVDVENNLLLLKGNVPGANK-SLLTVKSTVK--VNAKHP 211
>gi|331091667|ref|ZP_08340501.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 2_1_46FAA]
gi|330403424|gb|EGG82983.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 2_1_46FAA]
Length = 226
Score = 207 bits (527), Expect = 9e-52, Method: Composition-based stats.
Identities = 90/228 (39%), Positives = 124/228 (54%), Gaps = 19/228 (8%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++A K+GMT ++N +G PVTVL C V +T++ +GY AVQVG + K K
Sbjct: 1 MKKAILATKVGMTQIFNEDGALTPVTVLQAGPCVVTQIKTVENDGYSAVQVGFVDKKDKI 60
Query: 61 VSKPMR----------------GFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
V+ G F VS K+ + EF+ + D+ + F
Sbjct: 61 VNVDKNGKKEIVHRHGVTKAEKGHFDKAGVSGKRFVREFKFENADE-YTLAQEIKADIFA 119
Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
G VD T ++ GKGF GA+KRHN THG S HR GS G DP +VFK KKM
Sbjct: 120 AGDKVDATAISKGKGFQGAIKRHNQHRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKMP 178
Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
G MG ++T++NLE+V VD + LILVKG VPG KK S + +++S K+
Sbjct: 179 GHMGSKKITIQNLEIVRVDAENNLILVKGSVPGPKK-SLVTIKESVKA 225
>gi|325269535|ref|ZP_08136151.1| 50S ribosomal protein L3 [Prevotella multiformis DSM 16608]
gi|324988154|gb|EGC20121.1| 50S ribosomal protein L3 [Prevotella multiformis DSM 16608]
Length = 204
Score = 207 bits (527), Expect = 9e-52, Method: Composition-based stats.
Identities = 84/206 (40%), Positives = 123/206 (59%), Gaps = 5/206 (2%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G GEAK K SK
Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKTVEKDGYKAVQLGFGEAKEKRTSK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P +G F +PKK L E K D+ +G + F + VD+ G + GKGF G
Sbjct: 63 PQQGHFKKAGTTPKKHLAE---FKFDEEYNLGDTITVELFNDAKFVDIVGTSKGKGFQGV 119
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G ++THG R GS G P +VFK +MAG+MGG+RVT +NL+V+ V
Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMAGQMGGDRVTTQNLQVLKV 179
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRD 208
+ L+LVKG V G S ++++
Sbjct: 180 IPEHNLLLVKGSVAGC-NGSTVIIKK 204
>gi|325068030|ref|ZP_08126703.1| 50S ribosomal protein L3 [Actinomyces oris K20]
Length = 222
Score = 207 bits (527), Expect = 9e-52, Method: Composition-based stats.
Identities = 88/209 (42%), Positives = 126/209 (60%), Gaps = 2/209 (0%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ KLGMT +++ G PVTV+ +D V RT++ +GY AVQ+ G+ + V+KP
Sbjct: 16 LLGTKLGMTQIWDENGVLRPVTVVRVDTNVVTQVRTIETDGYEAVQLAFGDIDARKVTKP 75
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+ G F+ V P++ + E R G + F VGQLVDVTG + GKGF+G M
Sbjct: 76 LAGHFAKAGVEPRRHVAEIRTS-LASEFTPGQELAADTFEVGQLVDVTGTSKGKGFAGVM 134
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KRH F G+ A+HG +HR GS G PGR+FK +MAGRMG R TV+NL++ +D
Sbjct: 135 KRHGFAGVGASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGHARRTVQNLKIRGIDV 194
Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+G++LV G +PG K S ++VR + K A
Sbjct: 195 DKGVLLVNGAIPGP-KGSVVVVRTAVKGA 222
>gi|282898357|ref|ZP_06306348.1| Ribosomal protein L3 [Raphidiopsis brookii D9]
gi|281196888|gb|EFA71793.1| Ribosomal protein L3 [Raphidiopsis brookii D9]
Length = 212
Score = 207 bits (527), Expect = 9e-52, Method: Composition-based stats.
Identities = 90/211 (42%), Positives = 126/211 (59%), Gaps = 3/211 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ KLGMT +++ G IPVTV+ C V +T +GY A+QVG GE K K
Sbjct: 1 MSVGILGTKLGMTQIFDEAGVSIPVTVIKAGPCTVTQVKTQPTDGYCAIQVGYGEVKPKA 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+++P G + + P + L E+R D +G F+VGQ+VDV G +IG+GF
Sbjct: 61 LNQPKLGHLAKSSAGPVRYLNEYRTDAAGD-YALGQEIKADIFSVGQIVDVIGTSIGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G KR+NFG +HG S +HR+ GS G PGRV+ K+MAGR+GG+RVTV+ L VV
Sbjct: 120 AGNQKRNNFGRGPMSHG-SKNHRAPGSIGAGTTPGRVYPGKRMAGRLGGSRVTVRKLTVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
VD +R LIL+KG +PG + V + K
Sbjct: 179 KVDAERNLILIKGAIPGKP-GGLVNVVPTTK 208
>gi|18401521|ref|NP_566579.1| RPL3P (RIBOSOMAL PROTEIN L3 PLASTID); structural constituent of
ribosome [Arabidopsis thaliana]
gi|42559534|sp|Q9LRN8|RK3B_ARATH RecName: Full=50S ribosomal protein L3-2, chloroplastic; Flags:
Precursor
gi|11994685|dbj|BAB02923.1| 50S ribosomal protein L3 [Arabidopsis thaliana]
Length = 324
Score = 207 bits (527), Expect = 9e-52, Method: Composition-based stats.
Identities = 101/209 (48%), Positives = 146/209 (69%), Gaps = 2/209 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+G++A K GMT +++ G+RIP+++L +D+ V +T++K G A+Q+G G+ K K++
Sbjct: 76 RTGIIAVKCGMTALWDKWGKRIPISILWVDDNIVSQVKTVEKEGIFALQIGCGQKKPKHL 135
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SK + G F + V K+KL EF V + D LLPVG+ +F GQ VDVTG+T GKGF
Sbjct: 136 SKAVVGHFRAQGVPLKRKLREFPVTE-DALLPVGTSLGVRHFVPGQYVDVTGITRGKGFQ 194
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRH F G+ A+HG S+SHRS GSTG R PG+VFK +KMAGRMG ++ TVKN+ V
Sbjct: 195 GCMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGADQRTVKNVWVYK 254
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
+D R L+ V+G VPGA+ N ++ ++D++
Sbjct: 255 IDPARNLMWVRGQVPGAEGN-FVFIKDAW 282
>gi|325964166|ref|YP_004242072.1| 50S ribosomal protein L3P [Arthrobacter phenanthrenivorans Sphe3]
gi|323470253|gb|ADX73938.1| LSU ribosomal protein L3P [Arthrobacter phenanthrenivorans Sphe3]
Length = 216
Score = 207 bits (527), Expect = 9e-52, Method: Composition-based stats.
Identities = 91/211 (43%), Positives = 125/211 (59%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT V++ + IPVTV+ D+ + R + +GY+AVQ+G G+ + V+
Sbjct: 8 KGLLGTKLGMTQVWDENNKLIPVTVVQADSNVITQLRNAEADGYVAVQIGYGQIDPRKVT 67
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP+ G F V+P++ + E R D +G S F GQ +DV G T GKGF+G
Sbjct: 68 KPLAGHFEKAGVTPRRHVVELR-TADAAEYELGQELSVEVFEAGQKIDVIGTTKGKGFAG 126
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F G+ A+HG +HR GS G P RVFK KMAGRMG R T NL V +V
Sbjct: 127 VMKRHGFHGVGASHGAHKNHRKPGSIGGASTPSRVFKGMKMAGRMGAVRHTTLNLTVHAV 186
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D ++ L+L+KG VPGA + +LVR + K A
Sbjct: 187 DVEKSLLLIKGAVPGA-RGQVVLVRTAVKGA 216
>gi|296392585|ref|YP_003657469.1| 50S ribosomal protein L3 [Segniliparus rotundus DSM 44985]
gi|296179732|gb|ADG96638.1| 50S ribosomal protein L3 [Segniliparus rotundus DSM 44985]
Length = 221
Score = 207 bits (527), Expect = 9e-52, Method: Composition-based stats.
Identities = 89/213 (41%), Positives = 123/213 (57%), Gaps = 2/213 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ KLGMT V++ R +PVTV+ V RT +++ Y A+Q+ G + V
Sbjct: 9 RVGLLGAKLGMTQVFDERNRVVPVTVIRTGVNVVTQVRTPERDKYSAIQLAFGHIDPRKV 68
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+ G F V+P++ L EFR+ D VG + F+ G LVDVTG + GKGF+
Sbjct: 69 NKPLAGQFEKAGVTPRRHLAEFRLD-DVSGYEVGQQIDATVFSAGDLVDVTGTSKGKGFA 127
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRH F G A+HG HR GS G PGRVFK +MAGRMG + T +NL V
Sbjct: 128 GTMKRHGFKGQGASHGAHKVHRRPGSIGACAFPGRVFKGTRMAGRMGNAKTTTQNLTVFR 187
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VD + G++L+KG VPG + + +R + K V
Sbjct: 188 VDPEAGVLLIKGAVPG-RDGGLVFIRSAVKKGV 219
>gi|210611125|ref|ZP_03288739.1| hypothetical protein CLONEX_00929 [Clostridium nexile DSM 1787]
gi|210152112|gb|EEA83119.1| hypothetical protein CLONEX_00929 [Clostridium nexile DSM 1787]
Length = 241
Score = 207 bits (527), Expect = 9e-52, Method: Composition-based stats.
Identities = 91/228 (39%), Positives = 125/228 (54%), Gaps = 19/228 (8%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++A K+GMT ++N +G PVTVL C V +T++ +GY AVQVG + K K
Sbjct: 16 MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQIKTVENDGYSAVQVGFVDKKDKI 75
Query: 61 VSKPMR----------------GFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
V+K G F VS K+ + EF+ ++ + + F
Sbjct: 76 VNKDKNGKKEIVHRHGTTKAEKGHFDKAGVSSKRFVREFK-FENAEEFTLAQEIKADIFA 134
Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
G VD T ++ GKGF GA+KRHN THG S HR GS G DP +VFK KKM
Sbjct: 135 AGDKVDATAISKGKGFQGAIKRHNQHRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKMP 193
Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
G MG R+T++NLE+V VD + LILVKG VPG KK S + +++S K+
Sbjct: 194 GHMGSKRITIQNLEIVRVDAENNLILVKGSVPGPKK-SLVTIKESVKA 240
>gi|139438580|ref|ZP_01772096.1| Hypothetical protein COLAER_01094 [Collinsella aerofaciens ATCC
25986]
gi|133776119|gb|EBA39939.1| Hypothetical protein COLAER_01094 [Collinsella aerofaciens ATCC
25986]
Length = 203
Score = 207 bits (527), Expect = 9e-52, Method: Composition-based stats.
Identities = 89/205 (43%), Positives = 116/205 (56%), Gaps = 3/205 (1%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ RK+GMT V++ + +PVTV+ C V +T +GY AVQ+G G+ K KNV+KP
Sbjct: 2 ILGRKIGMTQVWDEDDNVVPVTVIQAGPCAVSQVKTQATDGYDAVQIGFGDIKAKNVNKP 61
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
M G F+ V P + L E RV+ ++ V F + VDV G + GKGF G +
Sbjct: 62 MAGHFAKAGVEPVRFLREVRVENGEEHKVGEVVTVAD-FADVEKVDVIGTSKGKGFQGRI 120
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR THG S R GS G P RV K KMAG MG RVTVKNL VV +D
Sbjct: 121 KRWGQRRGPMTHG-SHFQRHPGSIGQCAYPARVLKGVKMAGHMGNERVTVKNLSVVRIDA 179
Query: 185 KRGLILVKGCVPGAKKNSWILVRDS 209
++ LILVKG VPGA KN + +R +
Sbjct: 180 EQNLILVKGAVPGA-KNGLVAIRMA 203
>gi|16801842|ref|NP_472110.1| 50S ribosomal protein L3 [Listeria innocua Clip11262]
gi|116873998|ref|YP_850779.1| 50S ribosomal protein L3 [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|42559673|sp|Q927K7|RL3_LISIN RecName: Full=50S ribosomal protein L3
gi|123466648|sp|A0ALW8|RL3_LISW6 RecName: Full=50S ribosomal protein L3
gi|16415317|emb|CAC98007.1| ribosomal protein L3 [Listeria innocua Clip11262]
gi|116742876|emb|CAK22000.1| ribosomal protein L3 [Listeria welshimeri serovar 6b str. SLCC5334]
Length = 209
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 84/213 (39%), Positives = 128/213 (60%), Gaps = 4/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY AVQ+G + + K
Sbjct: 1 MTKGILGRKVGMTQVFTENGELIPVTVIEAAQNVVLQKKTVETDGYEAVQIGFEDKRAKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + + +PK+ + EFR D+ +G+ F G ++D TG++ GKGF
Sbjct: 61 SNKPEQGHVAKADTTPKRFIREFRDVNLDE-YEIGAEVKVDVFAEGDIIDATGVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFKNK + GRMGG ++T++NLE+V
Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKLLPGRMGGEQITIQNLEIV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD ++ ++LVKG VPGAKK + + ++ + K+
Sbjct: 178 KVDVEKNVLLVKGNVPGAKK-ALVQIKTATKAK 209
>gi|269140570|ref|YP_003297271.1| 50S ribosomal protein L3 [Edwardsiella tarda EIB202]
gi|267986231|gb|ACY86060.1| 50S ribosomal protein L3 [Edwardsiella tarda EIB202]
gi|304560359|gb|ADM43023.1| LSU ribosomal protein L3p (L3e) [Edwardsiella tarda FL6-60]
Length = 199
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 90/201 (44%), Positives = 126/201 (62%), Gaps = 2/201 (0%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
MT ++ +G IPVTV+ ++ +V + LD +GY A+QV G K V+KP G F+
Sbjct: 1 MTRIFTEDGVSIPVTVIEIEANRVTQVKDLDNDGYRAIQVTTGSKKANRVTKPEAGHFAK 60
Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
V + L EFR+ + ++ +G S F + VDVTG++ GKGF+G +KR NF
Sbjct: 61 AGVEAGRVLREFRLSEGEE-FTIGQNISVEIFADVKKVDVTGISKGKGFAGTVKRWNFRT 119
Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
ATHG S+SHR+ GS G Q PG+VFK KKMAG++G RVTV++L+VV VD +R L+LV
Sbjct: 120 QDATHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVDAERNLLLV 179
Query: 192 KGCVPGAKKNSWILVRDSFKS 212
KG VPGA I V+ + K+
Sbjct: 180 KGAVPGATGGDLI-VKPAVKA 199
>gi|116490658|ref|YP_810202.1| 50S ribosomal protein L3P [Oenococcus oeni PSU-1]
gi|290890074|ref|ZP_06553157.1| hypothetical protein AWRIB429_0547 [Oenococcus oeni AWRIB429]
gi|122277158|sp|Q04G85|RL3_OENOB RecName: Full=50S ribosomal protein L3
gi|116091383|gb|ABJ56537.1| LSU ribosomal protein L3P [Oenococcus oeni PSU-1]
gi|290480265|gb|EFD88906.1| hypothetical protein AWRIB429_0547 [Oenococcus oeni AWRIB429]
Length = 247
Score = 207 bits (527), Expect = 1e-51, Method: Composition-based stats.
Identities = 78/220 (35%), Positives = 115/220 (52%), Gaps = 6/220 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ +G IPVTV+ V+ +T + +GY A+Q+G + +
Sbjct: 1 MTKGILGRKVGMTQVFTDKGELIPVTVIEALPNVVLQVKTPETDGYSALQLGVFDKRKIA 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + +PK+ + E R + D G F G+ VDV G+T G GF
Sbjct: 61 ANKPEQGHAKKASAAPKRYVREIRDAQGD--YKQGDKVKVDVFAAGEYVDVQGITKGHGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G++KR HG S HR GS G +VFK K + G+MGG+ T + L V
Sbjct: 119 QGSIKRLGQSRGPMAHG-SRYHRRPGSMGSI--INKVFKGKLLPGQMGGDLRTAQKLLVA 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
VD LIL+KG VPGA K S++ ++ + K K K+
Sbjct: 176 GVDPANNLILIKGNVPGANK-SFVTIKSTVKPFKASKIKL 214
>gi|171741273|ref|ZP_02917080.1| hypothetical protein BIFDEN_00348 [Bifidobacterium dentium ATCC
27678]
gi|283455366|ref|YP_003359930.1| 50S ribosomal protein L3 [Bifidobacterium dentium Bd1]
gi|306823568|ref|ZP_07456943.1| 50S ribosomal protein L3 [Bifidobacterium dentium ATCC 27679]
gi|309802910|ref|ZP_07697011.1| 50S ribosomal protein L3 [Bifidobacterium dentium JCVIHMP022]
gi|171276887|gb|EDT44548.1| hypothetical protein BIFDEN_00348 [Bifidobacterium dentium ATCC
27678]
gi|283102000|gb|ADB09106.1| rplC 50S ribosomal protein L3 [Bifidobacterium dentium Bd1]
gi|304553275|gb|EFM41187.1| 50S ribosomal protein L3 [Bifidobacterium dentium ATCC 27679]
gi|308220377|gb|EFO76688.1| 50S ribosomal protein L3 [Bifidobacterium dentium JCVIHMP022]
Length = 213
Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 81/212 (38%), Positives = 121/212 (57%), Gaps = 2/212 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+ ++ +KLGM+ V++ G +PVT++ + V ++ + +GY AVQ+G G+ V
Sbjct: 4 RTALLGKKLGMSQVWDENGFFVPVTLVDVSTNVVTAVKSEESDGYKAVQLGYGQVDPTKV 63
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+ G F+ V+P++ L E R ++ G + F G LVDVTG T GKGF+
Sbjct: 64 TKPLAGHFAKAGVTPRRHLAEVRTDNAEE-FEPGQELTAELFPEGTLVDVTGTTKGKGFA 122
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR F R THG + R GS G P R+ K K+MAGRMG T +NL +VS
Sbjct: 123 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTNTAQNLTIVS 182
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D + G++ +KG +PG K +LVR + K A
Sbjct: 183 SDVENGVLAIKGAIPGP-KGGIVLVRSAVKGA 213
>gi|297625782|ref|YP_003687545.1| 50S ribosomal protein L3 [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296921547|emb|CBL56101.1| 50S ribosomal protein L3 [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 224
Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 94/210 (44%), Positives = 124/210 (59%), Gaps = 2/210 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT +++ R +PVTV+ C V RT D +GY AVQ+G G + K+V+
Sbjct: 13 KGLLGTKLGMTQLWDENNRLVPVTVIQAGPCVVTQVRTPDTDGYSAVQLGYGAIRAKSVT 72
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP G F+ V+P+K L E R D +G P F +VDVTG+T GKG +G
Sbjct: 73 KPAAGQFARAKVTPRKYLAEIRTS-DASEYTLGQELGPDTFRTDDVVDVTGVTKGKGTAG 131
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KR F GL A+HGV HRS G G PG VFK +MAGRMG R TV+NL V V
Sbjct: 132 VVKRWGFKGLGASHGVHRKHRSPGGIGACATPGHVFKGLRMAGRMGNARKTVQNLAVAGV 191
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
D +GLILV+G VPG K + +++R + K
Sbjct: 192 DADKGLILVRGAVPG-NKGALVVLRTAAKK 220
>gi|187934203|ref|YP_001884473.1| 50S ribosomal protein L3 [Clostridium botulinum B str. Eklund 17B]
gi|188590013|ref|YP_001919672.1| 50S ribosomal protein L3 [Clostridium botulinum E3 str. Alaska E43]
gi|251780648|ref|ZP_04823568.1| 50S ribosomal protein L3 [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|226725151|sp|B2UYB0|RL3_CLOBA RecName: Full=50S ribosomal protein L3
gi|226725152|sp|B2TIH5|RL3_CLOBB RecName: Full=50S ribosomal protein L3
gi|187722356|gb|ACD23577.1| 50S ribosomal protein L3 [Clostridium botulinum B str. Eklund 17B]
gi|188500294|gb|ACD53430.1| 50S ribosomal protein L3 [Clostridium botulinum E3 str. Alaska E43]
gi|243084963|gb|EES50853.1| 50S ribosomal protein L3 [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 209
Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 88/212 (41%), Positives = 128/212 (60%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++ +K+GMT ++N G+ IPVTV+ C VV +T++K+GY A+QVG G+ + K
Sbjct: 1 MKKAIMGKKIGMTQIFNEAGKVIPVTVVEAGPCVVVQKKTVEKDGYEAIQVGFGDIREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP +G F V K+ L EFR+ +D VG F +G +DV+G++ GKGF
Sbjct: 61 VNKPAKGHFEKAGVVLKRTLKEFRL-EDVSQYEVGQEIKADVFEIGDKIDVSGVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR N THG S R+ GS G DP R FKNK+M G MG TV NLEVV
Sbjct: 120 QGVIKRWNQQRGPMTHG-SKFKRAPGSMGASSDPSRTFKNKRMPGHMGCVNTTVMNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V ++ L+L+KG +PG K + + +R++ K+
Sbjct: 179 KVIAEKNLLLIKGGIPGPNKGTVV-IRNAVKA 209
>gi|289423692|ref|ZP_06425491.1| 50S ribosomal protein L3 [Peptostreptococcus anaerobius 653-L]
gi|289155942|gb|EFD04608.1| 50S ribosomal protein L3 [Peptostreptococcus anaerobius 653-L]
Length = 209
Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 87/212 (41%), Positives = 125/212 (58%), Gaps = 4/212 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT V+ EG IPVTV+ V +TL+ +GY A+QVG +AK K +
Sbjct: 1 MKGILGKKIGMTQVFTEEGLVIPVTVVEAGPVAVTQIKTLENDGYEAIQVGYVDAKEKAL 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP +G + V K+ + + VG FT G+ +DVTG++ GKGF
Sbjct: 61 NKPQKGHLAKAGV--LKRHLKEFRVDTVEGYEVGQEIKADLFTAGEKIDVTGISKGKGFQ 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRH +HG S HR GS G PGRVFKNKK+AG MG ++T++NLEVV
Sbjct: 119 GPIKRHGQSRGPESHG-SRYHRRPGSMGACSYPGRVFKNKKLAGHMGSVKITIQNLEVVR 177
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD ++ L+L+KG +PGA K S + V+ + K +
Sbjct: 178 VDAEKNLLLIKGAIPGA-KGSVVTVKAAIKGS 208
>gi|326203896|ref|ZP_08193758.1| 50S ribosomal protein L3 [Clostridium papyrosolvens DSM 2782]
gi|325985994|gb|EGD46828.1| 50S ribosomal protein L3 [Clostridium papyrosolvens DSM 2782]
Length = 212
Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 84/214 (39%), Positives = 125/214 (58%), Gaps = 2/214 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++ +K+GMT +++ G IPVTV+ VV +T++ +GY A++VG + K
Sbjct: 1 MKKAMLGKKIGMTQIFDENGLVIPVTVVEAGPLTVVQKKTVETDGYNALKVGYQKVAEKK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+SKP G FS ++P K L EFR++ + + F G +DV+G++ GKGF
Sbjct: 61 LSKPALGQFSKTKLAPMKYLREFRLEDISSYEVGQEIKAEDMFQSGDKIDVSGLSKGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR+ G THG S+ HR GS +P RVFK KK+ G MG + TV+NLEVV
Sbjct: 121 QGTIKRYGQKGGPKTHG-SMYHRRVGSMSANTNPARVFKGKKLPGHMGMDNTTVQNLEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VD +R LILVKG +PG K ++++ + KS
Sbjct: 180 RVDAERNLILVKGALPGP-KGGLLVIKSTVKSGK 212
>gi|29374851|ref|NP_814004.1| 50S ribosomal protein L3 [Enterococcus faecalis V583]
gi|227519992|ref|ZP_03950041.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0104]
gi|227555853|ref|ZP_03985900.1| 50S ribosomal protein L3 [Enterococcus faecalis HH22]
gi|229546964|ref|ZP_04435689.1| 50S ribosomal protein L3 [Enterococcus faecalis TX1322]
gi|229550553|ref|ZP_04439278.1| 50S ribosomal protein L3 [Enterococcus faecalis ATCC 29200]
gi|255971709|ref|ZP_05422295.1| 50S ribosomal protein L3 [Enterococcus faecalis T1]
gi|255974709|ref|ZP_05425295.1| 50S ribosomal protein L3 [Enterococcus faecalis T2]
gi|256618380|ref|ZP_05475226.1| 50S ribosomal protein L3 [Enterococcus faecalis ATCC 4200]
gi|256762003|ref|ZP_05502583.1| 50S ribosomal protein L3 [Enterococcus faecalis T3]
gi|256855163|ref|ZP_05560524.1| ribosomal protein L3 [Enterococcus faecalis T8]
gi|256956862|ref|ZP_05561033.1| 50S ribosomal protein L3 [Enterococcus faecalis DS5]
gi|256960669|ref|ZP_05564840.1| 50S ribosomal protein L3 [Enterococcus faecalis Merz96]
gi|256964132|ref|ZP_05568303.1| 50S ribosomal protein L3 [Enterococcus faecalis HIP11704]
gi|257078532|ref|ZP_05572893.1| 50S ribosomal protein L3 [Enterococcus faecalis JH1]
gi|257081497|ref|ZP_05575858.1| 50S ribosomal protein L3 [Enterococcus faecalis E1Sol]
gi|257084145|ref|ZP_05578506.1| 50S ribosomal protein L3 [Enterococcus faecalis Fly1]
gi|257087972|ref|ZP_05582333.1| 50S ribosomal protein L3 [Enterococcus faecalis D6]
gi|257088649|ref|ZP_05583010.1| 50S ribosomal protein L3 [Enterococcus faecalis CH188]
gi|257417576|ref|ZP_05594570.1| 50S ribosomal protein L3 [Enterococcus faecalis AR01/DG]
gi|257418699|ref|ZP_05595693.1| 50S ribosomal protein L3 [Enterococcus faecalis T11]
gi|257421500|ref|ZP_05598490.1| 50S ribosomal protein L3 [Enterococcus faecalis X98]
gi|293382758|ref|ZP_06628683.1| 50S ribosomal protein L3 [Enterococcus faecalis R712]
gi|293388059|ref|ZP_06632587.1| 50S ribosomal protein L3 [Enterococcus faecalis S613]
gi|294781051|ref|ZP_06746402.1| 50S ribosomal protein L3 [Enterococcus faecalis PC1.1]
gi|300862213|ref|ZP_07108293.1| 50S ribosomal protein L3 [Enterococcus faecalis TUSoD Ef11]
gi|307269087|ref|ZP_07550448.1| 50S ribosomal protein L3 [Enterococcus faecalis TX4248]
gi|307274171|ref|ZP_07555379.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0855]
gi|307276396|ref|ZP_07557519.1| 50S ribosomal protein L3 [Enterococcus faecalis TX2134]
gi|307278606|ref|ZP_07559676.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0860]
gi|307287014|ref|ZP_07567089.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0109]
gi|307291645|ref|ZP_07571520.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0411]
gi|312901122|ref|ZP_07760410.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0470]
gi|312904684|ref|ZP_07763839.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0635]
gi|312908653|ref|ZP_07767595.1| 50S ribosomal protein L3 [Enterococcus faecalis DAPTO 512]
gi|312909199|ref|ZP_07768056.1| 50S ribosomal protein L3 [Enterococcus faecalis DAPTO 516]
gi|312952607|ref|ZP_07771471.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0102]
gi|42559615|sp|Q839G4|RL3_ENTFA RecName: Full=50S ribosomal protein L3
gi|29342309|gb|AAO80075.1| ribosomal protein L3 [Enterococcus faecalis V583]
gi|227072540|gb|EEI10503.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0104]
gi|227175020|gb|EEI55992.1| 50S ribosomal protein L3 [Enterococcus faecalis HH22]
gi|229304272|gb|EEN70268.1| 50S ribosomal protein L3 [Enterococcus faecalis ATCC 29200]
gi|229307892|gb|EEN73879.1| 50S ribosomal protein L3 [Enterococcus faecalis TX1322]
gi|255962727|gb|EET95203.1| 50S ribosomal protein L3 [Enterococcus faecalis T1]
gi|255967581|gb|EET98203.1| 50S ribosomal protein L3 [Enterococcus faecalis T2]
gi|256597907|gb|EEU17083.1| 50S ribosomal protein L3 [Enterococcus faecalis ATCC 4200]
gi|256683254|gb|EEU22949.1| 50S ribosomal protein L3 [Enterococcus faecalis T3]
gi|256709676|gb|EEU24723.1| ribosomal protein L3 [Enterococcus faecalis T8]
gi|256947358|gb|EEU63990.1| 50S ribosomal protein L3 [Enterococcus faecalis DS5]
gi|256951165|gb|EEU67797.1| 50S ribosomal protein L3 [Enterococcus faecalis Merz96]
gi|256954628|gb|EEU71260.1| 50S ribosomal protein L3 [Enterococcus faecalis HIP11704]
gi|256986562|gb|EEU73864.1| 50S ribosomal protein L3 [Enterococcus faecalis JH1]
gi|256989527|gb|EEU76829.1| 50S ribosomal protein L3 [Enterococcus faecalis E1Sol]
gi|256992175|gb|EEU79477.1| 50S ribosomal protein L3 [Enterococcus faecalis Fly1]
gi|256996002|gb|EEU83304.1| 50S ribosomal protein L3 [Enterococcus faecalis D6]
gi|256997461|gb|EEU83981.1| 50S ribosomal protein L3 [Enterococcus faecalis CH188]
gi|257159404|gb|EEU89364.1| 50S ribosomal protein L3 [Enterococcus faecalis ARO1/DG]
gi|257160527|gb|EEU90487.1| 50S ribosomal protein L3 [Enterococcus faecalis T11]
gi|257163324|gb|EEU93284.1| 50S ribosomal protein L3 [Enterococcus faecalis X98]
gi|291079918|gb|EFE17282.1| 50S ribosomal protein L3 [Enterococcus faecalis R712]
gi|291082510|gb|EFE19473.1| 50S ribosomal protein L3 [Enterococcus faecalis S613]
gi|294451854|gb|EFG20305.1| 50S ribosomal protein L3 [Enterococcus faecalis PC1.1]
gi|295112506|emb|CBL31143.1| LSU ribosomal protein L3P [Enterococcus sp. 7L76]
gi|300848738|gb|EFK76495.1| 50S ribosomal protein L3 [Enterococcus faecalis TUSoD Ef11]
gi|306497264|gb|EFM66806.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0411]
gi|306501960|gb|EFM71249.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0109]
gi|306504666|gb|EFM73866.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0860]
gi|306506876|gb|EFM76023.1| 50S ribosomal protein L3 [Enterococcus faecalis TX2134]
gi|306509133|gb|EFM78195.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0855]
gi|306514567|gb|EFM83121.1| 50S ribosomal protein L3 [Enterococcus faecalis TX4248]
gi|310625440|gb|EFQ08723.1| 50S ribosomal protein L3 [Enterococcus faecalis DAPTO 512]
gi|310629395|gb|EFQ12678.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0102]
gi|310632036|gb|EFQ15319.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0635]
gi|311290441|gb|EFQ68997.1| 50S ribosomal protein L3 [Enterococcus faecalis DAPTO 516]
gi|311291794|gb|EFQ70350.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0470]
gi|315026835|gb|EFT38767.1| 50S ribosomal protein L3 [Enterococcus faecalis TX2137]
gi|315028875|gb|EFT40807.1| 50S ribosomal protein L3 [Enterococcus faecalis TX4000]
gi|315031139|gb|EFT43071.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0017]
gi|315036015|gb|EFT47947.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0027]
gi|315145336|gb|EFT89352.1| 50S ribosomal protein L3 [Enterococcus faecalis TX2141]
gi|315147171|gb|EFT91187.1| 50S ribosomal protein L3 [Enterococcus faecalis TX4244]
gi|315151071|gb|EFT95087.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0012]
gi|315153609|gb|EFT97625.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0031]
gi|315156211|gb|EFU00228.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0043]
gi|315158644|gb|EFU02661.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0312]
gi|315160728|gb|EFU04745.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0645]
gi|315165901|gb|EFU09918.1| 50S ribosomal protein L3 [Enterococcus faecalis TX1302]
gi|315168100|gb|EFU12117.1| 50S ribosomal protein L3 [Enterococcus faecalis TX1341]
gi|315171460|gb|EFU15477.1| 50S ribosomal protein L3 [Enterococcus faecalis TX1342]
gi|315172694|gb|EFU16711.1| 50S ribosomal protein L3 [Enterococcus faecalis TX1346]
gi|315573514|gb|EFU85705.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0309B]
gi|315579326|gb|EFU91517.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0630]
gi|315582138|gb|EFU94329.1| 50S ribosomal protein L3 [Enterococcus faecalis TX0309A]
gi|323479422|gb|ADX78861.1| 50S ribosomal protein L3 [Enterococcus faecalis 62]
gi|327534004|gb|AEA92838.1| 50S ribosomal protein L3 [Enterococcus faecalis OG1RF]
gi|329577749|gb|EGG59175.1| 50S ribosomal protein L3 [Enterococcus faecalis TX1467]
Length = 209
Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 91/213 (42%), Positives = 131/213 (61%), Gaps = 4/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY A+QVG + +
Sbjct: 1 MTKGILGKKVGMTQIFTESGELIPVTVVEATPNVVLQVKTVETDGYEAIQVGYQDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EF+ + + VG F G +VDVTG T GKGF
Sbjct: 61 SNKPAKGHVAKANTAPKRFIKEFKNVELGE-YEVGKEIKVDVFQAGDVVDVTGTTKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH +HG S HR GS G P RVFKNK++AGRMGG+RVT++NLEVV
Sbjct: 120 QGAIKRHGQSRGPMSHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGDRVTIQNLEVV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD +R +IL+KG +PGAKK S I ++ + K+
Sbjct: 178 KVDVERNVILIKGNIPGAKK-SLITIKSAVKAK 209
>gi|289435898|ref|YP_003465770.1| hypothetical protein lse_2537 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289172142|emb|CBH28688.1| rplC [Listeria seeligeri serovar 1/2b str. SLCC3954]
Length = 209
Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 85/213 (39%), Positives = 128/213 (60%), Gaps = 4/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY AVQ+G + + K
Sbjct: 1 MTKGILGRKVGMTQVFTENGELIPVTVIEAAQNVVLQKKTVETDGYEAVQIGFEDKRAKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EFR D+ +G+ F G ++D TG++ GKGF
Sbjct: 61 SNKPEQGHVAKANTTPKRFIREFRDVNLDE-YEIGAEVKVDVFAEGDIIDATGVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFKNK + GRMGG ++T++NLE+V
Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKLLPGRMGGEQITIQNLEIV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD ++ ++LVKG VPGAKK + + ++ + K+
Sbjct: 178 KVDVEKNVLLVKGNVPGAKK-ALVQIKTATKAK 209
>gi|291298710|ref|YP_003509988.1| 50S ribosomal protein L3 [Stackebrandtia nassauensis DSM 44728]
gi|290567930|gb|ADD40895.1| ribosomal protein L3 [Stackebrandtia nassauensis DSM 44728]
Length = 220
Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 97/216 (44%), Positives = 127/216 (58%), Gaps = 2/216 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ KLGMT V++ R +PVTV+ C V RT D +GY AVQ+ G+ + V+K
Sbjct: 7 GILGTKLGMTQVWDENNRVVPVTVVQAGPCVVTQVRTPDTDGYSAVQLAFGQIDPRKVNK 66
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P+ G F+ V+P++ + E R D G + F G LVDVTG T GKG++G
Sbjct: 67 PLSGHFAKAEVAPRRHVVELRTT-DATEYSAGDEITVDRFETGGLVDVTGKTKGKGYAGV 125
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
MKRH FGGL A HGV HRS GS G PGRVFK +MAGRMGG R TV+NL++ +VD
Sbjct: 126 MKRHGFGGLGAGHGVQRKHRSPGSIGGCATPGRVFKGMRMAGRMGGVRHTVQNLKIHAVD 185
Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
L+L+KG +PG +LVR + K A K
Sbjct: 186 ADNNLLLIKGALPGP-TGGLVLVRGAVKVAAKGGAK 220
>gi|299820955|ref|ZP_07052844.1| 50S ribosomal protein L3 [Listeria grayi DSM 20601]
gi|299817976|gb|EFI85211.1| 50S ribosomal protein L3 [Listeria grayi DSM 20601]
Length = 209
Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 88/213 (41%), Positives = 124/213 (58%), Gaps = 4/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ G IPVTV+ V+ +T+D +GY AVQ+G + K
Sbjct: 1 MTKGILGRKVGMTQVFTENGELIPVTVIEAAENVVLQKKTVDTDGYEAVQIGFENKREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G N +PK+ + E R D+ +G+ F G +VD TG++ GKGF
Sbjct: 61 SNKPEKGHVVKANTTPKRFIREIRDVNLDE-YEIGAEVKVDVFAEGDIVDATGISKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFKNK + GRMGG +VT++NLE+V
Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKLLPGRMGGEQVTIQNLEIV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD + ++LVKG VPGAKK S + ++ + K+
Sbjct: 178 KVDVDKNILLVKGNVPGAKK-SLVQIKTAVKAK 209
>gi|237666933|ref|ZP_04526918.1| 50S ribosomal protein L3 [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|237658132|gb|EEP55687.1| 50S ribosomal protein L3 [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 209
Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 83/212 (39%), Positives = 125/212 (58%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++ +K+GMT +++ G+ +PVTV+ C VV +TL+ +GY A+QVG E + K
Sbjct: 1 MKKAIIGKKIGMTQIFDENGKVVPVTVVEAGPCVVVQKKTLENDGYEAIQVGFEEIREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G F+ VS ++ L EFR++ VG F G VDV+ ++ GKGF
Sbjct: 61 ANKPRKGQFAKAGVSIRRTLKEFRLEDITS-YEVGQEIKADVFEAGDKVDVSAVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR N THG S HR+ GS G DP R FKNK+M G MG TV NL+VV
Sbjct: 120 QGCIKRWNQQRGPMTHG-SKFHRAPGSMGASSDPSRTFKNKRMPGHMGSVNTTVLNLQVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V ++ LIL+KG +PG K + + ++++ ++
Sbjct: 179 KVIAEKNLILIKGGIPGPNKGTVV-IKNTVRA 209
>gi|242765739|ref|XP_002341035.1| 50S ribosomal protein L3 [Talaromyces stipitatus ATCC 10500]
gi|218724231|gb|EED23648.1| 50S ribosomal protein L3 [Talaromyces stipitatus ATCC 10500]
Length = 300
Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 100/217 (46%), Positives = 139/217 (64%), Gaps = 3/217 (1%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
+R+G++A K GMT +Y+ G+R P TVL LD CQV+ H+T+DK+GY AVQVGAG K +
Sbjct: 72 LRTGLLAIKKGMTGLYDPETGKRTPCTVLQLDRCQVISHKTMDKHGYFAVQVGAGFKKPE 131
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
++K + G FS V+PK+ + EFRV+ + LL +G + +F VGQ VD T GKG
Sbjct: 132 RLTKALVGHFSVNEVAPKRYVHEFRVKDGNGLLEIGHTLTADWFQVGQYVDARSNTKGKG 191
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ-DPGRVFKNKKMAGRMGGNRVTVKNLE 178
F+G MKRH F G +HGVS++HRS GS G Q RV+ KKMAG MG + T++NL+
Sbjct: 192 FAGVMKRHGFHGQDRSHGVSLTHRSLGSAGPSQGGGSRVYPGKKMAGNMGNVQNTLQNLK 251
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
V+ VD G+I+V G V G K + ++D+ K
Sbjct: 252 VLEVDPANGIIVVNGSVSGP-KGCLVKLQDALKKPWP 287
>gi|212716611|ref|ZP_03324739.1| hypothetical protein BIFCAT_01540 [Bifidobacterium catenulatum DSM
16992]
gi|225351045|ref|ZP_03742068.1| hypothetical protein BIFPSEUDO_02627 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|212660315|gb|EEB20890.1| hypothetical protein BIFCAT_01540 [Bifidobacterium catenulatum DSM
16992]
gi|225158501|gb|EEG71743.1| hypothetical protein BIFPSEUDO_02627 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 213
Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 82/212 (38%), Positives = 121/212 (57%), Gaps = 2/212 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+ ++ +KLGM+ V++ G +PVT++ + V ++ + +GY AVQ+G G+ V
Sbjct: 4 RTALLGKKLGMSQVWDENGFFVPVTLVDVSTNVVTAVKSEESDGYKAVQLGYGQVDPTKV 63
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+ G F+ V+P++ L E R ++ G + F G LVDVTG T GKGF+
Sbjct: 64 TKPLAGHFAKAGVTPRRHLAEVRTDNAEE-FEPGQELTAELFPEGTLVDVTGTTKGKGFA 122
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR F R THG + R GS G P R+ K K+MAGRMG T NL +VS
Sbjct: 123 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTNTTLNLTIVS 182
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D + G++ +KG +PG K S +LVR + K A
Sbjct: 183 SDVENGVLAIKGAIPGP-KGSIVLVRSAVKGA 213
>gi|119718125|ref|YP_925090.1| 50S ribosomal protein L3P [Nocardioides sp. JS614]
gi|166990937|sp|A1SNL8|RL3_NOCSJ RecName: Full=50S ribosomal protein L3
gi|119538786|gb|ABL83403.1| LSU ribosomal protein L3P [Nocardioides sp. JS614]
Length = 223
Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats.
Identities = 91/219 (41%), Positives = 126/219 (57%), Gaps = 2/219 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ KLGMT V++ R +PVTV+ V RT +GY A+QVG GE + V
Sbjct: 7 MKGLLGTKLGMTQVWDENNRVVPVTVIAAGTNVVTQVRTPATDGYNAIQVGYGEIDGRKV 66
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F +P++ L E R VG + F G+ +DVTG + GKGF+
Sbjct: 67 TKPQAGHFGKAGTTPRRHLVEIR-TALAADYTVGQELAVDTFAAGEEIDVTGTSKGKGFA 125
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRH F G+ A+HG +HR GS G PGRVFK +MAGRMG + VT +N+ V +
Sbjct: 126 GTMKRHGFAGVSASHGAHRNHRKPGSIGACATPGRVFKGVRMAGRMGTDTVTTQNVTVHA 185
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
VD +GLIL+KG VPG K +++R + KS++ +V
Sbjct: 186 VDTAKGLILLKGAVPGP-KGGLVVLRSAAKSSLTSGKEV 223
>gi|269219006|ref|ZP_06162860.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 848 str.
F0332]
gi|269212117|gb|EEZ78457.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 848 str.
F0332]
Length = 221
Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats.
Identities = 93/211 (44%), Positives = 130/211 (61%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
++ KLGMT +++ GR +P+TV+ + V RT + +GY AVQ+ +GE K KNV+
Sbjct: 13 KALLGTKLGMTQLWDEAGRVVPITVVRVGTNVVTQIRTPETDGYSAVQLASGELKTKNVT 72
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP++G F V+P++KL E R D +G + F GQ VDV G + GKGF+G
Sbjct: 73 KPLQGHFDKAGVAPRRKLAEIRTS-DAAEYELGQELTADLFEAGQKVDVIGTSKGKGFAG 131
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F G+ A+HG +HR GS G P RVF+ +MAGRMG +RVTV NL V +V
Sbjct: 132 VMKRHGFSGVSASHGAHRNHRKPGSIGACATPSRVFRGLRMAGRMGKDRVTVLNLPVHAV 191
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D ++G+IL+ G VPG K ++VR + K A
Sbjct: 192 DVEKGIILLAGAVPG-NKGGTVVVRTAVKGA 221
>gi|71065059|ref|YP_263786.1| 50S ribosomal protein L3 [Psychrobacter arcticus 273-4]
gi|109893542|sp|Q4FUF6|RL3_PSYA2 RecName: Full=50S ribosomal protein L3
gi|71038044|gb|AAZ18352.1| LSU ribosomal protein L3P [Psychrobacter arcticus 273-4]
Length = 212
Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats.
Identities = 95/213 (44%), Positives = 133/213 (62%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V +K GMT V+ G IPVTV+ + ++ + D +GY A+QV G +
Sbjct: 1 MAIGLVGKKCGMTRVFTEAGASIPVTVVEISANRITQVKNTDVDGYQAIQVTTGTRRDSR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+ +G F+ V+ + ++EFR D + +G F GQ+VDVTG + GKG
Sbjct: 61 VTAAQKGHFAKAGVAAGRGVWEFRANDSDLEGREIGGEILADLFEQGQMVDVTGSSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KRHNF ATHG S+SHR+HGSTG Q PG+VFK KKMAG+MG RVTV+ LEV
Sbjct: 121 FQGPVKRHNFSMQDATHGNSVSHRAHGSTGQNQSPGKVFKGKKMAGQMGNKRVTVQGLEV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+SVD ++GL+++KG +PGA ++VR S K+
Sbjct: 181 ISVDAEKGLLVIKGAIPGA-TGGDVIVRPSVKA 212
>gi|328543358|ref|YP_004303467.1| 50S ribosomal protein L3 [Polymorphum gilvum SL003B-26A1]
gi|326413103|gb|ADZ70166.1| 50S ribosomal protein L3 [Polymorphum gilvum SL003B-26A1]
Length = 227
Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats.
Identities = 128/210 (60%), Positives = 155/210 (73%), Gaps = 2/210 (0%)
Query: 11 GMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFS 70
GMT +YN G +PVTVL L+ CQVV HRT +KNGY A+Q+GAG AKVKN K MRG F+
Sbjct: 2 GMTRIYNDAGEHVPVTVLRLEKCQVVAHRTEEKNGYTALQLGAGAAKVKNTPKAMRGHFA 61
Query: 71 SVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130
V PK+ + EFRV + D+L+ VG+ + ++ GQ VDVTG +IGKGF+G MKRHNFG
Sbjct: 62 VAKVEPKRTIAEFRVSQ-DNLIDVGAEITADHYVAGQYVDVTGTSIGKGFAGVMKRHNFG 120
Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190
G RATHG S+SHRSHGSTG RQDPG+VFK KKMAG MG RVT +NL+VV D +RGLI+
Sbjct: 121 GGRATHGNSVSHRSHGSTGQRQDPGKVFKGKKMAGHMGDVRVTTQNLKVVRTDVERGLIM 180
Query: 191 VKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
V+G VPGA K WILVRD+ K A+ V
Sbjct: 181 VEGSVPGA-KGGWILVRDAVKKALPEGVPV 209
>gi|15896383|ref|NP_349732.1| 50S ribosomal protein L3 [Clostridium acetobutylicum ATCC 824]
gi|42559679|sp|Q97EH8|RL3_CLOAB RecName: Full=50S ribosomal protein L3
gi|15026199|gb|AAK81072.1|AE007808_25 Ribosomal protein L3 [Clostridium acetobutylicum ATCC 824]
Length = 209
Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats.
Identities = 89/212 (41%), Positives = 132/212 (62%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ G++ +KLGMT ++N EG+ +PVTV+ C V+ +T +K GY A+QVG G + K
Sbjct: 1 MKKGILGKKLGMTQIFNEEGKVVPVTVIEAGPCVVIQKKTSEKEGYDAIQVGFGTIREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP++G F+ NV K+ + EFR+ +D VG+ F G+ VDV+G++ GKGF
Sbjct: 61 VNKPLKGHFAKGNVELKRFVKEFRL-EDTSSYEVGAEIKADIFAAGEKVDVSGVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G ++R +HG S HR+ GS G DP R FK+KKM G MG TV N+EV
Sbjct: 120 QGTIRRWGAHRGPMSHG-SKFHRAVGSMGGSSDPSRTFKSKKMPGHMGHVNTTVLNVEVA 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V ++ LIL+KG VPG K S++++++S K+
Sbjct: 179 KVIPEKNLILIKGGVPGPNK-SFVVIKNSVKA 209
>gi|331268413|ref|YP_004394905.1| 50S ribosomal protein L3 [Clostridium botulinum BKT015925]
gi|329124963|gb|AEB74908.1| ribosomal protein L3 [Clostridium botulinum BKT015925]
Length = 209
Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats.
Identities = 87/212 (41%), Positives = 130/212 (61%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++ RK+GMT +++ G+ IPVTV+ C V+ +T +K+GY A+QVG + + K
Sbjct: 1 MKKAIIGRKIGMTQIFDENGKVIPVTVVEAGPCAVLQKKTEEKDGYNAIQVGFEDIREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G F+ VS K+ + EFR++ D+ VG+ F G VDVTG++ GKGF
Sbjct: 61 ANKPKKGHFAKAGVSLKRIVREFRLENIDE-YEVGNEIKADVFEAGDKVDVTGVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR NF HG S HR+ GS G DP R FKNKKM G MG + TV NLEVV
Sbjct: 120 QGTIKRWNFHRGPMAHG-SKYHRAVGSMGAASDPSRTFKNKKMPGHMGHKKSTVLNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V + ++L+KG +PG K +++++++ K+
Sbjct: 179 KVMADKNVVLIKGGIPGPNKG-YVVIKNTVKA 209
>gi|322418364|ref|YP_004197587.1| 50S ribosomal protein L3 [Geobacter sp. M18]
gi|320124751|gb|ADW12311.1| 50S ribosomal protein L3 [Geobacter sp. M18]
Length = 211
Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats.
Identities = 88/214 (41%), Positives = 124/214 (57%), Gaps = 3/214 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGMT ++ +GRRI VTV+ C V+ ++++K+GY A+QVG +
Sbjct: 1 MNKGLIGKKLGMTQIFAEDGRRIAVTVVEAGPCVVLQKKSVEKDGYTAIQVGYVQKDAAR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+ G S E R+ D +G V F G LVDVTG +IGKGF
Sbjct: 61 ANAAQVGHCKSAGAGVFTHYRELRMDNTDA-YNLGDVIEAGVFAEGDLVDVTGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR F G R++HG S HR+ GS GC P RVFKNKKM G++G +VTV+ L+VV
Sbjct: 120 AGVIKRWGFKGGRSSHG-SRFHRAPGSIGCSATPSRVFKNKKMPGQLGNEKVTVQRLKVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VD LIL+ G +PG+ N +L++DS K+
Sbjct: 179 RVDAADNLILLGGAIPGSA-NGVVLIKDSVKAKK 211
>gi|254495711|ref|ZP_05108627.1| 50S ribosomal protein L3 [Legionella drancourtii LLAP12]
gi|254355058|gb|EET13677.1| 50S ribosomal protein L3 [Legionella drancourtii LLAP12]
Length = 216
Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats.
Identities = 90/212 (42%), Positives = 124/212 (58%), Gaps = 1/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ EG +PV+V+ + +V +T++ +GY A+Q+ G K
Sbjct: 1 MMIGLLGRKIGMTRVFTAEGVSVPVSVVEVHPNRVSQIKTMEADGYAAIQLTGGTKKASK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+K G F+ + EF V +D + F GQ VDV+G T GKGF
Sbjct: 61 VNKAQAGHFAKAEIEAGDMQVEFWVDSEDAFKAGQELSVADVFAAGQFVDVSGTTKGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KRHNF ATHG S SHR GS G Q PGRVFK KKMAG MG R TV++LE+V
Sbjct: 121 AGTVKRHNFRTQDATHGNSRSHRVPGSIGQNQTPGRVFKGKKMAGHMGNVRCTVQSLELV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG +PGA S + ++ + K
Sbjct: 181 RVDAERNLLLIKGAIPGAP-GSRVEIKPAAKK 211
>gi|323490623|ref|ZP_08095828.1| 50S ribosomal protein L3 [Planococcus donghaensis MPA1U2]
gi|323395715|gb|EGA88556.1| 50S ribosomal protein L3 [Planococcus donghaensis MPA1U2]
Length = 209
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 87/213 (40%), Positives = 124/213 (58%), Gaps = 4/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY A+Q+G + + K
Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEASPNVVLQKKTVEVDGYEAIQLGFEDKRDKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + E R D +G F G +VDVTG T GKGF
Sbjct: 61 SNKPSKGHVAKANTAPKRFIRELRNVNLAD-YEIGQEVKVDVFAEGDVVDVTGTTKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH THG S HR GS G P RVFK KK+ G+MGG +T++NL +V
Sbjct: 120 QGVIKRHGQSRGPMTHG-SRYHRRPGSMGPVA-PNRVFKQKKLPGQMGGTTITIQNLSIV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD +R L+LVKG VPG++K + I V+ + K+
Sbjct: 178 KVDLERNLLLVKGNVPGSRK-ALIRVKSATKAK 209
>gi|261338279|ref|ZP_05966163.1| 50S ribosomal protein L3 [Bifidobacterium gallicum DSM 20093]
gi|270276934|gb|EFA22788.1| 50S ribosomal protein L3 [Bifidobacterium gallicum DSM 20093]
Length = 216
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 85/212 (40%), Positives = 122/212 (57%), Gaps = 2/212 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+ ++ +KLGM+ V++ G IPVT++ + V +T + +GY AVQ+G G+A +
Sbjct: 7 RTALLGKKLGMSQVWDENGFFIPVTLIDVSTNVVTAVKTEETDGYNAVQLGYGQADPTKI 66
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KPM G F+ V+P++ L E R + + G + F G VDVTG T GKGF+
Sbjct: 67 TKPMAGHFAKAGVTPRRHLAEVRTENVAE-FEPGQELTAELFPEGVQVDVTGTTKGKGFA 125
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR F R THG + R GS G P R+ K K+MAGRMG + TV NL ++S
Sbjct: 126 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHDTNTVLNLTIMS 185
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D + G+I VKG +PG K +LVR + K A
Sbjct: 186 SDVENGIIAVKGAIPGP-KGGIVLVRSAVKGA 216
>gi|134103264|ref|YP_001108925.1| 50S ribosomal protein L3 [Saccharopolyspora erythraea NRRL 2338]
gi|291007943|ref|ZP_06565916.1| 50S ribosomal protein L3 [Saccharopolyspora erythraea NRRL 2338]
gi|166234589|sp|A4FPM5|RL3_SACEN RecName: Full=50S ribosomal protein L3
gi|133915887|emb|CAM06000.1| 50S ribosomal protein L3 [Saccharopolyspora erythraea NRRL 2338]
Length = 216
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 88/210 (41%), Positives = 122/210 (58%), Gaps = 2/210 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT V++ + R +PVTV+ V RT +K+GY AVQ+ G + V+
Sbjct: 7 KGILGTKLGMTQVFDDQNRVVPVTVVQAGPNVVTQIRTPEKDGYSAVQLAFGAIDPRKVN 66
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP G F+ V+P++ + E R D VG + F G +VDV G + GKGF+G
Sbjct: 67 KPRTGHFTKAGVTPRRHVVELR-TADAGEYEVGQEVTAEVFEAGTVVDVVGTSKGKGFAG 125
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F G A+HG HR GS G PGRVFK +M+GRMG +RVT +NL+V V
Sbjct: 126 TMKRHGFRGQGASHGTQAVHRKPGSIGGCATPGRVFKGMRMSGRMGSDRVTTQNLKVHRV 185
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+ + GL+L+KG +PG K +LV+ K
Sbjct: 186 EGESGLLLIKGAIPGP-KGGLVLVKSPAKG 214
>gi|238921442|ref|YP_002934957.1| hypothetical protein NT01EI_3594 [Edwardsiella ictaluri 93-146]
gi|238871011|gb|ACR70722.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
Length = 199
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 90/201 (44%), Positives = 125/201 (62%), Gaps = 2/201 (0%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
MT ++ +G IPVTV+ ++ +V + LD +GY A+QV G K V+KP G F+
Sbjct: 1 MTRIFTEDGVSIPVTVIEIEANRVTQVKDLDNDGYRAIQVTTGSKKANRVTKPEAGHFAK 60
Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
V + L EFR+ + ++ +G S F + VDVTG++ GKGF+G +KR NF
Sbjct: 61 AGVEAGRVLREFRLSEGEE-FTIGQNISVEIFADVKKVDVTGISKGKGFAGTVKRWNFRT 119
Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
ATHG S+SHR GS G Q PG+VFK KKMAG++G RVTV++L+VV VD +R L+LV
Sbjct: 120 QDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQLGNERVTVQSLDVVRVDAERNLLLV 179
Query: 192 KGCVPGAKKNSWILVRDSFKS 212
KG VPGA I V+ + K+
Sbjct: 180 KGAVPGATGGDLI-VKPAVKA 199
>gi|318042564|ref|ZP_07974520.1| 50S ribosomal protein L3 [Synechococcus sp. CB0101]
Length = 215
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 86/216 (39%), Positives = 126/216 (58%), Gaps = 3/216 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGM+ ++ EGR IPVTV+ C++ +T +GY AVQ+G G+ + K
Sbjct: 1 MSIGILGKKLGMSQFFDDEGRSIPVTVIEAGPCRITQLKTDSTDGYTAVQLGFGDIREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP +G + P + L E+RV D L G + + F GQ VDV+G TIG+GF
Sbjct: 61 VNKPAKGHLAKSGSEPLRHLKEYRVDTVDGLELGG-AITVAAFEAGQKVDVSGDTIGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G KRH F THG S +HR GSTG PGRV+ K+MAGR GG ++T + L ++
Sbjct: 120 AGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRVYPGKRMAGRYGGKQITTRGLVIL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
VD +R L++VKG VPG + + + + +
Sbjct: 179 KVDAERNLLVVKGSVPGKP-GALLNILPAKRVGAKA 213
>gi|162446957|ref|YP_001620089.1| 50S ribosomal protein L3 [Acholeplasma laidlawii PG-8A]
gi|189042828|sp|A9NED3|RL3_ACHLI RecName: Full=50S ribosomal protein L3
gi|161985064|gb|ABX80713.1| large subunit ribosomal protein L3 [Acholeplasma laidlawii PG-8A]
Length = 212
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 83/215 (38%), Positives = 123/215 (57%), Gaps = 8/215 (3%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT +++ G IPVTV+ ++ V+ +T++ +GY A QVG + K
Sbjct: 1 MAKGILGRKIGMTQIFDENGVLIPVTVIDVEGNVVLQQKTVEVDGYQATQVGFESKREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL---LPVGSVFSPSYFTVGQLVDVTGMTIG 117
+KP G N +PK+ + E R ++ L VG+ FT G+ VDVTG + G
Sbjct: 61 SNKPELGHVKKANTAPKRFVKEIRFDALNNELLALEVGTEIKADLFTAGEDVDVTGTSKG 120
Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
KGF G +KRHN THG S HR GS G + K K + G+MG +VTV+NL
Sbjct: 121 KGFQGNIKRHNQSRGPMTHG-SRYHRGVGSLGAIKGN---MKGKNLPGQMGNEQVTVQNL 176
Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
++V+VD + L+LV G VPG +K +++VR + K
Sbjct: 177 KIVAVDTENDLLLVSGSVPGPRKG-YVVVRSAIKK 210
>gi|317968817|ref|ZP_07970207.1| 50S ribosomal protein L3 [Synechococcus sp. CB0205]
Length = 215
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 86/216 (39%), Positives = 125/216 (57%), Gaps = 3/216 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGM+ ++ EGR IPVTV+ C++ +T +GY AVQ+G G+ + K
Sbjct: 1 MSIGILGKKLGMSQFFDDEGRAIPVTVIEAGPCRITQLKTDSTDGYTAVQLGFGDIREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VSKP +G + + L E+RV D L G + + F GQ VDV+G TIG+GF
Sbjct: 61 VSKPAKGHLAKSGDELLRHLKEYRVDSVDGLELGGD-VTVAAFEAGQKVDVSGDTIGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G KRH F THG S +HR GSTG PGRV+ K+MAGR GG ++T + L ++
Sbjct: 120 AGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRVYPGKRMAGRYGGKQITTRGLTIL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
VD +R L++VKG VPG + + + + +
Sbjct: 179 KVDAERNLLVVKGSVPGKP-GALLNILPAKRVGAKA 213
>gi|312200020|ref|YP_004020081.1| 50S ribosomal protein L3 [Frankia sp. EuI1c]
gi|311231356|gb|ADP84211.1| 50S ribosomal protein L3 [Frankia sp. EuI1c]
Length = 232
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 96/213 (45%), Positives = 124/213 (58%), Gaps = 2/213 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ KLGMT V++ + R +P+TV+ V +T D +GY AVQ+G GE + +K
Sbjct: 8 GLLGTKLGMTQVWDAQNRVVPITVIQAGPNVVTQVKTPDNDGYAAVQLGYGEIDPRKTNK 67
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P RG F++ V+P++ L E R D G S F G +VDVTG + GKGF+G
Sbjct: 68 PTRGHFAAAGVTPRRHLAELR-TADAGNYSAGLQLDGSVFDAGTVVDVTGTSKGKGFAGV 126
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
MKRH F GL A HGV HRS GS G PGRVFK +MAGRMG RVTV L V +VD
Sbjct: 127 MKRHGFKGLGAGHGVERKHRSPGSVGGCATPGRVFKGLRMAGRMGNVRVTVAGLTVHAVD 186
Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
+RGL+L+KG VPG + VR + K
Sbjct: 187 AERGLLLIKGAVPGVD-GGLVFVRSAAKRPAPA 218
>gi|310821093|ref|YP_003953451.1| 50S ribosomal protein L3 [Stigmatella aurantiaca DW4/3-1]
gi|309394165|gb|ADO71624.1| 50S ribosomal protein L3 [Stigmatella aurantiaca DW4/3-1]
Length = 223
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 97/222 (43%), Positives = 134/222 (60%), Gaps = 3/222 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT V+N EG +PVTV+ + CQVV RT +K+ Y AV +G GE + K +
Sbjct: 1 MKGLIGKKIGMTQVFNDEGNLVPVTVVDVSTCQVVGKRTPEKDQYSAVTLGFGEIREKVL 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++ RGFF + + ++ L EFRV +D VG FT GQLVDVTG T G+GF
Sbjct: 61 NQAQRGFFKKNSAALRRHLKEFRVTPEDAAQFNVGDAVKADLFTKGQLVDVTGTTKGRGF 120
Query: 121 SGAMKRHNFG-GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
SG M+R +F THG R G+ G R+ PGR + NKKM G G +VT +NL V
Sbjct: 121 SGVMRRWSFKGSQTKTHGTHEYQRHPGAIGQRKTPGRTYPNKKMPGHYGVEQVTTQNLTV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
V VD ++GL+L+KG VPG ++ + VR S K A+ + K S
Sbjct: 181 VDVDTEKGLLLIKGAVPG-HNDAIVYVRPSVKVALRAQHKAS 221
>gi|332042720|gb|EGI78920.1| 50S ribosomal protein L3 [Lacinutrix algicola 5H-3-7-4]
Length = 205
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 84/208 (40%), Positives = 127/208 (61%), Gaps = 4/208 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT +++ G+ IP TV+ C V RT + +GY AVQ+G +A K+
Sbjct: 1 MSGLIGKKIGMTSIFDENGKNIPCTVIEAGPCIVTQVRTEEVDGYKAVQLGFDDATEKSA 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+K G S K+K+ EF+ +++ +G + +F G+ VDV+G + GKGF
Sbjct: 61 TKADLGHAKKAGTSVKRKIAEFQGFEEE--YKLGDAITVEHFAEGEFVDVSGTSKGKGFQ 118
Query: 122 GAMKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH F G +ATHG R+ GS G P RVFK KMAGRMGG+ + V+NL V+
Sbjct: 119 GVVKRHGFGGVGQATHGQHNRLRAPGSIGAASYPARVFKGMKMAGRMGGDTIKVQNLRVL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
V ++ L++VKGCVPG KN+++++R
Sbjct: 179 KVVTEKNLLVVKGCVPG-HKNAYVIIRK 205
>gi|213693088|ref|YP_002323674.1| ribosomal protein L3 [Bifidobacterium longum subsp. infantis ATCC
15697]
gi|254803655|sp|B7GNE0|RL3_BIFLI RecName: Full=50S ribosomal protein L3
gi|213524549|gb|ACJ53296.1| ribosomal protein L3 [Bifidobacterium longum subsp. infantis ATCC
15697]
gi|320459266|dbj|BAJ69887.1| 50S ribosomal protein L3 [Bifidobacterium longum subsp. infantis
ATCC 15697]
Length = 213
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 83/212 (39%), Positives = 118/212 (55%), Gaps = 2/212 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R ++ +KLGM+ V++ G +PVT++ + V +T + +GY AVQ+G G V
Sbjct: 4 RKALLGKKLGMSQVWDENGFFVPVTLVDVSTNVVTAVKTEESDGYKAVQLGYGAIDPTKV 63
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+ G F+ V+P++ L E R D D G + F G VDVTG T GKGF+
Sbjct: 64 TKPLAGHFAKAGVTPRRHLVEVRTD-DVDQFEAGQELAADLFEEGAEVDVTGTTKGKGFA 122
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR F R THG + R GS G P R+ K K+MAGRMG T +NL +VS
Sbjct: 123 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTATTQNLIIVS 182
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D + G++ +KG +PG K +LVR + K A
Sbjct: 183 ADVENGILAIKGAIPGP-KGGIVLVRSAVKGA 213
>gi|312870514|ref|ZP_07730633.1| 50S ribosomal protein L3 [Lactobacillus oris PB013-T2-3]
gi|311093976|gb|EFQ52301.1| 50S ribosomal protein L3 [Lactobacillus oris PB013-T2-3]
Length = 220
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 78/215 (36%), Positives = 121/215 (56%), Gaps = 4/215 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT V+ G +PVTV+ + V+ +T++ +GY AVQ+G + +
Sbjct: 1 MAKGILGKKVGMTQVFTDNGELVPVTVIDVTPNVVMQIKTVENDGYNAVQLGFDDKREIL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + E R + D + VG F G+ VDVTG+T G G+
Sbjct: 61 SNKPEQGHAAKANTTPKRFIGEIRDAELGDDIKVGDEVKADVFAEGETVDVTGVTKGHGY 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G + + N HG S HR GS G RVFK K+ GRMG VT+++L+VV
Sbjct: 121 QGNIHKDNQSRGPMAHG-SRYHRRPGSLGAI--INRVFKGMKLPGRMGNKTVTMQHLQVV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
VD ++L+KG VPGA K S++ +++S K+
Sbjct: 178 KVDLDNNVLLIKGNVPGANK-SYVTIKNSVKANTK 211
>gi|226309808|ref|YP_002769702.1| 50S ribosomal protein L3 [Brevibacillus brevis NBRC 100599]
gi|254803658|sp|C0ZII0|RL3_BREBN RecName: Full=50S ribosomal protein L3
gi|226092756|dbj|BAH41198.1| 50S ribosomal protein L3 [Brevibacillus brevis NBRC 100599]
Length = 209
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 86/212 (40%), Positives = 124/212 (58%), Gaps = 4/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGMT V+ G VTV+ + + V+ + ++ +GY A+Q+G + K +
Sbjct: 1 MTKGILGKKLGMTQVFGPNGTATAVTVIEVGSNVVLQKKDVETDGYEAIQIGFEDKKEQR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + E R D VG F G++VDV G++ GKGF
Sbjct: 61 ANKPEKGHAAKANTAPKRFIREIRGVNLAD-YEVGQELKADIFAEGEMVDVAGVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRHN HG S HR GS G P RVFK + + G+MGG+ VT++NLEV+
Sbjct: 120 QGAIKRHNQSRGPMAHG-SRYHRGPGSMGAVA-PNRVFKGQTLPGQMGGDNVTIQNLEVI 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+LVKG VPG KNS +LV + K
Sbjct: 178 KVDTERNLVLVKGSVPGP-KNSCVLVSTAVKK 208
>gi|219681870|ref|YP_002468256.1| 50S ribosomal protein L3 [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|219682425|ref|YP_002468809.1| 50S ribosomal protein L3 [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|257471575|ref|ZP_05635574.1| 50S ribosomal protein L3 [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|254803660|sp|B8D9U7|RL3_BUCA5 RecName: Full=50S ribosomal protein L3
gi|254803661|sp|B8D849|RL3_BUCAT RecName: Full=50S ribosomal protein L3
gi|219622158|gb|ACL30314.1| 50S ribosomal protein L3 [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|219624713|gb|ACL30868.1| 50S ribosomal protein L3 [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|311086246|gb|ADP66328.1| 50S ribosomal protein L3 [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|311086823|gb|ADP66904.1| 50S ribosomal protein L3 [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
gi|311087410|gb|ADP67490.1| 50S ribosomal protein L3 [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
gi|311087905|gb|ADP67984.1| 50S ribosomal protein L3 [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
Length = 209
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 91/210 (43%), Positives = 134/210 (63%), Gaps = 2/210 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ EG IPVTV+ L ++ + ++ + Y A+QV G K +
Sbjct: 1 MIGLVGKKIGMTRIFTEEGTSIPVTVIELKENRITQVKNINTDLYCAIQVTTGIKKSNRL 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F V+P + L+EFR K+++ +G + + F + VD+TG++ GKGFS
Sbjct: 61 NKPQSGHFLKSGVTPGRGLWEFRTDKNNN-FKIGQSITINIFNNVKKVDITGISKGKGFS 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG++G RVTV++L +V
Sbjct: 120 GTVKRWNFHTQDATHGNSLSHRVPGSIGQNQTPGRVFKGKKMAGQLGNTRVTVQSLNIVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+D++R L+LVKG VPGA S ++V+ + K
Sbjct: 180 IDERRNLLLVKGAVPGA-TGSDLIVKPAIK 208
>gi|320103617|ref|YP_004179208.1| 50S ribosomal protein L3P [Isosphaera pallida ATCC 43644]
gi|319750899|gb|ADV62659.1| LSU ribosomal protein L3P [Isosphaera pallida ATCC 43644]
Length = 212
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 83/211 (39%), Positives = 117/211 (55%), Gaps = 1/211 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT +Y +G+ +PVTVL C V+ +T + +GY AVQ+G + K K
Sbjct: 1 MVVGLLGRKVGMTQIYREDGQAVPVTVLECGPCTVLQVKTPETDGYCAVQLGYLDRKRKT 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+ RG + K+ Q + L +G + S F + VDVTG++ G+GF
Sbjct: 61 ATAAARGHARKAGNAEPKRYIREIRQDEPPTLKLGDQLTVSVFEAIKRVDVTGVSKGRGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KRH F GLRATHGV HR GS+G DP R K + G G +VT NLEVV
Sbjct: 121 AGVVKRHGFRGLRATHGVKRMHRHPGSSGPSADPSRTRKGIRKPGHFGHAKVTALNLEVV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
VD L++VKG VPG ++ VR + +
Sbjct: 181 KVDPDANLLVVKGAVPGP-NGGFVTVRQTNR 210
>gi|153816252|ref|ZP_01968920.1| hypothetical protein RUMTOR_02501 [Ruminococcus torques ATCC 27756]
gi|145846435|gb|EDK23353.1| hypothetical protein RUMTOR_02501 [Ruminococcus torques ATCC 27756]
Length = 242
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 88/229 (38%), Positives = 124/229 (54%), Gaps = 20/229 (8%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
M+ ++A K+GMT ++N +G IPVTVL C V +T++ +GY AVQVG + K K
Sbjct: 16 MKKAILATKVGMTQIFNHEDGVLIPVTVLQAGPCVVTQVKTVENDGYSAVQVGYVDKKDK 75
Query: 60 NVSKP----------------MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103
V+K +G F VS K+ + EFR ++ + F
Sbjct: 76 IVTKDGSGRKAIAHRNGVTKAEKGHFDKAGVSGKRYVKEFRFDNAEE-YALAQEIKADIF 134
Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163
G +D T ++ GKGF GA+KRH THG S HR GS G DP +VFK KKM
Sbjct: 135 AEGDHIDATAISKGKGFQGAIKRHGQSRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKM 193
Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
G+MG ++TV+NLE+V VD + L+LVKG VPG KK + ++++ K
Sbjct: 194 PGQMGNKKITVQNLEIVRVDAENNLLLVKGSVPGPKK-CLVTIKETVKG 241
>gi|325510539|gb|ADZ22175.1| 50S ribosomal protein L3 [Clostridium acetobutylicum EA 2018]
Length = 210
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 89/212 (41%), Positives = 132/212 (62%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ G++ +KLGMT ++N EG+ +PVTV+ C V+ +T +K GY A+QVG G + K
Sbjct: 2 MKKGILGKKLGMTQIFNEEGKVVPVTVIEAGPCVVIQKKTSEKEGYDAIQVGFGTIREKL 61
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP++G F+ NV K+ + EFR+ +D VG+ F G+ VDV+G++ GKGF
Sbjct: 62 VNKPLKGHFAKGNVELKRFVKEFRL-EDTSSYEVGAEIKADIFAAGEKVDVSGVSKGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G ++R +HG S HR+ GS G DP R FK+KKM G MG TV N+EV
Sbjct: 121 QGTIRRWGAHRGPMSHG-SKFHRAVGSMGGSSDPSRTFKSKKMPGHMGHVNTTVLNVEVA 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V ++ LIL+KG VPG K S++++++S K+
Sbjct: 180 KVIPEKNLILIKGGVPGPNK-SFVVIKNSVKA 210
>gi|289523369|ref|ZP_06440223.1| 50S ribosomal protein L3 [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503061|gb|EFD24225.1| 50S ribosomal protein L3 [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 209
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 92/208 (44%), Positives = 129/208 (62%), Gaps = 2/208 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ K+GMT +++ EG+ +PVTV+ C+VV R + Y A+ +G G+ K
Sbjct: 1 MSLGILGVKVGMTQIFDEEGQAVPVTVVEAGPCKVVALRRPEVEMYSAIVLGFGKVKAHR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KPM G + + PK+ L EFR+ D VG + F VG++VDVTG + GKGF
Sbjct: 61 LNKPMLGVYKKAGIEPKRWLREFRLD-DVTGYEVGQTIDVTIFEVGEVVDVTGTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKRH FGG A+HG S+ HR GS+G P VFK K M GRMG RVTVKNL+VV
Sbjct: 120 AGVMKRHGFGGGPASHGASLFHRRAGSSGASSFPSHVFKGKTMPGRMGNERVTVKNLKVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
+VD + L+L+KG +PG +N ++V
Sbjct: 180 AVDKENNLLLIKGAIPGP-RNGLVMVHK 206
>gi|157826063|ref|YP_001493783.1| 50S ribosomal protein L3 [Rickettsia akari str. Hartford]
gi|166234584|sp|A8GPF0|RL3_RICAH RecName: Full=50S ribosomal protein L3
gi|157800021|gb|ABV75275.1| 50S ribosomal protein L3 [Rickettsia akari str. Hartford]
Length = 215
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 111/212 (52%), Positives = 163/212 (76%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+G++A+K+GMT V+N +G RIP+T++ +D+CQVV H+TL+K+GY A+ +G + K+
Sbjct: 1 MRTGIIAQKIGMTSVFNDKGERIPLTLVKVDDCQVVGHKTLEKHGYNALVIGIKDKKISR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KPM+ F++ +SPK KL EFR+ + + + + + +F GQ VD+T TIGKGF
Sbjct: 61 VTKPMKQVFANAKISPKTKLKEFRISEG-NFIDIAANLEVDHFMAGQFVDITATTIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++
Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIF 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+VD +R LI+++G +PG KNS++ ++D+ K
Sbjct: 180 AVDRERKLIMIRGSIPG-HKNSYLSIKDAVKK 210
>gi|297834662|ref|XP_002885213.1| hypothetical protein ARALYDRAFT_479224 [Arabidopsis lyrata subsp.
lyrata]
gi|297331053|gb|EFH61472.1| hypothetical protein ARALYDRAFT_479224 [Arabidopsis lyrata subsp.
lyrata]
Length = 323
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 100/209 (47%), Positives = 144/209 (68%), Gaps = 2/209 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+G++A K GMT +++ G R+P+++L +D+ V +T++K G A+Q+G G+ K K++
Sbjct: 75 RTGIIAVKCGMTALWDKWGARVPISILWVDDNIVSQVKTVEKEGIFALQIGCGQKKPKHL 134
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SK + G F + V K+KL EF V + D LLPVG+ +F GQ VDVTG+T GKGF
Sbjct: 135 SKAVVGHFRAQGVPLKRKLREFPVTE-DALLPVGTSLGVRHFVPGQYVDVTGITRGKGFQ 193
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRH F G+ +HG S+SHRS GSTG R PG+VFK KKMAGRMG ++ TVKN+ V
Sbjct: 194 GCMKRHGFSGMPGSHGASLSHRSGGSTGQRDAPGKVFKGKKMAGRMGADQRTVKNVWVYK 253
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
+D R L+ V+G VPGA+ N ++ ++D++
Sbjct: 254 IDPARNLMWVRGQVPGAEGN-FVFIKDAW 281
>gi|225376409|ref|ZP_03753630.1| hypothetical protein ROSEINA2194_02051 [Roseburia inulinivorans DSM
16841]
gi|225211785|gb|EEG94139.1| hypothetical protein ROSEINA2194_02051 [Roseburia inulinivorans DSM
16841]
Length = 227
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 85/230 (36%), Positives = 120/230 (52%), Gaps = 19/230 (8%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV-- 58
M+ ++A K+GMT ++N +G +PVTVL C V +T++ +GY AVQV + K
Sbjct: 1 MKKAILATKVGMTQIFNADGVLVPVTVLEAGPCSVTQIKTVENDGYSAVQVAFADKKERI 60
Query: 59 --------------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
V+K G F+ VS K+ + EF+ ++ +G V F
Sbjct: 61 VNKDANGKKEIRNRHGVNKAQMGHFAKAGVSGKRFVKEFK-FENAAEYNLGDVIKADIFA 119
Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
G +D T ++ GKGF GA+KR HG S HR GS G P RVFK K M
Sbjct: 120 EGDKIDATAISKGKGFQGAIKRFGQHRGPMAHG-SKFHRHQGSNGACSSPSRVFKGKGMP 178
Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
G MG +VT +NLEVV VD + L+LVKG VPGAKK + ++++ K+
Sbjct: 179 GHMGSVKVTTQNLEVVRVDAENNLLLVKGAVPGAKK-CLVTIKETVKAGK 227
>gi|119025339|ref|YP_909184.1| 50S ribosomal protein L3 [Bifidobacterium adolescentis ATCC 15703]
gi|154486747|ref|ZP_02028154.1| hypothetical protein BIFADO_00572 [Bifidobacterium adolescentis
L2-32]
gi|166233119|sp|A1A069|RL3_BIFAA RecName: Full=50S ribosomal protein L3
gi|118764923|dbj|BAF39102.1| 50S ribosomal protein L3 [Bifidobacterium adolescentis ATCC 15703]
gi|154084610|gb|EDN83655.1| hypothetical protein BIFADO_00572 [Bifidobacterium adolescentis
L2-32]
Length = 213
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 82/212 (38%), Positives = 121/212 (57%), Gaps = 2/212 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+ ++ +KLGM+ V++ G +PVT++ + V ++ + +GY AVQ+G G+ V
Sbjct: 4 RTALLGKKLGMSQVWDENGFFVPVTLVDVSTNVVTAVKSEESDGYKAVQLGYGQVDPTKV 63
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+ G F+ V+P++ L E R ++ G + F G LVDVTG T GKGF+
Sbjct: 64 TKPLAGHFAKAGVTPRRHLAEVRTDNAEE-FEPGQELTAELFPEGTLVDVTGTTKGKGFA 122
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR F R THG + R GS G P R+ K K+MAGRMG T NL +VS
Sbjct: 123 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTNTALNLTIVS 182
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D + G++ +KG +PG K S +LVR + K A
Sbjct: 183 SDVENGVLAIKGAIPGP-KGSIVLVRSAVKGA 213
>gi|330718972|ref|ZP_08313572.1| 50S ribosomal protein L3 [Leuconostoc fallax KCTC 3537]
Length = 226
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 81/220 (36%), Positives = 115/220 (52%), Gaps = 8/220 (3%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ G I VT + V+ + + +GY AVQ+G + +
Sbjct: 1 MTKGILGRKVGMTQVFTETGELIAVTAVEATPNVVLQLKNAETDGYSAVQLGYQDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G N +PK+ + E R + + VG F G VDVTG+T G GF
Sbjct: 61 SNKPEQGHAKKANTTPKRYIREIRDAEGE--FNVGDEIKVDTFQAGDYVDVTGITKGHGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KR HG S HR GS G RVFK K + GRMG N+ T++N+ +V
Sbjct: 119 QGAIKRLGQSRGPMAHG-SRYHRRPGSMGAI--INRVFKGKLLPGRMGNNKRTMQNVAIV 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
VD + L+L+KG VPGA K S + ++ + K VN K
Sbjct: 176 HVDVENNLLLLKGNVPGANK-SLLTIKSTVK--VNAKHPA 212
>gi|196019520|ref|XP_002118992.1| hypothetical protein TRIADDRAFT_35046 [Trichoplax adhaerens]
gi|190577417|gb|EDV18523.1| hypothetical protein TRIADDRAFT_35046 [Trichoplax adhaerens]
Length = 217
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 104/215 (48%), Positives = 150/215 (69%), Gaps = 2/215 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+G++A+K+GMT ++ G IPVT++ +D V+ +T +KNGY VQ+ A + K + +
Sbjct: 5 RTGLIAKKVGMTQIFKENGEVIPVTMILVDENIVLSVKTKEKNGYNGVQLAAFDQKPQRL 64
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SK ++G F +S KKK+ EF V ++ +LL VG ++F Q VD+TG++IGKG++
Sbjct: 65 SKSVKGSFEKAKISAKKKMKEFIVHEN-NLLKVGDKVDVNHFKKNQYVDITGISIGKGYA 123
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRHNF GL ATHGVSISHRS GSTG QDPGRVFK KKMAG+MG +VT +N++V+
Sbjct: 124 GTMKRHNFKGLEATHGVSISHRSAGSTGQCQDPGRVFKGKKMAGQMGNKKVTTQNIKVID 183
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
+D + L++VKG VPG N ++ ++D+ K AV
Sbjct: 184 IDSELNLLIVKGAVPGC-NNGYLYIKDAIKKAVPR 217
>gi|329945684|ref|ZP_08293414.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 170 str.
F0386]
gi|328528492|gb|EGF55466.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 170 str.
F0386]
Length = 222
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 89/209 (42%), Positives = 126/209 (60%), Gaps = 2/209 (0%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ KLGMT +++ G PVTV+ +D V RT++ +GY AVQ+ G+ + V+KP
Sbjct: 16 LLGTKLGMTQIWDENGVLRPVTVVRVDTNVVTQVRTIETDGYEAVQLAFGDINARKVTKP 75
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+ G F+ V P++ + E R G + F VGQLVDVTG + GKGF+G M
Sbjct: 76 LAGHFAKAGVEPRRHVAEVRTS-LASEFTPGQELAADTFEVGQLVDVTGTSKGKGFAGVM 134
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KRH F G+ A+HG +HR GS G PGR+FK +MAGRMG R TV+NL++ VD
Sbjct: 135 KRHGFAGVGASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGHARRTVQNLKIRGVDV 194
Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+G++LV G +PG K S ++VR + K A
Sbjct: 195 DKGVLLVNGAIPGP-KGSVVVVRTAVKGA 222
>gi|302849682|ref|XP_002956370.1| mitochondrial ribosomal protein L3 [Volvox carteri f. nagariensis]
gi|300258276|gb|EFJ42514.1| mitochondrial ribosomal protein L3 [Volvox carteri f. nagariensis]
Length = 428
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 96/209 (45%), Positives = 132/209 (63%), Gaps = 2/209 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
+R G +A K GMT ++ G R+P+TVL +D CQVV +T + +G A+ +GAG + K
Sbjct: 151 LRVGCIATKAGMTQEWDEHGVRVPLTVLWIDECQVVGVKTHEVHGRTALMLGAGHKRQKC 210
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+S GFF V + KK + E+ V + D LLP+G+ + ++F GQ VDVTG T KGF
Sbjct: 211 MSPSQAGFFLKVGLPFKKLVAEWPVSE-DALLPMGTHITAAHFVAGQRVDVTGWTKYKGF 269
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G MKR F G A+HGVS+SHR+ G+ G RQDPG+V+K KK+ G MG R TV + V
Sbjct: 270 QGVMKRWGFKGQPASHGVSLSHRAPGAIGNRQDPGKVWKGKKLPGCMGDERRTVHHCLVY 329
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
VD R L+ ++G VPG K S + +RDS
Sbjct: 330 KVDAARNLVYIRGQVPGPKGRS-VYLRDS 357
>gi|116671521|ref|YP_832454.1| 50S ribosomal protein L3 [Arthrobacter sp. FB24]
gi|171855202|sp|A0JZ84|RL3_ARTS2 RecName: Full=50S ribosomal protein L3
gi|116611630|gb|ABK04354.1| LSU ribosomal protein L3P [Arthrobacter sp. FB24]
Length = 216
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 92/211 (43%), Positives = 125/211 (59%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT V++ + IPVTV+ D+ + R D +GY+AVQ+G G+ + V+
Sbjct: 8 KGLLGTKLGMTQVWDENNKLIPVTVVQADSNVITQLRNADVDGYVAVQIGYGQIDPRKVT 67
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP+ G F V+P++ + E R D +G S F GQ +DV G T GKGF+G
Sbjct: 68 KPLAGHFEKAGVTPRRHVVELR-TADAAEYELGQELSVEVFEAGQKIDVVGTTKGKGFAG 126
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F G+ A+HG +HR GS G P RVFK KMAGRMG R T NL V +V
Sbjct: 127 VMKRHGFHGVGASHGAHKNHRKPGSIGGASTPSRVFKGMKMAGRMGAVRHTTLNLTVHAV 186
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D ++ L+L+KG VPGA + +LVR + K A
Sbjct: 187 DVEKSLLLIKGAVPGA-RGQVVLVRTAVKGA 216
>gi|197117323|ref|YP_002137750.1| 50S ribosomal protein L3 [Geobacter bemidjiensis Bem]
gi|226725180|sp|B5EFQ0|RL3_GEOBB RecName: Full=50S ribosomal protein L3
gi|197086683|gb|ACH37954.1| ribosomal protein L3 [Geobacter bemidjiensis Bem]
Length = 211
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 89/214 (41%), Positives = 123/214 (57%), Gaps = 3/214 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGMT ++ +GRRI VTV+ C VV +++ K+GY A+QVG G
Sbjct: 1 MNKGLIGKKLGMTQIFAEDGRRIAVTVVEAGPCVVVQKKSVAKDGYSAIQVGFGAKDASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+ G E R+ D +G V + F G LVDVTG +IGKGF
Sbjct: 61 ANAAQVGHCKGAGAGVFTHYRELRMDNTDA-YKLGDVIEAAVFEEGDLVDVTGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR F G R++HG S HR+ GS GC P RVFKNKKM G++G +VTV+ L+VV
Sbjct: 120 AGVIKRWGFKGGRSSHG-SRFHRAPGSIGCSATPSRVFKNKKMPGQLGNEKVTVQRLKVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VD LIL+ G +PG+ N +L++DS K+
Sbjct: 179 RVDAADNLILLGGAIPGSA-NGVVLIKDSVKAKK 211
>gi|259502531|ref|ZP_05745433.1| 50S ribosomal protein L3 [Lactobacillus antri DSM 16041]
gi|259169483|gb|EEW53978.1| 50S ribosomal protein L3 [Lactobacillus antri DSM 16041]
Length = 220
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 78/215 (36%), Positives = 121/215 (56%), Gaps = 4/215 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT V+ G +PVTV+ + V+ +T++ +GY AVQ+G + +
Sbjct: 1 MAKGILGKKVGMTQVFTDNGELVPVTVIDVTPNVVMQVKTVENDGYNAVQLGFDDKREIL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + E R + D + VG F G+ VDVTG+T G G+
Sbjct: 61 SNKPEQGHAAKANTTPKRFIGEIRDAELGDDIKVGDEVKADVFAEGETVDVTGVTKGHGY 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G + + N HG S HR GS G RVFK K+ GRMG VT+++L+VV
Sbjct: 121 QGNIHKDNQSRGPMAHG-SRYHRRPGSLGAI--INRVFKGMKLPGRMGNKTVTMQHLQVV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
VD ++L+KG VPGA K S++ +++S K+
Sbjct: 178 KVDLDNNVLLIKGNVPGANK-SYVTIKNSVKANTK 211
>gi|303233143|ref|ZP_07319816.1| 50S ribosomal protein L3 [Atopobium vaginae PB189-T1-4]
gi|302480728|gb|EFL43815.1| 50S ribosomal protein L3 [Atopobium vaginae PB189-T1-4]
Length = 221
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 87/209 (41%), Positives = 123/209 (58%), Gaps = 3/209 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M + ++ RK+GMT V++ +PVTV+ C V +T +GY A+Q+G GE K+
Sbjct: 16 MVTTILGRKIGMTQVWDENDNVVPVTVIQAGPCVVSQVKTKSSDGYDAIQIGFGEVSSKH 75
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KPM G F + NV P + L E RV+ ++ G + F VDVTG++ GKGF
Sbjct: 76 VNKPMEGHFKAHNVEPLRHLCEVRVENGEE-HACGDTITVKDFADATAVDVTGVSKGKGF 134
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR NF HG S + R GS G PGRV K MAG MG R+TVKNL++V
Sbjct: 135 QGTIKRWNFSSGPKAHG-SRNQREPGSIGQCAYPGRVRKGLHMAGHMGDERITVKNLKLV 193
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
+D+++ L+LVKG VPG KN+ + +R +
Sbjct: 194 RIDEEQNLLLVKGAVPGG-KNALLTIRMA 221
>gi|307154842|ref|YP_003890226.1| 50S ribosomal protein L3 [Cyanothece sp. PCC 7822]
gi|306985070|gb|ADN16951.1| 50S ribosomal protein L3 [Cyanothece sp. PCC 7822]
Length = 212
Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 89/212 (41%), Positives = 123/212 (58%), Gaps = 4/212 (1%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
M G++ KLGMT +++ G IPVTV+H C + +T + +GY ++Q+G GE K K
Sbjct: 1 MSVGIIGTKLGMTQIFDKETGIAIPVTVIHAGPCPITQIKTPETDGYSSIQIGYGEVKEK 60
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
++KP+ G P K L E+R+ + +G F G +VDV G TIG+G
Sbjct: 61 ALNKPLLGHLKKSESIPLKNLKEYRLDNPE-QYQLGDALKVDIFQPGDIVDVAGKTIGRG 119
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G KRHNF THG S +HR GSTG PGRV+ K+MAGR GG +VT++ L V
Sbjct: 120 FAGYQKRHNFKRGSMTHG-SKNHRLPGSTGAGTTPGRVYPGKRMAGRYGGTQVTIRKLTV 178
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
V VD +R LIL+KG VPG N + + + K
Sbjct: 179 VQVDPERNLILIKGAVPGKPGN-LLSITPAKK 209
>gi|148243215|ref|YP_001228372.1| 50S ribosomal protein L3 [Synechococcus sp. RCC307]
gi|166234603|sp|A5GVW0|RL3_SYNR3 RecName: Full=50S ribosomal protein L3
gi|147851525|emb|CAK29019.1| 50S ribosomal protein L3 [Synechococcus sp. RCC307]
Length = 215
Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 87/216 (40%), Positives = 126/216 (58%), Gaps = 3/216 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGM+ ++ EGR +PVTV+ C++ +T +GY AVQVG G+ + K
Sbjct: 1 MSIGILGKKLGMSQFFDDEGRAVPVTVIEAGPCRITQVKTPTNDGYSAVQVGFGDVREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V++P +G + L E+RV D + +GS + F GQ VDV+G T+G+GF
Sbjct: 61 VNQPAKGHLKKSGEDLLRHLKEYRVDSTDG-VELGSSVTVDAFEPGQKVDVSGDTMGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
SG KRH F THG S +HR GSTG PGR++ K+MAGR GG + TVK L V+
Sbjct: 120 SGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGTKTTVKGLVVL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
VD +R L++VKG VPG + + +R + +
Sbjct: 179 KVDSERNLLVVKGSVPGKP-GALLSIRPAVRVGAKA 213
>gi|294786411|ref|ZP_06751665.1| 50S ribosomal protein L3 [Parascardovia denticolens F0305]
gi|315225973|ref|ZP_07867761.1| 50S ribosomal protein L3 [Parascardovia denticolens DSM 10105]
gi|294485244|gb|EFG32878.1| 50S ribosomal protein L3 [Parascardovia denticolens F0305]
gi|315120105|gb|EFT83237.1| 50S ribosomal protein L3 [Parascardovia denticolens DSM 10105]
Length = 217
Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 85/213 (39%), Positives = 121/213 (56%), Gaps = 2/213 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+ +V +KLGM+ +++ G +PVT++ + V ++ D++GY AVQ+G G V
Sbjct: 7 RTALVGKKLGMSQIWDENGFFVPVTLVDVSTNVVTAVKSEDRDGYKAVQLGYGAIDPTKV 66
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+ G F+ V+P++ L E R +D G + F+ G VDVTG T GKGF+
Sbjct: 67 TKPLAGHFAKAGVTPRRHLVEVR-TEDAGSYQPGQELAADTFSDGDQVDVTGTTKGKGFA 125
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR F R THG + R GS G P RV K K+MAGRMG T + L VVS
Sbjct: 126 GTIKRWGFKSYRRTHGSHKNERRPGSIGACATPSRVLKGKRMAGRMGHVTHTTQGLTVVS 185
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
D + GLI +KG +PG K + +LVR + K A
Sbjct: 186 ADVENGLIAIKGAIPGP-KGAIVLVRSAVKGAK 217
>gi|221632978|ref|YP_002522201.1| 50S ribosomal protein L3 [Thermomicrobium roseum DSM 5159]
gi|254803699|sp|B9KZY7|RL3_THERP RecName: Full=50S ribosomal protein L3
gi|221155754|gb|ACM04881.1| ribosomal protein L3 [Thermomicrobium roseum DSM 5159]
Length = 214
Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 98/211 (46%), Positives = 127/211 (60%), Gaps = 5/211 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RKLGMT +++ EGR IPVTVL + C V +T D++GY AVQ+G G K +
Sbjct: 1 MIEGLLGRKLGMTQIFDDEGRAIPVTVLEVGPCVVTQVKTSDRDGYQAVQLGFGHRKRQ- 59
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++PM+G + SP + + D VG V + F GQLVDV G G+GF
Sbjct: 60 -NRPMQGHLRASGASP--RYLKEVRVDDATRFQVGQVIDCTIFQPGQLVDVIGWRKGRGF 116
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH F G THG S HR+ GS G DPGRV K K+MAGRMG RVTV+NL V
Sbjct: 117 QGGVKRHGFAGGPKTHGQSDRHRAPGSIGPTTDPGRVHKGKRMAGRMGPVRVTVQNLRVE 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
VD +R L+LV+G VPG N ++VR + K
Sbjct: 177 RVDPQRNLVLVRGAVPGHP-NGLVIVRYAVK 206
>gi|311896570|dbj|BAJ28978.1| putative ribosomal protein L3 [Kitasatospora setae KM-6054]
Length = 215
Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 95/211 (45%), Positives = 124/211 (58%), Gaps = 3/211 (1%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAVQVGAGEAKVKNV 61
G++ KLGMT V++ R +PVTV+ V T D GY AVQ+G GE + V
Sbjct: 6 KGILGEKLGMTQVWDENNRVVPVTVVKAGPNVVTQVHTADSPAGYDAVQIGFGEIDPRKV 65
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP++G F+ V+P++ L E R D +G + F G VDVTG + GKGF+
Sbjct: 66 NKPLQGHFAKAGVTPRRHLVELR-TADASEYTLGQEITAELFEAGVKVDVTGTSKGKGFA 124
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRHNF GL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +
Sbjct: 125 GVMKRHNFKGLGAGHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGHERVTTQNLTVHA 184
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD ++GL+L+KG +PG +LVR + K
Sbjct: 185 VDAEKGLLLIKGAIPGP-NGGLVLVRTAAKG 214
>gi|150008984|ref|YP_001303727.1| 50S ribosomal protein L3 [Parabacteroides distasonis ATCC 8503]
gi|255014815|ref|ZP_05286941.1| 50S ribosomal protein L3 [Bacteroides sp. 2_1_7]
gi|256841015|ref|ZP_05546522.1| 50S ribosomal protein L3 [Parabacteroides sp. D13]
gi|262383874|ref|ZP_06077010.1| 50S ribosomal protein L3 [Bacteroides sp. 2_1_33B]
gi|298375783|ref|ZP_06985739.1| 50S ribosomal protein L3 [Bacteroides sp. 3_1_19]
gi|301312033|ref|ZP_07217955.1| 50S ribosomal protein L3 [Bacteroides sp. 20_3]
gi|166233171|sp|A6LEJ1|RL3_PARD8 RecName: Full=50S ribosomal protein L3
gi|149937408|gb|ABR44105.1| ribosomal protein L3 [Parabacteroides distasonis ATCC 8503]
gi|256736858|gb|EEU50185.1| 50S ribosomal protein L3 [Parabacteroides sp. D13]
gi|262294772|gb|EEY82704.1| 50S ribosomal protein L3 [Bacteroides sp. 2_1_33B]
gi|298266820|gb|EFI08477.1| 50S ribosomal protein L3 [Bacteroides sp. 3_1_19]
gi|300830135|gb|EFK60783.1| 50S ribosomal protein L3 [Bacteroides sp. 20_3]
Length = 205
Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 84/204 (41%), Positives = 123/204 (60%), Gaps = 4/204 (1%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT V++ EG+ +P TV+ + C V +TL+K+GY AVQ+G E K K+ ++
Sbjct: 3 GLLGKKIGMTSVFSAEGKNLPCTVIEVGPCVVTQIKTLEKDGYEAVQLGFQEKKEKHTTQ 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P G F V+P++ L EF+ + + +G V + + VDV G + GKGF G
Sbjct: 63 PEMGHFKKAGVAPQRHLAEFKNFETE--YKLGDVITVDFLEDAGFVDVVGTSKGKGFQGV 120
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G + THG R GS G P +VFK +M G+MG RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQMGNERVTVQNLQVIKV 180
Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
+ L+LVKG VPGA K S +L+
Sbjct: 181 MPEHNLLLVKGSVPGA-KGSILLI 203
>gi|296111429|ref|YP_003621811.1| ribosomal protein L3 [Leuconostoc kimchii IMSNU 11154]
gi|295832961|gb|ADG40842.1| ribosomal protein L3 [Leuconostoc kimchii IMSNU 11154]
Length = 227
Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 77/222 (34%), Positives = 121/222 (54%), Gaps = 7/222 (3%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ G I VTV+ V+ + + +GY A+Q+G + +
Sbjct: 1 MTKGILGRKVGMTQVFTETGELIAVTVVEATPNVVLQVKNAETDGYSALQLGYQDKRAVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G S N +PK+ + E ++ + G F G+ VDVTG+T G GF
Sbjct: 61 SNKPEQGHASKANTTPKRYIRE--IRNAEGEFNAGDEIKVDTFESGEYVDVTGITKGHGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +K+ +HG S HR GS G RVFK K + GRMG N+ T++N+ +V
Sbjct: 119 QGNIKKDGQSRGPMSHG-SRYHRRPGSMGAV--INRVFKGKLLPGRMGNNKRTMQNVAIV 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK-SAVNCKGKVS 221
VD + L+L+KG VPGA K S + ++ + K +A + + K++
Sbjct: 176 HVDVENNLLLLKGNVPGANK-SLLTIKSTVKTNAKHPEVKMA 216
>gi|302543361|ref|ZP_07295703.1| 50S ribosomal protein L3 [Streptomyces hygroscopicus ATCC 53653]
gi|302460979|gb|EFL24072.1| 50S ribosomal protein L3 [Streptomyces himastatinicus ATCC 53653]
Length = 214
Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 98/211 (46%), Positives = 127/211 (60%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
GV+ KLGMT V++ R +PVTV+ C V RT D +GY AVQ+ GE + V+
Sbjct: 6 KGVLGEKLGMTQVWDENNRVVPVTVVKAGPCVVTQVRTDDADGYDAVQIAFGEIDPRKVN 65
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP++G F+ +V+P++ L E R D +G + F G VDVTG + GKG +G
Sbjct: 66 KPLKGHFAKADVTPRRHLVELR-TADASEYTLGQEVTAEAFESGVKVDVTGTSKGKGTAG 124
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH FGGL A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +V
Sbjct: 125 VMKRHGFGGLGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAV 184
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D ++GL+L+KG VPG +LVR + K A
Sbjct: 185 DAEKGLLLIKGAVPGP-NGGLVLVRTAAKGA 214
>gi|229821623|ref|YP_002883149.1| ribosomal protein L3 [Beutenbergia cavernae DSM 12333]
gi|229567536|gb|ACQ81387.1| ribosomal protein L3 [Beutenbergia cavernae DSM 12333]
Length = 220
Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 84/211 (39%), Positives = 127/211 (60%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
+ ++ KLGMT V++ GR +PVTV+ + V RT + +GY AVQ+ G+ + V+
Sbjct: 12 TALLGTKLGMTQVWDDAGRLVPVTVVQVGTNVVSAVRTPETDGYSAVQLAFGQIDPRKVT 71
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
+P++G F+ V+P++ + E R D G + F GQ VDV G T GKG +G
Sbjct: 72 QPLKGHFAKAGVTPRRHVAEIR-TGDAAEYTPGQELTVEVFAAGQGVDVVGTTKGKGTAG 130
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F G+ A+HG +HR GS G P RVF+ +MAGRMG +R TV+NL++ +V
Sbjct: 131 VMKRHGFSGVGASHGAHRNHRKAGSIGGASTPSRVFRGLRMAGRMGNDRHTVQNLKIHAV 190
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D ++GL+LV G +PG + ++V+ + K A
Sbjct: 191 DAEKGLLLVTGALPGP-RGGLVVVKTASKEA 220
>gi|169823852|ref|YP_001691463.1| 50S ribosomal protein L3 [Finegoldia magna ATCC 29328]
gi|303234744|ref|ZP_07321370.1| 50S ribosomal protein L3 [Finegoldia magna BVS033A4]
gi|226725177|sp|B0RZU0|RL3_FINM2 RecName: Full=50S ribosomal protein L3
gi|167830657|dbj|BAG07573.1| 50S ribosomal protein L3 [Finegoldia magna ATCC 29328]
gi|302494085|gb|EFL53865.1| 50S ribosomal protein L3 [Finegoldia magna BVS033A4]
Length = 209
Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 90/209 (43%), Positives = 129/209 (61%), Gaps = 3/209 (1%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ +K+GMT ++N +G +PVTV+ V +T +K GY A+QVG E K K+V++P
Sbjct: 4 ILGKKIGMTQIFNEDGSVVPVTVIEAGPMVVTQIKTKEKEGYNAIQVGYIEKKEKHVNQP 63
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
MRG F VS KK L EF++ DD+ +G F G +VDV G++ GKG GA+
Sbjct: 64 MRGHFGKAGVSFKKHLREFKI-NDDEQFNLGDEIKLDIFQDGDVVDVIGISKGKGTQGAI 122
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
RHN+ HG S SHR G+ P RVFK +K +G+MG +RVTV+NL++V VD+
Sbjct: 123 VRHNYSRGPMGHG-SKSHRVAGARSAGSYPARVFKGRKGSGKMGHDRVTVQNLKIVKVDN 181
Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+R L+L+KG VPG K + VR++ KS
Sbjct: 182 ERNLLLIKGAVPG-NKGGVVTVREAIKSK 209
>gi|166368484|ref|YP_001660757.1| 50S ribosomal protein L3 [Microcystis aeruginosa NIES-843]
gi|189042851|sp|B0JI03|RL3_MICAN RecName: Full=50S ribosomal protein L3
gi|166090857|dbj|BAG05565.1| 50S ribosomal protein L3 [Microcystis aeruginosa NIES-843]
Length = 212
Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats.
Identities = 89/212 (41%), Positives = 123/212 (58%), Gaps = 4/212 (1%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
M G++ KLGMT +++ G IPVTV+ C V +T +GY ++QVG K K
Sbjct: 1 MSIGILGTKLGMTQIFDNKTGVAIPVTVVQAGPCPVTQVKTKKTDGYESIQVGYKTVKEK 60
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
++KP+ G + VSP + L E+R+ +D +G + F G LVDV G TIG+G
Sbjct: 61 ALNKPLLGHLAKAGVSPLRHLIEYRL-EDASAYTLGQEITADIFQEGDLVDVAGTTIGRG 119
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
FSG KRHNF THG S +HR GSTG PGRVF K+MAG+ G +VT++ L V
Sbjct: 120 FSGYQKRHNFKRGNMTHG-SKNHRLPGSTGAGTTPGRVFPGKRMAGQYGSTQVTIRKLSV 178
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
V +D +R LIL+KG VPG + + + + K
Sbjct: 179 VKIDSERNLILIKGAVPGKP-GTLLNITPAKK 209
>gi|148655337|ref|YP_001275542.1| 50S ribosomal protein L3 [Roseiflexus sp. RS-1]
gi|166234588|sp|A5USI9|RL3_ROSS1 RecName: Full=50S ribosomal protein L3
gi|148567447|gb|ABQ89592.1| LSU ribosomal protein L3P [Roseiflexus sp. RS-1]
Length = 210
Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats.
Identities = 91/213 (42%), Positives = 126/213 (59%), Gaps = 3/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V++ G+ IPVT++ + C V RT +++GY AVQ+G E K K+
Sbjct: 1 MIEGLLGRKIGMTQVFDATGQVIPVTIIEVGPCVVTQIRTKERDGYEAVQIGYQEVKAKS 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+++P +G + + VG V + FT GQ VDV G + G+GF
Sbjct: 61 LTRPEQGHLRGAGK--LLRHLREFRADNIADHKVGDVLTVEMFTPGQRVDVIGTSKGRGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH FGG THG S R+ GS G DPG V KN +MAGRMG RVTV+NL VV
Sbjct: 119 QGVVKRHGFGGGPRTHGQSDRLRAPGSIGAGTDPGHVLKNTRMAGRMGNQRVTVQNLTVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
V +R L+LV+G +PGA KN ++VR + K +
Sbjct: 179 DVVPERNLLLVRGSIPGA-KNGLVMVRRAIKGS 210
>gi|295111422|emb|CBL28172.1| LSU ribosomal protein L3P [Synergistetes bacterium SGP1]
Length = 207
Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats.
Identities = 92/208 (44%), Positives = 133/208 (63%), Gaps = 2/208 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT +++ EG+ + VTV+ C VV RT ++NGY AV +G G K
Sbjct: 1 MGIGILGKKMGMTQIFDAEGQAVAVTVIAAGPCPVVAVRTPEQNGYSAVLLGFGAVKPHK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+SKP++G F V PK+ L EFR+ K + VG F G+ +DV+G++ GKGF
Sbjct: 61 LSKPVKGLFDKNKVEPKRTLREFRLDK-AEGYEVGQEIRVDLFEAGERIDVSGVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR++FGG + +HG S+ HR GS+G PGRVF K+M G MG ++VTVKNL V+
Sbjct: 120 AGVMKRYHFGGQQFSHGTSVEHRHGGSSGAISYPGRVFPGKRMPGHMGSDKVTVKNLTVM 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
+VD + L+LVKG VPGA K+ + +
Sbjct: 180 AVDLENNLLLVKGAVPGA-KDGLVALYK 206
>gi|15617118|ref|NP_240331.1| 50S ribosomal protein L3 [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|11134328|sp|P57591|RL3_BUCAI RecName: Full=50S ribosomal protein L3
gi|25294942|pir||A84991 50S ribosomal protein L3 [imported] - Buchnera sp. (strain APS)
gi|10039183|dbj|BAB13217.1| 50S ribosomal protein L3 [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
Length = 209
Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats.
Identities = 91/210 (43%), Positives = 133/210 (63%), Gaps = 2/210 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ EG IPVTV+ L ++ + ++ + Y A+QV G K +
Sbjct: 1 MIGLVGKKIGMTRIFTEEGTSIPVTVIELKENRITQVKNINTDLYCAIQVTTGIKKSNRL 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F V+P + L+EFR K+++ +G + + F + VD+TG++ GKGFS
Sbjct: 61 NKPQSGHFLKSGVTPGRGLWEFRTDKNNN-FKIGQSITINIFNNVKKVDITGISKGKGFS 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG++G RVTV++L +V
Sbjct: 120 GTVKRWNFHTQDATHGNSLSHRVPGSIGQNQTPGRVFKGKKMAGQLGNTRVTVQSLNIVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+D+ R L+LVKG VPGA S ++V+ + K
Sbjct: 180 IDEHRNLLLVKGAVPGA-TGSDLIVKPAIK 208
>gi|160902256|ref|YP_001567837.1| ribosomal protein L3 [Petrotoga mobilis SJ95]
gi|189042855|sp|A9BHA5|RL3_PETMO RecName: Full=50S ribosomal protein L3
gi|160359900|gb|ABX31514.1| ribosomal protein L3 [Petrotoga mobilis SJ95]
Length = 213
Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats.
Identities = 87/214 (40%), Positives = 127/214 (59%), Gaps = 4/214 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT V+ + + IPVTV+ C VV +T++ +GY A+Q+G E +
Sbjct: 1 MKGILGKKVGMTRVFKDD-KAIPVTVIKAGPCVVVQKKTVETDGYNAIQIGFEEIPERKA 59
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+ G F V P + L EFRV+ DD +G + F+ G+ +D+ G + G+G+S
Sbjct: 60 NKPLMGHFKKAQVKPLRYLREFRVENVDD-YEIGQKIDVTIFSEGEKIDLIGNSKGRGYS 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR NF G THG S HR GSTG P +VFK KKM G+ G RVT++N EVV
Sbjct: 119 GVMKRWNFRGGENTHG-SKFHRGLGSTGMATFPSKVFKGKKMPGQYGNERVTIQNSEVVY 177
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
+D + LI VKG VPGA + + +R++ K+
Sbjct: 178 IDVQNNLIAVKGGVPGA-RGGLVTIREAVKAKRP 210
>gi|320582593|gb|EFW96810.1| Mitochondrial ribosomal protein of the large subunit [Pichia
angusta DL-1]
Length = 272
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 108/211 (51%), Positives = 140/211 (66%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ K GMT Y+ G R+P TVL +D +VV ++T+DKNGY AVQVG G K+KN
Sbjct: 55 RPGLIGVKRGMTQFYSRNGDRVPATVLEIDQVEVVYNKTVDKNGYYAVQVGYG-HKLKNQ 113
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+K M G + + VSPK+ LFEF V+ ++ L+PVGS +F GQ VDV T GKGFS
Sbjct: 114 TKAMLGHYRNAKVSPKETLFEFEVKDENGLVPVGSQLKADHFKPGQFVDVISKTKGKGFS 173
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR NF GL ATHG S++HRS GSTG P RV KKMAG +G T+ NLEV+
Sbjct: 174 GVMKRWNFSGLPATHGTSLAHRSAGSTGMNTTPARVLPGKKMAGHLGDEWNTIFNLEVLD 233
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V+ ++G ILVKGCV G+ S++ +RD+ K
Sbjct: 234 VNAEKGYILVKGCVSGS-NGSYVQIRDALKK 263
>gi|213425750|ref|ZP_03358500.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
Length = 199
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 91/201 (45%), Positives = 125/201 (62%), Gaps = 2/201 (0%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
MT ++ +G IPVTV+ ++ +V + L +GY AVQV G K V+KP G F+
Sbjct: 1 MTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRVTKPEAGHFAK 60
Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
V + L+EFR+ + ++ VG S F + VDVTG + GKGF+G +KR NF
Sbjct: 61 AGVEAGRGLWEFRLAEGEE-YTVGQSISVELFADVKKVDVTGTSKGKGFAGTVKRWNFRT 119
Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
ATHG S+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV VD +R L+LV
Sbjct: 120 QDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVDAERNLLLV 179
Query: 192 KGCVPGAKKNSWILVRDSFKS 212
KG VPGA ++V+ + K+
Sbjct: 180 KGGVPGA-TGCDLIVKPAVKA 199
>gi|288925715|ref|ZP_06419647.1| 50S ribosomal protein L3 [Prevotella buccae D17]
gi|315606504|ref|ZP_07881519.1| 50S ribosomal protein L3 [Prevotella buccae ATCC 33574]
gi|288337653|gb|EFC76007.1| 50S ribosomal protein L3 [Prevotella buccae D17]
gi|315251910|gb|EFU31884.1| 50S ribosomal protein L3 [Prevotella buccae ATCC 33574]
Length = 204
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 87/204 (42%), Positives = 124/204 (60%), Gaps = 5/204 (2%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ RK+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G GEAK K SK
Sbjct: 3 GLIGRKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYKAVQLGFGEAKEKRTSK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P G F +PKK L E K D+ +G + F + VDV G++ GKGF G
Sbjct: 63 PQLGHFKKAGTTPKKHLAE---FKFDEEYNLGDTINVELFNDTKFVDVVGISKGKGFQGV 119
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F G ++THG R GS G P +VFK +MAG+MGG+RVT +NL+V+ V
Sbjct: 120 MKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMAGQMGGDRVTTQNLQVLKV 179
Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
++ L++VKG + G K S +L+
Sbjct: 180 IPEQNLLIVKGSIAGC-KGSTVLI 202
>gi|260886876|ref|ZP_05898139.1| 50S ribosomal protein L3 [Selenomonas sputigena ATCC 35185]
gi|330839326|ref|YP_004413906.1| 50S ribosomal protein L3 [Selenomonas sputigena ATCC 35185]
gi|260863475|gb|EEX77975.1| 50S ribosomal protein L3 [Selenomonas sputigena ATCC 35185]
gi|329747090|gb|AEC00447.1| 50S ribosomal protein L3 [Selenomonas sputigena ATCC 35185]
Length = 219
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 98/221 (44%), Positives = 133/221 (60%), Gaps = 5/221 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M ++ RKLGMT ++ EG +PVTV+ N V++++T++ +GY AVQ+G GE K K
Sbjct: 1 MSKAILGRKLGMTQIFTEEGTVVPVTVVESGNNVVIMNKTVENDGYNAVQIGFGEVKEKR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP++G F+ V+P + + E R+ D VG F G LVDVTG + GKGF
Sbjct: 61 VTKPLKGHFAKAGVAPVRFIREMRLT-DASEYNVGDTIGVDIFAAGDLVDVTGTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTG--CRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
+G +KRHNF HG S SHR GSTG GRV K KK+ G+MG RVTV+ L
Sbjct: 120 AGTIKRHNFARGPMGHG-SKSHREPGSTGAMISGHGGRVLKGKKLPGQMGHARVTVQRLS 178
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
VV VD +R LIL+KG +PG KK ++VR + K K +
Sbjct: 179 VVRVDAERNLILIKGAIPGPKKG-LVVVRATVKPDKPKKAE 218
>gi|197303812|ref|ZP_03168848.1| hypothetical protein RUMLAC_02551 [Ruminococcus lactaris ATCC
29176]
gi|197297105|gb|EDY31669.1| hypothetical protein RUMLAC_02551 [Ruminococcus lactaris ATCC
29176]
Length = 242
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 89/229 (38%), Positives = 126/229 (55%), Gaps = 20/229 (8%)
Query: 1 MRSGVVARKLGMTCVYNI-EGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
M+ ++A K+GMT ++N +G IPVTVL C V +T++ +GY AVQVG + K K
Sbjct: 16 MKKAILATKVGMTQIFNEEDGVLIPVTVLQAGPCVVTQVKTVENDGYSAVQVGYVDKKEK 75
Query: 60 NVSKPM----------------RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103
V+K +G F VS K+ + EFR ++ + + F
Sbjct: 76 IVTKDNSGKKSIAHRNGVTKAEKGHFDKAGVSGKRYVKEFR-FENAEEYTLAQEIKADIF 134
Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163
G +D T ++ GKGF GA+KRH THG S HR GS G DP +VFK KKM
Sbjct: 135 AAGDKIDATAISKGKGFQGAIKRHGQSRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKM 193
Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
G+MG ++TV+NLEVV VD + L+LVKG VPG KK + ++++ K+
Sbjct: 194 PGQMGNKKITVQNLEVVRVDAENNLLLVKGSVPGPKK-CLVTIKETVKA 241
>gi|86605866|ref|YP_474629.1| 50S ribosomal protein L3 [Synechococcus sp. JA-3-3Ab]
gi|109893563|sp|Q2JV81|RL3_SYNJA RecName: Full=50S ribosomal protein L3
gi|86554408|gb|ABC99366.1| ribosomal protein L3 [Synechococcus sp. JA-3-3Ab]
Length = 214
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 80/210 (38%), Positives = 120/210 (57%), Gaps = 2/210 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT +++ EG IPVTV+ C V +T +GY AVQ+G K+
Sbjct: 1 MALGILGRKVGMTQIFSPEGLAIPVTVVQAGPCTVTQIKTQATDGYNAVQLGYWPTAEKH 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+++ RG S V+ + + +G + F+ GQL+DV G +IG+GF
Sbjct: 61 LTRAQRGHLSKAGVTELLRHLREFRVDQPEAYQLGQKITVEIFSPGQLLDVAGTSIGRGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G KRH+FG +HG S +HR GS G PGRVF +MAGRMGG RVT++ L++V
Sbjct: 121 AGYQKRHHFGRGPMSHG-SKNHRRPGSVGAGTTPGRVFPGLRMAGRMGGCRVTIRKLQLV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
VD +R L+++KG VPG + + + +
Sbjct: 180 QVDPERNLLIIKGSVPGVE-GGLLEITPAK 208
>gi|320531960|ref|ZP_08032861.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 171 str.
F0337]
gi|320135827|gb|EFW27874.1| 50S ribosomal protein L3 [Actinomyces sp. oral taxon 171 str.
F0337]
Length = 222
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 90/209 (43%), Positives = 127/209 (60%), Gaps = 2/209 (0%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ KLGMT +++ G PVTV+ +D V RT++ +GY AVQ+ G+ + V+KP
Sbjct: 16 LLGTKLGMTQIWDENGVLRPVTVVRVDTNVVTQVRTIETDGYEAVQLAFGDIDARKVTKP 75
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+ G F+ V V P++ + E R G + F VGQLVDVTG + GKGF+G M
Sbjct: 76 LAGHFAKVGVEPRRHVAEIRTS-LASEFTPGQELAADTFEVGQLVDVTGTSKGKGFAGVM 134
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KRH F G+ A+HG +HR GS G PGR+FK +MAGRMG R TV+NL++ VD
Sbjct: 135 KRHGFAGVGASHGAHRNHRKPGSIGACATPGRIFKGLRMAGRMGHARRTVQNLKIRGVDV 194
Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+G++LV G +PG K S ++VR + K A
Sbjct: 195 DKGVLLVNGAIPGP-KGSVVVVRTAVKGA 222
>gi|169830030|ref|YP_001700188.1| 50S ribosomal protein L3 [Lysinibacillus sphaericus C3-41]
gi|226730531|sp|B1HMY0|RL3_LYSSC RecName: Full=50S ribosomal protein L3
gi|168994518|gb|ACA42058.1| 50S ribosomal protein L3 [Lysinibacillus sphaericus C3-41]
Length = 209
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 91/213 (42%), Positives = 128/213 (60%), Gaps = 4/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY A+QVG + +VK
Sbjct: 1 MAKGILGRKIGMTQVFAENGDLIPVTVIEATPNVVLQKKTVETDGYEAIQVGFEDKRVKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EFR ++ VG F G ++DVTG+T GKGF
Sbjct: 61 SNKPQQGHVAKANTAPKRFIREFRNVNVEE-YEVGQEVKVEIFAEGDVIDVTGVTKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFK KK+ G+MGGN VT++NLE+V
Sbjct: 120 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKQKKLPGQMGGNVVTIQNLEIV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD R L+LVKG VPG+KK + + V+ + K+
Sbjct: 178 KVDTDRNLLLVKGNVPGSKK-ALVTVKTASKAK 209
>gi|24380367|ref|NP_722322.1| 50S ribosomal protein L3 [Streptococcus mutans UA159]
gi|42559636|sp|Q8DS16|RL3_STRMU RecName: Full=50S ribosomal protein L3
gi|24378386|gb|AAN59628.1|AE015024_20 50S ribosomal protein L3 [Streptococcus mutans UA159]
Length = 208
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 93/214 (43%), Positives = 130/214 (60%), Gaps = 6/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + +
Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + + +PK+ + EF+ + L VG + F G +VDVTG T GKGF
Sbjct: 61 SNKPAKGHVAKADTAPKRFIREFKNIEG---LEVGQEITVEQFEAGDVVDVTGTTKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH HG S HR GS G P RVFK K +AGRMGGNRVTV+NLEVV
Sbjct: 118 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGNRVTVQNLEVV 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V ++ +IL+KG VPGAKK S I+++ + K+A
Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLIIIKSAVKAAK 208
>gi|326799127|ref|YP_004316946.1| 50S ribosomal protein L3 [Sphingobacterium sp. 21]
gi|326549891|gb|ADZ78276.1| 50S ribosomal protein L3 [Sphingobacterium sp. 21]
Length = 205
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 87/206 (42%), Positives = 126/206 (61%), Gaps = 4/206 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT +++ EG+ IP TV+ C V RT++ +GY A+Q+ E K KN
Sbjct: 1 MSGIIGKKVGMTSIFDAEGKNIPCTVIEAGPCVVTQIRTVENDGYTAIQLAFDEKKEKNT 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+ ++G F+ N +PK+KL EF V ++ L G V + F G +DV G + GKGF
Sbjct: 61 TASLKGHFAKANTTPKRKLVEFEVFPEEKNL--GDVVTVDIFAEGDYIDVVGTSKGKGFQ 118
Query: 122 GAMKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH F G THG R+ GS G P RVFK +MAGR GG+RV V+NL+V+
Sbjct: 119 GVVKRHGFGGVGGQTHGQHNRMRAPGSLGASSWPSRVFKGMRMAGRTGGDRVKVQNLQVL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
V ++ L++V G VPGA K S+++V
Sbjct: 179 KVYPEKNLLVVSGSVPGA-KGSYVIV 203
>gi|199598832|ref|ZP_03212243.1| Ribosomal protein L3 [Lactobacillus rhamnosus HN001]
gi|199590244|gb|EDY98339.1| Ribosomal protein L3 [Lactobacillus rhamnosus HN001]
Length = 210
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 78/213 (36%), Positives = 120/213 (56%), Gaps = 5/213 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ +K+GMT V+ G +PVTV+ + V+ +T++ +GY AVQ+G G+ +
Sbjct: 3 RKGILGKKVGMTQVFTDNGELVPVTVIDVTPNVVMQVKTVESDGYEAVQLGYGDLREVLT 62
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G + +PK+ + E R D VGS F G +VDVTG + G G+
Sbjct: 63 NKPSVGHAKKADTTPKRFVREIRDVALSD-YEVGSEVKADEFAAGDIVDVTGTSKGHGYQ 121
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +K+ HG S HR GS G +VFK KK+ GRMG + T++NL+VV+
Sbjct: 122 GNIKKDGQSRGPMAHG-SRYHRRPGSLGAI--INKVFKGKKLPGRMGNHTRTMQNLQVVA 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
D + ++L+KG VPGA K S++ +R + K+A
Sbjct: 179 ADTEHNVLLIKGNVPGANK-SFVTIRSAVKAAK 210
>gi|325299132|ref|YP_004259049.1| 50S ribosomal protein L3 [Bacteroides salanitronis DSM 18170]
gi|324318685|gb|ADY36576.1| 50S ribosomal protein L3 [Bacteroides salanitronis DSM 18170]
Length = 205
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 79/204 (38%), Positives = 121/204 (59%), Gaps = 4/204 (1%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT V++ +G+ +P TV+ C V ++++K+GY AVQ+G + K K+ +K
Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKSVEKDGYAAVQLGFQDMKEKHTTK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P+ G F V+PK+ L EF+ ++ L +G + F VDV G + GKG+ G
Sbjct: 63 PLMGHFKKAGVTPKRHLAEFKDFSEE--LNLGDTITVELFNDAPYVDVIGTSKGKGYQGV 120
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G + THG R GS G P +VFK +MAG MG +RVT NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMAGHMGCDRVTTHNLQVLKV 180
Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
+ L+L+KG VPG K S +++
Sbjct: 181 IPEHNLLLIKGSVPG-YKGSIVII 203
>gi|325981805|ref|YP_004294207.1| 50S ribosomal protein L3 [Nitrosomonas sp. AL212]
gi|325531324|gb|ADZ26045.1| 50S ribosomal protein L3 [Nitrosomonas sp. AL212]
Length = 215
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 88/216 (40%), Positives = 128/216 (59%), Gaps = 3/216 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GM ++ G PVTV+ + + ++ + NGY A QV G+ K+
Sbjct: 1 MSLGLIGRKIGMMRIFTENGDAFPVTVIDVASNRITQIKKTSSNGYCAAQVSFGQKKISR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
V+KP G + V + EFRV+ D G F VGQ VD++G+TIGK
Sbjct: 61 VNKPTAGHCAKAGVIAGSIIREFRVKDDSILSSFQNGMEIKSDIFKVGQKVDISGITIGK 120
Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
GFSGA+K HNF RA+HG S +H+ GS G QDPGR+F K+MA MG + T++NLE
Sbjct: 121 GFSGAIKLHNFSSNRASHGNSKAHKKTGSIGMAQDPGRIFPGKRMAAHMGNVKRTIQNLE 180
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
++ +D +R L+LVKG +PG+ K+ +++VR S K
Sbjct: 181 ILRIDSERNLLLVKGAIPGS-KDGYVVVRSSVKEKK 215
>gi|225011647|ref|ZP_03702085.1| ribosomal protein L3 [Flavobacteria bacterium MS024-2A]
gi|225004150|gb|EEG42122.1| ribosomal protein L3 [Flavobacteria bacterium MS024-2A]
Length = 205
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 88/208 (42%), Positives = 127/208 (61%), Gaps = 4/208 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT +++ +G+ IP TVL L C V RT +GY A+Q+G + K V
Sbjct: 1 MSGLIGKKIGMTSLFDEKGKNIPCTVLELGPCVVTQVRTTAVDGYEALQLGFDDKAEKKV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+K G F N PKKKL EF+ ++ L +G + +F G+ VDV+G + GKGF
Sbjct: 61 TKAAAGHFKKANSVPKKKLVEFQ--NFEEELNLGDTITVEHFNEGEFVDVSGTSKGKGFQ 118
Query: 122 GAMKRHNFG-GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH F +ATHG R+ GS G P RVFK +MAG+MG +V V+NL VV
Sbjct: 119 GVVKRHGFAGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGQMGNVKVKVQNLRVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
V ++ L++VKGCVPG KN++++V+
Sbjct: 179 KVVPEKNLLVVKGCVPG-HKNAYVIVQK 205
>gi|156743948|ref|YP_001434077.1| 50S ribosomal protein L3 [Roseiflexus castenholzii DSM 13941]
gi|189029477|sp|A7NR63|RL3_ROSCS RecName: Full=50S ribosomal protein L3
gi|156235276|gb|ABU60059.1| ribosomal protein L3 [Roseiflexus castenholzii DSM 13941]
Length = 210
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 89/213 (41%), Positives = 125/213 (58%), Gaps = 3/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V++ G+ IPVT++ + C V RT +++GY AVQ+G E + K+
Sbjct: 1 MIEGLLGRKIGMTQVFDPTGQVIPVTIIEVGPCVVTQIRTKERDGYEAVQIGYQEVRAKS 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP +G + + VG V + F GQ VDV G + G+GF
Sbjct: 61 LTKPEQGHLRGAGK--LLRHLREFRTDNIADHKVGDVLTVEMFAPGQRVDVIGTSKGRGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH FGG THG S R+ GS G DPG ++KN +MAGRMG RVTV+NL VV
Sbjct: 119 QGVVKRHGFGGGPRTHGQSDRLRAPGSIGAGTDPGHLWKNTRMAGRMGNQRVTVQNLTVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
V +R L+LV+G VPGA N ++VR + K +
Sbjct: 179 DVVPERNLLLVRGSVPGA-NNGLVMVRRAIKGS 210
>gi|290581289|ref|YP_003485681.1| 50S ribosomal protein L3 [Streptococcus mutans NN2025]
gi|254998188|dbj|BAH88789.1| 50S ribosomal protein L3 [Streptococcus mutans NN2025]
Length = 208
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 92/214 (42%), Positives = 130/214 (60%), Gaps = 6/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + +
Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EF+ + L VG + F G +VDVTG T GKGF
Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFKNIEG---LEVGQEITVEQFEAGDVVDVTGTTKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH HG S HR GS G P RVFK K +AGRMGGNRVT++NLE+V
Sbjct: 118 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGNRVTIQNLEIV 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V ++ +IL+KG VPGAKK S I+++ + K+A
Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLIIIKSAVKAAK 208
>gi|298491398|ref|YP_003721575.1| 50S ribosomal protein L3 ['Nostoc azollae' 0708]
gi|298233316|gb|ADI64452.1| 50S ribosomal protein L3 ['Nostoc azollae' 0708]
Length = 211
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 82/211 (38%), Positives = 123/211 (58%), Gaps = 3/211 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ KLGMT +++ G IPVTV+ C V +T +GY A+QVG G K K
Sbjct: 1 MSVGILGTKLGMTQIFDEAGVAIPVTVIQAGPCTVTQVKTKQTDGYCAIQVGYGVVKPKV 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+++P+ G + + + L E+R D +G F+ GQ+VDV G +IG+GF
Sbjct: 61 LNRPLLGHLAKSSAPALRHLNEYRTDASGD-YALGQELKADIFSAGQIVDVIGTSIGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G KR++FG +HG S +HR+ GS G PGRV+ K+MAGR+GG RVT++ L +V
Sbjct: 120 AGNQKRNHFGRGPMSHG-SKNHRAPGSIGAGTTPGRVYPGKRMAGRLGGTRVTIRKLTIV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+D R LIL+KG +PG + + + + K
Sbjct: 179 RLDADRNLILIKGAIPGKP-GALVNIVPTNK 208
>gi|188584836|ref|YP_001916381.1| LSU ribosomal protein L3P [Natranaerobius thermophilus JW/NM-WN-LF]
gi|226730540|sp|B2A4D9|RL3_NATTJ RecName: Full=50S ribosomal protein L3
gi|179349523|gb|ACB83793.1| LSU ribosomal protein L3P [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 210
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 90/213 (42%), Positives = 124/213 (58%), Gaps = 4/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++ +K+GMT +++ EG +PVTV+ C VV + D +GY AVQ+G + K
Sbjct: 1 MKKAILGKKVGMTQIFSEEGEVMPVTVVKAGPCSVVQKKVEDTDGYNAVQIGFEDKKENK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
KP +G F V+PKK L EF ++ ++ L VG + F VG +DVTG + KGF
Sbjct: 61 TKKPEKGHFEKAGVNPKKHLTEFELESMEN-LEVGQELTVEQFEVGDQIDVTGTSKSKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR THG S +R+ GS G D RVFK + + GRMGGN VTV+ LEVV
Sbjct: 120 QGTIKRFKHSTGPKTHG-SRFYRAPGSLG-SMDISRVFKGQTLPGRMGGNTVTVQRLEVV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD + L+LVKG VPG KK + + DS K+
Sbjct: 178 DVDKENNLLLVKGAVPGPKKG-LLKIVDSVKAK 209
>gi|188575490|ref|YP_001912419.1| 50S ribosomal protein L3 [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188519942|gb|ACD57887.1| ribosomal protein L3 [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 207
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 90/208 (43%), Positives = 126/208 (60%), Gaps = 2/208 (0%)
Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
+ RK GM+ ++ +GR +PVT++ ++ +T++ +GY AVQ+ G + V+KP
Sbjct: 1 MGRKAGMSRIFTEDGRSVPVTLIEATPNRIAQIKTVEVDGYSAVQITVGARRAALVNKPA 60
Query: 66 RGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
G F+ V + L+EFRV+ VG F VGQ VDV G+T GKGF G +
Sbjct: 61 AGHFAKAKVEAGRGLWEFRVEDAHLGDFAVGGEIKADIFEVGQKVDVQGVTKGKGFQGTI 120
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR+NF ATHG S+SHR+ GS G RQ PGRVF KKM+G MG + + +NLEVV VD
Sbjct: 121 KRYNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVQQSTQNLEVVKVDV 180
Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212
+RGLI + G VPGA ++VR + K+
Sbjct: 181 ERGLIAIHGAVPGAA-GGDVIVRPASKA 207
>gi|158317791|ref|YP_001510299.1| ribosomal protein L3 [Frankia sp. EAN1pec]
gi|226725178|sp|A8LC56|RL3_FRASN RecName: Full=50S ribosomal protein L3
gi|158113196|gb|ABW15393.1| ribosomal protein L3 [Frankia sp. EAN1pec]
Length = 236
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 93/205 (45%), Positives = 122/205 (59%), Gaps = 2/205 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ KLGMT V++ R +PVTV+ V +T D +GY AVQ+G GE + ++K
Sbjct: 8 GLLGTKLGMTQVWDANNRVVPVTVIQAGPNVVTQVKTPDSDGYSAVQLGYGEIDPRRINK 67
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
PMRG F + +P++ L E R D G + F GQ+VDVTG + GKGF+G
Sbjct: 68 PMRGHFETSGATPRRHLVELR-TADAGNYRPGQQLTGEVFDAGQVVDVTGTSKGKGFAGV 126
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
MKRH F GL A HGV HRS GS G PGRVFK +MAGRMG +RVTV L + +VD
Sbjct: 127 MKRHGFKGLGAGHGVERKHRSPGSVGGCATPGRVFKGLRMAGRMGHDRVTVAGLTIHAVD 186
Query: 184 DKRGLILVKGCVPGAKKNSWILVRD 208
+RG +L+KG +PG + VR
Sbjct: 187 TERGFLLIKGAIPGPD-GGLVFVRS 210
>gi|70725803|ref|YP_252717.1| 50S ribosomal protein L3 [Staphylococcus haemolyticus JCSC1435]
gi|82581592|sp|Q4L8B4|RL3_STAHJ RecName: Full=50S ribosomal protein L3
gi|68446527|dbj|BAE04111.1| 50S ribosomal protein L3 [Staphylococcus haemolyticus JCSC1435]
Length = 220
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 92/223 (41%), Positives = 122/223 (54%), Gaps = 11/223 (4%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEA---- 56
M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+QVG +
Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKKAYK 60
Query: 57 ----KVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
K +KP G +PK+ + EFR D+ VG + F G ++DVT
Sbjct: 61 KDAKSNKYANKPAEGHAKKAGAAPKRFIREFRNVNVDE-YEVGQEVTVDTFEAGDIIDVT 119
Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
G + GKGF GA+KRH HG S HR+ GS G D RVFK +KM GRMGGN V
Sbjct: 120 GTSKGKGFQGAIKRHGQARGPMAHG-SHFHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178
Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
TV+NLEVV VD + +ILVKG VPG KK ++ ++ S K
Sbjct: 179 TVQNLEVVQVDTENNVILVKGNVPGPKKG-FVEIQTSIKKGNK 220
>gi|219666490|ref|YP_002456925.1| 50S ribosomal protein L3 [Desulfitobacterium hafniense DCB-2]
gi|219536750|gb|ACL18489.1| ribosomal protein L3 [Desulfitobacterium hafniense DCB-2]
Length = 209
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 87/213 (40%), Positives = 124/213 (58%), Gaps = 4/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT V+ EG IPVTV+ C V+ +T +GY A+QVG G + +
Sbjct: 1 MSKGILGKKVGMTQVFTEEGHLIPVTVVEAGPCYVIQKKTKATDGYNAIQVGFGALRERL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + +V P + + EFRV D +G + F G VDV G++ GKGF
Sbjct: 61 ANKPQKGHVAKASVKPMRYIREFRVDDVDA-YEIGQEITAEVFAAGDAVDVVGISKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KRH G HG R+ + P RVFK + + GRMGG RVTV+NL+VV
Sbjct: 120 AGMIKRHGAGRGPMKHGSKYHRRTGSLGA--KGPARVFKGRNLPGRMGGERVTVQNLKVV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD + +ILVKG VPGAKK S ++++ S K+
Sbjct: 178 RVDADKNMILVKGAVPGAKK-SLLILKPSVKAK 209
>gi|328951236|ref|YP_004368571.1| 50S ribosomal protein L3 [Marinithermus hydrothermalis DSM 14884]
gi|328451560|gb|AEB12461.1| 50S ribosomal protein L3 [Marinithermus hydrothermalis DSM 14884]
Length = 206
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 97/213 (45%), Positives = 128/213 (60%), Gaps = 7/213 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ K+GMT ++ + R IPVTV+ C VV RT++K+GY AVQ+G K + V
Sbjct: 1 MKGILGAKIGMTQIWKDD-RAIPVTVILAGPCPVVQRRTVEKDGYEAVQLGFLPQKPQRV 59
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KPM+G F V P + L E R + G V + S F G+ VDVTG++ G+GF+
Sbjct: 60 NKPMKGHFEKAGVEPVRYLREIRGFNPE-----GDVVTVSIFQPGERVDVTGISKGRGFT 114
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR F G +HG HR GS G R+ PGRV+K KKMAGR G RVTV+NLEVV
Sbjct: 115 GVMKRWGFAGGPDSHGAHRIHRHPGSIGQRKTPGRVYKGKKMAGRYGAERVTVQNLEVVD 174
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V + LILVKG VPG +++R+S K A
Sbjct: 175 VIAEENLILVKGAVPGP-NGGLVILRESVKGAK 206
>gi|119501322|ref|XP_001267418.1| 50S ribosomal protein L3 [Neosartorya fischeri NRRL 181]
gi|119415583|gb|EAW25521.1| 50S ribosomal protein L3 [Neosartorya fischeri NRRL 181]
Length = 297
Score = 205 bits (522), Expect = 4e-51, Method: Composition-based stats.
Identities = 101/217 (46%), Positives = 136/217 (62%), Gaps = 3/217 (1%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
+R+G +A K GMT VY+ G+RI TVL LD QVV H+T +GY AVQVGAG
Sbjct: 72 LRTGAIAIKKGMTAVYDAETGKRIACTVLQLDRVQVVSHKTRQTHGYNAVQVGAGWKHPS 131
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
NV+K + G FS+ VSPK+ ++EFRV+ + LLPVG + +F GQ VD + GKG
Sbjct: 132 NVTKSLLGHFSTNGVSPKRHIYEFRVKDESGLLPVGQTINADWFQEGQYVDARSNSKGKG 191
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ-DPGRVFKNKKMAGRMGGNRVTVKNLE 178
F+G MKRH F G +HGVS++HRS GS G Q RV+ KKMAG MG + TV+NL+
Sbjct: 192 FAGVMKRHGFHGQDRSHGVSLTHRSLGSAGPSQGGGSRVYPGKKMAGNMGNEQNTVQNLK 251
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
V+ VD + G+++V G V G K + ++D+ K
Sbjct: 252 VLKVDAENGIVVVNGSVSGP-KGCVVRIQDAIKKPWP 287
>gi|213962845|ref|ZP_03391105.1| 50S ribosomal protein L3 [Capnocytophaga sputigena Capno]
gi|213954502|gb|EEB65824.1| 50S ribosomal protein L3 [Capnocytophaga sputigena Capno]
Length = 225
Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 81/208 (38%), Positives = 126/208 (60%), Gaps = 4/208 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT +++ G+ IP T++ C V RT + +GY A+Q+G + K
Sbjct: 21 MSGLIGKKVGMTSIFDENGKNIPCTIIEAGPCVVTQVRTKEVDGYDALQLGFDDKAEKRA 80
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+K G F S KKK+ EF+ +D+ +G + +FT G+ VD+TG++ GKGF
Sbjct: 81 TKAELGHFKKAGTSVKKKVVEFQGFEDN--YKLGDTITVDFFTEGEFVDITGVSKGKGFQ 138
Query: 122 GAMKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G ++RH F G + THG R+ GS G P RVFK +MAGRMG +VTV+NL+V+
Sbjct: 139 GVVRRHGFGGVGQTTHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGAEKVTVQNLKVL 198
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
V ++ L++VKGC+PG KN+++ +
Sbjct: 199 KVVAEKNLLVVKGCIPG-HKNAYVTIHK 225
>gi|299065415|emb|CBJ36584.1| 50S ribosomal subunit protein L3 [Ralstonia solanacearum CMR15]
Length = 209
Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 86/203 (42%), Positives = 120/203 (59%), Gaps = 2/203 (0%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
MT V+ +G IPVTVL + +V +T + +GY AVQV G + V+KP+ G +
Sbjct: 1 MTRVFTDDGDSIPVTVLEVGGNRVTQIKTDETDGYTAVQVTFGTRRASRVTKPLAGHLAK 60
Query: 72 VNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130
V + + EFR+ L +G F+VGQ +DV G TIGKG++G +KR++F
Sbjct: 61 AGVEAGEIIVEFRIDATKAAELKLGDTIDVDLFSVGQKIDVQGTTIGKGYAGTIKRYHFS 120
Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190
RA+HG S SH GS G QDPGRVF K+M G MG TV+NL +V VD +R L+
Sbjct: 121 SGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDVTRTVQNLVIVRVDAERKLLF 180
Query: 191 VKGCVPGAKKNSWILVRDSFKSA 213
VKG VPGA K+ +++V + K+
Sbjct: 181 VKGAVPGA-KSGFVVVSPAVKAK 202
>gi|88803750|ref|ZP_01119274.1| 50S ribosomal protein L3 [Polaribacter irgensii 23-P]
gi|88780483|gb|EAR11664.1| 50S ribosomal protein L3 [Polaribacter irgensii 23-P]
Length = 205
Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 81/208 (38%), Positives = 128/208 (61%), Gaps = 4/208 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ RK+GMT +++ G+ IP TV+ C V RT++ +GY A+Q+G + K+
Sbjct: 1 MSGLIGRKIGMTSLFDENGKNIPCTVIEAGPCVVTQVRTIEVDGYSALQLGFDDKTAKSS 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+K + G F KKK+ EF+ ++ + +G S ++F G+ VDV+G++ GKGF
Sbjct: 61 NKALDGHFKKAGSVAKKKVVEFQGFEE--VYKLGDSISVAHFEEGEFVDVSGVSKGKGFQ 118
Query: 122 GAMKRHNFG-GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH F +ATHG R+ GS G P RVFK +MAGRMGG++V V+NL V+
Sbjct: 119 GVVKRHGFAGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGRMGGDKVKVQNLRVL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
V ++ L++VKG +PG KN+++ ++
Sbjct: 179 KVVAEKNLLVVKGAIPG-HKNAFVTIQK 205
>gi|170077685|ref|YP_001734323.1| 50S ribosomal protein L3 [Synechococcus sp. PCC 7002]
gi|226730579|sp|B1XJT9|RL3_SYNP2 RecName: Full=50S ribosomal protein L3
gi|169885354|gb|ACA99067.1| ribosomal protein L3 [Synechococcus sp. PCC 7002]
Length = 213
Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 88/202 (43%), Positives = 126/202 (62%), Gaps = 3/202 (1%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
M G++ KLGMT +++ G IPVTV+ C V +T + +GY +VQ+G G+ K K
Sbjct: 1 MSLGILGTKLGMTQIFDNETGTAIPVTVVQAGPCTVTQIKTSETDGYTSVQIGYGDVKEK 60
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
N++KP G + +P + L E+R+ D +G + + F GQ+VDV+G TIG+G
Sbjct: 61 NLTKPQLGHLKKADAAPLRHLKEYRLD-DVSGYELGQAITANIFEAGQVVDVSGNTIGRG 119
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G KRHNF THG S +HR GSTG PGRV+ K+MAGR GG ++TV+ LEV
Sbjct: 120 FAGYQKRHNFKRGNMTHG-SKNHRLPGSTGAGTTPGRVYPGKRMAGRYGGTKITVRKLEV 178
Query: 180 VSVDDKRGLILVKGCVPGAKKN 201
V VD+++ L+L+KG +PG N
Sbjct: 179 VRVDEEKNLLLIKGAIPGKAGN 200
>gi|111220546|ref|YP_711340.1| 50S ribosomal protein L3 [Frankia alni ACN14a]
gi|123339021|sp|Q0RRS1|RL3_FRAAA RecName: Full=50S ribosomal protein L3
gi|111148078|emb|CAJ59746.1| 50S ribosomal subunit protein L3 [Frankia alni ACN14a]
Length = 234
Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 92/209 (44%), Positives = 121/209 (57%), Gaps = 2/209 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ KLGMT V++ R +PVTV+ V +T D +GY AVQ+G GE + ++K
Sbjct: 8 GLLGTKLGMTQVWDANNRVVPVTVIKAGPNVVTQVKTPDSDGYSAVQLGYGEIDPRKINK 67
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P RG F++ V+P++ L E R D G + F G +VDVTG + GKGF+G
Sbjct: 68 PARGHFATSGVTPRRHLVELR-TADAGNYRPGQELTGEVFAEGTVVDVTGTSKGKGFAGV 126
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
MKRH F GL A HGV HRS GS G PGRVFK +MAGRMG R T L + +VD
Sbjct: 127 MKRHGFKGLGAGHGVERKHRSPGSVGGCATPGRVFKGLRMAGRMGHARTTTPGLTIHAVD 186
Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+RG +LVKG +PG + VR + K
Sbjct: 187 TERGFLLVKGAIPGPD-GGLVFVRSAAKR 214
>gi|322390660|ref|ZP_08064174.1| 50S ribosomal protein L3 [Streptococcus parasanguinis ATCC 903]
gi|321142633|gb|EFX38097.1| 50S ribosomal protein L3 [Streptococcus parasanguinis ATCC 903]
Length = 208
Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 88/214 (41%), Positives = 127/214 (59%), Gaps = 6/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY A+QVG + +
Sbjct: 1 MTKGILGKKVGMTQIFTEAGELIPVTVIEATPNVVLQVKTVETDGYNAIQVGFDDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + E K+ + L VG + F G +VDVTG + GKGF
Sbjct: 61 SNKPAKGHVAKANTAPKRFIRE---FKNVEGLEVGDEITVDTFEAGDIVDVTGTSKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFK K +AGRMGG+RVT++NLEVV
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGDRVTIQNLEVV 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V ++ +IL+KG VPGAKK S I ++ + K+
Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKAGK 208
>gi|229552708|ref|ZP_04441433.1| ribosomal protein L3 [Lactobacillus rhamnosus LMS2-1]
gi|258509482|ref|YP_003172233.1| 50S ribosomal protein L3 [Lactobacillus rhamnosus GG]
gi|258540679|ref|YP_003175178.1| 50S ribosomal protein L3 [Lactobacillus rhamnosus Lc 705]
gi|229313914|gb|EEN79887.1| ribosomal protein L3 [Lactobacillus rhamnosus LMS2-1]
gi|257149409|emb|CAR88382.1| LSU/50S ribosomal protein L3P [Lactobacillus rhamnosus GG]
gi|257152355|emb|CAR91327.1| LSU/50S ribosomal protein L3P [Lactobacillus rhamnosus Lc 705]
gi|259650761|dbj|BAI42923.1| 50S ribosomal protein L3 [Lactobacillus rhamnosus GG]
Length = 210
Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 78/213 (36%), Positives = 120/213 (56%), Gaps = 5/213 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ +K+GMT V+ G +PVTV+ + V+ +T++ +GY AVQ+G G+ +
Sbjct: 3 RKGILGKKVGMTQVFTDNGELVPVTVIDVTPNVVMQVKTVESDGYEAVQLGYGDMREVLT 62
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G + +PK+ + E R D VGS F G +VDVTG + G G+
Sbjct: 63 NKPSVGHAKKADTTPKRFVREIRDVALSD-YEVGSEVKADEFAAGDIVDVTGTSKGHGYQ 121
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +K+ HG S HR GS G +VFK KK+ GRMG + T++NL+VV+
Sbjct: 122 GNIKKDGQSRGPMAHG-SRYHRRPGSLGAI--INKVFKGKKLPGRMGNHTRTMQNLQVVA 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
D + ++L+KG VPGA K S++ +R + K+A
Sbjct: 179 ADTEHNVLLIKGNVPGANK-SFVTIRSAVKAAK 210
>gi|167752385|ref|ZP_02424512.1| hypothetical protein ALIPUT_00629 [Alistipes putredinis DSM 17216]
gi|167660626|gb|EDS04756.1| hypothetical protein ALIPUT_00629 [Alistipes putredinis DSM 17216]
Length = 204
Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 81/206 (39%), Positives = 119/206 (57%), Gaps = 5/206 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT VY+ EG+ IP TV+ C V RT++K+ Y AVQ+ + K+
Sbjct: 1 MSGLIGKKIGMTSVYSAEGKNIPCTVIEAGPCVVTQIRTVEKDSYEAVQIAYDDKSEKHT 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+ + G F +PK+K+ EF+ + +L G + F+ VDVTG++ GKGF
Sbjct: 61 TGSLLGHFKKAGTTPKRKMAEFKDMPEVNL---GDTLTVDMFSEEDWVDVTGISKGKGFQ 117
Query: 122 GAMKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH F G THG R GS G P RVF K++ GRMGG +V V NL+V+
Sbjct: 118 GVVKRHGFGGVGGQTHGQHNRQRKPGSLGASSYPSRVFPGKRLPGRMGGEQVKVLNLKVL 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
+ + LILVKG +PGA K +++ +
Sbjct: 178 KIIPENNLILVKGSIPGA-KGAYLTI 202
>gi|87124962|ref|ZP_01080809.1| 50S ribosomal protein L3 [Synechococcus sp. RS9917]
gi|86167282|gb|EAQ68542.1| 50S ribosomal protein L3 [Synechococcus sp. RS9917]
Length = 218
Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 79/216 (36%), Positives = 128/216 (59%), Gaps = 3/216 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGM+ +++ +G+ +PVT++ C++ +T + +GY AVQ+G G+ + K
Sbjct: 1 MSIGILGKKLGMSQLFDEQGKAVPVTLIEAGPCRITQLKTTETDGYAAVQIGFGDTREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP +G + + L E+RV D L +G + F GQ VDV+G ++G+GF
Sbjct: 61 VNKPAKGHLAKSGEELLRHLSEYRVD-DVAGLELGGAITVGDFEAGQKVDVSGDSMGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G KRH F THG S +HR GSTG PGR++ K+MAGR GG ++T + L ++
Sbjct: 120 AGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKITTRGLTIL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
+D +R L++VKG VPG S + +R + +
Sbjct: 179 KIDSERNLLVVKGSVPGKP-GSLLNIRPANRVGAKP 213
>gi|300174031|ref|YP_003773197.1| 50S ribosomal protein L3 [Leuconostoc gasicomitatum LMG 18811]
gi|299888410|emb|CBL92378.1| 50S ribosomal protein L3 [Leuconostoc gasicomitatum LMG 18811]
Length = 227
Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 78/219 (35%), Positives = 117/219 (53%), Gaps = 8/219 (3%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ G I VTV+ V+ + + +GY A+Q+G + +
Sbjct: 1 MTKGILGRKVGMTQVFTEIGELIAVTVVEATPNVVLQVKNAETDGYSALQLGYQDKRTVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G S N +PK+ + E ++ + G F G+ VDVTG+T G GF
Sbjct: 61 SNKPEQGHASKANTTPKRYVRE--IRNAEGEFNAGDEIKVDTFEAGEYVDVTGITKGHGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +K+ +HG S HR GS G RVFK K + GRMG ++ T++N+ +V
Sbjct: 119 QGNIKKDGQSRGPMSHG-SRFHRRPGSMGAV--INRVFKGKLLPGRMGNHKRTMQNVAIV 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
VD + L+L+KG VPGA K S + V+ + K VN K
Sbjct: 176 HVDVENNLLLLKGNVPGANK-SLLTVKSTVK--VNAKHP 211
>gi|329114217|ref|ZP_08242979.1| 50S ribosomal protein L3 [Acetobacter pomorum DM001]
gi|326696293|gb|EGE47972.1| 50S ribosomal protein L3 [Acetobacter pomorum DM001]
Length = 238
Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 128/219 (58%), Positives = 165/219 (75%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+G++A+KLGM+ ++ +G +PVTVLH+D+ QVV R +++GY+AVQ+G G+AKVKN
Sbjct: 12 MRTGLIAKKLGMSRLFKEDGTHVPVTVLHVDDVQVVDVRNQERDGYVAVQLGMGKAKVKN 71
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP RG F+ V PK+ L EFRV DD L VG+ S S+F VGQ VDVTG++ GKGF
Sbjct: 72 VTKPNRGHFARTKVEPKQALREFRV-ADDAALEVGATLSASHFVVGQKVDVTGVSKGKGF 130
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKR NF GL ATHGVSISHRSHGSTG RQDPG+ FKNKKMAG +G RVT NLE+
Sbjct: 131 AGAMKRWNFAGLEATHGVSISHRSHGSTGNRQDPGKTFKNKKMAGHLGDERVTTLNLEIA 190
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
+VD ++ LI+V+G VPGA KN +L+RD+ K A +
Sbjct: 191 AVDPEKNLIMVRGSVPGA-KNGVVLIRDAIKKARHDDAP 228
>gi|291549416|emb|CBL25678.1| LSU ribosomal protein L3P [Ruminococcus torques L2-14]
Length = 227
Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 91/229 (39%), Positives = 127/229 (55%), Gaps = 20/229 (8%)
Query: 1 MRSGVVARKLGMTCVYNI-EGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
M+ ++A K+GMT ++N +G IPVTVL C V +T++ +GY AVQVG + K K
Sbjct: 1 MKKAILATKVGMTQIFNEEDGVLIPVTVLQAGPCVVTQVKTVENDGYSAVQVGYVDKKEK 60
Query: 60 NVSKPM----------------RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103
V+K +G F VS K+ + EFR ++ + + F
Sbjct: 61 IVTKDNSGKKSIAHRNGVTKAEKGHFDKAGVSGKRYVKEFR-FENAEEYTLAQEIKADIF 119
Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163
G +D T ++ GKGF GA+KRHN THG S HR GS G DP +VFK KKM
Sbjct: 120 AAGDKIDATAVSKGKGFQGAIKRHNQSRGPMTHG-SKFHRHAGSNGSASDPSKVFKGKKM 178
Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
G+MG ++TV+NLEVV VD + LILVKG VPG KK + ++++ K+
Sbjct: 179 PGQMGNKKITVQNLEVVRVDAENNLILVKGSVPGPKK-CLVTIKETVKA 226
>gi|302769378|ref|XP_002968108.1| hypothetical protein SELMODRAFT_145395 [Selaginella moellendorffii]
gi|300163752|gb|EFJ30362.1| hypothetical protein SELMODRAFT_145395 [Selaginella moellendorffii]
Length = 255
Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats.
Identities = 109/212 (51%), Positives = 147/212 (69%), Gaps = 2/212 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+G++A K GMT V++ GRRIP+TVL D+ QVV +T+D G+ A+QVG G+ K K +
Sbjct: 7 RTGLIAVKCGMTAVWDKWGRRIPITVLWADDNQVVQVKTVDHEGFNALQVGCGQKKPKQL 66
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
S P G F S V K+KL EF+V + D LLPVG+ + +F GQ +DVTG++IGKGF
Sbjct: 67 SIPELGHFRSKGVPIKRKLKEFQVSE-DALLPVGTALTVRHFVPGQFLDVTGVSIGKGFQ 125
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR F G+ A+HG S+SHRSHG+TG R+ PG+VFKNKKMAG+MG + TV + V
Sbjct: 126 GPMKRWGFAGMPASHGASLSHRSHGATGGRKSPGKVFKNKKMAGQMGNRKATVFCVWVYK 185
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
V+ +R LI VKG VPG K +++ +RDS+
Sbjct: 186 VEPQRDLIWVKGQVPGC-KGNFVYIRDSWNKP 216
>gi|227431341|ref|ZP_03913394.1| ribosomal protein L3 [Leuconostoc mesenteroides subsp. cremoris
ATCC 19254]
gi|227352934|gb|EEJ43107.1| ribosomal protein L3 [Leuconostoc mesenteroides subsp. cremoris
ATCC 19254]
Length = 228
Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats.
Identities = 84/219 (38%), Positives = 119/219 (54%), Gaps = 8/219 (3%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ G I VT + V+ + + +GY A+Q+G + +
Sbjct: 1 MTKGILGRKVGMTQVFTESGELIAVTAVEATPNVVLQVKNAETDGYGAIQLGYQDKRTVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G S N +PK+ + E ++ D VG F G+ VDVTG+T G GF
Sbjct: 61 SNKPEQGHASKANTAPKRYVRE--IRNAGDEFNVGDEIKVDTFQAGEYVDVTGITKGHGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KR THG S HR GS G RVFK K + GRMG N+ T++N+ VV
Sbjct: 119 QGAIKRLGQSRGPMTHG-SRYHRRPGSMGAI--INRVFKGKLLPGRMGNNKRTMQNIAVV 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
VD ++ L+L+KG VPGA K S + V+ + K VN K
Sbjct: 176 HVDVEKNLLLLKGNVPGANK-SLLTVKSTVK--VNAKHP 211
>gi|317501774|ref|ZP_07959960.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 8_1_57FAA]
gi|331088705|ref|ZP_08337615.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 3_1_46FAA]
gi|316896807|gb|EFV18892.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 8_1_57FAA]
gi|330407228|gb|EGG86731.1| 50S ribosomal protein L3 [Lachnospiraceae bacterium 3_1_46FAA]
Length = 227
Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats.
Identities = 88/229 (38%), Positives = 124/229 (54%), Gaps = 20/229 (8%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
M+ ++A K+GMT ++N +G IPVTVL C V +T++ +GY AVQVG + K K
Sbjct: 1 MKKAILATKVGMTQIFNHEDGVLIPVTVLQAGPCVVTQVKTVENDGYSAVQVGYVDKKDK 60
Query: 60 NVSKP----------------MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103
V+K +G F VS K+ + EFR ++ + F
Sbjct: 61 IVTKDGSGRKAIAHRNGVTKAEKGHFDKAGVSGKRYVKEFRFDNAEE-YALAQEIKADIF 119
Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163
G +D T ++ GKGF GA+KRH THG S HR GS G DP +VFK KKM
Sbjct: 120 AEGDHIDATAISKGKGFQGAIKRHGQSRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKM 178
Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
G+MG ++TV+NLE+V VD + L+LVKG VPG KK + ++++ K
Sbjct: 179 PGQMGNKKITVQNLEIVRVDAENNLLLVKGSVPGPKK-CLVTIKETVKG 226
>gi|302662377|ref|XP_003022845.1| hypothetical protein TRV_03069 [Trichophyton verrucosum HKI 0517]
gi|291186810|gb|EFE42227.1| hypothetical protein TRV_03069 [Trichophyton verrucosum HKI 0517]
Length = 304
Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats.
Identities = 100/217 (46%), Positives = 143/217 (65%), Gaps = 3/217 (1%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
+R+G +A K GMT +Y+ G R P TVL LD QV+ H+T +KNGY AVQVG+G +
Sbjct: 77 LRTGALAIKKGMTAIYDPETGVRTPCTVLQLDGAQVISHKTFEKNGYCAVQVGSGLKSER 136
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
NV++PM G FS+ VSPK+ + EFRV+ + LLP+G V + +F GQ VDV + G G
Sbjct: 137 NVTRPMLGHFSANGVSPKRHIHEFRVKDETGLLPIGEVINADWFQEGQYVDVRSNSRGMG 196
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ-DPGRVFKNKKMAGRMGGNRVTVKNLE 178
F+GAMK+ F G +HGVS++HRS GST Q RV+ KKM GRMG ++VT+++L+
Sbjct: 197 FAGAMKKWGFHGQDRSHGVSLTHRSLGSTAPSQGGGSRVYPGKKMPGRMGNHQVTLQSLK 256
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
V+ VD ++G+++VKG V G K + ++D+ K
Sbjct: 257 VLKVDAEKGIVVVKGGVAGP-KGRCVKIQDAIKKPWP 292
>gi|253701922|ref|YP_003023111.1| 50S ribosomal protein L3 [Geobacter sp. M21]
gi|259646547|sp|C6E4Q7|RL3_GEOSM RecName: Full=50S ribosomal protein L3
gi|251776772|gb|ACT19353.1| ribosomal protein L3 [Geobacter sp. M21]
Length = 211
Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats.
Identities = 89/214 (41%), Positives = 123/214 (57%), Gaps = 3/214 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGMT ++ +GRRI VTV+ C VV +++ K+GY A+QVG G
Sbjct: 1 MNKGLIGKKLGMTQIFAEDGRRIAVTVVEAGPCVVVQKKSVAKDGYSAIQVGLGAKDASR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+ G E R+ D +G V + F G LVDVTG +IGKGF
Sbjct: 61 ANAAQIGHCKGAGAGVFTHYRELRMDNTDA-YNLGDVIEAAVFEEGDLVDVTGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR F G R++HG S HR+ GS GC P RVFKNKKM G++G +VTV+ L+VV
Sbjct: 120 AGVIKRWGFKGGRSSHG-SRFHRAPGSIGCSATPSRVFKNKKMPGQLGNEKVTVQRLKVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VD LIL+ G +PG+ N +L++DS K+
Sbjct: 179 RVDAADNLILLGGAIPGSA-NGVVLIKDSVKAKK 211
>gi|163815975|ref|ZP_02207345.1| hypothetical protein COPEUT_02155 [Coprococcus eutactus ATCC 27759]
gi|158448785|gb|EDP25780.1| hypothetical protein COPEUT_02155 [Coprococcus eutactus ATCC 27759]
Length = 227
Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats.
Identities = 87/230 (37%), Positives = 124/230 (53%), Gaps = 19/230 (8%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++A+K+GMT +++ G PVTVL C V +T++ +GY A+QVG GE K +
Sbjct: 1 MKKAILAKKVGMTQIFDENGVLTPVTVLQAGPCVVTQIKTVENDGYDAIQVGFGEKKERV 60
Query: 61 VSKP----------------MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
+K G +PK EFR++ + +G+ F
Sbjct: 61 TTKDVSGKKVIRNPHGAGKAEVGHAKKAGTTPKTFYREFRLENTAE-YELGAEIKADVFA 119
Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
G +DVT + GKG++G +KRH + HG S HR GS G PGRVFK KKM
Sbjct: 120 AGDKIDVTAKSKGKGYAGGLKRHGLKSGPSGHG-SKYHRHAGSNGSATTPGRVFKGKKMP 178
Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
G MG RVT++NLEVV +D + +ILVKG VPG KK S ++++D+ KS
Sbjct: 179 GHMGNVRVTIQNLEVVKIDVENNVILVKGAVPGPKK-SLVMIKDTVKSGK 227
>gi|302379782|ref|ZP_07268266.1| 50S ribosomal protein L3 [Finegoldia magna ACS-171-V-Col3]
gi|302312370|gb|EFK94367.1| 50S ribosomal protein L3 [Finegoldia magna ACS-171-V-Col3]
Length = 209
Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats.
Identities = 90/209 (43%), Positives = 128/209 (61%), Gaps = 3/209 (1%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ +K+GMT ++N +G +PVTV+ V +T +K GY A+QVG E K K+V++P
Sbjct: 4 ILGKKIGMTQIFNEDGSVVPVTVIEAGPMVVTQIKTKEKEGYNAIQVGYIEKKEKHVNQP 63
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
MRG F VS KK L EF++ DD+ +G F G +VDV G++ GKG GA+
Sbjct: 64 MRGHFGKAGVSFKKHLREFKI-NDDEQFNLGDEIKLDIFQDGDVVDVIGISKGKGTQGAI 122
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
RHN+ HG S SHR G+ P RVFK +K G+MG +RVTV+NL++V VD+
Sbjct: 123 VRHNYSRGPMGHG-SKSHRVAGARSAGSYPARVFKGRKGFGKMGHDRVTVQNLKIVKVDN 181
Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+R L+L+KG VPG K + VR++ KS
Sbjct: 182 ERNLLLIKGAVPG-NKGGVVTVREAIKSK 209
>gi|331214855|ref|XP_003320108.1| 50S ribosomal protein L3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309299098|gb|EFP75689.1| 50S ribosomal protein L3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 367
Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats.
Identities = 95/212 (44%), Positives = 134/212 (63%), Gaps = 2/212 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN- 60
R+GV+ARK GMT ++ +G RIPVTVL L++ QVV H+ +++ Y A+Q+G + +N
Sbjct: 96 RTGVLARKRGMTSFWDSDGIRIPVTVLELEDVQVVGHKYKERDNYDAIQIGCTDKFSRNS 155
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+ ++ ++++PK+K+ EF V P+G+ S ++F GQ VDV + GKGF
Sbjct: 156 IHNAQLKYYKHLDLTPKQKVTEFVVSNHQCFSPIGTSISAAHFVPGQFVDVKSNSKGKGF 215
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR F G A+HG + HR GSTG QDPGRV+ KKMAGRMG VTV+NL V
Sbjct: 216 AGVMKRWGFSGGNASHGSTKHHRKAGSTGQHQDPGRVWPGKKMAGRMGNQPVTVRNLLVA 275
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+D LI VKG VPG KK +++ V D+ K
Sbjct: 276 RIDTDMNLIYVKGQVPGPKK-AFVRVTDAEKG 306
>gi|149279664|ref|ZP_01885793.1| 50S ribosomal protein L3 [Pedobacter sp. BAL39]
gi|149229700|gb|EDM35090.1| 50S ribosomal protein L3 [Pedobacter sp. BAL39]
Length = 205
Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats.
Identities = 87/206 (42%), Positives = 131/206 (63%), Gaps = 4/206 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT +++ +G+ IP TV+ C V +T +K+GY++VQ+G EAK KN
Sbjct: 1 MSGIIGKKVGMTSIFDADGKNIPCTVIEAGPCVVTQVKTEEKDGYVSVQLGFDEAKEKNT 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
++P++G F+ N +PK+KL EF ++ L +G+ + F G VDV G + GKGF
Sbjct: 61 TQPLKGHFAKANTTPKRKLVEF--DPFEEPLELGATVTVDIFNEGDFVDVVGTSKGKGFQ 118
Query: 122 GAMKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH F G THG R+ GS G P RVFK +MAGRMGG+RV ++NL+V+
Sbjct: 119 GVVKRHGFGGVGGQTHGQHNRMRAPGSLGAASYPARVFKGMRMAGRMGGDRVKIQNLQVL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
V + L++V G VPGA K S++++
Sbjct: 179 KVYADKNLVVVSGSVPGA-KGSYVIL 203
>gi|241204165|ref|YP_002975261.1| 50S ribosomal protein L3 [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240858055|gb|ACS55722.1| ribosomal protein L3 [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 213
Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats.
Identities = 144/215 (66%), Positives = 171/215 (79%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT VYN G +PVTVL ++ QVV RT++KNGY AVQ+GAG+AKVKN
Sbjct: 1 MRSGVIAQKVGMTRVYNDAGEHVPVTVLRMEAVQVVATRTVEKNGYTAVQLGAGQAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SK MRG F+ NV PK K+ EFRV + D+LL +G+ +F GQLVDVTG TIGKGF
Sbjct: 61 TSKAMRGNFAIANVEPKAKVTEFRVSE-DNLLEIGTEIKAGHFAAGQLVDVTGTTIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKRH FGGLRATHGVS+SHRSHGSTG RQDPG+VFKNKKMAG MG RVT +NLEVV
Sbjct: 120 AGAMKRHGFGGLRATHGVSVSHRSHGSTGSRQDPGKVFKNKKMAGHMGQTRVTTQNLEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
S D+ RGLIL+KG VPG+ K +WI+VRD+ KSA
Sbjct: 180 STDEDRGLILIKGAVPGS-KGAWIIVRDAVKSAAK 213
>gi|225010517|ref|ZP_03700988.1| ribosomal protein L3 [Flavobacteria bacterium MS024-3C]
gi|225005346|gb|EEG43297.1| ribosomal protein L3 [Flavobacteria bacterium MS024-3C]
Length = 205
Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats.
Identities = 84/206 (40%), Positives = 120/206 (58%), Gaps = 4/206 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ RK+GMT +++ G+ IP TV+ C V RT + +GY A+Q+G + K+V
Sbjct: 1 MSGLIGRKIGMTSIFDENGKNIPCTVIETGPCTVTQVRTEEVDGYNALQLGFDDKAEKHV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+K G F VS K+K+ EFR + D +G F G+ VD+ + GKGF
Sbjct: 61 TKAAAGHFKKAGVSAKRKVVEFRDFEGD--YKLGDTIGVDLFVEGEFVDIAANSKGKGFQ 118
Query: 122 GAMKRHNFG-GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH F +ATHG R+ GS G P RVFK KMAGRMGG RV+ NL ++
Sbjct: 119 GVVKRHGFAGVGQATHGQHNRLRAPGSIGAASYPARVFKGMKMAGRMGGVRVSALNLRIL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
V ++ L++VKGCVPG KN+++ +
Sbjct: 179 KVVPEKNLLVVKGCVPG-HKNAYVTI 203
>gi|224283709|ref|ZP_03647031.1| Ribosomal protein L3 [Bifidobacterium bifidum NCIMB 41171]
gi|310288024|ref|YP_003939283.1| 50S ribosomal protein L3 [Bifidobacterium bifidum S17]
gi|311064897|ref|YP_003971623.1| 50S ribosomal protein L3 RplC [Bifidobacterium bifidum PRL2010]
gi|313140865|ref|ZP_07803058.1| 50S ribosomal protein L3 [Bifidobacterium bifidum NCIMB 41171]
gi|309251961|gb|ADO53709.1| 50S ribosomal protein L3 [Bifidobacterium bifidum S17]
gi|310867217|gb|ADP36586.1| RplC 50S ribosomal protein L3 [Bifidobacterium bifidum PRL2010]
gi|313133375|gb|EFR50992.1| 50S ribosomal protein L3 [Bifidobacterium bifidum NCIMB 41171]
Length = 217
Score = 204 bits (520), Expect = 6e-51, Method: Composition-based stats.
Identities = 81/211 (38%), Positives = 118/211 (55%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
++ RKLGMT V++ G +PVT++ + V ++ + +GY A+Q+G G+ V+
Sbjct: 9 KALLGRKLGMTQVWDENGFFVPVTLVDVSTNVVTAVKSEETDGYKAIQIGYGQIDPTKVT 68
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP+ G F+ V+P++ L E R +D G S F G VDVTG T GKGF+G
Sbjct: 69 KPLAGHFAKAGVTPRRHLVEVR-TEDAAEYEPGQELSIDAFAEGSEVDVTGTTKGKGFAG 127
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KR F R THG + R GS G P R+ K K+MAGRMG TV++L V+S
Sbjct: 128 TIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTATVQSLTVMSA 187
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D + ++ +KG +PG K +LVR + K A
Sbjct: 188 DAENNVLAIKGAIPGP-KGGIVLVRTAVKGA 217
>gi|171778375|ref|ZP_02919554.1| hypothetical protein STRINF_00405 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171282906|gb|EDT48330.1| hypothetical protein STRINF_00405 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 208
Score = 204 bits (520), Expect = 6e-51, Method: Composition-based stats.
Identities = 92/214 (42%), Positives = 129/214 (60%), Gaps = 6/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + +
Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EF+ + L VG + F G +VDVTG + GKGF
Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFKNIEG---LEVGQEITVDTFEAGDVVDVTGTSKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLEVV
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEVV 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V ++ +IL+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAAK 208
>gi|146298161|ref|YP_001192752.1| 50S ribosomal protein L3 [Flavobacterium johnsoniae UW101]
gi|189042844|sp|A5FMY1|RL3_FLAJO RecName: Full=50S ribosomal protein L3
gi|146152579|gb|ABQ03433.1| 50S ribosomal protein L3 [Flavobacterium johnsoniae UW101]
Length = 205
Score = 204 bits (520), Expect = 6e-51, Method: Composition-based stats.
Identities = 84/208 (40%), Positives = 124/208 (59%), Gaps = 4/208 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT +++ G+ IP TV+ C V RT + +GY A+Q+G + K+
Sbjct: 1 MSGLIGKKIGMTSIFDENGKNIPCTVIEAGPCVVTQVRTNEVDGYEALQLGFDDKNEKHS 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+K G F KKK+ EF+ + L G + S F G+ VDV G++ GKGF
Sbjct: 61 TKAALGHFKKAGTVAKKKVVEFQDFATEQKL--GDLIDVSIFEEGEFVDVQGVSKGKGFQ 118
Query: 122 GAMKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH F G +ATHG R+ GS G P RVFK +MAGRMGG+ V V+NL V+
Sbjct: 119 GVVKRHGFGGVGQATHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGGDNVKVQNLRVL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
V ++ L++VKGC+PG KNS+++++
Sbjct: 179 KVVAEKNLLVVKGCIPG-HKNSYVIIQK 205
>gi|226323010|ref|ZP_03798528.1| hypothetical protein COPCOM_00782 [Coprococcus comes ATCC 27758]
gi|225208577|gb|EEG90931.1| hypothetical protein COPCOM_00782 [Coprococcus comes ATCC 27758]
Length = 226
Score = 204 bits (520), Expect = 6e-51, Method: Composition-based stats.
Identities = 88/228 (38%), Positives = 123/228 (53%), Gaps = 19/228 (8%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++A K+GMT ++N +G PVTVL C V +T++ +GY AVQVG + K K
Sbjct: 1 MKKAILATKVGMTQIFNEDGVLTPVTVLQAGPCVVTQIKTVENDGYSAVQVGFVDKKDKI 60
Query: 61 VSKPMR----------------GFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
V+ G F V+ K+ + EF+ + D+ + F
Sbjct: 61 VNVDKNGKKEIVHRHGVTKAEKGHFDKAGVTGKRFVKEFKFENADE-YQLAQEIKADIFE 119
Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
G VD T ++ GKGF GA+KRHN HG S HR GS G DP +VFK KKM
Sbjct: 120 AGDKVDATAISKGKGFQGAIKRHNQHRGPMAHG-SKFHRHAGSNGAASDPSKVFKGKKMP 178
Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
G MG ++T++NLE+V VD + L+LVKG VPG KK S + +++S KS
Sbjct: 179 GHMGAKKITIQNLEIVRVDVENNLLLVKGAVPGPKK-SLVTIKESVKS 225
>gi|288904273|ref|YP_003429494.1| ribosomal protein L3 [Streptococcus gallolyticus UCN34]
gi|306830302|ref|ZP_07463473.1| 50S ribosomal protein L3 [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|320548055|ref|ZP_08042335.1| 50S ribosomal protein L3 [Streptococcus equinus ATCC 9812]
gi|325977252|ref|YP_004286968.1| 50S ribosomal protein L3 [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|288730998|emb|CBI12542.1| ribosomal protein L3 [Streptococcus gallolyticus UCN34]
gi|304427549|gb|EFM30650.1| 50S ribosomal protein L3 [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|320447297|gb|EFW88060.1| 50S ribosomal protein L3 [Streptococcus equinus ATCC 9812]
gi|325177180|emb|CBZ47224.1| 50S ribosomal protein L3 [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 208
Score = 204 bits (520), Expect = 6e-51, Method: Composition-based stats.
Identities = 92/214 (42%), Positives = 129/214 (60%), Gaps = 6/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + +
Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EF+ + L VG + F G +VDVTG + GKGF
Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFKNIEG---LEVGQEITVDTFEAGDVVDVTGTSKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLEVV
Sbjct: 118 QGVIKRHGQARGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEVV 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V ++ +IL+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAAK 208
>gi|6321659|ref|NP_011736.1| Mrpl9p [Saccharomyces cerevisiae S288c]
gi|1710598|sp|P31334|RM09_YEAST RecName: Full=54S ribosomal protein L9, mitochondrial; AltName:
Full=YmL9; Flags: Precursor
gi|886912|emb|CAA61168.1| ORF 269 [Saccharomyces cerevisiae]
gi|1323396|emb|CAA97248.1| MRPL9 [Saccharomyces cerevisiae]
gi|45270438|gb|AAS56600.1| YGR220C [Saccharomyces cerevisiae]
gi|151943496|gb|EDN61807.1| YmL9 [Saccharomyces cerevisiae YJM789]
gi|190406772|gb|EDV10039.1| 60S ribosomal protein L9, mitochondrial precursor [Saccharomyces
cerevisiae RM11-1a]
gi|207344963|gb|EDZ71935.1| YGR220Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272642|gb|EEU07619.1| Mrpl9p [Saccharomyces cerevisiae JAY291]
gi|259146721|emb|CAY79978.1| Mrpl9p [Saccharomyces cerevisiae EC1118]
gi|285812413|tpg|DAA08313.1| TPA: Mrpl9p [Saccharomyces cerevisiae S288c]
Length = 269
Score = 204 bits (520), Expect = 6e-51, Method: Composition-based stats.
Identities = 98/213 (46%), Positives = 139/213 (65%), Gaps = 2/213 (0%)
Query: 2 RSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
R G++ RK GM ++ G R T+L ++N +V++HRT + NGY A QVG G +
Sbjct: 58 RCGLITRKKGMMPYFDKSTGERSAATILEVNNVEVIMHRTSEVNGYFACQVGYGSRHLSK 117
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VS+ M G F+S V+PK+ + EFRV+ + L+P G++ PS+F GQ VDV ++ GKGF
Sbjct: 118 VSRQMLGHFASKVVNPKEHVAEFRVKDEKGLIPPGTLLKPSFFKEGQYVDVRSVSKGKGF 177
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR+ F GLRA+HG SI HR GS G QDPGRV +KM G MG VT++N++V+
Sbjct: 178 TGVMKRYGFKGLRASHGTSIMHRHGGSYGQNQDPGRVLPGRKMPGHMGNEHVTIQNVKVL 237
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VDD+ +I VKG V G KNS++ ++D+ K
Sbjct: 238 KVDDENNVIWVKGSVAGP-KNSFVKIQDAIKKT 269
>gi|284040621|ref|YP_003390551.1| 50S ribosomal protein L3 [Spirosoma linguale DSM 74]
gi|283819914|gb|ADB41752.1| 50S ribosomal protein L3 [Spirosoma linguale DSM 74]
Length = 220
Score = 204 bits (520), Expect = 6e-51, Method: Composition-based stats.
Identities = 86/206 (41%), Positives = 124/206 (60%), Gaps = 3/206 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT VYN +G+ + TV+ C V R+++K+GY AVQ+G G+ K K+
Sbjct: 15 MSGLIGKKIGMTSVYNADGQALACTVIETGPCVVTQVRSVEKDGYTAVQLGYGDKKEKHS 74
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F +PK+KL EF+ + + +L ++ F VDV G G+GF
Sbjct: 75 NKPEMGHFKKAGTTPKRKLVEFK-EFEQELALGTTLTVADVFAETDFVDVVGTAKGRGFQ 133
Query: 122 GAMKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH F G THG R GS G P RVFK +MAGRMGGNRV V+NL V+
Sbjct: 134 GVVKRHGFGGVGGQTHGQHNRGRHPGSIGACSFPSRVFKGLRMAGRMGGNRVKVQNLRVL 193
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
V ++ L++V G +PGA KNS++++
Sbjct: 194 RVLPEQNLLVVSGSIPGA-KNSYVII 218
>gi|3984|emb|CAA46148.1| YmL9 mitochondrial ribosomal protein [Saccharomyces cerevisiae]
Length = 269
Score = 204 bits (520), Expect = 6e-51, Method: Composition-based stats.
Identities = 97/213 (45%), Positives = 139/213 (65%), Gaps = 2/213 (0%)
Query: 2 RSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
R G++ RK GM ++ G R T+L ++N +V++HRT + NGY A QVG G +
Sbjct: 58 RCGLITRKKGMMPYFDKSTGERSAATILEVNNVEVIMHRTSEVNGYFACQVGYGSRHLSK 117
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VS+ M G F+S V+PK+ + +FRV+ + L+P G++ PS+F GQ VDV ++ GKGF
Sbjct: 118 VSRQMLGHFASKVVNPKEHVAQFRVKDEKGLIPPGTLLKPSFFKEGQYVDVRSVSKGKGF 177
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR+ F GLRA+HG SI HR GS G QDPGRV +KM G MG VT++N++V+
Sbjct: 178 TGVMKRYGFKGLRASHGTSIMHRHGGSYGQNQDPGRVLPGRKMPGHMGNEHVTIQNVKVL 237
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VDD+ +I VKG V G KNS++ ++D+ K
Sbjct: 238 KVDDENNVIWVKGSVAGP-KNSFVKIQDAIKKT 269
>gi|326692237|ref|ZP_08229242.1| 50S ribosomal protein L3 [Leuconostoc argentinum KCTC 3773]
Length = 228
Score = 204 bits (520), Expect = 6e-51, Method: Composition-based stats.
Identities = 79/219 (36%), Positives = 118/219 (53%), Gaps = 8/219 (3%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ G I VTV+ V+ +T++ +GY AVQ+G + +
Sbjct: 1 MTKGILGRKVGMTQVFTETGELIAVTVVEATPNVVLQVKTVETDGYDAVQLGYQDKRAVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G S N +PK+ + E ++ + G F G+ VDVTG+T G GF
Sbjct: 61 SNKPEQGHASKANTTPKRYVRE--IRNAEGEFNAGDEIKVDTFAAGEYVDVTGITKGHGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +K+ HG S HR GS G RVFK K + GRMG ++ T++N+ +V
Sbjct: 119 QGNIKKDGQSRGPMAHG-SRYHRRPGSMGAI--INRVFKGKLLPGRMGNHKRTMQNVAIV 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
VD + L+L+KG VPGA K S + ++ + K VN K
Sbjct: 176 HVDVENNLLLLKGNVPGANK-SLLTIKSTVK--VNAKHP 211
>gi|304384275|ref|ZP_07366686.1| 50S ribosomal protein L3 [Prevotella marshii DSM 16973]
gi|304334591|gb|EFM00873.1| 50S ribosomal protein L3 [Prevotella marshii DSM 16973]
Length = 204
Score = 204 bits (520), Expect = 6e-51, Method: Composition-based stats.
Identities = 87/206 (42%), Positives = 121/206 (58%), Gaps = 5/206 (2%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ RK+GMT V++ +G+ +P TV+ C V +TL+K+GY AVQ+G EAK +K
Sbjct: 3 GLIGRKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTLEKDGYKAVQLGFAEAKESRTTK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
PM G F +PKK L E K ++ +G + F + VDV G + GKGF G
Sbjct: 63 PMLGIFKKAGTTPKKHLVE---FKFEEEYNLGDTITVELFNDTEFVDVVGTSKGKGFQGV 119
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G ++THG R GS G P +VFK +MAG+MGG+RVT +NL V+ V
Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMAGQMGGDRVTTQNLRVLKV 179
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRD 208
+ LILVKG V G K S +L++
Sbjct: 180 IPEHNLILVKGSVAGC-KGSTVLIKK 204
>gi|169830436|ref|YP_001716418.1| ribosomal protein L3 [Candidatus Desulforudis audaxviator MP104C]
gi|212288256|sp|B1I1I8|RL3_DESAP RecName: Full=50S ribosomal protein L3
gi|169637280|gb|ACA58786.1| ribosomal protein L3 [Candidatus Desulforudis audaxviator MP104C]
Length = 213
Score = 204 bits (520), Expect = 6e-51, Method: Composition-based stats.
Identities = 91/212 (42%), Positives = 126/212 (59%), Gaps = 4/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RKLGM+ + EG +PVT++ C VV +T D +GY AVQ+G E K
Sbjct: 4 MAKGILGRKLGMSRFFTAEGVAVPVTLIEAGPCTVVQKKTPDTDGYSAVQLGFMEQPAKR 63
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V++P++G F V P + L E RV D VG V F VG++VDV G + GKGF
Sbjct: 64 VNRPLKGHFGRAGVKPSRFLRELRV-ADAADYEVGQVLKADLFDVGEIVDVVGTSKGKGF 122
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KRH F HG S HR G+ + P RVFK +K+ GR+GG RVTV+NLE+V
Sbjct: 123 AGGIKRHGFHRGPMGHG-SKYHRRPGALA-AKGPARVFKGRKLPGRLGGVRVTVQNLEIV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+ V+G VPG + S ++V+ + K
Sbjct: 181 KVDPERNLLAVRGAVPG-IRGSLVVVKSAVKG 211
>gi|72382967|ref|YP_292322.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. NATL2A]
gi|109893537|sp|Q46IQ9|RL3_PROMT RecName: Full=50S ribosomal protein L3
gi|72002817|gb|AAZ58619.1| LSU ribosomal protein L3P [Prochlorococcus marinus str. NATL2A]
Length = 218
Score = 204 bits (520), Expect = 6e-51, Method: Composition-based stats.
Identities = 77/217 (35%), Positives = 126/217 (58%), Gaps = 3/217 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGM+ +++ +GR +PVT++ C++ ++ D +GY AVQ+G + K
Sbjct: 1 MSLGILGKKLGMSQLFDDQGRAVPVTLIEAGPCRITQLKSADTDGYAAVQIGFQLIREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP +G + + L E+RV+ +G+ + F GQ VD++G T+G+GF
Sbjct: 61 INKPSKGHLAKSGNDLLRHLREYRVEN-SSEFELGASITVDDFEKGQKVDISGDTMGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G KRH F +HG S +HR GS G PGRV+ K+MAGRMGG +VT + LE++
Sbjct: 120 AGYQKRHGFSRGPMSHG-SKNHRLPGSIGAGTTPGRVYPGKRMAGRMGGKKVTTRALEIL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
+D L++VKG VPG S + +R + + +
Sbjct: 179 KIDTNHNLLVVKGSVPGKP-GSLLNIRPAKRVGAPTQ 214
>gi|258542027|ref|YP_003187460.1| 50S ribosomal protein L3 [Acetobacter pasteurianus IFO 3283-01]
gi|256633105|dbj|BAH99080.1| LSU ribosomal protein L3P [Acetobacter pasteurianus IFO 3283-01]
gi|256636162|dbj|BAI02131.1| LSU ribosomal protein L3P [Acetobacter pasteurianus IFO 3283-03]
gi|256639217|dbj|BAI05179.1| LSU ribosomal protein L3P [Acetobacter pasteurianus IFO 3283-07]
gi|256642271|dbj|BAI08226.1| LSU ribosomal protein L3P [Acetobacter pasteurianus IFO 3283-22]
gi|256645326|dbj|BAI11274.1| LSU ribosomal protein L3P [Acetobacter pasteurianus IFO 3283-26]
gi|256648381|dbj|BAI14322.1| LSU ribosomal protein L3P [Acetobacter pasteurianus IFO 3283-32]
gi|256651434|dbj|BAI17368.1| LSU ribosomal protein L3P [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256654425|dbj|BAI20352.1| LSU ribosomal protein L3P [Acetobacter pasteurianus IFO 3283-12]
Length = 227
Score = 204 bits (520), Expect = 6e-51, Method: Composition-based stats.
Identities = 128/219 (58%), Positives = 165/219 (75%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+G++A+KLGM+ ++ +G +PVTVLH+D+ QVV R +++GY+AVQ+G G+AKVKN
Sbjct: 1 MRTGLIAKKLGMSRLFKEDGTHVPVTVLHVDDVQVVDVRNQERDGYVAVQLGMGKAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP RG F+ V PK+ L EFRV DD L VG+ S S+F VGQ VDVTG++ GKGF
Sbjct: 61 VTKPNRGHFARTKVEPKQALREFRV-ADDAALEVGATLSASHFVVGQKVDVTGVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKR NF GL ATHGVSISHRSHGSTG RQDPG+ FKNKKMAG +G RVT NLE+
Sbjct: 120 AGAMKRWNFAGLEATHGVSISHRSHGSTGNRQDPGKTFKNKKMAGHLGDERVTTLNLEIA 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
+VD ++ LI+V+G VPGA KN +L+RD+ K A +
Sbjct: 180 AVDPEKNLIMVRGSVPGA-KNGVVLIRDAIKKARHGDAP 217
>gi|317125872|ref|YP_004099984.1| 50S ribosomal protein L3P [Intrasporangium calvum DSM 43043]
gi|315589960|gb|ADU49257.1| LSU ribosomal protein L3P [Intrasporangium calvum DSM 43043]
Length = 221
Score = 204 bits (520), Expect = 6e-51, Method: Composition-based stats.
Identities = 86/202 (42%), Positives = 119/202 (58%), Gaps = 2/202 (0%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
MT V++ + R +PVTV+ C V R +GY AVQ+ G + V++PM G F
Sbjct: 22 MTQVWDADNRLVPVTVVEAGPCVVTQVRNGATDGYDAVQIAFGAIDPRKVNQPMSGHFEK 81
Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
V+P++ L E R D +G S F GQ VD TG T GKGF+G MKRH F G
Sbjct: 82 AGVTPRRHLVELR-TADAADYELGQEISADVFEAGQRVDATGTTKGKGFAGVMKRHGFAG 140
Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
+ ++HG +HR GS G PGRVF+ +MAGRMGG R T +NL++ +VD ++GL+L+
Sbjct: 141 VSSSHGSHRNHRKPGSIGGCATPGRVFRGMRMAGRMGGVRQTTQNLQIHAVDAEKGLLLI 200
Query: 192 KGCVPGAKKNSWILVRDSFKSA 213
KG VPG + +L+R + K A
Sbjct: 201 KGAVPGP-RGGIVLIRTAAKGA 221
>gi|228474733|ref|ZP_04059464.1| 50S ribosomal protein L3 [Staphylococcus hominis SK119]
gi|314935832|ref|ZP_07843184.1| 50S ribosomal protein L3 [Staphylococcus hominis subsp. hominis
C80]
gi|228271396|gb|EEK12764.1| 50S ribosomal protein L3 [Staphylococcus hominis SK119]
gi|313656397|gb|EFS20137.1| 50S ribosomal protein L3 [Staphylococcus hominis subsp. hominis
C80]
Length = 220
Score = 204 bits (520), Expect = 6e-51, Method: Composition-based stats.
Identities = 92/223 (41%), Positives = 123/223 (55%), Gaps = 11/223 (4%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK- 59
M G++ RK+GMT V+ G IPVTV+ + V+ +T + +GY A+QVG + +
Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEANQNVVLQKKTEEVDGYNAIQVGFADKQAYK 60
Query: 60 -------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
+KP G +PK+ + EFR D+ VG + F G ++DVT
Sbjct: 61 KDAKSNKYANKPAEGHAKKAGAAPKRFIREFRNVNVDE-YEVGQEVTVDTFEAGDIIDVT 119
Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
G + GKGF GA+KRH G HG S HR+ GS G D RVFK +KM GRMGGN V
Sbjct: 120 GTSKGKGFQGAIKRHGQGRGPMAHG-SHFHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178
Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
TV+NLEVV VD +ILVKG VPG KK ++ ++ S K
Sbjct: 179 TVQNLEVVQVDTDNNVILVKGNVPGPKKG-FVEIKSSIKKGNK 220
>gi|256831827|ref|YP_003160554.1| 50S ribosomal protein L3 [Jonesia denitrificans DSM 20603]
gi|256685358|gb|ACV08251.1| ribosomal protein L3 [Jonesia denitrificans DSM 20603]
Length = 219
Score = 204 bits (519), Expect = 6e-51, Method: Composition-based stats.
Identities = 93/211 (44%), Positives = 128/211 (60%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
V+ +KLGMT V++ GR +PVTV+ ++ V RT+D +GY AVQV G+ + V+
Sbjct: 11 KAVLGKKLGMTQVWDEAGRLVPVTVVAVEPNVVTQIRTVDNDGYAAVQVATGQIDPRKVT 70
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP++G F V+P++ + E R D +G + F G VDV G T GKGF+G
Sbjct: 71 KPLKGHFEKAGVTPRRHVTEIRTS-DSGEYSLGQEVTVGVFEAGTKVDVIGTTKGKGFAG 129
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F G A+HG +HR GS G P RVFK +MAGRMG +R+TV+NL V +V
Sbjct: 130 VMKRHGFAGASASHGAHRNHRKPGSIGAAATPSRVFKGLRMAGRMGHDRMTVQNLTVHAV 189
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D +G +L+KG VPG K +LVR++ K A
Sbjct: 190 DADKGYVLLKGAVPGP-KGGVVLVRNAVKGA 219
>gi|159463470|ref|XP_001689965.1| mitochondrial ribosomal protein L3 [Chlamydomonas reinhardtii]
gi|158283953|gb|EDP09703.1| mitochondrial ribosomal protein L3 [Chlamydomonas reinhardtii]
Length = 285
Score = 204 bits (519), Expect = 6e-51, Method: Composition-based stats.
Identities = 95/209 (45%), Positives = 132/209 (63%), Gaps = 2/209 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
+R+G +A K GMT ++ G R+P+TVL +D CQVV +T +GY A+ +G+G + K
Sbjct: 6 LRTGCIATKAGMTQEWDEHGVRVPLTVLWVDECQVVGLKTRPVHGYNALMLGSGYKRQKC 65
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+S GFF V KK + E++V + D L+PVG+ +++ GQ VDVTG T KGF
Sbjct: 66 MSPSEAGFFLKAGVPFKKLVAEWQVSE-DALVPVGTAIGAAHYVAGQRVDVTGWTKWKGF 124
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G M+R F GL A+HGVS+SHR+ GS G RQDPG+++K KK+ G MG R TV N V
Sbjct: 125 QGVMRRWGFKGLPASHGVSLSHRAPGSIGNRQDPGKIWKGKKLPGCMGDERRTVHNCLVY 184
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
VD R L+ ++G VPG S + +RDS
Sbjct: 185 KVDAARNLVYLRGQVPGPVGRS-VFLRDS 212
>gi|313895368|ref|ZP_07828925.1| 50S ribosomal protein L3 [Selenomonas sp. oral taxon 137 str.
F0430]
gi|312976263|gb|EFR41721.1| 50S ribosomal protein L3 [Selenomonas sp. oral taxon 137 str.
F0430]
Length = 217
Score = 204 bits (519), Expect = 6e-51, Method: Composition-based stats.
Identities = 98/220 (44%), Positives = 130/220 (59%), Gaps = 5/220 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M ++ RKLGMT ++ EGR +PVTV+ N V+ ++T + +GY AVQ+G G+ K KN
Sbjct: 1 MAKAILGRKLGMTQIFTEEGRVVPVTVVESGNNLVLRNKTNETDGYNAVQIGFGDVKEKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP++G F V + + E R+ VG F G LVDV G + GKGF
Sbjct: 61 VTKPLKGQFEKAGVKAVRFIREMRLSAP-SEYNVGDTIGVDIFAEGDLVDVVGTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTG--CRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
+G +KRHNF HG S SHR GSTG GRV K KK+ GRMGG RVTV+ L
Sbjct: 120 AGGIKRHNFARGPMGHG-SKSHREPGSTGAMISGPGGRVLKGKKLPGRMGGERVTVQRLT 178
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
VV VD R LIL+KG +PG KK +++++D+ K A K
Sbjct: 179 VVRVDTDRNLILIKGAIPGPKKG-FVVIKDTVKPAKAAKE 217
>gi|288801098|ref|ZP_06406554.1| 50S ribosomal protein L3 [Prevotella sp. oral taxon 299 str. F0039]
gi|288332032|gb|EFC70514.1| 50S ribosomal protein L3 [Prevotella sp. oral taxon 299 str. F0039]
Length = 204
Score = 204 bits (519), Expect = 6e-51, Method: Composition-based stats.
Identities = 86/203 (42%), Positives = 122/203 (60%), Gaps = 4/203 (1%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ RK+GMT V++ +G+ IP TV+ C V +T++K+GY AVQ+G GEAK N +K
Sbjct: 3 GLIGRKIGMTSVFSADGKNIPCTVIEAGPCVVTQVKTIEKDGYKAVQLGFGEAKESNTNK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
PM G F +PKK L EF K D+ +G + F VDV G + GKGF G
Sbjct: 63 PMMGTFKKAGTTPKKHLAEF---KFDEEYNLGDTITVELFNDANFVDVVGTSKGKGFQGV 119
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G ++THG R GS G P +VFK +MAG+MGG+RVT +NL+V+ V
Sbjct: 120 IKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMAGQMGGDRVTTQNLKVLKV 179
Query: 183 DDKRGLILVKGCVPGAKKNSWIL 205
+ ++LVKG V G ++ ++
Sbjct: 180 IPEHNILLVKGSVAGCNGSTLLI 202
>gi|241895187|ref|ZP_04782483.1| 50S ribosomal protein L3 [Weissella paramesenteroides ATCC 33313]
gi|241871493|gb|EER75244.1| 50S ribosomal protein L3 [Weissella paramesenteroides ATCC 33313]
Length = 208
Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats.
Identities = 83/212 (39%), Positives = 119/212 (56%), Gaps = 6/212 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT V+ G IPVTV+ V+ +TL+ +GY A+Q+G + +
Sbjct: 3 TKGILGRKVGMTQVFTETGELIPVTVIEATPNVVLQVKTLENDGYSALQLGYQDKRQVLS 62
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP +G + N +PK+ + E R + + VG F G+ VDVTG+T G G+
Sbjct: 63 NKPEQGHVAKANTTPKRYIREIRDAEGE--FNVGDEVKVDIFAAGEAVDVTGITKGHGYQ 120
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +K+ HG S HR GS G RVFK KK+ GRMG ++ TV+NL+VV
Sbjct: 121 GNIKKDGQARGPMAHG-SRYHRRPGSLGAI--INRVFKGKKLPGRMGNHKRTVQNLQVVR 177
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD + +ILVKG VPGA K S + V+ S K+
Sbjct: 178 VDVENNVILVKGNVPGANK-SLVTVKYSKKAK 208
>gi|156044218|ref|XP_001588665.1| hypothetical protein SS1G_10212 [Sclerotinia sclerotiorum 1980]
gi|154694601|gb|EDN94339.1| hypothetical protein SS1G_10212 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 311
Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats.
Identities = 91/217 (41%), Positives = 132/217 (60%), Gaps = 3/217 (1%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
+R+G + K GMT +Y+ G R P TV+ LD QVV H+T +KNGY AVQVGAG
Sbjct: 74 LRTGALGIKKGMTALYDPETGVRTPCTVVQLDRVQVVAHKTREKNGYYAVQVGAGWKHPS 133
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
NVS+P G F + V+PK+ + EFRV+ + LL VG +F GQ VD + G G
Sbjct: 134 NVSRPELGHFEASEVAPKRHMAEFRVKNEGGLLEVGRSIGAEWFIEGQFVDARANSRGMG 193
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP-GRVFKNKKMAGRMGGNRVTVKNLE 178
F+G MK+ + G A+HG S +HR+ GS G Q RV K+MAGRMG ++VT++N++
Sbjct: 194 FAGGMKKWGWSGQPASHGNSKNHRTMGSAGASQGSGSRVHPGKRMAGRMGNHQVTIQNVK 253
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
V+ VD ++GL+++ GC+ G + ++D+ K
Sbjct: 254 VLKVDAEKGLVILNGCIAGPD-GCVVKIQDAIKKPWP 289
>gi|71902709|ref|YP_279512.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS6180]
gi|94987675|ref|YP_595776.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS9429]
gi|94989555|ref|YP_597655.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS10270]
gi|94991544|ref|YP_599643.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS2096]
gi|209558627|ref|YP_002285099.1| 50S ribosomal protein L3 [Streptococcus pyogenes NZ131]
gi|109893561|sp|Q48VU9|RL3_STRPM RecName: Full=50S ribosomal protein L3
gi|122986963|sp|Q1JE59|RL3_STRPB RecName: Full=50S ribosomal protein L3
gi|123382464|sp|Q1JJ62|RL3_STRPD RecName: Full=50S ribosomal protein L3
gi|123382568|sp|Q1JP17|RL3_STRPC RecName: Full=50S ribosomal protein L3
gi|226730577|sp|B5XJ36|RL3_STRPZ RecName: Full=50S ribosomal protein L3
gi|71801804|gb|AAX71157.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS6180]
gi|94541183|gb|ABF31232.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS9429]
gi|94543063|gb|ABF33111.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS10270]
gi|94545052|gb|ABF35099.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS2096]
gi|209539828|gb|ACI60404.1| LSU ribosomal protein L3p (L3e) [Streptococcus pyogenes NZ131]
Length = 208
Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats.
Identities = 93/214 (43%), Positives = 131/214 (61%), Gaps = 6/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + +
Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EF+ + L VG+ S F G +VDVTG + GKGF
Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFKNIEG---LEVGAELSVEQFEAGDVVDVTGTSKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFKNK++AGRMGGNRVTV+NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTVQNLEIV 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V ++ +IL+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAAK 208
>gi|33866599|ref|NP_898158.1| 50S ribosomal protein L3 [Synechococcus sp. WH 8102]
gi|42559596|sp|Q7U4K0|RL3_SYNPX RecName: Full=50S ribosomal protein L3
gi|33633377|emb|CAE08582.1| 50S ribosomal protein L3 [Synechococcus sp. WH 8102]
Length = 218
Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats.
Identities = 84/219 (38%), Positives = 129/219 (58%), Gaps = 4/219 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGM+ ++ +GR +PVT++ C++ ++ D +GY AVQ+G G+ + K
Sbjct: 1 MSIGILGKKLGMSQFFDEQGRAVPVTLIEAGPCRITQLKSSDTDGYAAVQIGFGDTREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP +G + + + L E+RV D GS + F GQ VDV+G TIG+GF
Sbjct: 61 INKPAKGHLNKTGETLLRHLREYRVDGLDGFELGGS-ITVGDFEAGQKVDVSGDTIGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
SG KRH F THG S +HR GS G PGR++ K+MAGR GG ++T + L ++
Sbjct: 120 SGYQKRHGFSRGPMTHG-SKNHREPGSIGPGTTPGRIYPGKRMAGRYGGKKITTRGLTIL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK-SAVNCKG 218
VD +R L++VKG VPG + + +R + + A KG
Sbjct: 179 KVDSERNLLVVKGSVPGKP-GALLNIRPALRVGAKPAKG 216
>gi|302773854|ref|XP_002970344.1| hypothetical protein SELMODRAFT_267426 [Selaginella moellendorffii]
gi|300161860|gb|EFJ28474.1| hypothetical protein SELMODRAFT_267426 [Selaginella moellendorffii]
Length = 279
Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats.
Identities = 109/212 (51%), Positives = 147/212 (69%), Gaps = 2/212 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+G++A K GMT V++ GRRIP+TVL D+ QVV +T+D G+ A+QVG G+ K K +
Sbjct: 28 RTGLIAVKCGMTAVWDKWGRRIPITVLWADDNQVVQVKTVDHEGFNALQVGCGQKKPKQL 87
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
S P G F S V K+KL EF+V + D LLPVG+ + +F GQ +DVTG++IGKGF
Sbjct: 88 SIPELGHFRSKGVPIKRKLKEFQVSE-DALLPVGTPLTVRHFVPGQFLDVTGVSIGKGFQ 146
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR F G+ A+HG S+SHRSHG+TG R+ PG+VFKNKKMAG+MG + TV + V
Sbjct: 147 GPMKRWGFAGMPASHGASLSHRSHGATGGRKSPGKVFKNKKMAGQMGNRKATVFCVWVYK 206
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
V+ +R LI VKG VPG K +++ +RDS+
Sbjct: 207 VEPQRDLIWVKGQVPGC-KGNFVYIRDSWNKP 237
>gi|281423839|ref|ZP_06254752.1| 50S ribosomal protein L3 [Prevotella oris F0302]
gi|299141147|ref|ZP_07034284.1| 50S ribosomal protein L3 [Prevotella oris C735]
gi|281402066|gb|EFB32897.1| 50S ribosomal protein L3 [Prevotella oris F0302]
gi|298577107|gb|EFI48976.1| 50S ribosomal protein L3 [Prevotella oris C735]
Length = 204
Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats.
Identities = 84/206 (40%), Positives = 121/206 (58%), Gaps = 5/206 (2%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT V++ +G+ +P TV+ C V +T +K+GY A+Q+G EAK SK
Sbjct: 3 GLIGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTEEKDGYKALQLGFEEAKENRTSK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
PM G F +PKK L EF K D+ +G + F + VD+ G + GKGF G
Sbjct: 63 PMMGTFKKAGTTPKKHLAEF---KFDEEHNLGDTITVELFADAKFVDIVGTSKGKGFQGV 119
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G ++THG R GS G P +VFK +MAG+MGG+RVT +NL+V+ V
Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMAGQMGGDRVTTQNLQVLKV 179
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRD 208
+ L+LVKG V G S +L++
Sbjct: 180 IPEHNLLLVKGSVAGC-NGSTVLIKK 204
>gi|242278658|ref|YP_002990787.1| ribosomal protein L3 [Desulfovibrio salexigens DSM 2638]
gi|259647407|sp|C6C185|RL3_DESAD RecName: Full=50S ribosomal protein L3
gi|242121552|gb|ACS79248.1| ribosomal protein L3 [Desulfovibrio salexigens DSM 2638]
Length = 210
Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats.
Identities = 87/208 (41%), Positives = 120/208 (57%), Gaps = 2/208 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +KLGMT V+ +G +PVTVL + C V+ +T +K GY A+Q+G + V
Sbjct: 4 TIGLLGKKLGMTRVFADDGSVVPVTVLEVGPCPVMQVKTEEKEGYNAIQIGYDALPERKV 63
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP +G + L EF ++ D +G S F G+ V VTG + GKGF
Sbjct: 64 NKPAKGHQEKAGKGYFRHLREFPLESVAD-YELGQEISVDIFAAGEKVKVTGTSKGKGFQ 122
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR NF G RA+HG HRS GS G PG+VFK KKM G+MG RVTV N+E+V
Sbjct: 123 GVMKRWNFAGSRASHGAEKVHRSPGSIGHATFPGKVFKGKKMPGQMGNERVTVSNIEIVD 182
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209
V +++VKG VPG KN +++R +
Sbjct: 183 VRADENVLVVKGQVPGP-KNGLVMIRKT 209
>gi|331004121|ref|ZP_08327601.1| 50S ribosomal protein L3 [Lachnospiraceae oral taxon 107 str.
F0167]
gi|330411531|gb|EGG90941.1| 50S ribosomal protein L3 [Lachnospiraceae oral taxon 107 str.
F0167]
Length = 225
Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats.
Identities = 79/227 (34%), Positives = 113/227 (49%), Gaps = 16/227 (7%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++ARK+GMT +++ G IPVTVL C V +T + +GY +VQV G+ + K
Sbjct: 1 MKKAILARKVGMTQIFDENGVLIPVTVLLAGPCVVTQVKTEENDGYNSVQVAYGQIRTKL 60
Query: 61 VSKPMRGFFSSVNVSPKKK--------------LFEFRVQKDDDLLPVGSVFSPSYFTVG 106
V+K G + + ++ + F G
Sbjct: 61 VNKAKAGHLAKAGIEKVVVENGDKKREIFTAGRFIREFKFENASEYAPKAEIKADIFAAG 120
Query: 107 QLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGR 166
+D T ++ GKGF GA+KRH +HG S HR GS G DP VFK K M G
Sbjct: 121 DKIDATAISKGKGFQGAIKRHGQSRGPMSHG-SKFHRHQGSNGSSSDPSHVFKGKGMPGH 179
Query: 167 MGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
MG RVT +NLE+V VD + LILVKG +PG+KK + I ++++ K
Sbjct: 180 MGAKRVTTQNLEIVRVDADKNLILVKGSMPGSKK-ALITLKETVKKK 225
>gi|313889584|ref|ZP_07823229.1| 50S ribosomal protein L3 [Streptococcus pseudoporcinus SPIN 20026]
gi|313122093|gb|EFR45187.1| 50S ribosomal protein L3 [Streptococcus pseudoporcinus SPIN 20026]
Length = 208
Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats.
Identities = 91/214 (42%), Positives = 130/214 (60%), Gaps = 6/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + +
Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EF+ + L VG+ + F G +VDVTG + GKGF
Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFKNIEG---LEVGAEITVDTFEAGDVVDVTGTSKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIV 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V ++ +IL+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAAK 208
>gi|195977208|ref|YP_002122452.1| 50S ribosomal protein L3 [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|225867665|ref|YP_002743613.1| 50S ribosomal protein L3 [Streptococcus equi subsp. zooepidemicus]
gi|226730570|sp|B4U500|RL3_STREM RecName: Full=50S ribosomal protein L3
gi|259709735|sp|C0MCB0|RL3_STRS7 RecName: Full=50S ribosomal protein L3
gi|195973913|gb|ACG61439.1| 50S ribosomal protein L3 [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|225700941|emb|CAW97644.1| 50S ribosomal protein L3 [Streptococcus equi subsp. zooepidemicus]
Length = 208
Score = 204 bits (519), Expect = 8e-51, Method: Composition-based stats.
Identities = 90/214 (42%), Positives = 130/214 (60%), Gaps = 6/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY A+QVG + +
Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAIQVGFDDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EF+ + L VG+ + F G +VDVTG + GKGF
Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFKNIEG---LEVGAEITVDIFAAGDVVDVTGTSKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIV 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V ++ +IL+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAAK 208
>gi|19745241|ref|NP_606377.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS8232]
gi|21909576|ref|NP_663844.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS315]
gi|28894954|ref|NP_801304.1| 50S ribosomal protein L3 [Streptococcus pyogenes SSI-1]
gi|71909858|ref|YP_281408.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS5005]
gi|139472927|ref|YP_001127642.1| 50S ribosomal protein L3 [Streptococcus pyogenes str. Manfredo]
gi|251781515|ref|YP_002995816.1| 50S ribosomal protein L3 [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|306828260|ref|ZP_07461520.1| 50S ribosomal protein L3 [Streptococcus pyogenes ATCC 10782]
gi|42559572|sp|P60451|RL3_STRP3 RecName: Full=50S ribosomal protein L3
gi|42559573|sp|P60452|RL3_STRP8 RecName: Full=50S ribosomal protein L3
gi|166234599|sp|A2RC14|RL3_STRPG RecName: Full=50S ribosomal protein L3
gi|19747335|gb|AAL96876.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS8232]
gi|21903757|gb|AAM78647.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS315]
gi|28810199|dbj|BAC63137.1| 50S ribosomal protein L3 [Streptococcus pyogenes SSI-1]
gi|71852640|gb|AAZ50663.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS5005]
gi|134271173|emb|CAM29386.1| 50S ribosomal protein L3 [Streptococcus pyogenes str. Manfredo]
gi|242390143|dbj|BAH80602.1| 50S ribosomal protein L3 [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|304429571|gb|EFM32620.1| 50S ribosomal protein L3 [Streptococcus pyogenes ATCC 10782]
gi|323126311|gb|ADX23608.1| 50S ribosomal protein L3 [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
Length = 208
Score = 204 bits (519), Expect = 8e-51, Method: Composition-based stats.
Identities = 94/214 (43%), Positives = 131/214 (61%), Gaps = 6/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + +
Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EF+ + L VG+ S F G +VDVTG + GKGF
Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFKNIEG---LEVGAELSVEQFEAGDVVDVTGTSKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFKNK++AGRMGGNRVTV+NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTVQNLEIV 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V ++ +ILVKG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVILVKGNVPGAKK-SLITIKSAVKAAK 208
>gi|78185522|ref|YP_377956.1| 50S ribosomal protein L3 [Synechococcus sp. CC9902]
gi|109893566|sp|Q3AUW3|RL3_SYNS9 RecName: Full=50S ribosomal protein L3
gi|78169816|gb|ABB26913.1| LSU ribosomal protein L3P [Synechococcus sp. CC9902]
Length = 218
Score = 204 bits (519), Expect = 8e-51, Method: Composition-based stats.
Identities = 82/219 (37%), Positives = 128/219 (58%), Gaps = 4/219 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGM+ +++ +GR +PVT++ C++ + D +GY AVQ+G GE + K
Sbjct: 1 MSIGILGKKLGMSQLFDEQGRAVPVTLIEAGPCRITQLKNDDTDGYAAVQIGFGETREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP +G + + L E+RV D L GS + S F GQ VDV+G T+G+GF
Sbjct: 61 INKPSKGHLTKSGEDLLRHLREYRVDNVDGLELGGS-ITVSDFEAGQKVDVSGDTMGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G KRH F THG S +HR GS G PGR++ K+M+GR GG + T + L ++
Sbjct: 120 AGLQKRHGFSRGPMTHG-SKNHRQPGSIGAGTTPGRIYPGKRMSGRYGGKKTTTRGLTIL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK-SAVNCKG 218
+D R L++VKG VPG + + ++ + + A KG
Sbjct: 179 RIDSDRNLLVVKGSVPGKP-GALLNIKPAVRVGAKPAKG 216
>gi|15674287|ref|NP_268460.1| 50S ribosomal protein L3 [Streptococcus pyogenes M1 GAS]
gi|42559685|sp|Q9A1X4|RL3_STRP1 RecName: Full=50S ribosomal protein L3
gi|13621367|gb|AAK33182.1| 50S ribosomal protein L3 [Streptococcus pyogenes M1 GAS]
Length = 208
Score = 204 bits (519), Expect = 8e-51, Method: Composition-based stats.
Identities = 94/214 (43%), Positives = 132/214 (61%), Gaps = 6/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + +
Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EF+ + L VG+ S F G +VDVTG++ GKGF
Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFKNIEG---LEVGAELSVEQFEAGDVVDVTGISKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFKNK++AGRMGGNRVTV+NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTVQNLEIV 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V ++ +ILVKG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVILVKGNVPGAKK-SLITIKSAVKAAK 208
>gi|302498268|ref|XP_003011132.1| hypothetical protein ARB_02654 [Arthroderma benhamiae CBS 112371]
gi|291174680|gb|EFE30492.1| hypothetical protein ARB_02654 [Arthroderma benhamiae CBS 112371]
gi|326474709|gb|EGD98718.1| 50S ribosomal protein L3 [Trichophyton tonsurans CBS 112818]
gi|326484840|gb|EGE08850.1| 50S ribosomal protein L3 [Trichophyton equinum CBS 127.97]
Length = 304
Score = 204 bits (519), Expect = 8e-51, Method: Composition-based stats.
Identities = 100/217 (46%), Positives = 143/217 (65%), Gaps = 3/217 (1%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
+R+G +A K GMT +Y+ G R P TVL LD QV+ H+T +KNGY AVQVG+G +
Sbjct: 77 LRTGALAIKKGMTAIYDPETGVRTPCTVLQLDGAQVISHKTFEKNGYCAVQVGSGLKNER 136
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
NV++PM G FS+ VSPK+ + EFRV+ + LLP+G V + +F GQ VDV + G G
Sbjct: 137 NVTRPMLGHFSANGVSPKRHIHEFRVKDETGLLPIGEVINADWFQEGQYVDVRSNSRGMG 196
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ-DPGRVFKNKKMAGRMGGNRVTVKNLE 178
F+GAMK+ F G +HGVS++HRS GST Q RV+ KKM GRMG ++VT+++L+
Sbjct: 197 FAGAMKKWGFHGQDRSHGVSLTHRSLGSTAPSQGGGSRVYPGKKMPGRMGNHQVTLQSLK 256
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
V+ VD ++G+++VKG V G K + ++D+ K
Sbjct: 257 VLKVDAEKGIVVVKGGVAGP-KGRCVKIQDAIKKPWP 292
>gi|302869972|ref|YP_003838609.1| 50S ribosomal protein L3 [Micromonospora aurantiaca ATCC 27029]
gi|315501433|ref|YP_004080320.1| 50S ribosomal protein l3 [Micromonospora sp. L5]
gi|302572831|gb|ADL49033.1| 50S ribosomal protein L3 [Micromonospora aurantiaca ATCC 27029]
gi|315408052|gb|ADU06169.1| 50S ribosomal protein L3 [Micromonospora sp. L5]
Length = 221
Score = 204 bits (519), Expect = 8e-51, Method: Composition-based stats.
Identities = 95/218 (43%), Positives = 131/218 (60%), Gaps = 3/218 (1%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT V++ + +PVTV+ C V R+ DK+GY AVQ+ G + V
Sbjct: 6 KGILGAKLGMTQVWD-NNKVVPVTVVQAGPCVVSQVRSADKDGYSAVQLAYGVIDPRKVK 64
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP+ G ++ +V+P++ + E R D G + F G ++DVTG T GKG++G
Sbjct: 65 KPIAGHYAKADVAPRRHIVELRTS-DAADYAPGQEVTVEEFPAGVVIDVTGKTKGKGYAG 123
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F GLRA+HGV HRS GS G PGRVFK +MAGRMGG R TV+NL V +V
Sbjct: 124 PMKRHGFHGLRASHGVERKHRSPGSIGACATPGRVFKGTRMAGRMGGVRYTVQNLTVQAV 183
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
D + L+LV+G +PG K + +LVR + K+ V G
Sbjct: 184 DTENNLLLVRGAIPGP-KGALVLVRTAAKAKVKKGGAA 220
>gi|114330574|ref|YP_746796.1| ribosomal protein L3 [Nitrosomonas eutropha C91]
gi|122314432|sp|Q0AIJ5|RL3_NITEC RecName: Full=50S ribosomal protein L3
gi|114307588|gb|ABI58831.1| LSU ribosomal protein L3P [Nitrosomonas eutropha C91]
Length = 217
Score = 204 bits (519), Expect = 8e-51, Method: Composition-based stats.
Identities = 93/217 (42%), Positives = 135/217 (62%), Gaps = 3/217 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ G++ +K+GMT ++ G +PVTVL + +VV +T +++GY A+Q+ G +
Sbjct: 1 MKLGLIGKKVGMTRIFTESGSSVPVTVLDVSKNRVVQIKTAERDGYSAIQLTQGYRRKNR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
++K + G F+ V K + EFR+++ L +GS + F G VDV+G++IGK
Sbjct: 61 ITKALSGHFARAGVEAGKVIKEFRIEQQAINSDLKLGSEINVEIFLTGSKVDVSGVSIGK 120
Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
G++G +KRHNF RA+HG S SH GS G QDPGRVF KKM GR+GG T++N+E
Sbjct: 121 GYAGTIKRHNFSSSRASHGNSRSHNVPGSIGMAQDPGRVFPGKKMTGRLGGVNSTIQNIE 180
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
VV VD RGLI +KG VPG+K N + +R S K A
Sbjct: 181 VVRVDTVRGLIFLKGSVPGSKGNG-VFIRPSVKHANK 216
>gi|260655383|ref|ZP_05860871.1| 50S ribosomal protein L3 [Jonquetella anthropi E3_33 E1]
gi|260629831|gb|EEX48025.1| 50S ribosomal protein L3 [Jonquetella anthropi E3_33 E1]
Length = 207
Score = 204 bits (519), Expect = 8e-51, Method: Composition-based stats.
Identities = 104/207 (50%), Positives = 132/207 (63%), Gaps = 2/207 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT VY+ EGR IPVTV+ C VV RT +KNGY AV +G E K + V
Sbjct: 1 MIGILGQKVGMTRVYSEEGRAIPVTVIAAGPCPVVDLRTPEKNGYSAVLLGFSERKPQRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SKP+ G F V+P + L EFRV D +G + S F G+ VDVTG + GKG +
Sbjct: 61 SKPLAGTFKRAGVTPCRWLREFRV-ADSGKWEIGGTVNVSLFQAGEAVDVTGTSKGKGTA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR+ FGG A+HGVS +HR S+G P RVFK K+M GRMG RVTVKNL VV+
Sbjct: 120 GVIKRYGFGGAPASHGVSKTHRKPNSSGASSYPSRVFKGKRMPGRMGNERVTVKNLTVVA 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRD 208
+D + L+LVKG VPGA KN +LV
Sbjct: 180 IDVENNLLLVKGAVPGA-KNGLVLVHK 205
>gi|116075767|ref|ZP_01473026.1| 50S ribosomal protein L3 [Synechococcus sp. RS9916]
gi|116067082|gb|EAU72837.1| 50S ribosomal protein L3 [Synechococcus sp. RS9916]
Length = 218
Score = 204 bits (519), Expect = 8e-51, Method: Composition-based stats.
Identities = 79/216 (36%), Positives = 127/216 (58%), Gaps = 3/216 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGM+ ++ +G+ +PVT++ C++ +T + +GY AVQ+G GE + K
Sbjct: 1 MSIGILGKKLGMSQFFDEQGKAVPVTLIEAGPCRITQLKTSETDGYSAVQIGFGETRDKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP +G + + L E+RV D +G+ + F GQ VDV+G ++G+GF
Sbjct: 61 INKPAKGHLAKSGEELLRHLSEYRVD-DVSGFELGNQVTVGDFEAGQKVDVSGDSMGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G KRH F THG S +HR GSTG PGR++ K+MAGR GG ++T + L ++
Sbjct: 120 AGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKITTRGLTII 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
VD +R L++VKG VPG S + +R + +
Sbjct: 179 KVDSERNLLVVKGSVPGKP-GSLLNIRPANRVGAKP 213
>gi|86739295|ref|YP_479695.1| 50S ribosomal protein L3 [Frankia sp. CcI3]
gi|109893429|sp|Q2JFH6|RL3_FRASC RecName: Full=50S ribosomal protein L3
gi|86566157|gb|ABD09966.1| LSU ribosomal protein L3P [Frankia sp. CcI3]
Length = 235
Score = 204 bits (518), Expect = 8e-51, Method: Composition-based stats.
Identities = 93/209 (44%), Positives = 123/209 (58%), Gaps = 2/209 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ KLGMT V++ R +PVTV+ V +T D +GY AVQ+G GE + ++K
Sbjct: 8 GLLGTKLGMTQVWDANNRVVPVTVIKAGPNVVTQVKTPDSDGYSAVQLGYGEVDPRKINK 67
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P RG F++ V+P++ L E R D G + F+ G +VDVTG + GKGF+G
Sbjct: 68 PARGHFATSGVTPRRHLVELR-TADAGNYRPGQELTGEVFSAGTVVDVTGTSKGKGFAGV 126
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
MKRH F GL A HGV HRS GS G PGRVFK +MAGRMG R T L + +VD
Sbjct: 127 MKRHGFKGLGAGHGVERKHRSPGSVGGCATPGRVFKGLRMAGRMGHVRTTTSGLTIHAVD 186
Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+RG +LV+G VPG +LVR + K
Sbjct: 187 TERGYLLVRGAVPGPD-GGLVLVRSAAKR 214
>gi|116072564|ref|ZP_01469830.1| 50S ribosomal protein L3 [Synechococcus sp. BL107]
gi|116064451|gb|EAU70211.1| 50S ribosomal protein L3 [Synechococcus sp. BL107]
Length = 218
Score = 204 bits (518), Expect = 8e-51, Method: Composition-based stats.
Identities = 83/219 (37%), Positives = 128/219 (58%), Gaps = 4/219 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGM+ +++ +GR +PVT++ C++ + D +GY AVQ+G GE + K
Sbjct: 1 MSIGILGKKLGMSQLFDEQGRAVPVTLIEAGPCRITQLKNDDTDGYAAVQIGFGETREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP +G + + L E+RV D L GS + S F GQ VDV+G T+G+GF
Sbjct: 61 INKPSKGHLTKSGEDLLRHLREYRVDNVDGLELGGS-ITVSDFEAGQKVDVSGDTMGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G KRH F THG S +HR GS G PGR++ K+M+GR GG + T + L ++
Sbjct: 120 AGLQKRHGFSRGPMTHG-SKNHRQPGSIGAGTTPGRIYPGKRMSGRYGGKKTTTRGLTIL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK-SAVNCKG 218
VD R L++VKG VPG + + ++ + + A KG
Sbjct: 179 RVDSDRNLLVVKGSVPGKP-GALLNIKPAVRVGAKPAKG 216
>gi|210631082|ref|ZP_03296738.1| hypothetical protein COLSTE_00623 [Collinsella stercoris DSM 13279]
gi|210160170|gb|EEA91141.1| hypothetical protein COLSTE_00623 [Collinsella stercoris DSM 13279]
Length = 206
Score = 204 bits (518), Expect = 9e-51, Method: Composition-based stats.
Identities = 88/209 (42%), Positives = 120/209 (57%), Gaps = 3/209 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M + ++ RK+GMT V++ + +PVTV+ C V +T +GY AVQ+G G+ K K+
Sbjct: 1 MINMILGRKIGMTQVWDEDDNVVPVTVIQAGPCTVSQVKTEATDGYNAVQIGFGDIKSKH 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KPM G F+ V P + L E RV+ ++ V + +V + VDV G + GKGF
Sbjct: 61 VNKPMAGHFAKAGVEPVRYLREVRVENGEEHKVGDVVTVADFESVAK-VDVIGTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR N +HG I R GS G P RV K KMAG MG RVTVKNL VV
Sbjct: 120 QGRIKRWNQHRGPMSHGSHI-QRHPGSIGQCAYPARVLKGVKMAGHMGNARVTVKNLSVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
+D ++ LILVKG VPG KN + +R +
Sbjct: 179 RIDAEQNLILVKGAVPGG-KNGLVAIRMA 206
>gi|167629467|ref|YP_001679966.1| 50S ribosomal protein l3 [Heliobacterium modesticaldum Ice1]
gi|212288399|sp|B0TC56|RL3_HELMI RecName: Full=50S ribosomal protein L3
gi|167592207|gb|ABZ83955.1| 50S ribosomal protein l3 [Heliobacterium modesticaldum Ice1]
Length = 210
Score = 204 bits (518), Expect = 9e-51, Method: Composition-based stats.
Identities = 91/212 (42%), Positives = 128/212 (60%), Gaps = 4/212 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
+ G++ RK+GMT V+ G +PVTV+ C VV +T++K+GY AVQ+G G+ + K +
Sbjct: 3 KKGLLGRKIGMTQVFADNGVAVPVTVVQAGPCVVVQKKTVEKDGYEAVQIGFGDVREKLL 62
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP RG + V + L E +V D+ VG F+ G+ VDV G + GKGF+
Sbjct: 63 NKPKRGHLKNAGVRLVRVLREIKVDSMDE-YKVGQELKADVFSAGEYVDVVGTSKGKGFA 121
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRHNF HG S HR GS G + P R+FK +KM GRMG RVTV+ L+VV
Sbjct: 122 GGIKRHNFKRGPMKHG-SKYHRRPGSAG-AKGPARIFKGRKMPGRMGNERVTVQKLQVVR 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD +R L+L+KG VPG K +L++ S K+
Sbjct: 180 VDAERNLLLIKGAVPGP-KRGLLLIKSSIKAK 210
>gi|240145878|ref|ZP_04744479.1| 50S ribosomal protein L3 [Roseburia intestinalis L1-82]
gi|257202027|gb|EEV00312.1| 50S ribosomal protein L3 [Roseburia intestinalis L1-82]
gi|291535430|emb|CBL08542.1| LSU ribosomal protein L3P [Roseburia intestinalis M50/1]
gi|291537926|emb|CBL11037.1| LSU ribosomal protein L3P [Roseburia intestinalis XB6B4]
Length = 227
Score = 204 bits (518), Expect = 9e-51, Method: Composition-based stats.
Identities = 86/230 (37%), Positives = 121/230 (52%), Gaps = 19/230 (8%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV-- 58
M+ ++A K+GMT ++N +G +PVTVL C V +T++ +GY AVQV + K
Sbjct: 1 MKKAILATKVGMTQIFNADGVLVPVTVLEAGPCSVTQIKTVENDGYSAVQVAYADKKEKV 60
Query: 59 --------------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
V+K G F+ VS K+ + EF+ + D+ +G V F
Sbjct: 61 VSKDANGKKEIRNRHGVNKAQMGHFAKAGVSGKRYVREFKFENADE-YKLGDVIKADIFA 119
Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
G +D T ++ GKGF GA+KR HG S HR GS G P RVFK K M
Sbjct: 120 EGDKIDATAISKGKGFQGAIKRLGQHRGPMAHG-SKFHRHQGSNGACSSPSRVFKGKGMP 178
Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
G MG +VT +NLEVV VD + L+LVKG VPGAKK + ++++ K+
Sbjct: 179 GHMGSVKVTTQNLEVVRVDAENNLLLVKGAVPGAKK-CMVTIKETVKAGK 227
>gi|159028206|emb|CAO89813.1| rplC [Microcystis aeruginosa PCC 7806]
Length = 212
Score = 204 bits (518), Expect = 9e-51, Method: Composition-based stats.
Identities = 89/212 (41%), Positives = 124/212 (58%), Gaps = 4/212 (1%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
M G++ KLGMT +++ G IPVTV+ C V +T +GY ++QVG K K
Sbjct: 1 MSIGILGTKLGMTQIFDNKTGVAIPVTVVQAGPCPVTQVKTKKTDGYESIQVGYKTVKEK 60
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
++KP+ G + VSP + L E+R+ +D +G + + F G LVDV G TIG+G
Sbjct: 61 ALNKPLLGHLAKAGVSPLRHLIEYRL-EDASAYTLGQEITAAIFQEGDLVDVAGTTIGRG 119
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
FSG KRHNF THG S +HR GSTG PGRVF K+MAG+ G +VT++ L V
Sbjct: 120 FSGYQKRHNFKRGNMTHG-SKNHRLPGSTGAGTTPGRVFPGKRMAGQYGSTQVTIRKLSV 178
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
V +D +R LIL+KG VPG + + + + K
Sbjct: 179 VKIDSERNLILIKGAVPGKP-GTLLNITPAKK 209
>gi|198282637|ref|YP_002218958.1| 50S ribosomal protein L3 [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218666383|ref|YP_002424830.1| ribosomal protein L3 [Acidithiobacillus ferrooxidans ATCC 23270]
gi|226725119|sp|B7J467|RL3_ACIF2 RecName: Full=50S ribosomal protein L3
gi|226725120|sp|B5ELX9|RL3_ACIF5 RecName: Full=50S ribosomal protein L3
gi|198247158|gb|ACH82751.1| ribosomal protein L3 [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218518596|gb|ACK79182.1| ribosomal protein L3 [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 210
Score = 204 bits (518), Expect = 9e-51, Method: Composition-based stats.
Identities = 93/212 (43%), Positives = 132/212 (62%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT + +GR +PVTV+H+ V + + +GY AVQV G + +
Sbjct: 1 MVMGLIGRKVGMTRIVAGDGRVLPVTVIHVAPNTVAQVKDIATDGYCAVQVATGTRRPQR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+ + G F ++P + L EFRV D G F GQ VDV+G++ GKGF
Sbjct: 61 VTSALAGHFRKNGIAPGRLLREFRV-ADTANYACGMDIDLDIFAEGQRVDVSGVSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GA+KRHNF RA+HG S+SHR+ GS GCRQ PGRVFK KKMAG +G +VT NLE+V
Sbjct: 120 AGAIKRHNFRSNRASHGNSLSHRAPGSIGCRQTPGRVFKGKKMAGHLGAEQVTTLNLELV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+D R L+++KG VPGA+ +++R + +
Sbjct: 180 RIDANRRLLMIKGAVPGARDGD-VMIRPAVRG 210
>gi|300868356|ref|ZP_07112982.1| 50S ribosomal protein L3 [Oscillatoria sp. PCC 6506]
gi|300333649|emb|CBN58170.1| 50S ribosomal protein L3 [Oscillatoria sp. PCC 6506]
Length = 211
Score = 204 bits (518), Expect = 9e-51, Method: Composition-based stats.
Identities = 89/211 (42%), Positives = 124/211 (58%), Gaps = 3/211 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ KLGMT V++ +GR IPVTV+ C V +T +GY A+QVG G+ K K
Sbjct: 1 MSVGILGTKLGMTQVFDEQGRAIPVTVIQAGPCTVTQIKTKQTDGYAAIQVGYGDVKAKA 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP G + +P + L E+R+ +D +G FT GQ+VDV G +IGKGF
Sbjct: 61 LNKPELGHLAKSGATPVRHLQEYRL-EDIGEFQLGQQVKADLFTPGQIVDVIGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G KRHNF HG S +HR GS G PGRV+ K+MAGR+G ++TV+ L V+
Sbjct: 120 AGFQKRHNFKRGPMAHG-SKNHRQPGSIGPGTTPGRVYPGKRMAGRLGNVQITVRKLTVL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
VD +R L+L+KG VPG + + V K
Sbjct: 179 RVDTERNLLLIKGAVPGKA-GALVNVVPEKK 208
>gi|225869536|ref|YP_002745483.1| 50S ribosomal protein L3 [Streptococcus equi subsp. equi 4047]
gi|254803692|sp|C0M660|RL3_STRE4 RecName: Full=50S ribosomal protein L3
gi|225698940|emb|CAW91967.1| 50S ribosomal protein L3 [Streptococcus equi subsp. equi 4047]
Length = 208
Score = 204 bits (518), Expect = 9e-51, Method: Composition-based stats.
Identities = 90/214 (42%), Positives = 129/214 (60%), Gaps = 6/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ K+GMT ++ G IPVTV+ V+ +T++ +GY A+QVG + +
Sbjct: 1 MTKGILGEKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAIQVGFDDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EF+ + L VG+ + F G +VDVTG + GKGF
Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFKNIEG---LEVGAEITVDIFAAGDVVDVTGTSKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVS-PNRVFKNKHLAGRMGGNRVTIQNLEIV 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V ++ +IL+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAAK 208
>gi|183601944|ref|ZP_02963313.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis
HN019]
gi|219682857|ref|YP_002469240.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis
AD011]
gi|241190433|ref|YP_002967827.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|241195839|ref|YP_002969394.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis
DSM 10140]
gi|183218829|gb|EDT89471.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis
HN019]
gi|219620507|gb|ACL28664.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis
AD011]
gi|240248825|gb|ACS45765.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|240250393|gb|ACS47332.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis
DSM 10140]
gi|289178157|gb|ADC85403.1| LSU ribosomal protein L3P [Bifidobacterium animalis subsp. lactis
BB-12]
gi|295793420|gb|ADG32955.1| 50S ribosomal protein L3 [Bifidobacterium animalis subsp. lactis
V9]
Length = 216
Score = 204 bits (518), Expect = 9e-51, Method: Composition-based stats.
Identities = 84/212 (39%), Positives = 122/212 (57%), Gaps = 2/212 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+ ++ +KLGM+ V++ G +PVT++ + V + + +GY AVQ+G G+ + V
Sbjct: 7 RNALLGKKLGMSQVWDENGFFVPVTLVEVSTNVVTAVKNEETDGYKAVQLGYGQVDPRKV 66
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KPM G F+ V+P++ L E R + +D G + F G VDVTG T GKGF+
Sbjct: 67 TKPMAGHFAKAGVTPRRHLAEVRTENVED-FEPGQELTAEVFPEGVQVDVTGTTKGKGFA 125
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR F R THG + R GS G P R+ K K+MAGRMG TV+NL VVS
Sbjct: 126 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGHVTNTVQNLTVVS 185
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D + G++ +KG +PG K +LVR + K A
Sbjct: 186 SDVENGILAIKGAIPGP-KGGIVLVRSAVKGA 216
>gi|328958728|ref|YP_004376114.1| 50S ribosomal protein L3 [Carnobacterium sp. 17-4]
gi|328675052|gb|AEB31098.1| 50S ribosomal protein L3 [Carnobacterium sp. 17-4]
Length = 210
Score = 204 bits (518), Expect = 9e-51, Method: Composition-based stats.
Identities = 91/214 (42%), Positives = 126/214 (58%), Gaps = 4/214 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT V+ G IPVTV+ V+ +T++ +GY AVQ+G + +
Sbjct: 1 MTKGILGKKVGMTQVFTESGELIPVTVIEATPNVVLQVKTIETDGYEAVQLGYQDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP G + N +PK+ + EF + D VG F G +V+VTG T GKGF
Sbjct: 61 SNKPAMGHVAKANATPKRFIREFDDVELGD-YEVGQEVKVDAFKAGDIVNVTGTTKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH +HG S HR GS G DP RVFK + GRMGGNRVT+KNLEVV
Sbjct: 120 QGVIKRHGHSRGPMSHG-SRHHRRPGSMGPV-DPNRVFKRTLLPGRMGGNRVTIKNLEVV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VD ++ +IL+KG VPG+KK S I ++ +F+ A
Sbjct: 178 RVDVEKNVILIKGNVPGSKK-SLIQIKSAFQKAK 210
>gi|160894756|ref|ZP_02075531.1| hypothetical protein CLOL250_02307 [Clostridium sp. L2-50]
gi|156863690|gb|EDO57121.1| hypothetical protein CLOL250_02307 [Clostridium sp. L2-50]
Length = 227
Score = 204 bits (518), Expect = 9e-51, Method: Composition-based stats.
Identities = 89/227 (39%), Positives = 123/227 (54%), Gaps = 19/227 (8%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++A K+GMT +++ G +PVTVL C V +T++ +GY A+QVG GE K +
Sbjct: 1 MKKAILATKVGMTQIFDENGVLVPVTVLQAGPCVVTQVKTVENDGYDAIQVGFGEKKERI 60
Query: 61 VSKP----------------MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
+K G N +PK EFR+ D +G+ F
Sbjct: 61 TTKDVSGKKVIRNPHGAGKAEVGHAKKANTTPKTFYREFRLD-DCAQYELGAEIKADVFA 119
Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
G +DVT T GKG++G +KRH + HG S HR GS G PGRVFK KKM
Sbjct: 120 EGDKIDVTAKTKGKGYAGGLKRHGLKSGPSGHG-SKYHRHAGSNGSATTPGRVFKGKKMP 178
Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
G MG RVT++NLEVV +D + +ILVKG VPG KK S ++++D+ K
Sbjct: 179 GHMGSVRVTIQNLEVVKIDVENDVILVKGAVPGPKK-SLVMIKDTVK 224
>gi|115400825|ref|XP_001216001.1| 60S ribosomal protein L9, mitochondrial precursor [Aspergillus
terreus NIH2624]
gi|114191667|gb|EAU33367.1| 60S ribosomal protein L9, mitochondrial precursor [Aspergillus
terreus NIH2624]
Length = 335
Score = 204 bits (518), Expect = 9e-51, Method: Composition-based stats.
Identities = 107/217 (49%), Positives = 139/217 (64%), Gaps = 3/217 (1%)
Query: 1 MRSGVVARKLGMTCVYNI-EGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
+R+G VA K GMT VY+ GRRI TVL LD QVV H+T ++GY AVQVGAG
Sbjct: 113 LRTGAVAIKKGMTGVYDAATGRRIACTVLQLDRVQVVAHKTRPQHGYYAVQVGAGWKHPS 172
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
NV+K + G FS+ VSPK+ +FEFRV+ + LLPVG S+F GQ VD T GKG
Sbjct: 173 NVTKSLLGHFSAHGVSPKRHVFEFRVRDEAGLLPVGRDIPASWFREGQFVDARSTTKGKG 232
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ-DPGRVFKNKKMAGRMGGNRVTVKNLE 178
F+G MKRH FGG +HGVS++HRS GS G Q RV+ KKMAG MG + TV+NL+
Sbjct: 233 FAGVMKRHGFGGQDRSHGVSLTHRSMGSAGPSQGGGSRVYPGKKMAGNMGNEQNTVQNLK 292
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
V+ VD + G+++V+G V G K + ++D+ K
Sbjct: 293 VLKVDPENGIVVVQGAVSGP-KGCVVRIQDAIKKPWP 328
>gi|91216910|ref|ZP_01253874.1| 50S ribosomal protein L3 [Psychroflexus torquis ATCC 700755]
gi|91185071|gb|EAS71450.1| 50S ribosomal protein L3 [Psychroflexus torquis ATCC 700755]
Length = 204
Score = 204 bits (518), Expect = 9e-51, Method: Composition-based stats.
Identities = 77/207 (37%), Positives = 119/207 (57%), Gaps = 3/207 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT +++ G+ IP TV+ C V RT + +GY A+Q+G + KN
Sbjct: 1 MSGLIGKKIGMTSIFDENGKNIPCTVIEAGPCVVTQVRTNEVDGYEALQLGFDDKSDKNA 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+K G F S K+K+ EF+ K++ +G + F + VDV+ + GKGF
Sbjct: 61 TKADLGHFKKAGSSVKRKVIEFQGFKEE--YKLGDHITVDLFKENEFVDVSATSKGKGFQ 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRH F G + THG R+ GS G P R+FK KM G+MG +V V+NL V+
Sbjct: 119 GVVKRHGFAGSQRTHGQQSMLRAPGSVGAASYPARIFKGMKMGGQMGSQKVKVQNLRVLK 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRD 208
V ++ LI++KGCVPG N+++ ++
Sbjct: 179 VVPEKNLIVIKGCVPG-HNNTYVTIQK 204
>gi|224510783|pdb|3FIN|E Chain E, T. Thermophilus 70s Ribosome In Complex With Mrna, Trnas
And Ef-Tu.Gdp.Kirromycin Ternary Complex, Fitted To A
6.4 A Cryo-Em Map. This File Contains The 50s Subunit
Length = 205
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 91/212 (42%), Positives = 124/212 (58%), Gaps = 7/212 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ K+GMT ++ + R +PVTV+ C VV RT +K+GY AVQ+G K V
Sbjct: 1 MKGILGVKVGMTRIFRDD-RAVPVTVILAGPCPVVQRRTPEKDGYTAVQLGFLPQNPKRV 59
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
++P++G F+ V P + L E R + G + F G+ VDVTG + G+GF+
Sbjct: 60 NRPLKGHFAKAGVEPVRILREIRDFNPE-----GDTVTVEIFKPGERVDVTGTSKGRGFA 114
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR NF G +HG HR GS G R+ PGRV+K KKMAG G RVTV NLEVV
Sbjct: 115 GVMKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGKKMAGHYGAERVTVMNLEVVD 174
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
V + L+LVKG VPG ++VR++ K+A
Sbjct: 175 VIPEENLLLVKGAVPGP-NGGLVIVRETKKAA 205
>gi|296875404|ref|ZP_06899478.1| 50S ribosomal protein L3 [Streptococcus parasanguinis ATCC 15912]
gi|312866990|ref|ZP_07727201.1| 50S ribosomal protein L3 [Streptococcus parasanguinis F0405]
gi|319945835|ref|ZP_08020085.1| 50S ribosomal protein L3 [Streptococcus australis ATCC 700641]
gi|296433597|gb|EFH19370.1| 50S ribosomal protein L3 [Streptococcus parasanguinis ATCC 15912]
gi|311097472|gb|EFQ55705.1| 50S ribosomal protein L3 [Streptococcus parasanguinis F0405]
gi|319747900|gb|EFW00144.1| 50S ribosomal protein L3 [Streptococcus australis ATCC 700641]
Length = 208
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 88/214 (41%), Positives = 128/214 (59%), Gaps = 6/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY A+QVG + +
Sbjct: 1 MTKGILGKKVGMTQIFTEAGELIPVTVIEATPNVVLQVKTVETDGYNAIQVGFDDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + E K+ + L VG+ + F G +VDVTG + GKGF
Sbjct: 61 SNKPAKGHVAKANTAPKRFIRE---FKNVEGLEVGAEITVDTFEAGDIVDVTGTSKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFK K +AGRMGG+RVT++NLEVV
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGDRVTIQNLEVV 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V ++ +IL+KG VPGAKK S I ++ + K+
Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKAGK 208
>gi|295093643|emb|CBK82734.1| LSU ribosomal protein L3P [Coprococcus sp. ART55/1]
Length = 227
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 87/230 (37%), Positives = 123/230 (53%), Gaps = 19/230 (8%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++A K+GMT +++ G PVTVL C V +T++ +GY A+QVG GE K +
Sbjct: 1 MKKAILATKVGMTQIFDENGVLTPVTVLQAGPCVVTQIKTVENDGYDAIQVGFGEKKERV 60
Query: 61 VSKP----------------MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
+K G +PK EFR++ + +G+ F
Sbjct: 61 TTKDVSGKKVIRNPHGAGKAEVGHAKKAGTTPKAFYREFRLENTAE-YELGAEIKADVFA 119
Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
G +DVT + GKG++G +KRH + HG S HR GS G PGRVFK KKM
Sbjct: 120 AGDKIDVTAKSKGKGYAGGLKRHGLKSGPSGHG-SKYHRHAGSNGSATTPGRVFKGKKMP 178
Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
G MG RVT++NLEVV +D + +ILVKG VPG KK S ++++D+ KS
Sbjct: 179 GHMGSVRVTIQNLEVVKIDVENNVILVKGAVPGPKK-SLVMIKDTVKSGK 227
>gi|256819982|ref|YP_003141261.1| 50S ribosomal protein L3 [Capnocytophaga ochracea DSM 7271]
gi|315225401|ref|ZP_07867215.1| 50S ribosomal protein L3 [Capnocytophaga ochracea F0287]
gi|256581565|gb|ACU92700.1| ribosomal protein L3 [Capnocytophaga ochracea DSM 7271]
gi|314944674|gb|EFS96709.1| 50S ribosomal protein L3 [Capnocytophaga ochracea F0287]
Length = 205
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 81/208 (38%), Positives = 126/208 (60%), Gaps = 4/208 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT +++ G+ IP T++ C V RT + +GY A+Q+G + K
Sbjct: 1 MSGLIGKKVGMTSIFDENGKNIPCTIIEAGPCVVTQVRTKEVDGYDALQLGFDDKAEKRA 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+K G F S KKK+ EF+ +D+ +G + +FT G+ VD+TG++ GKGF
Sbjct: 61 TKAELGHFKKAGTSVKKKVVEFQGFEDN--YKLGDTITVDFFTEGEFVDITGVSKGKGFQ 118
Query: 122 GAMKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G ++RH F G + THG R+ GS G P RVFK +MAGRMG +VTV+NL+V+
Sbjct: 119 GVVRRHGFGGVGQTTHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGAEKVTVQNLKVL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
V ++ L++VKGC+PG KN+++ +
Sbjct: 179 KVVAEKNLLVVKGCIPG-HKNAYVTIHK 205
>gi|289550143|ref|YP_003471047.1| LSU ribosomal protein L3p (L3e) [Staphylococcus lugdunensis
HKU09-01]
gi|289179675|gb|ADC86920.1| LSU ribosomal protein L3p (L3e) [Staphylococcus lugdunensis
HKU09-01]
Length = 220
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 93/223 (41%), Positives = 123/223 (55%), Gaps = 11/223 (4%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK- 59
M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+QVG + +
Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60
Query: 60 -------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
+KP G +PK+ + EFR D+ VG S F G ++DVT
Sbjct: 61 KDAKSNKYATKPAEGHAKKAGTAPKRFIREFRNVNVDE-YEVGQEVSVDTFEAGDIIDVT 119
Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
G++ GKGF GA+KRH HG S HR+ GS G D RVFK +K GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHGQARGPMAHG-SHFHRAPGSVGMASDASRVFKGQKAPGRMGGNTV 178
Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
TV+NLEVV VD + G+ILVKG VPGAKK + ++ S K
Sbjct: 179 TVQNLEVVQVDTENGVILVKGNVPGAKKG-LVEIKSSIKKGNK 220
>gi|55821905|ref|YP_140347.1| 50S ribosomal protein L3 [Streptococcus thermophilus LMG 18311]
gi|55823821|ref|YP_142262.1| 50S ribosomal protein L3 [Streptococcus thermophilus CNRZ1066]
gi|81820218|sp|Q5LXR1|RL3_STRT1 RecName: Full=50S ribosomal protein L3
gi|81820383|sp|Q5M2B3|RL3_STRT2 RecName: Full=50S ribosomal protein L3
gi|55737890|gb|AAV61532.1| 50S ribosomal protein L3 [Streptococcus thermophilus LMG 18311]
gi|55739806|gb|AAV63447.1| 50S ribosomal protein L3 [Streptococcus thermophilus CNRZ1066]
Length = 208
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 92/214 (42%), Positives = 130/214 (60%), Gaps = 6/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + +
Sbjct: 1 MTKGILGKKVGMTQIFTEAGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EF+ + L VGS + F G +VDVTG + GKGF
Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFKNIEG---LEVGSEITVDIFEAGDVVDVTGTSKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIV 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V ++ +IL+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAAK 208
>gi|170729700|ref|YP_001775133.1| 50S ribosomal protein L3 [Xylella fastidiosa M12]
gi|226730591|sp|B0U5A7|RL3_XYLFM RecName: Full=50S ribosomal protein L3
gi|167964493|gb|ACA11503.1| 50S ribosomal protein L3 [Xylella fastidiosa M12]
Length = 215
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 99/209 (47%), Positives = 130/209 (62%), Gaps = 2/209 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G V RK GM+ V+ +GR IPVT++ +VV +T D +GY A+QV G + V+K
Sbjct: 7 GFVGRKAGMSRVFLEDGRSIPVTLIEATANRVVQIKTSDVDGYDAIQVTVGSRRSVLVNK 66
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
P G F+ V + L+EFRV+K VGS S F VGQ VD+ G+T GKGF G
Sbjct: 67 PESGHFAKAKVEAGRGLWEFRVEKTQLGSYSVGSEVGLSIFAVGQKVDIQGITKGKGFQG 126
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRHNF ATHG S+SHR+ GS G RQ PGRVF KKM+G MG R +V+NLEV+ +
Sbjct: 127 TIKRHNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVRQSVQNLEVIKI 186
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
D +R LI V+G +PGA +L+R + K
Sbjct: 187 DVERFLIAVRGAIPGAS-GGDVLIRSASK 214
>gi|296827944|ref|XP_002851250.1| 54S ribosomal protein L9 [Arthroderma otae CBS 113480]
gi|238838804|gb|EEQ28466.1| 54S ribosomal protein L9 [Arthroderma otae CBS 113480]
Length = 303
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 103/217 (47%), Positives = 143/217 (65%), Gaps = 3/217 (1%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
+R+G +A K GMT +Y+ G R P TVL LD QV+ H+TL+KNGY AVQVG+G K
Sbjct: 76 LRTGALAIKKGMTAIYDPETGVRTPCTVLQLDGAQVISHKTLEKNGYCAVQVGSGFKSEK 135
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
NV++PM G FS+ VSPK + EFRV+ + LLPVG V + +F GQ VDV + G G
Sbjct: 136 NVTRPMLGHFSTNGVSPKLYIHEFRVKDETGLLPVGEVINADWFQEGQYVDVRSNSRGMG 195
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ-DPGRVFKNKKMAGRMGGNRVTVKNLE 178
F+GAMK+ F G +HGVS++HRS GST Q RV+ KKM GRMG ++VT+++L+
Sbjct: 196 FAGAMKKWGFHGQDRSHGVSLTHRSLGSTAPSQGGGSRVYPGKKMPGRMGNHQVTLQSLK 255
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
V+ VD ++G+++VKG V G K + ++D+ K
Sbjct: 256 VLKVDAEKGIVVVKGSVAGP-KGRCVKIQDAIKKPWP 291
>gi|297588191|ref|ZP_06946835.1| 50S ribosomal protein L3 [Finegoldia magna ATCC 53516]
gi|297574880|gb|EFH93600.1| 50S ribosomal protein L3 [Finegoldia magna ATCC 53516]
Length = 209
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 89/209 (42%), Positives = 128/209 (61%), Gaps = 3/209 (1%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ +K+GMT ++N +G +PVTV+ V +T +K GY A+QVG E K K+V++P
Sbjct: 4 ILGKKIGMTQIFNEDGSVVPVTVIEAGPMVVTQIKTKEKEGYNAIQVGYIEKKEKHVNQP 63
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
MRG F VS KK L EF++ DD +G F G +VDV G++ GKG G++
Sbjct: 64 MRGHFGKAGVSFKKHLQEFKI-GDDQQFNLGDEIKLDIFQDGDVVDVIGISKGKGTQGSI 122
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
RHN+ HG S SHR G+ P RVFK +K +G+MG +RVTV+NL++V VD+
Sbjct: 123 VRHNYSRGPMGHG-SKSHRVAGARSAGSYPARVFKGRKGSGKMGHDRVTVQNLKIVKVDN 181
Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+R L+L+KG VPG K + VR++ KS
Sbjct: 182 ERNLLLIKGAVPG-NKGGVVTVREAIKSK 209
>gi|163786190|ref|ZP_02180638.1| 50S ribosomal protein L3 [Flavobacteriales bacterium ALC-1]
gi|159878050|gb|EDP72106.1| 50S ribosomal protein L3 [Flavobacteriales bacterium ALC-1]
Length = 205
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 84/206 (40%), Positives = 121/206 (58%), Gaps = 4/206 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT +++ G+ IP TV+ C V RT + +GY A+Q+G +A K+
Sbjct: 1 MSGLIGKKIGMTSIFDENGKNIPCTVIEAGPCIVTQVRTEEVDGYSALQLGFDDATEKSA 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+K G S K+K+ EF+ ++ +G + FT G+ VDV G + GKGF
Sbjct: 61 TKADLGHAKKAGTSVKRKVVEFKGFGEE--YKLGDAITVEQFTEGEFVDVAGTSKGKGFQ 118
Query: 122 GAMKRHNFG-GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH F +ATHG R+ GS G P RVFK KMAGRMGG V V+NL V
Sbjct: 119 GVVKRHGFAGVGQATHGQHNRLRAPGSIGAASYPARVFKGMKMAGRMGGETVKVQNLRVY 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
V ++ L++VKGCVPG KNS++++
Sbjct: 179 KVVPEKNLLVVKGCVPG-HKNSYVII 203
>gi|327301767|ref|XP_003235576.1| 50S ribosomal protein L3 [Trichophyton rubrum CBS 118892]
gi|326462928|gb|EGD88381.1| 50S ribosomal protein L3 [Trichophyton rubrum CBS 118892]
Length = 302
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 100/217 (46%), Positives = 143/217 (65%), Gaps = 3/217 (1%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
+R+G +A K GMT +Y+ G R P TVL LD QV+ H+T +KNGY AVQVG+G +
Sbjct: 75 LRTGALAIKKGMTAIYDPETGVRTPCTVLQLDGAQVISHKTFEKNGYCAVQVGSGLKNER 134
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
NV++PM G FS+ VSPK+ + EFRV+ + LLP+G V + +F GQ VDV + G G
Sbjct: 135 NVTRPMLGHFSANGVSPKRHIHEFRVKDETGLLPIGEVINADWFQEGQYVDVRSNSRGMG 194
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ-DPGRVFKNKKMAGRMGGNRVTVKNLE 178
F+GAMK+ F G +HGVS++HRS GST Q RV+ KKM GRMG ++VT+++L+
Sbjct: 195 FAGAMKKWGFHGQDRSHGVSLTHRSLGSTAPSQGGGSRVYPGKKMPGRMGNHQVTLQSLK 254
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
V+ VD ++G+++VKG V G K + ++D+ K
Sbjct: 255 VLKVDAEKGIVVVKGGVAGP-KGRCVKIQDAIKKPWP 290
>gi|297567284|ref|YP_003686256.1| 50S ribosomal protein L3 [Meiothermus silvanus DSM 9946]
gi|296851733|gb|ADH64748.1| 50S ribosomal protein L3 [Meiothermus silvanus DSM 9946]
Length = 212
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 100/217 (46%), Positives = 130/217 (59%), Gaps = 7/217 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ K+GMT V+ R +PVTV+ C VV RT DK+GY AVQ+G K + V
Sbjct: 1 MKGILGTKIGMTQVW-KNDRAVPVTVILAGPCPVVQRRTPDKDGYEAVQLGFRPQKAQRV 59
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP++G F+ V P + L E R + G + F G+ VDVTG + G+GF
Sbjct: 60 NKPLKGHFAKAGVEPVRYLKEIRGFSPE-----GDTVTVEIFAAGEKVDVTGTSKGRGFQ 114
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR NF G ATHG HR GS G R+ PGRV+K KKMAGRMGG RVTV+NLEVV
Sbjct: 115 GVMKRWNFAGGNATHGAHKVHRHPGSIGNRKTPGRVYKGKKMAGRMGGERVTVQNLEVVD 174
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
V + LILVKG VPGA + ++VR++ ++ G
Sbjct: 175 VVPEENLILVKGAVPGA-NGTLVVVRETVRTPAKQGG 210
>gi|227538718|ref|ZP_03968767.1| ribosomal protein L3 [Sphingobacterium spiritivorum ATCC 33300]
gi|300770251|ref|ZP_07080130.1| 50S ribosomal protein L3 [Sphingobacterium spiritivorum ATCC 33861]
gi|227241637|gb|EEI91652.1| ribosomal protein L3 [Sphingobacterium spiritivorum ATCC 33300]
gi|300762727|gb|EFK59544.1| 50S ribosomal protein L3 [Sphingobacterium spiritivorum ATCC 33861]
Length = 205
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 98/206 (47%), Positives = 131/206 (63%), Gaps = 4/206 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT +YN EG+ IP TV+ C V RT DK+GY AVQ+G GEAK KN
Sbjct: 1 MSGIIGKKVGMTSLYNEEGKNIPCTVIEAGPCVVTQIRTEDKDGYSAVQLGFGEAKEKNT 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+ ++G F+ N +PK+KL EF+ D+ L G V + F G+ VDV G + GKGF
Sbjct: 61 TASLKGHFAKANTTPKRKLVEFKTFPDEKQL--GDVVDVTIFEEGEYVDVVGTSKGKGFQ 118
Query: 122 GAMKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G MKRH F G ATHG R+ GS G P RVFK +MAGR GG+RV V+NL+V+
Sbjct: 119 GVMKRHGFGGVGGATHGQHNRLRAPGSLGASSWPSRVFKGMRMAGRTGGDRVKVQNLQVL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
V ++ LI+V G +PGA K S+++V
Sbjct: 179 KVYAEQNLIVVSGSIPGA-KGSYVIV 203
>gi|153854970|ref|ZP_01996183.1| hypothetical protein DORLON_02189 [Dorea longicatena DSM 13814]
gi|149752467|gb|EDM62398.1| hypothetical protein DORLON_02189 [Dorea longicatena DSM 13814]
Length = 226
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 84/228 (36%), Positives = 122/228 (53%), Gaps = 19/228 (8%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE----- 55
M+ ++A K+GMT ++N +G PVTVL C V +T++ +GY AVQVG +
Sbjct: 1 MKKAILATKVGMTQIFNEDGTLTPVTVLQAGPCAVTQIKTVENDGYEAVQVGFVDKKDKI 60
Query: 56 -----------AKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
V+K +G F+ V+ K+ + EF+ ++ +G F
Sbjct: 61 INKDKGGKKEIVHRHGVTKAEQGHFAKAGVTGKRYVREFK-FENASEYELGQEIKADIFA 119
Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
G +D T ++ GKGF GA+KRHN HG S HR GS G DP +VFK K M
Sbjct: 120 AGDKIDATAISKGKGFQGAIKRHNQSRGPMAHG-SKYHRHAGSNGACSDPSKVFKGKHMP 178
Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
G MG ++TV+NL VV VD + L+LVKG VPG KK S + ++++ K+
Sbjct: 179 GHMGSKKITVQNLVVVRVDAENNLLLVKGSVPGPKK-SLVTIKEAVKA 225
>gi|46199630|ref|YP_005297.1| 50S ribosomal protein L3 [Thermus thermophilus HB27]
gi|55981661|ref|YP_144958.1| 50S ribosomal protein L3 [Thermus thermophilus HB8]
gi|1710559|sp|P52860|RL3_THETH RecName: Full=50S ribosomal protein L3
gi|62287202|sp|Q5SHN8|RL3_THET8 RecName: Full=50S ribosomal protein L3
gi|81830573|sp|Q72I04|RL3_THET2 RecName: Full=50S ribosomal protein L3
gi|116668236|pdb|2J01|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Mrna, Trna And Paromomycin (Part 2 Of 4).
This File Contains The 50s Subunit From Molecule I.
gi|116668297|pdb|2J03|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Mrna, Trna And Paromomycin (Part 4 Of 4).
This File Contains The 50s Subunit From Molecule Ii.
gi|119389737|pdb|2HGJ|E Chain E, Crystal Structure Of The 70s Thermus Thermophilus Ribosome
Showing How The 16s 3'-End Mimicks Mrna E And P Codons.
This Entry 2hgj Contains 50s Ribosomal Subunit. The 30s
Ribosomal Subunit Can Be Found In Pdb Entry 2hgi.
gi|119389794|pdb|2HGQ|E Chain E, Crystal Structure Of The 70s Thermus Thermophilus Ribosome
With Translocated And Rotated Shine-Dalgarno Duplex.
This Entry 2hgq Contains 50s Ribosomal Subunit. The 30s
Ribosomal Subunit Can Be Found In Pdb Entry 2hgp.
gi|119389850|pdb|2HGU|E Chain E, 70s T.Th. Ribosome Functional Complex With Mrna And E- And
P-Site Trnas At 4.5a. This Entry 2hgu Contains 50s
Ribosomal Subunit. The 30s Ribosomal Subunit Can Be
Found In Pdb Entry 2hgr.
gi|149240888|pdb|1VSA|C Chain C, Crystal Structure Of A 70s Ribosome-Trna Complex Reveals
Functional Interactions And Rearrangements. This File,
1vsa, Contains The 50s Ribosome Subunit. 30s Ribosome
Subunit Is In The File 2ow8
gi|157836523|pdb|2V47|E Chain E, Structure Of The Ribosome Recycling Factor Bound To The
Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And
Trna-Fmet (Part 2 Of 4). This File Contains The 50s
Subunit For Molecule 1.
gi|157836579|pdb|2V49|E Chain E, Structure Of The Ribosome Recycling Factor Bound To The
Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And
Trna-Fmet (Part 4 Of 4). This File Contains The 50s
Subunit Of Molecule 2.
gi|160285430|pdb|1VSP|C Chain C, Interactions And Dynamics Of The Shine-Dalgarno Helix In
The 70s Ribosome. This File, 1vsp, Contains The 50s
Ribosome Subunit. 30s Ribosome Subunit Is In The File
2qnh
gi|209156521|pdb|3D5B|E Chain E, Structural Basis For Translation Termination On The 70s
Ribosome. This File Contains The 50s Subunit Of One 70s
Ribosome. The Entire Crystal Structure Contains Two 70s
Ribosomes As Described In Remark 400.
gi|209156575|pdb|3D5D|E Chain E, Structural Basis For Translation Termination On The 70s
Ribosome. This File Contains The 50s Subunit Of The
Second 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes As Described In Remark 400.
gi|211938857|pdb|2JL6|E Chain E, Insights Into Translational Termination From The Structure
Of Rf2 Bound To The Ribosome (Part 2 Of 4). This File
Contains The 50s Subunit.
gi|211938915|pdb|2JL8|E Chain E, Insights Into Translational Termination From The Structure
Of Rf2 Bound To The Ribosome (Part 4 Of 4). This File
Contains The 50s Subunit.
gi|218766798|pdb|3F1F|E Chain E, Crystal Structure Of A Translation Termination Complex
Formed With Release Factor Rf2. This File Contains The
50s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes As Described In
Remark 400.
gi|218766854|pdb|3F1H|E Chain E, Crystal Structure Of A Translation Termination Complex
Formed With Release Factor Rf2. This File Contains The
50s Subunit Of The Second 70s Ribosome. The Entire
Crystal Structure Contains Two 70s Ribosomes As
Described In Remark 400.
gi|226887438|pdb|2WDI|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A-Site Trna,
Deacylated P-Site Trna, And E-Site Trna. This File
Contains The 50s Subunit For Molecule I.
gi|226887470|pdb|2WDJ|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A-Site Trna,
Deacylated P-Site Trna, And E-Site Trna. This File
Contains The 50s Subunit For Molecule Ii.
gi|226887527|pdb|2WDL|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A- And P-Site
Trnas, And E-Site Trna. This File Contains The 50s
Subunit For Molecule I.
gi|226887584|pdb|2WDN|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A- And P-Site
Trnas, And E-Site Trna. This File Contains The 50s
Subunit For Molecule Ii.
gi|237823568|pdb|2WH2|E Chain E, Insights Into Translational Termination From The Structure
Of Rf2 Bound To The Ribosome
gi|237823627|pdb|2WH4|E Chain E, Insights Into Translational Termination From The Structure
Of Rf2 Bound To The Ribosome
gi|260100014|pdb|3HUX|E Chain E, Structure Of Ef-P Bound To The 70s Ribosome; This File
Contains The 50s Subunit For Molecule I.
gi|260100070|pdb|3HUZ|E Chain E, Structure Of Ef-P Bound To The 70s Ribosome; This File
Contains The 50s Subunit For Molecule Ii.
gi|261824523|pdb|2WRJ|E Chain E, The Structure Of The Ribosome With Elongation Factor G
Trapped In The Post-Translocational State (Part 2 Of 4).
gi|261824585|pdb|2WRL|E Chain E, The Structure Of The Ribosome With Elongation Factor G
Trapped In The Post-Translocational State. (Part 4 Of
4).
gi|261824648|pdb|2WRO|E Chain E, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
And Trna (Part 2 Of 4).
gi|261824707|pdb|2WRR|E Chain E, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
And Trna (Part 4 Of 4).
gi|281307195|pdb|3KIR|E Chain E, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Precleavage State; Part 2 Of 4)
gi|281307253|pdb|3KIT|E Chain E, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Precleavage State; Part 4 Of 4)
gi|281307311|pdb|3KIW|E Chain E, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Postcleavage State; Part 2 Of 4)
gi|281307369|pdb|3KIY|E Chain E, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Postcleavage State; Part 4 Of 4)
gi|288965633|pdb|3KNI|E Chain E, The Structures Of Viomycin Bound To The 70s Ribosome. This
File Contains The 50s Subunit For Molecule I
gi|288965665|pdb|3KNK|E Chain E, The Structures Of Viomycin Bound To The 70s Ribosome. This
File Contains The 50s Subunit For Molecule Ii.
gi|288965697|pdb|3KNM|E Chain E, The Structures Of Capreomycin Bound To The 70s Ribosome.
Thi Contains The 50s Subunit For Molecule I.
gi|288965729|pdb|3KNO|E Chain E, The Structures Of Capreomycin Bound To The 70s Ribosome.
Thi Contains The 50s Subunit For Molecule Ii
gi|294979477|pdb|3I8F|E Chain E, Elongation Complex Of The 70s Ribosome With Three Trnas
And Entry 3i8f Contains 50s Ribosomal Subunit. The 30s
Ribosoma Can Be Found In Pdb Entry 3i8g. Molecule B In
The Same Asym Unit Is Deposited As 3i8g (30s) And 3i8f
(50s).
gi|294979557|pdb|3I8I|E Chain E, Elongation Complex Of The 70s Ribosome With Three Trnas
And Entry 3i8i Contains 50s Ribosomal Subnit. The 30s
Ribosomal Can Be Found In Pdb Entry 3i8h. Molecule A In
The Same Asym Unit Is Deposited As 3i8f (50s) And 3i8g
(30s).
gi|294979615|pdb|3I9C|E Chain E, Initiation Complex Of 70s Ribosome With Two Trnas And
Mrna. 3i9c Contains 50s Ribosomal Subunit Of Molecule B.
The 30s Subunit Can Be Found In Pdb Entry 3i9b. Molecule
A In The S Asymmetric Unit Is Deposited As 3i9d (30s)
And 3i9e (50s)
gi|294979669|pdb|3I9E|E Chain E, Initiation Complex Of 70s Ribosome With Two Trnas And
Mrna. 3i9e Contains 50s Ribosomal Subunit Of Molecule A.
The 30s Subunit Can Be Found In Pdb Entry 3i9d. Molecule
B In The S Asymmetric Unit Is Deposited As 3i9b (30s)
And 3i9c (50s)
gi|295982114|pdb|2X9S|E Chain E, Structure Of The 70s Ribosome Bound To Release Factor 2
And A Substrate Analog Provides Insights Into Catalysis
Of Peptide Release
gi|295982173|pdb|2X9U|E Chain E, Structure Of The 70s Ribosome Bound To Release Factor 2
And A Substrate Analog Provides Insights Into Catalysis
Of Peptide Release
gi|300508632|pdb|3MRZ|D Chain D, Recognition Of The Amber Stop Codon By Release Factor Rf1.
This Entry 3mrz Contains 50s Ribosomal Subunit. The 30s
Ribosomal Subunit Can Be Found In Pdb Entry 3ms0.
Molecule A In The Same Asymmetric Unit Is Deposited As
3mr8 (50s) And 3ms1 (30s).
gi|300508687|pdb|3MS1|D Chain D, Recognition Of The Amber Stop Codon By Release Factor Rf1.
This Entry 3ms1 Contains 50s Ribosomal Subunit. The 30s
Ribosomal Subunit Can Be Found In Pdb Entry 3mr8.
Molecule B In The Same Asymmetric Unit Is Deposited As
3mrz (50s) And 3ms0 (30s).
gi|307568001|pdb|2XG0|E Chain E, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
70s Ribosome (Part 2 Of 4)
gi|307568059|pdb|2XG2|E Chain E, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
70s Ribosome (Part 4 Of 4)
gi|309320289|pdb|3OH5|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Chloramphenicol. This File Contains The
50s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320319|pdb|3OH7|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Chloramphenicol. This File Contains The
50s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320391|pdb|3OHJ|E Chain E, Structure Of The Thermus Thermophilus Ribosome Complexed
With Erythromycin. This File Contains The 50s Subunit Of
One 70s Ribosome. The Entire Crystal Structure Contains
Two 70s Ribosomes.
gi|309320421|pdb|3OHK|E Chain E, Structure Of The Thermus Thermophilus Ribosome Complexed
With Erythromycin. This File Contains The 50s Subunit Of
One 70s Ribosome. The Entire Crystal Structure Contains
Two 70s Ribosomes.
gi|309320472|pdb|3OHZ|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Azithromycin. This File Contains The 50s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320523|pdb|3OI1|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Azithromycin. This File Contains The 50s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320574|pdb|3OI3|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Telithromycin. This File Contains The 50s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320625|pdb|3OI5|E Chain E, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Telithromycin. This File Contains The 50s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|312207713|pdb|2XQE|E Chain E, The Structure Of Ef-Tu And Aminoacyl-Trna Bound To The 70s
Ribosome With A Gtp Analog
gi|313754037|pdb|2XTG|E Chain E, Trna Tranlocation On The 70s Ribosome: The Pre-
Translocational Translocation Intermediate Ti(Pre)
gi|313754095|pdb|2XUX|E Chain E, Trna Tranlocation On The 70s Ribosome: The Post-
Translocational Translocation Intermediate Ti(Post)
gi|325533442|pdb|2Y0V|E Chain E, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A
Near-Cognate Codon On The 70s Ribosome
gi|325533501|pdb|2Y0X|E Chain E, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A
Near-Cognate Codon On The 70s Ribosome
gi|325533560|pdb|2Y0Z|E Chain E, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
A Near-Cognate Codon On The 70s Ribosome
gi|325533619|pdb|2Y11|E Chain E, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A
Cognate Codon On The 70s Ribosome.
gi|325533678|pdb|2Y13|E Chain E, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
A Near-Cognate Codon On The 70s Ribosome
gi|325533737|pdb|2Y15|E Chain E, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
A Cognate Codon On The 70s Ribosome.
gi|325533796|pdb|2Y17|E Chain E, Ef-Tu Complex 3
gi|325533855|pdb|2Y19|E Chain E, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A
Cognate Codon On The 70s Ribosome.
gi|1143612|emb|CAA86408.1| ribosomal protein L3 [Thermus thermophilus]
gi|46197256|gb|AAS81670.1| LSU ribosomal protein L3P [Thermus thermophilus HB27]
gi|55773074|dbj|BAD71515.1| 50S ribosomal protein L3 [Thermus thermophilus HB8]
Length = 206
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 91/213 (42%), Positives = 124/213 (58%), Gaps = 7/213 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ K+GMT ++ + R +PVTV+ C VV RT +K+GY AVQ+G K V
Sbjct: 1 MKGILGVKVGMTRIFRDD-RAVPVTVILAGPCPVVQRRTPEKDGYTAVQLGFLPQNPKRV 59
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
++P++G F+ V P + L E R + G + F G+ VDVTG + G+GF+
Sbjct: 60 NRPLKGHFAKAGVEPVRILREIRDFNPE-----GDTVTVEIFKPGERVDVTGTSKGRGFA 114
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR NF G +HG HR GS G R+ PGRV+K KKMAG G RVTV NLEVV
Sbjct: 115 GVMKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGKKMAGHYGAERVTVMNLEVVD 174
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V + L+LVKG VPG ++VR++ K+A
Sbjct: 175 VIPEENLLLVKGAVPGP-NGGLVIVRETKKAAK 206
>gi|330997365|ref|ZP_08321216.1| 50S ribosomal protein L3 [Paraprevotella xylaniphila YIT 11841]
gi|329570739|gb|EGG52455.1| 50S ribosomal protein L3 [Paraprevotella xylaniphila YIT 11841]
Length = 205
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 80/204 (39%), Positives = 119/204 (58%), Gaps = 4/204 (1%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT V++ +G+ +P TV+ C V ++++K+GY AVQ+G EAK KN +
Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKSVEKDGYAAVQLGFQEAKEKNTTA 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P+ G F +PK+ L EF + + L +G + F VDV G + GKGF G
Sbjct: 63 PLMGHFKKAGTTPKRHLAEFTGFEQE--LNLGDTVTVDMFEGTVYVDVIGTSKGKGFQGV 120
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G + THG R GS G P +VFK +M G+MG RVT +NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGLRMGGQMGNERVTAQNLQVLKV 180
Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
+ L+L+KG VPG K S +++
Sbjct: 181 IPEHNLLLIKGSVPG-YKGSIVII 203
>gi|124026708|ref|YP_001015823.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. NATL1A]
gi|166233176|sp|A2C4Z9|RL3_PROM1 RecName: Full=50S ribosomal protein L3
gi|123961776|gb|ABM76559.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. NATL1A]
Length = 218
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 79/217 (36%), Positives = 128/217 (58%), Gaps = 3/217 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGM+ +++ +GR +PVT++ C++ ++ D +GY AVQ+G + K
Sbjct: 1 MSLGILGKKLGMSQLFDDQGRAVPVTLIEAGPCRITQLKSADTDGYAAVQIGFQLIREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP +G + + L E+RV+ +G+ + F GQ VDV+G T+G+GF
Sbjct: 61 INKPSKGHLAKSGNDLLRHLREYRVEN-SSEFELGASITVDDFEKGQKVDVSGDTMGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G KRH F +HG S +HR GS G PGRV+ K+MAGRMGG +VT + LE++
Sbjct: 120 AGYQKRHGFSRGPMSHG-SKNHRLPGSIGAGTTPGRVYPGKRMAGRMGGKKVTTRALEIL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
+D L++VKG VPG S + +R + + V+ +
Sbjct: 179 KIDTNHNLLVVKGSVPGKP-GSLLNIRPAKRVGVSIQ 214
>gi|121706456|ref|XP_001271490.1| 50S ribosomal protein L3 [Aspergillus clavatus NRRL 1]
gi|119399638|gb|EAW10064.1| 50S ribosomal protein L3 [Aspergillus clavatus NRRL 1]
Length = 297
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 98/223 (43%), Positives = 140/223 (62%), Gaps = 3/223 (1%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
+R+G +A K GMT VY+ G+RI TVL LD QVV H+T ++GY AVQ+GAG
Sbjct: 72 LRTGAIAIKKGMTAVYDTETGKRIACTVLQLDRVQVVSHKTRQRHGYYAVQLGAGWKHPS 131
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
NV+K + G FS+ VSPK+ ++EFR++ + L+PVG + + S+F GQ VD + GKG
Sbjct: 132 NVTKSLLGHFSTHGVSPKRHIYEFRIKDESGLVPVGEMINASWFQEGQYVDARSNSKGKG 191
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ-DPGRVFKNKKMAGRMGGNRVTVKNLE 178
F+G MKRH F G +HGVS++HRS GS G Q RV+ KKMAG MG + TV+NL+
Sbjct: 192 FAGVMKRHGFHGQDRSHGVSLTHRSLGSAGPSQGGGSRVYPGKKMAGNMGNEQNTVQNLK 251
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
++ VD + G+++V G V G K + ++D+ K +
Sbjct: 252 ILKVDPENGIVVVNGSVSGP-KGCVVRIQDAIKKPWPEVVPAA 293
>gi|73661972|ref|YP_300753.1| 50S ribosomal protein L3 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|82581593|sp|Q49ZG8|RL3_STAS1 RecName: Full=50S ribosomal protein L3
gi|72494487|dbj|BAE17808.1| 50S ribosomal protein L3 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 219
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 90/222 (40%), Positives = 125/222 (56%), Gaps = 11/222 (4%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK- 59
M G++ RK+GMT V+ G IPVTV+ ++ ++ + +GY A+QVG + +
Sbjct: 1 MTKGILGRKIGMTQVFGENGDLIPVTVVEASQNVILQKKSEEIDGYNAIQVGYEDKQAYK 60
Query: 60 -------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
+KP G +PK+ + EFR D+ VG S + F G ++DVT
Sbjct: 61 KDSRSSKYANKPAEGHAKKAGTAPKRFIREFRNVNVDE-YEVGQEVSVNTFEAGDVIDVT 119
Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
G++ GKGF GA+KRHN +HG S HR+ GS G D RVFK +KM GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHNQARGPMSHG-SHFHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178
Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
TV+NLEVV +D + +ILVKG VPG KK ++ + S K
Sbjct: 179 TVQNLEVVQIDAENNVILVKGNVPGPKKG-FVEITSSIKGNK 219
>gi|255083651|ref|XP_002508400.1| predicted protein [Micromonas sp. RCC299]
gi|226523677|gb|ACO69658.1| predicted protein [Micromonas sp. RCC299]
Length = 259
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 96/212 (45%), Positives = 128/212 (60%), Gaps = 2/212 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
RSG +A K GMT +N G R+P+TVL +D+C+V +T +K GY A+Q+GAG K K +
Sbjct: 14 RSGAIAVKCGMTAEWNEHGVRVPLTVLWIDDCRVTQVKTQEKEGYTALQLGAGSKKAKRL 73
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
++ RG F P D +LPVG+ S+F+ GQ VD+ G TIGKGF
Sbjct: 74 NRSERGHFI-AGDVPFSAELTEFRVSPDAILPVGTAIGASHFSAGQYVDIQGRTIGKGFQ 132
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR F GL A+HG + HR+HGS G QDPGRV+K KKMAGRMG TV+++ V
Sbjct: 133 GPMKRWGFSGLPASHGTTKKHRAHGSIGNSQDPGRVWKGKKMAGRMGNRTRTVQSVFVYK 192
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD R L+ VKG VPG ++ + D+ +
Sbjct: 193 VDADRNLLYVKGQVPGKAGR-FLKITDALRKP 223
>gi|154505169|ref|ZP_02041907.1| hypothetical protein RUMGNA_02682 [Ruminococcus gnavus ATCC 29149]
gi|153794648|gb|EDN77068.1| hypothetical protein RUMGNA_02682 [Ruminococcus gnavus ATCC 29149]
Length = 242
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 95/229 (41%), Positives = 129/229 (56%), Gaps = 20/229 (8%)
Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
M+ ++A K+GMT ++N E G IPVTVL C V +T++ +GY AVQVG + K K
Sbjct: 16 MKKAILATKVGMTQIFNEETGVLIPVTVLQAGPCVVTQVKTVENDGYKAVQVGFVDKKEK 75
Query: 60 NVSKPM----------------RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103
V+K +G F VS K+ + EFR ++ + + F
Sbjct: 76 IVTKDKSGKKEIAHRNGVTKAEKGHFDKAGVSGKRYVKEFR-FENAEEYTLAQEIKADIF 134
Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163
G VD T ++ GKGF GA+KRHN THG S HR GS G DP +VFK KKM
Sbjct: 135 AAGDKVDATAISKGKGFQGAIKRHNQSRGPMTHG-SKFHRHAGSNGAASDPSKVFKGKKM 193
Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
G+MGG ++TV+NLEVV VD + L+LVKG VPG KK S I ++++ K+
Sbjct: 194 PGQMGGKKITVQNLEVVRVDAENNLLLVKGSVPGPKK-SLITIKETVKA 241
>gi|146323695|ref|XP_752224.2| 50S ribosomal protein L3 [Aspergillus fumigatus Af293]
gi|129557582|gb|EAL90186.2| 50S ribosomal protein L3 [Aspergillus fumigatus Af293]
gi|159124862|gb|EDP49979.1| 50S ribosomal protein L3 [Aspergillus fumigatus A1163]
Length = 317
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 101/217 (46%), Positives = 135/217 (62%), Gaps = 3/217 (1%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
+R+G +A K GMT VY+ G+RI TVL LD QVV H+T +GY AVQVGAG
Sbjct: 92 LRTGAIAIKKGMTAVYDAETGKRIACTVLQLDRVQVVSHKTRQTHGYNAVQVGAGWKHPS 151
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
NV+K + G FS+ VSPK+ ++EFRV+ + LLPVG + +F GQ VD + GKG
Sbjct: 152 NVTKSLLGHFSTNGVSPKRHVYEFRVKDESGLLPVGQTINADWFQEGQYVDARSYSKGKG 211
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ-DPGRVFKNKKMAGRMGGNRVTVKNLE 178
F+G MKRH F G +HGVS++HRS GS G Q RV+ KKMAG MG + TV+NL+
Sbjct: 212 FAGVMKRHGFHGQDRSHGVSLTHRSLGSAGPSQGGGSRVYPGKKMAGNMGNEQNTVQNLK 271
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
V+ VD G+++V G V G K + ++D+ K
Sbjct: 272 VLKVDADNGIVVVNGSVSGP-KGCVVRIQDAIKKPWP 307
>gi|312889367|ref|ZP_07748921.1| LSU ribosomal protein L3P [Mucilaginibacter paludis DSM 18603]
gi|311298244|gb|EFQ75359.1| LSU ribosomal protein L3P [Mucilaginibacter paludis DSM 18603]
Length = 205
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 90/206 (43%), Positives = 127/206 (61%), Gaps = 4/206 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT +++ G+ IP TV+ C V +++D +GY AVQ+ GE K KN
Sbjct: 1 MSGIIGKKVGMTSIFDEAGKNIPCTVIEAGPCVVTHVKSVDTDGYAAVQLAYGEKKEKNT 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
S P++G F +PK+KL EF+ +D+ L G V + F+ G VDV G + GKGF
Sbjct: 61 SGPLKGHFQKAGTTPKRKLVEFKTFEDEKSL--GDVITVDLFSAGDFVDVVGTSKGKGFQ 118
Query: 122 GAMKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH F G THG R+ GS G P RVFK +MAG MG +RV V+NL+VV
Sbjct: 119 GVVKRHGFGGVGMQTHGQHNRLRAPGSLGASSWPSRVFKGMRMAGHMGNSRVKVQNLQVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
V ++ LI+VKG +PGA K S+++V
Sbjct: 179 KVYPEQNLIVVKGSIPGA-KGSFVIV 203
>gi|222152265|ref|YP_002561440.1| 50S ribosomal protein L3 [Streptococcus uberis 0140J]
gi|254803695|sp|B9DSV0|RL3_STRU0 RecName: Full=50S ribosomal protein L3
gi|222113076|emb|CAR40439.1| 50S ribosomal protein L3 [Streptococcus uberis 0140J]
Length = 208
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 92/214 (42%), Positives = 131/214 (61%), Gaps = 6/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + +
Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EF+ + L VGS + F+ G +VDVTG + GKGF
Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFKNIEG---LEVGSEITVESFSAGDVVDVTGTSKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIV 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V ++ +IL+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAAK 208
>gi|126657988|ref|ZP_01729140.1| 50S ribosomal protein L3 [Cyanothece sp. CCY0110]
gi|126620626|gb|EAZ91343.1| 50S ribosomal protein L3 [Cyanothece sp. CCY0110]
Length = 212
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 84/211 (39%), Positives = 119/211 (56%), Gaps = 4/211 (1%)
Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
M G++ KLGMT ++ E G IPVTV+ C + +T + +GY A+Q+G E + K
Sbjct: 1 MAVGLLGTKLGMTQIFEEESGLAIPVTVVQAGPCTITQIKTAETDGYTAIQIGYLEVREK 60
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
N++KP G SP + L E+RV +D +G F G LVD+ G ++G+G
Sbjct: 61 NLTKPELGHLKKAEASPLRHLKEYRV-EDTASYTLGEAVKADIFNAGDLVDIAGTSMGRG 119
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G KRHNF THG S +HR GSTG PGRV+ KKMAG+ G T ++LEV
Sbjct: 120 FAGYQKRHNFKRGSMTHG-SKNHRLPGSTGAGTTPGRVYPGKKMAGQYGAVTTTTRHLEV 178
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
V VD +R L+L++G VPG + + +
Sbjct: 179 VKVDAERNLLLIRGAVPGKP-GGLLNITPAK 208
>gi|237717399|ref|ZP_04547880.1| 50S ribosomal protein L3 [Bacteroides sp. D1]
gi|262406164|ref|ZP_06082714.1| 50S ribosomal protein L3 [Bacteroides sp. 2_1_22]
gi|294644059|ref|ZP_06721836.1| 50S ribosomal protein L3 [Bacteroides ovatus SD CC 2a]
gi|294807315|ref|ZP_06766128.1| 50S ribosomal protein L3 [Bacteroides xylanisolvens SD CC 1b]
gi|298483064|ref|ZP_07001245.1| 50S ribosomal protein L3 [Bacteroides sp. D22]
gi|229443382|gb|EEO49173.1| 50S ribosomal protein L3 [Bacteroides sp. D1]
gi|262357039|gb|EEZ06129.1| 50S ribosomal protein L3 [Bacteroides sp. 2_1_22]
gi|292640583|gb|EFF58824.1| 50S ribosomal protein L3 [Bacteroides ovatus SD CC 2a]
gi|294445480|gb|EFG14134.1| 50S ribosomal protein L3 [Bacteroides xylanisolvens SD CC 1b]
gi|295085428|emb|CBK66951.1| LSU ribosomal protein L3P [Bacteroides xylanisolvens XB1A]
gi|298270808|gb|EFI12388.1| 50S ribosomal protein L3 [Bacteroides sp. D22]
Length = 205
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 83/204 (40%), Positives = 124/204 (60%), Gaps = 4/204 (1%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G + K K+ +K
Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYAAVQLGFQDKKEKHTTK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P+ G F V+PK+ L EF ++ + L +G + F VDV G + GKGF G
Sbjct: 63 PLMGHFKRAGVTPKRHLAEF--KEFETELNLGDTITVEMFNDASFVDVVGTSKGKGFQGV 120
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G +ATHG R GS G P +VFK +M G++GG+RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQATHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180
Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
L+LVKG +PG K S +L+
Sbjct: 181 IADHNLLLVKGSIPGC-KGSIVLI 203
>gi|218245140|ref|YP_002370511.1| 50S ribosomal protein L3 [Cyanothece sp. PCC 8801]
gi|257058165|ref|YP_003136053.1| 50S ribosomal protein L3 [Cyanothece sp. PCC 8802]
gi|226725160|sp|B7K335|RL3_CYAP8 RecName: Full=50S ribosomal protein L3
gi|218165618|gb|ACK64355.1| ribosomal protein L3 [Cyanothece sp. PCC 8801]
gi|256588331|gb|ACU99217.1| ribosomal protein L3 [Cyanothece sp. PCC 8802]
Length = 212
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 85/211 (40%), Positives = 120/211 (56%), Gaps = 4/211 (1%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
M G++ KLGMT +++ G IPVTV+ C V +T D +GY A+QVG E K K
Sbjct: 1 MAVGILGTKLGMTQIFDQETGMAIPVTVVQAGPCTVTQVKTPDTDGYTAIQVGYHEVKEK 60
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
++K G ++ P + L E+R+ D +G F G LVDV+G ++G+G
Sbjct: 61 ALTKAEIGHLKKIDAPPLRHLKEYRLD-DSSQYQLGDAIKADIFNPGDLVDVSGKSMGRG 119
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G KRHNF THG S +HR GSTG PGRV+ K+MAG+ G +VT+++L V
Sbjct: 120 FAGYQKRHNFKRGNMTHG-SKNHRLPGSTGAGTTPGRVYPGKRMAGQYGATQVTIRHLTV 178
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
V VD R LILVKG +PG + + + +
Sbjct: 179 VRVDSDRNLILVKGAIPGKP-GTLLNITPAK 208
>gi|228478031|ref|ZP_04062642.1| 50S ribosomal protein L3 [Streptococcus salivarius SK126]
gi|312862472|ref|ZP_07722715.1| 50S ribosomal protein L3 [Streptococcus vestibularis F0396]
gi|322374045|ref|ZP_08048579.1| 50S ribosomal protein L3 [Streptococcus sp. C150]
gi|322515867|ref|ZP_08068809.1| 50S ribosomal protein L3 [Streptococcus vestibularis ATCC 49124]
gi|228250211|gb|EEK09464.1| 50S ribosomal protein L3 [Streptococcus salivarius SK126]
gi|311102115|gb|EFQ60315.1| 50S ribosomal protein L3 [Streptococcus vestibularis F0396]
gi|321277011|gb|EFX54082.1| 50S ribosomal protein L3 [Streptococcus sp. C150]
gi|322125654|gb|EFX96981.1| 50S ribosomal protein L3 [Streptococcus vestibularis ATCC 49124]
Length = 208
Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats.
Identities = 93/214 (43%), Positives = 130/214 (60%), Gaps = 6/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + +
Sbjct: 1 MTKGILGKKVGMTQIFTEAGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EF+ + L VGS + F G +VDVTG + GKGF
Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFKNIEG---LEVGSEITVDTFEAGDVVDVTGTSKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLEVV
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEVV 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V ++ +IL+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAAK 208
>gi|126662264|ref|ZP_01733263.1| 50S ribosomal protein L3 [Flavobacteria bacterium BAL38]
gi|126625643|gb|EAZ96332.1| 50S ribosomal protein L3 [Flavobacteria bacterium BAL38]
Length = 205
Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats.
Identities = 86/208 (41%), Positives = 126/208 (60%), Gaps = 4/208 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ RK+GMT +++ G+ IP TV+ C V RT + +GY A+Q+G + K
Sbjct: 1 MSGLIGRKIGMTSIFDENGKNIPCTVIECGPCVVTQVRTNEVDGYSAIQLGFDDKAEKRS 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
K G F + KKK+ EF+ +++ +G V + F G+ VDV G++ GKGF
Sbjct: 61 IKAELGHFKKAGTAAKKKVVEFKGFEEE--YKLGDVIAVDLFAEGEFVDVLGVSKGKGFQ 118
Query: 122 GAMKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH F G +ATHG R+ GS G P RVFK +MAGRMGG+ VTV+NL V+
Sbjct: 119 GVVKRHGFGGVGQATHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGGDNVTVQNLRVL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
V ++ L++VKGCVPG KNS+++++
Sbjct: 179 KVVGEKNLLVVKGCVPG-HKNSYVIIQK 205
>gi|212528688|ref|XP_002144501.1| 50S ribosomal protein L3 [Penicillium marneffei ATCC 18224]
gi|210073899|gb|EEA27986.1| 50S ribosomal protein L3 [Penicillium marneffei ATCC 18224]
Length = 300
Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats.
Identities = 102/218 (46%), Positives = 140/218 (64%), Gaps = 3/218 (1%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
+R+G++A K GMT +Y+ G+R P TVL LD CQVV H+T+DK+GY AVQVGAG K +
Sbjct: 72 LRTGLLAIKKGMTGLYDPETGKRTPCTVLQLDRCQVVSHKTMDKHGYFAVQVGAGFKKPQ 131
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
++K + G FS ++PK+ + EFRV+ LL +GS S ++F VGQ VD T GKG
Sbjct: 132 RLTKALLGHFSVNEIAPKRYVHEFRVKDQSGLLEIGSTLSANWFQVGQFVDARSNTKGKG 191
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ-DPGRVFKNKKMAGRMGGNRVTVKNLE 178
F+G MKRH F G +HGVS++HRS GS G Q RV+ KKMAG MG + T++NL+
Sbjct: 192 FAGVMKRHGFHGQDRSHGVSLTHRSMGSAGPSQGGGSRVYPGKKMAGNMGNVQNTLQNLK 251
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
V+ VD G+I+V G V G K + ++D+ K
Sbjct: 252 VLEVDPVNGIIVVNGSVSGP-KGCLVQLQDALKKPWPT 288
>gi|315056921|ref|XP_003177835.1| 54S ribosomal protein L9 [Arthroderma gypseum CBS 118893]
gi|311339681|gb|EFQ98883.1| 54S ribosomal protein L9 [Arthroderma gypseum CBS 118893]
Length = 304
Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats.
Identities = 102/217 (47%), Positives = 143/217 (65%), Gaps = 3/217 (1%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
+R+G +A K GMT +Y+ G R P TVL LD QVV H+T +KNGY AVQVG+G +
Sbjct: 77 LRTGALAIKKGMTAIYDPETGVRTPCTVLQLDGAQVVSHKTFEKNGYCAVQVGSGFKYER 136
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
NV+KPM G FS+ VSPK+ + EFRV+ + LLP+G V + +F GQ VDV + G G
Sbjct: 137 NVTKPMLGHFSANGVSPKRHIHEFRVKDEAGLLPIGEVINADWFQEGQYVDVRSNSRGMG 196
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ-DPGRVFKNKKMAGRMGGNRVTVKNLE 178
F+GAMK+ F G +HGVS++HRS GST Q RV+ KKM GRMG ++VT+++L+
Sbjct: 197 FAGAMKKWGFHGQDRSHGVSLTHRSLGSTAPSQGGGSRVYPGKKMPGRMGNHQVTLQSLK 256
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
V+ VD ++G+++VKG V G K + ++D+ K
Sbjct: 257 VLKVDAEKGIVVVKGGVAGP-KGRCVKIQDAIKKPWP 292
>gi|50913439|ref|YP_059411.1| 50S ribosomal protein L3 [Streptococcus pyogenes MGAS10394]
gi|73917496|sp|Q5XED5|RL3_STRP6 RecName: Full=50S ribosomal protein L3
gi|50902513|gb|AAT86228.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS10394]
Length = 208
Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats.
Identities = 94/214 (43%), Positives = 131/214 (61%), Gaps = 6/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + +
Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EF+ + L VG+ S F G +VDVTG + GKGF
Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFKNIEG---LEVGAELSVEQFEAGDVVDVTGTSKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFKNK++AGRMGGNRVTV+NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTVQNLEIV 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V ++ +ILVKG VPGAKK S I ++ + K+A
Sbjct: 176 QVILEKNVILVKGNVPGAKK-SLITIKSAVKAAK 208
>gi|325288578|ref|YP_004264759.1| LSU ribosomal protein L3P [Syntrophobotulus glycolicus DSM 8271]
gi|324963979|gb|ADY54758.1| LSU ribosomal protein L3P [Syntrophobotulus glycolicus DSM 8271]
Length = 209
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 85/212 (40%), Positives = 127/212 (59%), Gaps = 4/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ +G+ IPVTV+ C V+ +T +GY A+QVG E + +
Sbjct: 1 MSKGILGKKIGMTQIFLEDGKLIPVTVVEAGPCYVLQKKTQASDGYNAIQVGFSEIRERL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP G F V+V P + + EFR D + +G + F+ G +DV G + GKGF
Sbjct: 61 VNKPKLGHFKKVDVKPSRFIREFRTD-DVESFEIGQTINADVFSTGDKIDVVGTSRGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G KRH HG HR+ + P RVFK +++ GR+GG RVTV+NLE+V
Sbjct: 120 AGMHKRHGGRRGPMGHGSKYHHRTGSMGA--KGPARVFKGRELPGRLGGERVTVQNLEIV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + LIL+KGCVPGAKK S ++++ + K+
Sbjct: 178 RVDADKNLILIKGCVPGAKK-SLLILKKTSKN 208
>gi|89891148|ref|ZP_01202656.1| 50S ribosomal protein L3 (rplC) [Flavobacteria bacterium BBFL7]
gi|89516792|gb|EAS19451.1| 50S ribosomal protein L3 (rplC) [Flavobacteria bacterium BBFL7]
Length = 205
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 84/208 (40%), Positives = 125/208 (60%), Gaps = 4/208 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ RK+GMT +Y+ G+ +P T++ C V RT + +GY A+Q+G + KN
Sbjct: 1 MSGLIGRKIGMTSIYDENGKNMPCTIIEAGPCVVTQVRTEEVDGYSALQLGFDDKSDKNA 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SK +G F KKK+ EF+ D++ +G S FT G+ +DV+G + GKGF
Sbjct: 61 SKAAQGHFKKAGTGVKKKVVEFQGF--DEVYKLGDAISVDIFTEGEFIDVSGTSKGKGFQ 118
Query: 122 GAMKRHNFG-GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH F +ATHG R+ GS G P RVFK +MAG+MG +V V+NL V+
Sbjct: 119 GVVKRHGFAGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGQMGNEKVKVENLRVL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
V ++ L++VKGCVPG KNS+++++
Sbjct: 179 KVVPEKNLLVVKGCVPG-HKNSYVILQK 205
>gi|157828860|ref|YP_001495102.1| 50S ribosomal protein L3 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933587|ref|YP_001650376.1| 50S ribosomal protein L3 [Rickettsia rickettsii str. Iowa]
gi|238650972|ref|YP_002916828.1| 50S ribosomal protein L3 [Rickettsia peacockii str. Rustic]
gi|166234587|sp|A8GT69|RL3_RICRS RecName: Full=50S ribosomal protein L3
gi|189029476|sp|B0BUR0|RL3_RICRO RecName: Full=50S ribosomal protein L3
gi|259709734|sp|C4K2H9|RL3_RICPU RecName: Full=50S ribosomal protein L3
gi|157801341|gb|ABV76594.1| 50S ribosomal protein L3 [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165908674|gb|ABY72970.1| LSU ribosomal protein L3P [Rickettsia rickettsii str. Iowa]
gi|238625070|gb|ACR47776.1| 50S ribosomal protein L3 [Rickettsia peacockii str. Rustic]
Length = 215
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 113/212 (53%), Positives = 164/212 (77%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL+K+GY A+ +G + K+
Sbjct: 1 MRTGIIAQKIGMTSVFNDKGERISLTLVKVDDCQVVGHKTLEKHGYNALVIGVKDKKISR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KPMR F++ +SPK KL EFR+ + ++ + + + +FT GQ VD+T TIGKGF
Sbjct: 61 VTKPMRQVFANAKISPKTKLKEFRISE-ENFIDIAASLEVDHFTAGQFVDITATTIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++
Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIF 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+VD +R LI+++G +PG KNS++ V+D+ K
Sbjct: 180 AVDKERKLIMIQGSIPG-HKNSYLSVKDAIKK 210
>gi|308233852|ref|ZP_07664589.1| LSU ribosomal protein L3P [Atopobium vaginae DSM 15829]
gi|328943560|ref|ZP_08241025.1| 50S ribosomal protein L3 [Atopobium vaginae DSM 15829]
gi|327491529|gb|EGF23303.1| 50S ribosomal protein L3 [Atopobium vaginae DSM 15829]
Length = 206
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 88/209 (42%), Positives = 122/209 (58%), Gaps = 3/209 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M + ++ RK+GMT V++ +PVTV+ C V +T +GY AVQ+G G+ K K+
Sbjct: 1 MVTTILGRKIGMTQVWDENDNIVPVTVIQAGPCTVSQVKTKATDGYDAVQIGFGDIKAKH 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP+ G F + NV P + L E RV+ +D G V + F VDV G + GKGF
Sbjct: 61 VNKPLAGHFKAHNVEPARYLAEVRVENGED-HKCGDVVTVKDFADVAAVDVIGTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR NF HG S + R GS G P RV K MAG MG RVTVKNL++V
Sbjct: 120 QGTIKRWNFSCGPKAHG-SRNQREPGSIGQCSYPARVRKGLHMAGHMGDERVTVKNLKLV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
+D+++ L+LVKG VPG KN+ + +R +
Sbjct: 179 RIDEEQNLMLVKGAVPGG-KNALVSIRMA 206
>gi|315652354|ref|ZP_07905346.1| 50S ribosomal protein L3 [Eubacterium saburreum DSM 3986]
gi|315485477|gb|EFU75867.1| 50S ribosomal protein L3 [Eubacterium saburreum DSM 3986]
Length = 225
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 81/227 (35%), Positives = 114/227 (50%), Gaps = 16/227 (7%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++ARK+GMT +++ G IPVTVL C V +T + +GY +VQV G+ + K
Sbjct: 1 MKKAILARKVGMTQIFDENGVLIPVTVLLAGPCVVTQVKTEENDGYNSVQVAYGQIRTKL 60
Query: 61 VSKPMRGFFSSVNVSP--------------KKKLFEFRVQKDDDLLPVGSVFSPSYFTVG 106
V+K G + + + ++ + F G
Sbjct: 61 VNKAKAGHLAKAGIEKTVVEKGDKKREVFTAGRFIREFKFENASEYAPKAEIKVDIFAAG 120
Query: 107 QLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGR 166
VD T ++ GKGF GA+KRH +HG S HR GS G DP VFK K M G
Sbjct: 121 DKVDATAVSKGKGFQGAIKRHGQSRGPMSHG-SKFHRHQGSNGSSSDPSHVFKGKGMPGH 179
Query: 167 MGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
MG RVT +NLE+V VD R LILVKG +PG+KK + I ++++ K
Sbjct: 180 MGAKRVTTQNLEIVRVDADRNLILVKGSMPGSKK-ALITLKETVKKK 225
>gi|319944795|ref|ZP_08019059.1| 50S ribosomal protein L3 [Lautropia mirabilis ATCC 51599]
gi|319742044|gb|EFV94467.1| 50S ribosomal protein L3 [Lautropia mirabilis ATCC 51599]
Length = 217
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 82/206 (39%), Positives = 120/206 (58%), Gaps = 2/206 (0%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
M ++ +G IPVTV+ + +V ++++K+GY AVQ+ GE + V+ G ++
Sbjct: 1 MMRIFTDDGESIPVTVIDVSGNRVSQVKSVEKDGYSAVQLVYGERRASRVNAAEAGHYAK 60
Query: 72 VNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130
V EF V + +P G+V +F VGQ +DV G + GKGF+G +KRHNFG
Sbjct: 61 AGVQAGTVAAEFHVSPERAAEVPAGTVLGADHFVVGQYIDVQGTSQGKGFAGTIKRHNFG 120
Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190
RA+HG S SHR GS G QDPGRVF ++M+G+MG TV+NL V +D +RGL+L
Sbjct: 121 SQRASHGNSRSHRVPGSIGMAQDPGRVFPGQRMSGQMGNVTRTVQNLVVERIDTERGLLL 180
Query: 191 VKGCVPGAKKNSWILVRDSFKSAVNC 216
V+G VPG+ + + S K +
Sbjct: 181 VRGAVPGSAGGHLV-ITPSVKRRLKP 205
>gi|317507409|ref|ZP_07965143.1| 50S ribosomal protein L3 [Segniliparus rugosus ATCC BAA-974]
gi|316254294|gb|EFV13630.1| 50S ribosomal protein L3 [Segniliparus rugosus ATCC BAA-974]
Length = 212
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 90/211 (42%), Positives = 121/211 (57%), Gaps = 2/211 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ KLGMT V++ R +PVTV+ V RT +++ Y AVQ+ G+ + V+K
Sbjct: 2 GLLGAKLGMTQVFDERNRVVPVTVIRTGVNIVTQIRTPERDKYSAVQLAFGQIDPRKVNK 61
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P+ G F V+P++ L E R+ +D VG S F G LVDVTG + GKGF+G
Sbjct: 62 PLTGQFEKAGVTPRRHLAELRL-EDVSGYEVGQQLDVSVFADGDLVDVTGTSKGKGFAGT 120
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
MKRH F G A HG HR GS G PGRVFK +MAGRMG + T +NL V VD
Sbjct: 121 MKRHGFKGQGAAHGAHKVHRRPGSIGACAFPGRVFKGTRMAGRMGNAKTTTQNLTVFRVD 180
Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
+ G++L+KG VPG + + VR + K V
Sbjct: 181 PEAGVLLIKGAVPG-RDGGLVFVRSAVKKGV 210
>gi|118586994|ref|ZP_01544426.1| ribosomal protein L3, BL3 [Oenococcus oeni ATCC BAA-1163]
gi|118432616|gb|EAV39350.1| ribosomal protein L3, BL3 [Oenococcus oeni ATCC BAA-1163]
Length = 240
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 78/220 (35%), Positives = 115/220 (52%), Gaps = 6/220 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ +G IPVTV+ V+ +T + +GY A+Q+G + +
Sbjct: 1 MTKGILGRKVGMTQVFTDKGELIPVTVIEALPNVVLQVKTPETDGYSALQLGVFDKRKIA 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + +PK+ + E R + D G F G+ VDV G+T G GF
Sbjct: 61 ANKPEQGHAKKASAAPKRYVREIRDAQGD--YKQGDQVKVDVFAAGEYVDVQGITKGHGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G++KR HG S HR GS G +VFK K + G+MGG+ T + L V
Sbjct: 119 QGSIKRLGQSRGPMAHG-SRYHRRPGSMGAI--INKVFKGKLLPGQMGGDLRTAQKLLVA 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
VD LIL+KG VPGA K S++ ++ + K K K+
Sbjct: 176 GVDPANNLILIKGNVPGANK-SFVTIKSTVKPFKASKIKL 214
>gi|42559703|sp|Q9PE76|RL3_XYLFA RecName: Full=50S ribosomal protein L3
Length = 215
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 100/209 (47%), Positives = 129/209 (61%), Gaps = 2/209 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G V RK GM+ V+ +G IPVT++ +VV +T D +GY AVQV G + V+K
Sbjct: 7 GFVGRKAGMSRVFLEDGCSIPVTLIEATANRVVQIKTSDVDGYDAVQVTVGSRRSVLVNK 66
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
P G F+ V + L+EFRV+K VGS S F VGQ VD+ G+T GKGF G
Sbjct: 67 PESGHFAKAKVEAGRGLWEFRVEKTQLGSYSVGSEVGLSIFAVGQKVDIQGITKGKGFQG 126
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRHNF ATHG S+SHR+ GS G RQ PGRVF KKM+G MG R +V+NLEVV +
Sbjct: 127 TIKRHNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVRQSVQNLEVVKI 186
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
D +R LI V+G +PGA +L+R + K
Sbjct: 187 DVERCLIAVRGAIPGAS-GGDVLIRSASK 214
>gi|29348136|ref|NP_811639.1| 50S ribosomal protein L3 [Bacteroides thetaiotaomicron VPI-5482]
gi|253569590|ref|ZP_04847000.1| 50S ribosomal protein L3 [Bacteroides sp. 1_1_6]
gi|298386181|ref|ZP_06995738.1| 50S ribosomal protein L3 [Bacteroides sp. 1_1_14]
gi|42559628|sp|Q8A476|RL3_BACTN RecName: Full=50S ribosomal protein L3
gi|29340039|gb|AAO77833.1| 50S ribosomal protein L3 [Bacteroides thetaiotaomicron VPI-5482]
gi|251841609|gb|EES69690.1| 50S ribosomal protein L3 [Bacteroides sp. 1_1_6]
gi|298261409|gb|EFI04276.1| 50S ribosomal protein L3 [Bacteroides sp. 1_1_14]
Length = 205
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 81/204 (39%), Positives = 124/204 (60%), Gaps = 4/204 (1%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G + K K+ +K
Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYAAVQLGFQDKKEKHTTK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P+ G F V+PK+ L EF ++ + L +G + F VDV G + GKGF G
Sbjct: 63 PLMGHFKRAGVTPKRHLAEF--KEFETELNLGDTITVEMFNDATFVDVVGTSKGKGFQGV 120
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G +ATHG R GS G P +VFK +M G++GG+RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQATHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180
Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
L+L+KG +PG K S +++
Sbjct: 181 IADHNLLLIKGSIPGC-KGSIVII 203
>gi|229587009|ref|YP_002845510.1| 50S ribosomal protein L3 [Rickettsia africae ESF-5]
gi|259709733|sp|C3PPA7|RL3_RICAE RecName: Full=50S ribosomal protein L3
gi|228022059|gb|ACP53767.1| 50S ribosomal protein L3 [Rickettsia africae ESF-5]
Length = 215
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 114/212 (53%), Positives = 164/212 (77%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL+K+GY A+ VG + K+
Sbjct: 1 MRTGIIAQKIGMTSVFNDKGERISLTLVKVDDCQVVGHKTLEKHGYNALVVGVKDKKISR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KPMR F++ +SPK KL EFR+ + ++ + + + +FT GQ VD+T TIGKGF
Sbjct: 61 VTKPMRQVFANAKISPKTKLKEFRISE-ENFIDIAASLEVDHFTAGQFVDITATTIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++
Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIF 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+VD +R LI+++G +PG KNS++ V+D+ K
Sbjct: 180 AVDKERKLIMIQGSIPG-HKNSYLSVKDAIKK 210
>gi|306832547|ref|ZP_07465687.1| 50S ribosomal protein L3 [Streptococcus bovis ATCC 700338]
gi|304425305|gb|EFM28431.1| 50S ribosomal protein L3 [Streptococcus bovis ATCC 700338]
Length = 208
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 92/214 (42%), Positives = 130/214 (60%), Gaps = 6/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + +
Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EF+ + L VG + + F G +VDVTG + GKGF
Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFKNIEG---LEVGQEITVNTFEAGDVVDVTGTSKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLEVV
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEVV 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V ++ +IL+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAAK 208
>gi|157804035|ref|YP_001492584.1| 50S ribosomal protein L3 [Rickettsia canadensis str. McKiel]
gi|166234586|sp|A8EZL6|RL3_RICCK RecName: Full=50S ribosomal protein L3
gi|157785298|gb|ABV73799.1| 50S ribosomal protein L3 [Rickettsia canadensis str. McKiel]
Length = 215
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 111/212 (52%), Positives = 163/212 (76%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL+K+GY A+ +G + K+
Sbjct: 1 MRTGIIAQKIGMTSVFNDKGERIALTLVKVDDCQVVGHKTLEKHGYNALVIGVKDKKISR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KPM+ F++ +SPK KL EFR+ + ++ + V + +F GQ VD+T +TIGKGF
Sbjct: 61 VTKPMKQVFANAKISPKTKLKEFRISE-ENFIDVAASLEVDHFMAGQFVDITAITIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++
Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIF 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+VD R LI+++G +PG KNS++ ++D+ K
Sbjct: 180 AVDKDRKLIMIQGSIPG-HKNSYLSIKDAIKK 210
>gi|15837754|ref|NP_298442.1| 50S ribosomal protein L3 [Xylella fastidiosa 9a5c]
gi|9106116|gb|AAF83962.1|AE003950_12 50S ribosomal protein L3 [Xylella fastidiosa 9a5c]
Length = 210
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 100/209 (47%), Positives = 129/209 (61%), Gaps = 2/209 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G V RK GM+ V+ +G IPVT++ +VV +T D +GY AVQV G + V+K
Sbjct: 2 GFVGRKAGMSRVFLEDGCSIPVTLIEATANRVVQIKTSDVDGYDAVQVTVGSRRSVLVNK 61
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
P G F+ V + L+EFRV+K VGS S F VGQ VD+ G+T GKGF G
Sbjct: 62 PESGHFAKAKVEAGRGLWEFRVEKTQLGSYSVGSEVGLSIFAVGQKVDIQGITKGKGFQG 121
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRHNF ATHG S+SHR+ GS G RQ PGRVF KKM+G MG R +V+NLEVV +
Sbjct: 122 TIKRHNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVRQSVQNLEVVKI 181
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
D +R LI V+G +PGA +L+R + K
Sbjct: 182 DVERCLIAVRGAIPGAS-GGDVLIRSASK 209
>gi|71902234|ref|ZP_00684241.1| Ribosomal protein L3 [Xylella fastidiosa Ann-1]
gi|71728008|gb|EAO30222.1| Ribosomal protein L3 [Xylella fastidiosa Ann-1]
Length = 215
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 100/209 (47%), Positives = 129/209 (61%), Gaps = 2/209 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G V RK GM+ V+ +G IPVT++ +VV +T D +GY AVQV G + V+K
Sbjct: 7 GFVGRKAGMSRVFLEDGCSIPVTLIEATANRVVQIKTSDVDGYDAVQVTVGSRRSVLVNK 66
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
P G F+ V + L+EFRV+K VGS S F VGQ VD+ G+T GKGF G
Sbjct: 67 PESGHFAKAKVEAGRGLWEFRVEKTQLGSYSVGSEVGLSIFAVGQKVDIQGITKGKGFQG 126
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRHNF ATHG S+SHR+ GS G RQ PGRVF KKM+G MG R +V+NLEV+ +
Sbjct: 127 TIKRHNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVRQSVQNLEVIKI 186
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
D +R LI V+G VPGA +L+R + K
Sbjct: 187 DVERCLIAVRGAVPGAS-GGDVLIRSASK 214
>gi|116628598|ref|YP_821217.1| 50S ribosomal protein L3 [Streptococcus thermophilus LMD-9]
gi|122266808|sp|Q03IF1|RL3_STRTD RecName: Full=50S ribosomal protein L3
gi|116101875|gb|ABJ67021.1| LSU ribosomal protein L3P [Streptococcus thermophilus LMD-9]
gi|312279259|gb|ADQ63916.1| 50S ribosomal protein L3 [Streptococcus thermophilus ND03]
Length = 208
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 92/214 (42%), Positives = 130/214 (60%), Gaps = 6/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + +
Sbjct: 1 MTKGILGKKVGMTQIFTEAGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EF+ + L VGS + F G +VDVTG + GKGF
Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFKNIEG---LEVGSEITVDIFEAGDIVDVTGTSKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIV 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V ++ +IL+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKTAK 208
>gi|309799058|ref|ZP_07693311.1| ribosomal protein L3 [Streptococcus infantis SK1302]
gi|308117293|gb|EFO54716.1| ribosomal protein L3 [Streptococcus infantis SK1302]
Length = 208
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 88/214 (41%), Positives = 128/214 (59%), Gaps = 6/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY A+QVG + +
Sbjct: 1 MTKGILGKKVGMTQIFTEAGELIPVTVIEATPNVVLQVKTVETDGYNAIQVGFDDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + E K+ + L VG+ + F G +VDVTG + GKGF
Sbjct: 61 SNKPAKGHVAKANTAPKRFIRE---FKNVEGLEVGAEITVETFAAGDVVDVTGTSKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFK K +AGRMGG+RVT++NLEVV
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGDRVTIQNLEVV 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V ++ +IL+KG VPGAKK S I ++ + K+
Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAGK 208
>gi|313158234|gb|EFR57636.1| 50S ribosomal protein L3 [Alistipes sp. HGB5]
Length = 204
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 83/206 (40%), Positives = 119/206 (57%), Gaps = 5/206 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT VY+ EG+ IP TV+ C V +T++K+ Y AVQ+ E K+
Sbjct: 1 MSGLIGKKIGMTSVYSAEGKNIPCTVIEAGPCVVTQIKTVEKDTYEAVQIAYDEKSEKHT 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
S + G F +PK+K+ EF+ + +L G + F+ VDVTG++ GKGF
Sbjct: 61 SSSLLGHFKKAGTTPKRKMAEFKGMPEVNL---GDTLTVELFSEEDWVDVTGISKGKGFQ 117
Query: 122 GAMKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH F G THG R GS G P RVFK K++ G+MGG +V V NL V+
Sbjct: 118 GVVKRHGFGGVGGQTHGQHNRQRKPGSLGASSYPSRVFKGKRLPGQMGGEQVKVLNLRVL 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
V + LILVKG +PGA K +++ +
Sbjct: 178 KVIPESNLILVKGSIPGA-KGAYLTI 202
>gi|67458670|ref|YP_246294.1| 50S ribosomal protein L3 [Rickettsia felis URRWXCal2]
gi|75536865|sp|Q4UMS9|RL3_RICFE RecName: Full=50S ribosomal protein L3
gi|67004203|gb|AAY61129.1| 50S ribosomal protein L3 [Rickettsia felis URRWXCal2]
Length = 215
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 113/212 (53%), Positives = 164/212 (77%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL+K+GY A+ +G + K+
Sbjct: 1 MRTGIIAQKIGMTSVFNDKGERISLTLVKVDDCQVVGHKTLEKHGYNALVIGIKDKKISR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KPM+ F++ +SPK KL EFR+ + ++ + + + YFT GQ VD+T TIGKGF
Sbjct: 61 VTKPMKQVFANAKISPKTKLKEFRISE-ENFIDIAASLEVDYFTAGQFVDITATTIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++
Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIF 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+VD +R LI+++G +PG KNS++ V+D+ K
Sbjct: 180 AVDKERKLIMIQGSIPG-HKNSYLSVKDAIKK 210
>gi|227499195|ref|ZP_03929330.1| 50S ribosomal protein L3 [Acidaminococcus sp. D21]
gi|226904642|gb|EEH90560.1| 50S ribosomal protein L3 [Acidaminococcus sp. D21]
Length = 219
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 91/221 (41%), Positives = 133/221 (60%), Gaps = 5/221 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGMT ++ +G +PVTV+ C V+ ++T + +GY A+Q+G G+ K K+
Sbjct: 1 MARGILGKKLGMTQIFEADGTLVPVTVVEAGPCVVLANKTEETDGYNAIQLGFGDIKEKH 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KPM+GFF V+P K + EFR+ + VG + F G LVD G++ GKGF
Sbjct: 61 VNKPMKGFFDKAGVAPVKFVREFRL-AEASEYKVGDKIAADIFAAGDLVDAIGVSRGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTG--CRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
+G ++RHNF HG S SHR GS G GRV K KK+ GR+GG TV+ L
Sbjct: 120 AGTIERHNFARGPMKHG-SKSHREPGSNGPMHSGPGGRVIKGKKLPGRLGGQSATVQRLT 178
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
+ VD +R LI+VKG VPGA +++++RD+ + V K
Sbjct: 179 IAKVDAERNLIMVKGSVPGAA-GTFLMLRDTVRPVVKKADK 218
>gi|172038926|ref|YP_001805427.1| 50S ribosomal protein L3 [Cyanothece sp. ATCC 51142]
gi|254803668|sp|B1WQQ9|RL3_CYAA5 RecName: Full=50S ribosomal protein L3
gi|171700380|gb|ACB53361.1| 50S ribosomal protein L3 [Cyanothece sp. ATCC 51142]
Length = 212
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 85/211 (40%), Positives = 119/211 (56%), Gaps = 4/211 (1%)
Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
M G++ KLGMT ++ E G IPVTV+ C + +T + +GY A+Q+G E K K
Sbjct: 1 MAVGLLGTKLGMTQIFEEESGLAIPVTVVQAGPCTITQIKTAETDGYSAIQIGYLEVKEK 60
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
++KP G V SP + L E+RV D +G F G LVD+ G ++G+G
Sbjct: 61 ALTKPELGHLKKVEASPLRHLKEYRVD-DTATYTLGEAVKADIFNAGDLVDIAGTSMGRG 119
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G KRHNF THG S +HR GSTG PGRV+ KKMAG+ G + T ++L+V
Sbjct: 120 FAGYQKRHNFKRGSMTHG-SKNHRLPGSTGAGTTPGRVYPGKKMAGQYGAVKTTTRHLQV 178
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
V VD +R L+L+KG VPG + + +
Sbjct: 179 VRVDAERNLLLIKGAVPGKP-GGLLNITPAK 208
>gi|193211851|ref|YP_001997804.1| 50S ribosomal protein L3 [Chlorobaculum parvum NCIB 8327]
gi|226725146|sp|B3QR75|RL3_CHLP8 RecName: Full=50S ribosomal protein L3
gi|193085328|gb|ACF10604.1| ribosomal protein L3 [Chlorobaculum parvum NCIB 8327]
Length = 209
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 88/207 (42%), Positives = 122/207 (58%), Gaps = 1/207 (0%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ +K+GMT +YN + +P TV+ C V ++ +K+GY A Q+G GE K V+KP
Sbjct: 4 ILGKKIGMTRLYNNKREAVPCTVIQAGPCFVAQVKSTEKDGYDAYQLGFGERDEKKVTKP 63
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+ G + +P L E L G+ + FT G++VDV G+T GKGF+G +
Sbjct: 64 LAGHYKKAGKTPGYLLSEVSKSLIAGELEAGATVAVDVFTEGEIVDVLGVTKGKGFAGVV 123
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KRHNFGG THG S R+ GS G DP R FK +MAGRMGG TV+NLE+V V
Sbjct: 124 KRHNFGGGSRTHGQSDRLRAPGSVGGSSDPSRTFKGTRMAGRMGGENKTVRNLEIVKVMP 183
Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211
+ LI+VKG VPG KNS++ + + K
Sbjct: 184 ESNLIVVKGAVPGP-KNSYVKIVSTTK 209
>gi|22536243|ref|NP_687094.1| 50S ribosomal protein L3 [Streptococcus agalactiae 2603V/R]
gi|25010133|ref|NP_734528.1| 50S ribosomal protein L3 [Streptococcus agalactiae NEM316]
gi|76786764|ref|YP_328784.1| 50S ribosomal protein L3 [Streptococcus agalactiae A909]
gi|76798231|ref|ZP_00780481.1| ribosomal protein L3 [Streptococcus agalactiae 18RS21]
gi|77406990|ref|ZP_00784005.1| ribosomal protein L3 [Streptococcus agalactiae H36B]
gi|77412293|ref|ZP_00788609.1| ribosomal protein L3 [Streptococcus agalactiae CJB111]
gi|42559639|sp|Q8E2D1|RL3_STRA5 RecName: Full=50S ribosomal protein L3
gi|42559641|sp|Q8E7T8|RL3_STRA3 RecName: Full=50S ribosomal protein L3
gi|109893560|sp|Q3K3W9|RL3_STRA1 RecName: Full=50S ribosomal protein L3
gi|22533063|gb|AAM98966.1|AE014194_11 ribosomal protein L3 [Streptococcus agalactiae 2603V/R]
gi|23094484|emb|CAD45703.1| ribosomal protein L3 [Streptococcus agalactiae NEM316]
gi|76561821|gb|ABA44405.1| ribosomal protein L3 [Streptococcus agalactiae A909]
gi|76586440|gb|EAO62948.1| ribosomal protein L3 [Streptococcus agalactiae 18RS21]
gi|77161683|gb|EAO72678.1| ribosomal protein L3 [Streptococcus agalactiae CJB111]
gi|77174395|gb|EAO77249.1| ribosomal protein L3 [Streptococcus agalactiae H36B]
gi|319743995|gb|EFV96375.1| 50S ribosomal protein L3 [Streptococcus agalactiae ATCC 13813]
Length = 208
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 92/214 (42%), Positives = 131/214 (61%), Gaps = 6/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + +
Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EF+ + L VG+ S F G +VDVTG + GKGF
Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFKNIEG---LEVGAELSVEQFEAGDVVDVTGTSKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFKNK++AGRMGGNRVTV+NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTVQNLEIV 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V ++ ++L+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVVLIKGNVPGAKK-SLITIKSAVKAAK 208
>gi|222150445|ref|YP_002559598.1| 50S ribosomal protein L3 [Macrococcus caseolyticus JCSC5402]
gi|254803679|sp|B9E9J1|RL3_MACCJ RecName: Full=50S ribosomal protein L3
gi|222119567|dbj|BAH16902.1| 50S ribosomal protein L3 [Macrococcus caseolyticus JCSC5402]
Length = 220
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 86/223 (38%), Positives = 121/223 (54%), Gaps = 11/223 (4%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK- 59
M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY ++Q+G + +
Sbjct: 1 MTKGILGRKVGMTQVFGENGELIPVTVVEAAQNVVLQKKTEEVDGYSSIQIGFEDKQAYK 60
Query: 60 -------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
+KP G +PK+ + EFR D + VG + F G +VDVT
Sbjct: 61 ADRKSNKFATKPAEGHAKKAGTAPKRFIREFRNV-DTEAYEVGQEVTVDTFQTGDIVDVT 119
Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
G++ GKGF GA+KRH +HG S HR GS G D +VFK K + GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHGQSRGPMSHG-SRYHRRPGSMGMASDASKVFKGKALPGRMGGNTV 178
Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
T++NLE+V VD + +ILVKG VPG KK + ++ S K
Sbjct: 179 TMQNLEIVKVDAENNVILVKGNVPGPKKG-LVKIQTSIKKGNK 220
>gi|242371896|ref|ZP_04817470.1| 50S ribosomal protein L3 [Staphylococcus epidermidis M23864:W1]
gi|242350403|gb|EES42004.1| 50S ribosomal protein L3 [Staphylococcus epidermidis M23864:W1]
Length = 220
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 94/223 (42%), Positives = 122/223 (54%), Gaps = 11/223 (4%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA------- 53
M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+QVG
Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60
Query: 54 -GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
G K +KP G + +PK+ + EFR D+ VG S F G ++DVT
Sbjct: 61 KGSKSNKYANKPAEGHAKKADTAPKRFIREFRNVNVDE-YEVGQEVSVDTFETGDIIDVT 119
Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
G++ GKGF GA+KRH HG S HR+ GS G D RVFK +KM GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHGQARGPMAHG-SHFHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178
Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
TV+NLEVV VD + +ILVKG VPG KK + + S K
Sbjct: 179 TVQNLEVVQVDTENSVILVKGNVPGPKKG-LVEITTSIKKGNK 220
>gi|322388401|ref|ZP_08062004.1| 50S ribosomal protein L3 [Streptococcus infantis ATCC 700779]
gi|321140714|gb|EFX36216.1| 50S ribosomal protein L3 [Streptococcus infantis ATCC 700779]
Length = 208
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 88/214 (41%), Positives = 128/214 (59%), Gaps = 6/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY A+QVG + +
Sbjct: 1 MTKGILGKKVGMTQIFTEAGELIPVTVIEATPNVVLQVKTVETDGYNAIQVGFDDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + E K+ + L VG+ + F G +VDVTG + GKGF
Sbjct: 61 SNKPAKGHVAKANTAPKRFIRE---FKNVEGLEVGAEITVETFAAGDIVDVTGTSKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFK K +AGRMGG+RVT++NLEVV
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGDRVTIQNLEVV 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V ++ +IL+KG VPGAKK S I ++ + K+
Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKAGK 208
>gi|238928155|ref|ZP_04659915.1| ribosomal protein L3 [Selenomonas flueggei ATCC 43531]
gi|238884115|gb|EEQ47753.1| ribosomal protein L3 [Selenomonas flueggei ATCC 43531]
Length = 220
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 97/220 (44%), Positives = 130/220 (59%), Gaps = 5/220 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
+ ++ RKLGMT ++ EGR +PVTV+ N V+ +T++ +GY AVQ+G G+ K KN
Sbjct: 4 LAKAILGRKLGMTQIFTEEGRVVPVTVVESGNNFVLRSKTVESDGYNAVQIGFGDIKEKN 63
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP++G F V + + E R+ VG F G LVDV G + GKGF
Sbjct: 64 VTKPLKGQFEKAGVKAVRFIREMRLSAP-SEYNVGDTIGVDIFAAGDLVDVVGTSKGKGF 122
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTG--CRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
+G +KRHNF HG S SHR GSTG GRV K KK+ GRMGG RVTV+ L
Sbjct: 123 AGGIKRHNFARGPMGHG-SKSHREPGSTGAMISGPGGRVLKGKKLPGRMGGERVTVQRLT 181
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
VV VD R LIL+KG +PG KK +++++D+ K A K
Sbjct: 182 VVRVDADRNLILIKGAIPGPKKG-FVVIKDTVKPAKAAKE 220
>gi|153872677|ref|ZP_02001498.1| Ribosomal protein L3 [Beggiatoa sp. PS]
gi|152070858|gb|EDN68503.1| Ribosomal protein L3 [Beggiatoa sp. PS]
Length = 213
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 90/214 (42%), Positives = 130/214 (60%), Gaps = 3/214 (1%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
M G+V K GMT +++ G IPVTV+ ++ +T +GY A+QV + K
Sbjct: 1 MALGIVGIKCGMTRLFDTAAGDVIPVTVIKAPPNRITQIKTQIHDGYQAIQVTSPLKVPK 60
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
+++KP++G + +VS +EFR+ D L +G + F GQ VDVTG+T GK
Sbjct: 61 HINKPIKGHLAKASVSTGFGFWEFRLANDTLKELKLGGEIDVTLFVTGQNVDVTGVTKGK 120
Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
GF+G +KRH+F ATHG S+SHR+ GS G Q PGRVFK KKMAG +G R TV+NL
Sbjct: 121 GFAGVVKRHHFRTQDATHGNSLSHRAPGSIGQNQTPGRVFKGKKMAGHLGCQRRTVQNLT 180
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
++ V ++ L+L+KG VPGA + ++VR + K
Sbjct: 181 IMRVIAEKNLLLIKGAVPGAPNGT-VIVRPAIKG 213
>gi|94985967|ref|YP_605331.1| 50S ribosomal protein L3 [Deinococcus geothermalis DSM 11300]
gi|122986549|sp|Q1IX72|RL3_DEIGD RecName: Full=50S ribosomal protein L3
gi|94556248|gb|ABF46162.1| ribosomal protein L3 [Deinococcus geothermalis DSM 11300]
Length = 207
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 89/214 (41%), Positives = 119/214 (55%), Gaps = 7/214 (3%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ K+GMT ++ + R +PVTV+ C VV +T +GY AVQ+G K
Sbjct: 1 MTKGILGTKIGMTQIWKGD-RAVPVTVVLAGPCPVVQRKTKLTDGYEAVQLGFAPKSEKR 59
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V++P G F V+P + L EFR + G + F G+ +D TG + GKG
Sbjct: 60 VNRPELGHFKKAGVAPMRFLREFRDFAPE-----GDTVNVDIFAEGEKIDATGTSKGKGT 114
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G MKR NF G A+HG HR GS G R+ PGRV+K K+MAG MG RVTV+NLEVV
Sbjct: 115 QGVMKRWNFAGGPASHGSKKWHRRPGSIGQRKTPGRVYKGKRMAGHMGMERVTVQNLEVV 174
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V LILVKG +PGA +++R + K
Sbjct: 175 EVRADENLILVKGAIPGA-NGGLVMLRQAAKGGK 207
>gi|269955435|ref|YP_003325224.1| 50S ribosomal protein L3 [Xylanimonas cellulosilytica DSM 15894]
gi|269304116|gb|ACZ29666.1| ribosomal protein L3 [Xylanimonas cellulosilytica DSM 15894]
Length = 217
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 89/211 (42%), Positives = 129/211 (61%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
+ V+ +KLGMT +++ GR +PVTV+ +D V RT + +GY AVQ+ G+ + V+
Sbjct: 9 TAVLGKKLGMTQLWDEAGRLVPVTVVAVDTNVVTQVRTTETDGYSAVQLAVGQIDPRKVT 68
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
+P++G F V+P++ + E R D VG + + F G +VDV+G T GKG +G
Sbjct: 69 QPLKGHFEKAGVTPRRHVAEIR-TADASTYTVGQEITAAAFEAGAVVDVSGTTKGKGTAG 127
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F G+ A+HG +HR GS G P RVFK +MAGRMG R T +NL V +V
Sbjct: 128 VMKRHGFAGVGASHGSHRNHRKPGSIGGASTPSRVFKGLRMAGRMGNARQTTQNLTVHAV 187
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D ++GL+LVKG VPG K ++V+ + K A
Sbjct: 188 DAEKGLLLVKGAVPGP-KGGVVVVKTAAKGA 217
>gi|91205877|ref|YP_538232.1| 50S ribosomal protein L3 [Rickettsia bellii RML369-C]
gi|157826764|ref|YP_001495828.1| 50S ribosomal protein L3 [Rickettsia bellii OSU 85-389]
gi|109893551|sp|Q1RHM1|RL3_RICBR RecName: Full=50S ribosomal protein L3
gi|166234585|sp|A8GVB4|RL3_RICB8 RecName: Full=50S ribosomal protein L3
gi|91069421|gb|ABE05143.1| 50S ribosomal protein L3 [Rickettsia bellii RML369-C]
gi|157802068|gb|ABV78791.1| 50S ribosomal protein L3 [Rickettsia bellii OSU 85-389]
Length = 215
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 109/212 (51%), Positives = 163/212 (76%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+G++A+K+GMT V+N G+R+P+T++ +D+CQVV H+ +K+GY A+ +G + K+
Sbjct: 1 MRTGIIAQKVGMTSVFNNNGKRVPLTLVKVDDCQVVGHKIAEKHGYNALVIGIKDKKISR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KPM+ F++ VSPK KL EFR+ + D+ + + + +FT GQ +DVT TIGKGF
Sbjct: 61 VTKPMKQVFANAKVSPKTKLKEFRISE-DNFIDIAASLEVDHFTAGQFIDVTATTIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG ++VT++NL++
Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCSQVTIQNLKIF 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
++D ++GLI+++G +PG K S+I ++D+ K
Sbjct: 180 AIDKEQGLIMIQGSIPG-HKGSYISIKDAIKK 210
>gi|307708060|ref|ZP_07644528.1| ribosomal protein L3 [Streptococcus mitis NCTC 12261]
gi|307615845|gb|EFN95050.1| ribosomal protein L3 [Streptococcus mitis NCTC 12261]
Length = 208
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 88/214 (41%), Positives = 128/214 (59%), Gaps = 6/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY A+QVG + +
Sbjct: 1 MTKGILGKKVGMTQIFTEAGELIPVTVIEAAPNVVLQVKTVETDGYNAIQVGFDDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + E K+ + L VG+ + F G +VDVTG + GKGF
Sbjct: 61 SNKPAKGHVAKANTAPKRFIRE---FKNVEGLEVGAEITVETFAAGDVVDVTGTSKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFK K +AGRMGG+RVT++NLEVV
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGDRVTIQNLEVV 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V ++ +IL+KG VPGAKK S I ++ + K+
Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKAGK 208
>gi|154483187|ref|ZP_02025635.1| hypothetical protein EUBVEN_00888 [Eubacterium ventriosum ATCC
27560]
gi|149735995|gb|EDM51881.1| hypothetical protein EUBVEN_00888 [Eubacterium ventriosum ATCC
27560]
Length = 198
Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats.
Identities = 86/203 (42%), Positives = 117/203 (57%), Gaps = 5/203 (2%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
MT ++N G +PVTVL C V +T++ +GY AVQVG + + K V+KP++G F
Sbjct: 1 MTQIFNEAGELVPVTVLQAGPCVVTQVKTIENDGYEAVQVGFEDIREKLVNKPVKGMFDK 60
Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
VS K+ + EF+++ + V F G +D T + GKGF GA+KRH
Sbjct: 61 AGVSYKRYVREFKLEGE---YSVKDEIKVDVFEAGDKIDATAIAKGKGFQGAIKRHGQSR 117
Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
HG S HR GS G P RVFK KKM G MGG +VT +NLEVV VD ++ L+LV
Sbjct: 118 GPMAHG-SKYHRHAGSNGSCSTPSRVFKGKKMPGHMGGKKVTTQNLEVVRVDAEKNLLLV 176
Query: 192 KGCVPGAKKNSWILVRDSFKSAV 214
KG VPG KK S + +++S K+
Sbjct: 177 KGAVPGPKK-SLVTIKESVKAGK 198
>gi|182412051|ref|YP_001817117.1| ribosomal protein L3 [Opitutus terrae PB90-1]
gi|177839265|gb|ACB73517.1| ribosomal protein L3 [Opitutus terrae PB90-1]
Length = 216
Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats.
Identities = 85/218 (38%), Positives = 124/218 (56%), Gaps = 2/218 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M S ++ +K+GMT VY+ + +PVTV+ C VV +T + +GY AVQ+G + K KN
Sbjct: 1 MISSLLGKKIGMTQVYDAQNVLVPVTVVEAGPCAVVQVKTTETDGYNAVQIGFEQKKAKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
S + + +++ ++ + L VG V + + F GQLVDV G+T GKGF
Sbjct: 61 ASLAEKNHAAKASLADAPRVLSEVRLEAAPTLKVGDVVNVTAFAEGQLVDVIGVTKGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR G A+HG S+ HR GS G RQ PGR +KN+ M G MG + TV+NL VV
Sbjct: 121 QGVVKRFRVAGGPASHG-SMFHRRIGSIGMRQTPGRTWKNQAMPGHMGQLKRTVQNLRVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+ ++ LILVKG +PGA ++VR + K +
Sbjct: 180 KIIPEKNLILVKGAIPGA-NGDDVIVRSAIKGQKPAQA 216
>gi|168334352|ref|ZP_02692539.1| 50S ribosomal protein L3 [Epulopiscium sp. 'N.t. morphotype B']
Length = 211
Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats.
Identities = 90/214 (42%), Positives = 123/214 (57%), Gaps = 3/214 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++A+K+GMT +++ IPVTVL C VV +T + +GY A+QVG K K
Sbjct: 1 MKKAIMAKKIGMTQIFDENANLIPVTVLEAGPCTVVQKKTKENDGYEAIQVGFINKKEKA 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V KP G F V PKK L EFR D VG F G VDV G+T GKG+
Sbjct: 61 VIKPEAGHFEKAGVEPKKYLKEFRFD-DCSAFEVGGEIKAEVFVKGDKVDVAGVTKGKGY 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+ ++K++ + HG S HR GS G +PGRV K K + RMGG+ VT++NLE+V
Sbjct: 120 TSSIKKYGYSRGPMAHG-SKYHRHAGSMGAATNPGRVMKGKGLPSRMGGDNVTIQNLEIV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VD + LIL+KGCVPG K + + V++S K +
Sbjct: 179 RVDADKNLILIKGCVPGP-KGTVVTVKNSVKHSK 211
>gi|304438362|ref|ZP_07398303.1| 50S ribosomal protein L3 [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304368728|gb|EFM22412.1| 50S ribosomal protein L3 [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 220
Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats.
Identities = 97/220 (44%), Positives = 130/220 (59%), Gaps = 5/220 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
+ ++ RKLGMT ++ EGR +PVTV+ N V+ +T++ +GY AVQ+G G+ K KN
Sbjct: 4 LAKAILGRKLGMTQIFTEEGRVVPVTVVESGNNFVLRSKTVESDGYNAVQIGFGDIKEKN 63
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP++G F V + + E R+ VG F G LVDV G + GKGF
Sbjct: 64 VTKPLKGQFEKAGVKAVRFIREMRLAAP-SEYNVGDTIGVDIFAEGDLVDVVGTSKGKGF 122
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTG--CRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
+G +KRHNF HG S SHR GSTG GRV K KK+ GRMGG RVTV+ L
Sbjct: 123 AGGIKRHNFARGPMGHG-SKSHREPGSTGAMISGPGGRVLKGKKLPGRMGGERVTVQRLT 181
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
VV VD R LIL+KG +PG KK +++++D+ K A K
Sbjct: 182 VVRVDADRNLILIKGAIPGPKKG-FVVIKDTVKPAKAAKE 220
>gi|113953361|ref|YP_729667.1| 50S ribosomal protein L3 [Synechococcus sp. CC9311]
gi|123031873|sp|Q0ID05|RL3_SYNS3 RecName: Full=50S ribosomal protein L3
gi|113880712|gb|ABI45670.1| ribosomal protein L3 [Synechococcus sp. CC9311]
Length = 218
Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats.
Identities = 79/219 (36%), Positives = 128/219 (58%), Gaps = 4/219 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGM+ ++ +G+ +PVT++ C++ ++ + +GY AVQ+G GE + K
Sbjct: 1 MSIGILGKKLGMSQFFDEQGKAVPVTLIEAGPCRITQLKSSETDGYQAVQIGFGEIREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP +G + + L E+RV D + G + F GQ VDV+G T+G+GF
Sbjct: 61 INKPAKGHLAKSGEDLVRHLCEYRVDDLDGIQLGG-AVTVGDFAAGQKVDVSGDTMGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G KRH F THG S +HR GS G PGR++ K+M+GR GG ++T + L ++
Sbjct: 120 AGLQKRHGFSRGPMTHG-SKNHRQPGSIGAGTTPGRIYPGKRMSGRYGGKKITTRGLTIL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK-SAVNCKG 218
+D +R L++VKG VPG S + +R + + A KG
Sbjct: 179 KIDSERNLLVVKGSVPGKP-GSLLNIRPANRVGAKPAKG 216
>gi|58267640|ref|XP_570976.1| ribosomal large subunit assembly and maintenance-related protein
[Cryptococcus neoformans var. neoformans JEC21]
gi|134112043|ref|XP_775557.1| hypothetical protein CNBE2710 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258216|gb|EAL20910.1| hypothetical protein CNBE2710 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227210|gb|AAW43669.1| ribosomal large subunit assembly and maintenance-related protein,
putative [Cryptococcus neoformans var. neoformans JEC21]
Length = 308
Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats.
Identities = 103/222 (46%), Positives = 140/222 (63%), Gaps = 4/222 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD-KNGYMAVQVGAGEAKVK 59
+R+G++ARK GMT +++ +GRR PVTVL +D QVV H + Y +Q+GA + K
Sbjct: 43 LRTGLIARKRGMTALWDADGRRWPVTVLQVDANQVVRHSPPPPTSPYHTLQIGASPRREK 102
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+K G F V PK +L EF+V + D ++PVG+ S +F GQ VDV G+TIGKG
Sbjct: 103 TTTKQQLGHFKKAGVEPKYRLKEFQVSE-DAVVPVGTELSAGHFVPGQFVDVQGVTIGKG 161
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G MKRH F GL+A+HG S+ HRS GS G QDPGRV KKM G MG T +NL +
Sbjct: 162 FQGVMKRHGFRGLKASHGTSVKHRSPGSIGQNQDPGRVIPGKKMPGHMGNVTRTTQNLLI 221
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
VD L+ V+GCVPG+ +S++ V+DS K V K +++
Sbjct: 222 HRVDHVLNLLYVRGCVPGSD-DSFLYVKDS-KKLVKSKAQLA 261
>gi|322812575|pdb|3PYO|D Chain D, Crystal Structure Of A Complex Containing Domain 3 From
The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
File Contains The 50s Subunit Of The First 70s Ribosome.
gi|322812628|pdb|3PYR|D Chain D, Crystal Structure Of A Complex Containing Domain 3 From
The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
File Contains The 50s Subunit Of The Second 70s
Ribosome.
gi|322812681|pdb|3PYT|D Chain D, Crystal Structure Of A Complex Containing Domain 3 Of Crpv
Igr Ires Rna Bound To The 70s Ribosome. This File
Contains The 50s Subunit Of The First 70s Ribosome.
gi|322812734|pdb|3PYV|D Chain D, Crystal Structure Of A Complex Containing Domain 3 Of Crpv
Igr Ires Rna Bound To The 70s Ribosome. This File
Contains The 50s Subunit Of The Second 70s Ribosome
Length = 204
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 90/211 (42%), Positives = 123/211 (58%), Gaps = 7/211 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ K+GMT ++ + R +PVTV+ C VV RT +K+GY AVQ+G K V
Sbjct: 1 MKGILGVKVGMTRIFRDD-RAVPVTVILAGPCPVVQRRTPEKDGYTAVQLGFLPQNPKRV 59
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
++P++G F+ V P + L E R + G + F G+ VDVTG + G+GF+
Sbjct: 60 NRPLKGHFAKAGVEPVRILREIRDFNPE-----GDTVTVEIFKPGERVDVTGTSKGRGFA 114
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR NF G +HG HR GS G R+ PGRV+K KKMAG G RVTV NLEVV
Sbjct: 115 GVMKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGKKMAGHYGAERVTVMNLEVVD 174
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V + L+LVKG VPG ++VR++ K+
Sbjct: 175 VIPEENLLLVKGAVPGP-NGGLVIVRETKKA 204
>gi|90962406|ref|YP_536322.1| 50S ribosomal protein L3 [Lactobacillus salivarius UCC118]
gi|227891544|ref|ZP_04009349.1| 50S ribosomal protein L3 [Lactobacillus salivarius ATCC 11741]
gi|123269876|sp|Q1WS90|RL3_LACS1 RecName: Full=50S ribosomal protein L3
gi|90821600|gb|ABE00239.1| LSU ribosomal protein L3P [Lactobacillus salivarius UCC118]
gi|227866691|gb|EEJ74112.1| 50S ribosomal protein L3 [Lactobacillus salivarius ATCC 11741]
gi|300215031|gb|ADJ79447.1| 50S ribosomal protein L3 [Lactobacillus salivarius CECT 5713]
Length = 207
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 79/210 (37%), Positives = 121/210 (57%), Gaps = 5/210 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT V+ G +PVTV+ +D+ V+ +T++ +GY A+Q+G + +
Sbjct: 3 TKGILGKKVGMTQVFTENGELVPVTVVKVDSNVVLQVKTMENDGYEAIQLGFDDLREVLT 62
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP +G + N +PK+ + E R + + VG F G VDVTG + G GF
Sbjct: 63 NKPAKGHAAKANTTPKRFVREIRDVELGE-YKVGDEVKADIFEAGDFVDVTGTSKGHGFQ 121
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G++KR+ HG S HR GS G RV K K + GRMGGNRVT++NLE+V
Sbjct: 122 GSIKRNGQHRGPMAHG-SRYHRRPGSMGVI--INRVMKGKLLPGRMGGNRVTIQNLEIVK 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
D + G++L+KG VPGA K S + ++ + K
Sbjct: 179 ADTENGVLLIKGNVPGANK-SLVTIKSTVK 207
>gi|16329941|ref|NP_440669.1| 50S ribosomal protein L3 [Synechocystis sp. PCC 6803]
gi|2500229|sp|P73320|RL3_SYNY3 RecName: Full=50S ribosomal protein L3
gi|1652427|dbj|BAA17349.1| 50S ribosomal protein L3 [Synechocystis sp. PCC 6803]
Length = 213
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 86/211 (40%), Positives = 120/211 (56%), Gaps = 4/211 (1%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
M G++ KLGMT +++ G IPVTV+ C V +T D +GY A+QVG K K
Sbjct: 1 MSIGILGTKLGMTQIFDQESGISIPVTVVQAGPCPVTQVKTQDTDGYNAIQVGFLPVKEK 60
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+SKP G N P + L E+R+ D L G + F G LVDV G ++G+G
Sbjct: 61 ALSKPELGHLKKSNTDPMRHLKEYRLT-DAPNLQPGDAVTADIFQAGDLVDVAGQSMGRG 119
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G KRHNF THG S +HR GSTG PGRV+ K+MAG+ G ++VTV+ L V
Sbjct: 120 FAGYQKRHNFRRGNMTHG-SKNHRLPGSTGAGTTPGRVYPGKRMAGQYGASQVTVRRLTV 178
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
V VD +R L+++KG +PG + + + +
Sbjct: 179 VRVDAERNLLIIKGALPGKP-GTLLNITPAK 208
>gi|239636233|ref|ZP_04677237.1| 50S ribosomal protein L3 [Staphylococcus warneri L37603]
gi|239598249|gb|EEQ80742.1| 50S ribosomal protein L3 [Staphylococcus warneri L37603]
gi|330685188|gb|EGG96852.1| 50S ribosomal protein L3 [Staphylococcus epidermidis VCU121]
Length = 223
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 94/223 (42%), Positives = 123/223 (55%), Gaps = 11/223 (4%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK- 59
M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+QVG + K
Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEAGQNVVLQKKTEEVDGYNAIQVGFEDKKAYK 60
Query: 60 -------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
+KP G + +PK+ + EFR D+ VG S F G ++DVT
Sbjct: 61 KGSKTNKYANKPAEGHAKKADTAPKRFIREFRNVNVDE-YEVGQEVSVDTFETGDIIDVT 119
Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
G++ GKGF GA+KRH HG S HR+ GS G D RVFK +KM GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHGQARGPMAHG-SHFHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178
Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
TV+NLEVV VD + +ILVKG VPG KK + + S KS
Sbjct: 179 TVQNLEVVQVDTENSVILVKGNVPGPKKG-LVEISTSIKSIKK 220
>gi|321259123|ref|XP_003194282.1| ribosomal large subunit assembly and maintenance-related protein
[Cryptococcus gattii WM276]
gi|317460753|gb|ADV22495.1| Ribosomal large subunit assembly and maintenance-related protein,
putative [Cryptococcus gattii WM276]
Length = 308
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 103/222 (46%), Positives = 139/222 (62%), Gaps = 4/222 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD-KNGYMAVQVGAGEAKVK 59
+R+G++ARK GMT +++ +GRR PVTVL +D QVV H + Y +Q+GA + K
Sbjct: 43 LRTGLIARKRGMTALWDADGRRWPVTVLQVDANQVVRHSPPPPTSPYHTLQIGASPRREK 102
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+K G F V PK +L EF+V D ++PVG+ S +F GQ VDV G+TIGKG
Sbjct: 103 TTTKQQLGHFRKAGVEPKYRLKEFQVS-GDAVVPVGTELSAGHFVPGQFVDVQGVTIGKG 161
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G MKRH F GL+A+HG S+ HRS GS G QDPGRV KKM G MG T +NL +
Sbjct: 162 FQGVMKRHGFRGLKASHGTSVKHRSGGSIGQNQDPGRVIPGKKMPGHMGNATRTTQNLLI 221
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
VD L+ V+GCVPG+ +S++ V+DS K V K +++
Sbjct: 222 HRVDHILNLLYVRGCVPGSD-DSFLYVKDS-KKLVKSKAQLA 261
>gi|15900145|ref|NP_344749.1| 50S ribosomal protein L3 [Streptococcus pneumoniae TIGR4]
gi|15902232|ref|NP_357782.1| 50S ribosomal protein L3 [Streptococcus pneumoniae R6]
gi|111658801|ref|ZP_01409432.1| hypothetical protein SpneT_02000098 [Streptococcus pneumoniae
TIGR4]
gi|116516725|ref|YP_815712.1| 50S ribosomal protein L3 [Streptococcus pneumoniae D39]
gi|148983607|ref|ZP_01816926.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP3-BS71]
gi|148987945|ref|ZP_01819408.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP6-BS73]
gi|148992785|ref|ZP_01822428.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP9-BS68]
gi|148996630|ref|ZP_01824348.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP11-BS70]
gi|149001686|ref|ZP_01826659.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP14-BS69]
gi|149005958|ref|ZP_01829687.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP18-BS74]
gi|149011077|ref|ZP_01832382.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP19-BS75]
gi|149017897|ref|ZP_01834356.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP23-BS72]
gi|168483845|ref|ZP_02708797.1| ribosomal protein L3 [Streptococcus pneumoniae CDC1873-00]
gi|168486024|ref|ZP_02710532.1| ribosomal protein L3 [Streptococcus pneumoniae CDC1087-00]
gi|168489686|ref|ZP_02713885.1| ribosomal protein L3 [Streptococcus pneumoniae SP195]
gi|168492162|ref|ZP_02716305.1| ribosomal protein L3 [Streptococcus pneumoniae CDC0288-04]
gi|168493902|ref|ZP_02718045.1| ribosomal protein L3 [Streptococcus pneumoniae CDC3059-06]
gi|168576364|ref|ZP_02722247.1| ribosomal protein L3 [Streptococcus pneumoniae MLV-016]
gi|169833378|ref|YP_001693741.1| 50S ribosomal protein L3 [Streptococcus pneumoniae Hungary19A-6]
gi|182683188|ref|YP_001834935.1| 50S ribosomal protein L3 [Streptococcus pneumoniae CGSP14]
gi|194397396|ref|YP_002036910.1| 50S ribosomal protein L3 [Streptococcus pneumoniae G54]
gi|221231113|ref|YP_002510265.1| 50S ribosomal protein L3 [Streptococcus pneumoniae ATCC 700669]
gi|225853815|ref|YP_002735327.1| 50S ribosomal protein L3 [Streptococcus pneumoniae JJA]
gi|225855974|ref|YP_002737485.1| 50S ribosomal protein L3 [Streptococcus pneumoniae P1031]
gi|225858063|ref|YP_002739573.1| 50S ribosomal protein L3 [Streptococcus pneumoniae 70585]
gi|225860251|ref|YP_002741760.1| 50S ribosomal protein L3 [Streptococcus pneumoniae Taiwan19F-14]
gi|237649723|ref|ZP_04523975.1| 50S ribosomal protein L3 [Streptococcus pneumoniae CCRI 1974]
gi|237821421|ref|ZP_04597266.1| 50S ribosomal protein L3 [Streptococcus pneumoniae CCRI 1974M2]
gi|270292000|ref|ZP_06198215.1| ribosomal protein L3 [Streptococcus sp. M143]
gi|289168732|ref|YP_003447001.1| 50S ribosomal protein L3 [Streptococcus mitis B6]
gi|293364347|ref|ZP_06611073.1| 50S ribosomal protein L3 [Streptococcus oralis ATCC 35037]
gi|298230366|ref|ZP_06964047.1| 50S ribosomal protein L3 [Streptococcus pneumoniae str. Canada
MDR_19F]
gi|298255987|ref|ZP_06979573.1| 50S ribosomal protein L3 [Streptococcus pneumoniae str. Canada
MDR_19A]
gi|298502023|ref|YP_003723963.1| 50S ribosomal protein L3 [Streptococcus pneumoniae TCH8431/19A]
gi|303255095|ref|ZP_07341171.1| 50S ribosomal protein L3 [Streptococcus pneumoniae BS455]
gi|303259261|ref|ZP_07345239.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP-BS293]
gi|303261016|ref|ZP_07346965.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP14-BS292]
gi|303263344|ref|ZP_07349267.1| 50S ribosomal protein L3 [Streptococcus pneumoniae BS397]
gi|303265509|ref|ZP_07351409.1| 50S ribosomal protein L3 [Streptococcus pneumoniae BS457]
gi|303267933|ref|ZP_07353735.1| 50S ribosomal protein L3 [Streptococcus pneumoniae BS458]
gi|306825986|ref|ZP_07459322.1| 50S ribosomal protein L3 [Streptococcus sp. oral taxon 071 str.
73H25AP]
gi|306828783|ref|ZP_07461975.1| 50S ribosomal protein L3 [Streptococcus mitis ATCC 6249]
gi|307066886|ref|YP_003875852.1| hypothetical protein SPAP_0257 [Streptococcus pneumoniae AP200]
gi|307126429|ref|YP_003878460.1| 50S ribosomal protein L3 [Streptococcus pneumoniae 670-6B]
gi|307702686|ref|ZP_07639638.1| 50S ribosomal protein L3 (BL3) [Streptococcus oralis ATCC 35037]
gi|307704065|ref|ZP_07640994.1| 50S ribosomal protein L3 (BL3) [Streptococcus mitis SK597]
gi|307709910|ref|ZP_07646357.1| 50S ribosomal protein L3 (BL3) [Streptococcus mitis SK564]
gi|307711054|ref|ZP_07647476.1| 50S ribosomal protein L3 (BL3) [Streptococcus mitis SK321]
gi|315612332|ref|ZP_07887245.1| 50S ribosomal protein L3 [Streptococcus sanguinis ATCC 49296]
gi|322375039|ref|ZP_08049553.1| 50S ribosomal protein L3 [Streptococcus sp. C300]
gi|322377230|ref|ZP_08051722.1| 50S ribosomal protein L3 [Streptococcus sp. M334]
gi|322391199|ref|ZP_08064671.1| 50S ribosomal protein L3 [Streptococcus peroris ATCC 700780]
gi|331267136|ref|YP_004326766.1| 50S ribosomal protein L3 [Streptococcus oralis Uo5]
gi|42559631|sp|Q8CWV8|RL3_STRR6 RecName: Full=50S ribosomal protein L3
gi|42559682|sp|Q97SV5|RL3_STRPN RecName: Full=50S ribosomal protein L3
gi|122279402|sp|Q04MN6|RL3_STRP2 RecName: Full=50S ribosomal protein L3
gi|226730574|sp|B5E6F5|RL3_STRP4 RecName: Full=50S ribosomal protein L3
gi|226730575|sp|B1I8J8|RL3_STRPI RecName: Full=50S ribosomal protein L3
gi|226730576|sp|B2IS40|RL3_STRPS RecName: Full=50S ribosomal protein L3
gi|254803693|sp|C1CAL2|RL3_STRP7 RecName: Full=50S ribosomal protein L3
gi|254803694|sp|B8ZKF7|RL3_STRPJ RecName: Full=50S ribosomal protein L3
gi|254803696|sp|C1CC06|RL3_STRZJ RecName: Full=50S ribosomal protein L3
gi|254803697|sp|C1CI97|RL3_STRZP RecName: Full=50S ribosomal protein L3
gi|254803698|sp|C1CP88|RL3_STRZT RecName: Full=50S ribosomal protein L3
gi|14971677|gb|AAK74389.1| ribosomal protein L3 [Streptococcus pneumoniae TIGR4]
gi|15457732|gb|AAK98992.1| 50S Ribosomal protein L3 [Streptococcus pneumoniae R6]
gi|116077301|gb|ABJ55021.1| ribosomal protein L3 [Streptococcus pneumoniae D39]
gi|147757205|gb|EDK64244.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP11-BS70]
gi|147760144|gb|EDK67133.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP14-BS69]
gi|147762314|gb|EDK69275.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP18-BS74]
gi|147764713|gb|EDK71643.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP19-BS75]
gi|147923754|gb|EDK74866.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP3-BS71]
gi|147926409|gb|EDK77482.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP6-BS73]
gi|147928511|gb|EDK79526.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP9-BS68]
gi|147931461|gb|EDK82439.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP23-BS72]
gi|168995880|gb|ACA36492.1| ribosomal protein L3 [Streptococcus pneumoniae Hungary19A-6]
gi|172042867|gb|EDT50913.1| ribosomal protein L3 [Streptococcus pneumoniae CDC1873-00]
gi|182628522|gb|ACB89470.1| 50S ribosomal protein L3 [Streptococcus pneumoniae CGSP14]
gi|183570883|gb|EDT91411.1| ribosomal protein L3 [Streptococcus pneumoniae CDC1087-00]
gi|183571866|gb|EDT92394.1| ribosomal protein L3 [Streptococcus pneumoniae SP195]
gi|183573583|gb|EDT94111.1| ribosomal protein L3 [Streptococcus pneumoniae CDC0288-04]
gi|183576220|gb|EDT96748.1| ribosomal protein L3 [Streptococcus pneumoniae CDC3059-06]
gi|183577906|gb|EDT98434.1| ribosomal protein L3 [Streptococcus pneumoniae MLV-016]
gi|194357063|gb|ACF55511.1| 50S ribosomal protein L3 [Streptococcus pneumoniae G54]
gi|220673573|emb|CAR68059.1| 50S ribosomal protein L3 [Streptococcus pneumoniae ATCC 700669]
gi|225720422|gb|ACO16276.1| ribosomal protein L3 [Streptococcus pneumoniae 70585]
gi|225722972|gb|ACO18825.1| ribosomal protein L3 [Streptococcus pneumoniae JJA]
gi|225725081|gb|ACO20933.1| ribosomal protein L3 [Streptococcus pneumoniae P1031]
gi|225726716|gb|ACO22567.1| ribosomal protein L3 [Streptococcus pneumoniae Taiwan19F-14]
gi|270279528|gb|EFA25370.1| ribosomal protein L3 [Streptococcus sp. M143]
gi|288908299|emb|CBJ23141.1| 50S ribosomal protein L3 [Streptococcus mitis B6]
gi|291317193|gb|EFE57620.1| 50S ribosomal protein L3 [Streptococcus oralis ATCC 35037]
gi|298237618|gb|ADI68749.1| 50S ribosomal protein L3 [Streptococcus pneumoniae TCH8431/19A]
gi|301793482|emb|CBW35855.1| 50S ribosomal protein L3 [Streptococcus pneumoniae INV104]
gi|301799358|emb|CBW31893.1| 50S ribosomal protein L3 [Streptococcus pneumoniae OXC141]
gi|301801153|emb|CBW33826.1| 50S ribosomal protein L3 [Streptococcus pneumoniae INV200]
gi|302597925|gb|EFL64995.1| 50S ribosomal protein L3 [Streptococcus pneumoniae BS455]
gi|302637853|gb|EFL68339.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP14-BS292]
gi|302639679|gb|EFL70136.1| 50S ribosomal protein L3 [Streptococcus pneumoniae SP-BS293]
gi|302642629|gb|EFL72974.1| 50S ribosomal protein L3 [Streptococcus pneumoniae BS458]
gi|302644949|gb|EFL75196.1| 50S ribosomal protein L3 [Streptococcus pneumoniae BS457]
gi|302647117|gb|EFL77341.1| 50S ribosomal protein L3 [Streptococcus pneumoniae BS397]
gi|304428961|gb|EFM32049.1| 50S ribosomal protein L3 [Streptococcus mitis ATCC 6249]
gi|304431702|gb|EFM34682.1| 50S ribosomal protein L3 [Streptococcus sp. oral taxon 071 str.
73H25AP]
gi|306408423|gb|ADM83850.1| hypothetical protein SPAP_0257 [Streptococcus pneumoniae AP200]
gi|306483491|gb|ADM90360.1| ribosomal protein L3 [Streptococcus pneumoniae 670-6B]
gi|307617016|gb|EFN96194.1| 50S ribosomal protein L3 (BL3) [Streptococcus mitis SK321]
gi|307619281|gb|EFN98410.1| 50S ribosomal protein L3 (BL3) [Streptococcus mitis SK564]
gi|307622355|gb|EFO01363.1| 50S ribosomal protein L3 (BL3) [Streptococcus mitis SK597]
gi|307623802|gb|EFO02787.1| 50S ribosomal protein L3 (BL3) [Streptococcus oralis ATCC 35037]
gi|315315313|gb|EFU63352.1| 50S ribosomal protein L3 [Streptococcus sanguinis ATCC 49296]
gi|321145952|gb|EFX41341.1| 50S ribosomal protein L3 [Streptococcus peroris ATCC 700780]
gi|321280539|gb|EFX57578.1| 50S ribosomal protein L3 [Streptococcus sp. C300]
gi|321281943|gb|EFX58951.1| 50S ribosomal protein L3 [Streptococcus sp. M334]
gi|326683808|emb|CBZ01426.1| 50S ribosomal protein L3 [Streptococcus oralis Uo5]
gi|327390628|gb|EGE88968.1| 50S ribosomal protein L3 [Streptococcus pneumoniae GA04375]
gi|332075874|gb|EGI86341.1| 50S ribosomal protein L3 [Streptococcus pneumoniae GA17570]
gi|332076655|gb|EGI87117.1| 50S ribosomal protein L3 [Streptococcus pneumoniae GA17545]
gi|332077510|gb|EGI87971.1| 50S ribosomal protein L3 [Streptococcus pneumoniae GA41301]
Length = 208
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 89/214 (41%), Positives = 129/214 (60%), Gaps = 6/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY A+QVG + +
Sbjct: 1 MTKGILGKKVGMTQIFTEAGELIPVTVIEATPNVVLQVKTVETDGYNAIQVGFDDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EF K+ + L VG+ + F G +VDVTG + GKGF
Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF---KNVEGLEVGAEITVETFAAGDVVDVTGTSKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFK K +AGRMGG+RVT++NLEVV
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGDRVTIQNLEVV 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V ++ +IL+KG VPGAKK S I ++ + K+
Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKAGK 208
>gi|167518906|ref|XP_001743793.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777755|gb|EDQ91371.1| predicted protein [Monosiga brevicollis MX1]
Length = 309
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 98/214 (45%), Positives = 143/214 (66%), Gaps = 2/214 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+ ++A+KLGMT ++ G IP+TVL +++CQVV HRT++++GY A+ +GA K +
Sbjct: 66 RAPLIAKKLGMTQTWDRWGTLIPMTVLQVEDCQVVGHRTIERDGYEALILGAETIKDSKL 125
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+RG F+ + K+ + E R+ + +LP+G S +F GQLVDV G TIGKGF+
Sbjct: 126 DGRIRGQFAKHGLPSKRHMEEARISA-EAMLPIGYELSCEHFEPGQLVDVRGTTIGKGFA 184
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRHNF G+ ATHGV+ +HR G G QDPGRV+K K+ AGRMGG +NL V+
Sbjct: 185 GVMKRHNFKGMPATHGVTKTHRRMGGFGGGQDPGRVWKGKRNAGRMGGVLRWQRNLAVIR 244
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
+D + LI+V G +PGA+ NS +LVRD+ + ++
Sbjct: 245 IDTRYNLIMVAGSIPGAE-NSRVLVRDAIMNPLH 277
>gi|34581369|ref|ZP_00142849.1| 50S ribosomal protein L3 [Rickettsia sibirica 246]
gi|28262754|gb|EAA26258.1| 50S ribosomal protein L3 [Rickettsia sibirica 246]
Length = 215
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 113/212 (53%), Positives = 163/212 (76%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL+K+GY A+ +G + K+
Sbjct: 1 MRTGIIAQKIGMTSVFNDKGERISLTLVKVDDCQVVGHKTLEKHGYNALVIGVKDKKISR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KPMR F++ +SPK KL EFR+ ++ + + + +FT GQ VD+T TIGKGF
Sbjct: 61 VTKPMRQVFANAKISPKTKLKEFRISA-ENFIDIAASLEVDHFTAGQFVDITATTIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++
Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIF 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+VD +R LI+++G +PG KNS++ V+D+ K
Sbjct: 180 AVDKERKLIMIQGSIPG-HKNSYLSVKDAIKK 210
>gi|229815775|ref|ZP_04446100.1| hypothetical protein COLINT_02824 [Collinsella intestinalis DSM
13280]
gi|229808691|gb|EEP44468.1| hypothetical protein COLINT_02824 [Collinsella intestinalis DSM
13280]
Length = 206
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 90/209 (43%), Positives = 121/209 (57%), Gaps = 3/209 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M + ++ RK+GMT V++ + +PVTV+ C V +T +GY AVQ+G G+ K K+
Sbjct: 1 MINMILGRKIGMTQVWDEDDNVVPVTVIQAGPCTVSQVKTEATDGYNAVQIGFGDIKSKH 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KPM G F+ V P + L E RV+ ++ VG V + + F VDV G + GKGF
Sbjct: 61 VNKPMAGHFAKAGVEPVRYLREVRVENGEE-HKVGDVVTVADFENVAKVDVIGTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR N THG I R GS G P RV K KMAG MG RVTVKNL VV
Sbjct: 120 QGRIKRWNQRRGPMTHGSHI-QRHPGSIGQCAYPARVLKGVKMAGHMGNARVTVKNLSVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
+D ++ L+LVKG VPG KN + +R +
Sbjct: 179 RIDAEQNLMLVKGAVPGG-KNGLVAIRMA 206
>gi|322410858|gb|EFY01766.1| 50S ribosomal protein L3 [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 208
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 92/214 (42%), Positives = 131/214 (61%), Gaps = 6/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + +
Sbjct: 1 MTKGILGKKVGMTQIFTETGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EF+ + L VGS + F G +VDVTG + GKGF
Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFKNIEG---LEVGSEITVDTFVAGDVVDVTGTSKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFKNK++AGRMGGNRVT++NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTIQNLEIV 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V ++ +IL+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVILIKGNVPGAKK-SLITIKSAVKAAK 208
>gi|303287272|ref|XP_003062925.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455561|gb|EEH52864.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 221
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 104/215 (48%), Positives = 138/215 (64%), Gaps = 2/215 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G +A K+GMT +N G R+P+TVL +D C+VV +T +K GY A+Q+GAG K K +
Sbjct: 5 RVGALAVKVGMTQEWNEHGARVPLTVLWIDECEVVQAKTPEKEGYAALQMGAGSKKRKQI 64
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+ G F++ V K++L EFRV D +LPVG+V S+F GQ VD+ G TIGKGF
Sbjct: 65 TGAEYGHFAARGVQIKRELSEFRVTP-DAILPVGTVVDASHFLAGQYVDIQGKTIGKGFQ 123
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR F GL A+HG + HR+HGS G QDPGRV+K KKMAG+MG TV+N V
Sbjct: 124 GPMKRWGFAGLPASHGTTKKHRAHGSIGNSQDPGRVWKGKKMAGQMGNRTRTVQNCFVYR 183
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
VD +R LI V G VPG + N ++ V+D+ +
Sbjct: 184 VDPERNLIYVVGQVPGKRGN-FVRVKDALRKGDPT 217
>gi|146317731|ref|YP_001197443.1| 50S ribosomal protein L3 [Streptococcus suis 05ZYH33]
gi|253750987|ref|YP_003024128.1| 50S ribosomal protein L3 [Streptococcus suis SC84]
gi|253752887|ref|YP_003026027.1| 50S ribosomal protein L3 [Streptococcus suis P1/7]
gi|253754712|ref|YP_003027852.1| 50S ribosomal protein L3 [Streptococcus suis BM407]
gi|330831920|ref|YP_004400745.1| 50S ribosomal protein L3 [Streptococcus suis ST3]
gi|166234601|sp|A4VSF4|RL3_STRSY RecName: Full=50S ribosomal protein L3
gi|145688537|gb|ABP89043.1| Ribosomal protein L3 [Streptococcus suis 05ZYH33]
gi|251815276|emb|CAZ50842.1| 50S ribosomal protein L3 [Streptococcus suis SC84]
gi|251817176|emb|CAZ54898.1| 50S ribosomal protein L3 [Streptococcus suis BM407]
gi|251819132|emb|CAR44223.1| 50S ribosomal protein L3 [Streptococcus suis P1/7]
gi|292557531|gb|ADE30532.1| ribosomal protein L3 [Streptococcus suis GZ1]
gi|319757241|gb|ADV69183.1| 50S ribosomal protein L3 [Streptococcus suis JS14]
gi|329306143|gb|AEB80559.1| 50S ribosomal protein L3 [Streptococcus suis ST3]
Length = 208
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 90/214 (42%), Positives = 127/214 (59%), Gaps = 6/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + +
Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYAAVQVGFDDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EF+ + L VG + F G +VDVTG + GKGF
Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFKNIEG---LEVGQEITVETFAAGDVVDVTGTSKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFK K +AGRMGGNRVT++NLEVV
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGNRVTIQNLEVV 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V ++ +IL+KG VPGAKK S I ++ + K+
Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKAGK 208
>gi|15892929|ref|NP_360643.1| 50S ribosomal protein L3 [Rickettsia conorii str. Malish 7]
gi|42559674|sp|Q92GW6|RL3_RICCN RecName: Full=50S ribosomal protein L3
gi|15620121|gb|AAL03544.1| 50S ribosomal protein L3 [Rickettsia conorii str. Malish 7]
Length = 215
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 113/212 (53%), Positives = 164/212 (77%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL+K+GY A+ +G + K+
Sbjct: 1 MRTGIIAQKIGMTSVFNDKGERISLTLVKVDDCQVVGHKTLEKHGYNALVIGVKDKKISR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KPMR F++ +SPK KL EFR+ + ++ + + + +FT GQ VD+T TIGKGF
Sbjct: 61 VTKPMRQVFANAKISPKTKLKEFRISE-ENFIDIAASLEVDHFTAGQFVDITATTIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++
Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNKVTIQNLKIF 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+VD +R LI+++G +PG KNS++ V+D+ K
Sbjct: 180 AVDKERKLIMIQGSIPG-HKNSYLSVKDAIKK 210
>gi|317050528|ref|YP_004111644.1| 50S ribosomal protein L3 [Desulfurispirillum indicum S5]
gi|316945612|gb|ADU65088.1| 50S ribosomal protein L3 [Desulfurispirillum indicum S5]
Length = 209
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 101/209 (48%), Positives = 131/209 (62%), Gaps = 4/209 (1%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEA-KVKNVSK 63
++ +K+GMT ++ +G IPVTV+ C VV +T+D +GY AVQVG EA K K VSK
Sbjct: 4 LIGKKIGMTQIFCEDGTVIPVTVVEAGPCTVVQVKTVDSDGYAAVQVGFEEALKEKRVSK 63
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P++G F+ V+P++ L EFRV +D VG + F G +DVTG + GKGF G
Sbjct: 64 PLKGHFAKSGVAPQRHLKEFRV-EDPAGFSVGQQLTAEVFAAGDKIDVTGTSKGKGFQGV 122
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
+KRH FGG RATHG S HR+ GS G P R FKNKKM GRMGG TV+ LEVV V
Sbjct: 123 IKRHGFGGGRATHG-STFHRAPGSIGMCATPSRTFKNKKMPGRMGGKTTTVQCLEVVKVM 181
Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+ L+LVKG +PG+ K I + S K+
Sbjct: 182 ADQNLLLVKGAIPGS-KGGIIEISQSQKA 209
>gi|88807884|ref|ZP_01123395.1| 50S ribosomal protein L3 [Synechococcus sp. WH 7805]
gi|88787923|gb|EAR19079.1| 50S ribosomal protein L3 [Synechococcus sp. WH 7805]
Length = 218
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 85/219 (38%), Positives = 130/219 (59%), Gaps = 4/219 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGM+ +++ +G+ +PVT++ C++ +T + +GY AVQ+G GE + K
Sbjct: 1 MSIGILGKKLGMSQLFDEQGKAVPVTLIEAGPCRITQLKTTETDGYSAVQIGFGETRDKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP +G + + L E+RV D D L +G + F GQ VDV+G T+G+GF
Sbjct: 61 VNKPAKGHLAKSGEGVLRHLSEYRVD-DVDGLELGGAVTVGDFEAGQKVDVSGDTMGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G KRH F THG S +HR GSTG PGR++ K+MAGR GG + T + L ++
Sbjct: 120 AGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKTTTRGLTIL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK-SAVNCKG 218
VD R L++VKG VPG + + +R + + A KG
Sbjct: 179 RVDSDRNLLVVKGSVPGKP-GALLNIRPANRVGAKPAKG 216
>gi|302669961|ref|YP_003829921.1| ribosomal protein L3 RplC [Butyrivibrio proteoclasticus B316]
gi|302394434|gb|ADL33339.1| ribosomal protein L3 RplC [Butyrivibrio proteoclasticus B316]
Length = 227
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 86/227 (37%), Positives = 123/227 (54%), Gaps = 19/227 (8%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++A K+GMT ++ +G +PVTVL C V +T++ +GY AVQVG + K K
Sbjct: 1 MKKAILATKVGMTQIFKEDGSLVPVTVLQAGPCVVTQIKTVENDGYSAVQVGFVDKKEKV 60
Query: 61 VSKP----------------MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
V+K +G F VS K+ + EF+++ D +G+ F
Sbjct: 61 VNKDKNGNKTIYHRHGATKAEQGHFKKAGVSCKRYVREFKLENAAD-YALGAEIKADVFA 119
Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
G +D T ++ GKGF GA+K++ HG S HR GS G DP RVFK K M
Sbjct: 120 EGDKIDATAISKGKGFQGAIKKNGQHRGPMAHG-SKFHRHQGSNGSSSDPSRVFKGKGMP 178
Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
G MG +VTV+NLEVV VD + LILVKG +PG KK + ++++ K
Sbjct: 179 GHMGSVKVTVQNLEVVRVDADKNLILVKGAIPGPKKG-LVTIKETVK 224
>gi|296126865|ref|YP_003634117.1| 50S ribosomal protein L3 [Brachyspira murdochii DSM 12563]
gi|296018681|gb|ADG71918.1| 50S ribosomal protein L3 [Brachyspira murdochii DSM 12563]
Length = 217
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 83/205 (40%), Positives = 116/205 (56%), Gaps = 3/205 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +KLGMT V++ G I VTV+ C V+ R +K+GY A+Q+G G K K++
Sbjct: 1 MVGIIGKKLGMTTVFDETGNAIAVTVVEAGPCTVMQIRDNEKDGYSAIQLGYGAVKEKHL 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
KP G F N+ PKK L EFR+ VG F G +DV+ ++ G+GF+
Sbjct: 61 KKPQIGQFKKANLEPKKYLKEFRMDNTSS-YTVGQELKADVFQAGDFIDVSSLSKGRGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRHN+ G +HG S R GS GC P RV+K K M G MG T++NL+VV
Sbjct: 120 GVMKRHNYDGGPMSHG-SNFRRRAGSIGCNSYPARVWKGKGMPGHMGNALTTIQNLKVVE 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206
+ LI++KG +PGA NS + +
Sbjct: 179 IRPDDNLIMIKGAIPGAV-NSIVKL 202
>gi|218131327|ref|ZP_03460131.1| hypothetical protein BACEGG_02938 [Bacteroides eggerthii DSM 20697]
gi|217986259|gb|EEC52596.1| hypothetical protein BACEGG_02938 [Bacteroides eggerthii DSM 20697]
Length = 205
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 83/204 (40%), Positives = 124/204 (60%), Gaps = 4/204 (1%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT V++ EG+ +P TV+ C V +T++K+GY AVQ+G + K K+ +K
Sbjct: 3 GLLGKKIGMTSVFSAEGKNVPCTVIEAGPCVVTQVKTVEKDGYQAVQLGFQDKKEKHTTK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P+ G F V+PKK L EF ++ + L +G + F VDV G + GKGF G
Sbjct: 63 PLMGHFKKAGVTPKKHLAEF--KEFETELNLGDTVTVELFEGADFVDVVGTSKGKGFQGV 120
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G + THG R GS G P +VFK +M G++GG+RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180
Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
+ L+L+KG VPG K S +++
Sbjct: 181 IAEHNLLLIKGSVPGC-KGSIVII 203
>gi|225850735|ref|YP_002730969.1| 50S ribosomal protein L3 [Persephonella marina EX-H1]
gi|254803685|sp|C0QQM3|RL3_PERMH RecName: Full=50S ribosomal protein L3
gi|225645055|gb|ACO03241.1| 50S ribosomal protein L3 [Persephonella marina EX-H1]
Length = 227
Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats.
Identities = 92/210 (43%), Positives = 129/210 (61%), Gaps = 3/210 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT V+ +G+ IPVTV+ ++ VV RT DK+GY AV +G GE K K
Sbjct: 1 MPKGIIGKKIGMTRVF-KDGKAIPVTVIQVEPNYVVNIRTEDKDGYSAVVLGTGEKKEKR 59
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
KPM F + P + L EF +++ + P V F G LVDVTG + G+GF
Sbjct: 60 TPKPMLAIFKKAGLKPLRHLAEFPLKEGEQPEPGQEVKVEDVFEKGDLVDVTGTSKGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+ AMKR +F G + +HG S HR+ GS G DPGRV+K K+MAG G +TV+ LEVV
Sbjct: 120 ASAMKRWDFSGFKKSHG-SRYHRAVGSIGACSDPGRVWKTKRMAGHYGNETITVQGLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
+ ++ +ILVKG VPGA K S + +++S
Sbjct: 179 DIIPEKNIILVKGSVPGAPK-SVVKLKESV 207
>gi|220928207|ref|YP_002505116.1| 50S ribosomal protein L3 [Clostridium cellulolyticum H10]
gi|254803665|sp|B8I7X9|RL3_CLOCE RecName: Full=50S ribosomal protein L3
gi|219998535|gb|ACL75136.1| ribosomal protein L3 [Clostridium cellulolyticum H10]
Length = 212
Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats.
Identities = 84/214 (39%), Positives = 126/214 (58%), Gaps = 2/214 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++ +K+GMT +++ G IPVTV+ VV +T++ +GY A++VG + K
Sbjct: 1 MKKAMLGKKIGMTQIFDENGLVIPVTVVEAGPLTVVQKKTVETDGYDAIKVGYVKVAEKK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+SKP G FS ++P K L EFR++ + + + F G +DV+G++ GKGF
Sbjct: 61 LSKPNLGQFSKTKLAPMKHLKEFRLEDISGFEVGQEIKAENMFQSGDKIDVSGVSKGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G KR+ THG S+ HR GS G +PGRVFK KK+ G MG +TV+NLEVV
Sbjct: 121 QGVTKRYGQRTGPNTHG-SMYHRRIGSMGSGTNPGRVFKGKKLPGHMGRETITVQNLEVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VD R LIL+KG +PG K ++++++ KS
Sbjct: 180 RVDSDRNLILIKGAIPGP-KGGLLVIKNTVKSGK 212
>gi|157964806|ref|YP_001499630.1| 50S ribosomal protein L3 [Rickettsia massiliae MTU5]
gi|166990939|sp|A8F2E7|RL3_RICM5 RecName: Full=50S ribosomal protein L3
gi|157844582|gb|ABV85083.1| 50S ribosomal protein L3 [Rickettsia massiliae MTU5]
Length = 215
Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats.
Identities = 111/212 (52%), Positives = 163/212 (76%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL+K+GY A+ +G + K+
Sbjct: 1 MRTGIIAQKVGMTSVFNDKGERISLTLVKVDDCQVVGHKTLEKHGYNALVIGVKDKKISR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KPM+ F++ +SPK KL EFR+ + + + + + +FT GQ VD+T TIGKGF
Sbjct: 61 VTKPMKQVFANAKISPKTKLKEFRISE-EHFIDIATSLEVDHFTAGQFVDITATTIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VF+ KKMAG MG N+VT++NL++
Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFRGKKMAGHMGCNQVTIQNLKIF 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+VD +R LI+++G +PG KNS++ V+D+ K
Sbjct: 180 AVDKERKLIMIQGSIPG-HKNSYLSVKDAIKK 210
>gi|239948319|ref|ZP_04700072.1| 50S ribosomal protein L3 [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239922595|gb|EER22619.1| 50S ribosomal protein L3 [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 215
Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats.
Identities = 113/212 (53%), Positives = 165/212 (77%), Gaps = 2/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL+K+GY A+ +G + K+
Sbjct: 1 MRTGIIAQKIGMTSVFNDKGERISLTLVKVDDCQVVGHKTLEKHGYNALVIGVKDKKISR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V KPM+ F++ +SPK KL EFR+ + ++ + + + +FT GQ VD+T +TIGKGF
Sbjct: 61 VIKPMKQVFANAKISPKTKLKEFRISE-ENFIDIAASLEVDHFTAGQFVDITAITIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++
Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIF 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+VD +R LI+++G +PG KNS++LV+D+ K
Sbjct: 180 AVDKERKLIMIQGSIPG-HKNSYLLVKDAIKK 210
>gi|329962267|ref|ZP_08300273.1| 50S ribosomal protein L3 [Bacteroides fluxus YIT 12057]
gi|328530375|gb|EGF57252.1| 50S ribosomal protein L3 [Bacteroides fluxus YIT 12057]
Length = 205
Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 83/204 (40%), Positives = 124/204 (60%), Gaps = 4/204 (1%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT V++ EG+ +P TV+ C V +T++K+GY AVQ+G + K K+ +K
Sbjct: 3 GLLGKKIGMTSVFSAEGKNVPCTVIEAGPCVVTQVKTVEKDGYEAVQLGFQDKKEKHTTK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P+ G F V+PKK L EF ++ + L +G + F VDV G + GKGF G
Sbjct: 63 PLMGHFKKAGVTPKKHLAEF--KEFETELNLGDTVTVELFNDAAFVDVVGTSKGKGFQGV 120
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G + THG R GS G P +VFK +M G++GG+RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180
Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
+ L+L+KG VPG K S +++
Sbjct: 181 IAEHNLLLIKGSVPGC-KGSIVII 203
>gi|160888399|ref|ZP_02069402.1| hypothetical protein BACUNI_00812 [Bacteroides uniformis ATCC 8492]
gi|270294752|ref|ZP_06200953.1| 50S ribosomal protein L3 [Bacteroides sp. D20]
gi|317477751|ref|ZP_07936944.1| 50S ribosomal protein L3 [Bacteroides sp. 4_1_36]
gi|156862076|gb|EDO55507.1| hypothetical protein BACUNI_00812 [Bacteroides uniformis ATCC 8492]
gi|270273999|gb|EFA19860.1| 50S ribosomal protein L3 [Bacteroides sp. D20]
gi|316906096|gb|EFV27857.1| 50S ribosomal protein L3 [Bacteroides sp. 4_1_36]
Length = 205
Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 83/204 (40%), Positives = 124/204 (60%), Gaps = 4/204 (1%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT V++ EG+ +P TV+ C V +T++K+GY AVQ+G + K K+ +K
Sbjct: 3 GLLGKKIGMTSVFSAEGKNVPCTVIEAGPCVVTQVKTVEKDGYEAVQLGFQDKKEKHTTK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P+ G F V+PKK L EF ++ + L +G + F VDV G + GKGF G
Sbjct: 63 PLMGHFKKAGVTPKKHLAEF--KEFETELNLGDTVTVELFNDATFVDVVGTSKGKGFQGV 120
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G + THG R GS G P +VFK +M G++GG+RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180
Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
+ L+L+KG VPG K S +++
Sbjct: 181 IAEHNLLLIKGSVPGC-KGSIVII 203
>gi|28377832|ref|NP_784724.1| 50S ribosomal protein L3 [Lactobacillus plantarum WCFS1]
gi|300767821|ref|ZP_07077731.1| 50S ribosomal protein L3 [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|308180011|ref|YP_003924139.1| 50S ribosomal protein L3 [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|42559624|sp|Q88XY6|RL3_LACPL RecName: Full=50S ribosomal protein L3
gi|28270665|emb|CAD63571.1| ribosomal protein L3 [Lactobacillus plantarum WCFS1]
gi|300494806|gb|EFK29964.1| 50S ribosomal protein L3 [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|308045502|gb|ADN98045.1| 50S ribosomal protein L3 [Lactobacillus plantarum subsp. plantarum
ST-III]
Length = 209
Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 75/212 (35%), Positives = 117/212 (55%), Gaps = 5/212 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT V+ G +PVTV+ + V+ +T++ +GY A+Q+G + +
Sbjct: 3 TKGILGKKVGMTQVFTESGELVPVTVVEVQPNVVLQVKTVENDGYEAIQLGVDDKREVLT 62
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP +G + +PK+ + E R + D VG F G VDVTG+T G G+
Sbjct: 63 NKPAQGHAAKAKTTPKRFIREIRNVELGD-YTVGDEVKADIFAAGDAVDVTGITKGHGYQ 121
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G + + HG S HR GS G RVFK KK+ GRMG ++ T++NL++V
Sbjct: 122 GNIHKDGQSRGPMAHG-SRYHRRPGSMGAI--INRVFKGKKLPGRMGNHQRTMQNLQIVR 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D + ++L+KG VPGA K S++ V+ S KS
Sbjct: 179 ADVENNVLLIKGNVPGANK-SFVTVKTSVKSK 209
>gi|21672770|ref|NP_660837.1| 50S ribosomal protein L3 [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
gi|25009109|sp|Q8K950|RL3_BUCAP RecName: Full=50S ribosomal protein L3
gi|21623417|gb|AAM68048.1| 50S ribosomal protein L3 [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
Length = 209
Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 91/210 (43%), Positives = 127/210 (60%), Gaps = 2/210 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +KLGM+ ++ EG IP+TV+ + ++ R + + Y A+QV G K+ +
Sbjct: 1 MIGLVGKKLGMSRIFTKEGSSIPITVIQIQENRITQIRNIKTDKYYAIQVTTGLKKLNRL 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
KP G F V P + L+EFR+ ++ +G + F + VDVTG++ GKGFS
Sbjct: 61 KKPESGHFLKSGVIPGRGLWEFRINNNE-KFQIGQSIKINIFNDIKKVDVTGISKGKGFS 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PGRVFK KKMAG +G NRVTV+NL +V
Sbjct: 120 GTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGRVFKGKKMAGHLGNNRVTVQNLNIVK 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+D R L+LVKG VPG S ++V+ + K
Sbjct: 180 IDQNRNLLLVKGAVPGP-TGSDLIVKPAIK 208
>gi|238922830|ref|YP_002936343.1| 50S ribosomal protein L3 [Eubacterium rectale ATCC 33656]
gi|259646545|sp|C4ZBD4|RL3_EUBR3 RecName: Full=50S ribosomal protein L3
gi|238874502|gb|ACR74209.1| 50S ribosomal protein L3 [Eubacterium rectale ATCC 33656]
gi|291523732|emb|CBK89319.1| LSU ribosomal protein L3P [Eubacterium rectale DSM 17629]
gi|291528802|emb|CBK94388.1| LSU ribosomal protein L3P [Eubacterium rectale M104/1]
Length = 227
Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 89/230 (38%), Positives = 122/230 (53%), Gaps = 19/230 (8%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV-- 58
M+ ++A K+GMT ++N +G +PVTVL C V +T++ +GY AVQVG G+ K
Sbjct: 1 MKKAILATKIGMTQIFNADGVLVPVTVLEAGPCVVTQIKTVENDGYSAVQVGFGDKKEKV 60
Query: 59 --------------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
V+K G F VS K+ + EF+ + D+ + F
Sbjct: 61 VEKDANGKKSVAHRHGVNKAQMGHFKKAGVSGKRFVREFKFENADE-YNLADEIKADIFA 119
Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
G VDVT ++ GKGF GA+KR HG S HR GS G P +VFK K M
Sbjct: 120 EGDKVDVTAISKGKGFQGAIKRLGQHRGPMAHG-SKFHRHQGSNGACSSPSKVFKGKGMP 178
Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
G MG +VT +NLEVV VD + L+L+KG VPGAKK + I V+++ KS
Sbjct: 179 GHMGSVKVTTQNLEVVRVDADKNLLLIKGAVPGAKK-ALITVKETTKSGK 227
>gi|28198353|ref|NP_778667.1| 50S ribosomal protein L3 [Xylella fastidiosa Temecula1]
gi|42559619|sp|Q87E82|RL3_XYLFT RecName: Full=50S ribosomal protein L3
gi|212288597|sp|B2I8G9|RL3_XYLF2 RecName: Full=50S ribosomal protein L3
gi|28056423|gb|AAO28316.1| 50S ribosomal protein L3 [Xylella fastidiosa Temecula1]
Length = 215
Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 98/209 (46%), Positives = 129/209 (61%), Gaps = 2/209 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G V RK GM+ V+ +G IPVT++ +VV +T D +GY AVQV G + V+K
Sbjct: 7 GFVGRKAGMSRVFLEDGCSIPVTLIEATANRVVQIKTSDVDGYDAVQVTVGSRRSVLVNK 66
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
P G F+ V + L+EFRV+K VGS S F VGQ VD+ G+T GKGF G
Sbjct: 67 PESGHFAKAKVEAGRGLWEFRVEKTQLGSYSVGSEVGLSIFAVGQKVDIQGITKGKGFQG 126
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRHNF ATHG S+SHR+ GS G RQ PGRVF KKM+G MG + +V+NLEV+ +
Sbjct: 127 TIKRHNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVKQSVQNLEVIKI 186
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
D +R LI V+G +PGA +L+R + K
Sbjct: 187 DVERCLIAVRGAIPGAS-GGDVLIRSASK 214
>gi|255530514|ref|YP_003090886.1| 50S ribosomal protein L3 [Pedobacter heparinus DSM 2366]
gi|255343498|gb|ACU02824.1| ribosomal protein L3 [Pedobacter heparinus DSM 2366]
Length = 205
Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 86/206 (41%), Positives = 129/206 (62%), Gaps = 4/206 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT +++ +G+ IP TV+ C V +T +K+GY++VQ+ EAK KN
Sbjct: 1 MSGIIGKKVGMTSIFDADGKNIPCTVIEAGPCVVTQVKTEEKDGYVSVQLSFDEAKEKNT 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+ P++G F+ +PK+KL EF + ++ L +G + + F G VDV G + GKGF
Sbjct: 61 TMPLKGHFAKAKTTPKRKLVEF--EPFEESLNLGDTVTVNIFNEGDFVDVVGTSKGKGFQ 118
Query: 122 GAMKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH F G THG R+ GS G P RVFK +MAGRMGG+RV V+NL+V+
Sbjct: 119 GVVKRHGFGGVGGQTHGQHNRMRAPGSLGAASYPSRVFKGMRMAGRMGGDRVKVQNLQVL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
V + L++V G VPGA K S++++
Sbjct: 179 KVYADQNLVVVSGSVPGA-KGSYVIL 203
>gi|148238770|ref|YP_001224157.1| 50S ribosomal protein L3 [Synechococcus sp. WH 7803]
gi|166234602|sp|A5GIU5|RL3_SYNPW RecName: Full=50S ribosomal protein L3
gi|147847309|emb|CAK22860.1| 50S ribosomal protein L3 [Synechococcus sp. WH 7803]
Length = 218
Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 85/219 (38%), Positives = 131/219 (59%), Gaps = 4/219 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGM+ +++ +G+ +PVT++ C++ +T + +GY AVQ+G GE + K
Sbjct: 1 MSIGILGKKLGMSQLFDEQGKAVPVTLIEAGPCRITQLKTTETDGYSAVQIGFGETRDKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP +G + + L E+RV D + L +G + S F GQ VDV+G T+G+GF
Sbjct: 61 VNKPAKGHLAKSGEGVLRHLSEYRVD-DVNGLELGGAVTVSDFEAGQKVDVSGDTMGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G KRH F THG S +HR GSTG PGR++ K+MAGR GG + T + L ++
Sbjct: 120 AGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKTTTRGLTIL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK-SAVNCKG 218
VD R L++VKG VPG + + +R + + A KG
Sbjct: 179 KVDSDRNLLVVKGSVPGKP-GALLNIRPANRVGAKPAKG 216
>gi|256827416|ref|YP_003151375.1| 50S ribosomal protein L3P [Cryptobacterium curtum DSM 15641]
gi|256583559|gb|ACU94693.1| LSU ribosomal protein L3P [Cryptobacterium curtum DSM 15641]
Length = 206
Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 85/209 (40%), Positives = 123/209 (58%), Gaps = 3/209 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M + + KLGMT +++ + +PVTV+ + +T + +GY AVQ+G G K +
Sbjct: 1 MINAIYGTKLGMTQIFSEDDEVVPVTVIQAAPNTICQLKTKETDGYEAVQLGFGAIKPQK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V++PM G F+ V P + L E RV +D +G + S F + VDVT + GKGF
Sbjct: 61 VNRPMGGHFAKQGVDPVRHLREVRV-EDASAHSLGEKVTVSLFADAKKVDVTATSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G M+R+NF G HG HR+ GS G P RVFK ++ G MG + VTVKNL+VV
Sbjct: 120 AGVMRRYNFRGGPGGHGAH-FHRAPGSVGMCATPSRVFKGLRLPGHMGVDTVTVKNLDVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
+D+++ LILVKG VPG KN+ + VR +
Sbjct: 179 RIDEEQNLILVKGAVPGG-KNAMVRVRLA 206
>gi|187734815|ref|YP_001876927.1| ribosomal protein L3 [Akkermansia muciniphila ATCC BAA-835]
gi|226725123|sp|B2UMU0|RL3_AKKM8 RecName: Full=50S ribosomal protein L3
gi|187424867|gb|ACD04146.1| ribosomal protein L3 [Akkermansia muciniphila ATCC BAA-835]
Length = 211
Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats.
Identities = 87/213 (40%), Positives = 125/213 (58%), Gaps = 3/213 (1%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
M G++ +K+GMT +++ G +PVTV+ + +T DK+GY A+QV K
Sbjct: 1 MALGLIGKKVGMTRLFDQESGAMVPVTVIDVKGNTFAQIKTEDKDGYNAIQVAFDAQKES 60
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KP G F + + P K L EFRV+ + F+ GQ VDV G + GKG
Sbjct: 61 RVAKPQAGHFKKLGIQPTKLLKEFRVEASELPAEGAKDPGVDLFSAGQWVDVIGTSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F GAM+RHNF G A HG S+ HR G G PGRV+KN+KM G+MG + TV+NL+V
Sbjct: 121 FQGAMRRHNFHGSPAAHG-SMMHRRTGGVGGCSTPGRVWKNQKMPGQMGNAKRTVQNLKV 179
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V+V + +IL+ G VPGA + S++++R + K
Sbjct: 180 VAVRPEDNVILISGAVPGA-RGSYLVIRPAKKK 211
>gi|89893217|ref|YP_516704.1| 50S ribosomal protein L3 [Desulfitobacterium hafniense Y51]
gi|123397902|sp|Q250N2|RL3_DESHY RecName: Full=50S ribosomal protein L3
gi|89332665|dbj|BAE82260.1| 50S ribosomal protein L3 [Desulfitobacterium hafniense Y51]
Length = 212
Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats.
Identities = 86/212 (40%), Positives = 124/212 (58%), Gaps = 4/212 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT V+ EG IPVTV+ C V+ +T +GY A+QVG G + +
Sbjct: 5 SKGILGKKVGMTQVFTEEGHLIPVTVVEAGPCYVIQKKTKATDGYNAIQVGFGALRERLA 64
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP +G + +V P + + EFRV D + +G V + F G VDV G++ GKGF+
Sbjct: 65 NKPQKGHVAKASVKPMRYIREFRVD-DVEAYEIGQVITAELFAAGDAVDVVGISKGKGFA 123
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRH HG R+ + P RVFK + + GRMGG RVTV+NL+VV
Sbjct: 124 GMIKRHGASRGPMKHGSKYHRRTGSLGA--KGPARVFKGRNLPGRMGGERVTVQNLKVVR 181
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD + +ILVKG VPGAKK S ++++ S K+
Sbjct: 182 VDADKNMILVKGAVPGAKK-SLLILKPSVKAK 212
>gi|226293678|gb|EEH49098.1| 54S ribosomal protein L9 [Paracoccidioides brasiliensis Pb18]
Length = 295
Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats.
Identities = 96/217 (44%), Positives = 137/217 (63%), Gaps = 3/217 (1%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
+R+GV+A K GMT +++ G+R P T+L LD QV+ H+TL K+GY AVQVG G +
Sbjct: 72 LRTGVLAIKKGMTAIFDQETGKRTPCTILQLDQVQVISHKTLKKHGYFAVQVGCGWKHER 131
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V++PM G F++ V+PK+ + EFRV+ + LLP+G V + +F GQ VD + G G
Sbjct: 132 AVTRPMLGHFAANGVAPKRHIHEFRVKDESGLLPIGEVINADWFQEGQFVDARSNSRGMG 191
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ-DPGRVFKNKKMAGRMGGNRVTVKNLE 178
F G MKRH F G +HGVS++HRS GS G Q RV KKMAG MG +VT++NL
Sbjct: 192 FEGVMKRHGFHGQDRSHGVSLAHRSLGSAGPSQGGGSRVHPGKKMAGNMGNEQVTLQNLR 251
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
V+ VD ++G+++V G V G K + ++D+ K
Sbjct: 252 VLKVDAEKGIVVVNGSVSGP-KGCIVKLQDAIKKPWP 287
>gi|167764372|ref|ZP_02436497.1| hypothetical protein BACSTE_02756 [Bacteroides stercoris ATCC
43183]
gi|167697777|gb|EDS14356.1| hypothetical protein BACSTE_02756 [Bacteroides stercoris ATCC
43183]
Length = 205
Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats.
Identities = 83/204 (40%), Positives = 124/204 (60%), Gaps = 4/204 (1%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT V++ EG+ +P TV+ C V +T++K+GY AVQ+G + K K+ +K
Sbjct: 3 GLLGKKIGMTSVFSAEGKNVPCTVIEAGPCVVTQVKTVEKDGYQAVQLGFQDKKEKHTTK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P+ G F V+PKK L EF ++ + L +G + F VDV G + GKGF G
Sbjct: 63 PLMGHFKKAGVTPKKHLAEF--KEFETELNLGDTVTVELFEGADYVDVVGTSKGKGFQGV 120
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G + THG R GS G P +VFK +M G++GG+RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180
Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
+ L+L+KG VPG K S +++
Sbjct: 181 IAEHNLLLIKGSVPGC-KGSIVII 203
>gi|258406185|ref|YP_003198927.1| 50S ribosomal protein L3 [Desulfohalobium retbaense DSM 5692]
gi|257798412|gb|ACV69349.1| 50S ribosomal protein L3 [Desulfohalobium retbaense DSM 5692]
Length = 209
Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats.
Identities = 88/204 (43%), Positives = 121/204 (59%), Gaps = 2/204 (0%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ +KLGMT V+ +G IPVTV+ C V+ +T + +GY A+Q+GA V+KP
Sbjct: 6 LIGKKLGMTRVFGEDGTVIPVTVIQAGPCPVIQVKTAETDGYTALQIGADPLPAHRVTKP 65
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+G + +KL E RV +D G S FT+G+ +DVTG + G+GF+GAM
Sbjct: 66 QQGHQAKAGKGCFRKLQEVRV-EDAAEYEPGQELSVDMFTIGERIDVTGKSKGRGFAGAM 124
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR NFGG +THG HRS G+ G P R+FK KKM G MG RV+V+N EVV +
Sbjct: 125 KRWNFGGSPSTHGHEKVHRSTGAVGQCAAPSRIFKGKKMPGHMGAQRVSVRNAEVVDIRP 184
Query: 185 KRGLILVKGCVPGAKKNSWILVRD 208
+ LIL++G VPG KN I +R
Sbjct: 185 EDNLILLRGQVPGP-KNGVITLRK 207
>gi|182680994|ref|YP_001829154.1| 50S ribosomal protein L3 [Xylella fastidiosa M23]
gi|182631104|gb|ACB91880.1| ribosomal protein L3 [Xylella fastidiosa M23]
gi|307579463|gb|ADN63432.1| 50S ribosomal protein L3 [Xylella fastidiosa subsp. fastidiosa
GB514]
Length = 210
Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats.
Identities = 98/209 (46%), Positives = 129/209 (61%), Gaps = 2/209 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G V RK GM+ V+ +G IPVT++ +VV +T D +GY AVQV G + V+K
Sbjct: 2 GFVGRKAGMSRVFLEDGCSIPVTLIEATANRVVQIKTSDVDGYDAVQVTVGSRRSVLVNK 61
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
P G F+ V + L+EFRV+K VGS S F VGQ VD+ G+T GKGF G
Sbjct: 62 PESGHFAKAKVEAGRGLWEFRVEKTQLGSYSVGSEVGLSIFAVGQKVDIQGITKGKGFQG 121
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRHNF ATHG S+SHR+ GS G RQ PGRVF KKM+G MG + +V+NLEV+ +
Sbjct: 122 TIKRHNFRMGDATHGNSLSHRAPGSLGQRQTPGRVFPGKKMSGHMGAVKQSVQNLEVIKI 181
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
D +R LI V+G +PGA +L+R + K
Sbjct: 182 DVERCLIAVRGAIPGAS-GGDVLIRSASK 209
>gi|153805957|ref|ZP_01958625.1| hypothetical protein BACCAC_00202 [Bacteroides caccae ATCC 43185]
gi|149130634|gb|EDM21840.1| hypothetical protein BACCAC_00202 [Bacteroides caccae ATCC 43185]
Length = 205
Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats.
Identities = 81/204 (39%), Positives = 123/204 (60%), Gaps = 4/204 (1%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G + K K+ +K
Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYAAVQLGFQDKKEKHTTK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P+ G F V+PK+ L EF ++ + L +G + F VDV G + GKGF G
Sbjct: 63 PLMGHFKRAGVTPKRHLAEF--KEFETELNLGDTVTVELFNDANFVDVVGTSKGKGFQGV 120
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G + THG R GS G P +VFK +M G++GG+RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180
Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
L+L+KG +PG K S +L+
Sbjct: 181 IADHNLLLIKGSIPGC-KGSIVLI 203
>gi|255690003|ref|ZP_05413678.1| 50S ribosomal protein L3 [Bacteroides finegoldii DSM 17565]
gi|260624611|gb|EEX47482.1| 50S ribosomal protein L3 [Bacteroides finegoldii DSM 17565]
Length = 205
Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats.
Identities = 82/204 (40%), Positives = 123/204 (60%), Gaps = 4/204 (1%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G + K K+ +K
Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYEAVQLGFQDKKEKHTTK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P+ G F V+PK+ L EF ++ + L +G + F VDV G + GKGF G
Sbjct: 63 PLMGHFKKAGVTPKRHLAEF--KEFETELNLGDTVTVEMFNDANFVDVVGTSKGKGFQGV 120
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G + THG R GS G P +VFK +M G++GG+RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180
Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
L+LVKG +PG K S +L+
Sbjct: 181 IADHNLLLVKGSIPGC-KGSIVLI 203
>gi|324528045|gb|ADY48869.1| 50S ribosomal protein L3 [Ascaris suum]
Length = 231
Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats.
Identities = 78/221 (35%), Positives = 125/221 (56%), Gaps = 6/221 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RKLGM+ ++ +G IPVT++ ++ + +T + +GY A+Q+G + K K+
Sbjct: 1 MMKGLVGRKLGMSQMFATDGTIIPVTMIEIEPNVITQIKTTETDGYNAIQIGVEDKKQKH 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
++P G + K++++ +D+ +G + F+ G++VDV G + GK
Sbjct: 61 TTQPEMGHVKKAGLETGKRVYKEFTVGEDEVSNYTLGQELTVDIFSDGEIVDVQGTSKGK 120
Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
GF GA+KRHN +HG S HR GS G VFK K + G MG VT +NLE
Sbjct: 121 GFQGAIKRHNQSRGPMSHG-SRYHRRPGSMGAVAPQ--VFKGKNLPGHMGSKTVTTQNLE 177
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
+V VD KR ++++KG VPGAKK S++ ++ + K + K
Sbjct: 178 IVKVDTKRNVLIIKGNVPGAKK-SFVTIKAAVKGNGRAQNK 217
>gi|77409988|ref|ZP_00786570.1| ribosomal protein L3 [Streptococcus agalactiae COH1]
gi|77171404|gb|EAO74691.1| ribosomal protein L3 [Streptococcus agalactiae COH1]
Length = 208
Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats.
Identities = 92/214 (42%), Positives = 130/214 (60%), Gaps = 6/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + +
Sbjct: 1 MTKGIFGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EF+ + L VG+ S F G +VDVTG + GKGF
Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFKNIEG---LEVGAELSVEQFEAGDVVDVTGTSKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFKNK++AGRMGGNRVTV+NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTVQNLEIV 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V ++ ++L+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNVVLIKGNVPGAKK-SLITIKSAVKAAK 208
>gi|238492064|ref|XP_002377269.1| 50S ribosomal protein L3 [Aspergillus flavus NRRL3357]
gi|220697682|gb|EED54023.1| 50S ribosomal protein L3 [Aspergillus flavus NRRL3357]
Length = 296
Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats.
Identities = 97/216 (44%), Positives = 137/216 (63%), Gaps = 3/216 (1%)
Query: 2 RSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
R+G +A K GMT +Y+ G+RI TVL LD +V+ H+T ++GY AVQVG+G N
Sbjct: 72 RTGAIAIKKGMTALYDTETGKRIACTVLQLDRVEVISHKTRQQHGYFAVQVGSGWKHPNN 131
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++K + G FS +SPK+ +FEFRV+ ++ LLPVG + +F GQ VD T GKGF
Sbjct: 132 LTKSLLGHFSVNGISPKRHIFEFRVRDENGLLPVGQAINADWFQEGQYVDARSNTKGKGF 191
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ-DPGRVFKNKKMAGRMGGNRVTVKNLEV 179
+G MKRH FGG +HGVS++HRS GS G Q RV+ KKMAG MG + TV+NL++
Sbjct: 192 AGVMKRHGFGGQDRSHGVSLTHRSLGSAGPSQGGGSRVYPGKKMAGNMGNEQNTVQNLKI 251
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
+ VD + G+++V G V G K + ++D+ K
Sbjct: 252 LKVDSQNGIVVVNGAVSGP-KGCIVRIQDAIKKPWP 286
>gi|289548391|ref|YP_003473379.1| 50S ribosomal protein L3 [Thermocrinis albus DSM 14484]
gi|289182008|gb|ADC89252.1| 50S ribosomal protein L3 [Thermocrinis albus DSM 14484]
Length = 234
Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats.
Identities = 90/209 (43%), Positives = 122/209 (58%), Gaps = 2/209 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ K+GMT V+ +G +PVTV+ ++ VV R +K+GY AVQVGA AK KN
Sbjct: 1 MPIGLIGTKVGMTRVFLKDGTAVPVTVIKIEPNYVVAVRRQEKDGYNAVQVGAFPAKEKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP G + P ++L EFRV D + F G+LVDV G++ G+GF
Sbjct: 61 LTKPELGHLKKAGLPPLRRLKEFRVDDPDQYQVGQELRVEQIFQPGELVDVVGISKGRGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GAMKR +FGG +HG HR+ GS G R DPGRV+K K+MAG G + V+ L VV
Sbjct: 121 AGAMKRWDFGGFPKSHG-HRYHRAVGSIGQRTDPGRVWKGKRMAGHWGAETIRVQALLVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
V + L+LVKG VPG + V S
Sbjct: 180 DVVPEENLLLVKGSVPG-HNRGIVFVEKS 207
>gi|224537817|ref|ZP_03678356.1| hypothetical protein BACCELL_02704 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520503|gb|EEF89608.1| hypothetical protein BACCELL_02704 [Bacteroides cellulosilyticus
DSM 14838]
Length = 205
Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats.
Identities = 83/204 (40%), Positives = 124/204 (60%), Gaps = 4/204 (1%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT V++ EG+ +P TV+ C V ++++K+GY AVQ+G + K K+ +K
Sbjct: 3 GLLGKKIGMTSVFSAEGKNVPCTVIEAGPCVVTQVKSVEKDGYAAVQLGFQDKKEKHTTK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P+ G F V+PKK L EF ++ + L +G + F VDV G + GKGF G
Sbjct: 63 PLMGHFKKAGVTPKKHLAEF--KEFETELNLGDTVTVELFNDVTFVDVIGTSKGKGFQGV 120
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G +ATHG R GS G P +VFK +M G++GG+RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQATHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180
Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
L+L+KG VPG K S +++
Sbjct: 181 LPDHNLLLIKGSVPGC-KGSIVII 203
>gi|169774031|ref|XP_001821484.1| 54S ribosomal protein L9 [Aspergillus oryzae RIB40]
gi|83769345|dbj|BAE59482.1| unnamed protein product [Aspergillus oryzae]
Length = 296
Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats.
Identities = 97/216 (44%), Positives = 137/216 (63%), Gaps = 3/216 (1%)
Query: 2 RSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
R+G +A K GMT +Y+ G+RI TVL LD +V+ H+T ++GY AVQVG+G N
Sbjct: 72 RTGAIAIKKGMTALYDTETGKRIACTVLQLDRVEVISHKTRQQHGYFAVQVGSGWKHPNN 131
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++K + G FS +SPK+ +FEFRV+ ++ LLPVG + +F GQ VD T GKGF
Sbjct: 132 LTKSLLGHFSVNGISPKRHIFEFRVRDENGLLPVGQAINADWFQEGQYVDARSNTKGKGF 191
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ-DPGRVFKNKKMAGRMGGNRVTVKNLEV 179
+G MKRH FGG +HGVS++HRS GS G Q RV+ KKMAG MG + TV+NL++
Sbjct: 192 AGVMKRHGFGGQDRSHGVSLTHRSLGSAGPSQGGGSRVYPGKKMAGNMGNEQNTVQNLKI 251
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
+ VD + G+++V G V G K + ++D+ K
Sbjct: 252 LKVDSQNGIVVVNGAVSGP-KGCIVRIQDAIKKPWP 286
>gi|160883064|ref|ZP_02064067.1| hypothetical protein BACOVA_01027 [Bacteroides ovatus ATCC 8483]
gi|260175416|ref|ZP_05761828.1| 50S ribosomal protein L3 [Bacteroides sp. D2]
gi|299144624|ref|ZP_07037692.1| 50S ribosomal protein L3 [Bacteroides sp. 3_1_23]
gi|315923646|ref|ZP_07919886.1| 50S ribosomal protein L3 [Bacteroides sp. D2]
gi|156111536|gb|EDO13281.1| hypothetical protein BACOVA_01027 [Bacteroides ovatus ATCC 8483]
gi|298515115|gb|EFI38996.1| 50S ribosomal protein L3 [Bacteroides sp. 3_1_23]
gi|313697521|gb|EFS34356.1| 50S ribosomal protein L3 [Bacteroides sp. D2]
Length = 205
Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats.
Identities = 83/204 (40%), Positives = 123/204 (60%), Gaps = 4/204 (1%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G + K K+ +K
Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYAAVQLGFQDKKEKHTTK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P+ G F V+PK+ L EF+ D L +G + F VDV G + GKGF G
Sbjct: 63 PLMGHFKRAGVTPKRHLAEFKEFGTD--LNLGDTITVEMFNDANFVDVVGTSKGKGFQGV 120
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G +ATHG R GS G P +VFK +M G++GG+RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQATHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180
Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
L+L+KG +PG K S +L+
Sbjct: 181 IADHNLLLIKGSIPGC-KGSIVLI 203
>gi|329956703|ref|ZP_08297276.1| 50S ribosomal protein L3 [Bacteroides clarus YIT 12056]
gi|328524075|gb|EGF51151.1| 50S ribosomal protein L3 [Bacteroides clarus YIT 12056]
Length = 205
Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats.
Identities = 83/204 (40%), Positives = 124/204 (60%), Gaps = 4/204 (1%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT V++ EG+ +P TV+ C V +T++K+GY AVQ+G + K K+ +K
Sbjct: 3 GLLGKKIGMTSVFSAEGKNVPCTVIEAGPCVVTQVKTVEKDGYQAVQLGFQDKKEKHTTK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P+ G F V+PKK L EF ++ + L +G + F VDV G + GKGF G
Sbjct: 63 PLMGHFKKAGVTPKKHLAEF--KEFETELNLGDTVTVELFEGVDFVDVVGTSKGKGFQGV 120
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G + THG R GS G P +VFK +M G++GG+RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180
Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
+ L+L+KG VPG K S +++
Sbjct: 181 IAEHNLLLIKGSVPGC-KGSIVII 203
>gi|126697640|ref|YP_001086537.1| 50S ribosomal protein L3 [Clostridium difficile 630]
gi|254973731|ref|ZP_05270203.1| 50S ribosomal protein L3 [Clostridium difficile QCD-66c26]
gi|255091120|ref|ZP_05320598.1| 50S ribosomal protein L3 [Clostridium difficile CIP 107932]
gi|255099232|ref|ZP_05328209.1| 50S ribosomal protein L3 [Clostridium difficile QCD-63q42]
gi|255305015|ref|ZP_05349187.1| 50S ribosomal protein L3 [Clostridium difficile ATCC 43255]
gi|255312775|ref|ZP_05354358.1| 50S ribosomal protein L3 [Clostridium difficile QCD-76w55]
gi|255515534|ref|ZP_05383210.1| 50S ribosomal protein L3 [Clostridium difficile QCD-97b34]
gi|255648629|ref|ZP_05395531.1| 50S ribosomal protein L3 [Clostridium difficile QCD-37x79]
gi|255654162|ref|ZP_05399571.1| 50S ribosomal protein L3 [Clostridium difficile QCD-23m63]
gi|260681846|ref|YP_003213131.1| 50S ribosomal protein L3 [Clostridium difficile CD196]
gi|260685444|ref|YP_003216577.1| 50S ribosomal protein L3 [Clostridium difficile R20291]
gi|296449799|ref|ZP_06891568.1| 50S ribosomal protein L3 [Clostridium difficile NAP08]
gi|296877863|ref|ZP_06901885.1| 50S ribosomal protein L3 [Clostridium difficile NAP07]
gi|306518752|ref|ZP_07405099.1| 50S ribosomal protein L3 [Clostridium difficile QCD-32g58]
gi|123174670|sp|Q18CG0|RL3_CLOD6 RecName: Full=50S ribosomal protein L3
gi|115249077|emb|CAJ66888.1| 50S ribosomal protein L3 [Clostridium difficile]
gi|260208009|emb|CBA60186.1| 50S ribosomal protein L3 [Clostridium difficile CD196]
gi|260211460|emb|CBE01579.1| 50S ribosomal protein L3 [Clostridium difficile R20291]
gi|296261397|gb|EFH08223.1| 50S ribosomal protein L3 [Clostridium difficile NAP08]
gi|296431163|gb|EFH16988.1| 50S ribosomal protein L3 [Clostridium difficile NAP07]
Length = 209
Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats.
Identities = 88/213 (41%), Positives = 123/213 (57%), Gaps = 4/213 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT ++ +G IPVT + V +T+DK+GY A+Q+G +AK K +
Sbjct: 1 MKGILGKKVGMTQIFTDKGVVIPVTAVEAGPMVVTQIKTVDKDGYNAIQIGFEDAKEKAL 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP +G ++ NV K + VG F G +DVTG++ GKGF
Sbjct: 61 NKPKKGHLAAANVLKKHLKEFRVDS--VEGYTVGQEIKADVFEAGAKIDVTGISKGKGFQ 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRH THG S HR GS G PGRVFKNKK+AG MG +VTV+NLEVV
Sbjct: 119 GPIKRHGQSRGPETHG-SRYHRRPGSMGACSYPGRVFKNKKLAGHMGSVKVTVQNLEVVK 177
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VD + LILVKG +PGA K S + ++++ K +
Sbjct: 178 VDADKNLILVKGAIPGA-KGSVVTIKEAIKVSK 209
>gi|312144247|ref|YP_003995693.1| 50S ribosomal protein L3 [Halanaerobium sp. 'sapolanicus']
gi|311904898|gb|ADQ15339.1| 50S ribosomal protein L3 [Halanaerobium sp. 'sapolanicus']
Length = 206
Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats.
Identities = 92/210 (43%), Positives = 127/210 (60%), Gaps = 5/210 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M ++ +KLGMT + G +PVTV+ C V +T +K+GY AVQ+G GE K
Sbjct: 1 MAKAILGKKLGMTQYFKDNGDVVPVTVVEAGPCVVTQIKTTEKDGYDAVQLGFGEVKKHR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP G F S N+ PKK L EF+ D L GS + F VG +V+V+G++ GKGF
Sbjct: 61 LNKPKLGQFESRNLEPKKYLREFKGLDLD--LSEGSEVAADIFEVGDIVNVSGVSKGKGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR N +HG S HR+ GS G D RVFK KKM GRMG NRVT +NLE+V
Sbjct: 119 QGNIKRWNHHSGPMSHG-SHFHRAPGSIG-SVDARRVFKGKKMPGRMGHNRVTEENLEIV 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
VD +R ++L+ G VPG+KK + + ++ +
Sbjct: 177 KVDLERNVLLIAGSVPGSKK-TILEIKSAK 205
>gi|150025407|ref|YP_001296233.1| 50S ribosomal protein L3 [Flavobacterium psychrophilum JIP02/86]
gi|166233142|sp|A6GZ99|RL3_FLAPJ RecName: Full=50S ribosomal protein L3
gi|149771948|emb|CAL43422.1| 50S ribosomal protein L3 [Flavobacterium psychrophilum JIP02/86]
Length = 205
Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats.
Identities = 83/208 (39%), Positives = 124/208 (59%), Gaps = 4/208 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ RK+GMT +++ G+ IP TV+ C V RT+ +GY A+Q+G + K+
Sbjct: 1 MSGLIGRKIGMTSIFDENGKNIPCTVIEAGPCVVTQVRTIGVDGYEALQLGFDDKNEKHS 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+K G F KKK+ EF+ + L G V S F+ G+ VD+ G++ GKGF
Sbjct: 61 TKADLGHFKKAGTVAKKKVVEFQDFVSEHKL--GDVISVDLFSEGEFVDIQGVSKGKGFQ 118
Query: 122 GAMKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH F G +ATHG R+ GS G P RVFK +MAGRMGG+ V V+NL V+
Sbjct: 119 GVVKRHGFGGVGQATHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGGDNVKVQNLRVL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
V ++ L+++KGC+PG NS+++++
Sbjct: 179 KVVAEKNLLVIKGCIPGC-NNSYVIIQK 205
>gi|254556017|ref|YP_003062434.1| 50S ribosomal protein L3 [Lactobacillus plantarum JDM1]
gi|254044944|gb|ACT61737.1| 50S ribosomal protein L3 [Lactobacillus plantarum JDM1]
Length = 209
Score = 201 bits (511), Expect = 5e-50, Method: Composition-based stats.
Identities = 75/212 (35%), Positives = 117/212 (55%), Gaps = 5/212 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT V+ G +PVTV+ + V+ +T++ +GY A+Q+G + +
Sbjct: 3 TKGILGQKVGMTQVFTESGELVPVTVVEVQPNVVLQVKTVENDGYEAIQLGVDDKREVLT 62
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP +G + +PK+ + E R + D VG F G VDVTG+T G G+
Sbjct: 63 NKPAQGHAAKAKTTPKRFIREIRNVELGD-YTVGDEVKADIFAAGDAVDVTGITKGHGYQ 121
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G + + HG S HR GS G RVFK KK+ GRMG ++ T++NL++V
Sbjct: 122 GNIHKDGQSRGPMAHG-SRYHRRPGSMGAI--INRVFKGKKLPGRMGNHQRTMQNLQIVR 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D + ++L+KG VPGA K S++ V+ S KS
Sbjct: 179 ADVENNVLLIKGNVPGANK-SFVTVKTSVKSK 209
>gi|313673467|ref|YP_004051578.1| LSU ribosomal protein l3p [Calditerrivibrio nitroreducens DSM
19672]
gi|312940223|gb|ADR19415.1| LSU ribosomal protein L3P [Calditerrivibrio nitroreducens DSM
19672]
Length = 212
Score = 201 bits (511), Expect = 6e-50, Method: Composition-based stats.
Identities = 94/215 (43%), Positives = 129/215 (60%), Gaps = 4/215 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEA-KVK 59
M ++ RK+GMT ++ EG IPVTV+ CQVV +T +K+GY A+Q+G + K
Sbjct: 1 MLKALIGRKIGMTQIFTSEGNVIPVTVVQAGPCQVVQKKTTEKDGYNALQLGFDKILKEN 60
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
++KPM G F V K L EF+V+ D+ VG + S F G +VDV G++IGKG
Sbjct: 61 KINKPMGGHFKKHGVDAHKTLKEFKVENPDE-YQVGQEINVSVFAEGDIVDVQGVSIGKG 119
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KRH F G A HG S HR+ GS G R+ PG K KK+ GRMGG VTV+ LEV
Sbjct: 120 FQGVIKRHGFAGGPAAHG-SDFHRAPGSIGMREWPGETLKGKKLPGRMGGKTVTVQKLEV 178
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V V + L+L+KG +PG NS + ++++ K
Sbjct: 179 VKVLPDKNLLLIKGAIPG-HDNSIVFIKETTKKKK 212
>gi|224477220|ref|YP_002634826.1| 50S ribosomal protein L3 [Staphylococcus carnosus subsp. carnosus
TM300]
gi|254803691|sp|B9DM19|RL3_STACT RecName: Full=50S ribosomal protein L3
gi|222421827|emb|CAL28641.1| 50S ribosomal protein L3 [Staphylococcus carnosus subsp. carnosus
TM300]
Length = 220
Score = 201 bits (511), Expect = 6e-50, Method: Composition-based stats.
Identities = 88/223 (39%), Positives = 120/223 (53%), Gaps = 11/223 (4%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK- 59
M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+QVG + +
Sbjct: 1 MTKGILGRKIGMTQVFGENGDLIPVTVVEAGQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60
Query: 60 -------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
+KP G +PK+ + EF+ D+ VG S F G ++DVT
Sbjct: 61 KDSKSNKYANKPAEGHAKKAGTAPKRFIREFKNINVDE-YEVGQEVSVDTFEAGDIIDVT 119
Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
G++ GKGF G +KRH HG S HR+ GS G D +VFK KM GRMGGN V
Sbjct: 120 GVSKGKGFQGNIKRHGHARGPMAHG-SHFHRAPGSVGMASDASKVFKGHKMPGRMGGNTV 178
Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
TV+NLEVV +D + +ILVKG VPG KK + ++ S K
Sbjct: 179 TVQNLEVVQIDAENNVILVKGNVPGPKKG-LVEIKTSIKKGNK 220
>gi|32475058|ref|NP_868052.1| 50S ribosomal protein L3 [Rhodopirellula baltica SH 1]
gi|42559597|sp|Q7UN20|RL3_RHOBA RecName: Full=50S ribosomal protein L3
gi|32445598|emb|CAD75599.1| 50S ribosomal protein L3 [Rhodopirellula baltica SH 1]
Length = 228
Score = 201 bits (511), Expect = 6e-50, Method: Composition-based stats.
Identities = 81/230 (35%), Positives = 123/230 (53%), Gaps = 23/230 (10%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M ++ RK+GMT ++ +G +PVTV+ C V+ R+ D++GY AVQ+G + +
Sbjct: 1 MSPSILGRKIGMTQIFLEDGTAVPVTVVQAGPCHVLQVRSKDRDGYEAVQMGFEDKPRRL 60
Query: 61 VSKPMRGFFS-------------------SVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS 101
+ RG + + P++ + EFR + + VG +
Sbjct: 61 AKRSERGQVATIESKRSKKRSAAGIEAPAKADCEPQRFVREFRGSSEAN---VGDTLTVE 117
Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
F + VD+TG + G+GF+G MKRHNF G RATHGV HR G TG P R FK K
Sbjct: 118 QFNDVKKVDITGTSKGRGFAGVMKRHNFAGQRATHGVKKCHRHAGGTGMSASPSRTFKGK 177
Query: 162 KMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+MAG+ G +VT +NLEVV VD + L++++G VPG ++ +R + K
Sbjct: 178 RMAGQYGNAKVTTRNLEVVRVDAENNLLMIRGAVPGP-NGGFVSIRQTNK 226
>gi|314934297|ref|ZP_07841656.1| 50S ribosomal protein L3 [Staphylococcus caprae C87]
gi|313652227|gb|EFS15990.1| 50S ribosomal protein L3 [Staphylococcus caprae C87]
Length = 220
Score = 201 bits (511), Expect = 6e-50, Method: Composition-based stats.
Identities = 94/223 (42%), Positives = 121/223 (54%), Gaps = 11/223 (4%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA------- 53
M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+QVG
Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60
Query: 54 -GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
G K +KP G + +PK+ + EFR D+ VG S F G ++DVT
Sbjct: 61 KGSKSNKYANKPAEGHAKKADTAPKRFIREFRNVNVDE-YEVGQEVSVDTFETGDIIDVT 119
Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
G++ GKGF GA+KRH HG S HR+ GS G D RVFK +KM GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHGQARGPMGHG-SHFHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178
Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
TV+NLEVV VD +ILVKG VPG KK + + S K
Sbjct: 179 TVQNLEVVQVDTDNSVILVKGNVPGPKKG-LVEITTSIKKGNK 220
>gi|260435636|ref|ZP_05789606.1| 50S ribosomal protein L3 [Synechococcus sp. WH 8109]
gi|260413510|gb|EEX06806.1| 50S ribosomal protein L3 [Synechococcus sp. WH 8109]
Length = 229
Score = 201 bits (511), Expect = 6e-50, Method: Composition-based stats.
Identities = 82/219 (37%), Positives = 127/219 (57%), Gaps = 4/219 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGM+ ++ +GR +PVT++ C++ + D +GY AVQ+G GE + K
Sbjct: 12 MSIGILGKKLGMSQFFDEQGRAVPVTLIEAGPCRITQLKNDDTDGYSAVQIGFGETREKL 71
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP +G + + L E+RV + L G + F GQ VDV+G T+G+GF
Sbjct: 72 INKPAQGHLNKSGEGLLRHLREYRVDSVEGLEIGG-AITVGDFEAGQKVDVSGDTVGRGF 130
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G KRH F THG S +HR GSTG PGR++ K+MAGR GG ++T + L ++
Sbjct: 131 AGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKITTRGLTIL 189
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK-SAVNCKG 218
VD + L++VKG VPG + + +R + + A KG
Sbjct: 190 KVDSEHNLLVVKGSVPGKP-GALLNIRPALRVGAKPAKG 227
>gi|225678845|gb|EEH17129.1| 50S ribosomal protein L3 [Paracoccidioides brasiliensis Pb03]
Length = 295
Score = 201 bits (511), Expect = 6e-50, Method: Composition-based stats.
Identities = 96/217 (44%), Positives = 137/217 (63%), Gaps = 3/217 (1%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
+R+GV+A K GMT +++ G+R P T+L LD QV+ H+TL K+GY AVQVG G +
Sbjct: 72 LRTGVLAIKKGMTAIFDQETGKRTPCTILQLDQVQVISHKTLKKHGYFAVQVGCGWKHER 131
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V++PM G F++ V+PK+ + EFRV+ + LLP+G V + +F GQ VD + G G
Sbjct: 132 AVTRPMLGHFAANGVAPKRHIHEFRVKDESGLLPIGEVINADWFQEGQFVDARSNSRGMG 191
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ-DPGRVFKNKKMAGRMGGNRVTVKNLE 178
F G MKRH F G +HGVS++HRS GS G Q RV KKMAG MG +VT++NL
Sbjct: 192 FEGVMKRHGFHGQDRSHGVSLAHRSLGSAGPSQGGGSRVHPGKKMAGNMGNEQVTLQNLR 251
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
V+ VD ++G+++V G V G K + ++D+ K
Sbjct: 252 VLKVDAEKGIVVVNGSVSGP-KGCIVKLQDAIKKPWP 287
>gi|315659227|ref|ZP_07912091.1| 50S ribosomal protein L3 [Staphylococcus lugdunensis M23590]
gi|315495652|gb|EFU83983.1| 50S ribosomal protein L3 [Staphylococcus lugdunensis M23590]
Length = 220
Score = 201 bits (511), Expect = 6e-50, Method: Composition-based stats.
Identities = 92/223 (41%), Positives = 122/223 (54%), Gaps = 11/223 (4%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK- 59
M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+QVG + +
Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60
Query: 60 -------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
+KP G +PK+ + EFR D+ VG S F G ++DVT
Sbjct: 61 KDAKSNKYATKPAEGHAKKAGTAPKRFIREFRNVNVDE-YEVGQEVSVDTFEAGDIIDVT 119
Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
G++ GKGF GA+KRH HG S HR+ GS G D RVFK +K GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHGQARGPMAHG-SHFHRAPGSVGMASDASRVFKGQKAPGRMGGNTV 178
Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
V+NLEVV VD + G+ILVKG VPGAKK + ++ S K
Sbjct: 179 IVQNLEVVQVDTENGVILVKGNVPGAKKG-LVEIKSSIKKGNK 220
>gi|255943633|ref|XP_002562584.1| Pc20g00200 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587319|emb|CAP85349.1| Pc20g00200 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 296
Score = 201 bits (511), Expect = 6e-50, Method: Composition-based stats.
Identities = 95/217 (43%), Positives = 134/217 (61%), Gaps = 3/217 (1%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
+R+G + K GMT +Y+ G+RIP TVL LD +V+ H+T +++GY AVQVGAG
Sbjct: 68 LRTGAIGIKKGMTAIYDPESGKRIPCTVLQLDRVEVISHKTRERHGYYAVQVGAGWKHPS 127
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
NV+K M G FS +SPK+ +FEFRV+ + L+PVG +F GQ VD T GKG
Sbjct: 128 NVTKSMLGHFSVNGISPKRHIFEFRVKDEAGLIPVGQSIEAGWFQEGQFVDARSNTKGKG 187
Query: 120 FSGAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
F+G MKRH FGG +HGVS++HR S + RV+ KKMAG MG + TV+NL+
Sbjct: 188 FAGVMKRHGFGGQDRSHGVSLTHRSMGSSGPGQGGGSRVYPGKKMAGNMGNTQNTVQNLK 247
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
++ VD + G+++V G V G K + ++D+ K
Sbjct: 248 ILKVDSENGIVVVSGAVSGP-KGCVVRIQDAIKKPWP 283
>gi|258648159|ref|ZP_05735628.1| 50S ribosomal protein L3 [Prevotella tannerae ATCC 51259]
gi|260852040|gb|EEX71909.1| 50S ribosomal protein L3 [Prevotella tannerae ATCC 51259]
Length = 206
Score = 201 bits (511), Expect = 6e-50, Method: Composition-based stats.
Identities = 79/204 (38%), Positives = 118/204 (57%), Gaps = 3/204 (1%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT V++ +G+ IP TV+ + C V ++++K GY AVQ+G EAK KN +
Sbjct: 3 GLLGKKIGMTSVFSADGKNIPCTVVEVGPCVVTQIKSVEKEGYNAVQLGFQEAKEKNTTA 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P+ G F +PK+ L EF + L ++ F + VDV G + G GF G
Sbjct: 63 PLLGHFKKAGTTPKRHLAEFTGFDKEFNL-GDTITVADVFEGVEYVDVVGTSKGHGFQGV 121
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F G ++THG R G+ G P +VFK +MAG+MG R T +NL+V+ V
Sbjct: 122 MKRHGFGGVGQSTHGQDDRARKPGAIGACSYPAKVFKGMRMAGQMGNRRATNQNLKVIKV 181
Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
+ L+L+KG VPG K S +++
Sbjct: 182 IPEHNLLLLKGSVPGC-KGSIVII 204
>gi|67923583|ref|ZP_00517055.1| Ribosomal protein L3 [Crocosphaera watsonii WH 8501]
gi|67854553|gb|EAM49840.1| Ribosomal protein L3 [Crocosphaera watsonii WH 8501]
Length = 213
Score = 201 bits (511), Expect = 6e-50, Method: Composition-based stats.
Identities = 88/210 (41%), Positives = 121/210 (57%), Gaps = 4/210 (1%)
Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
M G++ KLGMT ++ E G IPVTV+ C + +T + +GY AVQ+G E K K
Sbjct: 1 MSVGLLGTKLGMTQIFEEESGLAIPVTVVQAGPCTITQIKTTETDGYSAVQLGYLEVKEK 60
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
++KP G VN SP + L E+RV +D +G F+ G LVDV+G ++G+G
Sbjct: 61 ALTKPELGHLKKVNASPLRHLKEYRV-EDTASYQLGEAVKADIFSTGDLVDVSGTSMGRG 119
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G KRHNF THG S +HR GSTG PGRV+ KKMAG+ G + T + L V
Sbjct: 120 FAGYQKRHNFKRGNMTHG-SKNHRLPGSTGAGTTPGRVYPGKKMAGQYGAAKTTTRKLTV 178
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
V VD +R L+L+KG VPG + + +
Sbjct: 179 VRVDTERNLLLIKGAVPGKP-GGLLNITPA 207
>gi|320529796|ref|ZP_08030873.1| 50S ribosomal protein L3 [Selenomonas artemidis F0399]
gi|320137814|gb|EFW29719.1| 50S ribosomal protein L3 [Selenomonas artemidis F0399]
Length = 220
Score = 201 bits (511), Expect = 6e-50, Method: Composition-based stats.
Identities = 97/220 (44%), Positives = 130/220 (59%), Gaps = 5/220 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
+ ++ RKLGMT ++ EGR +PVTV+ N V+ ++T + +GY AVQ+G G+ K KN
Sbjct: 4 LAKAILGRKLGMTQIFTEEGRVVPVTVVESGNNLVLRNKTNETDGYNAVQIGFGDVKEKN 63
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP++G F V + + E R+ VG F G LVDV G + GKGF
Sbjct: 64 VTKPLKGQFEKAGVKAVRFIREMRLSAP-SKYNVGDTIGVDIFAEGDLVDVVGTSKGKGF 122
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTG--CRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
+G +KRHNF HG S SHR GSTG GRV K KK+ GRMGG RVTV+ L
Sbjct: 123 AGGIKRHNFARGPMGHG-SKSHREPGSTGAMISGPGGRVLKGKKLPGRMGGERVTVQRLT 181
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
VV VD R LIL+KG +PG KK +++++D+ K A K
Sbjct: 182 VVRVDTDRNLILIKGAIPGPKKG-FVVIKDTVKPAKAAKE 220
>gi|148544696|ref|YP_001272066.1| 50S ribosomal protein L3 [Lactobacillus reuteri DSM 20016]
gi|184154049|ref|YP_001842390.1| 50S ribosomal protein L3 [Lactobacillus reuteri JCM 1112]
gi|194466953|ref|ZP_03072940.1| ribosomal protein L3 [Lactobacillus reuteri 100-23]
gi|227363819|ref|ZP_03847926.1| ribosomal protein L3 [Lactobacillus reuteri MM2-3]
gi|227543623|ref|ZP_03973672.1| ribosomal protein L3 [Lactobacillus reuteri CF48-3A]
gi|300909348|ref|ZP_07126809.1| 50S ribosomal protein L3 [Lactobacillus reuteri SD2112]
gi|325683030|ref|ZP_08162546.1| 50S ribosomal protein L3 [Lactobacillus reuteri MM4-1A]
gi|212288404|sp|A5VLK5|RL3_LACRD RecName: Full=50S ribosomal protein L3
gi|226730527|sp|B2G8X8|RL3_LACRJ RecName: Full=50S ribosomal protein L3
gi|148531730|gb|ABQ83729.1| LSU ribosomal protein L3P [Lactobacillus reuteri DSM 20016]
gi|183225393|dbj|BAG25910.1| 50S ribosomal protein L3 [Lactobacillus reuteri JCM 1112]
gi|194453989|gb|EDX42886.1| ribosomal protein L3 [Lactobacillus reuteri 100-23]
gi|227071176|gb|EEI09492.1| ribosomal protein L3 [Lactobacillus reuteri MM2-3]
gi|227186463|gb|EEI66534.1| ribosomal protein L3 [Lactobacillus reuteri CF48-3A]
gi|300893213|gb|EFK86572.1| 50S ribosomal protein L3 [Lactobacillus reuteri SD2112]
gi|324977380|gb|EGC14331.1| 50S ribosomal protein L3 [Lactobacillus reuteri MM4-1A]
Length = 219
Score = 201 bits (511), Expect = 6e-50, Method: Composition-based stats.
Identities = 79/215 (36%), Positives = 121/215 (56%), Gaps = 5/215 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT V+ G +PVTV+ + V+ +T++ +GY AVQ+G + +
Sbjct: 1 MTKGILGKKVGMTQVFTDNGELVPVTVIDVTPNVVMQIKTVENDGYSAVQLGFDDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + E R + D + VG F G+ VDVTG T G G+
Sbjct: 61 SNKPEQGHAAKANTTPKRFIGEIRDAELGD-IKVGDEVKADVFAEGETVDVTGTTKGHGY 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G + + N HG S HR GS G RVFK K+ GRMGG VT+++L+VV
Sbjct: 120 QGNIHKDNQSRGPMAHG-SRYHRRPGSLGAI--INRVFKGMKLPGRMGGKTVTMQHLQVV 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
VD ++L+KG VPGA K S++ +++S K+
Sbjct: 177 KVDLDNNVLLIKGNVPGANK-SYVTIKNSVKANTK 210
>gi|112791754|gb|ABI22152.1| ribosomal protein L3 [Flavobacterium hibernum]
Length = 205
Score = 201 bits (511), Expect = 6e-50, Method: Composition-based stats.
Identities = 84/208 (40%), Positives = 123/208 (59%), Gaps = 4/208 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT +++ G+ IP TV+ C V RT +GY A+Q+G + K+
Sbjct: 1 MSGLIGKKIGMTSIFDENGKNIPCTVIEAGPCVVTQVRTKGVDGYEALQLGFDDKNEKHS 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+K G F KKK+ EF+ + L G + S F G+ VDV G++ GKGF
Sbjct: 61 TKAALGHFKKAGTVAKKKVVEFQDFATEQKL--GDLIDVSIFAEGEFVDVQGVSKGKGFQ 118
Query: 122 GAMKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH F G +ATHG R+ GS G P RVFK +MAGRMGG+ V V+NL V+
Sbjct: 119 GVVKRHGFGGVGQATHGQHNRLRAPGSVGASSYPSRVFKGMRMAGRMGGDNVKVQNLRVL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
V ++ L+++KGCVPG KNS+++++
Sbjct: 179 KVVAEKNLLVIKGCVPG-HKNSYVIIQK 205
>gi|15925240|ref|NP_372774.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus Mu50]
gi|15927830|ref|NP_375363.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus N315]
gi|21283898|ref|NP_646986.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus MW2]
gi|49484466|ref|YP_041690.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49487032|ref|YP_044253.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|82751839|ref|YP_417580.1| 50S ribosomal protein L3 [Staphylococcus aureus RF122]
gi|87161988|ref|YP_494839.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88196162|ref|YP_500979.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|150394755|ref|YP_001317430.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus JH1]
gi|151222364|ref|YP_001333186.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156980565|ref|YP_001442824.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus Mu3]
gi|161353538|ref|YP_187049.2| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus COL]
gi|221140148|ref|ZP_03564641.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|253317010|ref|ZP_04840223.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|253729916|ref|ZP_04864081.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253734341|ref|ZP_04868506.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
TCH130]
gi|255007030|ref|ZP_05145631.2| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257423735|ref|ZP_05600164.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
55/2053]
gi|257426413|ref|ZP_05602815.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
65-1322]
gi|257429052|ref|ZP_05605439.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus 68-397]
gi|257431698|ref|ZP_05608061.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
E1410]
gi|257434659|ref|ZP_05610710.1| LSU ribosomal protein L3 [Staphylococcus aureus subsp. aureus M876]
gi|257794596|ref|ZP_05643575.1| 50S ribosomal protein L3 [Staphylococcus aureus A9781]
gi|258408802|ref|ZP_05681086.1| 50S ribosomal protein L3 [Staphylococcus aureus A9763]
gi|258422401|ref|ZP_05685313.1| LSU ribosomal protein L3 [Staphylococcus aureus A9719]
gi|258422697|ref|ZP_05685602.1| LSU ribosomal protein L3 [Staphylococcus aureus A9635]
gi|258439790|ref|ZP_05690536.1| 50S ribosomal protein L3 [Staphylococcus aureus A9299]
gi|258442654|ref|ZP_05691214.1| 50S ribosomal protein L3 [Staphylococcus aureus A8115]
gi|258446647|ref|ZP_05694802.1| 50S ribosomal protein L3 [Staphylococcus aureus A6300]
gi|258450235|ref|ZP_05698327.1| 50S ribosomal protein L3 [Staphylococcus aureus A6224]
gi|258450755|ref|ZP_05698814.1| 50S ribosomal protein L3 [Staphylococcus aureus A5948]
gi|258455393|ref|ZP_05703353.1| ribosomal protein L3 [Staphylococcus aureus A5937]
gi|262048514|ref|ZP_06021398.1| 50S ribosomal protein L3 [Staphylococcus aureus D30]
gi|262052039|ref|ZP_06024250.1| 50S ribosomal protein L3 [Staphylococcus aureus 930918-3]
gi|269203883|ref|YP_003283152.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus ED98]
gi|282893688|ref|ZP_06301920.1| 50S ribosomal protein L3 [Staphylococcus aureus A8117]
gi|282902153|ref|ZP_06310046.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus C160]
gi|282906593|ref|ZP_06314441.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282909563|ref|ZP_06317374.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282911810|ref|ZP_06319606.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282915099|ref|ZP_06322876.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus M899]
gi|282917595|ref|ZP_06325347.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus D139]
gi|282920825|ref|ZP_06328543.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus C427]
gi|282922119|ref|ZP_06329815.1| 50S ribosomal protein L3 [Staphylococcus aureus A9765]
gi|282925730|ref|ZP_06333378.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus C101]
gi|282926796|ref|ZP_06334423.1| 50S ribosomal protein L3 [Staphylococcus aureus A10102]
gi|283959028|ref|ZP_06376469.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
A017934/97]
gi|284025276|ref|ZP_06379674.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus 132]
gi|293497503|ref|ZP_06665357.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
58-424]
gi|293511078|ref|ZP_06669775.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus M809]
gi|293549684|ref|ZP_06672356.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus M1015]
gi|294848783|ref|ZP_06789528.1| 50S ribosomal protein L3 [Staphylococcus aureus A9754]
gi|295404926|ref|ZP_06814739.1| 50S ribosomal protein L3 [Staphylococcus aureus A8819]
gi|295428833|ref|ZP_06821457.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296275959|ref|ZP_06858466.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus MR1]
gi|297209937|ref|ZP_06926333.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297243984|ref|ZP_06927874.1| 50S ribosomal protein L3 [Staphylococcus aureus A8796]
gi|297589681|ref|ZP_06948322.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus MN8]
gi|300910949|ref|ZP_07128399.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
TCH70]
gi|304379434|ref|ZP_07362169.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|42559569|sp|P60448|RL3_STAAM RecName: Full=50S ribosomal protein L3
gi|42559570|sp|P60449|RL3_STAAN RecName: Full=50S ribosomal protein L3
gi|42559571|sp|P60450|RL3_STAAW RecName: Full=50S ribosomal protein L3
gi|56749372|sp|Q6G771|RL3_STAAS RecName: Full=50S ribosomal protein L3
gi|56749401|sp|Q6GEI3|RL3_STAAR RecName: Full=50S ribosomal protein L3
gi|109893558|sp|Q2FEN9|RL3_STAA3 RecName: Full=50S ribosomal protein L3
gi|109893559|sp|Q2YYP6|RL3_STAAB RecName: Full=50S ribosomal protein L3
gi|123291758|sp|Q2FW06|RL3_STAA8 RecName: Full=50S ribosomal protein L3
gi|166234598|sp|A7X5G3|RL3_STAA1 RecName: Full=50S ribosomal protein L3
gi|172049048|sp|A6QJ92|RL3_STAAE RecName: Full=50S ribosomal protein L3
gi|189029483|sp|A6U3X5|RL3_STAA2 RecName: Full=50S ribosomal protein L3
gi|13702050|dbj|BAB43342.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus N315]
gi|14248023|dbj|BAB58412.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus Mu50]
gi|21205340|dbj|BAB96034.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus MW2]
gi|49242595|emb|CAG41316.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|49245475|emb|CAG43952.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|82657370|emb|CAI81811.1| 50S ribosomal protein L3 [Staphylococcus aureus RF122]
gi|87127962|gb|ABD22476.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87203720|gb|ABD31530.1| ribosomal protein L3, putative [Staphylococcus aureus subsp. aureus
NCTC 8325]
gi|149947207|gb|ABR53143.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus JH1]
gi|150375164|dbj|BAF68424.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156722700|dbj|BAF79117.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus Mu3]
gi|253726363|gb|EES95092.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253727658|gb|EES96387.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
TCH130]
gi|257272753|gb|EEV04855.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
55/2053]
gi|257276044|gb|EEV07495.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
65-1322]
gi|257279533|gb|EEV10120.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus 68-397]
gi|257282577|gb|EEV12709.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
E1410]
gi|257285255|gb|EEV15371.1| LSU ribosomal protein L3 [Staphylococcus aureus subsp. aureus M876]
gi|257788568|gb|EEV26908.1| 50S ribosomal protein L3 [Staphylococcus aureus A9781]
gi|257840485|gb|EEV64945.1| 50S ribosomal protein L3 [Staphylococcus aureus A9763]
gi|257841832|gb|EEV66269.1| LSU ribosomal protein L3 [Staphylococcus aureus A9719]
gi|257847108|gb|EEV71117.1| LSU ribosomal protein L3 [Staphylococcus aureus A9635]
gi|257847566|gb|EEV71568.1| 50S ribosomal protein L3 [Staphylococcus aureus A9299]
gi|257851775|gb|EEV75709.1| 50S ribosomal protein L3 [Staphylococcus aureus A8115]
gi|257854715|gb|EEV77663.1| 50S ribosomal protein L3 [Staphylococcus aureus A6300]
gi|257856327|gb|EEV79236.1| 50S ribosomal protein L3 [Staphylococcus aureus A6224]
gi|257861538|gb|EEV84340.1| 50S ribosomal protein L3 [Staphylococcus aureus A5948]
gi|257862604|gb|EEV85372.1| ribosomal protein L3 [Staphylococcus aureus A5937]
gi|259160094|gb|EEW45127.1| 50S ribosomal protein L3 [Staphylococcus aureus 930918-3]
gi|259163372|gb|EEW47930.1| 50S ribosomal protein L3 [Staphylococcus aureus D30]
gi|262076173|gb|ACY12146.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus ED98]
gi|269941839|emb|CBI50249.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus TW20]
gi|282312559|gb|EFB42963.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus C101]
gi|282315240|gb|EFB45624.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus C427]
gi|282318557|gb|EFB48915.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus D139]
gi|282320820|gb|EFB51154.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus M899]
gi|282323506|gb|EFB53822.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282326542|gb|EFB56844.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282329492|gb|EFB59013.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282591247|gb|EFB96320.1| 50S ribosomal protein L3 [Staphylococcus aureus A10102]
gi|282593587|gb|EFB98580.1| 50S ribosomal protein L3 [Staphylococcus aureus A9765]
gi|282596612|gb|EFC01571.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus C160]
gi|282763746|gb|EFC03874.1| 50S ribosomal protein L3 [Staphylococcus aureus A8117]
gi|283471472|emb|CAQ50683.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus ST398]
gi|283788620|gb|EFC27447.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
A017934/97]
gi|285817912|gb|ADC38399.1| 50S ribosomal protein L3 [Staphylococcus aureus 04-02981]
gi|290918731|gb|EFD95807.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus M1015]
gi|291096434|gb|EFE26692.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
58-424]
gi|291466065|gb|EFF08594.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus M809]
gi|294824162|gb|EFG40586.1| 50S ribosomal protein L3 [Staphylococcus aureus A9754]
gi|294969871|gb|EFG45889.1| 50S ribosomal protein L3 [Staphylococcus aureus A8819]
gi|295127182|gb|EFG56824.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|296885610|gb|EFH24547.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297178762|gb|EFH38007.1| 50S ribosomal protein L3 [Staphylococcus aureus A8796]
gi|297578192|gb|EFH96905.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus MN8]
gi|298695506|gb|ADI98728.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
ED133]
gi|300887929|gb|EFK83124.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
TCH70]
gi|302333886|gb|ADL24079.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
JKD6159]
gi|302752123|gb|ADL66300.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus str.
JKD6008]
gi|304341966|gb|EFM07870.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|312437339|gb|ADQ76410.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
TCH60]
gi|312830599|emb|CBX35441.1| 50S ribosomal protein L3 (BL3) [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|315129670|gb|EFT85661.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
CGS03]
gi|315193502|gb|EFU23898.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
CGS00]
gi|315198220|gb|EFU28551.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
CGS01]
gi|320140212|gb|EFW32071.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320143482|gb|EFW35263.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
MRSA177]
gi|329723366|gb|EGG59895.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
21172]
gi|329730333|gb|EGG66723.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
21193]
gi|329732084|gb|EGG68439.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
21189]
Length = 220
Score = 201 bits (511), Expect = 6e-50, Method: Composition-based stats.
Identities = 94/223 (42%), Positives = 123/223 (55%), Gaps = 11/223 (4%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG------ 54
M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY A+QVG
Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEAKENVVLQKKTVEVDGYNAIQVGFEDKKAYK 60
Query: 55 --EAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
K +KP G + +PK+ + EFR D VG S F G ++DVT
Sbjct: 61 KDAKSNKYANKPAEGHAKKADAAPKRFIREFRNVDVDA-YEVGQEVSVDTFVAGDVIDVT 119
Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
G++ GKGF GA+KRH +HG S HR+ GS G D RVFK +KM GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHGQSRGPMSHG-SHFHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178
Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
TV+NLEVV VD + +ILVKG VPG KK + +R S K
Sbjct: 179 TVQNLEVVQVDTENKVILVKGNVPGPKKG-LVEIRTSIKKGNK 220
>gi|170017943|ref|YP_001728862.1| ribosomal protein L3 [Leuconostoc citreum KM20]
gi|226730530|sp|B1MW14|RL3_LEUCK RecName: Full=50S ribosomal protein L3
gi|169804800|gb|ACA83418.1| Ribosomal protein L3 [Leuconostoc citreum KM20]
Length = 227
Score = 201 bits (511), Expect = 6e-50, Method: Composition-based stats.
Identities = 79/219 (36%), Positives = 115/219 (52%), Gaps = 8/219 (3%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ G I VT + V+ + + +GY A+Q+G + +
Sbjct: 1 MTKGILGRKVGMTQVFTESGELIAVTAVEATPNVVLQVKNIATDGYNAIQLGYQDKRTVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G S N +PK+ + E V+ + G F G VDVTG+T G GF
Sbjct: 61 SNKPEQGHASKANTTPKRYVRE--VRDAEGEFNAGDEIKVDTFQAGDYVDVTGITKGHGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+K+ HG S HR GS G RVFK K + GRMG N+ T++N+ +V
Sbjct: 119 QGAIKKLGQSRGPMAHG-SRYHRRPGSMGAI--INRVFKGKLLPGRMGNNKRTMQNVAIV 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
VD + L+L+KG VPGA K S + ++ + K VN K
Sbjct: 176 HVDVENNLLLLKGNVPGANK-SLLTIKSTVK--VNAKHP 211
>gi|52840574|ref|YP_094373.1| 50S ribosomal protein L3 [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|54296365|ref|YP_122734.1| 50S ribosomal protein L3 [Legionella pneumophila str. Paris]
gi|148361053|ref|YP_001252260.1| 50S ribosomal protein L3 [Legionella pneumophila str. Corby]
gi|81822648|sp|Q5X859|RL3_LEGPA RecName: Full=50S ribosomal protein L3
gi|81823474|sp|Q5ZYP3|RL3_LEGPH RecName: Full=50S ribosomal protein L3
gi|166233152|sp|A5IHR4|RL3_LEGPC RecName: Full=50S ribosomal protein L3
gi|52627685|gb|AAU26426.1| 50S ribosomal protein L3 [Legionella pneumophila subsp. pneumophila
str. Philadelphia 1]
gi|53750150|emb|CAH11542.1| 50S ribosomal subunit protein L3 [Legionella pneumophila str.
Paris]
gi|148282826|gb|ABQ56914.1| 50S ribosomal protein L3 [Legionella pneumophila str. Corby]
Length = 216
Score = 201 bits (511), Expect = 6e-50, Method: Composition-based stats.
Identities = 93/212 (43%), Positives = 128/212 (60%), Gaps = 1/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ EG +PV+V+ + +V +T +GY AVQ+ G K
Sbjct: 1 MMIGLLGRKIGMTRVFTPEGVSVPVSVVEVQPNRVSQVKTAANDGYSAVQLTGGTKKSSK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VSKP+ G F+ + EFR+ +D P + FT GQ VDV+G+T GKGF
Sbjct: 61 VSKPVAGHFAKAQIDAGDMQVEFRIDSEDAFTPGQVISVADVFTAGQYVDVSGLTKGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KRHNF A+HG S SHR GS G Q PGRVFK KKMAG MG R T+++LE+V
Sbjct: 121 AGTVKRHNFRTQDASHGNSRSHRVPGSIGQNQTPGRVFKGKKMAGHMGNARCTIQSLELV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG +PGA S + ++ + K
Sbjct: 181 KVDSERNLLLIKGAIPGAP-GSRVEIKPAVKK 211
>gi|223042682|ref|ZP_03612731.1| 50S ribosomal protein L3 [Staphylococcus capitis SK14]
gi|222444345|gb|EEE50441.1| 50S ribosomal protein L3 [Staphylococcus capitis SK14]
Length = 220
Score = 201 bits (511), Expect = 7e-50, Method: Composition-based stats.
Identities = 94/223 (42%), Positives = 121/223 (54%), Gaps = 11/223 (4%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA------- 53
M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+QVG
Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60
Query: 54 -GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
G K +KP G + +PK+ + EFR D+ VG S F G ++DVT
Sbjct: 61 KGSKSNKYANKPAEGHAKKADTTPKRFIREFRNVNVDE-YEVGQEVSVDTFETGDIIDVT 119
Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
G++ GKGF GA+KRH HG S HR+ GS G D RVFK +KM GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHGQARGPMGHG-SHFHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178
Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
TV+NLEVV VD +ILVKG VPG KK + + S K
Sbjct: 179 TVQNLEVVQVDTDNSVILVKGNVPGPKKG-LVEITTSIKKGNK 220
>gi|145517081|ref|XP_001444429.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124411840|emb|CAK77032.1| unnamed protein product [Paramecium tetraurelia]
Length = 409
Score = 201 bits (511), Expect = 7e-50, Method: Composition-based stats.
Identities = 96/220 (43%), Positives = 138/220 (62%), Gaps = 4/220 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+G++A K+GMT ++ G R +TVL LDN QVV + + Y +Q+GAG +K +
Sbjct: 150 RAGLIAVKVGMTAQWDKWGYRHALTVLQLDNNQVVQV--VKNDTYTGLQIGAGRVNIKTL 207
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
KP G F N+ PKK + EF + ++ LPVG + + +FT GQ +D+ G++ GKGF
Sbjct: 208 KKPQIGHFLKANIPPKKYIKEFPITP-ENTLPVGFMLTARHFTPGQYIDIQGISTGKGFG 266
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRHNF ATHG S+ HR GSTG RQDPGRVFK KKM G +G ++VT + +++
Sbjct: 267 GTVKRHNFKTQPATHGNSLCHRQLGSTGQRQDPGRVFKGKKMPGHLGNDKVTCEGIQIYR 326
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
+D R LI +KG VPG S + +RDS+K+ K ++
Sbjct: 327 IDAVRQLIYIKGSVPGKP-GSIVYLRDSWKAQKKNKELLN 365
>gi|322386354|ref|ZP_08059984.1| 50S ribosomal protein L3 [Streptococcus cristatus ATCC 51100]
gi|321269578|gb|EFX52508.1| 50S ribosomal protein L3 [Streptococcus cristatus ATCC 51100]
Length = 208
Score = 201 bits (511), Expect = 7e-50, Method: Composition-based stats.
Identities = 89/214 (41%), Positives = 129/214 (60%), Gaps = 6/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + +
Sbjct: 1 MTKGILGKKVGMTQIFTEAGELIPVTVVEAAPNVVLQVKTVETDGYNAVQVGFDDLRDVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EF+ + L VG+ + F G +VDVTG + GKGF
Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFKNIEG---LEVGAEITVDTFEAGDVVDVTGTSKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIV 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V ++ +IL+KG VPGAKK S + ++ + K+
Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLVTIKSAVKAGK 208
>gi|319900924|ref|YP_004160652.1| LSU ribosomal protein L3P [Bacteroides helcogenes P 36-108]
gi|319415955|gb|ADV43066.1| LSU ribosomal protein L3P [Bacteroides helcogenes P 36-108]
Length = 205
Score = 201 bits (511), Expect = 7e-50, Method: Composition-based stats.
Identities = 83/204 (40%), Positives = 124/204 (60%), Gaps = 4/204 (1%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT V++ EG+ +P TV+ C V +T++K+GY AVQ+G + K K+ +K
Sbjct: 3 GLLGKKIGMTSVFSAEGKNVPCTVIEAGPCVVTQVKTVEKDGYKAVQLGFQDKKEKHTTK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P+ G F V+PKK L EF ++ + L +G + F VDV G + GKGF G
Sbjct: 63 PLMGHFKKAGVTPKKHLAEF--KEFETELNLGDTVTVELFNDATFVDVVGTSKGKGFQGV 120
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G + THG R GS G P +VFK +M G++GG+RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180
Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
+ L+L+KG VPG K S +++
Sbjct: 181 IAEHNLLLIKGSVPGC-KGSIVII 203
>gi|325689231|gb|EGD31237.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK115]
Length = 208
Score = 201 bits (511), Expect = 7e-50, Method: Composition-based stats.
Identities = 90/214 (42%), Positives = 130/214 (60%), Gaps = 6/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + +
Sbjct: 1 MTKGILGKKVGMTQIFTEAGELIPVTVIEAAPNVVLQVKTVETDGYNAVQVGFDDLRDVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EF+ + L VG+ + F G +VDVTG + GKGF
Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFKNIEG---LEVGAEITVDTFEAGDVVDVTGTSKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFKNK++AGRMGGNRVT++NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTIQNLEIV 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V ++ +IL+KG VPGAKK S I ++ + K+
Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKAGK 208
>gi|217967369|ref|YP_002352875.1| ribosomal protein L3 [Dictyoglomus turgidum DSM 6724]
gi|217336468|gb|ACK42261.1| ribosomal protein L3 [Dictyoglomus turgidum DSM 6724]
Length = 215
Score = 201 bits (511), Expect = 7e-50, Method: Composition-based stats.
Identities = 76/211 (36%), Positives = 112/211 (53%), Gaps = 4/211 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
++ RK+GMT ++ G +PVTV+ C V+ RT +K+GY A+Q+G K +
Sbjct: 6 TKAILGRKIGMTQIFTENGEMVPVTVIRGGPCLVLNVRTKEKDGYDAIQLGFERCKESKL 65
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F + + P + + E RV+ D G F G+ VD+TG + G GF+
Sbjct: 66 NKPQLGIFKKLGLPPFRIIKEVRVKNPLD-YTKGQEIRVDIFQEGEFVDITGKSKGHGFT 124
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF R +HG R V K +KMAGR G +TV+NL++V
Sbjct: 125 GHIKRWNFSRGRMSHGSKFHRRRASIGA--GGVQHVMKGQKMAGRWGNETITVQNLKIVK 182
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD ++ LILVKG VPG N +++R + K
Sbjct: 183 VDKEKDLILVKGAVPGPTGN-LLIIRKAVKK 212
>gi|309389933|gb|ADO77813.1| LSU ribosomal protein L3P [Halanaerobium praevalens DSM 2228]
Length = 206
Score = 200 bits (510), Expect = 7e-50, Method: Composition-based stats.
Identities = 92/212 (43%), Positives = 128/212 (60%), Gaps = 6/212 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M ++ +KLGMT + G +PVTV+ C V +T +K+GY +VQ+G GE K
Sbjct: 1 MAKAILGKKLGMTQYFKDNGELVPVTVVEAGPCVVTQIKTTEKDGYNSVQLGFGEVKKHR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP G F S N+ PKK L EF + D L GS F VG+ +DV+G++ GKGF
Sbjct: 61 LNKPELGQFESRNLEPKKHLREF--KGLDMELSEGSEIKADIFEVGEKIDVSGISKGKGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR N THG S HR+ GS G D RV+K KM GRMG +RVT +NLE+V
Sbjct: 119 AGNIKRWNHHRGPMTHG-SHFHRAPGSIGAV-DARRVYKGFKMPGRMGHDRVTERNLEIV 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R ++L+ G VPGAKK + + ++ S K+
Sbjct: 177 KVDLERNVLLIAGPVPGAKK-AVLEIK-SVKN 206
>gi|27468742|ref|NP_765379.1| 50S ribosomal protein L3 [Staphylococcus epidermidis ATCC 12228]
gi|42559629|sp|Q8CRG0|RL3_STAES RecName: Full=50S ribosomal protein L3
gi|27316290|gb|AAO05465.1|AE016750_70 50S ribosomal protein L3 [Staphylococcus epidermidis ATCC 12228]
Length = 220
Score = 200 bits (510), Expect = 7e-50, Method: Composition-based stats.
Identities = 93/223 (41%), Positives = 123/223 (55%), Gaps = 11/223 (4%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA------- 53
M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+QVG
Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60
Query: 54 -GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
G K +KP G + +PK+ + EFR D+ +G S F G ++DVT
Sbjct: 61 KGSKSNKYANKPAEGHAKKADTAPKRFIREFRNVNVDE-YELGQEVSVDTFETGDIIDVT 119
Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
G++ GKGF GA+KRH G HG S HR+ GS G D +VFK +KM GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHGQGRGPMAHG-SHFHRAPGSVGMASDASKVFKGQKMPGRMGGNTV 178
Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
TV+NLEVV VD + +ILVKG VPG KK + + S K
Sbjct: 179 TVQNLEVVQVDTENSVILVKGNVPGPKKG-LVEITTSIKKGNK 220
>gi|327402783|ref|YP_004343621.1| 50S ribosomal protein L3P [Fluviicola taffensis DSM 16823]
gi|327318291|gb|AEA42783.1| LSU ribosomal protein L3P [Fluviicola taffensis DSM 16823]
Length = 204
Score = 200 bits (510), Expect = 7e-50, Method: Composition-based stats.
Identities = 89/206 (43%), Positives = 124/206 (60%), Gaps = 5/206 (2%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT VY+ EG+ P TV+ C V +T D++GY A+Q+G GE + KN
Sbjct: 3 GIIGKKIGMTSVYSAEGKATPCTVIEAGPCVVTQVKTQDRDGYEAIQLGFGERREKNTPN 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
++G F N +PK KL EF K D L +G V F G+ V + G + GKGF G
Sbjct: 63 ALKGHFKKANTTPKSKLVEF---KGFDGLNLGDVVDVQLFEQGEFVGIAGTSKGKGFQGV 119
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRHNF G ++THG R+ GS G P RVFK +MAG+MG RVTV+NLEV+ V
Sbjct: 120 VKRHNFGGVGQSTHGQHNRLRAPGSIGACSYPARVFKGMRMAGQMGNKRVTVENLEVLRV 179
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRD 208
+ LI+VKG +PG K S ++++
Sbjct: 180 LADKNLIVVKGSIPGP-KGSTVIIQK 204
>gi|84515208|ref|ZP_01002571.1| 50S ribosomal protein L3 [Loktanella vestfoldensis SKA53]
gi|84511367|gb|EAQ07821.1| 50S ribosomal protein L3 [Loktanella vestfoldensis SKA53]
Length = 272
Score = 200 bits (510), Expect = 7e-50, Method: Composition-based stats.
Identities = 115/204 (56%), Positives = 154/204 (75%), Gaps = 2/204 (0%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
MT ++ +GR++PVTVL L+N QVV RT++K+GY+AVQ+GAG AK K S+ MRG F++
Sbjct: 1 MTRLFMEDGRQVPVTVLALENLQVVAQRTVEKDGYVAVQLGAGAAKAKRTSQAMRGHFAA 60
Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
V PK+K+ EFRV ++++ VG + +++ GQ VDV+G +IGKGF+GAMKRHNFGG
Sbjct: 61 AKVEPKRKVAEFRVAP-ENMINVGETITANHYFEGQYVDVSGTSIGKGFAGAMKRHNFGG 119
Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
LRA+HGVS+SHRSHGSTG QDPG+VFK KKMAG MG RVT +NL+VV D RGLI+V
Sbjct: 120 LRASHGVSVSHRSHGSTGQCQDPGKVFKGKKMAGHMGSARVTTQNLQVVRTDADRGLIMV 179
Query: 192 KGCVPGAKKNSWILVRDSFKSAVN 215
KG VPG+ + W+ ++D+ K
Sbjct: 180 KGAVPGS-RGGWVTLKDAVKKPTP 202
>gi|328851231|gb|EGG00388.1| hypothetical protein MELLADRAFT_73188 [Melampsora larici-populina
98AG31]
Length = 336
Score = 200 bits (510), Expect = 8e-50, Method: Composition-based stats.
Identities = 94/212 (44%), Positives = 132/212 (62%), Gaps = 2/212 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV-KN 60
R+GV+ARK GMT ++ +G R+PVTVL L++ QV+ H+ ++ Y AVQVG N
Sbjct: 65 RTGVIARKRGMTSFWDADGVRVPVTVLELEDVQVIGHKYHARDSYCAVQVGCSNRNTRNN 124
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++ R +F V+PK ++ EF+V + L+PVG+ S ++F GQ VDV + GKGF
Sbjct: 125 LNSSQRKWFEHAGVNPKHRVAEFQVTDETSLVPVGTEISSAHFVPGQFVDVKANSKGKGF 184
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR F G A+HG + HR GSTG QDPGRV+ KKMAGRMG +TV+NL V
Sbjct: 185 AGVMKRWGFSGGNASHGSTKHHRKAGSTGQHQDPGRVWPGKKMAGRMGNQPITVRNLLVA 244
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+D ++ VKG VPG K ++ + D+ K
Sbjct: 245 RIDTALNVVYVKGQVPGPTKG-YVKISDAEKG 275
>gi|116334269|ref|YP_795796.1| 50S ribosomal protein L3 [Lactobacillus brevis ATCC 367]
gi|122269049|sp|Q03PV7|RL3_LACBA RecName: Full=50S ribosomal protein L3
gi|116099616|gb|ABJ64765.1| LSU ribosomal protein L3P [Lactobacillus brevis ATCC 367]
Length = 216
Score = 200 bits (510), Expect = 8e-50, Method: Composition-based stats.
Identities = 72/218 (33%), Positives = 114/218 (52%), Gaps = 5/218 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT V+ G IPVTV+ V+ +T++ +GY A+Q+G + +
Sbjct: 3 TKGILGKKVGMTQVFTDAGELIPVTVVEATPNVVLQVKTMENDGYNAIQLGYQDKREVLS 62
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP +G + N +PK+ + EF + D V F G +VDVTG+T G G+
Sbjct: 63 NKPEQGHVAKANTTPKRFIREFTDVELGD-YKVADEVKVDTFQAGDIVDVTGVTKGHGYQ 121
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G + + HG S HR GS G RVF K+ GRMG +VT++NL +V
Sbjct: 122 GNIHKDGQSRGPMAHG-SRYHRRPGSLGAI--INRVFPGMKLPGRMGNKQVTIQNLVIVK 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
D + ++L+KG VPGA K S + V+ + + + +
Sbjct: 179 ADVENNVLLIKGNVPGANK-SLVTVKSAVRPPRPKQSE 215
>gi|262038282|ref|ZP_06011672.1| 50S ribosomal protein L3 [Leptotrichia goodfellowii F0264]
gi|261747749|gb|EEY35198.1| 50S ribosomal protein L3 [Leptotrichia goodfellowii F0264]
Length = 208
Score = 200 bits (510), Expect = 8e-50, Method: Composition-based stats.
Identities = 89/209 (42%), Positives = 124/209 (59%), Gaps = 4/209 (1%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ +K+GMT ++ + IPVTV+ VV ++ +K+GY AV + + K KN KP
Sbjct: 2 ILGKKIGMTQIF-ENEKLIPVTVIEAGPNFVVQKKSEEKDGYNAVTLAYDDKKEKNTIKP 60
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
G F +SPKK L EF+V + + +G F + VD+ G + GKG +G M
Sbjct: 61 EMGIFKKAGISPKKFLKEFKVAELES-FELGQEFKVDVLEGIEFVDIVGTSKGKGTAGVM 119
Query: 125 KRHNFGGLRATHGVSISHRSHGS-TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
KRHNFGG RATHGVS +HR GS G V K KKMAGR+G +VTV+NL+VV D
Sbjct: 120 KRHNFGGNRATHGVSRNHRLGGSNAGGAASNSNVPKGKKMAGRLGNEQVTVQNLKVVKFD 179
Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+ L+LVKG VPG KN +++++ S K
Sbjct: 180 AENNLLLVKGAVPGP-KNGYLVIKKSVKK 207
>gi|224005591|ref|XP_002291756.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972275|gb|EED90607.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 232
Score = 200 bits (510), Expect = 8e-50, Method: Composition-based stats.
Identities = 110/214 (51%), Positives = 137/214 (64%), Gaps = 4/214 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAVQVGAGEAKVKN 60
R G + KLGM +++ G R P TVL+LDN VV ++ D +GY AVQ+GAGE K KN
Sbjct: 20 RCGALGIKLGMMPLWDKWGERHPCTVLYLDNNVVVRTKSKDSVDGYDAVQIGAGERKAKN 79
Query: 61 VSKPMRGFFSS--VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
V+KP+ ++ VN +P + EFRV D + P GS +F GQ VD+ G + GK
Sbjct: 80 VNKPLMCHYAKFGVNENPPYVVREFRVTTPDAMPPPGSKIHARHFVPGQNVDIAGTSKGK 139
Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
GF G MKRH F G+ ATHG S SHR+ GSTG QDPGRVFK KKM GRMGG RVT +NL
Sbjct: 140 GFQGGMKRHGFKGMPATHGTSKSHRAIGSTGQCQDPGRVFKGKKMPGRMGGVRVTKQNLR 199
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VV +D R LI VKG VPG K ++ +RD+ K
Sbjct: 200 VVKIDRGRNLIYVKGAVPG-NKGEFVEIRDAVKK 232
>gi|218885187|ref|YP_002434508.1| 50S ribosomal protein L3 [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|226725164|sp|B8DN96|RL3_DESVM RecName: Full=50S ribosomal protein L3
gi|218756141|gb|ACL07040.1| ribosomal protein L3 [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 209
Score = 200 bits (510), Expect = 8e-50, Method: Composition-based stats.
Identities = 92/207 (44%), Positives = 123/207 (59%), Gaps = 2/207 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
+ G++ RK+GMT ++ +G + VTV+ C V+ R + +GY AVQ+ EAK K+V
Sbjct: 4 KLGILGRKVGMTRIFASDGSAVAVTVIQAGPCPVIQVRNGETDGYDAVQIAFEEAKEKHV 63
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP RG F+ + L E R++ + VG + S F G+ V VTG +IGKG+
Sbjct: 64 TKPARGHFAKAGKGLFRNLREIRLEAPAE-FEVGQELTVSLFAAGEKVKVTGTSIGKGYQ 122
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G M+R NF G + THG HRS GS G PG VFK KKMAG G RVTVKNLE+V
Sbjct: 123 GVMRRWNFAGSKDTHGCEKVHRSGGSIGNNTFPGHVFKGKKMAGHWGDERVTVKNLEIVD 182
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRD 208
+ + +ILVKG VPG KN +LVR
Sbjct: 183 IRAEDNVILVKGAVPGP-KNGLVLVRK 208
>gi|259500892|ref|ZP_05743794.1| 50S ribosomal protein L3 [Lactobacillus iners DSM 13335]
gi|302190655|ref|ZP_07266909.1| 50S ribosomal protein L3 [Lactobacillus iners AB-1]
gi|309803703|ref|ZP_07697793.1| 50S ribosomal protein L3 [Lactobacillus iners LactinV 11V1-d]
gi|309804974|ref|ZP_07699032.1| 50S ribosomal protein L3 [Lactobacillus iners LactinV 09V1-c]
gi|309806693|ref|ZP_07700688.1| 50S ribosomal protein L3 [Lactobacillus iners LactinV 03V1-b]
gi|309808420|ref|ZP_07702319.1| 50S ribosomal protein L3 [Lactobacillus iners LactinV 01V1-a]
gi|309809118|ref|ZP_07702991.1| 50S ribosomal protein L3 [Lactobacillus iners SPIN 2503V10-D]
gi|312871230|ref|ZP_07731328.1| 50S ribosomal protein L3 [Lactobacillus iners LEAF 3008A-a]
gi|312872706|ref|ZP_07732771.1| 50S ribosomal protein L3 [Lactobacillus iners LEAF 2062A-h1]
gi|312874007|ref|ZP_07734042.1| 50S ribosomal protein L3 [Lactobacillus iners LEAF 2052A-d]
gi|312874981|ref|ZP_07735000.1| 50S ribosomal protein L3 [Lactobacillus iners LEAF 2053A-b]
gi|315654026|ref|ZP_07906942.1| 50S ribosomal protein L3 [Lactobacillus iners ATCC 55195]
gi|325912351|ref|ZP_08174747.1| 50S ribosomal protein L3 [Lactobacillus iners UPII 143-D]
gi|325913214|ref|ZP_08175583.1| 50S ribosomal protein L3 [Lactobacillus iners UPII 60-B]
gi|329920622|ref|ZP_08277309.1| 50S ribosomal protein L3 [Lactobacillus iners SPIN 1401G]
gi|259167586|gb|EEW52081.1| 50S ribosomal protein L3 [Lactobacillus iners DSM 13335]
gi|308164301|gb|EFO66558.1| 50S ribosomal protein L3 [Lactobacillus iners LactinV 11V1-d]
gi|308165734|gb|EFO67959.1| 50S ribosomal protein L3 [Lactobacillus iners LactinV 09V1-c]
gi|308166873|gb|EFO69057.1| 50S ribosomal protein L3 [Lactobacillus iners LactinV 03V1-b]
gi|308168248|gb|EFO70367.1| 50S ribosomal protein L3 [Lactobacillus iners LactinV 01V1-a]
gi|308170563|gb|EFO72583.1| 50S ribosomal protein L3 [Lactobacillus iners SPIN 2503V10-D]
gi|311089726|gb|EFQ48151.1| 50S ribosomal protein L3 [Lactobacillus iners LEAF 2053A-b]
gi|311090347|gb|EFQ48756.1| 50S ribosomal protein L3 [Lactobacillus iners LEAF 2052A-d]
gi|311091748|gb|EFQ50127.1| 50S ribosomal protein L3 [Lactobacillus iners LEAF 2062A-h1]
gi|311093244|gb|EFQ51590.1| 50S ribosomal protein L3 [Lactobacillus iners LEAF 3008A-a]
gi|315488722|gb|EFU78368.1| 50S ribosomal protein L3 [Lactobacillus iners ATCC 55195]
gi|325475822|gb|EGC78992.1| 50S ribosomal protein L3 [Lactobacillus iners UPII 143-D]
gi|325477478|gb|EGC80621.1| 50S ribosomal protein L3 [Lactobacillus iners UPII 60-B]
gi|328935880|gb|EGG32340.1| 50S ribosomal protein L3 [Lactobacillus iners SPIN 1401G]
Length = 209
Score = 200 bits (510), Expect = 8e-50, Method: Composition-based stats.
Identities = 82/214 (38%), Positives = 120/214 (56%), Gaps = 5/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V++ G +PVTV+ V+ +T + +GY AVQVG + +
Sbjct: 1 MTKGILGRKVGMTQVFSKNGILVPVTVIEATPNVVLQVKTNESDGYEAVQVGYQDVREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + +PK+ + E R + + VGS F+ G +VDVTG + G G
Sbjct: 61 SNKPAKGHAAKAKTAPKRFIREIRDVELEG-YEVGSEIKVDTFSEGDVVDVTGTSKGHGT 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR THG S HR GS G RV K KK+ G MGG +VTV+NL +
Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSI--INRVPKGKKLPGHMGGKQVTVQNLVIE 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V ++ ++L+KG VPGA KNS I+V+ + K+A
Sbjct: 177 KVVPEKNVLLIKGNVPGA-KNSLIIVKSAVKAAK 209
>gi|254456207|ref|ZP_05069636.1| ribosomal protein L3 [Candidatus Pelagibacter sp. HTCC7211]
gi|207083209|gb|EDZ60635.1| ribosomal protein L3 [Candidatus Pelagibacter sp. HTCC7211]
Length = 236
Score = 200 bits (510), Expect = 9e-50, Method: Composition-based stats.
Identities = 100/210 (47%), Positives = 138/210 (65%), Gaps = 2/210 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
++ +K+GMT + G+ +PVTVL ++ +VV +K GY AVQ+G G+ K ++
Sbjct: 4 IALMGKKIGMTREFYKTGQLVPVTVLKVEKARVVQVIDEEKRGYKAVQLGYGKIKNSKLT 63
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
K M+GFF+ N K+KL E+R+ KD + G+ F F + VD TIGKGF+G
Sbjct: 64 KAMKGFFAKKNTEAKRKLKEYRI-KDTEAYKEGNEFGLEIFKDIKFVDTRSKTIGKGFAG 122
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
AMKR NFGGLRA+HGVSISHR+HGSTG QDPG+VFK KKMAG MG T+ N+E+V
Sbjct: 123 AMKRWNFGGLRASHGVSISHRAHGSTGHSQDPGKVFKGKKMAGHMGDRLRTMLNIEIVKT 182
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
D + L+ +KG +PG+ KN+ + VR S K+
Sbjct: 183 DLENELLYLKGSIPGS-KNTEVFVRKSVKN 211
>gi|189465418|ref|ZP_03014203.1| hypothetical protein BACINT_01771 [Bacteroides intestinalis DSM
17393]
gi|189437692|gb|EDV06677.1| hypothetical protein BACINT_01771 [Bacteroides intestinalis DSM
17393]
Length = 205
Score = 200 bits (510), Expect = 9e-50, Method: Composition-based stats.
Identities = 82/204 (40%), Positives = 123/204 (60%), Gaps = 4/204 (1%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT V++ EG+ +P TV+ C V ++++K+GY AVQ+G + K K+ +K
Sbjct: 3 GLLGKKIGMTSVFSAEGKNVPCTVIEAGPCVVTQVKSVEKDGYAAVQLGFQDKKEKHTTK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P+ G F V+PKK L EF ++ + L +G + F VDV G + GKGF G
Sbjct: 63 PLMGHFKKAGVTPKKHLAEF--KEFETELNLGDTVTVELFNDATFVDVIGTSKGKGFQGV 120
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G + THG R GS G P +VFK +M G++GG+RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKV 180
Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
L+L+KG VPG K S +++
Sbjct: 181 LPDHNLLLIKGSVPGC-KGSIVII 203
>gi|167755912|ref|ZP_02428039.1| hypothetical protein CLORAM_01432 [Clostridium ramosum DSM 1402]
gi|167703904|gb|EDS18483.1| hypothetical protein CLORAM_01432 [Clostridium ramosum DSM 1402]
Length = 242
Score = 200 bits (510), Expect = 9e-50, Method: Composition-based stats.
Identities = 83/214 (38%), Positives = 120/214 (56%), Gaps = 4/214 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT V+ +G IPVTV+ D V+ +T+ +GY A+QVG + + K
Sbjct: 1 MKGILGRKIGMTQVFTTDGLLIPVTVVEADANVVLQKKTVATDGYDAIQVGFEDKREKLA 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+K G N +PK+ + EFR + VG + F G++VDVTG + GKG+
Sbjct: 61 NKAELGIVKKANTAPKRFIKEFRYDEM-MSYEVGDKITVDSFVAGEVVDVTGTSKGKGYQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRH HG S +HR GS G P R+ KK+ G+MG TV+NLEVV+
Sbjct: 120 GVIKRHGQRIGPKGHG-SGAHRIVGSMGPIA-PNRIAPGKKLPGQMGHVTRTVQNLEVVA 177
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
VD + L+L+KG VPG KK ++V+ K+A
Sbjct: 178 VDVENNLLLIKGSVPGPKKG-LVIVKSGIKAAGK 210
>gi|283767342|ref|ZP_06340257.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus H19]
gi|283461221|gb|EFC08305.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus H19]
Length = 220
Score = 200 bits (510), Expect = 9e-50, Method: Composition-based stats.
Identities = 94/223 (42%), Positives = 123/223 (55%), Gaps = 11/223 (4%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG------ 54
M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY A+QVG
Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEAKENLVLQKKTVEVDGYNAIQVGFEDKKAYK 60
Query: 55 --EAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
K +KP G + +PK+ + EFR D VG S F G ++DVT
Sbjct: 61 KDAKSNKYANKPAEGHAKKADAAPKRFIREFRNVDVDA-YEVGQEVSVDTFVAGDVIDVT 119
Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
G++ GKGF GA+KRH +HG S HR+ GS G D RVFK +KM GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHGQSRGPMSHG-SHFHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178
Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
TV+NLEVV VD + +ILVKG VPG KK + +R S K
Sbjct: 179 TVQNLEVVQVDTENKVILVKGNVPGPKKG-LVEIRTSIKKGNK 220
>gi|221194518|ref|ZP_03567575.1| 50S ribosomal protein L3 [Atopobium rimae ATCC 49626]
gi|221185422|gb|EEE17812.1| 50S ribosomal protein L3 [Atopobium rimae ATCC 49626]
Length = 206
Score = 200 bits (510), Expect = 9e-50, Method: Composition-based stats.
Identities = 87/209 (41%), Positives = 119/209 (56%), Gaps = 3/209 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M + ++ RKLGMT V++ +PVTV+ C V +T + +GY AVQ+G G+ K+
Sbjct: 1 MVNTILGRKLGMTQVWDENDNVVPVTVILAGPCTVSQVKTAETDGYDAVQIGFGDISEKH 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KPM G F + V P + L E RV + G + + F+ VDV G + GKGF
Sbjct: 61 VNKPMAGHFKAQGVEPMRYLREVRV-PAGEEHKCGDTVTVADFSEVTAVDVIGTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR NF THG S + R GS G P RV K M G MG RVTVKNL++V
Sbjct: 120 QGTIKRWNFSRGPMTHG-SRNQRRPGSIGQCAYPARVRKGLHMYGHMGAERVTVKNLKLV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
VD ++ L+L+KG VPG KN+ + VR +
Sbjct: 179 RVDAEQNLMLIKGAVPGG-KNALVQVRMA 206
>gi|50285271|ref|XP_445064.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524367|emb|CAG57964.1| unnamed protein product [Candida glabrata]
Length = 263
Score = 200 bits (509), Expect = 9e-50, Method: Composition-based stats.
Identities = 100/212 (47%), Positives = 144/212 (67%), Gaps = 2/212 (0%)
Query: 2 RSGVVARKLGMTCVYNI-EGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
R G V +K+GM ++ G RI T+L +N +V++HR LD++GY+A QVG G V
Sbjct: 50 RCGAVTQKVGMMPYFDEKTGERIAATILQFNNVEVLMHRRLDEDGYVACQVGYGNRSVDK 109
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VS+ M G F+++NV+PK+K+ EFRV+ ++ LLP+G+ P +FT GQ +DV ++ GKGF
Sbjct: 110 VSRQMLGHFATLNVNPKEKVTEFRVKNEEGLLPIGTHIKPDFFTEGQYLDVRSVSKGKGF 169
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKRHNF GLRA+HG S+ HR GS G QDPGRV KKM G MG VTV+N++++
Sbjct: 170 AGVMKRHNFKGLRASHGTSVMHRHGGSYGQNQDPGRVLPGKKMPGHMGVQNVTVQNVKIL 229
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD+ +I VKG VPG +++ ++D+ K
Sbjct: 230 KVDEANNVIWVKGAVPGP-NGTYVKIQDAIKK 260
>gi|261197061|ref|XP_002624933.1| 50S ribosomal protein L3 [Ajellomyces dermatitidis SLH14081]
gi|239595563|gb|EEQ78144.1| 50S ribosomal protein L3 [Ajellomyces dermatitidis SLH14081]
gi|239606530|gb|EEQ83517.1| 50S ribosomal protein L3 [Ajellomyces dermatitidis ER-3]
gi|327356287|gb|EGE85144.1| 50S ribosomal protein L3 [Ajellomyces dermatitidis ATCC 18188]
Length = 301
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 95/217 (43%), Positives = 136/217 (62%), Gaps = 3/217 (1%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
+R+G +A K GMT +++ G+RIP TVL LD QVV H+TL KNGY AVQVG G +
Sbjct: 71 LRTGALAIKKGMTAIFDLETGKRIPCTVLQLDRVQVVAHKTLKKNGYYAVQVGCGWKHER 130
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V++PM G F++ V+PK+ + EFRV+ ++ LLP+G + +F GQ VD + G G
Sbjct: 131 AVTRPMLGHFAANGVAPKRHIHEFRVKDENGLLPIGETINADWFQEGQYVDARSNSRGMG 190
Query: 120 FSGAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
F+G MKRH F G +HGVS++HR S + RV+ KKMAG MG RVT +NL+
Sbjct: 191 FAGVMKRHGFHGQDRSHGVSLTHRSMGSSGPGQGGGSRVYPGKKMAGNMGNERVTQQNLK 250
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
V+ VD ++G+++V G V G K + ++D+ K
Sbjct: 251 VLKVDAEKGIVVVNGSVSGP-KGCIVKLQDAIKKPWP 286
>gi|254569692|ref|XP_002491956.1| Mitochondrial ribosomal protein of the large subunit [Pichia
pastoris GS115]
gi|238031753|emb|CAY69676.1| Mitochondrial ribosomal protein of the large subunit [Pichia
pastoris GS115]
gi|328351549|emb|CCA37948.1| 50S ribosomal protein L3 [Pichia pastoris CBS 7435]
Length = 262
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 107/211 (50%), Positives = 145/211 (68%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ K GM Y EG RIP TVL +D +V ++T+ +GY AVQVG G K+KN
Sbjct: 52 RPGLIGVKRGMVPFYTNEGLRIPCTVLEIDQVEVTHNKTVANDGYSAVQVGYG-FKLKNQ 110
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+K M G F+ VSPK+K+ EF V+ DD LLPVG++ +F VG+ VD+ ++ GKGF+
Sbjct: 111 TKKMLGHFAKAQVSPKEKVVEFHVKSDDGLLPVGTLLKADHFKVGEFVDLQSISKGKGFA 170
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR NF GL+A+HGVS +HRS GSTG Q PGR KKMAGRMGG+ VT++N+EVV
Sbjct: 171 GVMKRWNFHGLKASHGVSKAHRSAGSTGGNQTPGRTLPGKKMAGRMGGHNVTLQNVEVVD 230
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V+ ++G IL+KG V GA S++ ++D+ K
Sbjct: 231 VNAEKGYILIKGPVSGA-TGSYVKIQDAIKR 260
>gi|322710687|gb|EFZ02261.1| 60S ribosomal protein L3 [Metarhizium anisopliae ARSEF 23]
Length = 639
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 100/217 (46%), Positives = 141/217 (64%), Gaps = 3/217 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
+R+GV+A K GMT ++ + RIP TVL LD QVV ++T +K+GY AVQ+GAG + +N
Sbjct: 382 LRAGVLATKKGMTSMFVGK-TRIPCTVLQLDQVQVVANKTREKHGYWAVQIGAGSRQPRN 440
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+ PM G++ + ++PK +L EF V+ + LLPVGS P +F GQ+VDV + G GF
Sbjct: 441 VTSPMLGYYEAKGIAPKSQLAEFTVRGREGLLPVGSQLLPDWFQTGQIVDVRAKSRGMGF 500
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP-GRVFKNKKMAGRMGGNRVTVKNLEV 179
+G MKRH F G A+HG S +HR+ G+TG Q RV KKM GRMG VTV+NL+V
Sbjct: 501 AGGMKRHGFAGQEASHGNSKNHRTIGTTGPSQGSGSRVLPGKKMPGRMGNEWVTVQNLKV 560
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
+ VD++ G++LV G VPG K + ++D+ K
Sbjct: 561 MKVDNELGIVLVSGAVPGP-KGRAVKLQDAKKRKAPA 596
>gi|51473839|ref|YP_067596.1| 50S ribosomal protein L3 [Rickettsia typhi str. Wilmington]
gi|81826293|sp|Q68W78|RL3_RICTY RecName: Full=50S ribosomal protein L3
gi|51460151|gb|AAU04114.1| 50S ribosomal protein L3 [Rickettsia typhi str. Wilmington]
Length = 215
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 115/213 (53%), Positives = 165/213 (77%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+G++A+K+GMT V+N +G RI +T++ +D CQVV H+TL K+GY A+ +G + K+
Sbjct: 1 MRTGIIAQKIGMTSVFNDKGERISLTLVKVDGCQVVGHKTLAKHGYNALVIGVKDQKISR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KPM+ F++ +SPK KL EFR+ + D+ + + S+ +F+VGQ VD+T TIGKGF
Sbjct: 61 VTKPMKQVFANAKISPKTKLKEFRISE-DNFIDIASILEVDHFSVGQFVDITATTIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++
Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNQVTIQNLKIF 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
++D R LI+++G +PG KNS++LV+D+ K A
Sbjct: 180 AIDTNRKLIMIQGSIPG-HKNSYLLVKDAIKKA 211
>gi|163783267|ref|ZP_02178260.1| elongation factor Tu [Hydrogenivirga sp. 128-5-R1-1]
gi|159881375|gb|EDP74886.1| elongation factor Tu [Hydrogenivirga sp. 128-5-R1-1]
Length = 236
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 99/222 (44%), Positives = 130/222 (58%), Gaps = 5/222 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M GV+ RKLGMT V+ +G +PVTV+ + VV ++ +K+GY AVQVGA EAK K+
Sbjct: 1 MGIGVIGRKLGMTRVFTSDGTAVPVTVIQVPANYVVQVKSPEKDGYSAVQVGAVEAKEKH 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP+ G FS NV + L EFRV D + F G LVDV G + G+GF
Sbjct: 61 LTKPLMGHFSKKNVKLLRYLKEFRVDNTQDYQEGQELKLEEVFKPGDLVDVVGTSKGRGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR +FGG +HG HR+ GS G R DPGRV+K KKMAG G ++ V++L VV
Sbjct: 121 AGTMKRWDFGGFPKSHG-HRYHRAVGSIGNRTDPGRVWKGKKMAGHWGAEKIRVQSLLVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV---RDSFKSAVNCKGK 219
V + GLILVKG VPG K I + R + + K
Sbjct: 180 DVIPEEGLILVKGSVPGPNKG-LIFIEQSRIASRKKQQLKQN 220
>gi|57867723|ref|YP_189394.1| 50S ribosomal protein L3 [Staphylococcus epidermidis RP62A]
gi|81819347|sp|Q5HLZ9|RL3_STAEQ RecName: Full=50S ribosomal protein L3
gi|57638381|gb|AAW55169.1| ribosomal protein L3 [Staphylococcus epidermidis RP62A]
Length = 220
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 94/223 (42%), Positives = 123/223 (55%), Gaps = 11/223 (4%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA------- 53
M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+QVG
Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60
Query: 54 -GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
G K +KP G + +PK+ + EFR D+ VG S F G ++DVT
Sbjct: 61 KGSKSNKYANKPAEGHAKKADTAPKRFIREFRNLNVDE-YEVGQEVSVDTFETGDIIDVT 119
Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
G++ GKGF GA+KRH G HG S HR+ GS G D +VFK +KM GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHGQGRGPMAHG-SHFHRAPGSVGMASDASKVFKGQKMPGRMGGNTV 178
Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
TV+NLEVV VD + +ILVKG VPG KK + + S K
Sbjct: 179 TVQNLEVVQVDTENSVILVKGNVPGPKKG-LVEITTSIKKGNK 220
>gi|242243947|ref|ZP_04798390.1| 50S ribosomal protein L3 [Staphylococcus epidermidis W23144]
gi|242232580|gb|EES34892.1| 50S ribosomal protein L3 [Staphylococcus epidermidis W23144]
gi|319400623|gb|EFV88848.1| 50S ribosomal protein L3 [Staphylococcus epidermidis FRI909]
Length = 220
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 93/223 (41%), Positives = 123/223 (55%), Gaps = 11/223 (4%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA------- 53
M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+QVG
Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60
Query: 54 -GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
G K +KP G + +PK+ + EFR D+ VG S F G ++DVT
Sbjct: 61 KGSKSNKYANKPAEGHAKKADTAPKRFIREFRNVNVDE-YEVGQEVSVDTFETGDIIDVT 119
Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
G++ GKGF GA+KRH G HG S HR+ GS G D +VFK +KM GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHGQGRGPMAHG-SHFHRAPGSVGMASDASKVFKGQKMPGRMGGNTV 178
Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
TV+NLEVV +D + +ILVKG VPG KK + + S K
Sbjct: 179 TVQNLEVVQIDTENSVILVKGNVPGPKKG-LVEITTSIKKGNK 220
>gi|169350795|ref|ZP_02867733.1| hypothetical protein CLOSPI_01569 [Clostridium spiroforme DSM 1552]
gi|169292381|gb|EDS74514.1| hypothetical protein CLOSPI_01569 [Clostridium spiroforme DSM 1552]
Length = 242
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 81/212 (38%), Positives = 119/212 (56%), Gaps = 4/212 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT V+ +G IPVTV+ V+ +T+ +GY A+QVG + + K
Sbjct: 1 MKGILGRKIGMTQVFTTDGLLIPVTVVEATENVVLQKKTVATDGYDAIQVGFEDKREKLA 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+K G N +PK+ + EFR + VG + F G++VDVTG + GKG+
Sbjct: 61 NKAELGIVKKANTAPKRFIKEFRFDEM-MSYEVGDKITVDSFVAGEVVDVTGTSKGKGYQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRH HG S +HR GS G P R+ KK+ G+MG TV+NLE+V+
Sbjct: 120 GVIKRHGQHIGPKGHG-SGAHRIVGSMGPIA-PNRIAPGKKLPGQMGHVTRTVQNLEIVA 177
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD + L+L+KG VPG KK ++V+ K+A
Sbjct: 178 VDVENNLLLIKGSVPGPKKG-LVIVKSGIKAA 208
>gi|284049257|ref|YP_003399596.1| 50S ribosomal protein L3 [Acidaminococcus fermentans DSM 20731]
gi|283953478|gb|ADB48281.1| 50S ribosomal protein L3 [Acidaminococcus fermentans DSM 20731]
Length = 219
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 94/216 (43%), Positives = 129/216 (59%), Gaps = 5/216 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGMT ++ +G +PVTV+ C V+ ++T +K+GY AVQ+G G+ K K
Sbjct: 1 MAKGILGKKLGMTQIFEADGTLVPVTVVEAGPCVVLQNKTEEKDGYNAVQLGFGDIKEKQ 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KPM+GFF V+P K + E R+ VG + F G LVD G++ GKGF
Sbjct: 61 VNKPMKGFFDKAGVAPVKVVREVRLDAP-SEYKVGDKIAADIFAAGDLVDAVGVSRGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTG--CRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
+G +KRHNF HG S SHR GS G GRV K KK+ GRMGG TV+ L
Sbjct: 120 AGTIKRHNFARGPMKHG-SKSHREPGSNGPMHSGPGGRVIKGKKLPGRMGGISATVQRLT 178
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
+ VD R LI+VKG VPGA +++L+RD+ + V
Sbjct: 179 IAKVDKDRNLIMVKGSVPGAA-GTFLLLRDTVRPDV 213
>gi|226198141|ref|ZP_03793712.1| 50S ribosomal protein L3 [Burkholderia pseudomallei Pakistan 9]
gi|225929661|gb|EEH25677.1| 50S ribosomal protein L3 [Burkholderia pseudomallei Pakistan 9]
Length = 208
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 93/201 (46%), Positives = 124/201 (61%), Gaps = 2/201 (0%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
MT ++ EG IPVTVL + + +V +T++ +GY AVQV G + V+KP+ G +
Sbjct: 1 MTRIFTAEGDSIPVTVLDVSDNRVTQIKTVETDGYTAVQVAFGSRRASRVTKPLAGHLAK 60
Query: 72 VNVSPKKKLFEFRVQKD-DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130
V + L EFR++ D L G+V P F VGQ VDV G++IGKG++G +KR+NFG
Sbjct: 61 AGVEAGEILKEFRIEADKAAELSNGAVIGPDLFEVGQKVDVQGVSIGKGYAGTIKRYNFG 120
Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190
RA+HG S SH GS G QDPGRVF K+M G MG VTV+NLE+ +D R L+L
Sbjct: 121 SGRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHMGDETVTVQNLEIARIDADRKLLL 180
Query: 191 VKGCVPGAKKNSWILVRDSFK 211
VKG VPGA K + V + K
Sbjct: 181 VKGAVPGA-KGGKVFVTPAVK 200
>gi|329116829|ref|ZP_08245546.1| 50S ribosomal protein L3 [Streptococcus parauberis NCFD 2020]
gi|326907234|gb|EGE54148.1| 50S ribosomal protein L3 [Streptococcus parauberis NCFD 2020]
Length = 208
Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 92/214 (42%), Positives = 129/214 (60%), Gaps = 6/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + +
Sbjct: 1 MTKGILGKKVGMTQIFTETGEFIPVTVIEAAANVVLQVKTIETDGYEAVQVGFDDKREIL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EF+ + L VGS + F G +VDVTG + GKGF
Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFKNIEG---LEVGSEITVDTFVAGDIVDVTGTSKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIV 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V ++ IL+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVIPEKNAILIKGNVPGAKK-SLITIKSAVKAAK 208
>gi|194099923|ref|YP_002003061.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae NCCP11945]
gi|193935213|gb|ACF31037.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae NCCP11945]
gi|317165376|gb|ADV08917.1| 50S ribosomal protein L3 [Neisseria gonorrhoeae TCDC-NG08107]
Length = 203
Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 98/201 (48%), Positives = 126/201 (62%), Gaps = 2/201 (0%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
MT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K V+K G F+
Sbjct: 1 MTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANRVNKAEAGHFAK 60
Query: 72 VNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130
V + L EF + ++ L G + S F VGQLVDVTG + GKGFSG +KRHNFG
Sbjct: 61 AGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKGFSGTIKRHNFG 120
Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190
R +HG S SHR GS G QDPGRVF K+MAG+ G + TV+ LEVV VD +R L+L
Sbjct: 121 AQRTSHGNSRSHRVPGSIGVAQDPGRVFPGKRMAGQYGNTKATVQKLEVVRVDAERQLLL 180
Query: 191 VKGCVPGAKKNSWILVRDSFK 211
VKG VPGA NS ++VR S K
Sbjct: 181 VKGAVPGAV-NSDVVVRPSVK 200
>gi|239980056|ref|ZP_04702580.1| 50S ribosomal protein L3 [Streptomyces albus J1074]
Length = 200
Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 93/202 (46%), Positives = 121/202 (59%), Gaps = 2/202 (0%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
MT V++ R +PVTV+ V RT D +GY AVQ+ GE + V+KP++G F+
Sbjct: 1 MTQVWDENNRVVPVTVVKAGANVVTQVRTNDTDGYEAVQIAFGEIDPRKVNKPLKGHFAK 60
Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
+V+P++ L E R D +G + F G VDVTG + GKGF+G MKRHNF G
Sbjct: 61 ADVTPRRHLVEIR-TADASEYTLGQELNADTFEAGLKVDVTGKSKGKGFAGVMKRHNFKG 119
Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
L A HG HRS GS G PGRVFK +MAGRMG RVT +NL V +VD ++GL+L+
Sbjct: 120 LGAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVHAVDAEKGLLLI 179
Query: 192 KGCVPGAKKNSWILVRDSFKSA 213
KG VPG +LVR + K A
Sbjct: 180 KGAVPGP-NGGLVLVRTAAKGA 200
>gi|149371629|ref|ZP_01891045.1| 50S ribosomal protein L3 [unidentified eubacterium SCB49]
gi|149355256|gb|EDM43816.1| 50S ribosomal protein L3 [unidentified eubacterium SCB49]
Length = 203
Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 80/208 (38%), Positives = 120/208 (57%), Gaps = 6/208 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ RK+GMT +++ G+ +P TV+ C V RT + +GY A+Q+G + K V
Sbjct: 1 MSGLIGRKIGMTSIFDENGKNLPCTVIECGPCVVTQVRTEEVDGYAALQLGFDDKKA--V 58
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+K G K+K+ EF+ D+ +G + +F G VDV G + GKGF
Sbjct: 59 NKAAEGHAKKAGTVAKRKVVEFKGF--DEEYKLGDTITVEHFAEGDFVDVAGTSKGKGFQ 116
Query: 122 GAMKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH F G +ATHG R+ GS G P RVFK +MAG+MG +V V+NL V+
Sbjct: 117 GVVKRHGFGGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGQMGNEKVKVQNLRVL 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
V ++ L++VKGCVPG KN+++ ++
Sbjct: 177 KVVAEKNLLVVKGCVPG-HKNAYVTIQK 203
>gi|251812047|ref|ZP_04826520.1| 50S ribosomal protein L3 [Staphylococcus epidermidis BCM-HMP0060]
gi|282875342|ref|ZP_06284215.1| 50S ribosomal protein L3 [Staphylococcus epidermidis SK135]
gi|293368433|ref|ZP_06615057.1| 50S ribosomal protein L3 [Staphylococcus epidermidis
M23864:W2(grey)]
gi|251804381|gb|EES57038.1| 50S ribosomal protein L3 [Staphylococcus epidermidis BCM-HMP0060]
gi|281296107|gb|EFA88628.1| 50S ribosomal protein L3 [Staphylococcus epidermidis SK135]
gi|291317391|gb|EFE57813.1| 50S ribosomal protein L3 [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329731174|gb|EGG67544.1| 50S ribosomal protein L3 [Staphylococcus epidermidis VCU144]
gi|329736435|gb|EGG72703.1| 50S ribosomal protein L3 [Staphylococcus epidermidis VCU028]
gi|329736982|gb|EGG73237.1| 50S ribosomal protein L3 [Staphylococcus epidermidis VCU045]
Length = 220
Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 94/223 (42%), Positives = 123/223 (55%), Gaps = 11/223 (4%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA------- 53
M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+QVG
Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEASQNVVLQKKTEEVDGYNAIQVGFEDKQAYK 60
Query: 54 -GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
G K +KP G + +PK+ + EFR D+ VG S F G ++DVT
Sbjct: 61 KGSKSNKYANKPAEGHAKKADTAPKRFIREFRNVNVDE-YEVGQEVSVDTFETGDIIDVT 119
Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
G++ GKGF GA+KRH G HG S HR+ GS G D +VFK +KM GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHGQGRGPMAHG-SHFHRAPGSVGMASDASKVFKGQKMPGRMGGNTV 178
Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
TV+NLEVV VD + +ILVKG VPG KK + + S K
Sbjct: 179 TVQNLEVVQVDTENSVILVKGNVPGPKKG-LVEITTSIKKGNK 220
>gi|270157910|ref|ZP_06186567.1| ribosomal protein L3 [Legionella longbeachae D-4968]
gi|289163830|ref|YP_003453968.1| 50S ribosomal subunit protein L3 [Legionella longbeachae NSW150]
gi|269989935|gb|EEZ96189.1| ribosomal protein L3 [Legionella longbeachae D-4968]
gi|288857003|emb|CBJ10817.1| 50S ribosomal subunit protein L3 [Legionella longbeachae NSW150]
Length = 216
Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 90/212 (42%), Positives = 127/212 (59%), Gaps = 1/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ +G +PV+V+ + +V +T+ +GY A+Q+ G K
Sbjct: 1 MMIGLLGRKIGMTRVFMADGVSVPVSVVEVHPNRVSQVKTITTDGYSAIQLTGGAKKPGK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP+ G F+ + L EF V +D + FT GQ VDV+G T GKGF
Sbjct: 61 VNKPLTGHFAKAEIEAGDMLVEFPVDSEDKFTAGQVISITDVFTAGQFVDVSGTTKGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR+NF ATHG S SHR GS G Q PGRVFK KKMAG MG R TV++LE+V
Sbjct: 121 AGTVKRYNFRTQDATHGNSRSHRVPGSIGQNQTPGRVFKGKKMAGHMGNVRCTVQSLELV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG +PGA + + ++ + K
Sbjct: 181 RVDAERNLLLIKGAIPGAP-GTRVEIKPAAKK 211
>gi|227888853|ref|ZP_04006658.1| 50S ribosomal protein L3 [Lactobacillus johnsonii ATCC 33200]
gi|227850690|gb|EEJ60776.1| 50S ribosomal protein L3 [Lactobacillus johnsonii ATCC 33200]
Length = 209
Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 84/214 (39%), Positives = 119/214 (55%), Gaps = 5/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT ++ G +PVTV+ V+ +T + +GY AVQVG + +
Sbjct: 1 MTKGILGRKVGMTQIFTKNGVLVPVTVIEATPNVVLQVKTNESDGYEAVQVGYQDMREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + SPK+ + E R + D VGS + F+ G +VDVTG T G G
Sbjct: 61 SNKPAKGHAAKAKTSPKRFIREIRDVELKD-YEVGSEITVDSFSEGDVVDVTGTTRGHGT 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR THG S HR GS G RV K KK+ G MGG +VTV+NL +
Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSI--INRVPKGKKLPGHMGGKKVTVQNLVIE 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V ++ ++L+KG VPGA KNS I V+ + K+A
Sbjct: 177 KVVPEKNVLLIKGNVPGA-KNSLIFVKSAAKAAK 209
>gi|78211928|ref|YP_380707.1| 50S ribosomal protein L3 [Synechococcus sp. CC9605]
gi|109893567|sp|Q3AMN0|RL3_SYNSC RecName: Full=50S ribosomal protein L3
gi|78196387|gb|ABB34152.1| 50S ribosomal protein L3 [Synechococcus sp. CC9605]
Length = 218
Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 79/216 (36%), Positives = 124/216 (57%), Gaps = 3/216 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGM+ ++ +GR +PVT++ C++ + D +GY AVQ+G GE + K
Sbjct: 1 MSIGILGKKLGMSQFFDEQGRAVPVTLIEAGPCRITQLKNDDTDGYSAVQIGFGETREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP +G + + L E+RV + L G + F GQ VDV+G T+G+GF
Sbjct: 61 INKPAQGHLNKSGEGLLRHLREYRVDSVEGLELGG-AITVGDFEAGQKVDVSGDTVGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G KRH F THG S +HR GSTG PGR++ K+MAGR GG ++T + L ++
Sbjct: 120 AGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKITTRGLTIL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
VD + L++VKG VPG + + +R + +
Sbjct: 179 KVDSEHNLLVVKGSVPGKP-GALLNIRPALRVGAKP 213
>gi|125716985|ref|YP_001034118.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK36]
gi|323350940|ref|ZP_08086598.1| 50S ribosomal protein L3 [Streptococcus sanguinis VMC66]
gi|166234600|sp|A3CK63|RL3_STRSV RecName: Full=50S ribosomal protein L3
gi|125496902|gb|ABN43568.1| 50S ribosomal protein L3, putative [Streptococcus sanguinis SK36]
gi|322122922|gb|EFX94628.1| 50S ribosomal protein L3 [Streptococcus sanguinis VMC66]
gi|324990002|gb|EGC21943.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK353]
gi|324991815|gb|EGC23740.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK405]
gi|324996295|gb|EGC28203.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK678]
gi|325686405|gb|EGD28435.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK72]
gi|325695810|gb|EGD37707.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK150]
gi|325697976|gb|EGD39859.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK160]
gi|327458431|gb|EGF04787.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK1]
gi|327463723|gb|EGF10039.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK1057]
gi|327467335|gb|EGF12835.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK330]
gi|327471742|gb|EGF17183.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK408]
gi|327490463|gb|EGF22245.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK1058]
gi|328945217|gb|EGG39371.1| 50S ribosomal protein L3 [Streptococcus sanguinis SK1087]
Length = 208
Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 90/214 (42%), Positives = 130/214 (60%), Gaps = 6/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + +
Sbjct: 1 MTKGILGKKVGMTQIFTEAGELIPVTVVEAAPNVVLQVKTVETDGYNAVQVGFDDLRDVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EF+ + L VG+ + F G +VDVTG + GKGF
Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFKNIEG---LEVGAEITVDTFEAGDVVDVTGTSKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFKNK++AGRMGGNRVT++NLE+V
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTIQNLEIV 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V ++ +IL+KG VPGAKK S I ++ + K+
Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKAGK 208
>gi|289449936|ref|YP_003475784.1| 50S ribosomal protein L3 [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289184483|gb|ADC90908.1| 50S ribosomal protein L3 [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 211
Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 86/213 (40%), Positives = 127/213 (59%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M ++ RK GMT +++ G +PVTV+ QVV +T++ +GY AV+VG + K
Sbjct: 1 MEKFMLGRKAGMTQLFDENGVAVPVTVIECGPVQVVQKKTVEVDGYSAVKVGFADKKETA 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP G F +SPK+ L EF V ++++ + +F VG VDV+G++ GKG+
Sbjct: 61 VNKPDLGQFKKAGISPKRFLKEFVVAENNEFAAGQELKVSDFFAVGDRVDVSGVSKGKGY 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH G HG S HR GS G PGRVFK KKM G+MG VTV+NL+VV
Sbjct: 121 QGNVKRHGQKGGPQAHG-SKYHRRVGSMGPNTWPGRVFKGKKMPGQMGNVNVTVQNLDVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VD +R +I +KG VPG + ++ ++++ K+
Sbjct: 180 LVDGERNIIALKGAVPGP-RGGYLSIKETVKAK 211
>gi|295660136|ref|XP_002790625.1| 54S ribosomal protein L9 [Paracoccidioides brasiliensis Pb01]
gi|226281500|gb|EEH37066.1| 54S ribosomal protein L9 [Paracoccidioides brasiliensis Pb01]
Length = 297
Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 96/217 (44%), Positives = 138/217 (63%), Gaps = 3/217 (1%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
+R+GV+A K GMT +++ G+R P T+L LD QV+ H+TL K+GY AVQVG G +
Sbjct: 74 LRTGVLAVKKGMTAIFDQETGKRTPCTILQLDQVQVISHKTLKKHGYFAVQVGCGWKHER 133
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V++PM G F++ V+PK+ + EFRV+ + LLP+G V + +F GQ VD + G G
Sbjct: 134 AVTRPMLGHFAANGVAPKRHIHEFRVKDESGLLPIGEVINADWFQEGQFVDARSNSRGMG 193
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ-DPGRVFKNKKMAGRMGGNRVTVKNLE 178
F G MKRH F G +HGVS++HRS GS G Q RV KKMAG MG +VT++NL+
Sbjct: 194 FEGVMKRHGFHGQDRSHGVSLAHRSLGSAGPSQGGGSRVHPGKKMAGNMGNEQVTLQNLK 253
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
V+ VD ++G+++V G V G K + ++D+ K
Sbjct: 254 VLKVDAEKGIVVVNGSVSGP-KGCIVKLQDALKKPWP 289
>gi|218440623|ref|YP_002378952.1| 50S ribosomal protein L3 [Cyanothece sp. PCC 7424]
gi|226725159|sp|B7KHY7|RL3_CYAP7 RecName: Full=50S ribosomal protein L3
gi|218173351|gb|ACK72084.1| ribosomal protein L3 [Cyanothece sp. PCC 7424]
Length = 212
Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 88/211 (41%), Positives = 122/211 (57%), Gaps = 4/211 (1%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
M G++ KLGMT +++ G IPVTV+H C + +T +GY ++Q+G GE K K
Sbjct: 1 MSVGILGTKLGMTQIFDKETGIAIPVTVIHAGPCPITQVKTPATDGYNSIQIGYGEVKEK 60
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
++KP G +P + L E+R++ D +G F G LVDV G TIG+G
Sbjct: 61 ALNKPKLGHLKKSASTPVRHLKEYRLENAAD-YQLGDGIKVDLFKPGDLVDVAGKTIGRG 119
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G KRHNF THG S +HR GSTG PGRV+ K+MAGR GG +VT++ L V
Sbjct: 120 FAGYQKRHNFKRGSMTHG-SKNHRLPGSTGAGTTPGRVYPGKRMAGRYGGTQVTIRKLTV 178
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
V +D +R LIL+KG VPG N + + +
Sbjct: 179 VQIDTERNLILIKGAVPGKPGN-LLSITPAK 208
>gi|329314933|gb|AEB89346.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus
T0131]
Length = 220
Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 93/223 (41%), Positives = 122/223 (54%), Gaps = 11/223 (4%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG------ 54
M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY A+QVG
Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEAKENVVLQKKTVEVDGYNAIQVGFEDKKAYK 60
Query: 55 --EAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
K +KP G + +PK+ + EFR D VG S F G ++DVT
Sbjct: 61 KDAKSNKYANKPAEGHAKKADAAPKRFIREFRNVDVDA-YEVGQEVSVDTFVAGDVIDVT 119
Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
G++ GKGF G +KRH +HG S HR+ GS G D RVFK +KM GRMGGN V
Sbjct: 120 GVSKGKGFQGGIKRHGQSRGPMSHG-SHFHRAPGSVGMASDASRVFKGQKMPGRMGGNTV 178
Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
TV+NLEVV VD + +ILVKG VPG KK + +R S K
Sbjct: 179 TVQNLEVVQVDTENKVILVKGNVPGPKKG-LVEIRTSIKKGNK 220
>gi|312866521|ref|ZP_07726738.1| 50S ribosomal protein L3 [Streptococcus downei F0415]
gi|311097952|gb|EFQ56179.1| 50S ribosomal protein L3 [Streptococcus downei F0415]
Length = 208
Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 93/214 (43%), Positives = 129/214 (60%), Gaps = 6/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + +
Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EF+ + L VGS + F G +VDVTG T GKGF
Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFKNIEG---LEVGSELTVEQFEAGDVVDVTGTTKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLE+
Sbjct: 118 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIA 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V + +IL+KG VPGAKK S I ++ + K+A
Sbjct: 176 QVVPEMNVILIKGNVPGAKK-SLITIKTAVKAAK 208
>gi|86141140|ref|ZP_01059686.1| 50S ribosomal protein L3 [Leeuwenhoekiella blandensis MED217]
gi|85831699|gb|EAQ50154.1| 50S ribosomal protein L3 [Leeuwenhoekiella blandensis MED217]
Length = 203
Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 81/206 (39%), Positives = 121/206 (58%), Gaps = 6/206 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT +++ G+ IP TV+ C V RT + +GY A+Q+G +AK
Sbjct: 1 MSGLIGKKVGMTSIFDENGKNIPCTVIEAGPCVVTQVRTEEVDGYSALQLGFDDAKTA-- 58
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+K +G K+K+ EF+ + + +G + F GQ VDV G + GKGF
Sbjct: 59 NKAAQGHAKKAGTVAKRKVVEFQDFEGE--YKLGDAVTVEVFKEGQFVDVAGTSKGKGFQ 116
Query: 122 GAMKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH F G ++THG R+ GS G P RVFK +MAG+MG RV V+NL V+
Sbjct: 117 GVVKRHGFGGVGQSTHGQHNRLRAPGSIGAASYPSRVFKGMRMAGQMGNERVKVQNLRVL 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
V ++ L++VKGCVPG KNS++++
Sbjct: 177 KVVAEKNLLVVKGCVPG-HKNSYVII 201
>gi|42518429|ref|NP_964359.1| 50S ribosomal protein L3 [Lactobacillus johnsonii NCC 533]
gi|268318851|ref|YP_003292507.1| ribosomal protein L3 [Lactobacillus johnsonii FI9785]
gi|300362389|ref|ZP_07058565.1| 50S ribosomal protein L3 [Lactobacillus gasseri JV-V03]
gi|81832300|sp|Q74L88|RL3_LACJO RecName: Full=50S ribosomal protein L3
gi|41582714|gb|AAS08325.1| 50S ribosomal protein L3 [Lactobacillus johnsonii NCC 533]
gi|262397226|emb|CAX66240.1| ribosomal protein L3 [Lactobacillus johnsonii FI9785]
gi|300353380|gb|EFJ69252.1| 50S ribosomal protein L3 [Lactobacillus gasseri JV-V03]
gi|329666692|gb|AEB92640.1| 50S ribosomal protein L3 [Lactobacillus johnsonii DPC 6026]
Length = 209
Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 84/214 (39%), Positives = 119/214 (55%), Gaps = 5/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT ++ G +PVTV+ V+ +T + +GY AVQVG + +
Sbjct: 1 MTKGILGRKVGMTQIFTKNGILVPVTVIEATPNVVLQVKTNESDGYEAVQVGYQDMREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + SPK+ + E R + D VGS + F+ G +VDVTG T G G
Sbjct: 61 SNKPAKGHAAKAKTSPKRFIREIRDVELKD-YEVGSEITVDSFSEGDVVDVTGTTRGHGT 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR THG S HR GS G RV K KK+ G MGG +VTV+NL +
Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSI--INRVPKGKKLPGHMGGKKVTVQNLVIE 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V ++ ++L+KG VPGA KNS I V+ + K+A
Sbjct: 177 KVVPEKNVLLIKGNVPGA-KNSLIFVKSAAKAAK 209
>gi|194335445|ref|YP_002017239.1| ribosomal protein L3 [Pelodictyon phaeoclathratiforme BU-1]
gi|226730543|sp|B4SBU7|RL3_PELPB RecName: Full=50S ribosomal protein L3
gi|194307922|gb|ACF42622.1| ribosomal protein L3 [Pelodictyon phaeoclathratiforme BU-1]
Length = 209
Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 87/207 (42%), Positives = 127/207 (61%), Gaps = 1/207 (0%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ +K+GMT ++N + + T++ C V + DK GY A Q+G GE K K VSKP
Sbjct: 4 ILGKKIGMTRLFNEKREAVSCTIIQAGPCFVTQVKRADKEGYDAYQIGIGERKEKKVSKP 63
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
++G + V+P KL EF ++ + L +GS S FT G+ V+V G++ GKGF+G M
Sbjct: 64 LQGHYKKAGVAPGFKLAEFDFKELNQELELGSAVSVESFTEGEKVNVLGVSKGKGFAGVM 123
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KRHNF G + THG S R+ GS G DP RVFK +MAGRMG + +TV+NL + +
Sbjct: 124 KRHNFSGGQRTHGQSDRQRAPGSVGGSSDPSRVFKGTRMAGRMGSDNITVRNLVIFKIMP 183
Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211
+ LI++KG VPG KNS++ + + K
Sbjct: 184 ESNLIVIKGSVPGP-KNSYVKIVSTKK 209
>gi|288818164|ref|YP_003432512.1| ribosomal protein L3 [Hydrogenobacter thermophilus TK-6]
gi|288787564|dbj|BAI69311.1| ribosomal protein L3 [Hydrogenobacter thermophilus TK-6]
gi|308751765|gb|ADO45248.1| 50S ribosomal protein L3 [Hydrogenobacter thermophilus TK-6]
Length = 235
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 84/221 (38%), Positives = 133/221 (60%), Gaps = 1/221 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT V+ +G IPVT++ + VV ++++K+GY A+Q+GA AK K+
Sbjct: 1 MAIGLIGKKVGMTRVFLKDGTAIPVTLIEIPPHTVVAIKSIEKDGYSALQLGAYSAKEKH 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP G V V ++L EFRV + F+ G+LVDV G++ G+GF
Sbjct: 61 LTKPEMGHLQKVGVRLLRRLKEFRVDDIAGYQVGQELTVADVFSPGELVDVVGISKGRGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR +FGG +HG HR+ GS G R DPGRV+K+K+MAG G +V +++L VV
Sbjct: 121 TGTMKRWDFGGFPKSHG-HRYHRAVGSIGNRSDPGRVWKSKRMAGHYGAQKVRIQSLFVV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
+ ++ L+LVKG VPG +L + + + + K++
Sbjct: 180 DIVPEKNLMLVKGSVPGPAGGLVVLEKSTIAERKSQRLKLN 220
>gi|282852649|ref|ZP_06261991.1| 50S ribosomal protein L3 [Lactobacillus gasseri 224-1]
gi|282556391|gb|EFB62011.1| 50S ribosomal protein L3 [Lactobacillus gasseri 224-1]
Length = 209
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 85/214 (39%), Positives = 119/214 (55%), Gaps = 5/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT ++ G +PVTV+ V+ +T + +GY AVQVG + +
Sbjct: 1 MTKGILGRKVGMTQIFTKNGILVPVTVIEATPNVVLQVKTNESDGYEAVQVGYQDMREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + SPK+ + E R + D VGS + F+ G +VDVTG T G G
Sbjct: 61 SNKPAKGHAAKAKTSPKRFIREIRDVELKD-YEVGSEITVDSFSEGDVVDVTGTTRGHGT 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR THG S HR GS G RV K KK+ G MGG +VTV+NL +
Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSI--INRVPKGKKLPGHMGGKKVTVQNLVIE 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V ++ ++LVKG VPGA KNS I V+ + K+A
Sbjct: 177 KVAPEKNVLLVKGNVPGA-KNSLIFVKSAAKAAK 209
>gi|116628963|ref|YP_814135.1| 50S ribosomal protein L3 [Lactobacillus gasseri ATCC 33323]
gi|238853483|ref|ZP_04643861.1| 50S ribosomal protein L3 [Lactobacillus gasseri 202-4]
gi|122274039|sp|Q046C5|RL3_LACGA RecName: Full=50S ribosomal protein L3
gi|116094545|gb|ABJ59697.1| LSU ribosomal protein L3P [Lactobacillus gasseri ATCC 33323]
gi|238833923|gb|EEQ26182.1| 50S ribosomal protein L3 [Lactobacillus gasseri 202-4]
Length = 209
Score = 200 bits (508), Expect = 2e-49, Method: Composition-based stats.
Identities = 85/214 (39%), Positives = 119/214 (55%), Gaps = 5/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT ++ G +PVTV+ V+ +T + +GY AVQVG + +
Sbjct: 1 MTKGILGRKVGMTQIFTKNGILVPVTVIEATPNVVLQVKTNESDGYEAVQVGYQDMREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + SPK+ + E R + D VGS + F+ G +VDVTG T G G
Sbjct: 61 SNKPAKGHAAKAKTSPKRFIREIRDVELKD-YEVGSEITVDSFSEGDVVDVTGTTRGHGT 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR THG S HR GS G RV K KK+ G MGG +VTV+NL +
Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSI--INRVPKGKKLPGHMGGKKVTVQNLVIE 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V ++ ++LVKG VPGA KNS I V+ + K+A
Sbjct: 177 KVVPEKNVLLVKGNVPGA-KNSLIFVKSAAKAAK 209
>gi|313204917|ref|YP_004043574.1| LSU ribosomal protein l3p [Paludibacter propionicigenes WB4]
gi|312444233|gb|ADQ80589.1| LSU ribosomal protein L3P [Paludibacter propionicigenes WB4]
Length = 205
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 81/204 (39%), Positives = 122/204 (59%), Gaps = 4/204 (1%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT V++ +G+ +P TV+ C V +T++ +GY AVQVG K+ +K
Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKTVETDGYEAVQVGFQTKTEKHTNK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
G F + V+P++ L EF+ + + +G + F VDV G + GKGF G
Sbjct: 63 AEAGIFKAAGVAPQRHLVEFKGFETE--FKLGDAITVELFEADTFVDVVGTSKGKGFQGV 120
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G +ATHG R+ GS G P RVFK +MAGR GG++VT++NL+V+ V
Sbjct: 121 VKRHGFGGVGQATHGQHNRLRAPGSLGASSYPSRVFKGMRMAGRTGGDKVTMQNLQVLKV 180
Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
+ LIL+KG VPGA K S +++
Sbjct: 181 IPEHNLILIKGSVPGA-KGSIVII 203
>gi|328768339|gb|EGF78386.1| hypothetical protein BATDEDRAFT_13292 [Batrachochytrium
dendrobatidis JAM81]
Length = 279
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 102/212 (48%), Positives = 133/212 (62%), Gaps = 3/212 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG-EAKVKN 60
R+G+VA K GMT +++ G+ +PVTVL + NCQV+ R +G V+VGA + +
Sbjct: 19 RTGLVALKKGMTSIFDEWGQMVPVTVLEVSNCQVIRTRFHAGSGKHMVEVGAVSQRRSYR 78
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+ + F VSPKKK+ EF V D +P G S+F GQ VDV G T+GKGF
Sbjct: 79 LHRAQLFHFRKYQVSPKKKITEFDVTP-DACIPSGVRLFASHFVAGQYVDVQGKTMGKGF 137
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G MKR FGG A+HGVSISHRS GS G QDPG+V+K KKM GRMGG T +NL+V+
Sbjct: 138 QGVMKRWGFGGQPASHGVSISHRSLGSIGQCQDPGKVWKGKKMPGRMGGVNRTTQNLKVI 197
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+D++ LI VKG VPG + N ++ V DS K
Sbjct: 198 KIDNQYNLIYVKGGVPGPE-NGYLRVTDSIKK 228
>gi|50309329|ref|XP_454671.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643806|emb|CAG99758.1| KLLA0E16039p [Kluyveromyces lactis]
Length = 273
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 99/216 (45%), Positives = 145/216 (67%), Gaps = 2/216 (0%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
+R G +++K+GM + G+RI TVL LDN +V++HRT +N Y A Q+G G +
Sbjct: 58 LRCGALSKKVGMMPYFEKETGKRIAATVLQLDNNEVILHRTPAENNYWACQIGYGNKSPE 117
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
NV++ M G F++ V+PK+K+ EFRV+ + LLPVGS+ PS+F GQ VD+ ++ GKG
Sbjct: 118 NVTRQMLGHFAAHVVNPKEKVTEFRVKDESGLLPVGSLIKPSWFKPGQYVDLRSISKGKG 177
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G MKR+ F GL+A+HGVS+SHRS GS G Q PGRV KKM G MG + VT++N++V
Sbjct: 178 FQGVMKRYGFKGLKASHGVSVSHRSGGSYGQNQTPGRVLPGKKMPGHMGVDTVTIQNVQV 237
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
+ V+D+ G +LVKG V G +++ ++D+ K
Sbjct: 238 LDVNDETGTVLVKGSVAGP-NGAFVKIQDAIKKPTP 272
>gi|153214894|ref|ZP_01949692.1| ribosomal protein L3 [Vibrio cholerae 1587]
gi|124115053|gb|EAY33873.1| ribosomal protein L3 [Vibrio cholerae 1587]
Length = 184
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 86/185 (46%), Positives = 116/185 (62%), Gaps = 1/185 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT V+ +G IPVTV+ ++ +V +TL+ +GY A+QV G K V
Sbjct: 1 MIGLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGSKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR++ ++ VGS + F + VDVTG + GKGF
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRLENGEE-FAVGSELTVELFNEVKKVDVTGTSKGKGFQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
GA+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V
Sbjct: 120 GAVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVR 179
Query: 182 VDDKR 186
VD +R
Sbjct: 180 VDAER 184
>gi|218779762|ref|YP_002431080.1| 50S ribosomal protein L3 [Desulfatibacillum alkenivorans AK-01]
gi|226725162|sp|B8FET5|RL3_DESAA RecName: Full=50S ribosomal protein L3
gi|218761146|gb|ACL03612.1| ribosomal protein L3 [Desulfatibacillum alkenivorans AK-01]
Length = 211
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 85/203 (41%), Positives = 118/203 (58%), Gaps = 2/203 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGMT +++ +GR IPVTV+ C V +T DK+GY A+Q+G G K ++
Sbjct: 1 MSKGILGKKLGMTGLFSSDGRHIPVTVIEAGPCVVTQIKTKDKDGYNALQLGFGPKKERH 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP G F + + EF V ++ +G S F VG+ +DV G++ G+GF
Sbjct: 61 TNKPETGHFEKSGGAAYVMVKEFAVDNPEE-FELGQSLSTELFAVGEKIDVAGVSKGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKRH FGG R THG R GS GC P +V K KK+ G G R TV+NLE+V
Sbjct: 120 AGVMKRHGFGGGRMTHGGRCKRR-PGSIGCSAWPSKVIKGKKLPGHYGVERKTVRNLEIV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSW 203
+ + LIL+KG VPGAK
Sbjct: 179 DIRADQNLILLKGAVPGAKSGML 201
>gi|15605616|ref|NP_212989.1| ribosomal protein L03 [Aquifex aeolicus VF5]
gi|3914748|sp|O66431|RL3_AQUAE RecName: Full=50S ribosomal protein L3
gi|2982767|gb|AAC06393.1| ribosomal protein L03 [Aquifex aeolicus VF5]
Length = 241
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 87/222 (39%), Positives = 126/222 (56%), Gaps = 4/222 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD-KNGYMAVQVGAGEAKVK 59
M G++ K+GMT V +G IPVTV+ VV ++ + K+GY A+Q+GA EAK K
Sbjct: 1 MPLGLIGEKVGMTRVLLKDGTAIPVTVIKFPVNYVVQVKSQNTKDGYNALQIGAYEAKEK 60
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+++KP+ G F V ++L+EFRV ++ + F G LVDV G++ G+G
Sbjct: 61 HLTKPLIGHFKKHGVPLLRRLWEFRVDNPEEFQSGQQLKVEDVFKPGDLVDVWGISKGRG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+GAMKR +F G +HG HR+ G+ G R DPGRV+K K+M G G V V+ L V
Sbjct: 121 FAGAMKRWDFAGFPKSHG-HRYHRAVGAIGQRTDPGRVWKGKRMPGHYGAKPVRVQGLFV 179
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF--KSAVNCKGK 219
V V + ILVKG VPG K ++ + + + + K K
Sbjct: 180 VDVLPEENAILVKGSVPGHNKGIVVVEQSTIAYRKSQKLKQK 221
>gi|323344636|ref|ZP_08084860.1| 50S ribosomal protein L3 [Prevotella oralis ATCC 33269]
gi|323093906|gb|EFZ36483.1| 50S ribosomal protein L3 [Prevotella oralis ATCC 33269]
Length = 204
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 85/204 (41%), Positives = 121/204 (59%), Gaps = 5/204 (2%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ RK+GMT V++ +G+ P TV+ + C V +T++K+GY AVQ+G GEAK K +
Sbjct: 3 GLIGRKIGMTSVFSADGKNTPCTVIEIGPCVVTQVKTVEKDGYKAVQLGFGEAKEKRTTM 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
PM G F +PKK L EF K D+ +G + F + VDV G + GKGF G
Sbjct: 63 PMMGIFKKAGTTPKKHLAEF---KFDEEYNLGDTLTVELFEGTEFVDVIGTSKGKGFQGV 119
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G ++THG R GS G P +VFK +MAG+MGG+RVT +NL V+ V
Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMAGQMGGDRVTTQNLRVLKV 179
Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
++ L++VKG G S +L+
Sbjct: 180 IPEQNLLIVKGSFAGC-NGSTVLI 202
>gi|164663113|ref|XP_001732678.1| hypothetical protein MGL_0453 [Malassezia globosa CBS 7966]
gi|159106581|gb|EDP45464.1| hypothetical protein MGL_0453 [Malassezia globosa CBS 7966]
Length = 336
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 102/220 (46%), Positives = 143/220 (65%), Gaps = 7/220 (3%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHR-----TLDKNGYMAVQVGAGE 55
+R G++ RK GMT ++ +G R+P TVL++D+ QV +H + D+ YMA+QV A +
Sbjct: 64 LRVGLITRKKGMTTMFMPDGTRVPATVLYVDSNQVSMHVQRDAPSQDEAPYMALQVAASD 123
Query: 56 AKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMT 115
A+ VS P+RG S + PK+ + EFRV D +LP+G+ S ++F GQ VDV +T
Sbjct: 124 ARESAVSAPVRGHLSRAGLGPKRVIKEFRVTP-DAMLPIGTQLSAAHFVPGQDVDVRAIT 182
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKGF+G MKRHNF G A+HG S++HR+ GS G QDPGRV+ K+M GRMGG+ TV+
Sbjct: 183 RGKGFAGVMKRHNFAGGNASHGASLAHRTPGSVGNNQDPGRVWPGKRMPGRMGGHYRTVQ 242
Query: 176 NLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
N+ V+ +D K LI VKG VPG + V+D+ KS V
Sbjct: 243 NVRVLRIDVKNELIFVKGQVPGPD-GGVVFVQDALKSMVK 281
>gi|255038089|ref|YP_003088710.1| 50S ribosomal protein L3 [Dyadobacter fermentans DSM 18053]
gi|254950845|gb|ACT95545.1| ribosomal protein L3 [Dyadobacter fermentans DSM 18053]
Length = 206
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 83/206 (40%), Positives = 122/206 (59%), Gaps = 3/206 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT +YN +G+ + TV+ C V R+ +K+GY A+Q+G GE K KN
Sbjct: 1 MSGLIGKKIGMTSLYNADGQALACTVIQAGPCVVTQVRSEEKDGYKAIQLGFGEKKEKNT 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
S+P+ G F N +PK+KL EF+ + + L F G+ VDV G G+GF
Sbjct: 61 SQPLIGHFKKANTTPKQKLVEFKEFEVEHELGTSLSVQ-DIFEEGEFVDVVGSAKGRGFQ 119
Query: 122 GAMKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH F G THG R GS G P RVFK +M GRMG NRV ++NL ++
Sbjct: 120 GVVKRHGFGGVGGQTHGQHNRARHPGSIGACSFPSRVFKGIRMGGRMGNNRVKIQNLRIL 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
V ++ +++V G VPG+ KNS++++
Sbjct: 180 KVIPEQNILVVSGSVPGS-KNSFLII 204
>gi|163791666|ref|ZP_02186061.1| 50S ribosomal protein L3 [Carnobacterium sp. AT7]
gi|159873045|gb|EDP67154.1| 50S ribosomal protein L3 [Carnobacterium sp. AT7]
Length = 210
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 91/214 (42%), Positives = 127/214 (59%), Gaps = 4/214 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT V+ G IPVTV+ V+ +T++ +GY AVQ+G E +
Sbjct: 1 MTKGILGKKVGMTQVFTESGELIPVTVIEATPNVVLQVKTMETDGYEAVQLGYQEKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP G + N +PK+ + EF + VG F VG +V+VTG T GKGF
Sbjct: 61 SNKPAMGHVAKANATPKRFIREFNDVVLGE-YEVGQEVKVDTFAVGDIVNVTGTTKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH +HG S HR GS G DP RVFK + GRMGGNRVT+KNLE+V
Sbjct: 120 QGVIKRHGHSRGPMSHG-SRHHRRPGSMGPV-DPNRVFKRTLLPGRMGGNRVTIKNLEIV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
SVD ++ ++L+KG VPG+KK S I ++ +F+ A
Sbjct: 178 SVDVEKNVLLIKGNVPGSKK-SLIQIKSAFQKAK 210
>gi|145525954|ref|XP_001448788.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124416354|emb|CAK81391.1| unnamed protein product [Paramecium tetraurelia]
Length = 409
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 97/220 (44%), Positives = 139/220 (63%), Gaps = 4/220 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+G++A K+GMT ++ G R +TVL LDN QVV + + Y +QVGAG +K +
Sbjct: 150 RAGLIAVKVGMTAQWDKWGYRHALTVLQLDNNQVVQV--VKNDTYTGLQVGAGAVNIKTL 207
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
KP G F N+ PKK + EF + +++LPVG + + +FT GQ +D+ G++ GKGF
Sbjct: 208 KKPQIGHFLKANIPPKKYIKEFPITP-ENVLPVGFMLTARHFTPGQYIDIQGISTGKGFG 266
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRHNF ATHG S+ HR GSTG RQDPGRVFK KKM G +G ++VT + +++
Sbjct: 267 GTVKRHNFKTQPATHGNSLCHRQLGSTGQRQDPGRVFKGKKMPGHLGNDKVTCEAIQIYR 326
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
+D R LI +KG VPG S + +RDS+K+ K ++
Sbjct: 327 IDAVRQLIYIKGSVPGKP-GSIVYLRDSWKAQKKNKELLN 365
>gi|304413145|ref|ZP_07394618.1| 50S ribosomal subunit protein L3 [Candidatus Regiella insecticola
LSR1]
gi|304283988|gb|EFL92381.1| 50S ribosomal subunit protein L3 [Candidatus Regiella insecticola
LSR1]
Length = 258
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 97/233 (41%), Positives = 132/233 (56%), Gaps = 26/233 (11%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +KLGMT V+ EG IPVTV+ ++ +V + + +GY AVQV G+ K + K
Sbjct: 28 GLIGKKLGMTRVFTEEGVSIPVTVIEIEKNRVTQVKDIKTDGYCAVQVTTGQKKTSRLKK 87
Query: 64 PMRGFF------------------------SSVNVSPKKKLFEFRVQKDDDLLPVGSVFS 99
P RG F S V+ + L+EFR+ +D G +
Sbjct: 88 PQRGHFEGTKTIRSKRATLDNPEIIKEVLTSKDPVTAGRGLWEFRI-AEDQKFLRGEEIT 146
Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159
F + VDVTG + GKGF+G +KR NF ATHG S+SHR+ GS G Q PG+VFK
Sbjct: 147 VEIFADVKKVDVTGTSKGKGFAGVVKRWNFRTQDATHGNSLSHRAPGSIGQNQTPGKVFK 206
Query: 160 NKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
KKMAG +G RVTV++L+VV VD KR L+LVKG VPGA + I V+ + K+
Sbjct: 207 GKKMAGHLGDERVTVQSLDVVRVDAKRNLLLVKGAVPGATGGNLI-VKPAVKA 258
>gi|54293321|ref|YP_125736.1| 50S ribosomal protein L3 [Legionella pneumophila str. Lens]
gi|81822454|sp|Q5WZL2|RL3_LEGPL RecName: Full=50S ribosomal protein L3
gi|53753153|emb|CAH14600.1| 50S ribosomal subunit protein L3 [Legionella pneumophila str. Lens]
Length = 216
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 93/212 (43%), Positives = 128/212 (60%), Gaps = 1/212 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ EG +PV+V+ + +V +T +GY AVQ+ G K
Sbjct: 1 MMIGLLGRKIGMTRVFTPEGVSVPVSVVEVHPNRVSQVKTAANDGYSAVQLTGGIKKSSK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VSKP+ G F+ + EFR+ +D P + FT GQ VDV+G+T GKGF
Sbjct: 61 VSKPVAGHFAKAQIDAGDMQVEFRIDSEDAFTPGQVISVADVFTAGQYVDVSGLTKGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KRHNF A+HG S SHR GS G Q PGRVFK KKMAG MG R T+++LE+V
Sbjct: 121 AGTVKRHNFRTQDASHGNSRSHRVPGSIGQNQTPGRVFKGKKMAGHMGNARCTIQSLELV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG +PGA S + ++ + K
Sbjct: 181 KVDSERNLLLIKGAIPGAP-GSRVEIKPAVKK 211
>gi|228470688|ref|ZP_04055539.1| 50S ribosomal protein L3 [Porphyromonas uenonis 60-3]
gi|228307545|gb|EEK16541.1| 50S ribosomal protein L3 [Porphyromonas uenonis 60-3]
Length = 205
Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats.
Identities = 81/204 (39%), Positives = 123/204 (60%), Gaps = 4/204 (1%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT V++ EG +P TV+ + C V +T D++GY A+Q+G +AK K+ ++
Sbjct: 3 GLLGKKIGMTSVFSAEGVNVPCTVIEVGPCVVTQVKTADRDGYEAIQLGFQDAKDKHTTR 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P++G F + V+ K+ L EF D +G + F VDV G + GKGF G
Sbjct: 63 PLQGHFKAAGVTNKRHLAEFMGFGSD--YKLGDEITVELFNDTHYVDVHGTSKGKGFQGV 120
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G ++THG R+ G+ G P +VFK +MAG+MG RVTV+NLEV+ V
Sbjct: 121 VKRHGFGGVGQSTHGQDDRLRAPGAVGACSYPAKVFKGTRMAGQMGNKRVTVQNLEVIKV 180
Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
+ ++++KG VPGA K S I +
Sbjct: 181 MPEHNILVLKGSVPGA-KGSIIAI 203
>gi|116624202|ref|YP_826358.1| 50S ribosomal protein L3P [Candidatus Solibacter usitatus
Ellin6076]
gi|122253082|sp|Q01W92|RL3_SOLUE RecName: Full=50S ribosomal protein L3
gi|116227364|gb|ABJ86073.1| LSU ribosomal protein L3P [Candidatus Solibacter usitatus
Ellin6076]
Length = 210
Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats.
Identities = 81/212 (38%), Positives = 119/212 (56%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVK 59
M G++ +K+GMT ++ +G+ +PVT+L C VV +T +GY AVQ+G E K +
Sbjct: 1 MSPGILGKKIGMTQIFRPDGQVVPVTLLKAGPCMVVQRKTPSTDGYDAVQLGLVEFIKPQ 60
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
++KP G V K + EF + D L G F VDV G++ GKG
Sbjct: 61 RINKPTAGRLKKAGVEGAKFMREFTLGPGSDDLKTGDQVLVDQFKPKDKVDVVGISKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G +KRH+F G +HG S+ HR+ GS G P RV +M G +G +VTV+NLEV
Sbjct: 121 FAGVVKRHHFRGGEGSHG-SMFHRAPGSIGASSFPSRVVPGMRMGGHLGNAQVTVRNLEV 179
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+ VD + +++VKG VPG ++LVR S +
Sbjct: 180 IDVDTEDNVLVVKGAVPGP-NGGYVLVRRSKR 210
>gi|170088428|ref|XP_001875437.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650637|gb|EDR14878.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 315
Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats.
Identities = 105/214 (49%), Positives = 133/214 (62%), Gaps = 5/214 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTL---DKNGYMAVQVGAGEAKV 58
R+GV+ARK GMT ++N +G R PVTVL L+NCQV + + Y A+QV A +
Sbjct: 48 RTGVIARKRGMTALWNDQGVRYPVTVLQLENCQVTANIRSTRRNHTEYHAIQVAASDKPA 107
Query: 59 KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
K + M G F V PK+ + EF + D +PVG+ S +F GQ VDV +IGK
Sbjct: 108 KGTTNQMLGHFRKAAVPPKRIVREFPITP-DAHIPVGTTLSAVHFVPGQFVDVVANSIGK 166
Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
GF G MKR F GL A+HGVS+SHRS GSTG QDPGR+F KKMAG MG R+T +NL
Sbjct: 167 GFQGGMKRWGFHGLAASHGVSVSHRSSGSTGQHQDPGRIFPGKKMAGHMGNKRITTQNLA 226
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VV VD LI V+G VPG N+ +L+RD+ K
Sbjct: 227 VVRVDTALDLIFVRGAVPGVD-NAHVLIRDAKKK 259
>gi|15604505|ref|NP_221023.1| 50S ribosomal protein L3 [Rickettsia prowazekii str. Madrid E]
gi|6226691|sp|P48952|RL3_RICPR RecName: Full=50S ribosomal protein L3
gi|3861199|emb|CAA15099.1| 50S RIBOSOMAL PROTEIN L3 (rplC) [Rickettsia prowazekii]
gi|292572287|gb|ADE30202.1| 50S ribosomal protein L3 [Rickettsia prowazekii Rp22]
Length = 216
Score = 199 bits (506), Expect = 3e-49, Method: Composition-based stats.
Identities = 115/213 (53%), Positives = 165/213 (77%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR+G++A+K+GMT V+N +G RI +T++ +D+CQVV H+TL K+GY A+ +G + K+
Sbjct: 1 MRTGIIAQKVGMTSVFNDKGERISLTLVKVDDCQVVGHKTLAKHGYNALVIGVKDQKISK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KPM+ F++ ++PK KL EFR+ + D+ + + S+ +F VGQ VD+T TIGKGF
Sbjct: 61 VTKPMKQVFANAKIAPKTKLKEFRISE-DNFIDIASILEVDHFRVGQFVDITATTIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G+MKRHNF GL A+HGVSISHRSHGSTG RQDPG+VFK KKMAG MG N+VT++NL++
Sbjct: 120 AGSMKRHNFRGLEASHGVSISHRSHGSTGQRQDPGKVFKGKKMAGHMGCNKVTIQNLKIF 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+VD R LI+++G +PG KNS++LV+D+ K A
Sbjct: 180 AVDTNRKLIMIQGSIPG-HKNSYLLVKDAIKKA 211
>gi|171913926|ref|ZP_02929396.1| 50S ribosomal protein L3 [Verrucomicrobium spinosum DSM 4136]
Length = 212
Score = 199 bits (505), Expect = 3e-49, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 125/215 (58%), Gaps = 4/215 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT VY +G + VTV+ + QVV + DK+GY AVQVG E K
Sbjct: 1 MSIGLIGKKVGMTQVYLKDGSAVAVTVIDVAGNQVVQVKNADKDGYTAVQVGYSEKKENR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SKP F N + K + EFR + + GS F G+ VDV G T GKGF
Sbjct: 61 CSKPELEHFKKHNATAKYVVREFRTEGEAPE--AGSTLGADKFADGEYVDVIGTTKGKGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
SG +KR+NF G A+HG S+ HR GS GCR PGRV+KN+KM GR G +R T +NL+VV
Sbjct: 119 SGVVKRYNFKGQPASHG-SMMHRRTGSIGCRLTPGRVWKNQKMPGRHGFDRRTTQNLKVV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
+ G++L+ G VPG S+++VR + K
Sbjct: 178 QSRAEDGVLLIAGAVPGP-NGSYVIVRPAIKKQTK 211
>gi|148268690|ref|YP_001247633.1| 50S ribosomal protein L3 [Staphylococcus aureus subsp. aureus JH9]
gi|189029484|sp|A5IV34|RL3_STAA9 RecName: Full=50S ribosomal protein L3
gi|147741759|gb|ABQ50057.1| LSU ribosomal protein L3P [Staphylococcus aureus subsp. aureus JH9]
Length = 220
Score = 199 bits (505), Expect = 3e-49, Method: Composition-based stats.
Identities = 92/223 (41%), Positives = 121/223 (54%), Gaps = 11/223 (4%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG------ 54
M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY A+QVG
Sbjct: 1 MTKGILGRKIGMTQVFGENGELIPVTVVEAKENVVLQKKTVEVDGYNAIQVGFEDKKAYK 60
Query: 55 --EAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
K +KP G + +PK+ + EFR D VG S F G ++DVT
Sbjct: 61 KDAKSNKYANKPAEGHAKKADAAPKRFIREFRNVDVDA-YEVGQEVSVDTFVAGDVIDVT 119
Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
G++ GKGF GA+KRH +H S HR+ S G D RVFK +KM GRMGGN V
Sbjct: 120 GVSKGKGFQGAIKRHGQSRGPMSH-SSHFHRAPDSVGMASDASRVFKGQKMPGRMGGNTV 178
Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
TV+NLEVV VD + +ILVKG VPG KK + +R S K
Sbjct: 179 TVQNLEVVQVDTENKVILVKGNVPGPKKG-LVEIRTSIKKGNK 220
>gi|220906719|ref|YP_002482030.1| 50S ribosomal protein L3 [Cyanothece sp. PCC 7425]
gi|254803669|sp|B8HMQ4|RL3_CYAP4 RecName: Full=50S ribosomal protein L3
gi|219863330|gb|ACL43669.1| ribosomal protein L3 [Cyanothece sp. PCC 7425]
Length = 212
Score = 199 bits (505), Expect = 3e-49, Method: Composition-based stats.
Identities = 86/209 (41%), Positives = 124/209 (59%), Gaps = 3/209 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ KLGMT +++ E R IPVTV+ C + +T +GY A+QV GE + K+
Sbjct: 1 MAVGILGTKLGMTQIFDQERRAIPVTVVQAGPCPITQIKTKQTDGYAAIQVAFGEVRAKS 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+SK G + N +P + L E+R + D VG V F+ GQ+VDVTG +IG+GF
Sbjct: 61 LSKAELGHLAKSNTAPMRHLHEYRTGEVD-QFQVGQVLKADLFSAGQVVDVTGTSIGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G KRHNF HG S +HR GSTG PGRV+ K+MAG++G R T++ L +V
Sbjct: 120 AGYQKRHNFKRGPMAHG-SKNHRLPGSTGAGTTPGRVYPGKRMAGQLGSARTTIRQLTIV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
VD +R L+L+KG VPG + + + +
Sbjct: 179 RVDPERNLVLIKGAVPGKP-GALVSITPA 206
>gi|163760799|ref|ZP_02167878.1| 50S ribosomal protein L3 [Hoeflea phototrophica DFL-43]
gi|162281843|gb|EDQ32135.1| 50S ribosomal protein L3 [Hoeflea phototrophica DFL-43]
Length = 223
Score = 199 bits (505), Expect = 3e-49, Method: Composition-based stats.
Identities = 136/209 (65%), Positives = 159/209 (76%), Gaps = 2/209 (0%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
MT VYN G +PVTVL L+NCQVV RT +KNGY AVQ+GAG AKVKN SK MRG F+
Sbjct: 1 MTRVYNDAGEHVPVTVLRLENCQVVAQRTEEKNGYTAVQLGAGVAKVKNTSKAMRGNFAI 60
Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
NV PK KL EFRV D+L+ VG+ S S+F GQLVDV+G+T GKGF+GAMKRH FGG
Sbjct: 61 ANVEPKAKLVEFRVSS-DNLIDVGAEISASHFVAGQLVDVSGVTQGKGFAGAMKRHGFGG 119
Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
LRATHGVS+SHRSHGSTG QDPG+V+K KKMAG MG RVT +NLE+VS D RGLIL+
Sbjct: 120 LRATHGVSVSHRSHGSTGSNQDPGKVWKGKKMAGHMGQTRVTTQNLEIVSTDADRGLILI 179
Query: 192 KGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
KG VPG+ K SWI+VRD+ KS + +
Sbjct: 180 KGAVPGS-KGSWIVVRDAIKSGIPADAPL 207
>gi|317496190|ref|ZP_07954550.1| 50S ribosomal protein L3 [Gemella moribillum M424]
gi|329770040|ref|ZP_08261435.1| 50S ribosomal protein L3 [Gemella sanguinis M325]
gi|316913765|gb|EFV35251.1| 50S ribosomal protein L3 [Gemella moribillum M424]
gi|328837351|gb|EGF86981.1| 50S ribosomal protein L3 [Gemella sanguinis M325]
Length = 220
Score = 199 bits (505), Expect = 3e-49, Method: Composition-based stats.
Identities = 90/224 (40%), Positives = 124/224 (55%), Gaps = 14/224 (6%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT ++ G IPVTV+ V+ +T + GY A+Q+G + + +
Sbjct: 1 MTKGILGRKVGMTQIFAENGELIPVTVVEAKGNVVLQKKTEEVEGYNAIQLGFDDKRPYD 60
Query: 61 V----------SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110
+KP +G N +PK+ + E R D VG F G LVD
Sbjct: 61 KERKDRLVKVANKPEQGHADKANTAPKRFVREIR-DADVASYEVGQEVQVDIFAAGDLVD 119
Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170
VTG++ GKGF GA+KRH HG S HR GS G P RVFK K + G+MGG
Sbjct: 120 VTGVSKGKGFQGAIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKALPGQMGGV 177
Query: 171 RVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VT +NLE+VSVD + GLILVKGC+PG+KK S++ ++ + KS
Sbjct: 178 TVTTQNLEIVSVDVENGLILVKGCIPGSKK-SFVKIQSAVKSGK 220
>gi|157151310|ref|YP_001451235.1| 50S ribosomal protein L3 [Streptococcus gordonii str. Challis
substr. CH1]
gi|262283583|ref|ZP_06061348.1| ribosomal protein L3 [Streptococcus sp. 2_1_36FAA]
gi|189029485|sp|A8AZM5|RL3_STRGC RecName: Full=50S ribosomal protein L3
gi|157076104|gb|ABV10787.1| ribosomal protein L3 [Streptococcus gordonii str. Challis substr.
CH1]
gi|262260640|gb|EEY79341.1| ribosomal protein L3 [Streptococcus sp. 2_1_36FAA]
Length = 208
Score = 199 bits (505), Expect = 3e-49, Method: Composition-based stats.
Identities = 89/214 (41%), Positives = 128/214 (59%), Gaps = 6/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + +
Sbjct: 1 MTKGILGKKVGMTQIFTEAGELIPVTVIEATPNVVLQVKTVETDGYNAVQVGFDDLRDVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EF+ + L VG+ + F G +VDVTG + GKGF
Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFKNIEG---LEVGAEITVDTFAAGDVVDVTGTSKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLE+
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIA 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V ++ +IL+KG VPGAKK S I ++ + K+
Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKAGK 208
>gi|294790411|ref|ZP_06755569.1| 50S ribosomal protein L3 [Scardovia inopinata F0304]
gi|294458308|gb|EFG26661.1| 50S ribosomal protein L3 [Scardovia inopinata F0304]
Length = 216
Score = 199 bits (505), Expect = 3e-49, Method: Composition-based stats.
Identities = 84/211 (39%), Positives = 118/211 (55%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R +V +KLGM+ V++ G +PVT++ + + +T + +GY AVQ+G G V
Sbjct: 7 RKALVGKKLGMSQVWDDNGFFVPVTLVDVSTNIITAVKTDETDGYKAVQLGYGAIDPTKV 66
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+ G F+ V+P++ L E R +D D G F GQ VDVTG T GKGF+
Sbjct: 67 TKPLAGHFAKAGVTPRRHLVEVR-TEDADSFEPGQELPVDTFADGQRVDVTGTTKGKGFA 125
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR F R THG + R GS G P R+ K K+MAGRMG N T + L VVS
Sbjct: 126 GTIKRWGFKSYRRTHGSHKNERRPGSVGACATPSRILKGKRMAGRMGNNTHTTQGLTVVS 185
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+ G++ +KG VPG K + +LVR + K
Sbjct: 186 SNVDSGILAIKGAVPGP-KGAIVLVRSAVKG 215
>gi|241888995|ref|ZP_04776299.1| 50S ribosomal protein L3 [Gemella haemolysans ATCC 10379]
gi|329768273|ref|ZP_08259774.1| 50S ribosomal protein L3 [Gemella haemolysans M341]
gi|241864244|gb|EER68622.1| 50S ribosomal protein L3 [Gemella haemolysans ATCC 10379]
gi|328837472|gb|EGF87101.1| 50S ribosomal protein L3 [Gemella haemolysans M341]
Length = 220
Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats.
Identities = 89/224 (39%), Positives = 124/224 (55%), Gaps = 14/224 (6%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT ++ G IPVTV+ V+ +T + GY A+Q+G + + +
Sbjct: 1 MTKGILGRKVGMTQIFAENGELIPVTVVEAKGNVVLQKKTEEVEGYNAIQLGFDDKRPYD 60
Query: 61 V----------SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110
+KP +G N +PK+ + E R + VG F G LVD
Sbjct: 61 KERKDRLVKVANKPEQGHADKANTAPKRFVREIR-DAEVANYEVGQEVQVDIFAAGDLVD 119
Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170
VTG++ GKGF GA+KRH HG S HR GS G P RVFK K + G+MGG
Sbjct: 120 VTGVSKGKGFQGAIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKALPGQMGGV 177
Query: 171 RVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VT +NLE+VSVD + GLILVKGC+PG+KK S++ ++ + KS
Sbjct: 178 TVTTQNLEIVSVDVENGLILVKGCIPGSKK-SFVKIQSAVKSGK 220
>gi|193214800|ref|YP_001995999.1| 50S ribosomal protein L3 [Chloroherpeton thalassium ATCC 35110]
gi|226725149|sp|B3QY24|RL3_CHLT3 RecName: Full=50S ribosomal protein L3
gi|193088277|gb|ACF13552.1| ribosomal protein L3 [Chloroherpeton thalassium ATCC 35110]
Length = 208
Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats.
Identities = 80/209 (38%), Positives = 118/209 (56%), Gaps = 1/209 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
S ++ +K+GMT +++ + IP TV+ C V +T+DK+GY A Q+ + K
Sbjct: 1 MSAILGKKIGMTSLFDENRKAIPCTVIEAGPCFVSQVKTVDKDGYAAYQICFDKKKENRT 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F V P K+ EFR + D L G S F G V V+G++ GKGF+
Sbjct: 61 AKPQLGHFQKSGVEPSYKMSEFRKEIFADELNAGDEVKVSIFKEGDTVKVSGVSKGKGFA 120
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR++FGG THG S R+ GS G P R FK ++MAGR G + VT++ L+VV
Sbjct: 121 GVVKRYHFGGGSKTHGQSDRLRAPGSVGGSSFPSRTFKGQRMAGRKGSDSVTIRGLKVVK 180
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
V + L+++KG VPG NS++ + S
Sbjct: 181 VLPESNLLVIKGAVPGP-NNSYLEIVTSK 208
>gi|71891975|ref|YP_277705.1| 50S ribosomal subunit protein L3 [Candidatus Blochmannia
pennsylvanicus str. BPEN]
gi|109893412|sp|Q493K8|RL3_BLOPB RecName: Full=50S ribosomal protein L3
gi|71796081|gb|AAZ40832.1| 50S ribosomal subunit protein L3 [Candidatus Blochmannia
pennsylvanicus str. BPEN]
Length = 217
Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats.
Identities = 86/217 (39%), Positives = 133/217 (61%), Gaps = 2/217 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +KLGMT +++ +G IPVT++ + +V + ++ +GY AVQV G K++
Sbjct: 1 MKGLIGQKLGMTRLFDKDGVSIPVTMIEITPHRVTQIKNIENDGYCAVQVTTGMKNFKHI 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDD-LLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++P G V + ++EFR ++ L +G + + F + VD+TG++ GKGF
Sbjct: 61 NRPETGHMIKSGVDAGRGVWEFRCEEAGMPQLSLGDIITIQIFKNVKKVDITGISKGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR NF A+HG S+SHR+ GS G Q PGRVFK KKMAG++G +VTV+NL+VV
Sbjct: 121 AGTIKRWNFHMQDASHGNSLSHRAPGSIGQNQTPGRVFKGKKMAGQLGNYKVTVQNLDVV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
+VD K L+LVKG VPG + ++ S K + K
Sbjct: 181 NVDVKLNLLLVKGAVPGTIGGNL-SIKKSVKINIREK 216
>gi|319940060|ref|ZP_08014414.1| 50S ribosomal protein L3 [Streptococcus anginosus 1_2_62CV]
gi|319810774|gb|EFW07101.1| 50S ribosomal protein L3 [Streptococcus anginosus 1_2_62CV]
Length = 208
Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats.
Identities = 89/214 (41%), Positives = 128/214 (59%), Gaps = 6/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + +
Sbjct: 1 MTKGILGKKVGMTQIFTEAGELIPVTVVEATPNVVLQVKTVETDGYNAVQVGFDDLRDVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EF+ + L VG+ + F G +VDVTG + GKGF
Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFKNIEG---LEVGAEITVDTFEAGDVVDVTGTSKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLE+
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIA 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V ++ +IL+KG VPGAKK S I ++ + K+
Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKAGK 208
>gi|320585734|gb|EFW98413.1| 50S ribosomal protein l3 [Grosmannia clavigera kw1407]
Length = 376
Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats.
Identities = 97/216 (44%), Positives = 134/216 (62%), Gaps = 2/216 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+GV+A K GMT Y+ G RIP TVL L++ QVV +T +GY AVQVG+G + V
Sbjct: 94 RTGVLATKRGMTAFYSKSGTRIPCTVLQLEDVQVVATKTRAGHGYWAVQVGSGTRRAATV 153
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+ P+ G++ + V+PK L EFRV+ LL G P +F VGQ VD ++ G GF+
Sbjct: 154 AAPLLGYYEAKGVAPKAHLAEFRVRDASGLLTPGVALQPDWFHVGQWVDTRSLSRGFGFA 213
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP-GRVFKNKKMAGRMGGNRVTVKNLEVV 180
GAMK+H F G THG S++HR+ G+TG Q RV KKM GRMG RVTV+NL V+
Sbjct: 214 GAMKKHGFKGQNKTHGNSLNHRTMGTTGPSQGSGSRVMPGKKMPGRMGCERVTVQNLNVL 273
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
VD++ G+++VKG V G K + + ++D+ K
Sbjct: 274 QVDNELGIVVVKGAV-GGPKGALVRLQDAVKKPQPS 308
>gi|330850884|ref|YP_004376634.1| 50S ribosomal protein L3 [Fistulifera sp. JPCC DA0580]
gi|328835704|dbj|BAK19000.1| 50S ribosomal protein L3 [Fistulifera sp. JPCC DA0580]
Length = 207
Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats.
Identities = 78/206 (37%), Positives = 123/206 (59%), Gaps = 2/206 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ K+GMT +++ G IPVT+L + C V +T K+GY ++QVG G K
Sbjct: 1 MSVGLLGNKIGMTQIFDESGNIIPVTILKVGPCVVTQVKTKSKDGYDSIQVGYGNVSPKA 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+++P G ++ P + L EFRV + ++ +G + + F+ GQL+++ G +IGKGF
Sbjct: 61 LTQPELGHLQKSDIQPLRYLKEFRVSE-ENEFNLGQILDVNSFSPGQLINIQGKSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
SG KR+NF THG S +HR+ GS G PGRV KKM+G++G T+K L+V+
Sbjct: 120 SGLQKRYNFSRGPMTHG-SKNHRAPGSIGMGTSPGRVLPGKKMSGQVGNKVTTIKKLKVI 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
V+ + ++++KG VPG N +V
Sbjct: 179 QVNLEENILVIKGSVPGKPGNLLSIV 204
>gi|124023995|ref|YP_001018302.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9303]
gi|166233177|sp|A2CC27|RL3_PROM3 RecName: Full=50S ribosomal protein L3
gi|123964281|gb|ABM79037.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9303]
Length = 218
Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats.
Identities = 82/219 (37%), Positives = 127/219 (57%), Gaps = 4/219 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGM+ ++ +GR IPVT++ C++ +T D +GY AVQ+G G+ + K
Sbjct: 1 MSIGILGKKLGMSQFFDDQGRAIPVTLIEAGPCRITQLKTSDIDGYAAVQIGFGDTREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP +G + K L E+RV+ + L + F GQ VDV+G T+G+GF
Sbjct: 61 INKPSKGHLTKSGEVLLKHLREYRVEGLEGLELGA-AITVGSFEAGQKVDVSGDTMGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
SG KRH F +HG S +HR GSTG PGR++ K+MAGR GG + T + L ++
Sbjct: 120 SGYQKRHGFSRGPMSHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKRTTRGLTIL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK-SAVNCKG 218
VD R L++VKG VPG + + +R + + + +G
Sbjct: 179 KVDSNRNLLVVKGSVPGKP-GALLNIRPAKRVGSKPAQG 216
>gi|34811555|pdb|1PNU|B Chain B, Crystal Structure Of A Streptomycin Dependent Ribosome
From Escherichia Coli, 50s Subunit Of 70s Ribosome. This
File, 1pnu, Contains Only Molecules Of The 50s Ribosomal
Subunit. The 30s Subunit, Mrna, P-Site Trna, And A-Site
Trna Are In The Pdb File 1pns.
gi|34811608|pdb|1PNY|B Chain B, Crystal Structure Of The Wild Type Ribosome From E. Coli,
50s Subunit Of 70s Ribosome. This File, 1pny, Contains
Only Molecules Of The 50s Ribosomal Subunit. The 30s
Subunit Is In The Pdb File 1pnx.
gi|56966347|pdb|1VOR|E Chain E, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
50s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966400|pdb|1VOU|E Chain E, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
50s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966453|pdb|1VOW|E Chain E, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
50s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966506|pdb|1VOY|E Chain E, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
50s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400.
gi|56966559|pdb|1VP0|E Chain E, Crystal Structure Of Five 70s Ribosomes From Escherichia
Coli In Complex With Protein Y. This File Contains The
50s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Five 70s Ribosomes And Is Described
In Remark 400
Length = 205
Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats.
Identities = 89/212 (41%), Positives = 122/212 (57%), Gaps = 7/212 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ K+GMT ++ R IPVTV+ C +V +T +GY AVQ+G + V
Sbjct: 1 MKGILGTKIGMTQIW-KNDRAIPVTVVLAGPCPIVQRKTAQTDGYEAVQIGYAPKAERKV 59
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KPM+G F+ V+P + L EFR D G + F G+ +D TG + GKG
Sbjct: 60 NKPMQGHFAKAGVAPTRILREFRGFAPD-----GDSVNVDIFAEGEKIDATGTSKGKGTQ 114
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR NF G A+HG HR GS G R+ PGRV+K K+MAG MG RVTV+NLEVV
Sbjct: 115 GVMKRWNFAGGPASHGSKKWHRRPGSIGQRKTPGRVYKGKRMAGHMGMERVTVQNLEVVE 174
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+ LILVKG +PGA +++R + K++
Sbjct: 175 IRAGENLILVKGAIPGA-NGGLVVLRSAAKAS 205
>gi|319938507|ref|ZP_08012901.1| 50S ribosomal protein L3 [Coprobacillus sp. 29_1]
gi|319806423|gb|EFW03090.1| 50S ribosomal protein L3 [Coprobacillus sp. 29_1]
Length = 244
Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats.
Identities = 80/220 (36%), Positives = 122/220 (55%), Gaps = 8/220 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT V+ +G+ IPVTV+ + V+ +T+ +GY A+QVG + + K
Sbjct: 1 MKGILGRKIGMTQVFTTDGKLIPVTVVEATSNVVLQKKTVATDGYDAIQVGFEDKREKLA 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+K +G + +PK+ + EFR + VG F G++VDVTG + GKG+
Sbjct: 61 TKAHKGHVAKAETAPKRFIKEFRYDEM-MSYEVGQEIKVDSFVAGEVVDVTGTSKGKGYQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRH HG S +HR GS G P R+ KK+ G+MG TV+NLE+V+
Sbjct: 120 GVIKRHGQSIGPKGHG-SGAHRIVGSMGPIA-PNRIAPGKKLPGQMGNVTRTVQNLEIVA 177
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
VD + ++L+ G +PG KK + K+AV GKV+
Sbjct: 178 VDVENNVLLISGSIPGPKKGLVV-----VKTAVKANGKVN 212
>gi|257784963|ref|YP_003180180.1| 50S ribosomal protein L3 [Atopobium parvulum DSM 20469]
gi|257473470|gb|ACV51589.1| ribosomal protein L3 [Atopobium parvulum DSM 20469]
Length = 206
Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats.
Identities = 90/209 (43%), Positives = 123/209 (58%), Gaps = 3/209 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M + ++ RKLGMT V++ +PVTV+ C V +T++ +GY AVQ+G G+ K+
Sbjct: 1 MVNTILGRKLGMTQVWDENDNVVPVTVVLAGPCTVSQVKTVETDGYNAVQIGFGDISEKH 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KPM G F + V P + L E RV +D G V + + F+ VDVTG + GKGF
Sbjct: 61 VNKPMAGHFKAQGVEPMRYLREVRV-EDASEHKTGDVVTVADFSEVTTVDVTGTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR NF THG S + R GS G P RV K M G MG RVTVKNL++V
Sbjct: 120 QGTVKRWNFSRGPMTHG-SRNQRRPGSIGQCAYPARVRKGLHMYGHMGAERVTVKNLKLV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
VD ++ L+L+KG VPG KN+ + VR +
Sbjct: 179 RVDAEQNLMLIKGAVPGG-KNALVQVRMA 206
>gi|229496170|ref|ZP_04389890.1| 50S ribosomal protein L3 [Porphyromonas endodontalis ATCC 35406]
gi|229316748|gb|EEN82661.1| 50S ribosomal protein L3 [Porphyromonas endodontalis ATCC 35406]
Length = 205
Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats.
Identities = 78/204 (38%), Positives = 114/204 (55%), Gaps = 4/204 (1%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT V++ +G P TV+ L C V +T + +GY A+Q+G E K+ +K
Sbjct: 3 GLLGKKIGMTSVFSADGVNTPCTVIELGPCVVTQVKTSEHDGYDALQLGFQETTEKHATK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P+ G F V+P + L EF+ D +G F VDV G + GKGF G
Sbjct: 63 PLMGHFKKAGVAPMRHLAEFKGFSGD--YKLGDTIKVDIFENVVYVDVIGTSKGKGFQGV 120
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+ RH F G ++THG R+ G+ G P +VFK +MAG+ G RVTV+NLEV+ V
Sbjct: 121 VGRHGFGGVGQSTHGQHNRLRAPGAVGACSYPAKVFKGTRMAGQTGNERVTVQNLEVIKV 180
Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
+ L+L+KG +PG K S + V
Sbjct: 181 MPEHNLLLIKGSIPG-HKGSIVAV 203
>gi|145596434|ref|YP_001160731.1| ribosomal protein L3 [Salinispora tropica CNB-440]
gi|212288412|sp|A4XBP6|RL3_SALTO RecName: Full=50S ribosomal protein L3
gi|145305771|gb|ABP56353.1| LSU ribosomal protein L3P [Salinispora tropica CNB-440]
Length = 219
Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats.
Identities = 93/205 (45%), Positives = 125/205 (60%), Gaps = 3/205 (1%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT V++ R +PVTV+ C V R+ +K+GY AVQ+ G + V
Sbjct: 6 KGILGAKLGMTQVWD-NNRVVPVTVVQAGPCVVSQVRSQEKDGYAAVQLAYGAIDPRKVK 64
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP+ G ++ +V+P++ + E R D G + F G VDVTG T GKG++G
Sbjct: 65 KPISGHYAKADVAPRRHIVELRTT-DAGEYSSGQEVTVEEFPAGISVDVTGKTKGKGYAG 123
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F GLRA+HGV HRS GS G PGRVFK +MAGRMGG R TV+NL V +V
Sbjct: 124 PMKRHGFHGLRASHGVERKHRSPGSIGGCATPGRVFKGTRMAGRMGGVRYTVQNLTVQAV 183
Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
D + L+LV+G +PG K + +LVR
Sbjct: 184 DTENNLLLVRGAIPGP-KGALVLVR 207
>gi|189347703|ref|YP_001944232.1| 50S ribosomal protein L3 [Chlorobium limicola DSM 245]
gi|226725145|sp|B3EGZ0|RL3_CHLL2 RecName: Full=50S ribosomal protein L3
gi|189341850|gb|ACD91253.1| ribosomal protein L3 [Chlorobium limicola DSM 245]
Length = 209
Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats.
Identities = 84/207 (40%), Positives = 126/207 (60%), Gaps = 1/207 (0%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ +K+GMT +YN + I TV+ C V ++ +K+GY A Q+G GE K ++KP
Sbjct: 4 ILGKKIGMTRLYNDKREAISCTVIQAGPCFVTQVKSAEKDGYDAYQIGIGERDEKKINKP 63
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
M+G + V+P + EF+ + + L G+ S F G+ V+V G++ GKGF+G +
Sbjct: 64 MQGHYRKAGVTPGFMMAEFKKTEFSENLEAGNPVSVESFKEGEKVNVLGVSKGKGFAGVV 123
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KRHNFGG THG S R+ GS G DP R F+ +MAGRMGG+ +TVKNLE+V +
Sbjct: 124 KRHNFGGGSRTHGQSDRLRAPGSVGGSSDPSRTFRGTRMAGRMGGDNITVKNLEIVKIMP 183
Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211
+ L+++KG VPG KNS++ + K
Sbjct: 184 ESNLLVIKGAVPGP-KNSYVKIVSIKK 209
>gi|152964657|ref|YP_001360441.1| ribosomal protein L3 [Kineococcus radiotolerans SRS30216]
gi|189042849|sp|A6W5T8|RL3_KINRD RecName: Full=50S ribosomal protein L3
gi|151359174|gb|ABS02177.1| ribosomal protein L3 [Kineococcus radiotolerans SRS30216]
Length = 219
Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats.
Identities = 86/212 (40%), Positives = 121/212 (57%), Gaps = 2/212 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
GV+ KLGMT +++ + R +PVTV+ ++ V RT +GY AVQ+ + +K
Sbjct: 8 GVLGTKLGMTQLWDADNRIVPVTVVKVEPNVVTQIRTTTVDGYEAVQLATTAIAQRKATK 67
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P G F V+P++ L E R D +G + F G VDV G T GKGF+G
Sbjct: 68 PAAGHFEKAGVAPRRHLVELRTT-DAADYSLGQEVTAEAFATGATVDVVGTTKGKGFAGV 126
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
MKRH F G+ A+HG +HR GS G PGRVFK +MAGRMG R T +NL V +VD
Sbjct: 127 MKRHGFHGVGASHGAHRNHRKPGSIGGCATPGRVFKGMRMAGRMGAARQTTQNLTVQAVD 186
Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
++GL+L+ G +PG + +LV+ + K+ V
Sbjct: 187 AEKGLLLITGAIPGP-RGGLVLVKSASKARVK 217
>gi|299830377|ref|YP_003734592.1| ribosomal protein L3 [Kryptoperidinium foliaceum]
gi|297385079|gb|ADI40377.1| ribosomal protein L3 [Kryptoperidinium foliaceum]
Length = 208
Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats.
Identities = 83/206 (40%), Positives = 119/206 (57%), Gaps = 2/206 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ K+GMT +++ G IPVT+L + C + +T K+GY A+QVG K+
Sbjct: 1 MSVGLLGNKIGMTQIFDETGNIIPVTILKVGPCTITQVKTEAKDGYNAIQVGYSNVSNKS 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+++P G N+ P K L EFRV D VG + F+ GQ V++ G TIGKGF
Sbjct: 61 LTQPELGHLQKSNIQPLKYLKEFRV-NSDHEFEVGQSLTLDLFSSGQFVNIQGKTIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G KRHNF THG S +HR+ GS G PGRV KKMAG++G TVK L+VV
Sbjct: 120 AGLQKRHNFTRGPMTHG-SKNHRAPGSIGMGTTPGRVLPGKKMAGQLGNKITTVKKLKVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
++ + ++++KG VPG N ++
Sbjct: 179 QLNLEENILVIKGSVPGKPGNLLTII 204
>gi|315222820|ref|ZP_07864706.1| 50S ribosomal protein L3 [Streptococcus anginosus F0211]
gi|315188123|gb|EFU21852.1| 50S ribosomal protein L3 [Streptococcus anginosus F0211]
Length = 208
Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats.
Identities = 89/214 (41%), Positives = 128/214 (59%), Gaps = 6/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + +
Sbjct: 1 MTKGILGKKVGMTQIFTEAGELIPVTVVEAAPNVVLQVKTVETDGYNAVQVGFDDLRDVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EF+ + L VG+ + F G +VDVTG + GKGF
Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFKNIEG---LEVGAEITVDTFAAGDVVDVTGTSKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G P RVFKNK +AGRMGGNRVT++NLE+
Sbjct: 118 QGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKHLAGRMGGNRVTIQNLEIA 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V ++ +IL+KG VPGAKK S I ++ + K+
Sbjct: 176 QVVPEKNVILIKGNVPGAKK-SLITIKSAVKAGK 208
>gi|313887083|ref|ZP_07820782.1| 50S ribosomal protein L3 [Porphyromonas asaccharolytica
PR426713P-I]
gi|312923494|gb|EFR34304.1| 50S ribosomal protein L3 [Porphyromonas asaccharolytica
PR426713P-I]
gi|332176633|gb|AEE12323.1| 50S ribosomal protein L3 [Porphyromonas asaccharolytica DSM 20707]
Length = 205
Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats.
Identities = 81/204 (39%), Positives = 123/204 (60%), Gaps = 4/204 (1%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT V++ EG +P TV+ + C V +T D++GY A+Q+G +AK K+ ++
Sbjct: 3 GLLGKKIGMTSVFSAEGVNVPCTVIEVGPCVVTQVKTADRDGYEAIQLGFQDAKDKHTTR 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P++G F + V+ K+ L EF D +G + F VDV G + GKGF G
Sbjct: 63 PLQGHFKAAGVTNKRHLAEFMGFGSD--YKLGDEITVELFNDTHYVDVHGTSKGKGFQGV 120
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G ++THG R+ GS G P +VFK +MAG++G RVTV+NLEV+ V
Sbjct: 121 VKRHGFGGVGQSTHGQDDRLRAPGSVGACSYPAKVFKGTRMAGQLGNKRVTVQNLEVIKV 180
Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
+ ++++KG VPGA K S I +
Sbjct: 181 MPEHNILVLKGSVPGA-KGSIIAI 203
>gi|33863999|ref|NP_895559.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9313]
gi|42559599|sp|Q7V542|RL3_PROMM RecName: Full=50S ribosomal protein L3
gi|33635583|emb|CAE21907.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9313]
Length = 218
Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats.
Identities = 79/216 (36%), Positives = 124/216 (57%), Gaps = 3/216 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGM+ ++ +GR IPVT++ C++ +T + +GY AVQ+G G+ + K
Sbjct: 1 MSIGILGKKLGMSQFFDDQGRAIPVTLIEAGPCRITQLKTSEIDGYAAVQIGFGDTREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP +G + K L E+RV+ + L + F GQ VDV+G T+G+GF
Sbjct: 61 INKPSKGHLTKSGEVLLKHLREYRVEGLEGLELGA-AITVGSFEAGQKVDVSGDTMGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G KRH F +HG S +HR GSTG PGR++ K+MAGR GG + T + L ++
Sbjct: 120 AGYQKRHGFSRGPMSHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKRTTRGLTIL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
VD R L++VKG VPG + + +R + +
Sbjct: 179 KVDSNRNLLVVKGSVPGKP-GALLNIRPAKRVGNKP 213
>gi|218282171|ref|ZP_03488470.1| hypothetical protein EUBIFOR_01052 [Eubacterium biforme DSM 3989]
gi|218216850|gb|EEC90388.1| hypothetical protein EUBIFOR_01052 [Eubacterium biforme DSM 3989]
Length = 235
Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats.
Identities = 82/224 (36%), Positives = 122/224 (54%), Gaps = 7/224 (3%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RKLGMT V+ +G IPVTV+ + V+ +T++ +GY AVQ+G E K K
Sbjct: 5 MMKGLLGRKLGMTQVFTEDGVLIPVTVVEVTPNVVLQKKTVETDGYNAVQLGFEEIKEKR 64
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+K G N SPK+ + E V+ D + VG + + F G+ VDV G + GKG+
Sbjct: 65 TTKANIGHCKKANTSPKRFIKE--VRDCDMDVNVGDLVNVDIFAAGETVDVIGTSKGKGY 122
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ---DPGRVFKNKKMAGRMGGNRVTVKNL 177
+G + R+N THG S + R GS GR+ K MAG+ GG T +NL
Sbjct: 123 NGTIVRNNAHQGPKTHGGSKNIRHIGSLATNGITSRQGRIMKGTIMAGQEGGYTTTNQNL 182
Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
V+ VD + +L+KG VPG +K ++VR + K++ K V+
Sbjct: 183 TVIKVDTENNYMLIKGNVPGPRKGC-VMVRTA-KTSKGDKEPVT 224
>gi|302344356|ref|YP_003808885.1| 50S ribosomal protein L3 [Desulfarculus baarsii DSM 2075]
gi|301640969|gb|ADK86291.1| 50S ribosomal protein L3 [Desulfarculus baarsii DSM 2075]
Length = 207
Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats.
Identities = 88/209 (42%), Positives = 123/209 (58%), Gaps = 3/209 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ EGR + VTVL + C VV +T D + Y A+Q+G G K KN
Sbjct: 1 MLKGLIGKKVGMTRLFLEEGRAVAVTVLEVGPCHVVQIKTEDNDQYNALQLGFGAKKAKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP G F V L EFRV +D VG + F +G V+VTG + G+GF
Sbjct: 61 VNKPTAGHFKKAGVEATSTLREFRV-EDVADFEVGQTITADMFKMGDSVNVTGRSKGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
SG +KRHNFGG R THG + +H + GS G DP RVFK ++ G G R V+NL++V
Sbjct: 120 SGVVKRHNFGGGRDTHGCT-THDAPGSIGQSADPSRVFKGVRLPGHYGAERKQVRNLKIV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
V ++ L++V+G VPG +LV +
Sbjct: 179 DVRPEQNLVVVRGAVPGP-NGGIVLVEKA 206
>gi|282882468|ref|ZP_06291089.1| 50S ribosomal protein L3 [Peptoniphilus lacrimalis 315-B]
gi|281297610|gb|EFA90085.1| 50S ribosomal protein L3 [Peptoniphilus lacrimalis 315-B]
Length = 209
Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats.
Identities = 89/209 (42%), Positives = 125/209 (59%), Gaps = 3/209 (1%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ RK+GMT +++ +G PV+V+ ++ V +T + +GY A+Q+ AG K V+KP
Sbjct: 4 LIGRKIGMTQIFDEKGIVTPVSVIEVEPNIVTQKKTPENDGYSAIQISAGAVKENKVNKP 63
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+G F VS K K + D D +G F VG+ VDV G + GKG +G +
Sbjct: 64 TKGHFDKAGVSYK-KYLSEFLTDDVDSYNLGDEIKVDIFEVGEHVDVIGTSKGKGTAGII 122
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KRH FG R THG S HR G G PG+VFKN +MAG+MG RVTV+NLE+V +D
Sbjct: 123 KRHGFGRGRETHG-SKFHRMPGGMGAASYPGKVFKNHRMAGKMGNERVTVQNLEIVRIDA 181
Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+ LILVKG +PG KK S + V+++ K A
Sbjct: 182 SKNLILVKGAIPGNKK-SKVFVKETVKKA 209
>gi|158520725|ref|YP_001528595.1| ribosomal protein L3 [Desulfococcus oleovorans Hxd3]
gi|226725163|sp|A8ZV57|RL3_DESOH RecName: Full=50S ribosomal protein L3
gi|158509551|gb|ABW66518.1| ribosomal protein L3 [Desulfococcus oleovorans Hxd3]
Length = 208
Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats.
Identities = 78/208 (37%), Positives = 117/208 (56%), Gaps = 3/208 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V++ +G +PVTV+ C V +T++ +GY A+Q+G E K
Sbjct: 1 MCRGIIGRKIGMTGVFSDQGEYVPVTVIEAGPCVVTQIKTVETDGYSALQLGFLEKKASK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP+ G F + E V D +G V + F+ G+ V V G+ G+GF
Sbjct: 61 INKPLAGHFKKSGGVGFAYVREMAVD-DPSAYTLGQVINAELFSAGEKVHVAGLMKGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KRH F G + THG SHR GS G P +VFK +K+ GR G R+T KNL++
Sbjct: 120 AGVVKRHGFAGGKDTHGCH-SHRVPGSIGTSAWPSKVFKGRKLPGRYGNTRITTKNLKIF 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
+ + LIL+KG VPG+ N + +R
Sbjct: 179 DIQPETNLILIKGAVPGS-NNGLVEIRK 205
>gi|317485822|ref|ZP_07944686.1| 50S ribosomal protein L3 [Bilophila wadsworthia 3_1_6]
gi|316922928|gb|EFV44150.1| 50S ribosomal protein L3 [Bilophila wadsworthia 3_1_6]
Length = 209
Score = 197 bits (502), Expect = 6e-49, Method: Composition-based stats.
Identities = 85/205 (41%), Positives = 122/205 (59%), Gaps = 2/205 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ RKLGMT ++ +G + VTV+ C V +T + +GY A+Q+ EAK K+V+K
Sbjct: 6 GILGRKLGMTRIFAGDGSAVAVTVVQAGPCPVTQVKTAETDGYNALQIAFEEAKEKHVTK 65
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
PM+G F+ + +K+ E R+ VG+V + F G + VTG ++GKG+ G
Sbjct: 66 PMKGHFAKAGTALYRKVREIRLDGPAA-YEVGAVLTADVFAAGDKIKVTGTSLGKGYQGV 124
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
M+R NF G + THG HRS GS G PG VFK +KMAG G +VTV+ LE+V V
Sbjct: 125 MRRWNFKGSKDTHGCEKVHRSGGSIGNNTFPGHVFKGRKMAGHWGAEQVTVQGLEIVDVR 184
Query: 184 DKRGLILVKGCVPGAKKNSWILVRD 208
+ +IL++G VPG KN +LVR
Sbjct: 185 TEDNVILIRGSVPGP-KNGLVLVRK 208
>gi|296105878|ref|YP_003617578.1| large subunit ribosomal protein L3 [Legionella pneumophila 2300/99
Alcoy]
gi|295647779|gb|ADG23626.1| large subunit ribosomal protein L3 [Legionella pneumophila 2300/99
Alcoy]
gi|307609138|emb|CBW98585.1| 50S ribosomal subunit protein L3 [Legionella pneumophila 130b]
Length = 215
Score = 197 bits (502), Expect = 6e-49, Method: Composition-based stats.
Identities = 92/211 (43%), Positives = 127/211 (60%), Gaps = 1/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT V+ EG +PV+V+ + +V +T +GY AVQ+ G K V
Sbjct: 1 MIGLLGRKIGMTRVFTPEGVSVPVSVVEVQPNRVSQVKTAANDGYSAVQLTGGTKKSSKV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SKP+ G F+ + EFR+ +D P + FT GQ VDV+G+T GKGF+
Sbjct: 61 SKPVAGHFAKAQIDAGDMQVEFRIDSEDAFTPGQVISVADVFTAGQYVDVSGLTKGKGFA 120
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRHNF A+HG S SHR GS G Q PGRVFK KKMAG MG R T+++LE+V
Sbjct: 121 GTVKRHNFRTQDASHGNSRSHRVPGSIGQNQTPGRVFKGKKMAGHMGNARCTIQSLELVK 180
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +R L+L+KG +PGA S + ++ + K
Sbjct: 181 VDSERNLLLIKGAIPGAP-GSRVEIKPAVKK 210
>gi|300120599|emb|CBK20153.2| unnamed protein product [Blastocystis hominis]
gi|300176505|emb|CBK24170.2| unnamed protein product [Blastocystis hominis]
Length = 250
Score = 197 bits (502), Expect = 6e-49, Method: Composition-based stats.
Identities = 107/207 (51%), Positives = 141/207 (68%), Gaps = 2/207 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+GVVA K+GM +++ RIP TVL ++NCQVV +T +K ++QVGAG KVKNV
Sbjct: 7 RTGVVALKIGMMPLWDKWCTRIPCTVLQIENCQVVQVKTKEKENTNSLQVGAGPVKVKNV 66
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+ G + SV V PK+ L EF+V + D LPVG+ + +F GQ V++ G+T GKGF
Sbjct: 67 NKPLFGHYKSVGVEPKRYLTEFKVTE-DAFLPVGTELTCKHFVPGQRVNIQGITQGKGFQ 125
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G M+R F GL A+HGVS+SHRS GSTG R+DPG+ FK KKM GRMG TV+NL V
Sbjct: 126 GVMRRWGFKGLGASHGVSVSHRSLGSTGQREDPGKTFKGKKMPGRMGNKNCTVQNLLVYK 185
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRD 208
+D KR L+ VKGCVPG ++ + D
Sbjct: 186 IDPKRNLVYVKGCVPG-NDGEYVKITD 211
>gi|258651363|ref|YP_003200519.1| 50S ribosomal protein L3 [Nakamurella multipartita DSM 44233]
gi|258554588|gb|ACV77530.1| ribosomal protein L3 [Nakamurella multipartita DSM 44233]
Length = 220
Score = 197 bits (502), Expect = 6e-49, Method: Composition-based stats.
Identities = 89/213 (41%), Positives = 119/213 (55%), Gaps = 1/213 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT V++ R +PVTV+ V RT + +GY AVQ G + V+
Sbjct: 6 KGILGHKLGMTQVFDEANRVVPVTVVAAGPVVVTAVRTPETDGYSAVQFAFGAVDPRKVN 65
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP G F V+P++ L E R + + F G +VDVTG + GKG +G
Sbjct: 66 KPAAGQFVKAGVTPRRHLVELRTDDVSGYSVGQELTAAEVFDAGAVVDVTGTSKGKGTAG 125
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F GL A HGV HRS GS G PGRVFK +MAGRMG +VTV+NL V +V
Sbjct: 126 VMKRHGFAGLGAGHGVQRKHRSPGSIGGCSTPGRVFKGLRMAGRMGNAKVTVQNLTVHAV 185
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D RGL+L+ G VPG K ++++ + K+
Sbjct: 186 DADRGLVLINGAVPGP-KGGLVMIKSAVKNQSK 217
>gi|269122581|ref|YP_003310758.1| ribosomal protein L3 [Sebaldella termitidis ATCC 33386]
gi|268616459|gb|ACZ10827.1| ribosomal protein L3 [Sebaldella termitidis ATCC 33386]
Length = 208
Score = 197 bits (502), Expect = 7e-49, Method: Composition-based stats.
Identities = 90/209 (43%), Positives = 122/209 (58%), Gaps = 4/209 (1%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ +K+GMT ++ + IPVTV+ V+ + ++K+GY A+ +G E K KN KP
Sbjct: 2 LLGKKIGMTQIF-EGEKLIPVTVIEAGPNFVIQKKNVEKDGYNALTLGYDEKKEKNTIKP 60
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
G F V+PKK L EFR D +G F + VDV+G + GKG +G M
Sbjct: 61 EMGVFKKAGVTPKKFLKEFRTDNLDS-YELGQEIKVDSFEGIEFVDVSGTSKGKGTAGVM 119
Query: 125 KRHNFGGLRATHGVSISHRSHGS-TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
KRHNFGG RATHGVS +HR GS G V K KKMAGR+G VTV+NL VV D
Sbjct: 120 KRHNFGGNRATHGVSRNHRLGGSNAGGAASNSNVPKGKKMAGRLGNENVTVQNLRVVKFD 179
Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+ L+LVKG +PG KN +++++ S K
Sbjct: 180 VENNLLLVKGAIPGP-KNGYLVIKKSVKK 207
>gi|238061121|ref|ZP_04605830.1| 50S ribosomal protein L3 rplC [Micromonospora sp. ATCC 39149]
gi|57547707|gb|AAW52546.1| RplC [Micromonospora sp. ATCC 39149]
gi|237882932|gb|EEP71760.1| 50S ribosomal protein L3 rplC [Micromonospora sp. ATCC 39149]
Length = 223
Score = 197 bits (502), Expect = 7e-49, Method: Composition-based stats.
Identities = 90/205 (43%), Positives = 126/205 (61%), Gaps = 3/205 (1%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT V++ + +PVTV+ C V R+ +K+GY AVQ+ G + V
Sbjct: 6 KGILGAKLGMTQVWD-NNKVVPVTVVQAGPCVVSQVRSAEKDGYSAVQLAYGTIDPRKVK 64
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP+ G ++ +V+P++ + E R D +G + F G +DVTG T GKG++G
Sbjct: 65 KPVSGHYAKADVAPRRHIVELRTT-DAADYSLGQEVTVEQFPAGVTIDVTGKTKGKGYAG 123
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F GLRA+HGV HRS GS G PGRVFK +MAGRMGG R TV+NL V ++
Sbjct: 124 PMKRHGFHGLRASHGVERKHRSPGSIGACATPGRVFKGTRMAGRMGGVRYTVQNLTVQAI 183
Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
D + L+LV+G +PG K + +LVR
Sbjct: 184 DTENNLLLVRGAIPGP-KGALVLVR 207
>gi|296120747|ref|YP_003628525.1| ribosomal protein L3 [Planctomyces limnophilus DSM 3776]
gi|296013087|gb|ADG66326.1| ribosomal protein L3 [Planctomyces limnophilus DSM 3776]
Length = 245
Score = 197 bits (502), Expect = 7e-49, Method: Composition-based stats.
Identities = 86/230 (37%), Positives = 122/230 (53%), Gaps = 22/230 (9%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ +G IPVTV+ C V+ RT++++GY AVQ+G + +
Sbjct: 14 MSCGLLGRKVGMTQVFTPQGEAIPVTVIECGPCVVLQIRTVERDGYSAVQLGFSDKPRRL 73
Query: 61 VSKPMRGF-------------------FSSVNVSPKKKLFEFRVQKDDDLLPVGSVF--S 99
S+ RG + PK+ + EFRV ++
Sbjct: 74 ASRSERGHVAAIDSKRRKSLAAAGVALAEKADCEPKRFVREFRVTPEEASAFTVGQVLTV 133
Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159
F + VDV G + G+GF+G MKRHNF G A+HGV HRS GSTG DPG+VFK
Sbjct: 134 SQIFGEVKHVDVVGTSKGRGFAGVMKRHNFHGTCASHGVKKVHRSGGSTGQSTDPGKVFK 193
Query: 160 NKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
KM G G +VTV+ L+VV DD+ ++LV+G VPG ++ VR +
Sbjct: 194 GTKMPGHYGDAQVTVRRLQVVRADDENNVLLVRGAVPGYS-GGFVRVRKT 242
>gi|238810297|dbj|BAH70087.1| hypothetical protein [Mycoplasma fermentans PG18]
Length = 276
Score = 197 bits (502), Expect = 7e-49, Method: Composition-based stats.
Identities = 81/217 (37%), Positives = 121/217 (55%), Gaps = 6/217 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT ++ G +PVTV+ + V + DKNGY+A Q+ GE K
Sbjct: 1 MMKGILGRKIGMTQIFTELGASVPVTVIEVQPNVVTKVLSADKNGYVATQIAVGEKKEHR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP++G F+ +PK+ + E R + +G + F G+LVD+TG + GKGF
Sbjct: 61 SNKPLKGQFAQAKTTPKRYVKEIRGMQG---YELGQTIKANIFKAGELVDITGTSKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP--GRVFKNKKMAGRMGGNRVTVKNLE 178
+G +KR N +HG + TG D RVFK M G +G R TV+NLE
Sbjct: 118 AGTIKRWNQHIGPKSHGGGGGSQPVRQTGSLGDISGNRVFKGMTMPGHLGAVRTTVQNLE 177
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
+V VD ++LVKG +PGA KNS++++R++ K N
Sbjct: 178 IVKVDVANNIMLVKGSIPGA-KNSYVMIREAVKGLPN 213
>gi|21674998|ref|NP_663063.1| 50S ribosomal protein L3 [Chlorobium tepidum TLS]
gi|42559650|sp|Q8KAH2|RL3_CHLTE RecName: Full=50S ribosomal protein L3
gi|21648231|gb|AAM73405.1| ribosomal protein L3 [Chlorobium tepidum TLS]
Length = 209
Score = 197 bits (502), Expect = 7e-49, Method: Composition-based stats.
Identities = 86/207 (41%), Positives = 117/207 (56%), Gaps = 1/207 (0%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ +K+GMT +YN + +P TV+ C V ++ +K+GY A Q+G GE K VSKP
Sbjct: 4 ILGKKIGMTRLYNDKREAVPCTVIQAGPCYVTQVKSTEKDGYEAYQLGFGERDEKKVSKP 63
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+ G + +P L E L G+ F G V+V G+T GKGF+G +
Sbjct: 64 LAGHYKKAGKNPGYILSEVSKSLIVGELEAGATVPVDVFKEGDKVNVLGVTKGKGFAGVV 123
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KRHNFGG THG S R+ GS G DP R FK +MAGRMGG TV+NL +V V
Sbjct: 124 KRHNFGGGSRTHGQSDRLRAPGSVGGSSDPSRTFKGTRMAGRMGGKNKTVQNLVIVKVMP 183
Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211
+ LI+VKG VPG KNS++ + + K
Sbjct: 184 ESNLIVVKGAVPGP-KNSYVKIVSTTK 209
>gi|218961433|ref|YP_001741208.1| 50S ribosomal subunit protein L3 [Candidatus Cloacamonas
acidaminovorans]
gi|167730090|emb|CAO81002.1| 50S ribosomal subunit protein L3 [Candidatus Cloacamonas
acidaminovorans]
Length = 210
Score = 197 bits (502), Expect = 7e-49, Method: Composition-based stats.
Identities = 83/209 (39%), Positives = 122/209 (58%), Gaps = 3/209 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT V++ +G+ IPVTV+ C+V+ RT +NGY A+Q+G E + V
Sbjct: 1 MIGLIGKKIGMTQVFDSDGKVIPVTVIKAGPCKVICKRTEAENGYEAIQIGYEEIPARKV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
SKP++G F N + + EFR + + +G F + V V+ + G+G
Sbjct: 61 SKPLQGHFKKYNSPFYRYVREFRPSYGQHIESVQIGDELKADIFGENETVSVSANSKGRG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G MKRHNFGG ++HG S R GS G P RVFK KMAG+ G +VTV +L+V
Sbjct: 121 FTGVMKRHNFGGFISSHGSHESFRGPGSIGQCAQPSRVFKGMKMAGQYGNTKVTVHHLKV 180
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRD 208
+ VD + LI+VKG VPG +NS + +
Sbjct: 181 IKVDPENNLIMVKGAVPG-HRNSLVTIHK 208
>gi|218294754|ref|ZP_03495608.1| ribosomal protein L3 [Thermus aquaticus Y51MC23]
gi|218244662|gb|EED11186.1| ribosomal protein L3 [Thermus aquaticus Y51MC23]
Length = 206
Score = 197 bits (502), Expect = 7e-49, Method: Composition-based stats.
Identities = 94/213 (44%), Positives = 122/213 (57%), Gaps = 7/213 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ K+GMT +Y + R IPVTV+ C VV RT +K+GY AVQ+G K V
Sbjct: 1 MKGILGTKVGMTRIYRED-RAIPVTVILAGPCPVVQRRTPEKDGYTAVQLGFLAQKPGRV 59
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
++PM+G F+ V P + L E R + G V + F G+ VDVTG + G+G +
Sbjct: 60 NRPMKGHFAKAGVQPVRILKEIRDFNPE-----GDVVTVEIFKPGERVDVTGTSKGRGTA 114
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR NF G +HG HR GS G R+ PGRV+K KKMAG G RVTV NLEVV
Sbjct: 115 GVMKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGKKMAGHYGAERVTVVNLEVVD 174
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V + L+LVKG VPG ++VR + K A
Sbjct: 175 VIPEENLLLVKGAVPGP-NGGLVVVRQTKKVAK 206
>gi|310798524|gb|EFQ33417.1| 50S ribosomal protein L3 [Glomerella graminicola M1.001]
Length = 347
Score = 197 bits (502), Expect = 8e-49, Method: Composition-based stats.
Identities = 103/217 (47%), Positives = 144/217 (66%), Gaps = 3/217 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
+R+GV+A K GMT VY + +R+P TVL LD QVV ++T KNGY AVQ+GAG + +N
Sbjct: 90 LRTGVLAIKKGMTAVYYGK-KRVPCTVLQLDQVQVVANKTRAKNGYWAVQIGAGSKEPRN 148
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V +P+ G++ + ++PK+ L EF+V+ ++ LLPVGS P +F GQ VDV + G GF
Sbjct: 149 VERPLLGYYEAKGIAPKRHLAEFKVRSEEGLLPVGSQLFPDWFQTGQYVDVRSNSRGMGF 208
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP-GRVFKNKKMAGRMGGNRVTVKNLEV 179
+G MKRH F G A+HG S++HR+ G+TG Q RV KKM GRMG RVTV+NL V
Sbjct: 209 AGGMKRHGFAGQEASHGNSLNHRTIGTTGPSQGSGSRVLPGKKMPGRMGNERVTVQNLTV 268
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
+ VD++ G++LVKG V G KN + ++D+ K
Sbjct: 269 LKVDNELGVVLVKGAV-GGPKNCIVQLQDAKKRKPPA 304
>gi|295135701|ref|YP_003586377.1| 50S ribosomal protein L3 [Zunongwangia profunda SM-A87]
gi|294983716|gb|ADF54181.1| 50S ribosomal protein L3 [Zunongwangia profunda SM-A87]
Length = 203
Score = 197 bits (501), Expect = 8e-49, Method: Composition-based stats.
Identities = 80/208 (38%), Positives = 125/208 (60%), Gaps = 6/208 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT +++ G+ IP TV+ C + RT + +GY A+Q+G + K
Sbjct: 1 MSGLIGKKIGMTSIFDENGKNIPCTVIEAGPCVITQVRTNEVDGYEALQLGFDDKKTA-- 58
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+K G V+ ++K+ EF+ + D +G + +F G+ VD++G + GKGF
Sbjct: 59 NKAATGHAKKAGVAAQRKVVEFQGFEGD--YKLGDTINVEHFKEGEFVDISGTSKGKGFQ 116
Query: 122 GAMKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH F G ++THG R+ GS G P RVFK +MAGRMGG +V V+NL V+
Sbjct: 117 GVVKRHGFGGVGQSTHGQHNRLRAPGSIGAASYPARVFKGMRMAGRMGGEKVKVENLRVL 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
V ++ L++VKGCVPG KNS++++R
Sbjct: 177 KVVAEKNLLVVKGCVPG-HKNSYVIIRK 203
>gi|206900842|ref|YP_002250701.1| ribosomal protein L3 [Dictyoglomus thermophilum H-6-12]
gi|206739945|gb|ACI19003.1| ribosomal protein L3 [Dictyoglomus thermophilum H-6-12]
Length = 215
Score = 197 bits (501), Expect = 8e-49, Method: Composition-based stats.
Identities = 76/210 (36%), Positives = 112/210 (53%), Gaps = 4/210 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
++ RK+GMT ++ G IPVTV+ C V+ +T +K+GY A+Q+G K +
Sbjct: 6 TKAILGRKIGMTQIFTDSGELIPVTVIKGGPCLVLNVKTKEKDGYDAIQLGFENCKESKL 65
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F + + P + + E RV+ D G F G+LVD+TG + G GF+
Sbjct: 66 NKPQLGIFKKLGLPPFRIIKEVRVKNPLD-YTRGQEIRVDIFQEGELVDITGKSKGHGFT 124
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR F R +HG R V K +KMAGR G +TV+NL+VV
Sbjct: 125 GHIKRWGFRRGRMSHGSKFHRRRASIGA--GGVQHVMKGQKMAGRWGNETITVQNLKVVK 182
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
VD ++ +ILVKG VPG N +++R + K
Sbjct: 183 VDKEKDIILVKGAVPGPTGN-LLIIRKAVK 211
>gi|224542238|ref|ZP_03682777.1| hypothetical protein CATMIT_01413 [Catenibacterium mitsuokai DSM
15897]
gi|224524780|gb|EEF93885.1| hypothetical protein CATMIT_01413 [Catenibacterium mitsuokai DSM
15897]
Length = 227
Score = 197 bits (501), Expect = 8e-49, Method: Composition-based stats.
Identities = 84/220 (38%), Positives = 125/220 (56%), Gaps = 8/220 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT V+ +G+ IPVTV+ V+ +T++ +GY A+QVG + + K
Sbjct: 1 MKGILGRKIGMTQVFATDGKLIPVTVIEATPNVVLQKKTVETDGYNAIQVGFEDKREKLA 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP +G + N +PK+ + EFR + VG S F G++VDVTG + GKG+
Sbjct: 61 NKPEKGVVAKANTAPKRFIKEFRFDEM-MSYEVGQTVSVDSFVAGEVVDVTGTSKGKGYQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRH HG S +HR GS G P R+ K + G+MGGN TV+NLE+V+
Sbjct: 120 GVIKRHGQHIGPKGHG-SGAHRIVGSMGPIA-PNRIAPGKNLPGQMGGNTRTVQNLEIVA 177
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
VD ++ ++LV G VPG KK + KS + GK +
Sbjct: 178 VDVEKNVLLVSGSVPGPKKGLVV-----VKSGIKANGKTN 212
>gi|261415819|ref|YP_003249502.1| 50S ribosomal protein L3 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261372275|gb|ACX75020.1| 50S ribosomal protein L3 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302326929|gb|ADL26130.1| ribosomal protein L3 [Fibrobacter succinogenes subsp. succinogenes
S85]
Length = 205
Score = 197 bits (501), Expect = 8e-49, Method: Composition-based stats.
Identities = 91/205 (44%), Positives = 123/205 (60%), Gaps = 3/205 (1%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++A+KLGMT V+ +G +PVTVL C VV H+T +K+GY AVQ+G G K + +K
Sbjct: 3 GILAKKLGMTQVFTEQGECVPVTVLEAGPCVVVCHKTEEKDGYTAVQIGFGLKKEQRANK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
G F +V+ ++ L EF V + PVG F + F + V+V+G++ G GFSG
Sbjct: 63 AEVGHFKKADVAVREHLAEFDVADLES-WPVGKEFGAADFADAKTVNVSGISKGHGFSGT 121
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
+KRH F +HG R G T PGRVF K+MAG+ G +VTVK+L+VV VD
Sbjct: 122 IKRHGFHSGPRSHGTHNM-REPGGTSAHSYPGRVFPGKRMAGQYGNKKVTVKHLQVVKVD 180
Query: 184 DKRGLILVKGCVPGAKKNSWILVRD 208
R LI V+G VPG KNS I+VR
Sbjct: 181 GDRNLIFVRGAVPGP-KNSIIVVRK 204
>gi|160947700|ref|ZP_02094867.1| hypothetical protein PEPMIC_01635 [Parvimonas micra ATCC 33270]
gi|158446834|gb|EDP23829.1| hypothetical protein PEPMIC_01635 [Parvimonas micra ATCC 33270]
Length = 208
Score = 197 bits (501), Expect = 8e-49, Method: Composition-based stats.
Identities = 78/208 (37%), Positives = 118/208 (56%), Gaps = 3/208 (1%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ +K+GMT ++ +G + VTV+ V +T++ +GY A+Q G + K K V+KP
Sbjct: 4 ILGKKIGMTQIFTEDGTVVSVTVVEAGPMFVTQVKTVETDGYNAIQCGYVDKKEKKVTKP 63
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
++G F V+V K+ + EFR+ + + G F G VDV G + GKG GA+
Sbjct: 64 LKGHFDKVSVGYKRFVREFRLNEGE-TFETGQEIKVDLFAEGDKVDVIGTSKGKGTQGAI 122
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR N+G HG S SHR G+ PGRV K +K +G+ G + TV+NL VV VD
Sbjct: 123 KRWNYGRGPEGHG-SKSHRVAGARSAGTYPGRVLKGRKASGKTGNKKSTVQNLVVVKVDV 181
Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212
++ LILVKG +PG K + +R++ K
Sbjct: 182 EKNLILVKGAIPGP-KGGLVTIREAVKR 208
>gi|300814637|ref|ZP_07094888.1| 50S ribosomal protein L3 [Peptoniphilus sp. oral taxon 836 str.
F0141]
gi|300511256|gb|EFK38505.1| 50S ribosomal protein L3 [Peptoniphilus sp. oral taxon 836 str.
F0141]
Length = 209
Score = 197 bits (501), Expect = 9e-49, Method: Composition-based stats.
Identities = 89/209 (42%), Positives = 125/209 (59%), Gaps = 3/209 (1%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ RK+GMT +++ +G PV+V+ ++ V +T + +GY A+Q+ AG K V+KP
Sbjct: 4 LIGRKIGMTQIFDEKGIVTPVSVIEVEPNIVTQKKTSENDGYSAIQISAGAVKENKVNKP 63
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+G F VS K K + D D +G F VG+ VDV G + GKG +G +
Sbjct: 64 TKGHFDKAGVSYK-KYLSEFLTDDVDSYNLGDEIKVDIFEVGEHVDVIGTSKGKGTAGII 122
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KRH FG R THG S HR G G PG+VFKN +MAG+MG RVTV+NLE+V +D
Sbjct: 123 KRHGFGRGRETHG-SKFHRMPGGMGAASYPGKVFKNHRMAGKMGNERVTVQNLEIVRIDA 181
Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+ LILVKG +PG KK S + V+++ K A
Sbjct: 182 SKNLILVKGAIPGNKK-SKVFVKETVKKA 209
>gi|119358191|ref|YP_912835.1| 50S ribosomal protein L3 [Chlorobium phaeobacteroides DSM 266]
gi|166233130|sp|A1BJ34|RL3_CHLPD RecName: Full=50S ribosomal protein L3
gi|119355540|gb|ABL66411.1| LSU ribosomal protein L3P [Chlorobium phaeobacteroides DSM 266]
Length = 209
Score = 197 bits (501), Expect = 9e-49, Method: Composition-based stats.
Identities = 83/207 (40%), Positives = 124/207 (59%), Gaps = 1/207 (0%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ +K+GMT +YN + I T++ C V + +K+GY A Q+G GE K V+KP
Sbjct: 4 ILGKKIGMTRLYNDKREAISCTIIQAGPCFVTQVKHAEKDGYDAYQIGIGERDEKKVNKP 63
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
M G + V+P K+ EF + + L G+ S F G+ ++V G++ GKGF+G +
Sbjct: 64 MLGHYKKAGVTPGYKIAEFSKSEINLELEAGAPLDLSVFKEGEKINVLGVSKGKGFAGVV 123
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KRHNFGG THG S R+ GS G DP R F+ +MAGRMGG +TVKNLE++ +
Sbjct: 124 KRHNFGGGSRTHGQSDRLRAPGSVGGSSDPSRTFRGTRMAGRMGGCNITVKNLEIIRIMP 183
Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211
+ L++VKG +PG KNS++ + + K
Sbjct: 184 ESNLLVVKGAIPGP-KNSYVKIVSTKK 209
>gi|257790717|ref|YP_003181323.1| 50S ribosomal protein L3 [Eggerthella lenta DSM 2243]
gi|317488572|ref|ZP_07947117.1| 50S ribosomal protein L3 [Eggerthella sp. 1_3_56FAA]
gi|325831933|ref|ZP_08165030.1| 50S ribosomal protein L3 [Eggerthella sp. HGA1]
gi|257474614|gb|ACV54934.1| ribosomal protein L3 [Eggerthella lenta DSM 2243]
gi|316912314|gb|EFV33878.1| 50S ribosomal protein L3 [Eggerthella sp. 1_3_56FAA]
gi|325486254|gb|EGC88706.1| 50S ribosomal protein L3 [Eggerthella sp. HGA1]
Length = 206
Score = 197 bits (501), Expect = 9e-49, Method: Composition-based stats.
Identities = 89/209 (42%), Positives = 124/209 (59%), Gaps = 3/209 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M + + +K+GMT ++N + R +PVTV+ + + +T D +GY AVQ+G G K K
Sbjct: 1 MINAIYGKKIGMTQIFNEDDRVVPVTVIQAEPNTICQVKTKDSDGYEAVQLGFGAIKEKK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KPM G F+ +P + L E RV+ VG + + F + VDVTG + GKGF
Sbjct: 61 VNKPMAGHFAKQGTAPTRYLREVRVEN-AGEYKVGDQQTVAAFAETKKVDVTGTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR+ F G HG HR+ GS G P RVFK K+ G MG + VTVKNLEVV
Sbjct: 120 AGVMKRYGFRGGPGGHGAH-FHRAPGSVGQCATPSRVFKGLKLPGHMGVDTVTVKNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
+D+++ LILVKG +PG KN + VR +
Sbjct: 179 RIDEEQNLILVKGAIPGG-KNGVVRVRMA 206
>gi|169630900|ref|YP_001704549.1| 50S ribosomal protein L3 [Mycobacterium abscessus ATCC 19977]
gi|169242867|emb|CAM63895.1| 50S ribosomal protein L3 [Mycobacterium abscessus]
Length = 205
Score = 197 bits (501), Expect = 9e-49, Method: Composition-based stats.
Identities = 84/203 (41%), Positives = 121/203 (59%), Gaps = 3/203 (1%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
MT V++ R +PVTV+ V RT +++GY AVQ+ GE + V+KP+ G F++
Sbjct: 1 MTQVFDDNNRVVPVTVVKAGPNVVTRIRTTEQDGYSAVQLAYGEISPRKVTKPVTGQFAA 60
Query: 72 VNVSPKKKLFEFRVQKDDD--LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF 129
++P++ L E R+ + VG + F+ G VDVTG + GKGF+G MKRH F
Sbjct: 61 AGINPRRHLAELRLDDEAAAAEYEVGQELTAEIFSDGAYVDVTGTSKGKGFAGTMKRHGF 120
Query: 130 GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLI 189
G A+HG HR GS G PGRVFK +M+GRMG +RVT +NL V VD + G++
Sbjct: 121 RGQGASHGAQAVHRRPGSIGGCATPGRVFKGTRMSGRMGSDRVTTQNLVVHKVDAENGVL 180
Query: 190 LVKGCVPGAKKNSWILVRDSFKS 212
L+KG +PG +K ++VR + K
Sbjct: 181 LIKGAIPG-RKGGLVVVRTAVKR 202
>gi|319760329|ref|YP_004124267.1| 50S ribosomal protein L3 [Candidatus Blochmannia vafer str. BVAF]
gi|318039043|gb|ADV33593.1| 50S ribosomal protein L3 [Candidatus Blochmannia vafer str. BVAF]
Length = 217
Score = 197 bits (501), Expect = 9e-49, Method: Composition-based stats.
Identities = 91/215 (42%), Positives = 134/215 (62%), Gaps = 2/215 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ RKLGMT ++ +G IPVT++ + V+ + L ++GY AVQV G +KV ++K
Sbjct: 3 GLIGRKLGMTRLFGEDGVSIPVTMVEVLPNHVIQIKNLKRDGYCAVQVTTGHSKVNCLNK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P G V P K L+EFRV D + +G V + F + VDVTG++ GKGFSG
Sbjct: 63 PQLGHLKKAGVKPGKGLWEFRV-NSDSTISLGDVITIEIFKNAKEVDVTGISKGKGFSGT 121
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
+KR NF A+HG S+SHR+ GS G Q PG+VFK KKMAG++G +RVTV+NL++++V+
Sbjct: 122 IKRWNFHTQDASHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGQLGNSRVTVQNLKIINVN 181
Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
++L+KG +PG ++V+ S K G
Sbjct: 182 LNDNVLLIKGAIPGTI-GEHVIVKKSIKVKFGNAG 215
>gi|86610028|ref|YP_478790.1| 50S ribosomal protein L3 [Synechococcus sp. JA-2-3B'a(2-13)]
gi|109893564|sp|Q2JIM7|RL3_SYNJB RecName: Full=50S ribosomal protein L3
gi|86558570|gb|ABD03527.1| ribosomal protein L3 [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 214
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 79/210 (37%), Positives = 120/210 (57%), Gaps = 2/210 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT +++ EG IPVTV+ C V +T +GY A+Q+G K+
Sbjct: 1 MALGILGRKVGMTQIFSPEGLAIPVTVVQAGPCTVTQIKTQATDGYNAIQLGYLPTAEKH 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+++ RG + V+ + + +G + F+ GQLVDV G +IG+GF
Sbjct: 61 LTRAQRGHLTKAGVTELLRHLREFRVDQPEAYQLGQKITVEMFSPGQLVDVAGTSIGRGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G KRH+FG +HG S +HR GS G PGRVF +MAGR+GG RVT + L++V
Sbjct: 121 AGYQKRHHFGRGPMSHG-SKNHRRPGSIGAGTTPGRVFPGMRMAGRLGGGRVTTRKLQLV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
VD +R L+++KGCVPG + + + +
Sbjct: 180 QVDPERDLLVIKGCVPGVE-GGLLEITPAK 208
>gi|291001533|ref|XP_002683333.1| 50S ribosomal protein L3 [Naegleria gruberi]
gi|284096962|gb|EFC50589.1| 50S ribosomal protein L3 [Naegleria gruberi]
Length = 449
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 131/215 (60%), Gaps = 4/215 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+GV+A+KLGM ++ R+P+TVLH+ CQVV +T +K+GY A+Q+GAG K +
Sbjct: 143 RTGVIAQKLGMIPFWDSYHARVPLTVLHIPKCQVVQVKTKEKDGYTALQLGAGSMSAKKL 202
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+ G V PK E +V + D +LPVG + +F GQ +D++G + GK F+
Sbjct: 203 TKPLLGHCQKAGVEPKHVYTEAKVTE-DAILPVGFEITARHFIPGQFIDISGRSKGKRFA 261
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR F G ATHGVS+ HRS GSTG +VFK KKMAGRMG ++T N V
Sbjct: 262 GPMKRWGFAGQPATHGVSVVHRSLGSTGTM--INKVFKGKKMAGRMGHEQITQLNYYVYM 319
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
VD + I VKG VPG +++ + D+ + + C
Sbjct: 320 VDVENNCIYVKGSVPGP-NGAYLYLNDASRKDLPC 353
>gi|284929561|ref|YP_003422083.1| 50S ribosomal protein L3P [cyanobacterium UCYN-A]
gi|284810005|gb|ADB95702.1| LSU ribosomal protein L3P [cyanobacterium UCYN-A]
Length = 212
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 85/210 (40%), Positives = 120/210 (57%), Gaps = 4/210 (1%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
M G++ KLGMT +++ G IPVTV+ + C + +T D +GY A+Q+G E K K
Sbjct: 1 MAIGLLGTKLGMTQIFDDETGAAIPVTVMKVGPCTITQIKTSDTDGYNAIQIGYSEVKEK 60
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+ KP G SP + L E+RV D +G + F G LVDVTG ++G+G
Sbjct: 61 ALVKPELGHLKKAGASPLRHLKEYRVD-DIQPYQLGETVNVDLFNTGDLVDVTGTSMGRG 119
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G KRHNF THG S SHR GSTG PGRV+ KKMAG+ G ++VT + L+V
Sbjct: 120 FAGYQKRHNFKRGNMTHG-SKSHRLPGSTGAGTTPGRVYPGKKMAGQYGASKVTTRRLKV 178
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
V +D + L+L+KG +PG + + +
Sbjct: 179 VQIDAECNLLLIKGAIPGKP-GGLLNITPA 207
>gi|159904219|ref|YP_001551563.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9211]
gi|226730549|sp|A9BCP7|RL3_PROM4 RecName: Full=50S ribosomal protein L3
gi|159889395|gb|ABX09609.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9211]
Length = 219
Score = 197 bits (501), Expect = 1e-48, Method: Composition-based stats.
Identities = 79/211 (37%), Positives = 127/211 (60%), Gaps = 3/211 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGM+ ++ +GR +PVT++ C++ ++L +GY AVQ+G G + K
Sbjct: 1 MSIGILGKKLGMSQFFDDKGRSVPVTLIEAGPCRITQLKSLATDGYSAVQIGYGFTREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP +G S + L E+RV D + +G+ + F GQ VDV+G ++G+GF
Sbjct: 61 VNKPFKGHLSKSGEGFLRHLHEYRVD-DLGVYELGAKITVGNFEAGQKVDVSGNSMGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G KRH+F +HG S +HR GSTG PGR++ K+MAGR GG ++T + L ++
Sbjct: 120 AGYQKRHSFSRGPMSHG-SKNHRQPGSTGAGTTPGRIYPGKRMAGRYGGKKITTRGLTIM 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+D R L++VKG VPG S + +R + +
Sbjct: 179 KIDSDRNLLVVKGSVPGKP-GSLLNIRPAQR 208
>gi|225158913|ref|ZP_03725227.1| ribosomal protein L3 [Opitutaceae bacterium TAV2]
gi|224802531|gb|EEG20789.1| ribosomal protein L3 [Opitutaceae bacterium TAV2]
Length = 215
Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 81/215 (37%), Positives = 119/215 (55%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M S ++ +K+GMT VY+ + +PVTV+ C VV +T + +GY AVQ+G K KN
Sbjct: 1 MISTLLGKKIGMTQVYDAQNVLVPVTVVEAGPCPVVQVKTTETDGYNAVQLGFSVKKAKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
K + + + ++ + L G V + + F GQ+VDV G+T GKGF
Sbjct: 61 TPKAEQAHAAKAGLENTPRVLGEVRLNEAPTLKAGDVVTVAAFKEGQIVDVIGITKGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G ++R G A+HG S+ HR GS G RQ PGR +KN+KM G MG + TV+NL +V
Sbjct: 121 QGVVRRFRVAGGPASHG-SMFHRRIGSIGMRQTPGRSWKNQKMPGHMGSQQRTVQNLTIV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
+ + L+LVKG +PGA ++VR + K
Sbjct: 180 KILADKNLLLVKGAIPGA-NGDDVIVRTAIKGQPK 213
>gi|149919182|ref|ZP_01907665.1| 50S ribosomal protein L3 [Plesiocystis pacifica SIR-1]
gi|149819896|gb|EDM79318.1| 50S ribosomal protein L3 [Plesiocystis pacifica SIR-1]
Length = 223
Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 102/216 (47%), Positives = 133/216 (61%), Gaps = 2/216 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT Y +G R+PVTVL V HRT++++GY A+Q+ + K +SK
Sbjct: 6 GLLTKKIGMTEFYKEDGTRVPVTVLLAKGNVVTAHRTVERDGYTALQLAFDDQKASRLSK 65
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
P G F VSPK+K+ EFRV D VGS S F+ GQLVDVTG + GKGF G
Sbjct: 66 PKLGQFKKAEVSPKRKIKEFRVAADVVAQHAVGSEVDVSIFSDGQLVDVTGTSKGKGFQG 125
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH G + THG +R GS GCR PGRV K+MAG+MG VTV+NLEV V
Sbjct: 126 VMKRHGMRGEKRTHGQHEVYRHGGSIGCRLTPGRVIPGKRMAGQMGNETVTVQNLEVAKV 185
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+GLILVKG +PG KN ++ +R + K+A+ K
Sbjct: 186 IADKGLILVKGAIPGG-KNGYVQIRHAIKAAIRTKH 220
>gi|257125036|ref|YP_003163150.1| ribosomal protein L3 [Leptotrichia buccalis C-1013-b]
gi|257048975|gb|ACV38159.1| ribosomal protein L3 [Leptotrichia buccalis C-1013-b]
Length = 208
Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 84/209 (40%), Positives = 124/209 (59%), Gaps = 4/209 (1%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ +K+GMT ++ + + IPVTV+ + +T +K GY A+ + G+ + KN +KP
Sbjct: 2 ILGKKIGMTQIF-EDEKLIPVTVIEAGTNFITQIKTEEKEGYNAITLAYGDKREKNTTKP 60
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
G F V+PK+ L EF+V D +G + VD++G + GKG +G M
Sbjct: 61 ELGIFKKAGVTPKRFLKEFKVANPAD-FALGQEIKVDVLEGIEFVDISGTSKGKGTAGVM 119
Query: 125 KRHNFGGLRATHGVSISHRSHGS-TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
KRHNFGG RA+HGVS +HR GS G V K KKMAGR+G +VTV+NL+V+ D
Sbjct: 120 KRHNFGGNRASHGVSRNHRLGGSNAGGAASNSNVPKGKKMAGRLGAEKVTVQNLQVIKFD 179
Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+ L+LVKG VPG KN +++++ S K
Sbjct: 180 VENSLLLVKGAVPGP-KNGYLVIKKSVKK 207
>gi|86132544|ref|ZP_01051137.1| 50S ribosomal protein L3 [Dokdonia donghaensis MED134]
gi|85816786|gb|EAQ37971.1| 50S ribosomal protein L3 [Dokdonia donghaensis MED134]
Length = 203
Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 77/208 (37%), Positives = 124/208 (59%), Gaps = 6/208 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT +++ G+ IP TV+ C + RT + +GY A+Q+G + K
Sbjct: 1 MSGLIGKKVGMTSIFDENGKNIPCTVIEAGPCVITQVRTKETDGYEALQLGFDDVKKA-- 58
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+K G K+K+ EF+ + + +G + +F G+ VDV+G + GKGF
Sbjct: 59 NKAATGHAKKAGTVAKRKVVEFQGFEGE--FKLGDAITVDHFAEGEFVDVSGTSKGKGFQ 116
Query: 122 GAMKRHNFG-GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH F +ATHG R+ GS G P RVFK +MAGRMGG+++ V+NL+V+
Sbjct: 117 GVVKRHGFAGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGRMGGDKIKVQNLKVL 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
V ++ L++VKGCVPG KN++++++
Sbjct: 177 KVVAEKNLLVVKGCVPG-HKNAYVIIQK 203
>gi|189095434|ref|YP_001936447.1| ribosomal protein L3 [Heterosigma akashiwo]
gi|157694777|gb|ABV66053.1| 50S ribosomal protein L3 [Heterosigma akashiwo]
gi|157778008|gb|ABV70194.1| 50S ribosomal protein L3 [Heterosigma akashiwo]
Length = 208
Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 82/209 (39%), Positives = 121/209 (57%), Gaps = 3/209 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ K+GMT +++ G +PVTV+ C V + +GY A+Q+G K+KN
Sbjct: 1 MSIGILGTKIGMTQIFDENGLAVPVTVVQSGPCIVTQIKNFSTDGYNAIQIGFLAKKIKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+K +G F+ V P++ L EF+V+ ++ +G F +GQ V+VTG +IGKGF
Sbjct: 61 TNKAEQGHFTKVGCQPQRILKEFKVESTEN-FTLGQQIKVDCFEIGQFVNVTGRSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
SG KR+NF THG S +HR GS G PGRV KKMAG+ G VT+ L+V+
Sbjct: 120 SGLQKRYNFSRGPMTHG-SKNHRLPGSIGAGTTPGRVLPGKKMAGQYGNKNVTISKLKVL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
++D K L+L+KG +PG N + + S
Sbjct: 179 NIDSKENLLLLKGAIPGKAGN-IVSIAPS 206
>gi|71083804|ref|YP_266524.1| 50S ribosomal protein L3 [Candidatus Pelagibacter ubique HTCC1062]
gi|109893535|sp|Q4FLL8|RL3_PELUB RecName: Full=50S ribosomal protein L3
gi|71062917|gb|AAZ21920.1| 50S ribosomal protein L3 [Candidatus Pelagibacter ubique HTCC1062]
Length = 236
Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 106/209 (50%), Positives = 142/209 (67%), Gaps = 2/209 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
++ +K+GMT + GR +PVTV+ ++ +V+ +K GY AVQ+G G+ K ++
Sbjct: 4 IALIGKKIGMTREFYKTGRLVPVTVIKMEKARVIQVIEEEKRGYKAVQLGFGKIKASKLT 63
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
K M+G ++ N KKKL EFRV KD +L G+ F F + VD T TIGKGF+G
Sbjct: 64 KAMKGLYAKKNTEAKKKLKEFRV-KDTELYKEGNEFGLEIFNEVKFVDTTSKTIGKGFAG 122
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
AMKRHNFGGLRATHGVS+SHRSHGSTG RQDPG+VFK KKMAG MG T++NLE++
Sbjct: 123 AMKRHNFGGLRATHGVSVSHRSHGSTGQRQDPGKVFKGKKMAGHMGDRVRTMQNLEIIKT 182
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
D + L+ +KG +PG+ KN+ ILV+ S K
Sbjct: 183 DIENELLYLKGSIPGS-KNTEILVKKSVK 210
>gi|11465780|ref|NP_053924.1| ribosomal protein L3 [Porphyra purpurea]
gi|1710474|sp|P51314|RK3_PORPU RecName: Full=50S ribosomal protein L3, chloroplastic
gi|1276780|gb|AAC08200.1| 50S ribosomal protein L3 [Porphyra purpurea]
Length = 205
Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats.
Identities = 84/208 (40%), Positives = 125/208 (60%), Gaps = 3/208 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ K+GMT ++ G IPVTV+ + C + +++ +GY A+QVG + +
Sbjct: 1 MSVGILGTKVGMTQFFDETGLSIPVTVIQVGPCVITQIKSMSTDGYNAIQVGYKQVVEQK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+SKP+ G P K L E+ V+ +D V VFS + F VGQ V+V+ +IGKGF
Sbjct: 61 LSKPLLGHLKKSQSPPLKYLREYLVESIED-FEVSQVFSTNIFEVGQKVNVSSKSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
SG KRH+F +HG S +HR GS G PGRV+ K MAG+MG +VT+KNL++V
Sbjct: 120 SGYQKRHHFSRGPMSHG-SKNHRQPGSIGAGTTPGRVYPGKNMAGQMGNKKVTIKNLQIV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
S++ + L+L+KG VPG K+ + + V
Sbjct: 179 SINIENDLLLLKGAVPG-KQGALVKVSK 205
>gi|322436546|ref|YP_004218758.1| 50S ribosomal protein L3 [Acidobacterium sp. MP5ACTX9]
gi|321164273|gb|ADW69978.1| 50S ribosomal protein L3 [Acidobacterium sp. MP5ACTX9]
Length = 242
Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats.
Identities = 74/220 (33%), Positives = 118/220 (53%), Gaps = 7/220 (3%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVKNV 61
G++ +K+GMT +++ G PVTVL C + +T+ K+GY A Q+G + K V
Sbjct: 4 VGILGKKIGMTQIFDERGDVHPVTVLKAGPCVITQLKTMAKDGYDAAQIGYVDFVKASKV 63
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRV---QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
+K M G F+ NV P + + E + +D + G F + VDV G + G+
Sbjct: 64 TKAMNGHFAKANVPPVRMIKEVAIQKASAEDAEVKAGDRILVDIFENERFVDVIGTSKGR 123
Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
GF+G ++RH FGG +HG + GS G P RVF ++M G MG ++TV+NL
Sbjct: 124 GFAGVIRRHGFGGGPKSHG--HMFQVQGSIGASSFPSRVFPGQRMPGHMGDAQITVRNLR 181
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+ ++D + LILV+G VPGA+ ++L+ + +G
Sbjct: 182 IRAIDVEDNLILVEGAVPGARDG-YVLISKAKAPPRERRG 220
>gi|313888808|ref|ZP_07822469.1| 50S ribosomal protein L3 [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845177|gb|EFR32577.1| 50S ribosomal protein L3 [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 210
Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats.
Identities = 87/207 (42%), Positives = 127/207 (61%), Gaps = 3/207 (1%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
+V +K+GMT +++ EG PV+V+ ++ VV +T++ +GY A+QV E K + ++KP
Sbjct: 4 LVGKKIGMTQIFDEEGIVTPVSVIEVEPNVVVQKKTIESDGYNAIQVATQEVKERRLNKP 63
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+G V +K L EFR D + +G F VG+ VDV G + GKG +G +
Sbjct: 64 EKGHLDKAGVGYRKHLSEFRTD-DVESYNLGDEIKVDLFEVGEHVDVVGTSKGKGTAGII 122
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KRHNFG R THG S HR G G PG+V+KN +MAG+MG RVTV+NLE+V +D
Sbjct: 123 KRHNFGRGRETHG-SKFHRMPGGMGAASYPGKVWKNHRMAGKMGNERVTVQNLEIVRIDT 181
Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211
+ LILVKG +PG KK + + ++ + K
Sbjct: 182 DKNLILVKGAIPGPKKGT-VRIKSTVK 207
>gi|308272979|emb|CBX29583.1| 50S ribosomal protein L3 [uncultured Desulfobacterium sp.]
Length = 211
Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats.
Identities = 80/213 (37%), Positives = 124/213 (58%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGMT +++ EG+ +PVTVL + C V ++ + +GY A+Q+G GE K
Sbjct: 1 MCRGLIGKKLGMTVMFSSEGKCVPVTVLKVGPCVVTQIKSNETDGYNALQIGFGEKKKTR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP++G + + + EF V+ ++ +G + + F VG LVDV+G+ G+GF
Sbjct: 61 INKPVQGHLKKGGLESCEYMREFSVENPEE-YKLGQILNIEMFNVGDLVDVSGIIKGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
SG +KRH F G R THG HR GS G P RVFK KK+ G G + T++NLE++
Sbjct: 120 SGVIKRHGFSGGRKTHGSHC-HRIPGSIGASAWPSRVFKGKKLPGHYGCCKQTMRNLEII 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
V LIL+KG VPG + +++ +
Sbjct: 179 DVRQHDNLILLKGAVPGPRSGMISVLKPNVIKK 211
>gi|291286312|ref|YP_003503128.1| 50S ribosomal protein L3 [Denitrovibrio acetiphilus DSM 12809]
gi|290883472|gb|ADD67172.1| 50S ribosomal protein L3 [Denitrovibrio acetiphilus DSM 12809]
Length = 211
Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats.
Identities = 93/215 (43%), Positives = 128/215 (59%), Gaps = 5/215 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVK 59
M ++ +K+GMT V+N +G +PVTV+ C V RT +K+GY A+Q+G E K
Sbjct: 1 MAKAIIGKKVGMTQVFNEDGTVVPVTVVLAGPCVVTEVRTEEKDGYSAIQLGFDEIVKET 60
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KPM G+F V P K L EFR + + + VG + F G LVDV G +IGKG
Sbjct: 61 RVNKPMAGYFKKQGVKPMKFLKEFRGEAGE--ITVGQQVDVNVFEEGDLVDVQGTSIGKG 118
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G MKRH F G THG S HR+ GS G + PG K +KM GRMGG +VTV+NL V
Sbjct: 119 FQGVMKRHGFAGGPKTHG-SHFHRAPGSIGMCEFPGETPKGRKMPGRMGGKKVTVQNLSV 177
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V V + L+LVKG +PG ++ + ++++ K+
Sbjct: 178 VKVIPETNLLLVKGAIPG-HDDAIVYIKEAVKAKK 211
>gi|110004229|emb|CAK98567.1| 50s ribosomal protein l3 [Spiroplasma citri]
Length = 258
Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats.
Identities = 83/211 (39%), Positives = 131/211 (62%), Gaps = 6/211 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT ++ +GR IPVTV+ ++ V+ T ++NGY A+Q+ + ++ V
Sbjct: 1 MKGILGRKIGMTQIFATDGRLIPVTVVEVEPNVVLRVLTKEQNGYQALQLAVEDKRISLV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SKP +G F N +PK+ + E R + D G + FT G+ VDVTG + GKGF+
Sbjct: 61 SKPDQGQFKKANTTPKRFVKEIR---NMDGYNPGDIIKADIFTAGEFVDVTGTSKGKGFT 117
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G++KRHN+ HG S HR GS G P R+ K+KKM G MG +VT++NLEV++
Sbjct: 118 GSIKRHNYSRGPMGHG-SGYHRGVGSMGAIA-PNRILKSKKMPGHMGTKKVTIQNLEVIA 175
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+D ++ +LVKG +PG KK +++++++ K
Sbjct: 176 IDTEKNALLVKGSIPGPKK-QFVIIKEAIKG 205
>gi|320352917|ref|YP_004194256.1| 50S ribosomal protein L3P [Desulfobulbus propionicus DSM 2032]
gi|320121419|gb|ADW16965.1| LSU ribosomal protein L3P [Desulfobulbus propionicus DSM 2032]
Length = 210
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 83/207 (40%), Positives = 117/207 (56%), Gaps = 2/207 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RKLGMT VY+ GR IPVTV+ C ++ +T++K GY A+QVG E K +
Sbjct: 4 TKGILGRKLGMTRVYDENGRSIPVTVIEAGPCTILQKKTVEKEGYNAIQVGFLEKKETRM 63
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G + EFRV D + ++G LVD++G + G+GF
Sbjct: 64 NKPEVGHCKRSGGKGFYYIKEFRVTNPDVYEVGQQITVSEIVSIGDLVDISGKSKGRGFQ 123
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRH F G R THG S HR+ GS GC P RV K KK+ GRMG +T KNL ++
Sbjct: 124 GVIKRHGFAGGRTTHG-SDFHRAPGSIGCSAWPSRVLKGKKLPGRMGNESMTQKNLRIID 182
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRD 208
+ ++ ++LV+G VPGA KN + +
Sbjct: 183 IRNEDNVLLVRGTVPGA-KNGLLNIYS 208
>gi|114778824|ref|ZP_01453631.1| 50S ribosomal protein L3 [Mariprofundus ferrooxydans PV-1]
gi|114550955|gb|EAU53519.1| 50S ribosomal protein L3 [Mariprofundus ferrooxydans PV-1]
Length = 199
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 93/202 (46%), Positives = 125/202 (61%), Gaps = 3/202 (1%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
MT ++ +G I VTVL+++ C+VV R+ DK+GY AVQVG G AK +N ++P++G ++
Sbjct: 1 MTQIFTADGSAIAVTVLNIEPCKVVARRSADKDGYDAVQVGFGAAK-RNTTRPVQGHYAR 59
Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
L EFR+ D +G + + F GQ +DV+G + G GF+G MKR+NFGG
Sbjct: 60 QGQEVAGGLKEFRI-AADAEFELGQELNATLFEAGQKIDVSGTSKGHGFAGVMKRYNFGG 118
Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
RATHG HR GSTG Q PGRVF KKM G G R T +NLEVV VD + ILV
Sbjct: 119 GRATHGAEKVHRQMGSTGQCQWPGRVFPGKKMPGHFGNVRSTTQNLEVVRVDAEANRILV 178
Query: 192 KGCVPGAKKNSWILVRDSFKSA 213
KG VPG+ +N + +R + K A
Sbjct: 179 KGAVPGS-RNGLVELRPAVKGA 199
>gi|110639535|ref|YP_679744.1| 50S ribosomal protein L3 [Cytophaga hutchinsonii ATCC 33406]
gi|123163229|sp|Q11QB2|RL3_CYTH3 RecName: Full=50S ribosomal protein L3
gi|110282216|gb|ABG60402.1| LSU ribosomal protein L3P [Cytophaga hutchinsonii ATCC 33406]
Length = 206
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 84/206 (40%), Positives = 123/206 (59%), Gaps = 3/206 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT VY+ G +P TV+ C + +T++ +GY AVQ+ + K K+
Sbjct: 1 MSGIIGKKVGMTSVYDAVGNYVPCTVIEAGPCVITQIKTVETDGYKAVQLAFDDKKEKST 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+ G F VSPK+KL EF+ +++ L S+ + F G VDV G G+GF
Sbjct: 61 TKPLLGHFKKAGVSPKRKLVEFKGFENE-LTLGQSLAAQDVFVEGDFVDVVGTAKGRGFQ 119
Query: 122 GAMKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH F G THG R GS G P RVFK +MAGRMG NRV ++NL+++
Sbjct: 120 GVVKRHGFGGVGGQTHGQHNRARHAGSIGACSFPARVFKGTRMAGRMGNNRVKIQNLQIL 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
V + L++V G VPG+ KNS++L+
Sbjct: 180 KVYPEHNLLVVSGSVPGS-KNSYVLI 204
>gi|269122979|ref|YP_003305556.1| 50S ribosomal protein L3 [Streptobacillus moniliformis DSM 12112]
gi|268314305|gb|ACZ00679.1| ribosomal protein L3 [Streptobacillus moniliformis DSM 12112]
Length = 208
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 85/209 (40%), Positives = 124/209 (59%), Gaps = 4/209 (1%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ +K+GMT ++ + IPVTV+ VV +T++K GY ++ + E + K V+KP
Sbjct: 2 ILGKKIGMTQIF-ENEKLIPVTVIEAGPNFVVQTKTVEKEGYTSITLAYDEKREKLVNKP 60
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
G F ++ KK L EF+V+ ++ +G + VD+ G++ GKG +G M
Sbjct: 61 EMGVFKKAGITAKKFLKEFKVESVEE-FALGQELKVDVLEGIEFVDIQGISKGKGTAGVM 119
Query: 125 KRHNFGGLRATHGVSISHRSHGS-TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
KRHNFGG RATHGVS +HR GS G V K KKMAGR+G VTV+NL+VV D
Sbjct: 120 KRHNFGGNRATHGVSRNHRLGGSNAGGAASNSNVPKGKKMAGRLGNENVTVQNLKVVKFD 179
Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+ L+LVKG VPG KN +++++ S K
Sbjct: 180 VENNLLLVKGAVPGP-KNGYLVIKKSIKK 207
>gi|313680515|ref|YP_004058254.1| LSU ribosomal protein l3p [Oceanithermus profundus DSM 14977]
gi|313153230|gb|ADR37081.1| LSU ribosomal protein L3P [Oceanithermus profundus DSM 14977]
Length = 208
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 86/212 (40%), Positives = 124/212 (58%), Gaps = 7/212 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ K+GMT ++ R IPVTV+ C VV ++ +++GY AVQ+G + K V
Sbjct: 1 MKGILGAKVGMTQIW-KNDRAIPVTVVLAGPCPVVQRKSPERDGYAAVQLGFVPLEPKRV 59
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KPM+G F+ + P + L E R + + G V + F G VDVTG + G+G +
Sbjct: 60 NKPMKGHFAKFSAEPVRYLREIRDFEPE-----GDVVTVEIFQPGDKVDVTGTSKGRGTA 114
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR NF G A+HG HR GS G R+ PGRV+K KKMAG G R+TV+NLEVV
Sbjct: 115 GVMKRWNFAGGPASHGAHRIHRHGGSIGQRKAPGRVYKGKKMAGHYGAERITVQNLEVVE 174
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
V + L+L+KG +PG ++VR++ +
Sbjct: 175 VIPEENLLLIKGAIPGP-NGGLVVVRETTRDK 205
>gi|78186070|ref|YP_374113.1| 50S ribosomal protein L3 [Chlorobium luteolum DSM 273]
gi|109893534|sp|Q3B6G1|RL3_PELLD RecName: Full=50S ribosomal protein L3
gi|78165972|gb|ABB23070.1| LSU ribosomal protein L3P [Chlorobium luteolum DSM 273]
Length = 209
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 88/207 (42%), Positives = 123/207 (59%), Gaps = 1/207 (0%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ +K+GMT +YN + +P T++ C V + +K+GY AVQ+G GE K V+KP
Sbjct: 4 ILGKKIGMTRLYNDKREAVPCTIIQAGPCFVTQVKNAEKDGYDAVQIGIGERKEHKVTKP 63
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
M G + V+P + EF D L GS S F G++V+V G++ GKGF+G +
Sbjct: 64 MLGHYKKAGVTPGYMMAEFDASMFDVELAAGSPVSVESFKEGEIVNVLGVSKGKGFAGVV 123
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KRHNFGG THG S R+ GS G DP R FK +M GRMG + VTV+NL+VV +
Sbjct: 124 KRHNFGGGSRTHGQSDRLRAPGSVGGSSDPSRTFKGTRMGGRMGSDNVTVRNLQVVKIMA 183
Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211
+ LI+VKG VPG KNS++ + K
Sbjct: 184 ESNLIMVKGSVPGP-KNSYVKIVSIKK 209
>gi|325104868|ref|YP_004274522.1| LSU ribosomal protein L3P [Pedobacter saltans DSM 12145]
gi|324973716|gb|ADY52700.1| LSU ribosomal protein L3P [Pedobacter saltans DSM 12145]
Length = 205
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 83/206 (40%), Positives = 125/206 (60%), Gaps = 4/206 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT +++ EG+ IP TV+ C V +T++ +GY AVQ+ E K KN
Sbjct: 1 MSGIIGKKVGMTSIFDAEGKNIPCTVIEAGPCVVTQVKTVETDGYAAVQLAYDEKKEKNT 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+ ++G F+ +PK+K+ EF+ + + L G V + F G VDV G + GKGF
Sbjct: 61 TAALKGHFAKAGTAPKRKMVEFKYFEVEKTL--GEVVDVTLFEEGDYVDVVGTSKGKGFQ 118
Query: 122 GAMKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH F G THG R+ GS G P RVFK +MAGR GG+RV ++NL++V
Sbjct: 119 GVVKRHGFGGVGMQTHGQHNRMRAPGSLGASSFPSRVFKGMRMAGRTGGSRVKIQNLQIV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
V ++ L++V G +PGA K S++L+
Sbjct: 179 KVFAEQNLLVVSGSIPGA-KGSYVLI 203
>gi|304438907|ref|ZP_07398830.1| 50S ribosomal protein L3 [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304372573|gb|EFM26156.1| 50S ribosomal protein L3 [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 210
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 87/207 (42%), Positives = 124/207 (59%), Gaps = 3/207 (1%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ +K+GMT +++ G PVTV+ VV ++++ +GY AVQV +G+ K+ V+KP
Sbjct: 4 LIGKKVGMTQLFDENGTVTPVTVIQAMPNVVVQKKSVETDGYNAVQVASGDVKLNRVNKP 63
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+G F NV PKK L EF+ D +G + + F+ G VDV G + GKG G +
Sbjct: 64 TKGHFEKANVEPKKYLNEFKTDDLDS-YEIGKELNVTIFSEGDFVDVVGTSKGKGTQGVV 122
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
RH FG R THG S HR G G PG+V+KN +MAG+ G RVTV+NL VV VD+
Sbjct: 123 TRHGFGRGRETHG-SKFHRMPGGMGAATYPGKVWKNHRMAGKTGNERVTVQNLLVVRVDE 181
Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211
+R LI VKG +PG K + V+++ K
Sbjct: 182 ERNLIFVKGSIPGP-KRGKVTVKETVK 207
>gi|323340374|ref|ZP_08080631.1| 50S ribosomal protein L3 [Lactobacillus ruminis ATCC 25644]
gi|323092150|gb|EFZ34765.1| 50S ribosomal protein L3 [Lactobacillus ruminis ATCC 25644]
Length = 206
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 78/210 (37%), Positives = 118/210 (56%), Gaps = 6/210 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT V+ G +PVTV+ + V+ +T++ +GY A+Q+G + + NV
Sbjct: 3 TKGILGKKVGMTQVFTENGELVPVTVVEVGTNVVLQVKTVENDGYNAIQLGFDDQRAVNV 62
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP +G +PK+ + E R + D VG F G +VDVTG + G GF
Sbjct: 63 NKPAKGHADKAKTAPKRFVREIRDVQGD--YKVGDEVKADLFEAGDIVDVTGTSKGHGFQ 120
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR HG S HR GS G RV K K + GRMGG RVT++NL++V
Sbjct: 121 GNIKRWGQSRGPMAHG-SRYHRRPGSMGVI--INRVMKGKMLPGRMGGKRVTIQNLDIVK 177
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
D + G++L+KG VPGA K S++ ++ + K
Sbjct: 178 ADMENGVLLIKGNVPGANK-SYVTIKSTVK 206
>gi|91763160|ref|ZP_01265124.1| 50S ribosomal protein L3 [Candidatus Pelagibacter ubique HTCC1002]
gi|91717573|gb|EAS84224.1| 50S ribosomal protein L3 [Candidatus Pelagibacter ubique HTCC1002]
Length = 236
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 108/209 (51%), Positives = 143/209 (68%), Gaps = 2/209 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
+V +K+GMT + GR +PVTV+ ++ +V+ +K GY AVQ+G G+ K ++
Sbjct: 4 IALVGKKIGMTREFYKTGRLVPVTVIKMEKARVIQVIEEEKRGYKAVQLGFGKIKASKLT 63
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
K M+GF++ N KKKL EFRV KD +L G+ F F + VD T TIGKGF+G
Sbjct: 64 KAMKGFYAKKNTEAKKKLKEFRV-KDTELYKEGNEFGLEIFNEVKFVDTTSKTIGKGFAG 122
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
AMKRHNFGGLRATHGVS+SHRSHGSTG RQDPG+VFK KKMAG MG T++NLE++
Sbjct: 123 AMKRHNFGGLRATHGVSVSHRSHGSTGQRQDPGKVFKGKKMAGHMGDRVRTMQNLEIIKT 182
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
D + L+ +KG +PG+ KN+ ILV+ S K
Sbjct: 183 DIENELLYLKGSIPGS-KNTEILVKKSVK 210
>gi|149179414|ref|ZP_01857968.1| 50S ribosomal protein L3 [Planctomyces maris DSM 8797]
gi|148841725|gb|EDL56134.1| 50S ribosomal protein L3 [Planctomyces maris DSM 8797]
Length = 229
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 88/230 (38%), Positives = 126/230 (54%), Gaps = 21/230 (9%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT +Y+ +G +PVTV+ C V+ RTLD +GY AVQVG + +
Sbjct: 1 MPVGLLGKKVGMTQIYD-DGVMVPVTVIQAGPCHVLQVRTLDTDGYEAVQVGFEDKPRRL 59
Query: 61 VSKPMRGFFS-------------------SVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS 101
++ RG + PK+ + EFR +D VG + S
Sbjct: 60 AARSERGHVAALDSKRQKKRAESGVAVVDKAGCEPKRFVKEFRTDGEDHGCEVGGELTVS 119
Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
F +DV G + G+GF+G MKRHNF G RATHGV HR GS G DP RV K
Sbjct: 120 VFADVPFIDVIGTSKGRGFAGVMKRHNFSGQRATHGVKRVHRHGGSIGMSADPSRVLKGT 179
Query: 162 KMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+M GR GG ++TV++L+VV VD++ G++LV+G VPG + +R + K
Sbjct: 180 RMGGRYGGKQITVRHLKVVRVDEENGVLLVRGAVPGPNGGDLV-IRHTNK 228
>gi|223983921|ref|ZP_03634081.1| hypothetical protein HOLDEFILI_01362 [Holdemania filiformis DSM
12042]
gi|223964113|gb|EEF68465.1| hypothetical protein HOLDEFILI_01362 [Holdemania filiformis DSM
12042]
Length = 230
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 76/223 (34%), Positives = 120/223 (53%), Gaps = 5/223 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RKLGMT V+ +G IPVTV+ V+ +TL+ +GY AVQ+G + K
Sbjct: 1 MKGILGRKLGMTQVFTTDGVLIPVTVVEALPNVVLQKKTLENDGYEAVQLGFEDLSEKGS 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+K +G + + + K+ + E R + +L F G++VDVTG + G+G++
Sbjct: 61 NKAEKGHAAKASTAAKRFVREIRGTEMTNLEVGNE-VKVDLFAAGEIVDVTGTSKGRGYN 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQ-DPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G + R+N THG S + R GS + GR+ K AG+ GG T +NLE++
Sbjct: 120 GTIVRNNATMGPKTHGGSKNMRHIGSLATTGRNNGRIEKGTAGAGQEGGYTTTTQNLEII 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK--SAVNCKGKVS 221
VD + +L+KG VPG K ++V+ S K +AV+ K +S
Sbjct: 180 KVDVENNYMLIKGNVPGP-KRGLVVVKSSVKGTAAVSAKDLIS 221
>gi|118579119|ref|YP_900369.1| 50S ribosomal protein L3 [Pelobacter propionicus DSM 2379]
gi|166233173|sp|A1ALU1|RL3_PELPD RecName: Full=50S ribosomal protein L3
gi|118501829|gb|ABK98311.1| LSU ribosomal protein L3P [Pelobacter propionicus DSM 2379]
Length = 209
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 85/201 (42%), Positives = 120/201 (59%), Gaps = 3/201 (1%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
MT ++ +G R+PVTV+ C V +T +GY AVQVG N SKPM G +
Sbjct: 12 MTQIFTEDGTRVPVTVIQAGPCVVTQKKTASIDGYSAVQVGFDSTPAANASKPMLGHCTK 71
Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
+ L EF+ + +G V + FT G VDVTG +IGKGF G +KR+NF G
Sbjct: 72 SGQGVFRYLREFKFDA-ASEMNLGDVLTVEQFTAGDFVDVTGTSIGKGFQGVIKRYNFRG 130
Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
RA+HG S HR+ GS G P RVFKNKKM G++G +VT++ L+V+ VD L+L+
Sbjct: 131 GRASHG-SRFHRAPGSIGASATPSRVFKNKKMPGQLGNTQVTMQCLQVIRVDADDNLLLI 189
Query: 192 KGCVPGAKKNSWILVRDSFKS 212
KG +PG +N+ +L+++S K+
Sbjct: 190 KGAIPG-HRNNIVLIKNSVKA 209
>gi|311748514|ref|ZP_07722299.1| 50S ribosomal protein L3 [Algoriphagus sp. PR1]
gi|126577030|gb|EAZ81278.1| 50S ribosomal protein L3 [Algoriphagus sp. PR1]
Length = 210
Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats.
Identities = 82/209 (39%), Positives = 120/209 (57%), Gaps = 5/209 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT +++ +GR + T++ C V + ++ +GY AVQ+ GE K KN
Sbjct: 1 MSGIIGKKVGMTSIFSADGRNVACTLIEAGPCVVTQVKNVETDGYNAVQLAYGERKEKNT 60
Query: 62 SKPMRGFFSSVNVSPKKK---LFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
KP+ G F +PK+K EFRV+ + + +V S F G VD G + GK
Sbjct: 61 PKPLIGHFKKAGTTPKQKVVEFREFRVEFEGQVDLGATVKSSEVFVEGDFVDAIGTSKGK 120
Query: 119 GFSGAMKRHNFG-GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
GF G +KRH F +THG R GS G P RVFK +MAGR GG+RV V NL
Sbjct: 121 GFQGVVKRHGFAGVGGSTHGQHNRQRHPGSIGACSWPSRVFKGMRMAGRTGGDRVKVINL 180
Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILV 206
+V+ + ++ L+LV G VPG KNS++++
Sbjct: 181 KVLKIYPEQNLLLVSGSVPGP-KNSFVIL 208
>gi|116493163|ref|YP_804898.1| 50S ribosomal protein L3P [Pediococcus pentosaceus ATCC 25745]
gi|122265373|sp|Q03EB6|RL3_PEDPA RecName: Full=50S ribosomal protein L3
gi|116103313|gb|ABJ68456.1| LSU ribosomal protein L3P [Pediococcus pentosaceus ATCC 25745]
Length = 210
Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats.
Identities = 79/213 (37%), Positives = 121/213 (56%), Gaps = 5/213 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT V+ G IPVTV+ V+ +T++ +GY +VQ+G + +
Sbjct: 3 TKGILGKKVGMTQVFTEAGELIPVTVIDTTPNVVLQLKTVENDGYSSVQLGFDDKRQVLS 62
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP +G + N +PK+ + E R + D + VG + F G++VDVTG T G GF
Sbjct: 63 NKPEQGHVAKANTNPKRFIHEIRNVELGD-VKVGDTIAADIFEAGEIVDVTGTTKGHGFQ 121
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +K+ HG S HR GS G RVF KK+ GRMG VT+++LE+V
Sbjct: 122 GVIKKDGQRRGPMAHG-SRYHRRPGSLGAV--INRVFPGKKLPGRMGNKTVTIQHLEIVK 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
D + ++LVKG VPGAKK S+++V+ + K+
Sbjct: 179 ADTENNVLLVKGNVPGAKK-SYLVVKSTVKNTK 210
>gi|225560374|gb|EEH08655.1| 50S ribosomal protein L3 [Ajellomyces capsulatus G186AR]
Length = 301
Score = 195 bits (497), Expect = 2e-48, Method: Composition-based stats.
Identities = 91/218 (41%), Positives = 139/218 (63%), Gaps = 3/218 (1%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
+R+G +A K GMT +++ G+RIP T+L LD QV+ H+TL KNGY AVQ+G G +
Sbjct: 71 LRTGTLAIKKGMTAIFDLETGKRIPCTILQLDRVQVISHKTLRKNGYYAVQIGCGWKHER 130
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V++PM G F++ V+PK+ + EFRV+ ++ LLP+G + + ++F GQ VD + G G
Sbjct: 131 AVTRPMLGHFAANGVAPKRHIHEFRVKDENGLLPIGEMINANWFQEGQYVDARSNSRGMG 190
Query: 120 FSGAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
F+G MKRH F G +HGVS++HR S + RV+ KKMAG MG +VT++NL+
Sbjct: 191 FAGVMKRHGFHGQDRSHGVSLTHRSMGSSGPGQGGGSRVYPGKKMAGNMGNKQVTLQNLK 250
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
V+ VD ++G+++V G V G K + ++D+ K
Sbjct: 251 VLKVDAEKGIVVVNGSVSGP-KGCIVKLQDALKKPWPT 287
>gi|312130549|ref|YP_003997889.1| lsu ribosomal protein l3p [Leadbetterella byssophila DSM 17132]
gi|311907095|gb|ADQ17536.1| LSU ribosomal protein L3P [Leadbetterella byssophila DSM 17132]
Length = 205
Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 84/208 (40%), Positives = 123/208 (59%), Gaps = 4/208 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT ++N G +P TV+ C V RT + +GY A+Q+G GE K K
Sbjct: 1 MSGIIGKKIGMTTIFN-NGAAVPCTVIEAGPCVVTQVRTEETDGYNAIQLGFGEKKEKRT 59
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+K + G F N +PK+KL EF+ + + L ++ F G+ VDV+G T GKGF
Sbjct: 60 TKALLGHFKKANTTPKRKLVEFKEFEKEFAL-GDTIKVEDVFVEGEFVDVSGNTKGKGFQ 118
Query: 122 GAMKRHNFG-GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH FG ++THG R+ GS G P RVFK +MAGRMG +VT++NL+V+
Sbjct: 119 GVVKRHGFGGVGQSTHGQHNRLRAPGSIGACSYPARVFKGLRMAGRMGNTKVTIQNLQVL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
+ ++ LI+V G VPG KN + +
Sbjct: 179 KLFPEKNLIIVSGSVPGG-KNGIVTLHK 205
>gi|11467343|ref|NP_043200.1| ribosomal protein L3 [Cyanophora paradoxa]
gi|132953|sp|P15766|RK3_CYAPA RecName: Full=50S ribosomal protein L3, cyanelle
gi|1016144|gb|AAA81231.1| ribosomal protein L3 [Cyanophora paradoxa]
gi|13513069|emb|CAC35457.1| L3 ribosomal protein [Cyanophora paradoxa]
Length = 209
Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 78/211 (36%), Positives = 117/211 (55%), Gaps = 3/211 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ KLGMT +++ G IPVT++ C + +T +GY A+QVG E K KN
Sbjct: 1 MSIGILGTKLGMTQIFDEAGNAIPVTIIQAGPCPITQIKTTATDGYNAIQVGYRETKEKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++K G N S + L EF ++ D + V + F +V++ G +IG+GF
Sbjct: 61 LTKAQLGHLQKTNNSALRVLQEFSIESSDS-IEVEKPITVELFNDNDIVNIQGYSIGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
SG KRHNF +HG S +HR GS G PGRV+ +MAGR G +++T++ L++V
Sbjct: 120 SGYQKRHNFARGPMSHG-SKNHRLPGSIGAGSTPGRVYPGTRMAGRKGDSKITIRGLKIV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
VD +R L++VKG VPG + + K
Sbjct: 179 KVDSERSLLIVKGSVPGKP-GGLLTITQVKK 208
>gi|294507051|ref|YP_003571109.1| 50S ribosomal protein L3 [Salinibacter ruber M8]
gi|294343379|emb|CBH24157.1| 50S ribosomal protein L3 [Salinibacter ruber M8]
Length = 208
Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 79/200 (39%), Positives = 107/200 (53%), Gaps = 2/200 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M SG++ +K+GMT V++ EG + TV+ V ++ ++GY AVQ+G K KN
Sbjct: 1 MSSGLIGKKVGMTSVFDDEGNNVACTVVEAGPNVVTQVKSEGRDGYSAVQLGFDNVKEKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V++ M G F PK+ L EFR DD L F + +DV G++ GKGF
Sbjct: 61 VTQAMLGHFEKAGCPPKRMLSEFRDFGDDVDLGDVVRVE-DLFQEDERIDVVGVSKGKGF 119
Query: 121 SGAMKRHNFG-GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
G +KRH F THG S R GS G DP RVFK +MAG+ GG R ++NL V
Sbjct: 120 QGVVKRHGFSGVGMMTHGQSDRQRHPGSIGASADPSRVFKGVRMAGQTGGERTKIQNLRV 179
Query: 180 VSVDDKRGLILVKGCVPGAK 199
V + + IL+ G VPG K
Sbjct: 180 VRILADQNAILIHGSVPGPK 199
>gi|81429377|ref|YP_396378.1| 50S ribosomal protein L3 [Lactobacillus sakei subsp. sakei 23K]
gi|109893434|sp|Q38UR2|RL3_LACSS RecName: Full=50S ribosomal protein L3
gi|78611020|emb|CAI56072.1| 50S ribosomal protein L3 [Lactobacillus sakei subsp. sakei 23K]
Length = 210
Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 85/211 (40%), Positives = 119/211 (56%), Gaps = 5/211 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+QVG + +
Sbjct: 3 TKGILGRKVGMTQVFTENGELIPVTVIAATPNVVLQVKTNETDGYEAIQVGFEDKREVLS 62
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP +G + N +PK+ + EFR D VG+ F G +VDVTG+T G GF
Sbjct: 63 NKPAKGHVAKANTTPKRFIREFRDVALGD-YEVGTEIKVDTFAAGDVVDVTGVTKGHGFQ 121
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +K+ HG S HR GS G RVFK K + GRMG N+ TV+NL VVS
Sbjct: 122 GNIKKDGQSRGPMGHG-SRYHRRPGSMGAV--INRVFKGKLLPGRMGNNQRTVQNLVVVS 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
D ++ +ILVKG VPGA KNS + ++ + K+
Sbjct: 179 TDVEKNVILVKGNVPGA-KNSMVTIKTAVKA 208
>gi|196003476|ref|XP_002111605.1| hypothetical protein TRIADDRAFT_3973 [Trichoplax adhaerens]
gi|190585504|gb|EDV25572.1| hypothetical protein TRIADDRAFT_3973 [Trichoplax adhaerens]
Length = 250
Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 92/210 (43%), Positives = 136/210 (64%), Gaps = 3/210 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEA-KVKN 60
R+G++ KLGM ++ +G R+PVT++ + C V+ ++T K+GY AVQVGA + K+
Sbjct: 14 RTGLIGVKLGMMPMWMKDGTRVPVTLIKIQQCHVLHNKTKAKDGYCAVQVGAVDRLKLLY 73
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V + G F+ V+PK+K++EF+V DD L+ G++ +F GQ VDV TIGKGF
Sbjct: 74 VRRAQLGHFARAGVNPKRKVWEFKVS-DDALILRGTLLHAMHFVPGQYVDVKAKTIGKGF 132
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G MK+H G ATHGVS++HR G+TG Q+PGR++ KKMAGRMG T KNL ++
Sbjct: 133 QGVMKKHGMKGQPATHGVSLTHRKMGATGGGQEPGRIWPGKKMAGRMGNKYHTTKNLRIL 192
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
++ K ++ VKG VPG +N +I + D+
Sbjct: 193 RINTKYDILYVKGAVPG-HENQFIRITDAI 221
>gi|225849548|ref|YP_002729713.1| 50S ribosomal protein L3 [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644163|gb|ACN99213.1| 50S ribosomal protein L3 [Sulfurihydrogenibium azorense Az-Fu1]
Length = 228
Score = 195 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 89/227 (39%), Positives = 131/227 (57%), Gaps = 9/227 (3%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ + G+ +PVTV+ C V R+ DK+GY AV + GE K KN
Sbjct: 1 MPKGIIGKKIGMTRIF-VNGKAVPVTVVQAGPCYVTYLRSKDKDGYEAVALAFGERKEKN 59
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
KP+ F N+ P K + EF +++ + L + F G LVDVTG + G+GF
Sbjct: 60 TPKPLLAIFKKANIKPAKVIKEFPLKEGETLELGQEIRVEQVFEKGDLVDVTGKSKGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+ MKR +F G +HG HR+ GS GCR +PGRV+K K+MAG G VTV LEVV
Sbjct: 120 TSVMKRWDFAGFPKSHG-HRYHRAVGSIGCRTEPGRVWKTKRMAGHYGNETVTVLGLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF-----KSAVN-CKGKVS 221
+ ++ +IL+KG +PGA NS + +++S K + K K +
Sbjct: 179 DIIPEKNVILLKGSIPGAP-NSTVFLKNSVIADRRKGKLKLAKSKAA 224
>gi|226356897|ref|YP_002786637.1| 50S ribosomal protein L3 [Deinococcus deserti VCD115]
gi|226318887|gb|ACO46883.1| putative 50S ribosomal protein L3 [Deinococcus deserti VCD115]
Length = 206
Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats.
Identities = 91/213 (42%), Positives = 120/213 (56%), Gaps = 7/213 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ K+GMT ++ + R +PVTV+ C VV +T +GY AVQ+G K V
Sbjct: 1 MKGILGTKVGMTQIWKGD-RAVPVTVVLAGPCPVVQRKTSVSDGYEAVQIGFAPKSEKRV 59
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
++P G F VSP + L EFR D G S F G+ +D TG + GKGF
Sbjct: 60 NRPAAGHFKKYGVSPVRFLREFRNFNPD-----GDTVSVDIFAEGEKIDATGTSKGKGFQ 114
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR NF G A+HG HR GS G R+ PGRV+K K+MAG MG +R+TV+NLEVV
Sbjct: 115 GVMKRWNFKGGPASHGSKKWHRRPGSIGQRKTPGRVYKGKRMAGHMGMDRITVQNLEVVE 174
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V LILVKG +PGA +++R + K
Sbjct: 175 VRADENLILVKGAIPGA-NGGLVVLRQAAKGGK 206
>gi|319789238|ref|YP_004150871.1| 50S ribosomal protein L3 [Thermovibrio ammonificans HB-1]
gi|317113740|gb|ADU96230.1| 50S ribosomal protein L3 [Thermovibrio ammonificans HB-1]
Length = 207
Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats.
Identities = 85/208 (40%), Positives = 120/208 (57%), Gaps = 5/208 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK--VK 59
G++ RK+GMT V+ +G+ I VTV+ C VV +T +++GY A+Q+G E
Sbjct: 1 MKGILGRKVGMTQVFTEDGKAIAVTVIEAGPCTVVQKKTPERDGYSALQLGFIEKNKAES 60
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
KP+ G F + P + L E + ++ VG + F G+ VDVTG + G+G
Sbjct: 61 KFPKPLLGHFKKAGIKPTRWLKEVKFDNVEE-YAVGDKITVDIFKPGEKVDVTGTSKGRG 119
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G KRH FGG R +HG S H GS G DPGRV K K+MAG G VTVKNLE+
Sbjct: 120 FAGYHKRHGFGGGRRSHG-SDFHEGPGSIGACADPGRVHKGKRMAGHYGNETVTVKNLEI 178
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVR 207
V V ++ L+L+KG +PG K S ++V+
Sbjct: 179 VDVIPEKNLLLIKGAIPG-HKGSLVIVK 205
>gi|83816242|ref|YP_445167.1| 50S ribosomal protein L3 [Salinibacter ruber DSM 13855]
gi|109893553|sp|Q2S3R4|RL3_SALRD RecName: Full=50S ribosomal protein L3
gi|83757636|gb|ABC45749.1| ribosomal protein L3 [Salinibacter ruber DSM 13855]
Length = 208
Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats.
Identities = 79/200 (39%), Positives = 107/200 (53%), Gaps = 2/200 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M SG++ +K+GMT V++ EG + TV+ V ++ ++GY AVQ+G K KN
Sbjct: 1 MSSGLIGKKVGMTSVFDDEGNNVACTVVEAGPNVVTQVKSEGRDGYSAVQLGFDNVKEKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V++ M G F PK+ L EFR DD L F + +DV G++ GKGF
Sbjct: 61 VTQAMLGHFEKAGCPPKRMLSEFRDFGDDVDLGDVVRVQ-DLFQEDERIDVVGVSKGKGF 119
Query: 121 SGAMKRHNFG-GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
G +KRH F THG S R GS G DP RVFK +MAG+ GG R ++NL V
Sbjct: 120 QGVVKRHGFSGVGMMTHGQSDRQRHPGSIGASADPSRVFKGVRMAGQTGGERTKIQNLRV 179
Query: 180 VSVDDKRGLILVKGCVPGAK 199
V + + IL+ G VPG K
Sbjct: 180 VRILADQNAILIHGSVPGPK 199
>gi|212697253|ref|ZP_03305381.1| hypothetical protein ANHYDRO_01821 [Anaerococcus hydrogenalis DSM
7454]
gi|325848888|ref|ZP_08170398.1| 50S ribosomal protein L3 [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|212675702|gb|EEB35309.1| hypothetical protein ANHYDRO_01821 [Anaerococcus hydrogenalis DSM
7454]
gi|325480532|gb|EGC83594.1| 50S ribosomal protein L3 [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 209
Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats.
Identities = 89/208 (42%), Positives = 122/208 (58%), Gaps = 3/208 (1%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
+ K+GMT V + +G PVTVL D +V ++ + +GY ++QVG + K KNV KP
Sbjct: 4 IFTTKVGMTQVIDEDGVVTPVTVLKADENVIVQVKSEEVDGYNSIQVGYYDKKEKNVKKP 63
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+RG F N S K+ L E R+ + L G S F G+LVD+ + GKG GA+
Sbjct: 64 IRGHFDKANASYKRYLKEVRLSEK-SELNPGDTLSVDQFEEGELVDIVATSKGKGTQGAI 122
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR N+G A+HG S SHR G+ DP RVFK +K +G+MG RVTV+NL+VV V+
Sbjct: 123 KRWNYGRGPASHG-SKSHRVAGARAAGSDPARVFKGRKGSGKMGNERVTVQNLKVVKVNT 181
Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212
+ ILVKG VPG K + V+ + KS
Sbjct: 182 EDSYILVKGAVPGP-KGGLVQVKQAIKS 208
>gi|301168458|emb|CBW28048.1| 50S ribosomal protein L3 [Bacteriovorax marinus SJ]
Length = 232
Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats.
Identities = 87/208 (41%), Positives = 121/208 (58%), Gaps = 2/208 (0%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
K GMT +++ G +PVTV+ L V +T++ +GY A QVG GE + K V KP
Sbjct: 27 FFGVKAGMTRIFDENGNHVPVTVVKLIPNIVTQVKTVETDGYEAYQVGYGEKREKLVKKP 86
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+G NVS F + +G S + FT VDVTG+T GKGF G M
Sbjct: 87 TKGHLKKANVSANLTKFAEIKNETVSTDDLGKELSVANFTPETYVDVTGVTKGKGFQGVM 146
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR+NF G A+HG S HR++GS G R PGRVFK KKM G MG + TV+N++VV V+
Sbjct: 147 KRYNFAGGPASHG-SHFHRTNGSIGNRATPGRVFKLKKMPGHMGAVKQTVQNVKVVEVNT 205
Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212
++G +L+KG +PG+ KN ++ + + K
Sbjct: 206 EKGYMLIKGSLPGS-KNGFVKIAKALKK 232
>gi|33241161|ref|NP_876103.1| 50S ribosomal protein L3 [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
gi|42559600|sp|Q7V9W2|RL3_PROMA RecName: Full=50S ribosomal protein L3
gi|33238691|gb|AAQ00756.1| Ribosomal protein L3 [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
Length = 219
Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats.
Identities = 75/210 (35%), Positives = 123/210 (58%), Gaps = 3/210 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGM+ ++ +GR IPVT++ C++ ++ +GY AVQ+ G + K
Sbjct: 1 MSIGILGKKLGMSQFFDEKGRSIPVTLVEAGPCRITQLKSSATDGYSAVQIAFGAVREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP +G + + + E+RV KD +G+ + F GQ VDV+G ++G+GF
Sbjct: 61 INKPFQGHLAKSGDDLLRYMSEYRV-KDVGEFQLGAQITVGDFEEGQKVDVSGTSMGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
SG KRH F +HG S +HR GSTG PGR++ K+MAGR GG ++T + L ++
Sbjct: 120 SGYQKRHGFSRGPMSHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKKITTRGLMIM 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
VD + L+++KG +PG S + +R +
Sbjct: 179 KVDSDKNLLVIKGSLPGKP-GSLLNIRPAK 207
>gi|159039834|ref|YP_001539087.1| ribosomal protein L3 [Salinispora arenicola CNS-205]
gi|212288411|sp|A8M529|RL3_SALAI RecName: Full=50S ribosomal protein L3
gi|157918669|gb|ABW00097.1| ribosomal protein L3 [Salinispora arenicola CNS-205]
Length = 219
Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats.
Identities = 93/205 (45%), Positives = 125/205 (60%), Gaps = 3/205 (1%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT V++ R +PVTV+ C V R+ K+GY AVQ+ G + V
Sbjct: 6 KGILGAKLGMTQVWD-NNRVVPVTVVQAGPCVVSQVRSHQKDGYAAVQLAYGAIDPRKVK 64
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP+ G ++ +V+P++ + E R D +G + F G VDVTG T GKG++G
Sbjct: 65 KPISGHYTKADVAPRRHIVELRTT-DAAEYSLGQEVTVEQFPAGISVDVTGKTKGKGYAG 123
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F GLRA+HGV HRS GS G PGRVFK +MAGRMGG R TV+NL V +V
Sbjct: 124 PMKRHGFHGLRASHGVERKHRSPGSIGGCATPGRVFKGTRMAGRMGGVRYTVQNLTVQAV 183
Query: 183 DDKRGLILVKGCVPGAKKNSWILVR 207
D + L+LV+G +PG K + +LVR
Sbjct: 184 DTENNLLLVRGAIPGP-KGALVLVR 207
>gi|237755896|ref|ZP_04584489.1| 50S ribosomal protein L3 [Sulfurihydrogenibium yellowstonense SS-5]
gi|237691946|gb|EEP60961.1| 50S ribosomal protein L3 [Sulfurihydrogenibium yellowstonense SS-5]
Length = 226
Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats.
Identities = 93/220 (42%), Positives = 131/220 (59%), Gaps = 4/220 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT V+ + G+ IPVTV+ C VV RT +K+GY AV + GE K KN
Sbjct: 1 MPKGIIGKKIGMTRVF-VNGKAIPVTVIQAGPCNVVYTRTQEKDGYNAVALAFGERKEKN 59
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
KP+ F N+ P K + EF ++ + + + + F G LVD+TG + G+GF
Sbjct: 60 TPKPLLAIFKKANIKPAKVIKEFPLKDGETVELGQEIRIENVFEKGDLVDITGKSKGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+ MKR +F G +HG HR+ GS GCR +PGRV+K K+MAG G VTV LEVV
Sbjct: 120 TSVMKRWDFAGFPKSHG-HRYHRAVGSIGCRTEPGRVWKTKRMAGHYGNETVTVLGLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
+ ++ +ILVKG VPGA NS + ++ S A KGK+
Sbjct: 179 DIIPEKNVILVKGSVPGAP-NSIVFLKQSV-IANRRKGKL 216
>gi|120437174|ref|YP_862860.1| 50S ribosomal protein L3 [Gramella forsetii KT0803]
gi|166233147|sp|A0M598|RL3_GRAFK RecName: Full=50S ribosomal protein L3
gi|117579324|emb|CAL67793.1| 50S ribosomal protein L3 [Gramella forsetii KT0803]
Length = 203
Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats.
Identities = 82/208 (39%), Positives = 121/208 (58%), Gaps = 6/208 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT +++ G+ IP TV+ C V RT + +GY A+Q+G + K V
Sbjct: 1 MSGLIGKKIGMTSIFDENGKNIPCTVIQAGPCVVTQVRTKEVDGYEALQLGFDDKKT--V 58
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
K G K+K+ EF+ +D +G + +F G+ VD+ G + GKGF
Sbjct: 59 GKAAEGHAKKAGTVAKRKVVEFQGYNED--YKLGDSVTVEHFKEGEFVDIAGTSKGKGFQ 116
Query: 122 GAMKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH F G +ATHG R+ GS G P RVFK KMAGRMGG RV ++NL V+
Sbjct: 117 GVVKRHGFGGVGQATHGQHNRLRAPGSIGAASYPARVFKGMKMAGRMGGERVKIENLRVL 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
V + L+++KGCVPG+ KNS++++
Sbjct: 177 KVVADKNLLVIKGCVPGS-KNSYVIISK 203
>gi|312899043|ref|ZP_07758427.1| 50S ribosomal protein L3 [Megasphaera micronuciformis F0359]
gi|310619828|gb|EFQ03404.1| 50S ribosomal protein L3 [Megasphaera micronuciformis F0359]
Length = 212
Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats.
Identities = 93/214 (43%), Positives = 128/214 (59%), Gaps = 5/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M ++ +KLGMT V+ EG +PVTV+ VV +T+D +GY ++Q+G GE K K+
Sbjct: 1 MSKAILGKKLGMTQVFTEEGAVVPVTVVEASPNVVVRVKTVDTDGYNSIQLGYGEIKEKH 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP++G F VSP K L E R+ D VG + F G LVDV G T GKGF
Sbjct: 61 LTKPVKGQFDKAGVSPVKHLRELRLT-DTPEYTVGQTLAADIFASGDLVDVVGTTKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
+G +KRH F HG S SHR GS G G+V K KK+ G+MGGN+ TV +L
Sbjct: 120 AGTIKRHGFHRGPMGHG-SKSHREPGSLGPMISGGGGKVIKGKKLPGQMGGNQATVLHLS 178
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VV VD ++ +IL+KG +PG K S +++RD+ K
Sbjct: 179 VVKVDTEKNIILIKGGIPGP-KGSIVMIRDTVKP 211
>gi|90994504|ref|YP_536994.1| ribosomal protein L3 [Porphyra yezoensis]
gi|109893085|sp|Q1XDH4|RK3_PORYE RecName: Full=50S ribosomal protein L3, chloroplastic
gi|90819068|dbj|BAE92437.1| 50S ribosomal protein L3 [Porphyra yezoensis]
Length = 205
Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats.
Identities = 76/208 (36%), Positives = 120/208 (57%), Gaps = 3/208 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ K+GMT ++ G IPVTV+ + C + + + +GY A+QVG + +
Sbjct: 1 MSVGILGTKVGMTQFFDEAGLSIPVTVIQVGPCVITQIKAVSTDGYNAIQVGYKQVAEQK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP+ G P K L E+ ++ DD V + S F VGQ ++V+ ++GKGF
Sbjct: 61 LNKPLLGHLKKSQAPPLKYLREYEMKSTDD-FEVSQILSTDLFQVGQKINVSSRSVGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
SG KRH+F +HG S +HR GS G PGRV+ K MAG++G +VT+KNL++V
Sbjct: 120 SGYQKRHHFSRGPMSHG-SKNHRQPGSIGAGTTPGRVYPGKNMAGQLGNKKVTIKNLQIV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
S++ + L++VKG VPG + + +
Sbjct: 179 SINSENDLLIVKGAVPGKP-GALVKISK 205
>gi|302692256|ref|XP_003035807.1| hypothetical protein SCHCODRAFT_74210 [Schizophyllum commune H4-8]
gi|300109503|gb|EFJ00905.1| hypothetical protein SCHCODRAFT_74210 [Schizophyllum commune H4-8]
Length = 323
Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats.
Identities = 105/220 (47%), Positives = 138/220 (62%), Gaps = 5/220 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVV-HRTLDKN--GYMAVQVGAGEAKV 58
R+GV+ARK GMT ++N G PVTVL L+NCQV RT+ ++ Y AVQV A +
Sbjct: 57 RTGVIARKKGMTTIFNEHGVACPVTVLQLENCQVTANIRTVRRDHTVYHAVQVAASDKAA 116
Query: 59 KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
KN S M G F+ V PK+ + EF V D ++PVG+ S +F GQ VDV +IGK
Sbjct: 117 KNTSIQMLGHFNKAGVPPKQVVKEFPVTP-DAVVPVGTTLSACHFVPGQYVDVVANSIGK 175
Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
GF G MKR FGGL A+HG SISHRS GSTG DP RV+ +KMAGR+G R T +NL
Sbjct: 176 GFQGGMKRWGFGGLAASHGASISHRSLGSTGQNTDPARVWPGRKMAGRLGNERTTTQNLL 235
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
V +D++ ++ V+G VPG ++++ VRD+ K A K
Sbjct: 236 VERIDNELNIVYVRGAVPGVD-DAFVQVRDAKKKAAVGKH 274
>gi|37912950|gb|AAR05282.1| ribosomal protein L3 [uncultured marine gamma proteobacterium
EB000-45B06]
gi|40063177|gb|AAR38014.1| ribosomal protein L3 [uncultured marine bacterium 562]
Length = 211
Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats.
Identities = 79/213 (37%), Positives = 122/213 (57%), Gaps = 2/213 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K GMT ++ +G IPVT + + + +T ++GY A V K N
Sbjct: 1 MSIGLIGKKSGMTRLFLEDGESIPVTAVSVCGNFLADIKTTSRDGYNAFVVSKVN-KSNN 59
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+K F+ +N+ P + D + VG + F +GQ VDVTG + GKG+
Sbjct: 60 VNKSKSEFYKKINLDPGILAEFRSGDEVADDMKVGKHLTADIFEIGQYVDVTGTSKGKGY 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KRHNF ATHG S+SHR+HGS G Q PGRV+K KKM+G MG + TV++L++V
Sbjct: 120 AGVIKRHNFAMQDATHGNSLSHRAHGSIGQCQTPGRVWKGKKMSGHMGNVQKTVQSLKIV 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+D + ++ +KG VPG S + ++ + K +
Sbjct: 180 DLDVENSVLYIKGAVPGF-NGSELKIKPALKKS 211
>gi|325294396|ref|YP_004280910.1| 50S ribosomal protein L3 [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325064844|gb|ADY72851.1| 50S ribosomal protein L3 [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 207
Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats.
Identities = 83/208 (39%), Positives = 116/208 (55%), Gaps = 5/208 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA--GEAKVK 59
G++ RK+GMT ++ +G+ I VTV+ C VV RT +++GY A+Q+G
Sbjct: 1 MKGILGRKVGMTQIFTEDGKAIAVTVIEAGPCTVVQKRTPERDGYSALQLGFMEKNKHES 60
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
KP+ G F + P + L E + D VG + F G+ VD+TG + G+G
Sbjct: 61 KFPKPLLGHFKKAGIKPTRWLKEVKFDNID-QYNVGDKITVEIFQPGEKVDITGTSKGRG 119
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G KRH FGG R +HG S H GS G PGRV K K+MAG G VT++NLE+
Sbjct: 120 FAGYHKRHGFGGGRKSHG-SDFHEGPGSIGACAFPGRVHKGKRMAGHYGNETVTIRNLEI 178
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVR 207
V V ++ LILVKG VPG K ++V+
Sbjct: 179 VDVIPEKNLILVKGSVPG-HKGGLVIVK 205
>gi|323700806|ref|ZP_08112718.1| 50S ribosomal protein L3 [Desulfovibrio sp. ND132]
gi|323460738|gb|EGB16603.1| 50S ribosomal protein L3 [Desulfovibrio desulfuricans ND132]
Length = 210
Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats.
Identities = 86/205 (41%), Positives = 120/205 (58%), Gaps = 2/205 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ RKLGMT ++ +G PVTV+ C V+ +T DK GY A+Q+G + V+K
Sbjct: 6 GLLGRKLGMTRIFKSDGTICPVTVIEAGPCAVMQIKTTDKEGYNALQLGYDTVPERKVNK 65
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
PM+G + + + L EF ++ D +G + F G+ V VTG + GKGF G
Sbjct: 66 PMKGHMAKAGDALYRHLKEFPLEVVDG-YELGQEITVDIFAAGEKVKVTGTSKGKGFQGV 124
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
MKRHNF G RA+HG HR GS G PGRV+K K+MAG MG RVT+ N+E+V V
Sbjct: 125 MKRHNFNGSRASHGAEKVHRVPGSVGNATYPGRVWKGKRMAGHMGSERVTLSNVEIVDVR 184
Query: 184 DKRGLILVKGCVPGAKKNSWILVRD 208
+ ++LVKG VPG N +++R
Sbjct: 185 PEDNVLLVKGQVPGP-NNGLVMIRK 208
>gi|262199869|ref|YP_003271078.1| 50S ribosomal protein L3 [Haliangium ochraceum DSM 14365]
gi|262083216|gb|ACY19185.1| 50S ribosomal protein L3 [Haliangium ochraceum DSM 14365]
Length = 243
Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats.
Identities = 86/215 (40%), Positives = 125/215 (58%), Gaps = 2/215 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MR G++ +KLGMT V+ +G RIPVTV+ VV RT +++GY A+ VG GE +
Sbjct: 3 MRMGILGKKLGMTQVFAEDGERIPVTVIQTGPNYVVGKRTEERDGYSALVVGFGEKPARL 62
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKG 119
+KP+ G F + P+ + + VG F G +DVTG + GKG
Sbjct: 63 ANKPLAGQFKNGVKPPRMQREFRLPADEVAKYEVGQELKISEVFEAGIPLDVTGTSKGKG 122
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
+ G MKRHN G +A+HGV R GS GCR PGRV K K+M+GRMGG R TV+NL++
Sbjct: 123 YQGVMKRHNMSGTKASHGVHEYFRHGGSIGCRLTPGRVHKGKRMSGRMGGERKTVQNLQL 182
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V + ++ +LV+G +PG + ++++R + AV
Sbjct: 183 VQILEEDNAVLVRGAIPGPNQG-YVMLRKAATRAV 216
>gi|73990569|ref|XP_534263.2| PREDICTED: similar to Mitochondrial 39S ribosomal protein L3 (L3mt)
(MRP-L3) [Canis familiaris]
Length = 456
Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats.
Identities = 75/216 (34%), Positives = 114/216 (52%), Gaps = 5/216 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNG--YMAVQVGAGEAKVK 59
R G++A KLGM ++ +G+R VT+L + +C V+ + + + A+ VG
Sbjct: 204 RVGLIALKLGMMPLWTKDGKRHVVTLLQVQDCHVLKYTPKENHNGKMAALTVGGKTVSRF 263
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+ S + F+ + + PK+K+ F V D+ ++ G+ ++F GQ VDVT TIGKG
Sbjct: 264 HKSTSVLEFYQELGLPPKQKVKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGKG 322
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G MKR F G ATHG + +HR G+ D RV+ KM G+MG T L+V
Sbjct: 323 FQGVMKRWGFKGQPATHGQTKTHRRPGAIST-GDVARVWPGTKMPGQMGNKDRTEYGLKV 381
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
++ K +I V G VPG +N + +RDS A
Sbjct: 382 WRINTKNNIIYVNGSVPG-HRNCLVKIRDSNLPAYK 416
>gi|308190095|ref|YP_003923026.1| 50S ribosomal protein L3 [Mycoplasma fermentans JER]
gi|319777391|ref|YP_004137042.1| 50S ribosomal protein l3 [Mycoplasma fermentans M64]
gi|307624837|gb|ADN69142.1| 50S ribosomal protein L3 [Mycoplasma fermentans JER]
gi|318038466|gb|ADV34665.1| 50S ribosomal protein L3 [Mycoplasma fermentans M64]
Length = 275
Score = 194 bits (493), Expect = 7e-48, Method: Composition-based stats.
Identities = 80/216 (37%), Positives = 120/216 (55%), Gaps = 6/216 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT ++ G +PVTV+ + V + DKNGY+A Q+ GE K
Sbjct: 1 MKGILGRKIGMTQIFTELGASVPVTVIEVQPNVVTKVLSADKNGYVATQIAVGEKKEHRS 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP++G F+ +PK+ + E R + +G + F G+LVD+TG + GKGF+
Sbjct: 61 NKPLKGQFAQAKTTPKRYVKEIRGMQG---YELGQTIKANIFKAGELVDITGTSKGKGFA 117
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP--GRVFKNKKMAGRMGGNRVTVKNLEV 179
G +KR N +HG + TG D RVFK M G +G R TV+NLE+
Sbjct: 118 GTIKRWNQHIGPKSHGGGGGSQPVRQTGSLGDISGNRVFKGMTMPGHLGAVRTTVQNLEI 177
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
V VD ++LVKG +PGA KNS++++R++ K N
Sbjct: 178 VKVDVANNIMLVKGSIPGA-KNSYVMIREAVKGLPN 212
>gi|291280148|ref|YP_003496983.1| 50S ribosomal protein L3 [Deferribacter desulfuricans SSM1]
gi|290754850|dbj|BAI81227.1| 50S ribosomal protein L3 [Deferribacter desulfuricans SSM1]
Length = 214
Score = 194 bits (493), Expect = 7e-48, Method: Composition-based stats.
Identities = 99/217 (45%), Positives = 127/217 (58%), Gaps = 4/217 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEA-KVK 59
M SG++ +K+GMT V+ EG IPVTVL + C VV + +K+GY A+Q+G + K+K
Sbjct: 1 MLSGLLGKKIGMTQVFTSEGLVIPVTVLQVGPCVVVQKKVKEKDGYNALQIGFEKVTKLK 60
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+KPM G F NV P K L E +V D+ G + F G VDV G++ GKG
Sbjct: 61 KVNKPMLGHFKKHNVEPLKYLKEVKVDNPDE-FNEGQEITVEIFNEGDFVDVQGISKGKG 119
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G MKRH F G A+HG S HR+ GS G + PG K +KM GRMGG +VTV LEV
Sbjct: 120 FQGVMKRHGFAGGPASHG-SNFHRAPGSVGMCEFPGETPKGRKMPGRMGGEKVTVMGLEV 178
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
V V + L+LVKG VPG NS + VR + K
Sbjct: 179 VKVIPDKNLVLVKGAVPG-HNNSLVYVRKAVKVRKRA 214
>gi|32491292|ref|NP_871546.1| hypothetical protein WGLp543 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|42559632|sp|Q8D212|RL3_WIGBR RecName: Full=50S ribosomal protein L3
gi|25166499|dbj|BAC24689.1| rplC [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 215
Score = 194 bits (493), Expect = 7e-48, Method: Composition-based stats.
Identities = 90/208 (43%), Positives = 133/208 (63%), Gaps = 2/208 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ RK+GMT +N +G IPVTV+ + + ++V + ++K+GY ++QV G K +K
Sbjct: 3 GLIGRKIGMTRTFNSDGSSIPVTVIKISDNKIVQIKKIEKDGYSSIQVTTGVKKFSRENK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
+ G F V + L+EF+V K+ VG V S + F V++TG++ GKGFSG
Sbjct: 63 SIIGHFKKNKVELGRGLWEFKVDKNSKFY-VGQVLSINTFININKVNITGISKGKGFSGT 121
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
MKR NF G A+HG S+SHR+ GS G Q PG+VFK KKM+G +G N+ TVKNL VV +D
Sbjct: 122 MKRWNFHGQDASHGNSLSHRAPGSIGQNQTPGKVFKGKKMSGHLGYNKNTVKNLFVVKID 181
Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
+ L+L+KG VPG+ K S ++++ K
Sbjct: 182 LEHELLLIKGSVPGS-KGSDLIIKPVVK 208
>gi|260061897|ref|YP_003194977.1| 50S ribosomal protein L3 [Robiginitalea biformata HTCC2501]
gi|88786030|gb|EAR17199.1| 50S ribosomal protein L3 [Robiginitalea biformata HTCC2501]
Length = 196
Score = 194 bits (493), Expect = 7e-48, Method: Composition-based stats.
Identities = 80/196 (40%), Positives = 115/196 (58%), Gaps = 3/196 (1%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
MT +++ G+ IP TV+ C V RT + +GY A+Q+G + K +K G F
Sbjct: 1 MTSIFDENGKNIPCTVIEAGPCVVTQVRTEEVDGYNALQLGFDDKADKRANKAENGHFKK 60
Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF-G 130
+PKKK+ EFR ++ +G + F G+ VDV G++ GKGF G +KRH F G
Sbjct: 61 AGTAPKKKVVEFRYFEEGA-FKLGDTINVELFKEGEFVDVNGISKGKGFQGVVKRHGFGG 119
Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190
++THG R+ GS G DP RVFK KMAG+MG RVTV+NL V+ V ++ L++
Sbjct: 120 VGQSTHGQHNRLRAPGSIGAASDPSRVFKGMKMAGQMGNQRVTVQNLRVLKVVPEKNLLV 179
Query: 191 VKGCVPGAKKNSWILV 206
+KG VPG KN++I +
Sbjct: 180 LKGAVPG-HKNAYITI 194
>gi|194334861|ref|YP_002016721.1| 50S ribosomal protein L3 [Prosthecochloris aestuarii DSM 271]
gi|226730548|sp|B4S5M7|RL3_PROA2 RecName: Full=50S ribosomal protein L3
gi|194312679|gb|ACF47074.1| ribosomal protein L3 [Prosthecochloris aestuarii DSM 271]
Length = 209
Score = 194 bits (493), Expect = 7e-48, Method: Composition-based stats.
Identities = 86/202 (42%), Positives = 119/202 (58%), Gaps = 1/202 (0%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ +K+GMT +YN + +P TV+ C V +T D +GY A Q+ GE K VSKP
Sbjct: 4 ILGKKIGMTRIYNEKREAVPCTVIQAAPCFVSQVKTSDNDGYEAYQLSIGERKEAKVSKP 63
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
MRG ++ ++P K+ EF D L +GS S F G VDV G+T GKGF+G +
Sbjct: 64 MRGHYAKAGITPGYKIAEFGKDLMDADLELGSSVSVDMFKEGDKVDVRGVTKGKGFAGVV 123
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KRHNF G THG S R+ GS G DP R FK +MAGRMG V V+ L++V +
Sbjct: 124 KRHNFAGGSRTHGQSDRLRAPGSVGGSSDPSRTFKGMRMAGRMGSKNVKVRGLQIVKIIP 183
Query: 185 KRGLILVKGCVPGAKKNSWILV 206
+ L+++KG VPG KNS++ +
Sbjct: 184 ESNLLVIKGSVPG-VKNSYVEI 204
>gi|299139130|ref|ZP_07032306.1| 50S ribosomal protein L3 [Acidobacterium sp. MP5ACTX8]
gi|298598810|gb|EFI54972.1| 50S ribosomal protein L3 [Acidobacterium sp. MP5ACTX8]
Length = 242
Score = 194 bits (493), Expect = 8e-48, Method: Composition-based stats.
Identities = 75/220 (34%), Positives = 121/220 (55%), Gaps = 7/220 (3%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVKNV 61
+G++ +K+GMT +++ G PVTVL + C + +T +GY A Q+G E K +
Sbjct: 4 TGILGKKIGMTQLFDDRGDIHPVTVLKVGPCVITQLKTQQTDGYSAAQIGLVEFVKASKI 63
Query: 62 SKPMRGFFSSVNVSPKKKLFE---FRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
+K M G F+ NV P +++ E V++ ++ G + F + VDV G + G+
Sbjct: 64 NKAMTGHFAKSNVPPVREIREVQIEFVEEGEEAPKAGDRVTVEIFNETRFVDVIGNSKGR 123
Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
GF+G ++RH FGG +HG + GS G P RVF ++M G MG N+VTV+NL
Sbjct: 124 GFAGVIRRHGFGGGPKSHG--HMFQVQGSIGASSFPSRVFPGQRMPGHMGTNQVTVRNLR 181
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+ +D + L+LV+G VPGA+ ++LV + +G
Sbjct: 182 IRGIDVEDNLLLVEGAVPGARDG-YVLVSKAVAPPRERRG 220
>gi|149632093|ref|XP_001514282.1| PREDICTED: similar to Mitochondrial ribosomal protein L3
[Ornithorhynchus anatinus]
Length = 429
Score = 194 bits (493), Expect = 8e-48, Method: Composition-based stats.
Identities = 77/219 (35%), Positives = 114/219 (52%), Gaps = 4/219 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGY-MAVQVGAGEAKVKN 60
R G++A KLGM ++ G++ VT+L + +C VV + + G A+ VG A
Sbjct: 178 RVGLIALKLGMMPLWTKNGKKHAVTLLQVQDCHVVKYTPSEGAGKLGALTVGGKNASPFY 237
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
S+ + V PK+++ FRV ++ + G+ ++F GQ VDVT TIGKGF
Sbjct: 238 KSEESLEMYREAGVPPKQRIKIFRVTENA-KIKPGTPLYAAHFRPGQYVDVTAKTIGKGF 296
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G MKR F G ATHG + +HR G+ D RV+ KKM G+MG T L+V
Sbjct: 297 QGVMKRWGFKGQPATHGQTKTHRRPGAIST-GDIARVWPGKKMPGQMGNRYQTAFGLKVW 355
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
++ K +I V G VPG K+ ++ +RD+ K K
Sbjct: 356 RINTKHNIIYVNGSVPG-HKSCFVKIRDTKLPTYRDKLK 393
>gi|325088644|gb|EGC41954.1| 50S ribosomal protein [Ajellomyces capsulatus H88]
Length = 301
Score = 194 bits (493), Expect = 8e-48, Method: Composition-based stats.
Identities = 91/218 (41%), Positives = 139/218 (63%), Gaps = 3/218 (1%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
+R+G +A K GMT +++ G+RIP T+L LD QV+ H+TL KNGY AVQ+G G +
Sbjct: 71 LRTGTLAIKKGMTAIFDLETGKRIPCTILQLDRVQVISHKTLKKNGYYAVQIGCGWKHER 130
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V++PM G F++ V+PK+ + EFRV+ ++ LLP+G + + ++F GQ VD + G G
Sbjct: 131 AVTRPMLGHFAANGVAPKRHIHEFRVKDENGLLPIGEMINANWFQEGQYVDARSNSRGMG 190
Query: 120 FSGAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
F+G MKRH F G +HGVS++HR S + RV+ KKMAG MG +VT++NL+
Sbjct: 191 FAGVMKRHGFHGQDRSHGVSLTHRSMGSSGPGQGGGSRVYPGKKMAGNMGNKQVTLQNLK 250
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
V+ VD ++G+++V G V G K + ++D+ K
Sbjct: 251 VLKVDAEKGIVVVNGNVSGP-KGCIVKLQDALKKPWPT 287
>gi|290968244|ref|ZP_06559787.1| 50S ribosomal protein L3 [Megasphaera genomosp. type_1 str. 28L]
gi|290781726|gb|EFD94311.1| 50S ribosomal protein L3 [Megasphaera genomosp. type_1 str. 28L]
Length = 212
Score = 194 bits (493), Expect = 8e-48, Method: Composition-based stats.
Identities = 92/214 (42%), Positives = 128/214 (59%), Gaps = 5/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M ++ +KLGMT ++ EG +PVTV+ VV +T+D +GY ++Q+G GE K K+
Sbjct: 1 MSKAILGKKLGMTQIFTEEGAVVPVTVVEASPNVVVRVKTVDTDGYNSIQIGYGEVKEKH 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP++G F+ V+P K L E R+ D VG + F G LVDV G GKGF
Sbjct: 61 LTKPVKGQFAKAGVNPVKYLRELRLT-DTPEYTVGQTLAADIFASGDLVDVIGTGKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
+G +KRH F HG S SHR GS G G+V K KK+ G+MGGN+ TV +L
Sbjct: 120 AGTIKRHGFHRGPMGHG-SKSHREPGSLGPMISGGGGKVVKGKKLPGQMGGNQATVLHLS 178
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VV VD + LIL+KG +PGA K S +++RD+ K
Sbjct: 179 VVKVDMDKNLILIKGGIPGA-KGSLVMIRDTVKP 211
>gi|325280968|ref|YP_004253510.1| 50S ribosomal protein L3 [Odoribacter splanchnicus DSM 20712]
gi|324312777|gb|ADY33330.1| 50S ribosomal protein L3 [Odoribacter splanchnicus DSM 20712]
Length = 207
Score = 194 bits (493), Expect = 8e-48, Method: Composition-based stats.
Identities = 86/206 (41%), Positives = 126/206 (61%), Gaps = 4/206 (1%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT V+++EG+ IP TV+ C V +T++K+GY A+Q+G E K K+ +K
Sbjct: 5 GLIGKKVGMTSVFSVEGKSIPCTVIECGPCVVTQVKTIEKDGYEALQLGFDEKKEKHTTK 64
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
+ G F +PK+KL EF ++ L G V + VD+ G + GKG+ G
Sbjct: 65 QLSGHFKKAGTTPKRKLVEFAGFAEEHKL--GDVIDVTILEGTAYVDIVGTSKGKGYQGV 122
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G +ATHG R GS G P RVFK +M GRMGG+RVTV+NLEV+ V
Sbjct: 123 VKRHGFGGVGQATHGQHNRLRKPGSIGACSTPARVFKGMRMGGRMGGDRVTVENLEVLKV 182
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRD 208
+ L+LVKG VPG+ K S+++++
Sbjct: 183 IPENNLLLVKGSVPGS-KGSYVIIQK 207
>gi|255712065|ref|XP_002552315.1| KLTH0C02002p [Lachancea thermotolerans]
gi|238933694|emb|CAR21877.1| KLTH0C02002p [Lachancea thermotolerans]
Length = 268
Score = 194 bits (493), Expect = 8e-48, Method: Composition-based stats.
Identities = 99/215 (46%), Positives = 141/215 (65%), Gaps = 2/215 (0%)
Query: 2 RSGVVARKLGMTCVYNI-EGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
R G ++ K GM ++ G R+ TVL L+N +V++HR L NGY A QVG G
Sbjct: 54 RCGALSLKRGMIPYFDEASGNRVAATVLELNNVEVIMHRNLKDNGYFACQVGFGSKHPSK 113
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VS+ M G F+S V+PK+K+ EFRV+ LLP+G++ PS+F GQ VD+ ++ GKGF
Sbjct: 114 VSRQMLGHFASKIVNPKEKVVEFRVKDQSGLLPLGTLIKPSFFMPGQYVDLRSISKGKGF 173
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR+NF GL+A+HGVS+SHR GS G Q PGRV KKM G MG +VT++N +++
Sbjct: 174 AGVMKRYNFKGLKASHGVSVSHRKGGSYGQNQTPGRVLPGKKMPGHMGVQQVTIQNSQIL 233
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
VDD+ G+++VKG V G K ++ ++D+ K A
Sbjct: 234 KVDDENGVVIVKGSVAGP-KGGFVRIQDAIKKAPK 267
>gi|320451300|ref|YP_004203396.1| 50S ribosomal protein L3 [Thermus scotoductus SA-01]
gi|320151469|gb|ADW22847.1| 50S ribosomal protein L3 [Thermus scotoductus SA-01]
Length = 206
Score = 194 bits (493), Expect = 8e-48, Method: Composition-based stats.
Identities = 95/213 (44%), Positives = 123/213 (57%), Gaps = 7/213 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ K+GMT +Y + R +PVTV+ C VV RT +K+GY AVQ+G K V
Sbjct: 1 MKGILGMKVGMTRIYRED-RAVPVTVILAGPCPVVQRRTPEKDGYTAVQLGFLPQNPKRV 59
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
++PM+G F+ V P + L E R + G V + F G+ VDVTG + G+G +
Sbjct: 60 NRPMKGHFARAGVGPVRILKEIRDFNPE-----GDVVTVEIFKAGERVDVTGTSKGRGTA 114
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR NF G +HG HR GS G R+ PGRV+K KKMAGR G RVTV NLEVV
Sbjct: 115 GVMKRWNFAGGPDSHGAHKIHRHPGSIGNRKTPGRVYKGKKMAGRYGAERVTVMNLEVVD 174
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V + L+LVKG VPG +LVR + K A
Sbjct: 175 VIPEENLLLVKGAVPGP-NGGLVLVRQTKKVAK 206
>gi|160914559|ref|ZP_02076774.1| hypothetical protein EUBDOL_00565 [Eubacterium dolichum DSM 3991]
gi|158433717|gb|EDP12006.1| hypothetical protein EUBDOL_00565 [Eubacterium dolichum DSM 3991]
Length = 234
Score = 194 bits (492), Expect = 9e-48, Method: Composition-based stats.
Identities = 77/219 (35%), Positives = 112/219 (51%), Gaps = 5/219 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RKLGMT V+ +G IPVTV+ V+ +T++ +GY AVQ+G + K K
Sbjct: 6 MKGILGRKLGMTQVFTEDGTLIPVTVVEACPNIVLQKKTVENDGYNAVQIGFEDIKEKRT 65
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+K G N + K+ E R D L +G+ F G+ VDV G + GKG++
Sbjct: 66 TKANVGHAKKANTTAKRFAREVR-DADFADLDLGAEVKVDIFVAGETVDVIGTSKGKGYN 124
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGR---VFKNKKMAGRMGGNRVTVKNLE 178
G + R+N THG S + R GS R + K MAG+ GG R T +NL
Sbjct: 125 GTIVRNNAHQGPKTHGGSKNIRHIGSLATNGITSRQGKILKGTIMAGQEGGYRTTNQNLT 184
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
V+ VD + +L+KG VPG K ++VR + S N +
Sbjct: 185 VIKVDVENNYLLIKGNVPGP-KRGLVMVRSAKCSKGNSE 222
>gi|299830598|ref|YP_003735046.1| 50S ribosomal protein L3 [Durinskia baltica]
gi|297384962|gb|ADI40261.1| 50S ribosomal protein L3 [Durinskia baltica]
Length = 207
Score = 194 bits (492), Expect = 9e-48, Method: Composition-based stats.
Identities = 80/206 (38%), Positives = 120/206 (58%), Gaps = 2/206 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ K+GMT +++ G IPVT+L + C V +T K+GY ++QVG K+
Sbjct: 1 MSVGLLGNKIGMTQIFDETGNIIPVTILKVGPCVVTQVKTEAKDGYNSIQVGYSRVSSKS 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+++P G N+ P K L EFR+ D VG + ++GQ VD+ G TIGKGF
Sbjct: 61 LTQPELGHLQKSNIQPLKHLKEFRITN-DQNFEVGQTLNVDLLSLGQFVDIQGKTIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G KRHNF THG S +HR+ GS G PGRV K+M+G++G +TVK L+V+
Sbjct: 120 TGLQKRHNFARGPMTHG-SKNHRAPGSIGMGTTPGRVLPGKRMSGQVGNKVITVKKLKVI 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
++ + ++++KG VPG N +V
Sbjct: 179 QLNLEENILVIKGSVPGKPGNLLSIV 204
>gi|27904942|ref|NP_778068.1| 50S ribosomal protein L3 [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
gi|42559626|sp|Q89A68|RL3_BUCBP RecName: Full=50S ribosomal protein L3
gi|27904340|gb|AAO27173.1| 50S ribosomal protein L3 [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
Length = 214
Score = 194 bits (492), Expect = 9e-48, Method: Composition-based stats.
Identities = 84/209 (40%), Positives = 124/209 (59%), Gaps = 2/209 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +KLGMT ++ EG PVT++ + ++ +T+ ++ Y AVQV G K + K
Sbjct: 3 GLIGQKLGMTRIFTEEGTVYPVTIIKVKENRITQIKTISRDLYHAVQVTTGIKKSNKLLK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
P G F V K L+EF++ + +G + F+ + VD+ G + GKGF G
Sbjct: 63 PEIGHFLKSGVKIGKGLWEFKLTNSSINDFKIGQSLNLELFSNIKKVDIIGTSKGKGFCG 122
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KR NF ATHG S+SHR+ GS G Q PGRVFK KKMAG +G +RVTV+NL++V +
Sbjct: 123 TVKRWNFHTQDATHGNSLSHRAPGSIGQNQTPGRVFKGKKMAGHLGNHRVTVQNLDIVKI 182
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
D + +ILVKG VPG + I ++ + K
Sbjct: 183 DLNQEIILVKGAVPGYSGGNII-IKPAIK 210
>gi|116515259|ref|YP_802888.1| 50S ribosomal protein L3 [Buchnera aphidicola str. Cc (Cinara
cedri)]
gi|122285345|sp|Q057A4|RL3_BUCCC RecName: Full=50S ribosomal protein L3
gi|58384692|gb|AAW72707.1| 50S ribosomal protein L3 [Buchnera aphidicola (Cinara cedri)]
gi|116257113|gb|ABJ90795.1| 50S ribosomal protein L3 [Buchnera aphidicola str. Cc (Cinara
cedri)]
Length = 208
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 84/210 (40%), Positives = 127/210 (60%), Gaps = 2/210 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +KLGMT ++ E IPVT + + + VV +T++ + Y ++Q+ G K K V
Sbjct: 1 MIGLVGKKLGMTRIFFEEYTSIPVTAIEILDNIVVQVKTIENDNYESIQLTTGFKKEKKV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
K G F NVS + L+EF+ + + G + ++F + +D+TG++ GKGF+
Sbjct: 61 LKSEYGHFLKFNVSVGRGLWEFKCKNSSN-YSSGQKITINFFKNIKKLDITGISKGKGFA 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF ATHG S+SHR GS G Q PG VFK KKM+G +G R T++NL++V
Sbjct: 120 GTVKRWNFRMQDATHGNSLSHRVPGSIGQNQTPGHVFKGKKMSGHLGDQRTTIQNLKIVK 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+DD +IL+KG +PG+ S IL++ S K
Sbjct: 180 IDDINKIILIKGSIPGSI-GSDILLKPSIK 208
>gi|295107591|emb|CBL05134.1| LSU ribosomal protein L3P [Gordonibacter pamelaeae 7-10-1-b]
Length = 206
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 90/209 (43%), Positives = 122/209 (58%), Gaps = 3/209 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M + + +K+GMT ++ + R +PVTV+ + +V +T +GY AVQ+G G K K
Sbjct: 1 MINAIYGKKIGMTQIFGEDDRVVPVTVIQAEPNKVCQVKTKATDGYEAVQMGFGAIKEKK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KPM+G F +P + L E RV+ VG + + F + VDVTG + GKGF
Sbjct: 61 VNKPMKGHFEKQGAAPVRYLREVRVEN-AGEYNVGDEQTVAAFAETKKVDVTGTSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR+ F G HG HR+ GS G P RVFK K+ G MG + VTVKNLEVV
Sbjct: 120 AGVMKRYGFRGGPGGHGAH-FHRAPGSVGQCATPSRVFKGLKLPGHMGCDTVTVKNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
VD+ + LILVKG VPG KN + VR +
Sbjct: 179 RVDEDQNLILVKGAVPGG-KNGIVRVRMA 206
>gi|15674081|ref|NP_268256.1| 50S ribosomal protein L3 [Lactococcus lactis subsp. lactis Il1403]
gi|281492759|ref|YP_003354739.1| 50S ribosomal protein L3P [Lactococcus lactis subsp. lactis KF147]
gi|42559688|sp|Q9CDW2|RL3_LACLA RecName: Full=50S ribosomal protein L3
gi|12725153|gb|AAK06197.1|AE006438_11 50S ribosomal protein L3 [Lactococcus lactis subsp. lactis Il1403]
gi|281376411|gb|ADA65897.1| LSU ribosomal protein L3P [Lactococcus lactis subsp. lactis KF147]
gi|326407632|gb|ADZ64703.1| 50S ribosomal protein L3 [Lactococcus lactis subsp. lactis CV56]
Length = 207
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 83/213 (38%), Positives = 122/213 (57%), Gaps = 6/213 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G IPVTV+ V+ ++++ +GY A QVG +
Sbjct: 1 MSKGILGKKVGMTQIFTENGELIPVTVIEATPNTVLQVKSVETDGYEATQVGFDTLREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EF+ + + VG+ + F G +VDVTG + GKGF
Sbjct: 61 TNKPAKGHAAKANTTPKRFVREFKGLEGAE---VGAEITVDTFAAGDVVDVTGTSKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G +V K KK+AGRMG RVTV+NL +
Sbjct: 118 QGPIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-ANKVPKGKKLAGRMGNKRVTVQNLVIA 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
V ++ +ILVKG VPGAKK S I+V+ + K+
Sbjct: 176 QVLPEKNVILVKGNVPGAKK-SLIVVKSAIKAK 207
>gi|291334061|gb|ADD93734.1| 50S ribosomal protein L3 [uncultured marine bacterium
MedDCM-OCT-S05-C114]
Length = 215
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 85/217 (39%), Positives = 126/217 (58%), Gaps = 5/217 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA--GEAKV 58
M ++ +KLGM+ VY+ + +PVT++ C ++ ++LDK+GY A+Q+G
Sbjct: 1 MNLELIGKKLGMSQVYDEDNNLVPVTIVEAGPCPILQVKSLDKDGYEAIQIGFNPKGKAP 60
Query: 59 KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
+K G S NV P+ E R+ K + GS + F+ ++VDV T GK
Sbjct: 61 NKPNKCQIGKASKANVEPQHLSQEIRI-KGEHSFEQGSSLTVENFSDVKVVDVISTTKGK 119
Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
GF G +KR NFGG A+HG S+ HR GS G Q PGRVFKNKKM G G + T +NL+
Sbjct: 120 GFQGVVKRWNFGGGPASHG-SMFHRRGGSYGLCQWPGRVFKNKKMPGHTGTAKRTTQNLQ 178
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
+V + ++ L+L+KG VPG+ K + + VR + KS V+
Sbjct: 179 LVKILPEKNLLLIKGSVPGS-KGTILTVRVAKKSKVS 214
>gi|194477058|ref|YP_002049237.1| 50S ribosomal protein L3 [Paulinella chromatophora]
gi|212288241|sp|B1X508|RK3_PAUCH RecName: Full=50S ribosomal protein L3, organellar chromatophore
gi|171192065|gb|ACB43027.1| 50S ribosomal protein L3 [Paulinella chromatophora]
Length = 218
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 85/217 (39%), Positives = 128/217 (58%), Gaps = 5/217 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGM+ ++ EG+ +PVT++ C++ +++D +GY AVQ+G GE + K
Sbjct: 1 MSIGILGKKLGMSQFFDEEGKAVPVTLIEAGPCRITQLKSIDTDGYTAVQLGYGETRQKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KP +G + L E+RV+ D L +G+ + F GQ VDV+G ++G+GF
Sbjct: 61 VNKPSKGHLARSGEQLLSHLREYRVETIDG-LKLGNSITVEDFKAGQKVDVSGDSMGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
SG KRH F THG S +HR GSTG PGR++ K+MAGR GG ++T + L +V
Sbjct: 120 SGYQKRHGFSRGPMTHG-SKNHREPGSTGAGTTPGRIYPGKRMAGRYGGKQITTRGLVIV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
VD L++VKG VPG S + + + VN K
Sbjct: 179 KVDTGHNLLVVKGSVPGKP-GSLLNIFPA--KGVNSK 212
>gi|293402501|ref|ZP_06646636.1| 50S ribosomal protein L3 [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291304015|gb|EFE45269.1| 50S ribosomal protein L3 [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 241
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 79/223 (35%), Positives = 117/223 (52%), Gaps = 8/223 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RKLGMT V+ EG IPVTV+ V+ +T++ +GY AVQ+G + K
Sbjct: 15 MKGILGRKLGMTQVFTEEGTLIPVTVVEATPNVVLQKKTVENDGYEAVQLGFEDVKETRS 74
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP +G + N +PK+ E R + D + +G F G+ VDV G + GKG++
Sbjct: 75 TKPSKGHAAKANTAPKRFAQEIRDCELD--VNLGDEVKVDIFAAGETVDVIGTSKGKGYN 132
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGR---VFKNKKMAGRMGGNRVTVKNLE 178
G + R+N +HG S HR GS R + K MAG+ GG R T +NL
Sbjct: 133 GTIVRNNAKIGPKSHG-SGHHRHIGSLATNGITSRQGKILKGTIMAGQEGGYRTTNQNLT 191
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
+V VD + +L+KG VPG K ++VR + K + K V+
Sbjct: 192 IVKVDVENNYLLIKGNVPGP-KCGLVMVRTA-KCSKGDKAPVT 232
>gi|78357300|ref|YP_388749.1| 50S ribosomal protein L3 [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|109893427|sp|Q30Z42|RL3_DESDG RecName: Full=50S ribosomal protein L3
gi|78219705|gb|ABB39054.1| LSU ribosomal protein L3P [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 209
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 93/205 (45%), Positives = 127/205 (61%), Gaps = 2/205 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ RK+GMT ++ +G + VTV+ C V+ + K+GY AVQ+G EAK K+V+K
Sbjct: 6 GILGRKIGMTRIFANDGSAVAVTVIQAGPCPVIQVKDAAKDGYNAVQIGFEEAKEKHVNK 65
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P RG + L E R++ + VG + FT G+ V VTG +IGKGF+G
Sbjct: 66 PARGHMDKAGRGLFRVLREIRLEAPAE-QKVGDDLTVGLFTPGEFVKVTGTSIGKGFAGV 124
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
MKR NFGG+ A+HG HRS GS G PG+V+KNKKMAG MG +VTVK+L+++ V
Sbjct: 125 MKRWNFGGMPASHGHEAVHRSPGSIGHATFPGKVWKNKKMAGHMGARQVTVKSLQIIEVR 184
Query: 184 DKRGLILVKGCVPGAKKNSWILVRD 208
+ LILVKG VPG KN ++VR
Sbjct: 185 AEDNLILVKGPVPGP-KNGLVMVRK 208
>gi|53715466|ref|YP_101458.1| 50S ribosomal protein L3 [Bacteroides fragilis YCH46]
gi|60683438|ref|YP_213582.1| 50S ribosomal protein L3 [Bacteroides fragilis NCTC 9343]
gi|253566670|ref|ZP_04844123.1| 50S ribosomal protein L3 [Bacteroides sp. 3_2_5]
gi|255011646|ref|ZP_05283772.1| 50S ribosomal protein L3 [Bacteroides fragilis 3_1_12]
gi|265767548|ref|ZP_06095214.1| 50S ribosomal protein L3 [Bacteroides sp. 2_1_16]
gi|313149482|ref|ZP_07811675.1| 50S ribosomal protein L3 [Bacteroides fragilis 3_1_12]
gi|81313514|sp|Q5L8A9|RL3_BACFN RecName: Full=50S ribosomal protein L3
gi|81824898|sp|Q64NK8|RL3_BACFR RecName: Full=50S ribosomal protein L3
gi|52218331|dbj|BAD50924.1| 50S ribosomal protein L3 [Bacteroides fragilis YCH46]
gi|60494872|emb|CAH09679.1| putative 50S ribosomal protein L3 [Bacteroides fragilis NCTC 9343]
gi|251944842|gb|EES85317.1| 50S ribosomal protein L3 [Bacteroides sp. 3_2_5]
gi|263252853|gb|EEZ24365.1| 50S ribosomal protein L3 [Bacteroides sp. 2_1_16]
gi|301164923|emb|CBW24484.1| putative 50S ribosomal protein L3 [Bacteroides fragilis 638R]
gi|313138249|gb|EFR55609.1| 50S ribosomal protein L3 [Bacteroides fragilis 3_1_12]
Length = 205
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 83/204 (40%), Positives = 126/204 (61%), Gaps = 4/204 (1%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G + K K+ +K
Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYAAVQLGFQDKKEKHTTK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P+ G F V+PK+ L EF ++ ++ L +G + F VDV G + GKGF G
Sbjct: 63 PLMGHFKKAGVTPKRHLAEF--KEFENELNLGDTVTVELFDGADYVDVVGTSKGKGFQGV 120
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G ++THG R GS G P +VFK +M G+MGG+RVTV+NL+V+ V
Sbjct: 121 VKRHGFGGVGQSTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTVQNLQVLKV 180
Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
+ L+L+KG VPG K S +L+
Sbjct: 181 IAEHNLLLIKGSVPGC-KGSIVLI 203
>gi|303230114|ref|ZP_07316883.1| 50S ribosomal protein L3 [Veillonella atypica ACS-134-V-Col7a]
gi|303231226|ref|ZP_07317964.1| 50S ribosomal protein L3 [Veillonella atypica ACS-049-V-Sch6]
gi|302514133|gb|EFL56137.1| 50S ribosomal protein L3 [Veillonella atypica ACS-049-V-Sch6]
gi|302515175|gb|EFL57148.1| 50S ribosomal protein L3 [Veillonella atypica ACS-134-V-Col7a]
Length = 213
Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats.
Identities = 98/216 (45%), Positives = 132/216 (61%), Gaps = 5/216 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M ++ +KLGMT V+ EG+ +PVTV+ VV +T++ +GY AVQ+G G K K+
Sbjct: 1 MSKAILGKKLGMTQVFTAEGQLVPVTVVETTPSVVVRVKTVETDGYEAVQIGYGSIKEKH 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP++G F V+P K L E RV D VG + F G+LVDV G GKGF
Sbjct: 61 LTKPVKGQFDKAGVAPVKYLREVRVDSAAD-YTVGQTLAADIFAEGELVDVVGTGKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
+G +KRHNF THG S SHR GS G G+V+K KK+ G+MGG RVTV+ L
Sbjct: 120 AGTIKRHNFSRGPETHG-SKSHREPGSIGPMISGGGGKVYKGKKLPGQMGGYRVTVQRLS 178
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VV VD +R L+LVKG +PGA K S ++VR++ K
Sbjct: 179 VVKVDAERNLLLVKGGIPGA-KGSLVMVRNTVKPVK 213
>gi|300088197|ref|YP_003758719.1| 50S ribosomal protein L3 [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299527930|gb|ADJ26398.1| 50S ribosomal protein L3 [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 207
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 87/201 (43%), Positives = 119/201 (59%), Gaps = 5/201 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M +G++ +KLGMT VY+ EG+ PVTVL + C VV +T +++GY A Q+G GE K
Sbjct: 1 MINGIIGKKLGMTQVYSTEGKMEPVTVLQVGPCTVVQVKTPERDGYTAAQLGFGEDKK-- 58
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++K +G + D D + VG+ S F G+ VDVTG++ G+GF
Sbjct: 59 LTKAEQGHVKEYGN---FRHLREFRLDDLDGVEVGARVDASLFVDGERVDVTGISKGRGF 115
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KRH F G THG S HR+ GS G PGRVFK +MAG MG +VTV L+VV
Sbjct: 116 AGTVKRHGFAGGPKTHGQSDRHRAPGSIGATTTPGRVFKGTRMAGHMGNEQVTVSGLKVV 175
Query: 181 SVDDKRGLILVKGCVPGAKKN 201
D ++ L+LVKG VPGA+
Sbjct: 176 KTDVEKNLLLVKGAVPGARNG 196
>gi|73748316|ref|YP_307555.1| 50S ribosomal protein L3 [Dehalococcoides sp. CBDB1]
gi|147669096|ref|YP_001213914.1| 50S ribosomal protein L3 [Dehalococcoides sp. BAV1]
gi|289432364|ref|YP_003462237.1| 50S ribosomal protein L3 [Dehalococcoides sp. GT]
gi|109893426|sp|Q3ZZM4|RL3_DEHSC RecName: Full=50S ribosomal protein L3
gi|189042842|sp|A5FRY9|RL3_DEHSB RecName: Full=50S ribosomal protein L3
gi|73660032|emb|CAI82639.1| ribosomal protein L3 [Dehalococcoides sp. CBDB1]
gi|146270044|gb|ABQ17036.1| LSU ribosomal protein L3P [Dehalococcoides sp. BAV1]
gi|288946084|gb|ADC73781.1| 50S ribosomal protein L3 [Dehalococcoides sp. GT]
Length = 205
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 78/211 (36%), Positives = 124/211 (58%), Gaps = 6/211 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ +G+ PVT++ C VV +T ++GY AVQ+G G+AK +
Sbjct: 1 MIQGIIGKKIGMTQIFQEDGKAQPVTLVEAGPCVVVQVKTEKQDGYEAVQLGYGKAK--H 58
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++ ++G K+ D + VG + S F G+ +D +G++ G+GF
Sbjct: 59 ITSAVKGQCRGFGE---FKVLREVDVDDIAAVSVGDQITVSDFKDGEKIDASGVSRGRGF 115
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
SG +KR +F G THG S HR+ GS G PGR++K K MAG MG VT++NL V+
Sbjct: 116 SGVVKRWHFAGGPKTHGQSDRHRAPGSIGSTTTPGRIYKGKHMAGHMGNEAVTIRNLVVL 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
D ++ L++VKG +PG KN+ IL++ + K
Sbjct: 176 KTDAEKNLLMVKGAIPGG-KNTIILIKKTGK 205
>gi|125625143|ref|YP_001033626.1| 50S ribosomal protein L3 [Lactococcus lactis subsp. cremoris
MG1363]
gi|166233151|sp|A2RNQ5|RL3_LACLM RecName: Full=50S ribosomal protein L3
gi|124493951|emb|CAL98946.1| 50S ribosomal protein L3 [Lactococcus lactis subsp. cremoris
MG1363]
gi|300071951|gb|ADJ61351.1| 50S ribosomal protein L3 [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 207
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 83/213 (38%), Positives = 122/213 (57%), Gaps = 6/213 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G IPVTV+ V+ ++++ +GY A QVG +
Sbjct: 1 MSKGILGKKVGMTQIFTDNGELIPVTVIEATPNTVLQVKSVETDGYEATQVGFDTLREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EF+ + + VG+ + F G +VDVTG + GKGF
Sbjct: 61 TNKPAKGHAAKANTTPKRFVREFKGLEGAE---VGAEITVDTFAAGDVVDVTGTSKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH HG S HR GS G +V K KK+AGRMG RVTV+NL +
Sbjct: 118 QGPIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-ANKVPKGKKLAGRMGNKRVTVQNLVIA 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
V ++ +ILVKG VPGAKK S I+V+ + K+
Sbjct: 176 QVLPEKNVILVKGNVPGAKK-SLIVVKSAIKAK 207
>gi|326437537|gb|EGD83107.1| hypothetical protein PTSG_03748 [Salpingoeca sp. ATCC 50818]
Length = 307
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 98/208 (47%), Positives = 142/208 (68%), Gaps = 2/208 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+G++ARKLGMT + + G R+P+T +++ QVV H+T+D++GY A+++GA + + V
Sbjct: 63 RTGILARKLGMTQTFTLWGERVPLTAFQIEDLQVVEHKTVDRDGYSAMRLGAVNLEPRKV 122
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
KP+ G F + PK+ + EFRV + D +LP+G+ S S+F GQ VDV G+TIGKGF
Sbjct: 123 KKPVLGQFRKHKLPPKQHVAEFRVTE-DCILPIGTHISCSHFIPGQYVDVQGVTIGKGFQ 181
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRHNF G+ A+HGV+++HR G G QDPGRV+K K+M GRMGG + L+V
Sbjct: 182 GVMKRHNFKGMPASHGVTLTHRKAGGLGGGQDPGRVWKGKRMEGRMGGVKRYQFGLQVYQ 241
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209
+D + L+ V G PGA KNS + +RD+
Sbjct: 242 IDTRYNLLYVVGSAPGA-KNSIVKIRDA 268
>gi|57234686|ref|YP_181218.1| 50S ribosomal protein L3 [Dehalococcoides ethenogenes 195]
gi|109893425|sp|Q3Z981|RL3_DEHE1 RecName: Full=50S ribosomal protein L3
gi|57225134|gb|AAW40191.1| ribosomal protein L3 [Dehalococcoides ethenogenes 195]
Length = 205
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 76/211 (36%), Positives = 125/211 (59%), Gaps = 6/211 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ +G+ PVT++ C VV +T ++GY AVQ+G G+AK +
Sbjct: 1 MIQGIIGKKIGMTQIFQEDGKAQPVTLVEAGPCVVVQVKTEKQDGYEAVQLGYGKAK--H 58
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++ ++G K+ D + VG + S F G+ +D +G++ G+GF
Sbjct: 59 ITSAVKGQCRGFGE---FKVLREVDVDDIAAVNVGDQITVSDFKDGEKIDASGVSRGRGF 115
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR +F G THG S HR+ GS PGR++K K+MAG MG + VT++NL V+
Sbjct: 116 AGVVKRWHFAGGPKTHGQSDRHRAPGSISSTTTPGRIYKGKRMAGHMGNDAVTIRNLVVL 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
D ++ L++VKG +PG KN+ IL++ + K
Sbjct: 176 KTDAEKNLLMVKGAIPGG-KNTIILIKKTGK 205
>gi|302036665|ref|YP_003796987.1| 50S ribosomal protein L3 [Candidatus Nitrospira defluvii]
gi|300604729|emb|CBK41061.1| 50S ribosomal protein L3 [Candidatus Nitrospira defluvii]
Length = 206
Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 86/212 (40%), Positives = 119/212 (56%), Gaps = 6/212 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M +G++ +KLGMT VY+ PVTV+ C+VV +T +++GY AVQ+ GE K +
Sbjct: 1 MTNGLLGKKLGMTQVYDES-VLAPVTVIEAGPCRVVSVKTKERDGYEAVQLSFGEVKEQR 59
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+S+ G +P + L EF D + VG F G VDV G++ GKGF
Sbjct: 60 LSRGELGHLKKHQAAPSRWLREFPKVGD---VTVGQTVKVDMFKKGDWVDVVGVSKGKGF 116
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G ++RHN+ G THG S+ HR+ GS G P RV+KNK + G MG RVTV+ L+VV
Sbjct: 117 QGVVRRHNYAGGPETHG-SMFHRAPGSIGASSYPSRVWKNKALPGHMGDERVTVQRLKVV 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
L+ V+G VPG N ++VR S KS
Sbjct: 176 DARPDENLLFVRGAVPGGV-NGLLIVRKSKKS 206
>gi|123966973|ref|YP_001012054.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9515]
gi|166233178|sp|A2BYT6|RL3_PROM5 RecName: Full=50S ribosomal protein L3
gi|123201339|gb|ABM72947.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9515]
Length = 217
Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 82/208 (39%), Positives = 129/208 (62%), Gaps = 3/208 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGM+ +++ +G +PVT++ C+V +T +GY A+Q+G G +K K+
Sbjct: 1 MSIGILGKKLGMSQLFDDDGNAVPVTLIEAGPCRVTQLKTQSLDGYTAIQIGYGVSKDKH 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+SKP +G K L EF+V+++ +G + + F VGQ VD++G ++G+GF
Sbjct: 61 LSKPEKGHLLKSGKELLKHLKEFKVEENSS-YEIGKEITVTNFEVGQKVDISGKSMGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
SG KRH F +HG S +HR+ GSTG PGR++ K+MAGR GG ++T K L VV
Sbjct: 120 SGYQKRHGFSRGPMSHG-SKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKKITTKGLLVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
+DD++ L++VKG VPG S + +R
Sbjct: 179 KIDDQKNLLVVKGSVPGKP-GSIVNIRP 205
>gi|119188359|ref|XP_001244786.1| hypothetical protein CIMG_04227 [Coccidioides immitis RS]
Length = 298
Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 98/223 (43%), Positives = 138/223 (61%), Gaps = 3/223 (1%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
+R+G +A K GM+ V + G+R T+L LD +V+ H+T K+GY AVQVGAG
Sbjct: 72 LRTGALAIKKGMSAVIDPETGKRTVCTILQLDRVEVISHKTRQKHGYFAVQVGAGWKHES 131
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
NV+KPM G F++ VSPK+ + EFRV+ + LLPVG + + +F GQ VDV + G G
Sbjct: 132 NVTKPMLGHFAANGVSPKRYVEEFRVRDEAGLLPVGQMINADWFQEGQFVDVRSKSRGMG 191
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ-DPGRVFKNKKMAGRMGGNRVTVKNLE 178
F+G MKR F G +HGVS++HRS G+TG Q RV+ KKMAG MG VT++NL
Sbjct: 192 FTGVMKRWGFHGQDRSHGVSLTHRSLGTTGPSQGGGSRVYPGKKMAGNMGNTPVTIQNLR 251
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
V+ VD ++GL++VKG V G K + + D+ K ++
Sbjct: 252 VLQVDPEKGLVVVKGSV-GGPKGRCVKIHDAIKKPWPETPSLA 293
>gi|256544506|ref|ZP_05471879.1| 50S ribosomal protein L3 [Anaerococcus vaginalis ATCC 51170]
gi|256399831|gb|EEU13435.1| 50S ribosomal protein L3 [Anaerococcus vaginalis ATCC 51170]
Length = 209
Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 87/208 (41%), Positives = 123/208 (59%), Gaps = 3/208 (1%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
+ K+GMT V + +G PVTVL D +V ++ + +GY ++Q+G + K KNV KP
Sbjct: 4 IFTTKVGMTQVIDEDGVVTPVTVLKADENVIVQVKSEEVDGYNSIQIGYHDKKEKNVKKP 63
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
++G F S K+ L E R+ + L G S F G+LVD+T ++ GKG GA+
Sbjct: 64 IKGHFDKAGASYKRFLREVRLDEK-SELNPGDTLSVDQFEEGELVDITAISKGKGTQGAI 122
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR N+G A+HG S SHR G+ DP RVFK +K +G+MG RVTV+NL+VV V+
Sbjct: 123 KRWNYGRGPASHG-SKSHRVAGARAAGSDPARVFKGRKGSGKMGHERVTVQNLKVVKVNT 181
Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212
+ ILVKG VPG K + V+ + KS
Sbjct: 182 EDSYILVKGAVPGP-KGGLVQVKQATKS 208
>gi|323456985|gb|EGB12851.1| hypothetical protein AURANDRAFT_19295 [Aureococcus anophagefferens]
Length = 249
Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 100/222 (45%), Positives = 130/222 (58%), Gaps = 8/222 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+G +A K+GM ++ G+R +TVLH+D C+VV + +GY A+Q+GAG K K+
Sbjct: 2 RTGALAVKVGMLGTWDASGQRHALTVLHVDGCRVVQVKDAATDGYTALQLGAGALKPKHA 61
Query: 62 SKPMRGFFSSVNVSP-------KKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGM 114
G + + D +LP G+ ++F GQLVDV G
Sbjct: 62 PSAHAGHCGAHGGEAVAGTPYELARTLAEFRVSADAVLPPGTRVPAAHFAPGQLVDVRGA 121
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
T GKGF GAMKR NFGG RATHGVS +HR+HGS G Q+PGRVFK KKMAGRMGG T
Sbjct: 122 TRGKGFQGAMKRWNFGGQRATHGVSKTHRAHGSMGGCQNPGRVFKGKKMAGRMGGRNRTA 181
Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
+NL V +D R L+ V+GCVPGA K +W+ V D+ K
Sbjct: 182 QNLTVHKIDTVRDLLFVRGCVPGA-KGTWVRVTDAVKKVTPA 222
>gi|154249817|ref|YP_001410642.1| 50S ribosomal protein L3 [Fervidobacterium nodosum Rt17-B1]
gi|171769379|sp|A7HM52|RL3_FERNB RecName: Full=50S ribosomal protein L3
gi|154153753|gb|ABS60985.1| ribosomal protein L3 [Fervidobacterium nodosum Rt17-B1]
Length = 207
Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 91/207 (43%), Positives = 128/207 (61%), Gaps = 4/207 (1%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ARK+GMT ++ + + +PVTVL C VV +T++K+GY A+Q+G E K ++KP
Sbjct: 4 IIARKVGMTRLW-KDEKVVPVTVLKAGPCVVVQKKTVEKDGYNAIQLGFEEVNEKKLTKP 62
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
M G F NV P + L EFRV+ D VG + + F G +D+TG T G+G+SGAM
Sbjct: 63 MLGVFKKANVKPMRVLKEFRVENVD-QYSVGQEITVAIFQEGDKIDITGWTKGRGYSGAM 121
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR NF G HG HR GS G +P R+FK K+M GR G RVT+ N EVV++D
Sbjct: 122 KRWNFQGGPKAHGAK-FHRELGSVGQHTEPARIFKGKRMPGRYGNERVTILNSEVVTIDA 180
Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211
+ L+ VKG VPGA + S +++R + K
Sbjct: 181 QNNLLAVKGGVPGA-RGSLVIIRSAVK 206
>gi|46579714|ref|YP_010522.1| 50S ribosomal protein L3 [Desulfovibrio vulgaris str.
Hildenborough]
gi|120602809|ref|YP_967209.1| 50S ribosomal protein L3 [Desulfovibrio vulgaris DP4]
gi|81830454|sp|Q72CI0|RL3_DESVH RecName: Full=50S ribosomal protein L3
gi|166233138|sp|A1VEB6|RL3_DESVV RecName: Full=50S ribosomal protein L3
gi|46449129|gb|AAS95781.1| ribosomal protein L3 [Desulfovibrio vulgaris str. Hildenborough]
gi|120563038|gb|ABM28782.1| LSU ribosomal protein L3P [Desulfovibrio vulgaris DP4]
gi|311233505|gb|ADP86359.1| 50S ribosomal protein L3 [Desulfovibrio vulgaris RCH1]
Length = 209
Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 85/205 (41%), Positives = 116/205 (56%), Gaps = 2/205 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ RK+G+T ++ +G + VTV+ C V +T+ +GY A+Q+ EAK K+++K
Sbjct: 6 GILGRKIGVTRIFASDGSAVAVTVIKAGPCPVTQVKTVATDGYDAIQIAFDEAKEKHLNK 65
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P G + + L E R++ VGS + F G V V+G +IGKG+ G
Sbjct: 66 PEIGHLAKAGKGLFRTLREIRLEAPAA-YEVGSELDVTLFATGDRVKVSGTSIGKGYQGV 124
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
M+R NF G + THG HRS GS G PG VFK KKMAG G VTV NLEVV V
Sbjct: 125 MRRWNFAGSKDTHGCEKVHRSGGSIGNNTFPGHVFKGKKMAGHWGNESVTVLNLEVVDVR 184
Query: 184 DKRGLILVKGCVPGAKKNSWILVRD 208
+ +ILVKG VPG KN ++VR
Sbjct: 185 PEDNVILVKGSVPGP-KNGLVMVRK 208
>gi|124003662|ref|ZP_01688510.1| ribosomal protein L3 [Microscilla marina ATCC 23134]
gi|123990717|gb|EAY30184.1| ribosomal protein L3 [Microscilla marina ATCC 23134]
Length = 208
Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 89/209 (42%), Positives = 123/209 (58%), Gaps = 7/209 (3%)
Query: 2 RSGVVARKLGMTCVYNIEG---RRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58
SG++ +K+GMT +Y+ EG ++IP T++ C V +T +GY A+QVG + K
Sbjct: 1 MSGLIGKKIGMTSIYSAEGTVAKQIPCTLIQAGPCVVTQVKTTKNDGYEAIQVGFDDKKE 60
Query: 59 KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
KN KP++G F+ N +PK+KL EF+ KD +L + F G VDV G + GK
Sbjct: 61 KNTPKPLQGHFNKANTTPKRKLVEFQFNKDVEL--GQEITVGDVFEEGDFVDVVGTSKGK 118
Query: 119 GFSGAMKRHNFG-GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
GF G +KRH F ATHG R GS G P RVFK KMAGR G RV ++NL
Sbjct: 119 GFQGVVKRHGFHGVGGATHGQHNRQRHPGSIGAASYPARVFKGLKMAGRTGNKRVKIQNL 178
Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILV 206
+V + ++ LILV G VPGA KNS++++
Sbjct: 179 RIVKIYPEQNLILVSGSVPGA-KNSYVII 206
>gi|78189807|ref|YP_380145.1| 50S ribosomal protein L3 [Chlorobium chlorochromatii CaD3]
gi|109893419|sp|Q3APH3|RL3_CHLCH RecName: Full=50S ribosomal protein L3
gi|78172006|gb|ABB29102.1| LSU ribosomal protein L3P [Chlorobium chlorochromatii CaD3]
Length = 209
Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 88/207 (42%), Positives = 123/207 (59%), Gaps = 1/207 (0%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ +K+GMT ++N + + TV+ +C V + DK GY A QV GE K + VSKP
Sbjct: 4 ILGKKIGMTRLFNEKREAVSCTVIEAGSCFVTQIKRTDKEGYDAYQVSYGERKEQKVSKP 63
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
++G + V+P L EF + + L VGS S F VG+ V+V G++ GKGF+G +
Sbjct: 64 LQGHYKKAGVTPGYTLVEFSFAELNQELAVGSQVSVEGFNVGEKVNVLGVSKGKGFAGVV 123
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR+NFGG THG S R+ GS G DP RVFK +MAGR G +TVKNLE+ V
Sbjct: 124 KRYNFGGGSRTHGQSDRLRAPGSVGGSSDPSRVFKGTRMAGRKGSANITVKNLEIFKVMP 183
Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211
+ LI+VKG +PG NS++ + S K
Sbjct: 184 ESNLIVVKGSIPGP-NNSYVKIISSKK 209
>gi|219113447|ref|XP_002186307.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209583157|gb|ACI65777.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 229
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 104/215 (48%), Positives = 143/215 (66%), Gaps = 5/215 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G + K+GM +++ G R P T+L LDN V+ ++++++GY AVQ+ AG+ K KNV
Sbjct: 16 RCGALGIKVGMMPLFDDWGVRHPCTILFLDNNVVLGQKSIEQHGYWAVQIAAGQRKRKNV 75
Query: 62 SKPMRGFFSSV----NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
+ G + + N +P + EFRV L+PVG+ +F GQ VDV+G++ G
Sbjct: 76 GVSVLGQYKHILEDENENPPYLVREFRVSDGAHLVPVGARIHARHFVPGQNVDVSGISKG 135
Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
KGF GAMKRHNFGG+ A+HGVS SHR+ GSTG QDPG+VFK KKMAGRMG RVTV+NL
Sbjct: 136 KGFQGAMKRHNFGGMPASHGVSKSHRALGSTGQCQDPGKVFKGKKMAGRMGTERVTVQNL 195
Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VV VD R L+ ++G VPG K +++ +RD+ K
Sbjct: 196 RVVKVDRGRNLLFLEGAVPG-NKGAFVEIRDAVKK 229
>gi|270307842|ref|YP_003329900.1| ribosomal protein L3 [Dehalococcoides sp. VS]
gi|270153734|gb|ACZ61572.1| ribosomal protein L3 [Dehalococcoides sp. VS]
Length = 205
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 76/211 (36%), Positives = 125/211 (59%), Gaps = 6/211 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ +G+ PVT++ C VV +T ++GY AVQ+G G+AK +
Sbjct: 1 MIQGIIGKKIGMTQIFQEDGKAQPVTLVEAGPCVVVQVKTEKQDGYEAVQLGYGKAK--H 58
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++ ++G K+ D + VG + S F G+ +D +G++ G+GF
Sbjct: 59 ITSAVKGQCRGFGE---FKVLREVDVDDIATVNVGDQITVSDFKDGEKIDASGVSRGRGF 115
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR +F G THG S HR+ GS PGR++K K+MAG MG + VT++NL V+
Sbjct: 116 AGVVKRWHFAGGPKTHGQSDRHRAPGSISSTTTPGRIYKGKRMAGHMGNDAVTIRNLVVL 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
D ++ L++VKG +PG KN+ IL++ + K
Sbjct: 176 KTDAEKNLLMVKGAIPGG-KNTIILIKKTGK 205
>gi|283768462|ref|ZP_06341374.1| 50S ribosomal protein L3 [Bulleidia extructa W1219]
gi|283104854|gb|EFC06226.1| 50S ribosomal protein L3 [Bulleidia extructa W1219]
Length = 252
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 78/214 (36%), Positives = 115/214 (53%), Gaps = 4/214 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RKLGMT V+ I+G IPVTV+ + V+ +T + +GY AVQ+G + K +
Sbjct: 1 MKGILGRKLGMTQVFTIDGTLIPVTVIDVKPNVVLQKKTKETDGYEAVQLGYEDVKEQRS 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G N +PKK + E R + VG+ F G +VDV G + GKG+S
Sbjct: 61 NKPAIGHAKKANTAPKKYIKEIRADEM-MNFEVGAEVKADLFKAGDVVDVQGTSKGKGYS 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQ-DPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G + R+N +HG S HR GS + G V K M G+ GG T +NL+V+
Sbjct: 120 GTIVRNNAARGPMSHG-SGHHRHIGSLATNGRNNGVVNKGTAMPGQEGGYTTTNQNLQVI 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VD + G ILVKG +PG +K ++++ + K
Sbjct: 179 KVDAEEGYILVKGNIPGPRKG-LVVIKTTVKPVK 211
>gi|303316364|ref|XP_003068184.1| 54S ribosomal protein L9, mitochondrial precursor, putative
[Coccidioides posadasii C735 delta SOWgp]
gi|240107865|gb|EER26039.1| 54S ribosomal protein L9, mitochondrial precursor, putative
[Coccidioides posadasii C735 delta SOWgp]
gi|320037921|gb|EFW19857.1| 50S ribosomal protein L3 [Coccidioides posadasii str. Silveira]
Length = 291
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 97/217 (44%), Positives = 136/217 (62%), Gaps = 3/217 (1%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
+R+G +A K GM+ V + G+R T+L LD +V+ H+T K+GY AVQVGAG
Sbjct: 72 LRTGALAIKKGMSAVIDPETGKRTVCTILQLDRVEVISHKTRQKHGYFAVQVGAGWKHES 131
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
NV+KPM G F++ VSPK+ + EFRV+ + LLP+G + + +F GQ VDV + G G
Sbjct: 132 NVTKPMLGHFAANGVSPKRYVEEFRVRDEAGLLPIGQMINADWFQEGQFVDVRSKSRGMG 191
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ-DPGRVFKNKKMAGRMGGNRVTVKNLE 178
F+G MKR F G +HGVS++HRS G+TG Q RV+ KKMAG MG VT++NL
Sbjct: 192 FTGVMKRWGFHGQDRSHGVSLTHRSLGTTGPSQGGGSRVYPGKKMAGNMGNTPVTIQNLR 251
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
V+ VD ++GL++VKG V G K + + D+ K
Sbjct: 252 VLQVDPEKGLVVVKGSV-GGPKGRCVKIHDAIKKPWP 287
>gi|283853153|ref|ZP_06370406.1| ribosomal protein L3 [Desulfovibrio sp. FW1012B]
gi|283571411|gb|EFC19418.1| ribosomal protein L3 [Desulfovibrio sp. FW1012B]
Length = 210
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 85/205 (41%), Positives = 117/205 (57%), Gaps = 2/205 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ RKLGMT ++ +G IPVTV+ C V +T +K+GY A+Q+G + + V+K
Sbjct: 6 GILGRKLGMTRIFGDDGSIIPVTVIEAGPCPVTQVKTAEKDGYNAMQIGFDQIPERKVNK 65
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P +G + L E R+ + F G+ V VTG +IGKGF+G
Sbjct: 66 PEKGHLDKAGRGYYRVLKEIRLDGPSAFEQGMD-VTVDIFAPGETVKVTGTSIGKGFAGV 124
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
MKR NF GL+ THG +HRS GS G +PG+V K KKMAG MG VT+ +E+V V
Sbjct: 125 MKRWNFAGLKKTHGTEKAHRSGGSIGNNTEPGKVMKGKKMAGHMGARTVTMLGIEIVDVR 184
Query: 184 DKRGLILVKGCVPGAKKNSWILVRD 208
+ LILVKG VPG +N ++VR
Sbjct: 185 PEMNLILVKGQVPGP-RNCVVMVRK 208
>gi|196228455|ref|ZP_03127322.1| ribosomal protein L3 [Chthoniobacter flavus Ellin428]
gi|196227858|gb|EDY22361.1| ribosomal protein L3 [Chthoniobacter flavus Ellin428]
Length = 215
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 89/208 (42%), Positives = 129/208 (62%), Gaps = 3/208 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ G++ +K+GMT VY+ +G+ PVTV+ V+ +T + +GY+ VQVG K +
Sbjct: 1 MKIGLLGKKIGMTRVYDDKGKATPVTVIEAGGNTVLQTKTQENDGYVGVQVGFDVQKEQR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V++P+ G F PKK + EFR+ DD L S S F VG +VDV G + GKGF
Sbjct: 61 VTQPLLGHFKKAGSEPKKLVKEFRL-PDDVKLDGALDLSVSQFAVGDVVDVIGRSKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +++HN G A+HG S+ HR +G+ G R PGR++KN M G MG RVTV+NL+VV
Sbjct: 120 QGVIRKHNMAGQGASHG-SMMHRRNGAIGNRSTPGRIWKNMGMPGHMGDERVTVQNLKVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
V + G+IL+ G VPGA ++I++R
Sbjct: 179 QVRPEEGVILISGAVPGA-NGTYIVIRP 205
>gi|297170808|gb|ADI21828.1| ribosomal protein L3 [uncultured gamma proteobacterium
HF0130_25M15]
Length = 305
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 86/218 (39%), Positives = 129/218 (59%), Gaps = 2/218 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K GMT V+ +GR +PVT++ + + +T +GY A+QV G+
Sbjct: 1 MIGIVGKKCGMTRVFTDDGRSVPVTIVQANPNLINRIKTEATDGYDAIQVLTGQTTKNPK 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++ N KL EFR+ ++ + + G + YF G+LVDV+G +IGKG+
Sbjct: 61 KPDSGQIKTNPNEKLSHKLHEFRLNANELEQVDTGKEITVDYFEKGELVDVSGNSIGKGY 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KRHNF ATHG S++HR+ GS G Q PGRVFK KKMAGRMG + T++NLEV+
Sbjct: 121 AGVIKRHNFKTQDATHGNSLAHRAPGSIGQNQTPGRVFKGKKMAGRMGNVKKTMQNLEVI 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+D R LI +KG + G +NS++++ S KS +
Sbjct: 181 DIDSDRNLIFIKGSIAG-HENSFVVITPSIKSEKKERE 217
>gi|15805340|ref|NP_294034.1| 50S ribosomal protein L3 [Deinococcus radiodurans R1]
gi|42559707|sp|Q9RXK2|RL3_DEIRA RecName: Full=50S ribosomal protein L3
gi|28948921|pdb|1NKW|B Chain B, Crystal Structure Of The Large Ribosomal Subunit From
Deinococcus Radiodurans
gi|29726789|pdb|1NWX|B Chain B, Complex Of The Large Ribosomal Subunit From Deinococcus
Radiodurans With Abt-773
gi|29726820|pdb|1NWY|B Chain B, Complex Of The Large Ribosomal Subunit From Deinococcus
Radiodurans With Azithromycin
gi|51247374|pdb|1SM1|B Chain B, Complex Of The Large Ribosomal Subunit From Deinococcus
Radiodurans With Quinupristin And Dalfopristin
gi|61680337|pdb|1XBP|B Chain B, Inhibition Of Peptide Bond Formation By Pleuromutilins:
The Structure Of The 50s Ribosomal Subunit From
Deinococcus Radiodurans In Complex With Tiamulin
gi|146386617|pdb|2OGM|B Chain B, The Crystal Structure Of The Large Ribosomal Subunit From
Deinococcus Radiodurans Complexed With The Pleuromutilin
Derivative Sb-571519
gi|146386619|pdb|2OGN|B Chain B, The Crystal Structure Of The Large Ribosomal Subunit From
Deinococcus Radiodurans Complexed With The Pleuromutilin
Derivative Sb-280080
gi|146386621|pdb|2OGO|B Chain B, The Crystal Structure Of The Large Ribosomal Subunit From
Deinococcus Radiodurans Complexed With The Pleuromutilin
Derivative Retapamulin (Sb-275833)
gi|190613491|pdb|2ZJP|B Chain B, Thiopeptide Antibiotic Nosiheptide Bound To The Large
Ribosomal Subunit Of Deinococcus Radiodurans
gi|190613521|pdb|2ZJQ|B Chain B, Interaction Of L7 With L11 Induced By Microccocin Binding
To The Deinococcus Radiodurans 50s Subunit
gi|190613552|pdb|2ZJR|B Chain B, Refined Native Structure Of The Large Ribosomal Subunit
(50s) From Deinococcus Radiodurans
gi|190613659|pdb|3CF5|B Chain B, Thiopeptide Antibiotic Thiostrepton Bound To The Large
Ribosomal Subunit Of Deinococcus Radiodurans
gi|203282458|pdb|3DLL|B Chain B, The Oxazolidinone Antibiotics Perturb The Ribosomal
Peptidyl-Transferase Center And Effect Trna Positioning
gi|323714542|pdb|3PIO|B Chain B, Crystal Structure Of The Synergistic Antibiotic Pair
Lankamycin And Lankacidin In Complex With The Large
Ribosomal Subunit
gi|323714572|pdb|3PIP|B Chain B, Crystal Structure Of The Synergistic Antibiotic Pair
Lankamycin And Lankacidin In Complex With The Large
Ribosomal Subunit
gi|6457985|gb|AAF09892.1|AE001892_3 ribosomal protein L3 [Deinococcus radiodurans R1]
Length = 211
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 88/204 (43%), Positives = 116/204 (56%), Gaps = 6/204 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ K+GMT ++ R IPVTV+ C +V +T +GY AVQ+G + V
Sbjct: 1 MKGILGTKIGMTQIW-KNDRAIPVTVVLAGPCPIVQRKTAQTDGYEAVQIGYAPKAERKV 59
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KPM+G F+ V+P + L EFR D G + F G+ +D TG + GKG
Sbjct: 60 NKPMQGHFAKAGVAPTRILREFRGFAPD-----GDSVNVDIFAEGEKIDATGTSKGKGTQ 114
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR NF G A+HG HR GS G R+ PGRV+K K+MAG MG RVTV+NLEVV
Sbjct: 115 GVMKRWNFAGGPASHGSKKWHRRPGSIGQRKTPGRVYKGKRMAGHMGMERVTVQNLEVVE 174
Query: 182 VDDKRGLILVKGCVPGAKKNSWIL 205
+ LILVKG +PGA +L
Sbjct: 175 IRAGENLILVKGAIPGANGGLVVL 198
>gi|328953158|ref|YP_004370492.1| 50S ribosomal protein L3 [Desulfobacca acetoxidans DSM 11109]
gi|328453482|gb|AEB09311.1| 50S ribosomal protein L3 [Desulfobacca acetoxidans DSM 11109]
Length = 208
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 80/205 (39%), Positives = 118/205 (57%), Gaps = 2/205 (0%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ RKLGMT +++ EG +PVTV+ C +V ++L +GY AVQVG ++ ++KP
Sbjct: 5 LLGRKLGMTRIFSAEGVALPVTVIEAGPCYIVQKKSLAADGYDAVQVGFIRKRLDKLTKP 64
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
++G + + + + L VG S F +G+ VDV G + G+GF+G +
Sbjct: 65 LQGHYEKHGFKSGFRFLKEFRLESISDLEVGQELDVSQFEIGERVDVVGFSKGRGFAGVI 124
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR F THG S+SHR+ GS G P RVFK KK+ GRMG RVT LEVV V
Sbjct: 125 KRWGFQRGPETHG-SMSHRAPGSIGASAYPSRVFKGKKLPGRMGNARVTTLTLEVVDVRP 183
Query: 185 KRGLILVKGCVPGAKKNSWILVRDS 209
+ L+++KG VPGA+ +L++ S
Sbjct: 184 ESNLLILKGAVPGARHG-LLLIKKS 207
>gi|295099237|emb|CBK88326.1| LSU ribosomal protein L3P [Eubacterium cylindroides T2-87]
Length = 231
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 81/223 (36%), Positives = 117/223 (52%), Gaps = 7/223 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RKLGMT V+ +G IPVTV+ V+ +T +GY AVQ+G E K K
Sbjct: 1 MKGLLGRKLGMTQVFTEDGVLIPVTVVEATPNVVLQKKTAQSDGYDAVQLGFEEIKEKRT 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+K G N SPK+ + E V+ D + VG + + F G+ VDV G + GKG++
Sbjct: 61 TKANIGHCKKANTSPKRFIKE--VRNCDMEVNVGDLIDVTIFAAGETVDVIGTSKGKGYN 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQ---DPGRVFKNKKMAGRMGGNRVTVKNLE 178
G + R+N +HG S + R GS GR+ K MAG+ GG T NL
Sbjct: 119 GTIVRNNAHQGPKSHGGSKNIRHIGSLATNGITSRQGRIMKGTIMAGQEGGYTTTNPNLT 178
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
V+ VD + +L+KG VPG KK ++VR + K++ K V+
Sbjct: 179 VIKVDKENNYLLIKGNVPGPKKG-LVMVRTA-KTSKGDKEPVT 219
>gi|71894653|ref|YP_278761.1| 50S ribosomal protein L3 [Mycoplasma synoviae 53]
gi|109893527|sp|Q4A5C1|RL3_MYCS5 RecName: Full=50S ribosomal protein L3
gi|71851441|gb|AAZ44050.1| 50S ribosomal protein L3 [Mycoplasma synoviae 53]
Length = 268
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 86/221 (38%), Positives = 122/221 (55%), Gaps = 7/221 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT +Y+ G IPVTV+ + V T NGY AVQ+ + + K
Sbjct: 1 MKGILGRKVGMTQIYSETGTAIPVTVIEVKPNVVTKVLTKQSNGYEAVQLSVFDKREKLS 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F N +PK+ + E R +G + F+VG+LVDV+G + GKGF+
Sbjct: 61 NKPETGHFKKANTTPKRFVKEIRNMNG---YELGQSVLVNIFSVGELVDVSGTSKGKGFA 117
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP--GRVFKNKKMAGRMGGNRVTVKNLEV 179
GA+KR+N +HG + TG D RVFK M G +G + T++NLEV
Sbjct: 118 GAIKRYNQHIGPKSHGGGGGSQPIRQTGSLGDISGNRVFKGMTMPGHLGSEKATLQNLEV 177
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
V VD K L+LVKG VPGA KNS+++V+ + K + K V
Sbjct: 178 VKVDLKENLLLVKGSVPGA-KNSFVVVKSAVKG-LPAKAAV 216
>gi|269798550|ref|YP_003312450.1| ribosomal protein L3 [Veillonella parvula DSM 2008]
gi|282849864|ref|ZP_06259247.1| 50S ribosomal protein L3 [Veillonella parvula ATCC 17745]
gi|294792794|ref|ZP_06757941.1| 50S ribosomal protein L3 [Veillonella sp. 6_1_27]
gi|294794548|ref|ZP_06759684.1| 50S ribosomal protein L3 [Veillonella sp. 3_1_44]
gi|313893076|ref|ZP_07826653.1| 50S ribosomal protein L3 [Veillonella sp. oral taxon 158 str.
F0412]
gi|269095179|gb|ACZ25170.1| ribosomal protein L3 [Veillonella parvula DSM 2008]
gi|282580301|gb|EFB85701.1| 50S ribosomal protein L3 [Veillonella parvula ATCC 17745]
gi|294454878|gb|EFG23251.1| 50S ribosomal protein L3 [Veillonella sp. 3_1_44]
gi|294456693|gb|EFG25056.1| 50S ribosomal protein L3 [Veillonella sp. 6_1_27]
gi|313442429|gb|EFR60844.1| 50S ribosomal protein L3 [Veillonella sp. oral taxon 158 str.
F0412]
Length = 213
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 98/216 (45%), Positives = 132/216 (61%), Gaps = 5/216 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M ++ +KLGMT V+ EG+ +PVTV+ VV +T++ +GY AVQ+G G K K+
Sbjct: 1 MSKAILGKKLGMTQVFTAEGQLVPVTVVETTPSVVVRVKTVETDGYEAVQIGYGSIKEKH 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP++G F V+P K L E RV D VG + F G+LVDV G GKGF
Sbjct: 61 LTKPVKGQFDKAGVAPVKYLREVRVANAAD-YTVGQTLAADIFAEGELVDVVGTGKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
+G +KRHNF THG S SHR GS G G+V+K KK+ G+MGG RVTV+ L
Sbjct: 120 AGTIKRHNFSRGPETHG-SKSHREPGSIGPMISGGGGKVYKGKKLPGQMGGYRVTVQRLS 178
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VV VD +R L+LVKG +PGA K S ++VR++ K
Sbjct: 179 VVKVDAERNLLLVKGGIPGA-KGSLVMVRNTVKPVK 213
>gi|303237517|ref|ZP_07324082.1| 50S ribosomal protein L3 [Prevotella disiens FB035-09AN]
gi|302482337|gb|EFL45367.1| 50S ribosomal protein L3 [Prevotella disiens FB035-09AN]
Length = 204
Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats.
Identities = 83/203 (40%), Positives = 119/203 (58%), Gaps = 4/203 (1%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G GEAK SK
Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTIEKDGYKAVQLGFGEAKESRTSK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P +G F +PKK L EF K D+ +G + F + VDV G + GKGF G
Sbjct: 63 PQQGHFKKAGTTPKKHLAEF---KFDEEYNLGDTITVELFNDTKFVDVVGTSKGKGFQGV 119
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F G ++THG R GS G P +VFK +M G MGG+ VT +NL+V+ V
Sbjct: 120 MKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGHMGGDTVTTQNLQVLKV 179
Query: 183 DDKRGLILVKGCVPGAKKNSWIL 205
+ ++LVKG V G ++ I+
Sbjct: 180 IPEHNILLVKGSVAGCNGSTLII 202
>gi|31981470|ref|NP_444389.2| 39S ribosomal protein L3, mitochondrial [Mus musculus]
gi|17865553|sp|Q99N95|RM03_MOUSE RecName: Full=39S ribosomal protein L3, mitochondrial; Short=L3mt;
Short=MRP-L3
gi|13559357|dbj|BAB40838.1| mitochondrial ribosomal protein L3 (L3mt) [Mus musculus]
gi|22028310|gb|AAH34877.1| Mitochondrial ribosomal protein L3 [Mus musculus]
gi|26346775|dbj|BAC37036.1| unnamed protein product [Mus musculus]
gi|74141933|dbj|BAE41032.1| unnamed protein product [Mus musculus]
gi|74216950|dbj|BAE26589.1| unnamed protein product [Mus musculus]
gi|148689151|gb|EDL21098.1| mitochondrial ribosomal protein L3, isoform CRA_c [Mus musculus]
Length = 348
Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats.
Identities = 75/220 (34%), Positives = 111/220 (50%), Gaps = 5/220 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNG--YMAVQVGAGEAKVK 59
R G++A KLGM ++ +G++ VT+L + +C V+ + + + A+ VG
Sbjct: 96 RVGLIALKLGMMPLWTKDGQKHAVTLLQVQDCHVLKYTPKEDHNGKIAALTVGGKTVSRF 155
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
F+ + + PK+ F V D+ ++ G+ ++F GQ VDVT TIGKG
Sbjct: 156 YKPDSRLEFYRDLGLPPKQIHKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGKG 214
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G MKR F G A+HG + +HR G+ D RV+ KM GRMG TV L+V
Sbjct: 215 FQGVMKRWGFKGQPASHGQTKTHRRPGAIST-GDIARVWPGTKMPGRMGNQNRTVYGLKV 273
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
V+ K +I V G VPG KN + ++DS A K
Sbjct: 274 WRVNTKHNIIYVNGSVPG-HKNCLVKIKDSTLPAYKDSCK 312
>gi|298531085|ref|ZP_07018486.1| 50S ribosomal protein L3 [Desulfonatronospira thiodismutans ASO3-1]
gi|298509108|gb|EFI33013.1| 50S ribosomal protein L3 [Desulfonatronospira thiodismutans ASO3-1]
Length = 210
Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats.
Identities = 83/204 (40%), Positives = 118/204 (57%), Gaps = 1/204 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +KLGMT V++ +G+ IPVTV+ C V+ + DK+GY A+Q+G +
Sbjct: 4 TIGLIGKKLGMTSVFSDDGKFIPVTVIQAGPCPVIQKKDQDKDGYSAIQIGYDSMPGHKL 63
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+RG + +KL EF + ++ G + F G + +TG + GKGF+
Sbjct: 64 NKPVRGHQAKAGKGFFRKLTEFSPENVEE-FEPGQELNVEIFKPGDRIKLTGTSKGKGFA 122
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR NF GL THG HRS G+ G DPG+VFK KKM GRMG V+ KN E++S
Sbjct: 123 GVMKRWNFRGLPRTHGHEKVHRSPGAIGQCADPGKVFKGKKMPGRMGNKTVSYKNAEIIS 182
Query: 182 VDDKRGLILVKGCVPGAKKNSWIL 205
V + +ILVKG VPG + +L
Sbjct: 183 VRTQDNVILVKGQVPGPRNGYVVL 206
>gi|209528437|ref|ZP_03276868.1| ribosomal protein L3 [Arthrospira maxima CS-328]
gi|209491125|gb|EDZ91549.1| ribosomal protein L3 [Arthrospira maxima CS-328]
Length = 229
Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats.
Identities = 79/226 (34%), Positives = 122/226 (53%), Gaps = 20/226 (8%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
M G++ KLGMT V++ G+ IPVTV+ C + +T +GY A+Q+G GE K
Sbjct: 1 MSVGILGTKLGMTQVFDAETGKAIPVTVVQAGPCTITQVKTEATDGYTAIQLGYGEVPNK 60
Query: 60 ----------------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103
+S +G + N + L E+R++ D+ +G F
Sbjct: 61 TRKLNTRKSPDKEVNKYLSHAEQGHLTKSNSPLVRHLKEYRLESTDN-FELGQEIKVDTF 119
Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163
+GQ+VDVTG+++G+GF+G KR+NF HG S +HR GS G PGRV+ KKM
Sbjct: 120 ELGQMVDVTGISMGRGFAGNQKRNNFRRGPMAHG-SKNHRLPGSIGPGTTPGRVYPGKKM 178
Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
AGR GG ++T + L +V +D +R L+L+KG +PG + ++ +
Sbjct: 179 AGRYGGKQITTRKLTIVRIDLERNLLLIKGSIPGKP-GGLLNIKPA 223
>gi|228898863|ref|ZP_04063145.1| 50S ribosomal protein L3 [Bacillus thuringiensis IBL 4222]
gi|228905907|ref|ZP_04069804.1| 50S ribosomal protein L3 [Bacillus thuringiensis IBL 200]
gi|228937413|ref|ZP_04100059.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228963210|ref|ZP_04124379.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228976869|ref|ZP_04137281.1| 50S ribosomal protein L3 [Bacillus thuringiensis Bt407]
gi|229009619|ref|ZP_04166845.1| 50S ribosomal protein L3 [Bacillus mycoides DSM 2048]
gi|229015512|ref|ZP_04172510.1| 50S ribosomal protein L3 [Bacillus cereus AH1273]
gi|229021721|ref|ZP_04178303.1| 50S ribosomal protein L3 [Bacillus cereus AH1272]
gi|229027958|ref|ZP_04184111.1| 50S ribosomal protein L3 [Bacillus cereus AH1271]
gi|229074171|ref|ZP_04207217.1| 50S ribosomal protein L3 [Bacillus cereus Rock4-18]
gi|229083430|ref|ZP_04215778.1| 50S ribosomal protein L3 [Bacillus cereus Rock3-44]
gi|229094832|ref|ZP_04225837.1| 50S ribosomal protein L3 [Bacillus cereus Rock3-29]
gi|229100909|ref|ZP_04231713.1| 50S ribosomal protein L3 [Bacillus cereus Rock3-28]
gi|229113786|ref|ZP_04243221.1| 50S ribosomal protein L3 [Bacillus cereus Rock1-3]
gi|229165098|ref|ZP_04292893.1| 50S ribosomal protein L3 [Bacillus cereus AH621]
gi|229170961|ref|ZP_04298562.1| 50S ribosomal protein L3 [Bacillus cereus MM3]
gi|228612501|gb|EEK69722.1| 50S ribosomal protein L3 [Bacillus cereus MM3]
gi|228618361|gb|EEK75391.1| 50S ribosomal protein L3 [Bacillus cereus AH621]
gi|228669657|gb|EEL25064.1| 50S ribosomal protein L3 [Bacillus cereus Rock1-3]
gi|228682488|gb|EEL36561.1| 50S ribosomal protein L3 [Bacillus cereus Rock3-28]
gi|228688575|gb|EEL42448.1| 50S ribosomal protein L3 [Bacillus cereus Rock3-29]
gi|228699863|gb|EEL52500.1| 50S ribosomal protein L3 [Bacillus cereus Rock3-44]
gi|228708941|gb|EEL61068.1| 50S ribosomal protein L3 [Bacillus cereus Rock4-18]
gi|228733346|gb|EEL84175.1| 50S ribosomal protein L3 [Bacillus cereus AH1271]
gi|228739589|gb|EEL90003.1| 50S ribosomal protein L3 [Bacillus cereus AH1272]
gi|228745799|gb|EEL95803.1| 50S ribosomal protein L3 [Bacillus cereus AH1273]
gi|228751641|gb|EEM01441.1| 50S ribosomal protein L3 [Bacillus mycoides DSM 2048]
gi|228782839|gb|EEM31005.1| 50S ribosomal protein L3 [Bacillus thuringiensis Bt407]
gi|228796468|gb|EEM43907.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar sotto str.
T04001]
gi|228822246|gb|EEM68228.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228853722|gb|EEM98482.1| 50S ribosomal protein L3 [Bacillus thuringiensis IBL 200]
gi|228860763|gb|EEN05141.1| 50S ribosomal protein L3 [Bacillus thuringiensis IBL 4222]
Length = 199
Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats.
Identities = 88/203 (43%), Positives = 125/203 (61%), Gaps = 4/203 (1%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
MT V+ G IPVTV+ + V+ +T + +GY A+Q+G + + K +KP +G +
Sbjct: 1 MTQVFAENGELIPVTVIAANPNVVLQKKTTETDGYNAIQLGFEDKREKLTNKPEQGHTAK 60
Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
+ +PK+ + E R D D L VG F G++VDVTG++ GKGF G +KRH
Sbjct: 61 ASTTPKRFIREIR-DADVDGLEVGQEVKVEVFAAGEIVDVTGISKGKGFQGVIKRHGQSR 119
Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
+HG S HR GS G P RVFK KK+AGRMGG++VT++NLE+V VD +R L+LV
Sbjct: 120 GPMSHG-SRYHRRPGSMGPVA-PNRVFKGKKLAGRMGGDQVTIQNLEIVQVDTERNLLLV 177
Query: 192 KGCVPGAKKNSWILVRDSFKSAV 214
KG VPGAKK S ++V+ + K +
Sbjct: 178 KGNVPGAKK-SLVVVQGAVKVSK 199
>gi|254442313|ref|ZP_05055789.1| ribosomal protein L3 [Verrucomicrobiae bacterium DG1235]
gi|198256621|gb|EDY80929.1| ribosomal protein L3 [Verrucomicrobiae bacterium DG1235]
Length = 201
Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats.
Identities = 84/203 (41%), Positives = 116/203 (57%), Gaps = 2/203 (0%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
MT VY + + +PVTVL C V+ +T++ +GY A+Q+G K KN SK G
Sbjct: 1 MTQVYGSDNQVVPVTVLQAGPCPVLQVKTVESDGYNAIQIGFDSKKDKNASKAAIGHAKK 60
Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
V+ ++ + G V S F VG+ VDV G T GKGF+G MKR N G
Sbjct: 61 AGVAHAPRVIREVRSPEAIDATAGDVLDVSKFEVGKKVDVIGNTKGKGFAGVMKRFNTKG 120
Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
A+HG S+ HR GS G Q PG VFKN+KM G MG + T++NLE+VS+D ++ LILV
Sbjct: 121 GPASHG-SMFHRRIGSIGLCQWPGHVFKNQKMPGHMGAKQRTIQNLEIVSIDAEKNLILV 179
Query: 192 KGCVPGAKKNSWILVRDSFKSAV 214
KG +PGA +++R + K+
Sbjct: 180 KGGIPGA-NGDTVMIRSAIKAKK 201
>gi|15029810|gb|AAH11128.1| Mitochondrial ribosomal protein L3 [Mus musculus]
Length = 348
Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats.
Identities = 75/220 (34%), Positives = 111/220 (50%), Gaps = 5/220 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNG--YMAVQVGAGEAKVK 59
R G++A KLGM ++ +G++ VT+L + +C V+ + + + A+ VG
Sbjct: 96 RVGLIALKLGMMPLWTKDGQKHAVTLLQVQDCHVLKYTPKEDHNGKIAALTVGGKTVSRF 155
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
F+ + + PK+ F V D+ ++ G+ ++F GQ VDVT TIGKG
Sbjct: 156 YKPDSRLEFYRDLGLPPKQIHKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGKG 214
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G MKR F G A+HG + +HR G+ D RV+ KM GRMG TV L+V
Sbjct: 215 FQGVMKRWGFKGQPASHGQTKTHRRPGAIST-GDIARVWPGTKMPGRMGNQNRTVYGLKV 273
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
V+ K +I V G VPG KN + ++DS A K
Sbjct: 274 WRVNTKHNIIYVNGSVPG-HKNCLVKIKDSTLPAYKDSCK 312
>gi|291567784|dbj|BAI90056.1| 50S ribosomal protein L3 [Arthrospira platensis NIES-39]
Length = 229
Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats.
Identities = 81/226 (35%), Positives = 122/226 (53%), Gaps = 20/226 (8%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
M G++ KLGMT V++ G+ IPVTV+ C + +T +GY A+Q+G GE K
Sbjct: 1 MSVGILGTKLGMTQVFDTETGKAIPVTVVQAGPCTITQVKTEATDGYTAIQLGYGEVPNK 60
Query: 60 ----------------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103
+S +G + N + L E+R++ D+ +G F
Sbjct: 61 TRKLNTRKSPDKEVNKYLSHAEQGHLTKSNSPLVRHLKEYRLESTDN-FELGQEVKVDAF 119
Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163
GQ+VDVTG+++G+GF+G KR+NF HG S +HR GS G PGRV+ KKM
Sbjct: 120 EPGQIVDVTGISMGRGFAGNQKRNNFRRGPMAHG-SKNHRLPGSIGPGTTPGRVYPGKKM 178
Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
AGR GG ++T + L +V VD +R L+L+KG +PG K + ++ +
Sbjct: 179 AGRYGGKQITTRKLTIVRVDLERNLLLIKGSIPG-KTGGLLNIKPA 223
>gi|114567841|ref|YP_754995.1| 50S ribosomal protein L3 [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|122317284|sp|Q0AUI0|RL3_SYNWW RecName: Full=50S ribosomal protein L3
gi|114338776|gb|ABI69624.1| LSU ribosomal protein L3P [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 212
Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats.
Identities = 85/212 (40%), Positives = 126/212 (59%), Gaps = 4/212 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
+ ++ K+GMT +++ + +PV+++ C V+ + ++ +GY ++QVG K K
Sbjct: 5 KKAIMGIKIGMTQIFDENDKAVPVSIIEAGPCTVLQKKKVESDGYESIQVGFYNLKEKLA 64
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP RG F NV P + + EFR+ DD VG + FT G LVDV G + GKGF+
Sbjct: 65 NKPARGHFKKANVKPLRYIKEFRIDNVDD-YDVGQEITADIFTTGDLVDVIGTSKGKGFA 123
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRHNF HG S HR GS G + P RVFK +K+ GR+GG RVTV+ L+VV
Sbjct: 124 GGVKRHNFARGSMGHG-SKYHRRPGSLG-AKGPARVFKGRKLPGRLGGERVTVQGLKVVK 181
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
V R LIL+KG +PG K ++++++S K
Sbjct: 182 VYPDRNLILIKGSIPGP-KRGFVIIKNSVKEK 212
>gi|295698649|ref|YP_003603304.1| ribosomal protein L3 [Candidatus Riesia pediculicola USDA]
gi|291157291|gb|ADD79736.1| ribosomal protein L3 [Candidatus Riesia pediculicola USDA]
Length = 208
Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats.
Identities = 85/209 (40%), Positives = 126/209 (60%), Gaps = 1/209 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT ++ G IP+TV+ ++ +V L KNGY +VQV +G K K +
Sbjct: 1 MIGLIGKKIGMTRIFMKNGMAIPITVIQVEENRVTQVGILKKNGYRSVQVTSGIKKHKFL 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
GFF + V P K L EF+ ++ +G S+ + + +D++ + GKGF
Sbjct: 61 KSSEIGFFKKIVVDPGKILKEFKTNATNENYHIGQKIHLSFLSKFKRIDISSFSKGKGFC 120
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF A+HG S+SHR GS G Q PGRVFK KKMAG MG +VT+K LE++
Sbjct: 121 GTIKRWNFKAQDASHGNSLSHRVPGSIGQNQTPGRVFKGKKMAGHMGNKKVTMKKLEIIQ 180
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
+D+K+GLILVKG VPG N ++++ +
Sbjct: 181 IDEKKGLILVKGSVPGG-TNCNLIIKPTV 208
>gi|222099967|ref|YP_002534535.1| 50S ribosomal protein L3 [Thermotoga neapolitana DSM 4359]
gi|221572357|gb|ACM23169.1| 50S ribosomal protein L3 [Thermotoga neapolitana DSM 4359]
Length = 210
Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats.
Identities = 91/210 (43%), Positives = 123/210 (58%), Gaps = 6/210 (2%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ RK+GMT V+ +PVTV+ C VV +T++ +GY AVQ+G +AK V+KP
Sbjct: 7 IIGRKIGMTRVFIGN-EAVPVTVIKAGPCVVVQKKTVETDGYNAVQLGFEKAKK--VNKP 63
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+ G F V P + L EFRV D+ G V F G+ VDVTG + G+GF+GAM
Sbjct: 64 LAGHFKKFGVEPMRVLREFRVDNPDE-YEPGQVIKVDIFEKGEYVDVTGWSKGRGFAGAM 122
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR F G +HG S HR GS G +P +++K KKM GR G RVTV+NL+VV VD
Sbjct: 123 KRWGFSGGPKSHG-SKFHRELGSVGQHTEPAKIWKGKKMPGRYGNERVTVRNLQVVDVDP 181
Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
+ LI VKG VPGA + +L+R +
Sbjct: 182 ENDLIAVKGGVPGA-RGGLVLIRSAKAPKK 210
>gi|284052648|ref|ZP_06382858.1| 50S ribosomal protein L3 [Arthrospira platensis str. Paraca]
Length = 229
Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats.
Identities = 81/226 (35%), Positives = 122/226 (53%), Gaps = 20/226 (8%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
M G++ KLGMT V++ G+ IPVTV+ C + +T +GY A+Q+G GE K
Sbjct: 1 MSVGILGTKLGMTQVFDTETGKAIPVTVVQAGPCTITQVKTEATDGYTAIQLGYGEVPNK 60
Query: 60 ----------------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYF 103
+S +G + N + L E+R++ D+ +G F
Sbjct: 61 TRKLNTRKSPDKEVNKYLSHAEQGHLTKSNSPLVRHLKEYRLESTDN-FELGQQVKVDAF 119
Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163
GQ+VDVTG+++G+GF+G KR+NF HG S +HR GS G PGRV+ KKM
Sbjct: 120 EPGQIVDVTGISMGRGFAGNQKRNNFRRGPMAHG-SKNHRLPGSIGPGTTPGRVYPGKKM 178
Query: 164 AGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
AGR GG ++T + L +V VD +R L+L+KG +PG K + ++ +
Sbjct: 179 AGRYGGKQITTRKLTIVRVDLERNLLLIKGSIPG-KTGGLLNIKPA 223
>gi|269468075|gb|EEZ79789.1| ribosomal protein L3 [uncultured SUP05 cluster bacterium]
Length = 278
Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats.
Identities = 97/223 (43%), Positives = 134/223 (60%), Gaps = 9/223 (4%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG-------A 53
M G+V +KLGMT + + +G V+V+ ++ +VV RT + +GY AVQV
Sbjct: 1 MAIGLVGQKLGMTRIMSEDGSATAVSVIKIEANRVVQTRTTEVDGYSAVQVTTGAKVNKK 60
Query: 54 GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTG 113
GEAKV+ V ++G ++ + L+EFR D + + S F S F G VDVTG
Sbjct: 61 GEAKVRRVPSAIKGHYAKASQDIGLGLWEFR--ADANEIGDASSFDLSIFGAGHYVDVTG 118
Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
+ GKGF G +KRHNF ATHG SISHR+ GSTG Q+PGRVFK KKMAG MG +VT
Sbjct: 119 QSKGKGFQGGVKRHNFQMQDATHGNSISHRAIGSTGQCQEPGRVFKGKKMAGHMGDEQVT 178
Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
+ LE++ VD +R L+LVKG +PG+K ++ + K +N
Sbjct: 179 EECLEIIRVDSERNLLLVKGAIPGSKSGFVKVMLSAKKDKINS 221
>gi|258591316|emb|CBE67615.1| 50S ribosomal subunit protein L3 [NC10 bacterium 'Dutch sediment']
Length = 210
Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats.
Identities = 86/210 (40%), Positives = 123/210 (58%), Gaps = 4/210 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG-EAKVK 59
M G++ +K+GMT ++ G +PVT++ C +V RT +GY AVQ+G E K +
Sbjct: 1 MGIGLLGKKVGMTQLFGESGNAVPVTIIEAGPCPIVQLRTSSTDGYEAVQIGYRAERKTR 60
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRV-QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
++KP++G F V+P+K L EFR+ +D VG + + F G+ V VTG+T GK
Sbjct: 61 RIAKPLKGHFDKAKVTPQKYLREFRLKTQDSSKYTVGEILTVGLFEAGEKVQVTGITKGK 120
Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
GF G +KR + G THG S+ HR+ GS G P RVFK M GRMG +R TVK L+
Sbjct: 121 GFQGGVKRWGYLGGPETHG-SMFHRAPGSIGASSFPSRVFKGHHMPGRMGTDRATVKGLQ 179
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRD 208
VV + ++ L+LVKG VPG S + +
Sbjct: 180 VVKILPEQNLVLVKGAVPGPA-GSVVTISK 208
>gi|302307337|ref|NP_983967.2| ADL129Wp [Ashbya gossypii ATCC 10895]
gi|299788953|gb|AAS51791.2| ADL129Wp [Ashbya gossypii ATCC 10895]
Length = 267
Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats.
Identities = 97/217 (44%), Positives = 144/217 (66%), Gaps = 2/217 (0%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
+R GV+ RK+GM ++ G R+ TVL ++N +VV+ +T+ NGY A QVG G
Sbjct: 50 LRCGVLTRKVGMMPYFDVATGARMAATVLEMNNVEVVLQKTVAANGYWACQVGYGNKHPS 109
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V++ + G F+S V+PK+K+ EFRV+ ++ LLPVG++ PS+F+ GQ VD+ ++ GKG
Sbjct: 110 KVTRQLLGHFASKEVNPKEKVTEFRVKNEEGLLPVGTLLKPSFFSPGQYVDLRSVSKGKG 169
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G MKR+NF G +A+HG S+SHR GS G Q PGR+ KKM G MG RVT++N++V
Sbjct: 170 FQGVMKRYNFKGQKASHGNSLSHRKGGSYGQNQTPGRILPGKKMPGHMGVQRVTIQNVQV 229
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
+ V D +G+I+VKG V G K +++ V+D+ K
Sbjct: 230 LEVQDSKGVIIVKGSVAGP-KGAFVKVQDAIKKPPTA 265
>gi|163783906|ref|ZP_02178880.1| ribosomal protein L03 [Hydrogenivirga sp. 128-5-R1-1]
gi|159880827|gb|EDP74357.1| ribosomal protein L03 [Hydrogenivirga sp. 128-5-R1-1]
Length = 230
Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats.
Identities = 92/219 (42%), Positives = 131/219 (59%), Gaps = 4/219 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M +G++ +K+GMT ++ G+ IPVTV+ ++ +V RT +K+GY AV +G GE K K
Sbjct: 1 MPTGIIGKKIGMTRIF-KNGKAIPVTVIQVEPNYIVGIRTKEKDGYSAVILGTGEKKEKR 59
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
KP+ F + P + L EF +++ + V F G LVDV G + G+GF
Sbjct: 60 TPKPLLKIFEKAGLKPLRVLKEFPLKEGEQPEVGKEVKVEEVFQPGDLVDVAGKSKGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+ AMKR +FGG R +HG S HR+ GS G +P RVFK K+MAG G RV+V LEVV
Sbjct: 120 TSAMKRWDFGGFRKSHG-SRYHRAVGSVGAATEPSRVFKGKRMAGHYGNERVSVLGLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
+ ++ +ILVKG VPGA K S++ ++ S A KGK
Sbjct: 179 DIIPEKSVILVKGSVPGATK-SYVELKASV-IANRRKGK 215
>gi|228925363|ref|ZP_04088459.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228931612|ref|ZP_04094518.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228943916|ref|ZP_04106301.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228950658|ref|ZP_04112792.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228956551|ref|ZP_04118347.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|229041015|ref|ZP_04189778.1| 50S ribosomal protein L3 [Bacillus cereus AH676]
gi|229067875|ref|ZP_04201192.1| 50S ribosomal protein L3 [Bacillus cereus F65185]
gi|229077410|ref|ZP_04210063.1| 50S ribosomal protein L3 [Bacillus cereus Rock4-2]
gi|229107796|ref|ZP_04237432.1| 50S ribosomal protein L3 [Bacillus cereus Rock1-15]
gi|229119772|ref|ZP_04249033.1| 50S ribosomal protein L3 [Bacillus cereus 95/8201]
gi|229125627|ref|ZP_04254659.1| 50S ribosomal protein L3 [Bacillus cereus BDRD-Cer4]
gi|229136956|ref|ZP_04265583.1| 50S ribosomal protein L3 [Bacillus cereus BDRD-ST26]
gi|229142916|ref|ZP_04271357.1| 50S ribosomal protein L3 [Bacillus cereus BDRD-ST24]
gi|229148519|ref|ZP_04276775.1| 50S ribosomal protein L3 [Bacillus cereus m1550]
gi|229159283|ref|ZP_04287307.1| 50S ribosomal protein L3 [Bacillus cereus R309803]
gi|229176710|ref|ZP_04304114.1| 50S ribosomal protein L3 [Bacillus cereus 172560W]
gi|228606753|gb|EEK64170.1| 50S ribosomal protein L3 [Bacillus cereus 172560W]
gi|228624175|gb|EEK80977.1| 50S ribosomal protein L3 [Bacillus cereus R309803]
gi|228634935|gb|EEK91508.1| 50S ribosomal protein L3 [Bacillus cereus m1550]
gi|228640537|gb|EEK96926.1| 50S ribosomal protein L3 [Bacillus cereus BDRD-ST24]
gi|228646494|gb|EEL02701.1| 50S ribosomal protein L3 [Bacillus cereus BDRD-ST26]
gi|228657819|gb|EEL13625.1| 50S ribosomal protein L3 [Bacillus cereus BDRD-Cer4]
gi|228663673|gb|EEL19252.1| 50S ribosomal protein L3 [Bacillus cereus 95/8201]
gi|228675645|gb|EEL30853.1| 50S ribosomal protein L3 [Bacillus cereus Rock1-15]
gi|228705901|gb|EEL58234.1| 50S ribosomal protein L3 [Bacillus cereus Rock4-2]
gi|228715234|gb|EEL67093.1| 50S ribosomal protein L3 [Bacillus cereus F65185]
gi|228727312|gb|EEL78506.1| 50S ribosomal protein L3 [Bacillus cereus AH676]
gi|228803116|gb|EEM49938.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228809009|gb|EEM55494.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228815749|gb|EEM61985.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228828040|gb|EEM73768.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228834285|gb|EEM79826.1| 50S ribosomal protein L3 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 199
Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats.
Identities = 88/203 (43%), Positives = 125/203 (61%), Gaps = 4/203 (1%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
MT V+ G IPVTV+ + V+ +T + +GY A+Q+G + + K +KP +G +
Sbjct: 1 MTQVFAENGELIPVTVIAANPNVVLQKKTTETDGYNAIQLGFEDKREKLTNKPEQGHTAK 60
Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
+ +PK+ + E R D D L VG F G++VDVTG++ GKGF G +KRH
Sbjct: 61 ASTTPKRFIREIR-DADVDGLEVGQEVKVDVFATGEIVDVTGISKGKGFQGVIKRHGQSR 119
Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
+HG S HR GS G P RVFK KK+AGRMGG++VT++NLE+V VD +R L+LV
Sbjct: 120 GPMSHG-SRYHRRPGSMGPVA-PNRVFKGKKLAGRMGGDQVTIQNLEIVQVDTERNLLLV 177
Query: 192 KGCVPGAKKNSWILVRDSFKSAV 214
KG VPGAKK S ++V+ + K +
Sbjct: 178 KGNVPGAKK-SLVVVQGAVKVSK 199
>gi|325856043|ref|ZP_08171932.1| 50S ribosomal protein L3 [Prevotella denticola CRIS 18C-A]
gi|327313190|ref|YP_004328627.1| 50S ribosomal protein L3 [Prevotella denticola F0289]
gi|325483715|gb|EGC86679.1| 50S ribosomal protein L3 [Prevotella denticola CRIS 18C-A]
gi|326944923|gb|AEA20808.1| 50S ribosomal protein L3 [Prevotella denticola F0289]
Length = 204
Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats.
Identities = 85/206 (41%), Positives = 121/206 (58%), Gaps = 5/206 (2%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G GEAK K SK
Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKTVEKDGYKAVQLGFGEAKEKRTSK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P G F +PKK L EF K D+ +G + F + VDV G + GKGF G
Sbjct: 63 PQLGHFKKAGTTPKKHLAEF---KFDEEYNLGDTITVELFNDTKFVDVVGTSKGKGFQGV 119
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G ++THG R GS G P +VFK +M G+MGG+RVT +NL+V+ V
Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLQVLKV 179
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRD 208
+ L+LVKG V G S +++
Sbjct: 180 IPEHNLLLVKGSVAGC-NGSTVIISK 204
>gi|269115073|ref|YP_003302836.1| 50S ribosomal protein L3 [Mycoplasma hominis]
gi|268322698|emb|CAX37433.1| 50S ribosomal protein L3 [Mycoplasma hominis ATCC 23114]
Length = 268
Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats.
Identities = 79/216 (36%), Positives = 121/216 (56%), Gaps = 6/216 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT ++ EG+ IPVTV+ + V T +KNGY+A+Q+ + K +
Sbjct: 1 MKGILGRKVGMTQLFTSEGKLIPVTVVEVKPNVVTKVLTSEKNGYVALQLATEDKKSSRI 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
KP +F N +PK+ + E R D +G S FT G++VDVT ++ GKGF+
Sbjct: 61 IKPEVNYFKQANTTPKRFVKEIR---DMSGFSLGDTVDASLFTAGEVVDVTAISKGKGFA 117
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP--GRVFKNKKMAGRMGGNRVTVKNLEV 179
G +KR N +HG + TG D RV+K M G +G +VTV+NLEV
Sbjct: 118 GTIKRWNQHIGPKSHGGGGGSQPVRQTGSLGDISGNRVWKGMTMPGHLGAEQVTVQNLEV 177
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
V D + ++L+KG VPGA K ++++++ + KS N
Sbjct: 178 VKEDAENNILLIKGSVPGA-KGAFLIIKTAKKSIKN 212
>gi|145219061|ref|YP_001129770.1| 50S ribosomal protein L3 [Prosthecochloris vibrioformis DSM 265]
gi|189042857|sp|A4SCQ9|RL3_PROVI RecName: Full=50S ribosomal protein L3
gi|145205225|gb|ABP36268.1| LSU ribosomal protein L3P [Chlorobium phaeovibrioides DSM 265]
Length = 209
Score = 191 bits (486), Expect = 6e-47, Method: Composition-based stats.
Identities = 85/207 (41%), Positives = 121/207 (58%), Gaps = 1/207 (0%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ +K+GMT +YN + +P T++ C V ++ +GY A QVG GE K V+KP
Sbjct: 4 ILGKKIGMTRLYNEKREAVPCTIIQAGPCFVTQVKSAGIDGYDAYQVGIGERKEAKVTKP 63
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
M G + V+P EF D L GS FT G++V V G++ GKGF+G +
Sbjct: 64 MLGHYKKAGVAPGYMTAEFDTSMFDGELTAGSPVLVESFTEGEIVKVQGVSKGKGFAGVV 123
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KRHNFGG + THG S R+ GS G DP + FK KM GRMG + +TV+NL+V+ +
Sbjct: 124 KRHNFGGGQRTHGQSDRLRAPGSIGGASDPSKTFKGTKMGGRMGSDTITVRNLQVIKIMP 183
Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211
+ LI+VKG VPG KNS++ + + K
Sbjct: 184 ESSLIMVKGSVPGP-KNSYVRIVSTKK 209
>gi|149198922|ref|ZP_01875963.1| 50S ribosomal protein L3 [Lentisphaera araneosa HTCC2155]
gi|149137917|gb|EDM26329.1| 50S ribosomal protein L3 [Lentisphaera araneosa HTCC2155]
Length = 210
Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats.
Identities = 83/201 (41%), Positives = 114/201 (56%), Gaps = 2/201 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
+G++ +KLGMT VY+ +GR +PVTV+ C V+ +T DK+ Y A+Q+G G + KNV
Sbjct: 1 MTGIIGKKLGMTQVYDDKGRLVPVTVIEAGPCPVLDVKTNDKDSYSALQIGFGSKRAKNV 60
Query: 62 SKPMRGFFSSV-NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SK + G + N L + + D VGSV + F+ VDV G T G+GF
Sbjct: 61 SKAVLGHLAKSNNQENPPALIKEIRLEADSDKEVGSVLTVEEFSDIAYVDVIGTTKGRGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR NFGG RA+HG R GS G PGRVFK KKM G MG + T + L+V+
Sbjct: 121 QGVVKRWNFGGGRASHGGDW-ERKGGSIGMCNWPGRVFKGKKMPGHMGSVQRTSQGLKVI 179
Query: 181 SVDDKRGLILVKGCVPGAKKN 201
V + +++VKG VPG
Sbjct: 180 QVRPEENILMVKGAVPGFNGG 200
>gi|260592765|ref|ZP_05858223.1| 50S ribosomal protein L3 [Prevotella veroralis F0319]
gi|260535296|gb|EEX17913.1| 50S ribosomal protein L3 [Prevotella veroralis F0319]
Length = 204
Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats.
Identities = 86/206 (41%), Positives = 122/206 (59%), Gaps = 5/206 (2%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G GEAK K SK
Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYKAVQLGFGEAKEKRTSK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P +G F SPKK L E K D+ +G + F + VDV G + GKGF G
Sbjct: 63 PQQGHFKKAGTSPKKHLAE---FKFDEEYNLGDTITVELFNDVKFVDVVGTSKGKGFQGV 119
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G ++THG R GS G P +VFK +M G+MGG+RVT +NL+V+ V
Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLQVLKV 179
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRD 208
+ LILVKG V G S ++++
Sbjct: 180 IPEHNLILVKGSVAGC-NGSTVIIKK 204
>gi|124514443|gb|EAY55956.1| ribosomal protein L3 [Leptospirillum rubarum]
Length = 207
Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats.
Identities = 80/206 (38%), Positives = 127/206 (61%), Gaps = 5/206 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M++ ++ RKLGMT +Y G+ +PVT++ C+V+ +T +K GY A Q+G K+
Sbjct: 1 MKT-LLGRKLGMTQIYLPSGQAVPVTIVEAGPCEVLQVKTSEKEGYSAAQIGYFPVSPKH 59
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP RG + + + EF+V +++ G++ + F G +D+TG + GKGF
Sbjct: 60 LNKPERGHQQKYAKNLYRYVREFKV--EENTQAPGNILTVEIFQEGDSLDITGQSKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKRH+F G ATHG S+ HR GS G P RV KNKK+ G MG R+TVKNL+++
Sbjct: 118 AGVMKRHHFRGGDATHG-SMFHREPGSIGSSAYPSRVLKNKKLPGHMGDKRITVKNLKLI 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
+V + L+ +KG +PG+ S+++V
Sbjct: 177 AVKPEANLLFIKGAIPGS-NGSFVVV 201
>gi|42559578|sp|P60457|RL3_SPIKU RecName: Full=50S ribosomal protein L3
gi|34849393|gb|AAP58892.1| ribosomal protein L3 [Spiroplasma kunkelii CR2-3x]
Length = 258
Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats.
Identities = 81/214 (37%), Positives = 132/214 (61%), Gaps = 6/214 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT ++ +GR IPVTV+ +++ V+ T ++NGY A+Q+ + ++ V
Sbjct: 1 MKGILGRKIGMTQIFATDGRLIPVTVVEVEHNIVLRVLTKEQNGYQALQLAVEDKRISLV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SKP +G F N +PK+ + E R + D G + FT G+ VDVTG + GKGF+
Sbjct: 61 SKPDQGQFKKANTTPKRFVKEIR---NMDGYNSGDIIKADIFTAGEFVDVTGTSKGKGFT 117
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G++KRHN+ HG S HR GS G P R+ K+KKM G +G +VT++NLE+++
Sbjct: 118 GSIKRHNYSRGPMGHG-SGYHRGVGSMGAIA-PNRILKSKKMPGHIGTEKVTIQNLEIIA 175
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
+D ++ +LVKG +PG KK +++++++ K
Sbjct: 176 IDTEKNALLVKGSIPGPKK-QFVVIKEAIKGLKP 208
>gi|121534759|ref|ZP_01666580.1| ribosomal protein L3 [Thermosinus carboxydivorans Nor1]
gi|121306779|gb|EAX47700.1| ribosomal protein L3 [Thermosinus carboxydivorans Nor1]
Length = 217
Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats.
Identities = 95/216 (43%), Positives = 131/216 (60%), Gaps = 5/216 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
++ +KLGMT ++ EG +PVTV+ +V +T++ +GY AVQ+G G K K V
Sbjct: 5 TKAILGKKLGMTQIFTAEGHLVPVTVVEAAPNVLVQRKTVETDGYNAVQLGFGAVKDKKV 64
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KPM+G F+ V P + + E R+ + VG F+ G+LVDVTG GKGF+
Sbjct: 65 TKPMKGHFAKAGVKPVRFIRELRL-PSEPEFQVGQTIGVDIFSDGELVDVTGTGKGKGFA 123
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQD--PGRVFKNKKMAGRMGGNRVTVKNLEV 179
G +KRHNF HG S SHR GS G R G+VFK KK+ GRMGG+RVTV+ L V
Sbjct: 124 GGIKRHNFKRGPMAHG-SKSHREPGSMGPRMSGGGGKVFKGKKLPGRMGGHRVTVQRLTV 182
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
V VD R L+L+KG +PGA K S ++V+++ K A
Sbjct: 183 VRVDKDRNLLLIKGAIPGA-KGSLVMVKNTVKPAKK 217
>gi|309777133|ref|ZP_07672096.1| 50S ribosomal protein L3 [Erysipelotrichaceae bacterium 3_1_53]
gi|308915003|gb|EFP60780.1| 50S ribosomal protein L3 [Erysipelotrichaceae bacterium 3_1_53]
Length = 228
Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats.
Identities = 77/219 (35%), Positives = 114/219 (52%), Gaps = 6/219 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RKLGMT V+ +G IPVTV+ V+ +T++ +GY AVQ+G + K
Sbjct: 1 MKGILGRKLGMTQVFTEDGTLIPVTVVEACPNVVLQKKTVENDGYEAVQLGFEDVKETRS 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+K G + N +PK+ + E R + DL + F+ G+ VDV G + GKGF+
Sbjct: 61 TKGEAGHAAKANTAPKRFVKEVRDSEFADLELGAE-INVGIFSAGETVDVIGTSKGKGFN 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGR---VFKNKKMAGRMGGNRVTVKNLE 178
G + R+N +HG S HR GS R + K MAG+ GG R T +NL
Sbjct: 120 GTIVRNNAKIGPKSHG-SGHHRHIGSLATNGITSRQGKIIKGTIMAGQEGGYRTTNQNLT 178
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
V+ VD + +L+KG VPG K ++VR + S N +
Sbjct: 179 VIKVDVENNYLLIKGNVPGP-KRGMVMVRTAKCSKGNTE 216
>gi|118411058|ref|YP_874453.1| 50S ribosomal protein L3 [Phaeodactylum tricornutum]
gi|125987627|sp|A0T0H8|RK3_PHATC RecName: Full=50S ribosomal protein L3, chloroplastic
gi|116739805|gb|ABK20676.1| 50S ribosomal protein L3 [Phaeodactylum tricornutum]
Length = 207
Score = 191 bits (485), Expect = 7e-47, Method: Composition-based stats.
Identities = 78/209 (37%), Positives = 121/209 (57%), Gaps = 2/209 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ K+GMT +++ G IPVT+L + C + + K+GY ++Q+G G K
Sbjct: 1 MVVGLLGNKIGMTQIFDESGNIIPVTILKVGPCVITQVKNQSKDGYDSIQIGYGNVLSKA 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+++P G N+ P K L EFR+ + +G V + FT GQLV++ G +IGKGF
Sbjct: 61 LTQPELGHLQKSNIQPLKYLKEFRI-NQETEFQIGQVLNVDSFTPGQLVNIQGKSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
SG KRHNF THG S +HR+ GS G PGRV KKM+G++G T+K L+++
Sbjct: 120 SGLQKRHNFTRGPMTHG-SKNHRAPGSIGMGTTPGRVLPGKKMSGQLGNKITTIKKLKII 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
++ + ++++KG VPG N +V +
Sbjct: 179 QINSEENILVIKGSVPGKPGNLLSIVPSA 207
>gi|330470173|ref|YP_004407916.1| 50S ribosomal protein L3 [Verrucosispora maris AB-18-032]
gi|328813144|gb|AEB47316.1| 50S ribosomal protein L3 [Verrucosispora maris AB-18-032]
Length = 207
Score = 191 bits (485), Expect = 7e-47, Method: Composition-based stats.
Identities = 89/209 (42%), Positives = 123/209 (58%), Gaps = 3/209 (1%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
MT V++ + +PVTV+ C + R DK+GY AVQ+ G + KP+RG ++
Sbjct: 1 MTQVWD-NNKVVPVTVVQAGPCVISQVRDADKDGYSAVQLAYGTIDPRKAKKPLRGHYAK 59
Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
+V+P++ + E R D +G + F G +DVTG T GKG++G MKRH F G
Sbjct: 60 ADVAPRRHIVELRTS-DAADYSLGQEITVEEFPAGISIDVTGKTKGKGYAGPMKRHGFHG 118
Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
LRA+HGV HRS GS G PGRVFK +MAGRMGG R TV+NL V +VD + L+LV
Sbjct: 119 LRASHGVERKHRSPGSIGACATPGRVFKGTRMAGRMGGVRYTVQNLTVQAVDTENNLLLV 178
Query: 192 KGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
+G +PG K + +LVR + K+ G
Sbjct: 179 RGAIPGP-KGALVLVRTAAKTKAKKGGAA 206
>gi|269925831|ref|YP_003322454.1| ribosomal protein L3 [Thermobaculum terrenum ATCC BAA-798]
gi|269789491|gb|ACZ41632.1| ribosomal protein L3 [Thermobaculum terrenum ATCC BAA-798]
Length = 204
Score = 191 bits (485), Expect = 7e-47, Method: Composition-based stats.
Identities = 89/210 (42%), Positives = 121/210 (57%), Gaps = 6/210 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT +++ GR +PVTV+ V +T +++GY AVQ+G E K
Sbjct: 1 MVEGLIGKKIGMTHIFDENGRFVPVTVIQAGPNFVTFIKTKERDGYEAVQLGFEEVKK-- 58
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+ KP RG ++ P + + L VG S F G+ VDVTG + GKGF
Sbjct: 59 LKKPERGHLKNL---PPLRHLREFKADNISELQVGQKVDASIFQAGEKVDVTGTSKGKGF 115
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KRH FGG THG S HR+ GS G PG+V K ++MAGR GG RVTVK L VV
Sbjct: 116 TGVVKRHGFGGGPKTHGQSDRHRAPGSIGATTTPGKVLKGQRMAGRAGGERVTVKRLTVV 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
+VD R L+LVKG VPGA + +R +
Sbjct: 176 AVDTDRNLLLVKGAVPGA-NGGLLQIRKAK 204
>gi|254527207|ref|ZP_05139259.1| ribosomal protein L3 [Prochlorococcus marinus str. MIT 9202]
gi|221538631|gb|EEE41084.1| ribosomal protein L3 [Prochlorococcus marinus str. MIT 9202]
Length = 217
Score = 190 bits (484), Expect = 8e-47, Method: Composition-based stats.
Identities = 80/208 (38%), Positives = 128/208 (61%), Gaps = 3/208 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGM+ +++ +G +PVT++ C+V +T +GY A+Q+G G +K K+
Sbjct: 1 MSIGILGKKLGMSQLFDDKGNAVPVTLIEAGPCRVTQLKTNALDGYTAIQIGYGVSKEKH 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+SKP +G K L E+RV++ +G+ + F VGQ VD++G ++G+GF
Sbjct: 61 ISKPEKGHLLKSGEELLKHLKEYRVEETSS-YEIGNQITVKNFEVGQKVDISGKSMGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
SG KRH F +HG S +HR+ GSTG PGR++ K+MAGR GG ++T K L V+
Sbjct: 120 SGYQKRHGFSRGPMSHG-SKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKQITTKGLLVL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
+DD++ L++VKG VPG S + ++
Sbjct: 179 KIDDQKNLLVVKGSVPGKP-GSIVNIKP 205
>gi|15644248|ref|NP_229300.1| 50S ribosomal protein L3 [Thermotoga maritima MSB8]
gi|148270422|ref|YP_001244882.1| 50S ribosomal protein L3 [Thermotoga petrophila RKU-1]
gi|170289183|ref|YP_001739421.1| ribosomal protein L3 [Thermotoga sp. RQ2]
gi|281412729|ref|YP_003346808.1| 50S ribosomal protein L3 [Thermotoga naphthophila RKU-10]
gi|585886|sp|P38515|RL3_THEMA RecName: Full=50S ribosomal protein L3
gi|166234605|sp|A5IM83|RL3_THEP1 RecName: Full=50S ribosomal protein L3
gi|226730584|sp|B1LBP0|RL3_THESQ RecName: Full=50S ribosomal protein L3
gi|4982064|gb|AAD36566.1|AE001798_31 ribosomal protein L3 [Thermotoga maritima MSB8]
gi|437923|emb|CAA79777.1| ribosomal protein L3 [Thermotoga maritima]
gi|147735966|gb|ABQ47306.1| LSU ribosomal protein L3P [Thermotoga petrophila RKU-1]
gi|170176686|gb|ACB09738.1| ribosomal protein L3 [Thermotoga sp. RQ2]
gi|281373832|gb|ADA67394.1| 50S ribosomal protein L3 [Thermotoga naphthophila RKU-10]
Length = 207
Score = 190 bits (484), Expect = 8e-47, Method: Composition-based stats.
Identities = 92/210 (43%), Positives = 126/210 (60%), Gaps = 6/210 (2%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ RK+GMT V+ +PVTV+ C VV +T++K+GY AVQ+G +AK V+KP
Sbjct: 4 IIGRKIGMTRVFVGN-DSVPVTVIKAGPCVVVQKKTVEKDGYNAVQLGFEKAKK--VNKP 60
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+ G F V P K L EFRV+ D+ G V F G+ VDVTG T G+GF+GAM
Sbjct: 61 LAGHFKKFGVEPMKILREFRVENPDE-YEPGQVIKVDVFEKGEYVDVTGWTKGRGFAGAM 119
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR F G +HG S HR GS G +P +++K KKM GR G RVTV+NL+VV +D
Sbjct: 120 KRWGFSGGPKSHG-SKFHRELGSVGQHTEPAKIWKGKKMPGRYGNERVTVRNLQVVDIDP 178
Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
+ L++VKG VPGA + +L+R +
Sbjct: 179 ENDLLVVKGGVPGA-RGGLVLIRSAKAPKK 207
>gi|206602675|gb|EDZ39156.1| Ribosomal protein L3 [Leptospirillum sp. Group II '5-way CG']
Length = 207
Score = 190 bits (484), Expect = 8e-47, Method: Composition-based stats.
Identities = 80/206 (38%), Positives = 127/206 (61%), Gaps = 5/206 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M++ ++ RKLGMT +Y G+ +PVT++ C+++ +T +K GY A Q+G K+
Sbjct: 1 MKT-LLGRKLGMTQIYLPSGQAVPVTIVEAGPCEILQVKTSEKEGYSAAQIGYFPISPKH 59
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP RG + + + EF+V +++ GS+ + F G +D+TG + GKGF
Sbjct: 60 LNKPERGHQQKYAKNLYRYVREFKV--EENTQSPGSILTVEIFQEGDSLDITGQSKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKRH+F G ATHG S+ HR GS G P RV KNKK+ G MG R+TVKNL+++
Sbjct: 118 AGVMKRHHFRGGDATHG-SMFHREPGSIGSSAYPSRVLKNKKLPGHMGDKRITVKNLKLI 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
+V + L+ +KG +PG+ S+++V
Sbjct: 177 AVKPEANLLFIKGAIPGS-NGSFVVV 201
>gi|238898927|ref|YP_002924609.1| 50S ribosomal subunit protein L3 [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
gi|259646549|sp|C4K7B8|RL3_HAMD5 RecName: Full=50S ribosomal protein L3
gi|229466687|gb|ACQ68461.1| 50S ribosomal subunit protein L3 [Candidatus Hamiltonella defensa
5AT (Acyrthosiphon pisum)]
Length = 210
Score = 190 bits (484), Expect = 8e-47, Method: Composition-based stats.
Identities = 96/211 (45%), Positives = 135/211 (63%), Gaps = 1/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +KLGMT ++ +G IPVTV+ + +V + LD +GY+A+Q+ G K V
Sbjct: 1 MKGLVGKKLGMTRIFTKDGISIPVTVIEIKANRVTQIKNLDSDGYLALQITTGTKKASRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ NV + L+EFRV + D + +G F S F G +VDVTG + GKGFS
Sbjct: 61 NKPKAGHFAKANVEAGRGLWEFRVSEQDATVFLGHTFEVSMFKPGDIVDVTGKSKGKGFS 120
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR NF A+HG S+SHR GS G Q PG+VFK KKM+G++G RVT++NLEVV
Sbjct: 121 GTVKRWNFRTQDASHGNSLSHRVPGSIGQNQTPGKVFKGKKMSGQLGNERVTIQNLEVVR 180
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD R ++L+KG VPGA ++V+ + K+
Sbjct: 181 VDVVREILLIKGGVPGAV-GKDVIVKLAVKA 210
>gi|282891949|ref|ZP_06300428.1| hypothetical protein pah_c200o113 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498209|gb|EFB40549.1| hypothetical protein pah_c200o113 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 220
Score = 190 bits (484), Expect = 9e-47, Method: Composition-based stats.
Identities = 83/219 (37%), Positives = 122/219 (55%), Gaps = 10/219 (4%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK- 59
M ++ +K GMT ++ G I TV+ ++ V +T +K+GY AVQ+G + +
Sbjct: 1 MAIKLMGKKRGMTQRFDEAGNLIVCTVIEVEPNVVTQLKTKEKDGYNAVQLGFEKIEAND 60
Query: 60 ------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTG 113
SKP++G ++ V P++ EFR+ +D +G F +DV G
Sbjct: 61 PRTVKRRTSKPLQGHYAKAGVEPRRFSGEFRI-EDSAEFSLGQELKVDLFKEAGYLDVIG 119
Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
++ GKG+ G MK HNFGG A HG S HR GSTG R PGR K A MG +RVT
Sbjct: 120 VSKGKGYQGVMKLHNFGGGPAAHG-SGFHRHAGSTGMRSTPGRCLPGGKRASHMGVDRVT 178
Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V+NL++V VD++ LILV+G VPGA +S + +R++ K
Sbjct: 179 VENLKIVLVDEENNLILVQGQVPGAY-DSLLFLREARKK 216
>gi|317153958|ref|YP_004122006.1| 50S ribosomal protein L3 [Desulfovibrio aespoeensis Aspo-2]
gi|316944209|gb|ADU63260.1| 50S ribosomal protein L3 [Desulfovibrio aespoeensis Aspo-2]
Length = 210
Score = 190 bits (484), Expect = 9e-47, Method: Composition-based stats.
Identities = 83/207 (40%), Positives = 121/207 (58%), Gaps = 2/207 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +KLGMT ++ +G VTV+ C V+ +T DK GY A+Q+G + V
Sbjct: 4 MLGILGKKLGMTRIFKEDGSVCCVTVIEAGPCPVMQIKTQDKEGYNALQLGYDTIAERKV 63
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP++G + + L EF ++ D +G + F+ G+ V VTG + GKGF
Sbjct: 64 NKPLKGHMAKAGKDMYRHLREFPLEGVDG-YELGQEITVDIFSAGEKVKVTGTSKGKGFQ 122
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRHNF G RA+HG HR GS G PGRV+KNKKM G+MG RVT+ N+E+V
Sbjct: 123 GVMKRHNFSGSRASHGAEKVHRVPGSVGNATYPGRVWKNKKMPGQMGNARVTLSNVEIVD 182
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRD 208
V + +++VKG VPG N ++++R
Sbjct: 183 VRPEDNVLVVKGQVPGP-NNGFVMIRK 208
>gi|113476579|ref|YP_722640.1| 50S ribosomal protein L3 [Trichodesmium erythraeum IMS101]
gi|123056500|sp|Q110A7|RL3_TRIEI RecName: Full=50S ribosomal protein L3
gi|110167627|gb|ABG52167.1| LSU ribosomal protein L3P [Trichodesmium erythraeum IMS101]
Length = 227
Score = 190 bits (484), Expect = 9e-47, Method: Composition-based stats.
Identities = 87/224 (38%), Positives = 119/224 (53%), Gaps = 18/224 (8%)
Query: 1 MRSGVVARKLGMTCVY-NIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV- 58
M G++ KLGMT V+ G+ IPVTV+ C V +T +GY AVQ+G GEAK
Sbjct: 1 MVVGILGTKLGMTQVFEAETGKAIPVTVVEAGPCVVTQIKTEQTDGYTAVQIGYGEAKNK 60
Query: 59 -------------KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTV 105
+ ++ G +P + L E+RV + +G F
Sbjct: 61 TRQLNTKEPKEVNRYLTNAQEGHLVKSGGTPLRYLREYRVDNTGN-FELGQQIKVDLFEA 119
Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165
GQLVDVTG +IGKGF+G KRHNF HG S +HR GSTG PGRV+ KKMAG
Sbjct: 120 GQLVDVTGKSIGKGFAGYQKRHNFRRGPMAHG-SKNHRLPGSTGPGTTPGRVYPGKKMAG 178
Query: 166 RMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
+G RVT + L++V +D +R L+L+KG +PG + I + +
Sbjct: 179 HLGNVRVTTRKLKIVRIDPERNLLLIKGSIPGKS-GTLISIAPA 221
>gi|257064320|ref|YP_003143992.1| LSU ribosomal protein L3P [Slackia heliotrinireducens DSM 20476]
gi|256791973|gb|ACV22643.1| LSU ribosomal protein L3P [Slackia heliotrinireducens DSM 20476]
Length = 206
Score = 190 bits (484), Expect = 9e-47, Method: Composition-based stats.
Identities = 88/209 (42%), Positives = 121/209 (57%), Gaps = 3/209 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M + + +K+GMT ++N + + +P TV+ + +V +T D +GY AVQ+G G K +
Sbjct: 1 MINAIYGKKIGMTQLFNEDEKVVPCTVIVAEPNKVCQIKTTDTDGYEAVQLGFGAIKPQK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KPM G F+ + P + L E RV+ D VG + + F + V VTG +IGKGF
Sbjct: 61 VNKPMAGHFAKLGTEPTRYLREVRVENAAD-YKVGDLQTVEAFADVKKVHVTGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH F G HG HR+ GS G P RV K +M G MG N VT KNLEVV
Sbjct: 120 QGVIKRHGFRGGPGGHGAH-FHRAPGSVGMCATPSRVLKGVRMPGHMGCNTVTTKNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
+D ++ LILVKG VPGA K + VR +
Sbjct: 179 RIDAEQNLILVKGAVPGA-KGGIVRVRMA 206
>gi|320526869|ref|ZP_08028059.1| 50S ribosomal protein L3 [Solobacterium moorei F0204]
gi|320132837|gb|EFW25377.1| 50S ribosomal protein L3 [Solobacterium moorei F0204]
Length = 253
Score = 190 bits (484), Expect = 9e-47, Method: Composition-based stats.
Identities = 80/214 (37%), Positives = 113/214 (52%), Gaps = 4/214 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RKLGMT V+ IEG IPVTV+ + V+ +T + +GY AVQ+G + K +
Sbjct: 1 MKGILGRKLGMTQVFTIEGTLIPVTVIDVKPNVVLQKKTKEVDGYEAVQLGYEDVKEQRS 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G N +PK + E R + L VG+ F G +VDV G + GKG+S
Sbjct: 61 NKPAIGHAKKANTAPKHYIKELRADEM-MNLEVGAEVKADLFKAGDVVDVQGTSKGKGYS 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQ-DPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G + R+N THG S HR GS + G V K M G+ G T +NL +V
Sbjct: 120 GTIVRNNAARGPMTHG-SGHHRHIGSLATNGRNNGVVNKGTVMPGQEGVYTTTNQNLTIV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VD + G ILVKG VPG +K ++++ + K
Sbjct: 179 KVDAEEGYILVKGNVPGPRKG-LVVIKTTVKPVK 211
>gi|302415769|ref|XP_003005716.1| 54S ribosomal protein L9 [Verticillium albo-atrum VaMs.102]
gi|261355132|gb|EEY17560.1| 54S ribosomal protein L9 [Verticillium albo-atrum VaMs.102]
Length = 337
Score = 190 bits (484), Expect = 9e-47, Method: Composition-based stats.
Identities = 97/218 (44%), Positives = 140/218 (64%), Gaps = 3/218 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
+R+GV+A K GMT V+ + +R+P TVL LD QV+ RT +GY AVQVG G+ + +N
Sbjct: 80 LRTGVLAIKKGMTSVFVGK-KRVPATVLQLDQVQVLASRTRATHGYWAVQVGLGQKEPRN 138
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V++P+ G+F + V PK+ + EFRV+ +D LLPVG+ P +F GQ VDV + G+GF
Sbjct: 139 VTRPLLGYFEARGVFPKRHIAEFRVKGEDGLLPVGAQLRPDWFQKGQYVDVRSNSRGQGF 198
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP-GRVFKNKKMAGRMGGNRVTVKNLEV 179
+G MKRH F G A+HG S +HR+ G+ G Q RV KKM GRMG + TV+NL V
Sbjct: 199 AGGMKRHGFAGQPASHGNSKNHRTMGTAGPSQGSGSRVLPGKKMPGRMGNQQTTVQNLTV 258
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
+SVD++ G+++V G V G K + ++D+ K +
Sbjct: 259 LSVDNELGIVVVSGPVAGP-KGCVVKLQDAVKRKAPTQ 295
>gi|297569422|ref|YP_003690766.1| 50S ribosomal protein L3 [Desulfurivibrio alkaliphilus AHT2]
gi|296925337|gb|ADH86147.1| 50S ribosomal protein L3 [Desulfurivibrio alkaliphilus AHT2]
Length = 210
Score = 190 bits (484), Expect = 9e-47, Method: Composition-based stats.
Identities = 82/205 (40%), Positives = 116/205 (56%), Gaps = 2/205 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT +++ G IPVTV+ C V+ +TL K GY A+QVG G K + ++K
Sbjct: 6 GLLGKKMGMTRIFSETGTAIPVTVIEAGPCVVLQKKTLAKEGYNAIQVGFGAKKEQRLNK 65
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P +G + + EFRV D + F VG+LVDV + G+GF G
Sbjct: 66 PEKGHAKAAGKGGFYHIKEFRVADPDAYELGQEISMTEIFNVGELVDVRARSKGRGFQGV 125
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
+KRH F G RATHG S+ HR G+ GC P RV K KKM G+MG VT KN +V +
Sbjct: 126 VKRHGFKGGRATHG-SMFHRRPGAIGCSAWPSRVIKGKKMPGQMGDQFVTKKNCTIVDIR 184
Query: 184 DKRGLILVKGCVPGAKKNSWILVRD 208
++ +++VKG VPGA K + +
Sbjct: 185 PEQNVLVVKGGVPGA-KEGLVQIYK 208
>gi|188996239|ref|YP_001930490.1| ribosomal protein L3 [Sulfurihydrogenibium sp. YO3AOP1]
gi|226730578|sp|B2V7L3|RL3_SULSY RecName: Full=50S ribosomal protein L3
gi|188931306|gb|ACD65936.1| ribosomal protein L3 [Sulfurihydrogenibium sp. YO3AOP1]
Length = 226
Score = 190 bits (484), Expect = 9e-47, Method: Composition-based stats.
Identities = 93/220 (42%), Positives = 132/220 (60%), Gaps = 4/220 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT V+ + G+ IPVTV+ C V RT +K+GY AV + GE K KN
Sbjct: 1 MPKGIIGKKIGMTKVF-VNGKAIPVTVIQAGPCYVAYTRTQEKDGYNAVALTFGERKEKN 59
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+ KP+ F N+ P K + EF ++ + + P + + F G LVD+TG + G+GF
Sbjct: 60 IPKPLLAIFKKANIKPAKVIKEFPLKDGETVEPGQEIRIENVFEKGDLVDITGKSKGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+ MKR +F G +HG HR+ GS GCR +PGRV+K K+MAG G VTV LEVV
Sbjct: 120 TSVMKRWDFAGFPKSHG-HRYHRAVGSIGCRTEPGRVWKTKRMAGHYGNETVTVLGLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
+ ++ +ILVKG VPGA NS + ++ S A KGK+
Sbjct: 179 DIIPEKNVILVKGSVPGAP-NSTVFLKQSV-IADRRKGKL 216
>gi|297618384|ref|YP_003703543.1| 50S ribosomal protein L3 [Syntrophothermus lipocalidus DSM 12680]
gi|297146221|gb|ADI02978.1| 50S ribosomal protein L3 [Syntrophothermus lipocalidus DSM 12680]
Length = 212
Score = 190 bits (483), Expect = 9e-47, Method: Composition-based stats.
Identities = 82/210 (39%), Positives = 128/210 (60%), Gaps = 4/210 (1%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ KLGMT +++ R VTV+ C V+ +T+ +GY A+QVG G K ++
Sbjct: 7 KGLLGVKLGMTQLFDENDRATAVTVVEAGPCIVLQKKTVATDGYNAIQVGFGSVKESKIT 66
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP++G ++ NV P + + EFRV+ DD VG F G ++DVTG++ GKGF+G
Sbjct: 67 KPLKGHLANANVKPVRFIREFRVENIDD-YQVGQEIRVDIFKEGDIIDVTGISKGKGFAG 125
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRHNF HG S HR G+ G + P RVFK +K+ GR+GG +VTV+ L VV V
Sbjct: 126 GIKRHNFQRGAMAHG-SKYHRRPGALG-AKGPARVFKGRKLPGRLGGEKVTVQRLRVVKV 183
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
++ ++L+KG +PG ++ + +++S K+
Sbjct: 184 YPEKNILLIKGAIPGPRRG-LVTIKNSAKA 212
>gi|288803933|ref|ZP_06409356.1| 50S ribosomal protein L3 [Prevotella melaninogenica D18]
gi|302345074|ref|YP_003813427.1| 50S ribosomal protein L3 [Prevotella melaninogenica ATCC 25845]
gi|288333566|gb|EFC72018.1| 50S ribosomal protein L3 [Prevotella melaninogenica D18]
gi|302150099|gb|ADK96361.1| 50S ribosomal protein L3 [Prevotella melaninogenica ATCC 25845]
Length = 204
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 85/206 (41%), Positives = 123/206 (59%), Gaps = 5/206 (2%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G GEAK K SK
Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYKAVQLGFGEAKEKRTSK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P +G F +PKK L E K D+ +G + F+ + VDV G + GKGF G
Sbjct: 63 PQQGHFKKAGTTPKKHLAE---FKFDEEYNLGDTVTVELFSNAKFVDVVGTSKGKGFQGV 119
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G ++THG R GS G P +VFK +M G+MGG+RVT +NL+V+ V
Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLQVLKV 179
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRD 208
+ LILVKG V G S ++++
Sbjct: 180 IPEHNLILVKGSVAGC-NGSTVIIKK 204
>gi|238018623|ref|ZP_04599049.1| hypothetical protein VEIDISOL_00458 [Veillonella dispar ATCC 17748]
gi|237865094|gb|EEP66384.1| hypothetical protein VEIDISOL_00458 [Veillonella dispar ATCC 17748]
Length = 213
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 97/216 (44%), Positives = 131/216 (60%), Gaps = 5/216 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M ++ +KLGMT V+ EG+ +PVTV+ VV +T++ +GY AVQ+G G K K+
Sbjct: 1 MSKAILGKKLGMTQVFTAEGQLVPVTVVETTPSVVVRVKTVETDGYEAVQIGYGSIKEKH 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP++G F V+P K L E RV D VG + F G+LVDV G GKGF
Sbjct: 61 LTKPVKGQFDKAGVAPVKYLREVRVANAAD-YTVGQTLAADIFAEGELVDVVGTGKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGC--RQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
+G +KRHNF THG S SHR GS G G+V+K KK+ G+MGG RVTV+ L
Sbjct: 120 AGTIKRHNFSRGPETHG-SKSHREPGSIGPMISGGGGKVYKGKKLPGQMGGYRVTVQRLS 178
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V VD +R L+LVKG +PGA K S ++VR++ K
Sbjct: 179 VEKVDAERNLLLVKGGIPGA-KGSLVMVRNTVKPVK 213
>gi|126341656|ref|XP_001379787.1| PREDICTED: similar to Mitochondrial ribosomal protein L3
[Monodelphis domestica]
Length = 448
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 75/216 (34%), Positives = 112/216 (51%), Gaps = 5/216 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD--KNGYMAVQVGAGEAKVK 59
R G++A KLGM ++ +G++ VT+L + +C V+ + + A+ VG
Sbjct: 195 RVGLIAAKLGMMPLWTKDGKKFVVTLLQVQDCHVLKYTPKEECNRNRGALIVGGKNVSPF 254
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
S+ + + V V PK+K FRV D+ ++ G+ ++F GQ VDVT TIGKG
Sbjct: 255 YKSESLMQMYREVGVPPKQKFSTFRVT-DNAIIKPGTPLYAAHFRPGQYVDVTAKTIGKG 313
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G MKR F G A+HG + +HR G+ D RV+ KKM G+MG T L+V
Sbjct: 314 FQGVMKRWGFKGQPASHGQTKTHRRPGAIAT-GDIARVWPGKKMPGKMGNRYRTEFGLKV 372
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
++ K +I V G VPG +N + +RDS
Sbjct: 373 WRINTKHDIIYVNGSVPG-HRNCLVKIRDSILPPYK 407
>gi|303246993|ref|ZP_07333269.1| 50S ribosomal protein L3 [Desulfovibrio fructosovorans JJ]
gi|302491700|gb|EFL51583.1| 50S ribosomal protein L3 [Desulfovibrio fructosovorans JJ]
Length = 210
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 86/205 (41%), Positives = 116/205 (56%), Gaps = 2/205 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ RKLGMT V+ +G IPVTV+ C V +T +K+GY A+Q+G + V+K
Sbjct: 6 GILGRKLGMTRVFGDDGSIIPVTVIEAGPCPVTQVKTEEKDGYNAMQIGFDTIPERKVNK 65
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P +G + L E R + F G+ V +TG +IGKGF+G
Sbjct: 66 PEKGHMDKAGRGYFRTLRELRCDGPAAFELGMD-VTVDIFAPGETVKITGTSIGKGFAGV 124
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
MKRHNF GL+ THG +HRS GS G +PG+V K K+MAG MG VTV ++VV V
Sbjct: 125 MKRHNFAGLKKTHGTEKAHRSGGSIGNNTEPGKVMKGKRMAGHMGARTVTVSGIQVVDVR 184
Query: 184 DKRGLILVKGCVPGAKKNSWILVRD 208
+ LILVKG VPG +N ++VR
Sbjct: 185 PEMNLILVKGQVPGP-RNCVVMVRK 208
>gi|227494545|ref|ZP_03924861.1| ribosomal protein L3 [Actinomyces coleocanis DSM 15436]
gi|226832279|gb|EEH64662.1| ribosomal protein L3 [Actinomyces coleocanis DSM 15436]
Length = 221
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 94/211 (44%), Positives = 131/211 (62%), Gaps = 2/211 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
++ RKLGMT V++ +GR +PVTV+ + V RT + +GY A Q+G GE + ++
Sbjct: 13 KALLGRKLGMTQVWDNDGRVVPVTVVQVGTNVVTQVRTEEVDGYTAAQIGFGEVDARRIT 72
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP+ G F V+P++ L E R D +G S F G VDV+G + GKGF+G
Sbjct: 73 KPLAGHFEKAGVAPRRHLVEVRTSDVDA-FELGQELLASVFEAGDKVDVSGKSKGKGFAG 131
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
AMKRH F G A+HG +HR GS G PGRVFK +MAGRMG R TV+NL++ +V
Sbjct: 132 AMKRHGFRGAPASHGAHRNHRKPGSIGACATPGRVFKGVRMAGRMGNVRRTVQNLDIHAV 191
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D ++GL+L+ G +PG KN+ +LVR+S K A
Sbjct: 192 DVEKGLLLIHGAIPGP-KNAVVLVRNSVKGA 221
>gi|33862114|ref|NP_893675.1| 50S ribosomal protein L3 [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
gi|42559598|sp|Q7UZU7|RL3_PROMP RecName: Full=50S ribosomal protein L3
gi|33634332|emb|CAE20017.1| 50S ribosomal protein L3 [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
Length = 217
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 81/208 (38%), Positives = 129/208 (62%), Gaps = 3/208 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGM+ +++ +G +PVT++ C+V +T +GY A+Q+G G +K K+
Sbjct: 1 MSIGILGKKLGMSQLFDKDGNAVPVTLIEAGPCRVTQLKTQPLDGYTAIQIGYGVSKDKH 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+SKP +G K L E+RV+++ +G + + F VGQ VD++G ++G+GF
Sbjct: 61 LSKPEKGHLLKSGEILLKHLKEYRVEENSS-YEIGKEITVTNFEVGQKVDISGKSMGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
SG KRH F +HG S +HR+ GSTG PGR++ K+MAGR GG ++T K L VV
Sbjct: 120 SGYQKRHGFSRGPMSHG-SKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKKITTKGLLVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
+DD++ L++VKG VPG S + ++
Sbjct: 179 KIDDQKNLLVVKGSVPGKP-GSIVNIKP 205
>gi|298373698|ref|ZP_06983687.1| 50S ribosomal protein L3 [Bacteroidetes oral taxon 274 str. F0058]
gi|298274750|gb|EFI16302.1| 50S ribosomal protein L3 [Bacteroidetes oral taxon 274 str. F0058]
Length = 206
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 80/204 (39%), Positives = 123/204 (60%), Gaps = 3/204 (1%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT V++ +G+ P TV+ + C V +T++K+GY A Q+G E K K+ +K
Sbjct: 3 GLIGKKVGMTSVFSADGKNTPCTVIEVGPCVVTQVKTVEKDGYQAYQLGFEEKKEKHTNK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
G F VS ++ L EF+ D +L +V + + F VDV G++ GKGF G
Sbjct: 63 AEAGHFKKAGVSARRNLVEFK-SFDKELKAGDTVTADAVFEENDFVDVVGISKGKGFQGV 121
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G + THG R+ GS G P +V K +MAGR GG+RVT++NL+VV +
Sbjct: 122 VKRHGFGGVGQQTHGQHNRGRAPGSMGASSYPSKVVKGMRMAGRTGGDRVTIQNLQVVKI 181
Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
+ +++VKG +PGA K S +L+
Sbjct: 182 IPEHNIVMVKGSIPGA-KGSIVLI 204
>gi|157414163|ref|YP_001485029.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9215]
gi|166990938|sp|A8G762|RL3_PROM2 RecName: Full=50S ribosomal protein L3
gi|157388738|gb|ABV51443.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9215]
Length = 217
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 80/208 (38%), Positives = 128/208 (61%), Gaps = 3/208 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGM+ +++ +G +PVT++ C+V +T +GY A+Q+G G +K K+
Sbjct: 1 MSIGILGKKLGMSQLFDDKGNAVPVTLIEAGPCRVTQLKTNALDGYTAIQIGYGVSKEKH 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+SKP +G K L E+RV++ +G+ + F VGQ VD++G ++G+GF
Sbjct: 61 ISKPEKGHLLKSGEELLKHLKEYRVEETSS-YEIGNQITVKNFEVGQKVDISGKSMGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
SG KRH F +HG S +HR+ GSTG PGR++ K+MAGR GG ++T K L V+
Sbjct: 120 SGYQKRHGFSRGPMSHG-SKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKQITTKGLLVL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
+DD++ L++VKG VPG S + ++
Sbjct: 179 KIDDQKNLLVVKGSVPGKP-GSIVNIKP 205
>gi|81829049|sp|Q6ME63|RL3_PARUW RecName: Full=50S ribosomal protein L3
gi|46399687|emb|CAF23136.1| probable 50S ribosomal protein L3 [Candidatus Protochlamydia
amoebophila UWE25]
Length = 235
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 77/222 (34%), Positives = 114/222 (51%), Gaps = 10/222 (4%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK--- 57
M ++ +K GM +++ +G I TV+ + + +T + +GY A+Q+G +
Sbjct: 15 MALTMMGKKRGMIQLFDEKGNAIVCTVIQAEPNVITQIKTKETDGYTALQLGFEKVTGKT 74
Query: 58 ----VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTG 113
KP G F V ++ L E R+ ++ +G S F + VD T
Sbjct: 75 QHTIEARTGKPRLGHFKKAGVESRRFLVESRLDSTEE-YTLGQEISVDTFNGIEFVDATA 133
Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
++ GKG+ G MKRHNF G A+HG S HR GSTG R PGR K AG+MG RVT
Sbjct: 134 ISKGKGYQGVMKRHNFAGGPASHG-SGHHRHAGSTGMRSTPGRGLPGGKKAGQMGNERVT 192
Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
V+NL +V VD + +I+VKG VPG +N + + + K A
Sbjct: 193 VQNLRIVKVDSENHVIVVKGQVPGP-RNGLVYITQAKKLAKK 233
>gi|123969297|ref|YP_001010155.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. AS9601]
gi|166233179|sp|A2BTD7|RL3_PROMS RecName: Full=50S ribosomal protein L3
gi|123199407|gb|ABM71048.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. AS9601]
Length = 217
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 81/208 (38%), Positives = 127/208 (61%), Gaps = 3/208 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGM+ +++ +G +PVT++ C+V +T +GY AVQ+G G +K K+
Sbjct: 1 MSIGILGKKLGMSQLFDDKGNSVPVTLIEAGPCRVTQLKTTALDGYTAVQIGYGLSKEKH 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+SKP +G K L E+RV++ +G + F VGQ VD++G ++G+GF
Sbjct: 61 LSKPEKGHLLKSGEELLKHLKEYRVEETSS-YEIGKQITVKNFEVGQKVDISGKSMGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G KRH F +HG S +HR+ GSTG PGR++ K+MAGR GG ++T K L V+
Sbjct: 120 AGYQKRHGFSRGPMSHG-SKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKQITTKGLLVL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
+DD++ L++VKG VPG S I ++
Sbjct: 179 KIDDQKNLLVVKGSVPGKP-GSIINIKP 205
>gi|189460684|ref|ZP_03009469.1| hypothetical protein BACCOP_01331 [Bacteroides coprocola DSM 17136]
gi|189432643|gb|EDV01628.1| hypothetical protein BACCOP_01331 [Bacteroides coprocola DSM 17136]
Length = 205
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 81/204 (39%), Positives = 122/204 (59%), Gaps = 4/204 (1%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT V++ +G+ +P TV+ C V ++++K+GY AVQVG + K K+ +K
Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKSVEKDGYAAVQVGFQDKKEKHTTK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P+ G F V+PK+ L EF+ ++ L +G + F VDV G + GKGF G
Sbjct: 63 PLMGHFKKAGVTPKRHLAEFKDFSEE--LNLGDTITVELFNDASYVDVIGTSKGKGFQGV 120
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G + THG R GS G P +VFK +M G+MGG+RVT NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTHNLQVLKV 180
Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
+ L+L+KG VPG K S +++
Sbjct: 181 IPEHNLLLIKGSVPGC-KGSIVII 203
>gi|255722617|ref|XP_002546243.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240136732|gb|EER36285.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 279
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 94/210 (44%), Positives = 127/210 (60%), Gaps = 1/210 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G+ A K GM + G IP TVL +D+C+V+ + + GY ++ VG+ + N
Sbjct: 57 RPGLFAIKRGMITWFRESGEAIPATVLEIDSCEVINSKNSEDYGYDSILVGSIDKLKNNK 116
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+ F +SPK K+ EFRV K D+L+ G+ + YF VGQ VD+ G+T GKGF+
Sbjct: 117 YETSIKMFEDAGISPKYKIGEFRVLKSDNLIEKGTELTADYFEVGQKVDIKGITKGKGFA 176
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR F G RATHGVS +HR+ G+ G Q+PGRV KKM GRMG N T NLEV+
Sbjct: 177 GVMKRWGFSGGRATHGVSKAHRTPGAMGGNQNPGRVLPGKKMPGRMGCNNKTEFNLEVLF 236
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
D + G+++VKG VPG K + VRD+ K
Sbjct: 237 TDKEAGVLIVKGNVPGP-KRGIVRVRDAIK 265
>gi|33519658|ref|NP_878490.1| 50S ribosomal subunit protein L3 [Candidatus Blochmannia
floridanus]
gi|42559603|sp|Q7VQE8|RL3_BLOFL RecName: Full=50S ribosomal protein L3
gi|33517321|emb|CAD83706.1| 50S ribosomal subunit protein L3 [Candidatus Blochmannia
floridanus]
Length = 219
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 89/208 (42%), Positives = 129/208 (62%), Gaps = 1/208 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G+V RKLGMT + N EG I VT++ + V + +K+GY AVQV G + K ++K
Sbjct: 3 GLVGRKLGMTRIINEEGIMIAVTMIEILPHYVTQVKNKEKDGYCAVQVTTGNTRDKCLNK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P G + ++ K L+EFR+ + L+ VG +F+ VDVTG++ GKGF+GA
Sbjct: 63 PKLGHLKKLGINYGKGLWEFRLNDSNRLISVGDIFTLKVLKCINKVDVTGISKGKGFAGA 122
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
+KR NF A+HG S+SHR+ GS G Q PG+VFK KKMAG +G + T++NL V+++D
Sbjct: 123 VKRWNFRTQDASHGNSLSHRAPGSIGQNQTPGKVFKGKKMAGHLGYEKATIQNLAVINID 182
Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
K L+LVKG +PG ++V+ S K
Sbjct: 183 IKNNLLLVKGAIPG-VIGENVIVKRSVK 209
>gi|217077283|ref|YP_002335001.1| ribosomal protein L3 [Thermosipho africanus TCF52B]
gi|226730580|sp|B7IHU6|RL3_THEAB RecName: Full=50S ribosomal protein L3
gi|217037138|gb|ACJ75660.1| ribosomal protein L3 [Thermosipho africanus TCF52B]
Length = 205
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 87/208 (41%), Positives = 123/208 (59%), Gaps = 6/208 (2%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ RK+GMT ++ + + IPVTV+ C VV +T+D +GY A+Q+G EAK V+KP
Sbjct: 4 IIGRKVGMTRIFKDD-KVIPVTVIKAGPCYVVQKKTIDTDGYNAIQIGFEEAKK--VNKP 60
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
M G F V P K L EFRV+ ++ +G F G +D+TG + G+GF+GAM
Sbjct: 61 MEGVFKKAGVKPLKILKEFRVENPEE-FELGQEIKVDIFAEGDKIDITGWSKGRGFAGAM 119
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR F G +HG HR GS G +P R+FK KKM G+ G RVT+ N E+V +D
Sbjct: 120 KRWGFRGGPKSHGAK-FHRELGSVGQHSEPARIFKGKKMPGQYGNERVTILNSEIVKIDV 178
Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212
+ LI VKG VPGA + +L+R + +
Sbjct: 179 ENNLIAVKGGVPGA-RGGLVLIRTAKRG 205
>gi|85110563|ref|XP_963521.1| 60S ribosomal protein L3, mitochondrial precursor [Neurospora
crassa OR74A]
gi|28881355|emb|CAD70397.1| related to ribosomal protein L3 precursor, mitochondrial
[Neurospora crassa]
gi|28925204|gb|EAA34285.1| 60S ribosomal protein L3, mitochondrial precursor [Neurospora
crassa OR74A]
Length = 384
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 101/219 (46%), Positives = 138/219 (63%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
+R+GV+A K GMT G RIP TVL LD QVV ++T KNGY AVQVG GE + +N
Sbjct: 106 LRTGVLAVKKGMTVFMGRTGARIPCTVLQLDRVQVVANKTRAKNGYWAVQVGLGERRAEN 165
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V P G++ + + PK+ L EF+V+ D LLPVG P +F VGQ+VDV G+T G GF
Sbjct: 166 VGAPQLGYYEAKGIPPKQTLAEFKVRNQDGLLPVGVQLFPDWFHVGQVVDVRGITRGMGF 225
Query: 121 SGAMKRHNFGGLRATHGVSISHRSH-GSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
+G MKRH F G A+HG S++HR+ G + RV KKM GRMG + TV+NL +
Sbjct: 226 AGGMKRHGFAGQEASHGNSLNHRTIGSVGGSQGSGSRVLPGKKMPGRMGAQQHTVQNLPI 285
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+ VD++ G+++VKG V G K + + V+D+ K A +
Sbjct: 286 LMVDNELGIVVVKGAVAG-HKGAVVKVQDAVKKAPPPEE 323
>gi|116748990|ref|YP_845677.1| 50S ribosomal protein L3 [Syntrophobacter fumaroxidans MPOB]
gi|166990941|sp|A0LIJ0|RL3_SYNFM RecName: Full=50S ribosomal protein L3
gi|116698054|gb|ABK17242.1| LSU ribosomal protein L3P [Syntrophobacter fumaroxidans MPOB]
Length = 210
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 78/213 (36%), Positives = 120/213 (56%), Gaps = 3/213 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M +V RKL M+ ++ +G +P+T++ C V +T +++GY A+Q+G G K KN
Sbjct: 1 MIKAIVGRKLQMSQIFAEDGTAVPITLIQAGPCTVTQVKTPERDGYSALQIGFGSRKPKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KPM+G V + L E R++ D + F +G+ +DV G T GKG+
Sbjct: 61 VNKPMKGHLDKVGKGYFEVLREIRMENASDHEVGED-LAADVFEIGERIDVIGTTKGKGY 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR F + HG S + R GSTG PGRV K KKM G+ G R TV NL ++
Sbjct: 120 AGTIKRWGFQRGPSGHG-SKNIREPGSTGNATFPGRVIKGKKMPGQKGNKRTTVMNLRII 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
V + L++VKG VPG++ N +L+R + ++
Sbjct: 179 DVRPEENLLIVKGAVPGSQ-NGIVLIRKTNRAK 210
>gi|189501211|ref|YP_001960681.1| 50S ribosomal protein L3 [Chlorobium phaeobacteroides BS1]
gi|226725147|sp|B3EP61|RL3_CHLPB RecName: Full=50S ribosomal protein L3
gi|189496652|gb|ACE05200.1| ribosomal protein L3 [Chlorobium phaeobacteroides BS1]
Length = 209
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 88/207 (42%), Positives = 119/207 (57%), Gaps = 1/207 (0%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ +K+GMT +YN P TV+ C V +T + +GY A Q+ GE K VSKP
Sbjct: 4 ILGKKIGMTSIYNANREAEPCTVIQAGPCFVSQVKTTENDGYEAYQLSIGERKEAKVSKP 63
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+RG F+ ++P K+ EF L GS S F+ G V+V G++ GKGF+G +
Sbjct: 64 LRGHFAKAGIAPGYKVVEFGKDDMGLDLEQGSAVSVEIFSAGDAVEVQGVSKGKGFAGVV 123
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KRHNF G + THG S R+ GS G DP R FK KM GRMGG V VK LE+V V
Sbjct: 124 KRHNFSGGQRTHGQSDRLRAPGSVGGASDPSRTFKGTKMGGRMGGKTVKVKGLEIVKVIP 183
Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFK 211
+ L+++KG VPG KNS++ + S K
Sbjct: 184 ESNLLVIKGSVPG-VKNSYVQIVSSKK 209
>gi|94987402|ref|YP_595335.1| 50S ribosomal protein L3 [Lawsonia intracellularis PHE/MN1-00]
gi|123385030|sp|Q1MPR3|RL3_LAWIP RecName: Full=50S ribosomal protein L3
gi|94731651|emb|CAJ55014.1| 50S ribosomal protein L3 [Lawsonia intracellularis PHE/MN1-00]
Length = 210
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 90/205 (43%), Positives = 127/205 (61%), Gaps = 1/205 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
+ G++ +KLGMT V+ G +PVTV+ C +V +T++K GY A+Q+ GE K K+V
Sbjct: 4 KIGILGQKLGMTQVFGGNGFAVPVTVVQAGPCPIVQIKTVEKEGYNALQIAFGEGKKKHV 63
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SK M+G FS +S +K+ E R++ VG V + F+VG V +TG +IGKGF
Sbjct: 64 SKSMQGHFSKAGLSLYRKIQEVRLKGSLTSYEVGQVLTVGLFSVGDKVKITGKSIGKGFQ 123
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
GAM+R NF G + +HG HR+ GS G PG VFK KKMAG G +VTV+NL VV
Sbjct: 124 GAMRRWNFAGSKDSHGCEKVHRAAGSIGNNTFPGHVFKGKKMAGHWGTEKVTVQNLVVVD 183
Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206
+ + +IL+ G VPG KNS++ +
Sbjct: 184 IRPEDNIILIHGSVPGP-KNSFLFI 207
>gi|212550451|ref|YP_002308768.1| 50S ribosomal protein L3 [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|226725128|sp|B6YQ85|RL3_AZOPC RecName: Full=50S ribosomal protein L3
gi|212548689|dbj|BAG83357.1| 50S ribosomal protein L3 [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 204
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 87/206 (42%), Positives = 126/206 (61%), Gaps = 5/206 (2%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT ++++EG+ +P TV+ + C V +T+DK+GY AVQVG + K K+ +K
Sbjct: 3 GLIGKKIGMTSIFSVEGKNLPCTVMEVGPCVVTQVKTVDKDGYEAVQVGFEDKKEKHTTK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P RG F VS K+ L EF K+ G V + +F G VDV G++ GKGF G
Sbjct: 63 PERGHFKRAGVSFKRYLAEF---KEQGKYKEGDVITVDFFNKGIYVDVVGISKGKGFQGV 119
Query: 124 MKRHNFG-GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F AT G S R GS G P +VFK +MAG+MG +VT++NLEV+ +
Sbjct: 120 VKRHGFRGVGEATLGQSDRQRHPGSIGACSYPAKVFKGTRMAGQMGNTKVTIQNLEVIEL 179
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRD 208
K L++VKG VPG+ K S ++V+
Sbjct: 180 ISKYNLLIVKGSVPGS-KGSILIVKK 204
>gi|189183951|ref|YP_001937736.1| 50S ribosomal protein L3 [Orientia tsutsugamushi str. Ikeda]
gi|189180722|dbj|BAG40502.1| 50S ribosomal protein L3 [Orientia tsutsugamushi str. Ikeda]
Length = 227
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 108/211 (51%), Positives = 144/211 (68%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
RSG++A KLGM+ ++ GR++ +T+L +D CQV+ H+ + K+GY AV +G V
Sbjct: 16 RSGLIAEKLGMSSKFDENGRKVAITLLKVDVCQVLWHKLVSKDGYNAVILGYKNISPFKV 75
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
KPMR FS + PK + EF+V +D +L + S+ SYF VGQ VDV G+TIGKGF+
Sbjct: 76 KKPMRSIFSRAKIEPKAVIKEFKV-AEDRMLEIASILDASYFRVGQYVDVRGITIGKGFA 134
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
GAMKRH F GL A+HGVSISHRSHGSTG R PGR FKNKKMAG MG T++NL+V S
Sbjct: 135 GAMKRHGFRGLEASHGVSISHRSHGSTGNRAYPGRTFKNKKMAGHMGVKFATIQNLKVDS 194
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD ++ L+++KG +PG S + + DS K
Sbjct: 195 VDLEKRLLVIKGSIPGKS-GSIVYITDSIKK 224
>gi|296228096|ref|XP_002759663.1| PREDICTED: 39S ribosomal protein L3, mitochondrial-like isoform 2
[Callithrix jacchus]
Length = 348
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 80/216 (37%), Positives = 117/216 (54%), Gaps = 5/216 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAVQVGAGE-AKVK 59
R G+VA KLGM ++ +G+R VT+L + +C V+ + + + +G MA G+
Sbjct: 96 RVGLVAVKLGMMPLWTKDGQRHVVTLLQVRDCHVLKYISKENHDGKMAALSVGGKTVSRF 155
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+ S + F+ + + PK+K+ FR+ D+ L G+ ++F GQ VDVT TIGKG
Sbjct: 156 HKSTQILEFYRELGLPPKQKVKIFRIT-DNAALKPGTPLYAAHFRPGQYVDVTAKTIGKG 214
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G MKR F G ATHG + +HR G+ D RV+ K+ G+MG TV L+V
Sbjct: 215 FQGVMKRWGFKGQPATHGQTKTHRRPGAIST-GDVARVWPGTKLPGQMGNIDRTVHGLKV 273
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
++ K +I V G VPG KN + VRDS A
Sbjct: 274 WRINTKHNIIYVNGSVPG-HKNCLVKVRDSKLPAYK 308
>gi|256830538|ref|YP_003159266.1| ribosomal protein L3 [Desulfomicrobium baculatum DSM 4028]
gi|256579714|gb|ACU90850.1| ribosomal protein L3 [Desulfomicrobium baculatum DSM 4028]
Length = 210
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 79/204 (38%), Positives = 116/204 (56%), Gaps = 1/204 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G+V RK+GMT +Y +G IPVTV+ C V+ + +K+GY A+QVG E ++K
Sbjct: 6 GIVGRKIGMTRIYGADGNVIPVTVIQAGPCPVIEKKVSEKDGYTAIQVGFEEVAAHRLTK 65
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P +G N K L E R+ D+ +G + FT G+ + VTG + G+GF+G
Sbjct: 66 PEQGHQQKANCGFYKMLKEIRLGSVDE-YEIGQKLTVEMFTPGEKIRVTGTSKGRGFAGV 124
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
++R NF G A+HG HR GS G P +VFK KKM G++G T+ NLE+V V
Sbjct: 125 IRRWNFSGAPASHGHEKVHRKPGSIGQCAWPSKVFKGKKMPGQLGNKTATMLNLEIVDVR 184
Query: 184 DKRGLILVKGCVPGAKKNSWILVR 207
+ ++LV+G VPG K+ +L +
Sbjct: 185 PEDNVVLVRGQVPGPKQGIVVLSK 208
>gi|300812343|ref|ZP_07092778.1| 50S ribosomal protein L3 [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300496648|gb|EFK31735.1| 50S ribosomal protein L3 [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 209
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 80/214 (37%), Positives = 120/214 (56%), Gaps = 5/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT ++ +G +PVTV+ V+ +T++ +GY AVQ+G + +
Sbjct: 1 MTKGILGRKVGMTQIFTKDGVLVPVTVIEATPNVVMQVKTVENDGYEAVQLGYQDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G SPK+ + E R + D VGS + F G +V+VTG + G G+
Sbjct: 61 SNKPEKGHADKAKTSPKRFIRELRGVELSD-YEVGSETTVETFKEGDVVNVTGTSRGHGY 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH+ THG S HR GS G RV K KK+ G MG VT++NL V
Sbjct: 120 QGNIKRHHQSRGPETHG-SRYHRIPGSMGSI--INRVPKGKKLPGHMGVKTVTIENLVVE 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V + ++++KG VPGA KNS I+V+ S K++
Sbjct: 177 KVVADKNVLMIKGNVPGA-KNSLIIVKSSAKASK 209
>gi|254495341|ref|ZP_05108265.1| 50S ribosomal protein L3 [Polaribacter sp. MED152]
gi|213690665|gb|EAQ40852.2| 50S ribosomal protein L3 [Polaribacter sp. MED152]
Length = 195
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 79/198 (39%), Positives = 120/198 (60%), Gaps = 4/198 (2%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
MT +++ G+ IP TV+ C V RT + +GY A+Q+G + K K+ +K + G F
Sbjct: 1 MTSLFDENGKNIPCTVIEAGPCVVTQVRTEEVDGYNALQLGFDDKKAKSSNKALDGHFKK 60
Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF-G 130
+ KKK+ EF+ +++ +G + +FT G+ VDV+G + GKGF G +KRH F G
Sbjct: 61 AGTTAKKKVVEFQGFEEE--YKLGDAITVEHFTEGEFVDVSGTSKGKGFQGVVKRHGFGG 118
Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190
+ATHG R+ GS G P RVFK +MAGRMGG +V V+NL V+ V ++ L++
Sbjct: 119 VGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGRMGGEKVKVQNLRVLKVVAEKNLLV 178
Query: 191 VKGCVPGAKKNSWILVRD 208
VKG VPG KN+++ ++
Sbjct: 179 VKGAVPG-HKNAFVTIQK 195
>gi|313897304|ref|ZP_07830848.1| 50S ribosomal protein L3 [Clostridium sp. HGF2]
gi|312958025|gb|EFR39649.1| 50S ribosomal protein L3 [Clostridium sp. HGF2]
Length = 228
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 77/219 (35%), Positives = 113/219 (51%), Gaps = 6/219 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RKLGMT V+ +G IPVTV+ V+ +T++ +GY AVQ+G + K
Sbjct: 1 MKGILGRKLGMTQVFTEDGTLIPVTVVEACPNVVLQKKTVENDGYEAVQLGFEDVKETRS 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+K G + N +PK+ + E R + DL + F+ G+ VDV G + GKGF
Sbjct: 61 TKGEAGHAAKANTAPKRFVKEVRDSEFADLELGAE-VNVGIFSAGETVDVIGTSKGKGFM 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGR---VFKNKKMAGRMGGNRVTVKNLE 178
G + R+N +HG S HR GS R + K MAG+ GG R T +NL
Sbjct: 120 GTIVRNNAKIGPKSHG-SGHHRHIGSLATNGITSRQGKILKGTMMAGQEGGYRTTNQNLT 178
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
V+ VD + +L+KG VPG K ++VR + S N +
Sbjct: 179 VIKVDVENNYLLIKGNVPGP-KRGMVMVRTAKCSKGNTE 216
>gi|256420659|ref|YP_003121312.1| ribosomal protein L3 [Chitinophaga pinensis DSM 2588]
gi|256035567|gb|ACU59111.1| ribosomal protein L3 [Chitinophaga pinensis DSM 2588]
Length = 205
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 77/208 (37%), Positives = 114/208 (54%), Gaps = 4/208 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT +++ GR+ VT++ C V +T++ +GY A+QV GE K KN
Sbjct: 1 MKGIIGKKIGMTSIFDQNGRQTAVTIIEAGPCVVTQVKTVETDGYNAIQVSFGEKKEKNT 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
K F+ + SPK+ + EFR D +G + F G+ +DV G + GKGF
Sbjct: 61 PKAELNHFAKASTSPKRFVKEFR--NPDVQKALGETITTEIFAEGETIDVVGTSKGKGFQ 118
Query: 122 GAMKRHNFG-GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH F ATHG R+ GS G P RVFK +MAG+ G +V VK L++V
Sbjct: 119 GVVKRHGFSGVGEATHGQHDRSRAPGSVGGSSYPSRVFKGMRMAGQTGNEQVKVKGLKIV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
+ ++ ILV G VPG S +L++
Sbjct: 179 KIFAEKNYILVSGSVPG-HNGSIVLIQK 205
>gi|198274003|ref|ZP_03206535.1| hypothetical protein BACPLE_00139 [Bacteroides plebeius DSM 17135]
gi|198273081|gb|EDY97350.1| hypothetical protein BACPLE_00139 [Bacteroides plebeius DSM 17135]
Length = 205
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 81/204 (39%), Positives = 122/204 (59%), Gaps = 4/204 (1%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT V++ +G+ +P TV+ C V ++++K+GY AVQVG + K K+ +K
Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKSVEKDGYAAVQVGFQDKKEKHTTK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P+ G F V+PK+ L EF+ ++ L +G + F VDV G + GKGF G
Sbjct: 63 PLMGHFKKAGVTPKRHLAEFKDFSEE--LNLGDTITVELFNDTAYVDVIGTSKGKGFQGV 120
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G + THG R GS G P +VFK +M G+MGG+RVT NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTHNLQVLKV 180
Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
+ L+L+KG VPG K S +++
Sbjct: 181 IPEHNLLLIKGSVPGC-KGSIVII 203
>gi|317503980|ref|ZP_07961988.1| 50S ribosomal protein L3 [Prevotella salivae DSM 15606]
gi|315665006|gb|EFV04665.1| 50S ribosomal protein L3 [Prevotella salivae DSM 15606]
Length = 204
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 82/206 (39%), Positives = 121/206 (58%), Gaps = 5/206 (2%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT V++ +G+ +P TV+ C V +T +K+GY A+Q+G EAK SK
Sbjct: 3 GLIGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTEEKDGYKALQLGFEEAKENRTSK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
PM G F +PKK L EF K ++ +G + F+ + VD+ G + GKGF G
Sbjct: 63 PMMGTFKKAGTTPKKHLAEF---KFNEEYNLGDTLTVEIFSDAKFVDIVGTSKGKGFQGV 119
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G ++THG R GS G P +VFK +M G+MGG+RVT +NL+V+ V
Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLQVLKV 179
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRD 208
+ L+LVKG V G S +L++
Sbjct: 180 IPEHNLLLVKGSVAGC-NGSTVLIKK 204
>gi|242620043|ref|YP_003002047.1| 50S ribosomal protein L3 [Aureococcus anophagefferens]
gi|239997288|gb|ACS36811.1| 50S ribosomal protein L3 [Aureococcus anophagefferens]
Length = 210
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 83/208 (39%), Positives = 120/208 (57%), Gaps = 3/208 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ K+GMT + + G +PVT+L C V +T++ +GY A Q+G + K
Sbjct: 1 MPLGILGNKIGMTQIVDDLGNLVPVTILRAGPCTVTQIKTVETDGYSAAQLGYAQVTSKV 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP G V + L E+++ D L +G F+ G +VDVTG +IGKGF
Sbjct: 61 LTKPQIGHLEKVGAPLLRYLHEYKIS-DTSELSLGQTIGVDIFSAGSVVDVTGKSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G KR+NFG THG S +HR+ GS G PGRV+ KKMAG +G +VT+K L+V+
Sbjct: 120 AGLQKRYNFGRGPMTHG-SKNHRAPGSIGAGTTPGRVYPGKKMAGHLGAKQVTIKKLKVL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
VD + LI+VKG VPG N I ++
Sbjct: 179 IVDAENNLIIVKGAVPGKPGN-LISIQP 205
>gi|295425652|ref|ZP_06818339.1| 50S ribosomal protein L3 [Lactobacillus amylolyticus DSM 11664]
gi|295064668|gb|EFG55589.1| 50S ribosomal protein L3 [Lactobacillus amylolyticus DSM 11664]
Length = 212
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 78/217 (35%), Positives = 118/217 (54%), Gaps = 5/217 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT ++ +G +PVTV+ V+ +T++ +GY AVQ+G + +
Sbjct: 1 MTKGILGRKVGMTQIFTKDGALVPVTVVEATPNVVMQVKTVESDGYDAVQLGYQDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + SPK+ + E R + + VGS + F G +VDVTG T G G+
Sbjct: 61 SNKPEKGHAAKAKTSPKRFIREIRGVELKN-YEVGSEVTVDTFKEGDVVDVTGTTRGHGY 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR THG S HR GS G RV K K + G MG +VT++NL +
Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSI--INRVPKGKHLPGHMGVKKVTIENLVIE 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
V + ++++KG VPGA KNS I+V+ + K K
Sbjct: 177 KVVADKNVLMIKGNVPGA-KNSLIVVKTASKVTDAAK 212
>gi|148689150|gb|EDL21097.1| mitochondrial ribosomal protein L3, isoform CRA_b [Mus musculus]
Length = 292
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 75/220 (34%), Positives = 111/220 (50%), Gaps = 5/220 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNG--YMAVQVGAGEAKVK 59
R G++A KLGM ++ +G++ VT+L + +C V+ + + + A+ VG
Sbjct: 40 RVGLIALKLGMMPLWTKDGQKHAVTLLQVQDCHVLKYTPKEDHNGKIAALTVGGKTVSRF 99
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
F+ + + PK+ F V D+ ++ G+ ++F GQ VDVT TIGKG
Sbjct: 100 YKPDSRLEFYRDLGLPPKQIHKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGKG 158
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G MKR F G A+HG + +HR G+ D RV+ KM GRMG TV L+V
Sbjct: 159 FQGVMKRWGFKGQPASHGQTKTHRRPGAIST-GDIARVWPGTKMPGRMGNQNRTVYGLKV 217
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
V+ K +I V G VPG KN + ++DS A K
Sbjct: 218 WRVNTKHNIIYVNGSVPG-HKNCLVKIKDSTLPAYKDSCK 256
>gi|320166925|gb|EFW43824.1| mitochondrial ribosomal protein L3 [Capsaspora owczarzaki ATCC
30864]
Length = 566
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 84/215 (39%), Positives = 126/215 (58%), Gaps = 4/215 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+GV+A K+GM +N G+R+P+TVL + + V+ R + +GY A+Q+ AGE K
Sbjct: 324 RTGVIATKVGMMHTWNHWGQRLPLTVLQISDAAVLDFRVPESHGYTALQIAAGEIKQPA- 382
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
K + G F V ++ +K + EFRV + L+P G+ ++F GQ VDV T G+GF+
Sbjct: 383 -KHVEGTFRRVGLTARKHIHEFRVTANA-LIPPGTRLYAAHFIPGQHVDVLANTKGRGFA 440
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRH G A+HG S+ HR+ GS G GRV+ K+MAG MG NL V
Sbjct: 441 GVMKRHGMKGSPASHGHSLVHRAMGSFGGGGGMGRVYPGKRMAGHMGTIPAMHHNLLVYR 500
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
++ K L+ VKG VPG +K +++ +RD+ ++
Sbjct: 501 INTKHNLVYVKGSVPGPRK-AFVYLRDAVRAPNKR 534
>gi|224023618|ref|ZP_03641984.1| hypothetical protein BACCOPRO_00325 [Bacteroides coprophilus DSM
18228]
gi|224016840|gb|EEF74852.1| hypothetical protein BACCOPRO_00325 [Bacteroides coprophilus DSM
18228]
Length = 205
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 81/204 (39%), Positives = 122/204 (59%), Gaps = 4/204 (1%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT V++ +G+ +P TV+ C V ++++K+GY AVQVG + K K+ +K
Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKSVEKDGYAAVQVGFQDMKEKHTTK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P+ G F V+PK+ L EF+ ++ L +G + F VDV G + GKGF G
Sbjct: 63 PLMGHFKKAGVTPKRHLAEFKDFSEE--LNLGDTITVELFNDANYVDVIGTSKGKGFQGV 120
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G + THG R GS G P +VFK +M G+MGG+RVT NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTHNLQVLKV 180
Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
+ L+L+KG VPG K S +++
Sbjct: 181 IPEHNLLLIKGSVPG-YKGSIVII 203
>gi|126697087|ref|YP_001091973.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9301]
gi|166233175|sp|A3PF47|RL3_PROM0 RecName: Full=50S ribosomal protein L3
gi|126544130|gb|ABO18372.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9301]
Length = 217
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 80/208 (38%), Positives = 128/208 (61%), Gaps = 3/208 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGM+ +++ +G +PVT++ C++ +T +GY AVQ+G G +K K+
Sbjct: 1 MSIGILGKKLGMSQLFDEKGNSVPVTLIEAGPCRITQLKTTALDGYTAVQIGYGLSKDKH 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+SKP +G K L E+RV++ +G+ + F VGQ VD++G ++G+GF
Sbjct: 61 ISKPEKGHLLKSGEELLKHLKEYRVEETSS-YEIGNQITVKNFEVGQKVDISGKSMGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G KRH F +HG S +HR+ GSTG PGR++ K+MAGR GG ++T K L V+
Sbjct: 120 AGYQKRHGFSRGPMSHG-SKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKQITTKGLLVL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
+DD++ L++VKG VPG S I ++
Sbjct: 179 KIDDQKNLLVVKGSVPGKP-GSIINIKP 205
>gi|282858374|ref|ZP_06267554.1| 50S ribosomal protein L3 [Prevotella bivia JCVIHMP010]
gi|282588822|gb|EFB93947.1| 50S ribosomal protein L3 [Prevotella bivia JCVIHMP010]
Length = 204
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 83/203 (40%), Positives = 121/203 (59%), Gaps = 4/203 (1%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G GEAK K SK
Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYKAVQLGFGEAKEKRTSK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P +G F +PKK L E K D+ +G + F + VDV G + GKGF G
Sbjct: 63 PQQGHFKKAGTTPKKHLAE---FKFDEEYNLGDTITVELFNDTKFVDVVGTSKGKGFQGV 119
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G ++THG R GS G P +VFK +M G+MGG+RVT +NL+V+ V
Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLQVLKV 179
Query: 183 DDKRGLILVKGCVPGAKKNSWIL 205
+ ++LVKG V G ++ I+
Sbjct: 180 IPEHNILLVKGSVAGCNGSTVII 202
>gi|118411190|ref|YP_874584.1| 50S ribosomal protein L3 [Thalassiosira pseudonana]
gi|125987628|sp|A0T0X2|RK3_THAPS RecName: Full=50S ribosomal protein L3, chloroplastic
gi|116739937|gb|ABK20807.1| 50S ribosomal protein L3 [Thalassiosira pseudonana]
Length = 207
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 82/206 (39%), Positives = 118/206 (57%), Gaps = 2/206 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ K+GMT +++ G IPVT+L + C + +T +GY A+QVG G K
Sbjct: 1 MSLGLLGNKIGMTQIFDESGNIIPVTILKVGPCVITQVKTTLNDGYNAIQVGYGNVSTKA 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+++P G N+ P K L EF V D VG + + F GQL++VTG +IGKGF
Sbjct: 61 LTQPQLGHLQKSNIQPLKYLKEFHVS-DPTEFNVGQILNVESFVAGQLINVTGKSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
SG KR+NF THG S +HR+ GS G PGRV KKMAG++G +K L++V
Sbjct: 120 SGLQKRYNFARGPMTHG-SKNHRAPGSIGMGTSPGRVLPGKKMAGQLGNKTANIKKLKIV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
V++ +++VKG VPG N ++
Sbjct: 179 QVNNDENILVVKGAVPGKPGNLLSII 204
>gi|315320564|ref|YP_004072621.1| 50S ribosomal protein L3 [Thalassiosira oceanica CCMP1005]
gi|283569037|gb|ADB27574.1| 50S ribosomal protein L3 [Thalassiosira oceanica CCMP1005]
Length = 207
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 87/206 (42%), Positives = 122/206 (59%), Gaps = 2/206 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ K+GMT +++ G IPVT+L + C V +T +GY A+QVG G K+
Sbjct: 1 MSLGLLGNKIGMTQIFDESGNIIPVTILKVGPCIVTQVKTTLNDGYNAIQVGYGNVSTKS 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+++P G N+ P K L EFRV + D VG V + F GQL++VTG +IGKGF
Sbjct: 61 LTQPQLGHLQKSNIQPLKYLKEFRVNEPAD-FSVGQVLNVDSFIEGQLINVTGKSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
SG KR+NF THG S +HR+ GS G DPGRV KKMAG++G +K L++V
Sbjct: 120 SGLQKRYNFSRGPMTHG-SKNHRAPGSIGMGTDPGRVLPGKKMAGQLGNKMTNIKKLKIV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
V++ +++VKG VPG N +V
Sbjct: 179 QVNNNENILVVKGAVPGKPGNLLSIV 204
>gi|296423844|ref|XP_002841462.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637702|emb|CAZ85653.1| unnamed protein product [Tuber melanosporum]
Length = 306
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 90/215 (41%), Positives = 128/215 (59%), Gaps = 2/215 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+GV+A K GMT +Y GRRI TVL L+ QV +T K+GY AVQVG+G NV
Sbjct: 76 RTGVLAVKKGMTAIYKPSGRRIACTVLQLERVQVTAVKTRQKHGYWAVQVGSGWRNSNNV 135
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
++PM G F++ V+PK+ L EFRV+ + L+ G+ S +F GQ VDV G+GF+
Sbjct: 136 TRPMLGHFATAGVAPKEHLREFRVKDETGLMEPGTALSADFFVEGQYVDVRANCKGRGFA 195
Query: 122 GAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G MKRH F G A+HG S+SHR + + RV K+M GRMGG+RVT + +++
Sbjct: 196 GGMKRHGFSGQPASHGNSLSHRAMGSAGQSQGGGSRVLPGKRMPGRMGGHRVTRPHAQIM 255
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
++ + G IL+ G VPG K + ++D+
Sbjct: 256 EINKELGTILLFGPVPGP-KGCIVAIQDTILGPPP 289
>gi|7674308|sp|Q9ZI50|RL3_AQUPY RecName: Full=50S ribosomal protein L3
gi|4165865|gb|AAD08785.1| ribosomal protein L3 [Aquifex pyrophilus]
Length = 244
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 88/225 (39%), Positives = 128/225 (56%), Gaps = 7/225 (3%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD-KNGYMAVQVGAGEAKVK 59
M G++ K+GMT V +G IPVTV+ VV ++++ K+GY A+QVGA EAK K
Sbjct: 1 MPLGLIGEKVGMTRVLLKDGTAIPVTVIKFPVNYVVQVKSVNTKDGYNALQVGAYEAKEK 60
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+++KP+ G F V ++L+EFRV ++ + F G LVDV G++ G+G
Sbjct: 61 HLTKPLIGHFKKHGVPLLRRLWEFRVDNPEEFKSGQELRVQDVFKPGDLVDVWGISKGRG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G MKR +F G +HG HR+ G+ G R DPGRV+K KKM G G V V+ L V
Sbjct: 121 FAGVMKRWDFAGFPRSHG-HRYHRAVGAIGQRTDPGRVWKGKKMPGHYGAKPVRVQGLFV 179
Query: 180 VSVDDKRGLILVKGC-VPGAKKNSWILV----RDSFKSAVNCKGK 219
V+ + ILVKG +PG K +L+ R +++ + K K
Sbjct: 180 VASLPEENAILVKGSALPGHNKGIVVLLPAVERIAYRKSQKLKQK 224
>gi|291296991|ref|YP_003508389.1| 50S ribosomal protein L3 [Meiothermus ruber DSM 1279]
gi|290471950|gb|ADD29369.1| ribosomal protein L3 [Meiothermus ruber DSM 1279]
Length = 214
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 96/218 (44%), Positives = 129/218 (59%), Gaps = 7/218 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ K+GMT ++ + + +PVTV+ C VV +T++K+GY AVQ+G K + V
Sbjct: 1 MKGILGTKVGMTQIWKGD-KAVPVTVILAGPCPVVQRKTIEKDGYEAVQLGFQSQKPQRV 59
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP +G F+ V P K L E R + G + S F VG++VDVTG + G GF+
Sbjct: 60 NKPAKGHFAKAGVEPVKYLRELRGFNPE-----GDTVTVSIFNVGEVVDVTGTSKGHGFT 114
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MK+ NF G +HG HR GS G R+ PGRVFK KKMAGR G RVT++ LEVV
Sbjct: 115 GVMKKWNFAGGNDSHGAHKIHRHGGSIGNRKTPGRVFKGKKMAGRWGNERVTIQGLEVVD 174
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
V + LILVKG VPGA S ++VR + K GK
Sbjct: 175 VLENENLILVKGSVPGA-NGSLVVVRQTSKVPAVKAGK 211
>gi|157821097|ref|NP_001100322.1| 39S ribosomal protein L3, mitochondrial [Rattus norvegicus]
gi|149018711|gb|EDL77352.1| mitochondrial ribosomal protein L3 (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 348
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 73/216 (33%), Positives = 113/216 (52%), Gaps = 5/216 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD-KNGYMAVQVGAGEAKVK- 59
R G++A KLGM ++ +G++ VT+L + +C V+ + + NG A G+ +
Sbjct: 96 RVGLIALKLGMMPLWTKDGQKHAVTLLQVQDCHVLKYTPKEDHNGKTAALTVGGKTGSRL 155
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+ F+ + + PK+ + F V D+ ++ G+ ++F GQ VDVT TIGKG
Sbjct: 156 YKPNSILEFYRDLGLPPKQTIKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGKG 214
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G MKR F G A+HG + +HR G+ D RV+ KM G+MG TV L+V
Sbjct: 215 FQGVMKRWGFKGQPASHGQTKTHRRPGAIST-GDIARVWPGTKMPGQMGNQNRTVYGLKV 273
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
V+ K +I V G VPG +N + ++DS A
Sbjct: 274 WRVNTKHNIIYVNGSVPG-HRNCLVKIKDSTLPAYK 308
>gi|223936428|ref|ZP_03628340.1| ribosomal protein L3 [bacterium Ellin514]
gi|223894946|gb|EEF61395.1| ribosomal protein L3 [bacterium Ellin514]
Length = 224
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 80/213 (37%), Positives = 120/213 (56%), Gaps = 3/213 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +KLG T VY+ +G PVTV+ +V+ +T D +GY AVQ+G + K + V
Sbjct: 1 MLGLLGKKLGQTRVYDDKGVLWPVTVVLAGPNRVLQCKTQDSDGYNAVQLGFDDQKDQRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+ G N + K++ EFR + G V + F G +D G+T G+GF
Sbjct: 61 TKPLLGHIKKHNGAAVKRIREFRDFTLS--VKPGDVIGATIFAKGDFIDAIGVTKGRGFE 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRHNF G THG HR G+ G R PG V + +M G MG + T +NLE++
Sbjct: 119 GVMKRHNFAGGDMTHGAKGWHRRAGAIGQRLFPGTVMRGMRMPGHMGQVQRTTQNLEIIQ 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V + L+L+KG +PGA K ++++R+S K+
Sbjct: 179 VREADNLLLIKGAIPGA-KGDYVVIRESKKNPK 210
>gi|78780035|ref|YP_398147.1| 50S ribosomal protein L3 [Prochlorococcus marinus str. MIT 9312]
gi|109893536|sp|Q318I4|RL3_PROM9 RecName: Full=50S ribosomal protein L3
gi|78713534|gb|ABB50711.1| LSU ribosomal protein L3P [Prochlorococcus marinus str. MIT 9312]
Length = 217
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 78/208 (37%), Positives = 128/208 (61%), Gaps = 3/208 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +KLGM+ +++ +G +PVT++ C+V +T +GY AVQ+G G +K K+
Sbjct: 1 MSIGILGKKLGMSQLFDDKGNAVPVTLIEAGPCRVTQLKTTTLDGYSAVQIGYGLSKDKH 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP +G K L E+RV++ +G+ + F VGQ VD++G ++G+GF
Sbjct: 61 INKPEKGHLLKSGEELLKHLKEYRVEETTS-YEIGNQITVKNFEVGQKVDISGKSMGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G KRH F +HG S +HR+ GSTG PGR++ K+MAGR GG ++T K L V+
Sbjct: 120 AGYQKRHGFSRGPMSHG-SKNHRAPGSTGAGTTPGRIYPGKRMAGRYGGKQITTKGLLVL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
+DD++ L+++KG VPG S + ++
Sbjct: 179 KIDDQKNLLVIKGSVPGKP-GSIVNIKP 205
>gi|104773542|ref|YP_618522.1| 50S ribosomal protein L3 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116513539|ref|YP_812445.1| 50S ribosomal protein L3 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|122275691|sp|Q04C15|RL3_LACDB RecName: Full=50S ribosomal protein L3
gi|122984010|sp|Q1GBL8|RL3_LACDA RecName: Full=50S ribosomal protein L3
gi|103422623|emb|CAI97231.1| 50S ribosomal protein L3 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116092854|gb|ABJ58007.1| LSU ribosomal protein L3P [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|325125175|gb|ADY84505.1| 50S ribosomal protein L3 [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
gi|325684720|gb|EGD26874.1| 50S ribosomal protein L3 [Lactobacillus delbrueckii subsp. lactis
DSM 20072]
Length = 209
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 80/214 (37%), Positives = 120/214 (56%), Gaps = 5/214 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT ++ +G +PVTV+ V+ +T++ +GY AVQ+G + +
Sbjct: 1 MTKGILGRKVGMTQIFTKDGVLVPVTVIEATPNVVMQVKTVENDGYEAVQLGYQDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G SPK+ + E R + D VGS + F G +V+VTG + G G+
Sbjct: 61 SNKPEKGHADKAKTSPKRFIRELRGVELSD-YEVGSEVTVETFKEGDVVNVTGTSRGHGY 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH+ THG S HR GS G RV K KK+ G MG VT++NL V
Sbjct: 120 QGNIKRHHQSRGPETHG-SRYHRIPGSMGSI--INRVPKGKKLPGHMGVKTVTIENLVVE 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V + ++++KG VPGA KNS I+V+ S K++
Sbjct: 177 KVVADKNVLMIKGNVPGA-KNSLIVVKSSAKASK 209
>gi|307565148|ref|ZP_07627656.1| 50S ribosomal protein L3 [Prevotella amnii CRIS 21A-A]
gi|307346179|gb|EFN91508.1| 50S ribosomal protein L3 [Prevotella amnii CRIS 21A-A]
Length = 204
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 84/203 (41%), Positives = 123/203 (60%), Gaps = 4/203 (1%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G GEAK K SK
Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYKAVQLGFGEAKEKRTSK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P++G F +PKK L EF K D+ +G + F + VDV G + GKGF G
Sbjct: 63 PLQGHFKKAGTTPKKHLAEF---KFDEEYNLGDTITVELFNDTKYVDVVGTSKGKGFQGV 119
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G ++THG R GS G P +VFK +M G+MGG+RVT +NL+V+ V
Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLQVLKV 179
Query: 183 DDKRGLILVKGCVPGAKKNSWIL 205
+ ++LVKG V G ++ I+
Sbjct: 180 IPEHNILLVKGSVAGCNGSTVII 202
>gi|150003387|ref|YP_001298131.1| 50S ribosomal protein L3 [Bacteroides vulgatus ATCC 8482]
gi|212695305|ref|ZP_03303433.1| hypothetical protein BACDOR_04845 [Bacteroides dorei DSM 17855]
gi|237711673|ref|ZP_04542154.1| 50S ribosomal protein L3 [Bacteroides sp. 9_1_42FAA]
gi|237725885|ref|ZP_04556366.1| 50S ribosomal protein L3 [Bacteroides sp. D4]
gi|254881322|ref|ZP_05254032.1| 50S ribosomal protein L3 [Bacteroides sp. 4_3_47FAA]
gi|265753093|ref|ZP_06088662.1| 50S ribosomal protein L3 [Bacteroides sp. 3_1_33FAA]
gi|294777821|ref|ZP_06743265.1| 50S ribosomal protein L3 [Bacteroides vulgatus PC510]
gi|319640324|ref|ZP_07995049.1| 50S ribosomal protein L3 [Bacteroides sp. 3_1_40A]
gi|166233118|sp|A6KYJ5|RL3_BACV8 RecName: Full=50S ribosomal protein L3
gi|149931811|gb|ABR38509.1| 50S ribosomal protein L3 [Bacteroides vulgatus ATCC 8482]
gi|212662215|gb|EEB22789.1| hypothetical protein BACDOR_04845 [Bacteroides dorei DSM 17855]
gi|229435693|gb|EEO45770.1| 50S ribosomal protein L3 [Bacteroides dorei 5_1_36/D4]
gi|229454368|gb|EEO60089.1| 50S ribosomal protein L3 [Bacteroides sp. 9_1_42FAA]
gi|254834115|gb|EET14424.1| 50S ribosomal protein L3 [Bacteroides sp. 4_3_47FAA]
gi|263236279|gb|EEZ21774.1| 50S ribosomal protein L3 [Bacteroides sp. 3_1_33FAA]
gi|294448275|gb|EFG16831.1| 50S ribosomal protein L3 [Bacteroides vulgatus PC510]
gi|317388099|gb|EFV68953.1| 50S ribosomal protein L3 [Bacteroides sp. 3_1_40A]
Length = 205
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 81/204 (39%), Positives = 122/204 (59%), Gaps = 4/204 (1%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT V++ +G+ +P TV+ C V ++++K+GY AVQVG + K K+ +K
Sbjct: 3 GLLGKKIGMTSVFSADGKNVPCTVIEAGPCVVTQIKSVEKDGYAAVQVGFQDKKEKHTTK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P+ G F V+PK+ L EF+ + + L +G + F VDV G + GKGF G
Sbjct: 63 PLMGHFKKAGVTPKRHLAEFKDFETE--LNLGDTITVELFNDAAYVDVVGTSKGKGFQGV 120
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G + THG R GS G P +VFK +M G+MGG+RVT NL+V+ V
Sbjct: 121 VKRHGFGGVGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTHNLQVLKV 180
Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
+ L+L+KG VPG K S +++
Sbjct: 181 IPEHNLLLIKGSVPGC-KGSIVII 203
>gi|301300208|ref|ZP_07206420.1| 50S ribosomal protein L3 [Lactobacillus salivarius ACS-116-V-Col5a]
gi|300852149|gb|EFK79821.1| 50S ribosomal protein L3 [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 195
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 76/200 (38%), Positives = 114/200 (57%), Gaps = 5/200 (2%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
MT V+ G +PVTV+ +D+ V+ +T++ +GY A+Q+G + + +KP +G +
Sbjct: 1 MTQVFTENGELVPVTVVKVDSNVVLQVKTMENDGYEAIQLGFDDLREVLTNKPAKGHAAK 60
Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
N +PK+ + E R + + VG F G VDVTG + G GF G++KR+
Sbjct: 61 ANTTPKRFVREIRDVELGE-YKVGDEVKADIFEAGDFVDVTGTSKGHGFQGSIKRNGQHR 119
Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
HG S HR GS G RV K K + GRMGGNRVT++NLE+V D + G++L+
Sbjct: 120 GPMAHG-SRYHRRPGSMGVI--INRVMKGKLLPGRMGGNRVTIQNLEIVKADTENGVLLI 176
Query: 192 KGCVPGAKKNSWILVRDSFK 211
KG VPGA K S + ++ + K
Sbjct: 177 KGNVPGANK-SLVTIKSTVK 195
>gi|325000492|ref|ZP_08121604.1| ribosomal protein L3 [Pseudonocardia sp. P1]
Length = 225
Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats.
Identities = 89/208 (42%), Positives = 120/208 (57%), Gaps = 1/208 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
+GV+ KLGMT V++ R +PVTV+ + V R+ + +GY AVQ+ G + V+
Sbjct: 15 TGVLGTKLGMTQVFDDNNRVVPVTVVQVGPNVVTQVRSEESDGYTAVQLAYGAIDPRKVN 74
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP G F+ V+P++ L E R D G + F VDV G+T GKGF+G
Sbjct: 75 KPETGHFAKAGVTPRRHLLELR-TADAADYTPGQEITAEAFAEIAEVDVVGVTKGKGFAG 133
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRH F GL A+HG HRS GS G PGRVFK +MAGRMG R T +NL+V V
Sbjct: 134 VMKRHGFAGLGASHGTQRKHRSPGSIGGCATPGRVFKGVRMAGRMGSERQTTQNLKVHRV 193
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSF 210
D +RGL+L+KG VPGA+ ++ +
Sbjct: 194 DAERGLLLIKGAVPGARGGLVVVKTPAK 221
>gi|85057802|ref|YP_456718.1| 50S ribosomal protein L3P [Aster yellows witches'-broom phytoplasma
AYWB]
gi|109893411|sp|Q2NIV4|RL3_AYWBP RecName: Full=50S ribosomal protein L3
gi|84789907|gb|ABC65639.1| LSU ribosomal protein L3P [Aster yellows witches'-broom phytoplasma
AYWB]
Length = 221
Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats.
Identities = 78/221 (35%), Positives = 125/221 (56%), Gaps = 9/221 (4%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT V+N +G +PVT++ + V+ + +D++GY A Q+G + + KN
Sbjct: 1 MAQGILGKKIGMTQVFNEQGELVPVTIVDVAANVVLQQKNVDQDGYQATQIGFCDKREKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDD----LLPVGSVFSPSYFTVGQLVDVTGMTI 116
SKPM G F +PK+ + E D + L VG++ + F VG LVDVTG +
Sbjct: 61 TSKPMLGHFKKATTAPKRFIKEINFSSDVNSNLANLVVGALITNDLFQVGDLVDVTGTSK 120
Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
GKGF+G++KRHN +HG S HR GS G + + K MG VT++N
Sbjct: 121 GKGFAGSIKRHNQSRGPESHG-SRYHRRPGSMGPIKGKLKGKKLPG---HMGYETVTIQN 176
Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
L ++S+D ++ L L+KG VPG K +++++ + K +
Sbjct: 177 LAILSIDTEKNLFLIKGNVPGPNKG-FVMIKSAVKKLTKEQ 216
>gi|296228094|ref|XP_002759662.1| PREDICTED: 39S ribosomal protein L3, mitochondrial-like isoform 1
[Callithrix jacchus]
Length = 376
Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats.
Identities = 80/216 (37%), Positives = 117/216 (54%), Gaps = 5/216 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAVQVGAGE-AKVK 59
R G+VA KLGM ++ +G+R VT+L + +C V+ + + + +G MA G+
Sbjct: 124 RVGLVAVKLGMMPLWTKDGQRHVVTLLQVRDCHVLKYISKENHDGKMAALSVGGKTVSRF 183
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+ S + F+ + + PK+K+ FR+ D+ L G+ ++F GQ VDVT TIGKG
Sbjct: 184 HKSTQILEFYRELGLPPKQKVKIFRIT-DNAALKPGTPLYAAHFRPGQYVDVTAKTIGKG 242
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G MKR F G ATHG + +HR G+ D RV+ K+ G+MG TV L+V
Sbjct: 243 FQGVMKRWGFKGQPATHGQTKTHRRPGAIST-GDVARVWPGTKLPGQMGNIDRTVHGLKV 301
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
++ K +I V G VPG KN + VRDS A
Sbjct: 302 WRINTKHNIIYVNGSVPG-HKNCLVKVRDSKLPAYK 336
>gi|42526279|ref|NP_971377.1| 50S ribosomal protein L3 [Treponema denticola ATCC 35405]
gi|81831476|sp|Q73PN1|RL3_TREDE RecName: Full=50S ribosomal protein L3
gi|41816391|gb|AAS11258.1| ribosomal protein L3 [Treponema denticola ATCC 35405]
gi|325473223|gb|EGC76418.1| 50S ribosomal protein L3 [Treponema denticola F0402]
Length = 208
Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats.
Identities = 85/213 (39%), Positives = 123/213 (57%), Gaps = 5/213 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT ++N G +PVTV+ ++ VV + +K GY +V +G GE K K+
Sbjct: 1 MIGLIGKKIGMTQIFNEVGHLMPVTVIQVEPNTVVALKDKEKFGYSSVVLGLGELKEKHT 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SKP G FS K K+ VG F +D+T ++ GKGF
Sbjct: 61 SKPYAGQFSGDIKPLKLLKEFRDFDKEVA---VGDKLGVEAFEKVSYLDITAISKGKGFQ 117
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR +GG RA+HG S HR GSTG PGR FKN M GRMG ++VTV+NL++V
Sbjct: 118 GVMKRWGYGGGRASHG-SKFHREAGSTGHCTTPGRSFKNTTMPGRMGFDKVTVQNLQIVK 176
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
+D + G+I+V+G VPG KK++ + ++ + K A
Sbjct: 177 IDPELGVIMVRGSVPG-KKDATVFLKSAVKRAK 208
>gi|320335523|ref|YP_004172234.1| 50S ribosomal protein L3 [Deinococcus maricopensis DSM 21211]
gi|319756812|gb|ADV68569.1| 50S ribosomal protein L3 [Deinococcus maricopensis DSM 21211]
Length = 206
Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats.
Identities = 90/213 (42%), Positives = 119/213 (55%), Gaps = 7/213 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ K+GMT V+ + + IPVTV+ C VV +T +GY AVQVG K +
Sbjct: 1 MKGILGTKVGMTQVWKDD-KVIPVTVVLAGPCPVVQRKTTATDGYEAVQVGFMPKNEKRI 59
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
++P+ G VS + L EFR + P G + F G+ +D TG + GKG
Sbjct: 60 NRPLMGHLKKAGVSGVRYLREFR-----NFTPEGDTITVDIFGAGEKIDATGTSKGKGTQ 114
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR NF G A+HG HR GS G R+ PGRV+K K+MAGRMG RVTV+NLEVV
Sbjct: 115 GVMKRWNFKGGPASHGSKKWHRRPGSIGQRKTPGRVYKGKRMAGRMGNERVTVQNLEVVE 174
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V LILVKG +PGA +++R + K
Sbjct: 175 VRAGENLILVKGAIPGA-NGGLVVLRQAVKGVK 206
>gi|224370691|ref|YP_002604855.1| 50S ribosomal protein L3 [Desulfobacterium autotrophicum HRM2]
gi|259647408|sp|C0Q9X3|RL3_DESAH RecName: Full=50S ribosomal protein L3
gi|223693408|gb|ACN16691.1| RplC [Desulfobacterium autotrophicum HRM2]
Length = 207
Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats.
Identities = 76/210 (36%), Positives = 115/210 (54%), Gaps = 3/210 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ +G +PVTV+ C V + +GY A+Q+G E +
Sbjct: 1 MFKGMLGKKIGMTSIFAADGTLVPVTVVRFGPCVVTQVKAEKTDGYNALQLGFDERALAK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP G FS + + EFRV+ D+ VG F +G V+V+G + G+GF
Sbjct: 61 CNKPKVGHFSKSGSTGFNVVREFRVENTDE-FEVGQNIGLDGFAIGDKVNVSGTSKGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KRH F THG +HR GS GC P RV K ++M G MG +R TVKNLE++
Sbjct: 120 AGTIKRHGFSRGPETHGCR-NHRKPGSIGCSAWPARVVKGRRMPGHMGVDRKTVKNLEII 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
+ L+++KG VPG K + +R +
Sbjct: 179 DIRPDENLVMIKGPVPG-WKTGLLEIRKAV 207
>gi|149072009|ref|YP_001293580.1| 50S ribosomal protein L3 [Rhodomonas salina]
gi|212288242|sp|A6MW01|RK3_RHDSA RecName: Full=50S ribosomal protein L3, chloroplastic
gi|134302960|gb|ABO70764.1| 50S ribosomal protein L3 [Rhodomonas salina]
Length = 208
Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats.
Identities = 82/201 (40%), Positives = 119/201 (59%), Gaps = 2/201 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ KLGMT +++ G IPVTV+ C + +T + + Y A+Q+G E K +
Sbjct: 1 MIPGILGTKLGMTQIFDESGLAIPVTVIKAGPCILTQIKTQESDSYQAIQIGFSEVKESS 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP+ G K L E+RV+ + L V + F VG+ V V+G TIGKGF
Sbjct: 61 LNKPLLGHLKKSQAPALKHLKEYRVKSVEG-LEVAQKITLDSFEVGKTVSVSGKTIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G ++R++F THG S +HR GS G PG+V K KKMAGR+GG + T+KNLE+V
Sbjct: 120 AGTVRRYSFTRGPMTHG-SKNHREPGSIGQGSTPGKVHKGKKMAGRLGGKQSTIKNLEIV 178
Query: 181 SVDDKRGLILVKGCVPGAKKN 201
V+ +++VKG VPG K N
Sbjct: 179 HVNTDNNILVVKGAVPGKKGN 199
>gi|303328094|ref|ZP_07358533.1| 50S ribosomal protein L3 [Desulfovibrio sp. 3_1_syn3]
gi|302861920|gb|EFL84855.1| 50S ribosomal protein L3 [Desulfovibrio sp. 3_1_syn3]
Length = 209
Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats.
Identities = 82/205 (40%), Positives = 114/205 (55%), Gaps = 2/205 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ RKLGMT ++ +G + VTV+ C V +T++K+GY A+Q+ EAK K+V K
Sbjct: 6 GILGRKLGMTRIFAGDGAAVAVTVIEAGPCPVTQVKTVEKDGYNALQIALTEAKEKHVGK 65
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
MRG F+ + E R+ G + F G +V VTG ++GKG+ G
Sbjct: 66 AMRGHFAKAGTGLFRHTREIRLS-GAPEQQPGQQLTVDIFAAGDVVKVTGKSMGKGYQGR 124
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
M+R NF G + THG HR++GS G PG VFK +KMAG G VT L +V V
Sbjct: 125 MRRWNFAGSKDTHGCEKVHRNNGSVGNNTFPGHVFKGRKMAGHWGNETVTEMGLLIVGVR 184
Query: 184 DKRGLILVKGCVPGAKKNSWILVRD 208
+ +ILVKG VPG KN +L+R
Sbjct: 185 PEDNVILVKGSVPGP-KNGLVLIRK 208
>gi|239905858|ref|YP_002952597.1| 50S ribosomal protein L3 [Desulfovibrio magneticus RS-1]
gi|259647413|sp|C4XLX3|RL3_DESMR RecName: Full=50S ribosomal protein L3
gi|239795722|dbj|BAH74711.1| 50S ribosomal protein L3 [Desulfovibrio magneticus RS-1]
Length = 210
Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats.
Identities = 87/205 (42%), Positives = 118/205 (57%), Gaps = 2/205 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ RKLGMT V+ +G IPVTV+ C V + L+K+GY A+Q+G E + V+K
Sbjct: 6 GILGRKLGMTRVFGDDGSIIPVTVIQAGPCPVTQVKNLEKDGYNAMQIGFDEIPERKVNK 65
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P +G + L E R+ + F G++V VTG +IGKGF+G
Sbjct: 66 PEKGHLDKAARGYFRVLKEIRLDGPVPFEQGMD-VTVDIFAPGEIVKVTGTSIGKGFAGV 124
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
MKR NF GL+ THG +HRS GS G +PG+V K KKMAG MG VTV ++ VV V
Sbjct: 125 MKRWNFAGLKKTHGTEKAHRSGGSIGNNTEPGKVMKGKKMAGHMGARTVTVPSITVVDVR 184
Query: 184 DKRGLILVKGCVPGAKKNSWILVRD 208
+ LILVKG +PG +N ++VR
Sbjct: 185 PEMNLILVKGQIPGP-RNGVVVVRK 208
>gi|225873078|ref|YP_002754537.1| ribosomal protein L3 [Acidobacterium capsulatum ATCC 51196]
gi|225791691|gb|ACO31781.1| ribosomal protein L3 [Acidobacterium capsulatum ATCC 51196]
Length = 246
Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats.
Identities = 74/225 (32%), Positives = 121/225 (53%), Gaps = 12/225 (5%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVKNV 61
+G++ +K+GMT V++ +G P+TVL C + +T K+GY A Q+G E K V
Sbjct: 4 TGILGKKIGMTQVFDEKGEVHPITVLQAGPCVITQLKTAAKDGYDAAQIGLVEFVKDSKV 63
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQ--------KDDDLLPVGSVFSPSYFTVGQLVDVTG 113
+KPM+G F+ +V+P + + E V+ + + + G F + VD+ G
Sbjct: 64 TKPMKGHFAKSDVAPVRMIKEVDVETAAPSAEGESNGAVKAGDRVLVDIFADEKYVDIIG 123
Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
+ G+GF+G ++RH FGG +HG + GS G P RVF ++M G MG +RVT
Sbjct: 124 TSKGRGFAGVVRRHGFGGGPKSHG--HMFQVQGSIGASSFPSRVFPGQRMPGHMGTDRVT 181
Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
V+NL + +D LI+V+G VPG + ++L+ + +G
Sbjct: 182 VRNLRIRGIDLDENLIMVEGAVPGPRDG-YVLISKAKAPPRERRG 225
>gi|332182016|gb|AEE17704.1| 50S ribosomal protein L3 [Treponema brennaborense DSM 12168]
Length = 206
Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats.
Identities = 88/211 (41%), Positives = 123/211 (58%), Gaps = 5/211 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++A K+GMT V++ +G PVTV+ +D VV +T + GY AV +G G+ K +
Sbjct: 1 MKGLIATKVGMTQVFDEDGNLTPVTVIRVDPNVVVACKTKETFGYDAVVLGLGDLKNSQI 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SKP G F ++PK+ L EFR ++ + VG F VDVT + GKGF
Sbjct: 61 SKPYAGQFPE-GITPKRHLKEFRDFSNE--VAVGDQIGVELFENTNYVDVTATSKGKGFQ 117
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR F G RATHG S HR GSTG PG FKN KM G MG R+TV+NL+V+
Sbjct: 118 GVMKRWGFHGGRATHG-SKFHREAGSTGQCTSPGHSFKNIKMPGHMGCERITVQNLKVIK 176
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + +++V+G VPG K+ ++++ + K
Sbjct: 177 VDPELKVVMVRGSVPG-NKDCTLIIKSAVKK 206
>gi|313677120|ref|YP_004055116.1| LSU ribosomal protein l3p [Marivirga tractuosa DSM 4126]
gi|312943818|gb|ADR23008.1| LSU ribosomal protein L3P [Marivirga tractuosa DSM 4126]
Length = 212
Score = 188 bits (478), Expect = 5e-46, Method: Composition-based stats.
Identities = 83/211 (39%), Positives = 118/211 (55%), Gaps = 7/211 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT +Y ++GR + TV+ C V + + +GY A+Q+G E K KN
Sbjct: 1 MSGIIGKKIGMTSIYGVDGRNVACTVIEAGPCVVTQVKKEETDGYSAIQLGYEERKEKNT 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-----SYFTVGQLVDVTGMTI 116
K ++G F + +PKKKL EFR + D F G VDV G +
Sbjct: 61 PKALQGHFKNAQTTPKKKLAEFREYEGYDTFVDKFTLGQTVTIGDVFEEGDYVDVAGSSK 120
Query: 117 GKGFSGAMKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKGF G +KRH F G +ATHG R+ GS G P RVF +MAGR GG+RV
Sbjct: 121 GKGFQGVVKRHGFGGVGQATHGQHNRQRAPGSIGGASYPARVFPGMRMAGRTGGDRVKNT 180
Query: 176 NLEVVSVDDKRGLILVKGCVPGAKKNSWILV 206
NL V+ + ++ L+LV G +PGA KNS++++
Sbjct: 181 NLRVLKLIPEKNLLLVSGSIPGA-KNSFVII 210
>gi|330752348|emb|CBL87301.1| ribosomal protein L3 [uncultured Sphingobacteria bacterium]
Length = 205
Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats.
Identities = 75/203 (36%), Positives = 117/203 (57%), Gaps = 4/203 (1%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
V+ +K+GMT ++ + G++ P TV+ + + ++ + +GY +VQ+ + E K K+ +KP
Sbjct: 4 VIGKKIGMTAIFTVNGKKEPCTVVSCEPNVITQIKSEESDGYSSVQIASIEKKEKSSNKP 63
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
G F+ +PK+ + E R + VG F F GQ VDV G + GKGF G +
Sbjct: 64 EMGHFAKAKTTPKRVVMEIRDYTGEG--TVGDSFGVEIFEEGQFVDVVGTSKGKGFQGVV 121
Query: 125 KRHNFG-GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
KRH F ATHG R+ GS G P RVFK +MAGRMGG RV ++NL ++ VD
Sbjct: 122 KRHGFRGVGEATHGQHNRLRAPGSLGAGSTPSRVFKGTRMAGRMGGERVKMQNLRILKVD 181
Query: 184 DKRGLILVKGCVPGAKKNSWILV 206
+ ++++ G VPG K S++++
Sbjct: 182 TENNVLVISGAVPG-HKGSYVII 203
>gi|297621720|ref|YP_003709857.1| 50S ribosomal protein L3 [Waddlia chondrophila WSU 86-1044]
gi|297377021|gb|ADI38851.1| 50S ribosomal protein L3 [Waddlia chondrophila WSU 86-1044]
Length = 220
Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats.
Identities = 81/220 (36%), Positives = 123/220 (55%), Gaps = 9/220 (4%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK--- 57
M ++ +K GMT +++ +G + TV+ ++ V +T +GY AVQVG +
Sbjct: 1 MALKLMGKKRGMTHLFDEKGNVVVCTVIEMEPNVVTQIKTQGTDGYDAVQVGFDKVTTKD 60
Query: 58 ----VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTG 113
+ V KP+RG F V P++ + E R+ D VG F + F + +D T
Sbjct: 61 PRTMDQRVKKPLRGHFKKAGVEPRRHMLESRLS-DVTGYQVGQEFDVTAFNEVKFIDATA 119
Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
++IGKGF GAMK H F G+ A+HG +HRS GSTG R PGR F K A +MG +VT
Sbjct: 120 ISIGKGFQGAMKLHGFSGMPASHGAKKNHRSLGSTGGRSTPGRCFPGGKRASQMGNRQVT 179
Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
++NLE+V + + +++VKG +PG KN + +R + K A
Sbjct: 180 IQNLEIVQIIPEENVVVVKGSIPGP-KNGVVTMRQAVKKA 218
>gi|145606142|ref|XP_365809.2| hypothetical protein MGG_02511 [Magnaporthe oryzae 70-15]
gi|145013870|gb|EDJ98511.1| hypothetical protein MGG_02511 [Magnaporthe oryzae 70-15]
Length = 396
Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats.
Identities = 96/218 (44%), Positives = 130/218 (59%), Gaps = 2/218 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+GVVA K GMT +++ G RIP TVL LD+ QV++++T + GY AVQVGA +
Sbjct: 106 RAGVVAIKKGMTALFSRRGTRIPCTVLQLDSVQVLLNKTRENAGYFAVQVGAVPKRPSTA 165
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
P G+F + V PK+ + EFRV+ + LLPVG P +F VGQ VDV G + G GF
Sbjct: 166 LAPQLGYFEAKGVEPKQHVAEFRVRNEQGLLPVGVQLQPDWFHVGQWVDVRGTSRGMGFE 225
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP-GRVFKNKKMAGRMGGNRVTVKNLEVV 180
G MKRH F G +HG S++HR+ GS G Q RV KKM GRMGG T +NL V+
Sbjct: 226 GGMKRHGFSGQNKSHGNSLNHRTGGSVGPSQGSGSRVHPGKKMPGRMGGQSATAQNLSVL 285
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
VD+ G+++VKG V G K + ++D+ +
Sbjct: 286 KVDNDLGIVVVKGAVAGP-KGGMVKIQDAVLKPPPPEK 322
>gi|161506873|ref|YP_001576827.1| 50S ribosomal protein L3 [Lactobacillus helveticus DPC 4571]
gi|260102355|ref|ZP_05752592.1| 50S ribosomal protein L3 [Lactobacillus helveticus DSM 20075]
gi|172048367|sp|A8YXK5|RL3_LACH4 RecName: Full=50S ribosomal protein L3
gi|160347862|gb|ABX26536.1| 50S ribosomal protein L3 [Lactobacillus helveticus DPC 4571]
gi|260083799|gb|EEW67919.1| 50S ribosomal protein L3 [Lactobacillus helveticus DSM 20075]
gi|323465824|gb|ADX69511.1| 50S ribosomal protein L3 [Lactobacillus helveticus H10]
gi|328463364|gb|EGF35037.1| 50S ribosomal protein L3 [Lactobacillus helveticus MTCC 5463]
Length = 212
Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats.
Identities = 77/217 (35%), Positives = 119/217 (54%), Gaps = 5/217 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT ++ +G +PVTV+ V+ +T++ +GY AVQ+G + +
Sbjct: 1 MTKGILGRKVGMTQIFTKDGVLVPVTVVEATPNVVMQVKTVESDGYEAVQLGYQDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G SPK+ + E R + D VGS + F G +V+VTG + G G+
Sbjct: 61 SNKPEKGHADKAKTSPKRFIREIRGVELKD-YEVGSEVTVDTFKEGDVVNVTGTSRGHGY 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR THG S HR GS G RV K K++ G MG +VT++NL +
Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSI--INRVPKGKRLPGHMGMKKVTIENLVIE 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
V + ++++KG VPGA KNS I+V+ + K+ K
Sbjct: 177 KVVADKNVLMIKGNVPGA-KNSLIVVKTASKAVKADK 212
>gi|328872429|gb|EGG20796.1| ribosomal protein L3 [Dictyostelium fasciculatum]
Length = 333
Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats.
Identities = 106/208 (50%), Positives = 138/208 (66%), Gaps = 3/208 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G + +KLGMT VY ++ IPVTV+ L + QVV + +G AVQVGAGE K+KN+
Sbjct: 64 RVGAIGKKLGMTTVY-VDHVAIPVTVIELPDNQVVQVKRKVNDGSNAVQVGAGEIKLKNI 122
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
++G F+ +V PK+ + EF+V K + VG+ +F GQLV V G + GKGF+
Sbjct: 123 GGTLKGHFAKADVPPKRVVMEFKVTKG-GFMDVGTSIDARHFVPGQLVKVQGTSTGKGFA 181
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR NF GL ATHGVS +HRS GSTGCRQ PGRVFK KKM GR+GG TV NL+VV
Sbjct: 182 GGMKRWNFSGLLATHGVSKTHRSIGSTGCRQTPGRVFKGKKMPGRLGGQSSTVNNLQVVK 241
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209
++ + +I+VKG VPG K ++ V DS
Sbjct: 242 INSELNVIMVKGAVPG-KNGGYLRVTDS 268
>gi|94266253|ref|ZP_01289960.1| Ribosomal protein L3 [delta proteobacterium MLMS-1]
gi|93453179|gb|EAT03643.1| Ribosomal protein L3 [delta proteobacterium MLMS-1]
Length = 209
Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats.
Identities = 72/205 (35%), Positives = 111/205 (54%), Gaps = 1/205 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT V+ G +PVTV+ C V+ +T+ K GY A+QVG G ++K
Sbjct: 6 GLLGKKVGMTRVFTETGAAVPVTVIQAGPCVVLQKKTVAKEGYSAIQVGFGPRSEARLNK 65
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
G + + + EFRV + + +G LVD+ G + G+GF G
Sbjct: 66 AEAGHVKAAGKGGFEFVREFRVSDPEAYQLGQEISVGDLLNIGDLVDIRGKSKGRGFQGV 125
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
+KR+ F G RATHG S+ HR+ G+ GC P RV K KKM G+MG +T KN +V +
Sbjct: 126 VKRYGFKGGRATHG-SMFHRAPGAIGCSAWPSRVIKGKKMPGQMGDKYITKKNCTIVDIR 184
Query: 184 DKRGLILVKGCVPGAKKNSWILVRD 208
+ +I++KG VPG+ + + +
Sbjct: 185 PESNVIVLKGGVPGSSQGVLQIFKK 209
>gi|213403778|ref|XP_002172661.1| 50S ribosomal protein L3 [Schizosaccharomyces japonicus yFS275]
gi|212000708|gb|EEB06368.1| 50S ribosomal protein L3 [Schizosaccharomyces japonicus yFS275]
Length = 264
Score = 188 bits (477), Expect = 6e-46, Method: Composition-based stats.
Identities = 95/210 (45%), Positives = 126/210 (60%), Gaps = 2/210 (0%)
Query: 2 RSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
R G + K GMT V++ +++PVTVL D QVV +T ++GY AVQ+GAG N
Sbjct: 47 RPGAILFKKGMTSVWDESTHQQVPVTVLQFDRVQVVGLKTEKRDGYSAVQMGAGLRLPHN 106
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
VS+ ++G FS+ V PK+ + EF+V+ D L VG+V +P YF VGQ VDV +T GKG
Sbjct: 107 VSRALQGHFSANGVYPKRYVKEFQVKDDSCLPKVGTVLTPEYFQVGQHVDVKALTKGKGT 166
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR G +HG S SHRS G TG + P RV KKM+G MG TV+N+ V
Sbjct: 167 AGVMKRWGLSGGNDSHGASKSHRSAGGTGQAKIPARVLPGKKMSGHMGHQFRTVQNMLVW 226
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
+V + ILVKG VPG + + V DS
Sbjct: 227 AVHPEHDCILVKGAVPGPVEG-VVYVSDSI 255
>gi|269101057|ref|YP_003289205.1| 50S ribosomal protein L3 [Ectocarpus siliculosus]
gi|266631565|emb|CAV31236.1| Chloroplast 50S ribosomal protein L3 [Ectocarpus siliculosus]
gi|270118695|emb|CAT18766.1| Chloroplast 50S ribosomal protein L3 [Ectocarpus siliculosus]
Length = 207
Score = 188 bits (477), Expect = 6e-46, Method: Composition-based stats.
Identities = 81/206 (39%), Positives = 116/206 (56%), Gaps = 2/206 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+ K+GMT +++ G +PVTV+ + C + +T NGY A+Q+G +
Sbjct: 1 MSIGIFGNKIGMTQIFDKNGLALPVTVVSVGPCFITQLKTEKTNGYDAIQIGYSKGHTSK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SK G +SP L E+RV D +G + + F VGQ V+VTG +IGKGF
Sbjct: 61 FSKAELGHLEKNGLSPLYHLCEYRV-NDLKNYSLGQILTVDNFQVGQFVNVTGKSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
SG KRH F THG S +HR+ GS G PGRVF K MAG++G ++TV LE++
Sbjct: 120 SGNQKRHKFKRGPMTHG-SKNHRAPGSIGPGTTPGRVFPGKLMAGQLGAKKITVSKLEIL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
+D K+ L+++KG VPG N ++
Sbjct: 179 GIDSKQNLLILKGSVPGKPGNLLNII 204
>gi|300728443|ref|ZP_07061805.1| ribosomal protein L3 [Prevotella bryantii B14]
gi|299774362|gb|EFI70992.1| ribosomal protein L3 [Prevotella bryantii B14]
Length = 204
Score = 188 bits (477), Expect = 6e-46, Method: Composition-based stats.
Identities = 91/204 (44%), Positives = 124/204 (60%), Gaps = 5/204 (2%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ RK+GMT V++ +G+ +P TV+ C V +T++K+GY AVQ+G GEAK KN SK
Sbjct: 3 GLIGRKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYKAVQLGFGEAKEKNTSK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P+ G F +PKK L EF K D+ L +G + F Q VDV G + GKGF G
Sbjct: 63 PLMGTFKKAGTTPKKHLAEF---KFDEELNLGDTLTVEIFNDAQFVDVVGTSKGKGFQGV 119
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G ++THG R GS G P +VFK +M G+MGG+RVT +NL+V+ V
Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLKVLKV 179
Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
+ LILVKG V G S +L+
Sbjct: 180 IPEHNLILVKGSVAGC-NGSTVLI 202
>gi|291320506|ref|YP_003515770.1| 50S ribosomal protein L3 [Mycoplasma agalactiae]
gi|290752841|emb|CBH40816.1| 50S ribosomal protein L3 [Mycoplasma agalactiae]
Length = 267
Score = 188 bits (477), Expect = 6e-46, Method: Composition-based stats.
Identities = 81/213 (38%), Positives = 122/213 (57%), Gaps = 6/213 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT +Y G+RIPVTV+ + V T++KNGY+A Q+ E K K V
Sbjct: 1 MKGILGRKVGMTQIYTELGQRIPVTVIEVKPNVVSKVLTVEKNGYVATQLATVEKKAKRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
++P+ G F +PK+ + E R + +G + S F+ G+LVD+TG++ GKGF+
Sbjct: 61 NRPLAGQFIQAKTTPKQYIKEIRGMEG---YELGQEVNASIFSAGELVDITGISKGKGFA 117
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP--GRVFKNKKMAGRMGGNRVTVKNLEV 179
G +KR N +HG + TG D RV K M G +G + TV+NLE+
Sbjct: 118 GTIKRWNQHIGPKSHGGGGGSQPVRQTGSLGDISGNRVVKGMTMPGHLGSEKTTVQNLEI 177
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD L+LVKG +PGAKK S+++++ + K
Sbjct: 178 VKVDTVNNLLLVKGSIPGAKK-SFVIIKQAVKG 209
>gi|281422251|ref|ZP_06253250.1| 50S ribosomal protein L3 [Prevotella copri DSM 18205]
gi|281403756|gb|EFB34436.1| 50S ribosomal protein L3 [Prevotella copri DSM 18205]
Length = 204
Score = 188 bits (477), Expect = 6e-46, Method: Composition-based stats.
Identities = 83/204 (40%), Positives = 122/204 (59%), Gaps = 5/204 (2%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT V++ +G+ IP TV+ + C V +T++K+GY A Q+G EAK K S+
Sbjct: 3 GLIGKKIGMTSVFSADGKNIPCTVIEVGPCVVTQVKTVEKDGYKAYQLGFEEAKEKRTSQ 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
PM G F +PKK L EF K D+ +G + F + VDV G + GKGF G
Sbjct: 63 PMMGIFKKAGTTPKKHLAEF---KFDEEYNLGDTITVEIFNDCKFVDVIGTSKGKGFQGV 119
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G ++THG R GS G P +VFK +M G+MGG+RVT +NL+V+ +
Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLQVLKI 179
Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
++ L++VKG G K S +L+
Sbjct: 180 IPEQNLLIVKGSFAGC-KGSTVLI 202
>gi|302908346|ref|XP_003049847.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256730783|gb|EEU44134.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 333
Score = 188 bits (477), Expect = 6e-46, Method: Composition-based stats.
Identities = 97/218 (44%), Positives = 136/218 (62%), Gaps = 3/218 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
+R+GV+A K GMT V+ + R+P TVL LD QV+ ++T +KNGY AVQ+G+G +N
Sbjct: 76 LRTGVLAIKKGMTSVFVGK-VRVPCTVLQLDQVQVIANKTREKNGYWAVQIGSGSRDGRN 134
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+ PM G++ + ++PK L EF V+ LLPVG P +F GQ VDV + G GF
Sbjct: 135 VTSPMLGYYEAKGIAPKADLAEFMVRDQSGLLPVGVQILPDWFKKGQYVDVKSRSRGMGF 194
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ-DPGRVFKNKKMAGRMGGNRVTVKNLEV 179
+G MKRH F G A+HG S +HR+ G+TG Q RV KKM GRMG VTV+NL+V
Sbjct: 195 AGGMKRHGFSGQEASHGNSKNHRTIGTTGPSQGGGSRVLPGKKMPGRMGNEFVTVQNLKV 254
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
+ VD++ G++LV G + G K + ++DS K +
Sbjct: 255 MMVDNELGVVLVSGPIAGP-KGRVVRLQDSKKRKAPPQ 291
>gi|238855068|ref|ZP_04645396.1| 50S ribosomal protein L3 [Lactobacillus jensenii 269-3]
gi|256852036|ref|ZP_05557423.1| 50S ribosomal protein L3 [Lactobacillus jensenii 27-2-CHN]
gi|260661395|ref|ZP_05862308.1| 50S ribosomal protein L3 [Lactobacillus jensenii 115-3-CHN]
gi|260664853|ref|ZP_05865704.1| 50S ribosomal protein L3 [Lactobacillus jensenii SJ-7A-US]
gi|282933636|ref|ZP_06339001.1| 50S ribosomal protein L3 [Lactobacillus jensenii 208-1]
gi|282934051|ref|ZP_06339333.1| 50S ribosomal protein L3 [Lactobacillus jensenii 208-1]
gi|297205089|ref|ZP_06922485.1| 50S ribosomal protein L3 [Lactobacillus jensenii JV-V16]
gi|313472595|ref|ZP_07813084.1| 50S ribosomal protein L3 [Lactobacillus jensenii 1153]
gi|238832312|gb|EEQ24621.1| 50S ribosomal protein L3 [Lactobacillus jensenii 269-3]
gi|256615448|gb|EEU20638.1| 50S ribosomal protein L3 [Lactobacillus jensenii 27-2-CHN]
gi|260547850|gb|EEX23827.1| 50S ribosomal protein L3 [Lactobacillus jensenii 115-3-CHN]
gi|260561336|gb|EEX27309.1| 50S ribosomal protein L3 [Lactobacillus jensenii SJ-7A-US]
gi|281301883|gb|EFA94145.1| 50S ribosomal protein L3 [Lactobacillus jensenii 208-1]
gi|281302241|gb|EFA94478.1| 50S ribosomal protein L3 [Lactobacillus jensenii 208-1]
gi|297149667|gb|EFH29964.1| 50S ribosomal protein L3 [Lactobacillus jensenii JV-V16]
gi|313448952|gb|EFR61270.1| 50S ribosomal protein L3 [Lactobacillus jensenii 1153]
Length = 209
Score = 187 bits (476), Expect = 6e-46, Method: Composition-based stats.
Identities = 81/212 (38%), Positives = 118/212 (55%), Gaps = 5/212 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT ++ +G +PVTV+ V+ +T++ +GY AVQ+G + +
Sbjct: 1 MTKGILGRKVGMTQIFTDKGVLVPVTVIEATPNVVMQVKTVESDGYEAVQLGYQDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G SPK+ + E R + D VGS + F G +VDVTG T G G+
Sbjct: 61 SNKPEKGHADKAKTSPKRFIREIRGVELKD-YEVGSEVTVDTFKEGDVVDVTGTTRGHGY 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH THG S HR GS G RV K KK+ G MG VT++NL +
Sbjct: 120 QGNIKRHGQSRGPETHG-SRYHRIPGSMGSI--INRVPKGKKLPGHMGVKTVTIQNLVIE 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V + ++LVKG VPGA K+S I+V+ + K+
Sbjct: 177 KVVADKNVLLVKGNVPGA-KDSLIVVKSATKA 207
>gi|227879243|ref|ZP_03997113.1| 50S ribosomal protein L3 [Lactobacillus crispatus JV-V01]
gi|227894520|ref|ZP_04012325.1| 50S ribosomal protein L3 [Lactobacillus ultunensis DSM 16047]
gi|256844429|ref|ZP_05549915.1| 50S ribosomal protein L3 [Lactobacillus crispatus 125-2-CHN]
gi|256849183|ref|ZP_05554616.1| 50S ribosomal protein L3 [Lactobacillus crispatus MV-1A-US]
gi|262047199|ref|ZP_06020157.1| 50S ribosomal protein L3 [Lactobacillus crispatus MV-3A-US]
gi|293380377|ref|ZP_06626448.1| 50S ribosomal protein L3 [Lactobacillus crispatus 214-1]
gi|295692160|ref|YP_003600770.1| 50S ribosomal protein l3 [Lactobacillus crispatus ST1]
gi|315037530|ref|YP_004031098.1| 50S ribosomal protein L3 [Lactobacillus amylovorus GRL 1112]
gi|325956003|ref|YP_004286613.1| 50S ribosomal protein L3 [Lactobacillus acidophilus 30SC]
gi|227861137|gb|EEJ68786.1| 50S ribosomal protein L3 [Lactobacillus crispatus JV-V01]
gi|227863679|gb|EEJ71100.1| 50S ribosomal protein L3 [Lactobacillus ultunensis DSM 16047]
gi|256613507|gb|EEU18710.1| 50S ribosomal protein L3 [Lactobacillus crispatus 125-2-CHN]
gi|256713959|gb|EEU28947.1| 50S ribosomal protein L3 [Lactobacillus crispatus MV-1A-US]
gi|260572444|gb|EEX29006.1| 50S ribosomal protein L3 [Lactobacillus crispatus MV-3A-US]
gi|290923060|gb|EFD99991.1| 50S ribosomal protein L3 [Lactobacillus crispatus 214-1]
gi|295030266|emb|CBL49745.1| 50S ribosomal protein L3 [Lactobacillus crispatus ST1]
gi|312275663|gb|ADQ58303.1| 50S ribosomal protein L3 [Lactobacillus amylovorus GRL 1112]
gi|325332568|gb|ADZ06476.1| 50S ribosomal protein L3 [Lactobacillus acidophilus 30SC]
gi|327182826|gb|AEA31273.1| 50S ribosomal protein L3 [Lactobacillus amylovorus GRL 1118]
Length = 212
Score = 187 bits (476), Expect = 7e-46, Method: Composition-based stats.
Identities = 77/217 (35%), Positives = 119/217 (54%), Gaps = 5/217 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT ++ +G +PVTV+ V+ +T++ +GY AVQ+G + +
Sbjct: 1 MTKGILGRKVGMTQIFTKDGVLVPVTVVEATPNVVMQVKTVESDGYEAVQLGYQDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G SPK+ + E R + D VGS + F G +V+VTG + G G+
Sbjct: 61 SNKPEKGHADKAKTSPKRFIREIRGVELKD-YEVGSEVTVDTFKEGDVVNVTGTSRGHGY 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR THG S HR GS G RV K K++ G MG +VT++NL +
Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSI--INRVPKGKRLPGHMGVKKVTIENLVIE 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
V + ++++KG VPGA KNS I+V+ + K+ K
Sbjct: 177 KVVADKNVLMIKGNVPGA-KNSLIVVKTASKAVKADK 212
>gi|26454475|dbj|BAC44803.1| ribosomal protein L3 [Mycoplasma penetrans HF-2]
Length = 326
Score = 187 bits (476), Expect = 7e-46, Method: Composition-based stats.
Identities = 80/213 (37%), Positives = 115/213 (53%), Gaps = 7/213 (3%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ RK+GM + +GRRIPVT++ + V+ ++T +KNGY+A +VG + + K ++KP
Sbjct: 20 ILGRKIGMIQSFLEDGRRIPVTIIQAEPNVVLENKTQEKNGYVATKVGFQQIEEKKLNKP 79
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+G+F + K EFR VG F G VD +T GKGF+GA+
Sbjct: 80 QKGYFKKIKTDAFKHTKEFRNVSG---YNVGDKILVDIFNSGDKVDAQAITKGKGFTGAI 136
Query: 125 KRHNFGGLRATHGVSISHRSHGST---GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
KR NF HG HR GS RV K +KM+G G VT+ NL VVS
Sbjct: 137 KRWNFKVGPLGHGAGYPHRYQGSISFGRGGSQGQRVPKGQKMSGHYGHELVTISNLTVVS 196
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
++ ++ LILVKG VPG NS +L++ + KS
Sbjct: 197 IELEKNLILVKGSVPGPV-NSLVLLKTTVKSKK 228
>gi|148377809|ref|YP_001256685.1| 50S ribosomal protein L3 [Mycoplasma agalactiae PG2]
gi|226730538|sp|A5IYY6|RL3_MYCAP RecName: Full=50S ribosomal protein L3
gi|148291855|emb|CAL59245.1| 50S ribosomal protein L3 [Mycoplasma agalactiae PG2]
Length = 267
Score = 187 bits (476), Expect = 7e-46, Method: Composition-based stats.
Identities = 81/213 (38%), Positives = 121/213 (56%), Gaps = 6/213 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT +Y G+RIPVTV+ + V T++KNGY A Q+ E K K V
Sbjct: 1 MKGILGRKVGMTQIYTELGQRIPVTVVEVKPNVVSKVLTVEKNGYFATQLATVEKKAKRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
++P+ G F +PK+ + E R + +G + S F+ G+LVD+TG++ GKGF+
Sbjct: 61 NRPLAGQFIQAKTTPKQYIKEIRGMEG---YELGQEVNASIFSAGELVDITGISKGKGFA 117
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP--GRVFKNKKMAGRMGGNRVTVKNLEV 179
G +KR N +HG + TG D RV K M G +G + TV+NLE+
Sbjct: 118 GTIKRWNQHIGPKSHGGGGGSQPVRQTGSLGDISGNRVVKGMTMPGHLGSEKTTVQNLEI 177
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD L+LVKG +PGAKK S+++++ + K
Sbjct: 178 VKVDTVNNLLLVKGSIPGAKK-SFVIIKQAVKG 209
>gi|161611308|ref|YP_007411.2| 50S ribosomal protein L3 [Candidatus Protochlamydia amoebophila
UWE25]
Length = 221
Score = 187 bits (476), Expect = 7e-46, Method: Composition-based stats.
Identities = 77/222 (34%), Positives = 114/222 (51%), Gaps = 10/222 (4%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK--- 57
M ++ +K GM +++ +G I TV+ + + +T + +GY A+Q+G +
Sbjct: 1 MALTMMGKKRGMIQLFDEKGNAIVCTVIQAEPNVITQIKTKETDGYTALQLGFEKVTGKT 60
Query: 58 ----VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTG 113
KP G F V ++ L E R+ ++ +G S F + VD T
Sbjct: 61 QHTIEARTGKPRLGHFKKAGVESRRFLVESRLDSTEE-YTLGQEISVDTFNGIEFVDATA 119
Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
++ GKG+ G MKRHNF G A+HG S HR GSTG R PGR K AG+MG RVT
Sbjct: 120 ISKGKGYQGVMKRHNFAGGPASHG-SGHHRHAGSTGMRSTPGRGLPGGKKAGQMGNERVT 178
Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
V+NL +V VD + +I+VKG VPG +N + + + K A
Sbjct: 179 VQNLRIVKVDSENHVIVVKGQVPGP-RNGLVYITQAKKLAKK 219
>gi|168282378|ref|ZP_02690045.1| ribosomal protein L3 [Ureaplasma parvum serovar 14 str. ATCC 33697]
gi|182675690|gb|EDT87595.1| ribosomal protein L3 [Ureaplasma parvum serovar 14 str. ATCC 33697]
Length = 233
Score = 187 bits (476), Expect = 7e-46, Method: Composition-based stats.
Identities = 80/214 (37%), Positives = 118/214 (55%), Gaps = 9/214 (4%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+S ++ K+GMT V+ G+ + TV++++ +V+ +T +K+GY A+Q+G K K
Sbjct: 1 MKS-LLGTKVGMTQVFTETGKAVAATVIYVEPNKVLAVKTNEKDGYSAIQIGYETVKEKA 59
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP+ G F N PK+ + EFR D + VG+ + S F GQLV+ T G GF
Sbjct: 60 LNKPLLGQFKKANSDPKRHIKEFR----DAVAEVGAELTVSEFEPGQLVNAQAYTKGHGF 115
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGST---GCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
+G++KRHNF HG HR GS RVFK K+ G G VT KNL
Sbjct: 116 TGSIKRHNFSMGPMGHGAGYPHRYVGSIAKGRGGSQAQRVFKGTKLPGHYGHELVTTKNL 175
Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
V+ V LIL+KG +PG K S +L++ + K
Sbjct: 176 LVLDVKANENLILIKGAIPGP-KGSIVLLKSAKK 208
>gi|58336630|ref|YP_193215.1| 50S ribosomal protein L3 [Lactobacillus acidophilus NCFM]
gi|227903187|ref|ZP_04020992.1| 50S ribosomal protein L3 [Lactobacillus acidophilus ATCC 4796]
gi|81311536|sp|Q5FM90|RL3_LACAC RecName: Full=50S ribosomal protein L3
gi|58253947|gb|AAV42184.1| 50S ribosomal protein L3 [Lactobacillus acidophilus NCFM]
gi|227868992|gb|EEJ76413.1| 50S ribosomal protein L3 [Lactobacillus acidophilus ATCC 4796]
Length = 212
Score = 187 bits (476), Expect = 7e-46, Method: Composition-based stats.
Identities = 77/217 (35%), Positives = 119/217 (54%), Gaps = 5/217 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT ++ +G +PVTV+ V+ +T++ +GY AVQ+G + +
Sbjct: 1 MTKGILGRKVGMTQIFTKDGILVPVTVVEATPNVVMQVKTVESDGYEAVQLGYQDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G SPK+ + E R + D VGS + F G +V+VTG + G G+
Sbjct: 61 SNKPEKGHADKAKTSPKRFIREIRGVELKD-YEVGSEVTVDTFKEGDVVNVTGTSRGHGY 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR THG S HR GS G RV K K++ G MG +VT++NL +
Sbjct: 120 QGNIKRWGQSRGPETHG-SRYHRIPGSMGSI--INRVPKGKRLPGHMGVKKVTIENLVIE 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
V + ++++KG VPGA KNS I+V+ + K+ K
Sbjct: 177 KVVADKNVLMIKGNVPGA-KNSLIVVKTASKAVKADK 212
>gi|94734480|emb|CAK11309.1| mitochondrial ribosomal protein L3 [Danio rerio]
Length = 345
Score = 187 bits (475), Expect = 8e-46, Method: Composition-based stats.
Identities = 82/220 (37%), Positives = 114/220 (51%), Gaps = 4/220 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNG--YMAVQVGAGEAKVK 59
R G+VA KLGM V++ G R VT+L + +C VV H + + A+ VG
Sbjct: 96 RVGLVAIKLGMMPVWSKSGERHVVTMLQVKDCHVVKHLSKEDYNGHTSALVVGGKNVSPF 155
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+ F + + PK+KL F V D+ ++ G+ ++F GQ VDVT TIGKG
Sbjct: 156 HRPVGYLEIFQNAGIPPKQKLTTFCVT-DNAIIKPGTPLYAAHFRPGQYVDVTAKTIGKG 214
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G MKR F G A+HG + +HR G+ G DP +VFK KM GRMG T L++
Sbjct: 215 FQGVMKRWGFKGQPASHGQTKTHRRPGALGPGGDPAKVFKGTKMPGRMGNVYNTNFGLKI 274
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
V+ K ++ V G VPG +N + VRD+ K K
Sbjct: 275 WRVNTKYNILYVNGSVPG-HRNCLVKVRDTVLPTRLEKNK 313
>gi|291411673|ref|XP_002722112.1| PREDICTED: 39S ribosomal protein L3, mitochondrial-like
[Oryctolagus cuniculus]
Length = 348
Score = 187 bits (475), Expect = 8e-46, Method: Composition-based stats.
Identities = 76/216 (35%), Positives = 113/216 (52%), Gaps = 5/216 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNG--YMAVQVGAGEAKVK 59
R G++A KLGM ++ +G R VT+L + +C V+ + + + + A+ VG
Sbjct: 96 RVGLIALKLGMMPLWTKDGHRHVVTLLQVQDCHVLKYTSKENHNGKMAALTVGGKTVSRF 155
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
S + F+ + + PK+K+ F V D+ ++ G+ ++F GQ VDVT TIGKG
Sbjct: 156 RKSTSVLEFYQELGLPPKQKVKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTARTIGKG 214
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G MKR F G ATHG + +HR G+ D RV+ KM G+MG T L+V
Sbjct: 215 FQGVMKRWGFKGQPATHGQTKTHRRPGAIST-GDVARVWPGTKMPGQMGNIDRTAYGLKV 273
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
++ K +I V G VPG KN + V+DS A
Sbjct: 274 WRINTKHNIIYVNGSVPG-HKNCLVKVKDSKLPAYK 308
>gi|168308532|ref|ZP_02691207.1| ribosomal protein L3 [Ureaplasma parvum serovar 1 str. ATCC 27813]
gi|171902869|gb|EDT49158.1| ribosomal protein L3 [Ureaplasma parvum serovar 1 str. ATCC 27813]
Length = 233
Score = 187 bits (475), Expect = 9e-46, Method: Composition-based stats.
Identities = 79/214 (36%), Positives = 117/214 (54%), Gaps = 9/214 (4%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+S ++ K+GMT V+ G+ + TV++++ +V+ +T +K+GY A+Q+G K K
Sbjct: 1 MKS-LLGTKVGMTQVFTETGKAVAATVIYVEPNKVLAVKTNEKDGYSAIQIGYETVKEKA 59
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP+ G F N PK+ + EFR + VG+ + S F GQLV+ T G GF
Sbjct: 60 LNKPLLGQFKKANSDPKRHIKEFRDVFAE----VGAELTVSEFEPGQLVNAQAYTKGHGF 115
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGST---GCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
+G++KRHNF HG HR GS RVFK K+ G G VT KNL
Sbjct: 116 TGSIKRHNFSMGPMGHGAGYPHRYVGSIAKGRGGSQAQRVFKGTKLPGHYGHELVTTKNL 175
Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
V+ V LIL+KG +PG K S +L++ + K
Sbjct: 176 LVLDVKANENLILIKGAIPGP-KGSIVLLKSAKK 208
>gi|294155415|ref|YP_003559799.1| 50S ribosomal protein L3 [Mycoplasma crocodyli MP145]
gi|291600390|gb|ADE19886.1| 50S ribosomal protein L3 [Mycoplasma crocodyli MP145]
Length = 269
Score = 187 bits (475), Expect = 9e-46, Method: Composition-based stats.
Identities = 82/216 (37%), Positives = 117/216 (54%), Gaps = 6/216 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT VY G+R+ VTV+ + V + +KNGY A+Q+ + K
Sbjct: 1 MKGILGRKVGMTQVYTETGQRVAVTVIEVQPNVVTKVLSQEKNGYTAIQLAVFDKKASRS 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ +PK+ + E R D +G V + F G+LVDVTG + GKGF+
Sbjct: 61 NKPETGHFAKAKTTPKRYVKEVR---DMSGYELGQVLQANVFKAGELVDVTGTSKGKGFA 117
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP--GRVFKNKKMAGRMGGNRVTVKNLEV 179
G +KRHN +HG + TG D +V K M G++G R TV+NLEV
Sbjct: 118 GTIKRHNQHIGPKSHGGGGGSQPVRQTGSLGDIAGNKVVKGMTMPGQLGNERTTVQNLEV 177
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
V VD L+L+KG +PG KK S+++VR K N
Sbjct: 178 VKVDLVNNLLLIKGSIPGPKK-SFVMVRQGVKGLAN 212
>gi|187251822|ref|YP_001876304.1| 50S ribosomal protein L3 [Elusimicrobium minutum Pei191]
gi|186971982|gb|ACC98967.1| Ribosomal protein L3 [Elusimicrobium minutum Pei191]
Length = 259
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 80/216 (37%), Positives = 116/216 (53%), Gaps = 1/216 (0%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
V+ K+GMT +++ +G V+V+ C+VV RT +K+GY AV +G GE K K ++KP
Sbjct: 32 VLGEKMGMTQLFDEKGNLHAVSVVKAGPCKVVRVRTQEKDGYTAVCLGFGEVKEKALNKP 91
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
GFF +P + + E RV V F G VDV G G+GF+GAM
Sbjct: 92 ELGFFKKTTQAPVRHMKEHRVSDVTGFEVGQVVSLDKIFKPGDYVDVQGKIKGRGFAGAM 151
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KRH F G A+HG S R+ G R+ G+V ++MAG G TV +EV+ VD
Sbjct: 152 KRHGFAGQPASHGASDRERAPGGLASRRSLGKVLSGQRMAGHYGNTTQTVAKIEVIKVDS 211
Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
+ LI +KG VPGA K + + V ++ K+ + +
Sbjct: 212 ENNLIFLKGSVPGA-KGTIVSVLETSKTRKHIVAPI 246
>gi|328949277|ref|YP_004366614.1| 50S ribosomal protein L3 [Treponema succinifaciens DSM 2489]
gi|328449601|gb|AEB15317.1| 50S ribosomal protein L3 [Treponema succinifaciens DSM 2489]
Length = 206
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 88/211 (41%), Positives = 125/211 (59%), Gaps = 5/211 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++A+K+GMT V++ G PVTV+ ++ VV +T +K GY AV +G + K +
Sbjct: 1 MKGLIAKKVGMTQVFDENGNLTPVTVIRVEPNTVVATKTQEKCGYEAVVLGLEDLKPHKI 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP F N++PK+ L EFR + + + VG F + +DVT + GKGF
Sbjct: 61 TKPYAKQFPE-NITPKRHLKEFRDFEGE--VKVGDQIGVELFEKVRFIDVTATSKGKGFQ 117
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR F G RATHG S HR G TGC PG KN KM GRMG +RVTV+NL+VV
Sbjct: 118 GVMKRWGFHGGRATHG-SKFHREAGGTGCCTTPGHCLKNVKMPGRMGFDRVTVQNLKVVK 176
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + +++V+G VPG +N ++V+ + K
Sbjct: 177 VDPELNVLMVRGAVPG-VRNCTLIVKAAVKK 206
>gi|301774558|ref|XP_002922699.1| PREDICTED: 39S ribosomal protein L3, mitochondrial-like [Ailuropoda
melanoleuca]
Length = 348
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 76/216 (35%), Positives = 115/216 (53%), Gaps = 5/216 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNG--YMAVQVGAGEAKVK 59
R G++A KLGM ++ +GR+ VT+L + +C V+ + + + A+ VG A
Sbjct: 96 RVGLIALKLGMMPLWTKDGRKHVVTLLQVQDCHVLKYTPKENHNGKMAALTVGGKTASRF 155
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+ S + F+ + + PK+K+ F V D+ ++ G+ ++F GQ VDVT TIGKG
Sbjct: 156 HKSTSVLEFYQELGLPPKQKVKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGKG 214
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G MKR F G ATHG + +HR G+ D R++ KM G+MG T L+V
Sbjct: 215 FQGVMKRWGFKGQPATHGQTKTHRRPGAIST-GDVARIWPGTKMPGQMGNRDRTAYGLKV 273
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
++ K +I V G VPG KN + +RDS A
Sbjct: 274 WRINTKHNVIYVNGSVPG-HKNCLVKIRDSNLPAYK 308
>gi|320108396|ref|YP_004183986.1| 50S ribosomal protein L3 [Terriglobus saanensis SP1PR4]
gi|319926917|gb|ADV83992.1| 50S ribosomal protein L3 [Terriglobus saanensis SP1PR4]
Length = 242
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 72/220 (32%), Positives = 117/220 (53%), Gaps = 7/220 (3%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVKNV 61
+G++ RK+GMT V++ G P+TV+ C + +T+ K+GY A Q+G E K +
Sbjct: 4 TGILGRKIGMTQVFDERGDVHPITVIKAGPCVITQLKTMQKDGYEAAQIGLVEFVKASKI 63
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQ---KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
+K M G F+ +V P K + E + + ++ + G F + VDV G + G+
Sbjct: 64 NKAMTGHFAKSSVPPVKIIREVPFEASAEGEEAVKSGDRVLIDIFENAKFVDVIGTSKGR 123
Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
GF+G ++RH FGG +HG + GS G P RVF ++M G MG ++TV+NL
Sbjct: 124 GFAGVIRRHGFGGGPKSHG--HMFQVQGSIGASSFPSRVFPGQRMPGHMGAAQITVRNLR 181
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+ +D + LI+V+G VPG + +LV + +G
Sbjct: 182 IRGIDLEDNLIMVEGAVPGPRDG-VVLVSRAKAPPRERRG 220
>gi|193216762|ref|YP_002000004.1| 50S ribosomal protein L3 [Mycoplasma arthritidis 158L3-1]
gi|226730537|sp|B3PMP8|RL3_MYCA5 RecName: Full=50S ribosomal protein L3
gi|193002085|gb|ACF07300.1| ribosomal protein L3 [Mycoplasma arthritidis 158L3-1]
Length = 272
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 68/219 (31%), Positives = 115/219 (52%), Gaps = 6/219 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT ++ EG IPVT++ + V T++K+GY A Q+ + K +
Sbjct: 1 MKGILGRKVGMTQLFTNEGILIPVTIVEVKPNVVTKVLTVEKDGYSATQLATEDKKASQI 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+P F N +PK+ + E R +G S F G++VDVT ++ GKGF+
Sbjct: 61 RRPEINKFKQANTTPKRFVKEIRNMTG---YSLGDTIDASLFQAGEIVDVTAISKGKGFA 117
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP--GRVFKNKKMAGRMGGNRVTVKNLEV 179
G +KR N +HG + TG D RV+K M G +G +VT++NLE+
Sbjct: 118 GTIKRWNQHIGPKSHGGGGGSQPLRQTGSIGDISGNRVWKGMTMPGHLGSEQVTIQNLEI 177
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
V D ++++KG +PGA K + ++++ + K++ +
Sbjct: 178 VKEDPANNMLVIKGSIPGA-KGALVVIKKAIKTSHKKEA 215
>gi|149247048|ref|XP_001527949.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146447903|gb|EDK42291.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 278
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 91/210 (43%), Positives = 126/210 (60%), Gaps = 1/210 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G+ K GM + +G + TV+ +D+C+V+ +T D++GY A +G +
Sbjct: 59 RPGLFGIKRGMITWFTPKGEQFAATVIEIDSCEVIGQKTRDQHGYDANIIGTIDKLKNYP 118
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+ F VSPK K EFRV ++L+PVG+ YF+VGQ+VD+ G+T GKGF+
Sbjct: 119 REAELKMFEEAGVSPKHKFGEFRVLDTNNLIPVGTELKADYFSVGQMVDIKGITKGKGFA 178
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR NF G ATHGVS +HR+ GS G Q+PGRV KKM GRMG + T N EV+
Sbjct: 179 GVMKRWNFAGNNATHGVSKAHRTPGSMGGNQNPGRVLPGKKMPGRMGCDNRTEFNKEVLH 238
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
VD GL++VKG +PG K S + + D+ K
Sbjct: 239 VDGDAGLLIVKGNIPGPNK-SIVRISDALK 267
>gi|254431244|ref|ZP_05044947.1| ribosomal protein L3 [Cyanobium sp. PCC 7001]
gi|197625697|gb|EDY38256.1| ribosomal protein L3 [Cyanobium sp. PCC 7001]
Length = 204
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 78/205 (38%), Positives = 117/205 (57%), Gaps = 3/205 (1%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
M+ ++ G+ IPVTV+ C++ ++ +GY AVQ+G G+ + K V+KP +G +
Sbjct: 1 MSQFFDEAGKSIPVTVIEAGPCRITQIKSTGTDGYNAVQLGFGDIREKLVNKPAQGHLAK 60
Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
+ L E+RV D L G + + F GQ VDV+G T+G+GF+G KRH F
Sbjct: 61 SGEELLRHLKEYRVDSLDGLELGG-AVTVAAFEPGQKVDVSGDTMGRGFAGYQKRHGFSR 119
Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
THG S +HR GSTG PGRV+ K+MAGR GG + T + L ++ VD +R L++V
Sbjct: 120 GPMTHG-SKNHREPGSTGAGTTPGRVYPGKRMAGRYGGKQTTTRGLVILKVDTERNLLVV 178
Query: 192 KGCVPGAKKNSWILVRDSFKSAVNC 216
KG VPG + + +R + + N
Sbjct: 179 KGSVPGKP-GALLNIRPANRVGANA 202
>gi|256371215|ref|YP_003109039.1| ribosomal protein L3 [Acidimicrobium ferrooxidans DSM 10331]
gi|256007799|gb|ACU53366.1| ribosomal protein L3 [Acidimicrobium ferrooxidans DSM 10331]
Length = 213
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 85/213 (39%), Positives = 117/213 (54%), Gaps = 2/213 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R V K+GMT V+ R +PVTV+ + VV +T +++GY AVQV G K + +
Sbjct: 3 RKTFVGEKVGMTQVWTEGDRAVPVTVIKVVPTWVVRTKTPERDGYEAVQVAVGRVKPQRL 62
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
S+P+ G F + V ++ E R+ G G +DV G++ G GFS
Sbjct: 63 SRPVAGQFEARGVEAGARIMELRLD-GASSFEPGDQIGIEGIEPGMRLDVVGVSKGHGFS 121
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRHNF G A HG HR+ GS G P RVFK +MAG+ G RVT+ NLEVV
Sbjct: 122 GGMKRHNFRGQGAAHGNHKKHRAPGSIGACATPARVFKGTRMAGQYGTERVTIHNLEVVR 181
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
+ +R L+LVKG +PG + + ++VRDS K
Sbjct: 182 AEPERQLVLVKGSIPGP-RGAIVVVRDSVKGRK 213
>gi|332170559|gb|AEE19814.1| 50S ribosomal protein L3 [Krokinobacter diaphorus 4H-3-7-5]
Length = 203
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 75/208 (36%), Positives = 119/208 (57%), Gaps = 6/208 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ +K+GMT +++ G+ IP TV+ C + RT + +GY A+Q+G +AK N
Sbjct: 1 MSGLIGKKVGMTSIFDENGKNIPCTVIEAGPCVITQVRTKEADGYEALQLGFDDAKKANK 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+ + K Q + +G + +F G+ VDV+G + GKGF
Sbjct: 61 AAAGHAKKAGTVAKRKV----VEFQGFEGEFKLGDAITVDHFAEGEFVDVSGTSKGKGFQ 116
Query: 122 GAMKRHNFG-GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH F +ATHG R+ GS G P RVFK +MAGRMGG+++ V+NL+V+
Sbjct: 117 GVVKRHGFRGVGQATHGQHNRLRAPGSIGAASYPARVFKGMRMAGRMGGDKIKVQNLKVL 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
V ++ L++VKGCVPG KN++++++
Sbjct: 177 KVVAEKNLLVVKGCVPG-HKNAYVIIQK 203
>gi|157363442|ref|YP_001470209.1| 50S ribosomal protein L3 [Thermotoga lettingae TMO]
gi|166990942|sp|A8F4R1|RL3_THELT RecName: Full=50S ribosomal protein L3
gi|157314046|gb|ABV33145.1| ribosomal protein L3 [Thermotoga lettingae TMO]
Length = 210
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 81/206 (39%), Positives = 119/206 (57%), Gaps = 7/206 (3%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ RK+GMT ++ + IPVTV+ C VV + +GY A+QVG K V+KP
Sbjct: 4 ILGRKIGMTRLFIND-VSIPVTVVRAGPCYVVQKKNPQIDGYCAIQVGFEHLK--RVNKP 60
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
+ G F V P + L E R++ +++L +G F G+ VD+TG T G+GFSG
Sbjct: 61 LEGHFKKAQVKPLRLLREIRLEDENELDSYEIGQEIKLDIFQPGEKVDITGWTKGRGFSG 120
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KR F G HG S HR GS G +P ++FK KKM GR G RVT+ NLEV+ +
Sbjct: 121 GIKRWGFSGGPRAHG-SKFHRELGSLGQHTEPAKIFKGKKMPGRYGNERVTIHNLEVIKI 179
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRD 208
D + L+++KG VPGA + S ++++
Sbjct: 180 DLENNLLVLKGSVPGA-RGSLVIIKS 204
>gi|281351379|gb|EFB26963.1| hypothetical protein PANDA_011694 [Ailuropoda melanoleuca]
Length = 317
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 76/216 (35%), Positives = 115/216 (53%), Gaps = 5/216 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNG--YMAVQVGAGEAKVK 59
R G++A KLGM ++ +GR+ VT+L + +C V+ + + + A+ VG A
Sbjct: 66 RVGLIALKLGMMPLWTKDGRKHVVTLLQVQDCHVLKYTPKENHNGKMAALTVGGKTASRF 125
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+ S + F+ + + PK+K+ F V D+ ++ G+ ++F GQ VDVT TIGKG
Sbjct: 126 HKSTSVLEFYQELGLPPKQKVKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGKG 184
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G MKR F G ATHG + +HR G+ D R++ KM G+MG T L+V
Sbjct: 185 FQGVMKRWGFKGQPATHGQTKTHRRPGAIST-GDVARIWPGTKMPGQMGNRDRTAYGLKV 243
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
++ K +I V G VPG KN + +RDS A
Sbjct: 244 WRINTKHNVIYVNGSVPG-HKNCLVKIRDSNLPAYK 278
>gi|251772490|gb|EES53056.1| Ribosomal protein L3 [Leptospirillum ferrodiazotrophum]
Length = 204
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 88/204 (43%), Positives = 122/204 (59%), Gaps = 3/204 (1%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ K+GMT +Y G+ IPVTV+ + C+V+ +T +K+ Y AVQ+G G K +++KP
Sbjct: 4 IIGEKIGMTQIYLPNGKSIPVTVVKVGPCEVIQVKTKEKDRYSAVQLGYGIVKPVSLNKP 63
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+RG F + + V D P GS++ +F G+LV TGMT GKGF+G M
Sbjct: 64 LRGHFQKYSQN--TYRTIREVVILGDPPPSGSIYGADFFKPGELVSATGMTKGKGFAGVM 121
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KRH+F G ATHG S+ HR GS G P RV KNKK+ G MG +VT+KNLEVV V
Sbjct: 122 KRHHFRGGDATHG-SMFHREPGSIGSSAYPSRVLKNKKLPGHMGHKKVTIKNLEVVEVKA 180
Query: 185 KRGLILVKGCVPGAKKNSWILVRD 208
+ L+L+KG VPG + +D
Sbjct: 181 EANLVLLKGAVPGHPGTILVFKKD 204
>gi|212704583|ref|ZP_03312711.1| hypothetical protein DESPIG_02645 [Desulfovibrio piger ATCC 29098]
gi|212671982|gb|EEB32465.1| hypothetical protein DESPIG_02645 [Desulfovibrio piger ATCC 29098]
Length = 209
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 82/205 (40%), Positives = 116/205 (56%), Gaps = 2/205 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ RKLGMT ++ +G +PVTV+ C V +T++ +GY A+Q+ E K K+VSK
Sbjct: 6 GILGRKLGMTRIFAGDGAAVPVTVIQAGPCPVTQVKTVETDGYNALQIALTEDKEKHVSK 65
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
M+G F+ ++L E R++ + G + F G +V VT +IGKG+ G
Sbjct: 66 AMKGHFAKAGTGLYRELREIRLEN-APEMEPGQELTVEMFATGDVVKVTAKSIGKGYQGR 124
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
M+R NF G + THG HR++GS G PG VFK +KMAG G VT L +V V
Sbjct: 125 MRRWNFAGSKDTHGCEKVHRNNGSIGNNTFPGHVFKGRKMAGHWGNETVTEMGLVIVDVR 184
Query: 184 DKRGLILVKGCVPGAKKNSWILVRD 208
+ILVKG VPG KN +L+R
Sbjct: 185 PADNVILVKGSVPGP-KNGLVLIRK 208
>gi|203284388|ref|YP_002222128.1| 50S ribosomal protein L3 [Borrelia duttonii Ly]
gi|203287922|ref|YP_002222937.1| 50S ribosomal protein L3 [Borrelia recurrentis A1]
gi|226725137|sp|B5RM36|RL3_BORDL RecName: Full=50S ribosomal protein L3
gi|226725139|sp|B5RPI2|RL3_BORRA RecName: Full=50S ribosomal protein L3
gi|201083831|gb|ACH93422.1| 50S ribosomal protein L3 [Borrelia duttonii Ly]
gi|201085142|gb|ACH94716.1| 50S ribosomal protein L3 [Borrelia recurrentis A1]
Length = 209
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 85/209 (40%), Positives = 128/209 (61%), Gaps = 6/209 (2%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT V+ G +PVTV+ + V+ +T++++GY A+ +G+ + K VS+
Sbjct: 3 GLIGKKVGMTQVFQSNGIVVPVTVIEFEPNYVIGKKTMERDGYDALIMGSVDLKGSKVSR 62
Query: 64 PMRGFFSSVNV-SPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
P++G + + PK+ + EF+ K G F + VD+TG T GKGF G
Sbjct: 63 PIKGQYKKLENIEPKRYVIEFKGLKG---YDAGDEVGLDAFREIKYVDITGTTKGKGFQG 119
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
AMKRHNF G ++HG S HR G TG P R FK KMAGRMGG + T++NLE+V +
Sbjct: 120 AMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGEQQTIQNLEIVFI 178
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
D+++ ILVKG VPG K S+++V+ + K
Sbjct: 179 DEEKRAILVKGAVPG-VKGSFVIVKKAKK 206
>gi|331703716|ref|YP_004400403.1| 50S ribosomal protein L3 [Mycoplasma mycoides subsp. capri LC str.
95010]
gi|328802271|emb|CBW54425.1| 50S ribosomal protein L3 [Mycoplasma mycoides subsp. capri LC str.
95010]
Length = 223
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 79/217 (36%), Positives = 128/217 (58%), Gaps = 6/217 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+ MT V+ G+ +PVTV+ + V+ +T+D +GY+AVQ+G + +V V
Sbjct: 1 MKGILGRKVEMTQVFTNSGQLVPVTVVEVLPNTVLQVKTIDSDGYVAVQLGTTDKRVNLV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F N +PK+ + E R + +L + F G+ VDVTG++ GKGF+
Sbjct: 61 NKPELGHFKKANSNPKRFVKEIRNMQGYEL--GQVINVSDIFVSGEYVDVTGISKGKGFA 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRHN+ HG S HR GS G R+FK+KKM G MG + T++NLE+++
Sbjct: 119 GGIKRHNYARGPMAHG-SGYHRGIGSMGAI--INRIFKSKKMPGHMGNAKRTIQNLEIIA 175
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+D ++L+KG +PG KNS++ ++ + K + +
Sbjct: 176 IDQPNNIMLIKGSIPGP-KNSFVQIKQNIKGMSSKQA 211
>gi|268316408|ref|YP_003290127.1| 50S ribosomal protein L3 [Rhodothermus marinus DSM 4252]
gi|262333942|gb|ACY47739.1| ribosomal protein L3 [Rhodothermus marinus DSM 4252]
Length = 210
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 90/211 (42%), Positives = 117/211 (55%), Gaps = 4/211 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD-KNGYMAVQVGAGEAKVKN 60
SG++ RK+GMT V++ G IP T++ + VV +T + K+GY AVQ+G GE K K
Sbjct: 1 MSGMLGRKIGMTQVFDQAGNCIPCTIIQAEPNAVVQVKTAEGKDGYEAVQLGYGERKPKR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++ M G F VSPK+ L EF+ D P V F G+L+DV G+T G+GF
Sbjct: 61 TTRAMLGHFEKAGVSPKQVLREFKNFVLDVK-PGDEVRVEQLFREGELIDVVGITKGRGF 119
Query: 121 SGAMKRHNFG-GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
G +KRH FG THG R+ GS G P VFK +MAGRMG RV VKNL V
Sbjct: 120 QGVVKRHGFGGVGARTHGQHNRERAPGSIGASSFPSHVFKGMRMAGRMGNQRVKVKNLRV 179
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
V + + LILVKG VPG N + +
Sbjct: 180 VRIFPEHNLILVKGAVPGPV-NGIVELYKKV 209
>gi|317476356|ref|ZP_07935605.1| 50S ribosomal protein L3 [Bacteroides eggerthii 1_2_48FAA]
gi|316907382|gb|EFV29087.1| 50S ribosomal protein L3 [Bacteroides eggerthii 1_2_48FAA]
Length = 195
Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats.
Identities = 80/196 (40%), Positives = 117/196 (59%), Gaps = 4/196 (2%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
MT V++ EG+ +P TV+ C V +T++K+GY AVQ+G + K K+ +KP+ G F
Sbjct: 1 MTSVFSAEGKNVPCTVIEAGPCVVTQVKTVEKDGYQAVQLGFQDKKEKHTTKPLMGHFKK 60
Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF-G 130
V+PKK L EF ++ + L +G + F VDV G + GKGF G +KRH F G
Sbjct: 61 AGVTPKKHLAEF--KEFETELNLGDTVTVELFEGADFVDVVGTSKGKGFQGVVKRHGFGG 118
Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190
+ THG R GS G P +VFK +M G++GG+RVTV+NL+V+ V + L+L
Sbjct: 119 VGQTTHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKVIAEHNLLL 178
Query: 191 VKGCVPGAKKNSWILV 206
+KG VPG K S +++
Sbjct: 179 IKGSVPGC-KGSIVII 193
>gi|269215705|ref|ZP_06159559.1| 50S ribosomal protein L3 [Slackia exigua ATCC 700122]
gi|269131192|gb|EEZ62267.1| 50S ribosomal protein L3 [Slackia exigua ATCC 700122]
Length = 206
Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats.
Identities = 89/209 (42%), Positives = 119/209 (56%), Gaps = 3/209 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M + + +KLGMT ++N + +PVTV+ + V +T + +GY AVQ+G G K K
Sbjct: 1 MINAIYGKKLGMTQLFNENDQVVPVTVIVAEPNTVCQVKTKETDGYEAVQLGFGAIKAKK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+KPM G F+ V P + L E RV+ D VG + F + V VTG +IGKGF
Sbjct: 61 VNKPMGGHFAKSGVEPTRHLREVRVESAAD-YKVGDTQTVEAFADVKKVHVTGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH F G + HR+ GS G P RVFK +M G MG + VT KNLEVV
Sbjct: 120 QGVIKRHGFAGGPGG-HGAHFHRAPGSVGQCATPSRVFKGVRMPGHMGTDTVTTKNLEVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
+D ++ LILVKG VPGA K + VR +
Sbjct: 179 RIDAEQNLILVKGAVPGA-KGGIVRVRMA 206
>gi|114589225|ref|XP_516751.2| PREDICTED: hypothetical protein isoform 2 [Pan troglodytes]
Length = 348
Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats.
Identities = 77/219 (35%), Positives = 110/219 (50%), Gaps = 3/219 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAVQVGAGEAKVKN 60
R G++A KLGM ++ +G++ VT+L + +C V+ + + + NG MA G+ +
Sbjct: 96 RVGLIALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTSKENCNGKMATLSVGGKTVSRF 155
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
F P K+ + D+ + G+ ++F GQ VDVT TIGKGF
Sbjct: 156 RKATSILEFYRELGLPPKQTVKIFNITDNAAIKPGTPLYAAHFRPGQYVDVTAKTIGKGF 215
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G MKR F G ATHG + +HR G+ D GRV+ KM G+MG T L+V
Sbjct: 216 QGVMKRWGFKGQPATHGQTKTHRRPGAVAT-GDIGRVWPGTKMPGKMGNIYRTEYGLKVW 274
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
++ K +I V G VPG KN + VRDS A GK
Sbjct: 275 RINTKHNIIYVNGSVPG-HKNCLVKVRDSKLPAYKDLGK 312
>gi|91786167|ref|YP_547119.1| 50S ribosomal protein L3 [Polaromonas sp. JS666]
gi|123165529|sp|Q12GX1|RL3_POLSJ RecName: Full=50S ribosomal protein L3
gi|91695392|gb|ABE42221.1| LSU ribosomal protein L3P [Polaromonas sp. JS666]
Length = 227
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 87/222 (39%), Positives = 124/222 (55%), Gaps = 3/222 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GM ++ +G +PVTV+ + N +V +T +GY A+QV G K V
Sbjct: 6 SLGLLGRKVGMMRLFTDDGDTVPVTVVDVSNNRVTQVKTEANDGYDALQVAFGARKASRV 65
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFS--PSYFTVGQLVDVTGMTIGKG 119
+KP G + V + L EFRV D F VGQLVDV G +IGKG
Sbjct: 66 TKPAAGHLAKAGVEAGEILKEFRVTADVAGKYAAGTVVPAADVFAVGQLVDVQGTSIGKG 125
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
++G +KRHN RA+HG S SH GS G QDPGRVF K+M G +G VT +NL +
Sbjct: 126 YAGTIKRHNMSSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTVTTQNLNI 185
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
V +D+ R L++++G VPG+ K ++ VR + K+ K +
Sbjct: 186 VRIDEARQLLMIRGAVPGS-KGGFVTVRAAIKAKPTTAAKGA 226
>gi|161723281|ref|NP_758399.2| 50S ribosomal protein L3 [Mycoplasma penetrans HF-2]
gi|42559645|sp|Q8EUB3|RL3_MYCPE RecName: Full=50S ribosomal protein L3
Length = 310
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 80/213 (37%), Positives = 115/213 (53%), Gaps = 7/213 (3%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ RK+GM + +GRRIPVT++ + V+ ++T +KNGY+A +VG + + K ++KP
Sbjct: 4 ILGRKIGMIQSFLEDGRRIPVTIIQAEPNVVLENKTQEKNGYVATKVGFQQIEEKKLNKP 63
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+G+F + K EFR VG F G VD +T GKGF+GA+
Sbjct: 64 QKGYFKKIKTDAFKHTKEFRNVSG---YNVGDKILVDIFNSGDKVDAQAITKGKGFTGAI 120
Query: 125 KRHNFGGLRATHGVSISHRSHGST---GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
KR NF HG HR GS RV K +KM+G G VT+ NL VVS
Sbjct: 121 KRWNFKVGPLGHGAGYPHRYQGSISFGRGGSQGQRVPKGQKMSGHYGHELVTISNLTVVS 180
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
++ ++ LILVKG VPG NS +L++ + KS
Sbjct: 181 IELEKNLILVKGSVPGPV-NSLVLLKTTVKSKK 212
>gi|47212780|emb|CAF95545.1| unnamed protein product [Tetraodon nigroviridis]
Length = 336
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 80/217 (36%), Positives = 120/217 (55%), Gaps = 4/217 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAV-QVGAGEAKVK 59
R G+VA KLGM ++ G R VT+L + +C V+ + ++ +G+ A VG A
Sbjct: 84 RVGLVAVKLGMAPIWTKAGERHVVTMLQVQDCHVIKYLPKEEYDGHTAALVVGGKNASPF 143
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
S+ F + V PK+K+ F++ DD L+ G+ ++F GQ VDVT +IGKG
Sbjct: 144 YKSEQQMEMFRNAGVPPKQKITTFKIS-DDALIKPGTPLYAAHFRPGQYVDVTAKSIGKG 202
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G MKR F G A+HG + +HR G++G DP +VFK KKM G MG +T L++
Sbjct: 203 FQGVMKRWGFKGQPASHGQTKTHRRPGASGPGGDPAKVFKGKKMPGMMGNIYITAFGLKI 262
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
V+ K ++ V G VPG +N + VRD+ + +
Sbjct: 263 WRVNTKYNVLYVHGSVPG-HRNCLLKVRDTVLPSRSS 298
>gi|19114797|ref|NP_593885.1| mitochondrial ribosomal protein subunit L9 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|74665370|sp|Q9P6P6|RM09_SCHPO RecName: Full=60S ribosomal protein L9, mitochondrial; Flags:
Precursor
gi|7708596|emb|CAB90144.1| mitochondrial ribosomal protein subunit L9 (predicted)
[Schizosaccharomyces pombe]
Length = 259
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 97/217 (44%), Positives = 132/217 (60%), Gaps = 2/217 (0%)
Query: 1 MRSGVVARKLGMTCVYNI-EGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
+R GV+ K GMT ++ G ++P+T+L D Q + RT +K+GY AVQVG+G K K
Sbjct: 42 LRPGVILVKKGMTNAWDEKTGMQVPLTILQFDRVQAIDVRTKEKHGYYAVQVGSGIRKPK 101
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+++K +G F S N+ PK + EFRV+ L+ G++F+ YF Q VDV G+T GKG
Sbjct: 102 SITKAEQGNFFSHNIYPKMHVREFRVRDASGLVSPGTIFTTDYFKPKQYVDVKGITKGKG 161
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G MKR F G A+HG S+SHR+ GSTG P RV +KMAG MG TVKNL V
Sbjct: 162 FAGVMKRWGFSGGNASHGASLSHRTPGSTGQNTTPSRVLPGRKMAGHMGHRSRTVKNLLV 221
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
+VD ILVKG +PG K S + V D+ + +
Sbjct: 222 WAVDADLECILVKGSIPGPNK-SAVYVTDTINRSTSA 257
>gi|88704378|ref|ZP_01102092.1| Ribosomal protein L3 [Congregibacter litoralis KT71]
gi|88701429|gb|EAQ98534.1| Ribosomal protein L3 [Congregibacter litoralis KT71]
Length = 184
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 81/184 (44%), Positives = 109/184 (59%), Gaps = 1/184 (0%)
Query: 29 HLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKD 88
+ +V + D +GY ++QV AG K VSK G F+ V + L+EFR+ +
Sbjct: 2 EVSPNRVTQIKENDSDGYRSIQVTAGSRKAAKVSKSEAGLFAKAGVEAGRGLWEFRLSAE 61
Query: 89 DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGST 148
++ VG+ + F GQ VDV G + GKGF G +KR NF ATHG S+SHR+ GS
Sbjct: 62 EEGFEVGAELTVERFEEGQKVDVAGKSKGKGFQGVIKRWNFSMQDATHGNSLSHRAPGSI 121
Query: 149 GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRD 208
G Q PGRVFK KKM+G+MG VTV+ LE+V VD +R L+L+KG VPGA + VR
Sbjct: 122 GQCQTPGRVFKGKKMSGQMGNTNVTVQGLEIVRVDAERNLLLIKGAVPGAPGGDVV-VRP 180
Query: 209 SFKS 212
+ K
Sbjct: 181 AVKG 184
>gi|71018891|ref|XP_759676.1| hypothetical protein UM03529.1 [Ustilago maydis 521]
gi|46099434|gb|EAK84667.1| hypothetical protein UM03529.1 [Ustilago maydis 521]
Length = 373
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 98/218 (44%), Positives = 129/218 (59%), Gaps = 7/218 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN----GYMAVQVGAGEAK 57
R G++A K GMT + G RIP TVL + + QV H + Y A+QV A + K
Sbjct: 92 RVGLIAVKRGMTSFFLPNGERIPATVLQVHSNQVSAHIGFGPDATESTYTALQVAAVDTK 151
Query: 58 V-KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTI 116
+V+K ++G + KK+ D L+P+G+ S +F GQ VDV +T
Sbjct: 152 STYHVTKQIQGHLKKAGIIKGKKIIREFPVSSDALVPLGTQLSAVHFVPGQSVDVRAITR 211
Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM-GGNRVTVK 175
G+GF G MKRH F GLRA+HGVSISHRSHGSTG QDPGRV+ KMAGRM G T+
Sbjct: 212 GRGFQGVMKRHGFHGLRASHGVSISHRSHGSTGANQDPGRVWPGTKMAGRMGGNKHGTIH 271
Query: 176 NLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
NL VV VD ++ LI VKG VPG K S + ++D+ + +
Sbjct: 272 NLLVVRVDAEKDLIYVKGNVPGPKGGS-VTLQDARRPS 308
>gi|118602213|ref|YP_903428.1| 50S ribosomal protein L3P [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|226730558|sp|A1AVK0|RL3_RUTMC RecName: Full=50S ribosomal protein L3
gi|118567152|gb|ABL01957.1| LSU ribosomal protein L3P [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 238
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 94/225 (41%), Positives = 138/225 (61%), Gaps = 11/225 (4%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG-------A 53
M G+V +K+GMT + + +G PV+V+ ++ ++V +T+D NGY A+QV
Sbjct: 1 MAMGLVGQKIGMTRLISDDGSITPVSVIKIELNRIVQTKTVDTNGYSAIQVTTGVKVNKK 60
Query: 54 GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTG 113
GEAKV V ++G ++ + L+EFRV+ D+ + + S F+ G V+V G
Sbjct: 61 GEAKVHRVPAAIKGHYAKTSQEIGLGLWEFRVEADE--ITDATSVDISLFSAGHYVNVVG 118
Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
+ GKGF G +KRHNF ATHG SISHR+ GSTG Q+PGRVFK KKMAG MG +VT
Sbjct: 119 RSKGKGFQGGVKRHNFQMQDATHGNSISHRAIGSTGQCQEPGRVFKGKKMAGHMGNEQVT 178
Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVR-DSFKSAVNCK 217
+ L++V VD +R +I VKG +PGA K ++ + S K+ +N +
Sbjct: 179 QECLKIVKVDSERNIIFVKGSIPGATKG-FVKISLSSKKNKINQE 222
>gi|145356307|ref|XP_001422374.1| Putative mitochondrial ribosomal protein L3 [Ostreococcus
lucimarinus CCE9901]
gi|144582616|gb|ABP00691.1| Putative mitochondrial ribosomal protein L3 [Ostreococcus
lucimarinus CCE9901]
Length = 211
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 102/212 (48%), Positives = 132/212 (62%), Gaps = 3/212 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAVQVGAGEAKVKN 60
R+G VA K GMTC ++ G RIP+TVL +D+C+VV +T +GY AVQVG G K K
Sbjct: 2 RTGAVAIKTGMTCDWDARGTRIPLTVLWIDDCEVVAAKTSSGADGYDAVQVGYGSRKPKQ 61
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+K G+F + K+ L EFR D +L G+ + ++F GQ VDV G+T GKGF
Sbjct: 62 VTKAELGYFVRRKTNIKRALCEFRTSA-DGVLAPGTAITAAHFAAGQYVDVQGVTKGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G MKR F G A+HG + HR+HGS G QDPGRVFK KKMAGRMGG TV++ V
Sbjct: 121 QGPMKRWGFSGQPASHGNTKKHRAHGSIGQCQDPGRVFKGKKMAGRMGGRTRTVQSAYVY 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD ++ L+ VKG VPG + +RDS +
Sbjct: 181 KVDTEKNLVYVKGQVPG-NAGMAVKIRDSLRK 211
>gi|323342789|ref|ZP_08083021.1| 50S ribosomal protein L3 [Erysipelothrix rhusiopathiae ATCC 19414]
gi|322463901|gb|EFY09095.1| 50S ribosomal protein L3 [Erysipelothrix rhusiopathiae ATCC 19414]
Length = 230
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 72/220 (32%), Positives = 116/220 (52%), Gaps = 5/220 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RKLGMT V+ +G+ IPV+V+ + V+ +T++ + Y AVQ+GA + K +
Sbjct: 1 MKGLLGRKLGMTQVFTTDGKLIPVSVVEVLPNVVLQKKTMESDNYEAVQLGAFDVKEQRA 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+K + + +PKK + E + VG+ F+ G+ VDVTG + G GF
Sbjct: 61 NKSEIAHAAKASTAPKKFVREIAGSEM-MNFEVGAEIKADLFSEGEYVDVTGTSRGHGFQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQ-DPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G++ R N HG S HR GS +P + K + + G+ GG T + LEV+
Sbjct: 120 GSIVRANQKIGPKAHG-SGFHRGVGSLATGGLNPAVIKKGRILPGQHGGYTTTNQKLEVI 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
VD + +L+KG +PG KK +++V+ + K V K V
Sbjct: 179 KVDTESNYLLIKGNIPGPKKG-FVIVKSTVKR-VKSKDPV 216
>gi|119953267|ref|YP_945476.1| 50S ribosomal protein L3 [Borrelia turicatae 91E135]
gi|254803656|sp|A1QZR4|RL3_BORT9 RecName: Full=50S ribosomal protein L3
gi|119862038|gb|AAX17806.1| LSU ribosomal protein L3P [Borrelia turicatae 91E135]
Length = 209
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 87/214 (40%), Positives = 130/214 (60%), Gaps = 6/214 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT V+ G +PVTV+ + V+ +T++++GY A+ +G+ + + +
Sbjct: 1 MLGLIGKKVGMTQVFQGNGVVVPVTVIEFEPNYVIGKKTVERDGYDALIMGSVDLRSSKI 60
Query: 62 SKPMRGFFSSVNV-SPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SKP+RG + ++ PK+ + EF+ K G F + VD+TG T GKGF
Sbjct: 61 SKPIRGQYKNLENVEPKRYVIEFKGLKG---YDAGDEIGLDAFREIKYVDITGTTKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GAMKRHNF G ++HG S HR G TG P R FK KMAGRMGG + T++NLEVV
Sbjct: 118 QGAMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGEQQTIQNLEVV 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
+D+++ ILVKG VPG K S+++V+ + K V
Sbjct: 177 FIDEEKRAILVKGAVPG-VKGSFVIVKKAKKVGV 209
>gi|171689544|ref|XP_001909712.1| hypothetical protein [Podospora anserina S mat+]
gi|170944734|emb|CAP70845.1| unnamed protein product [Podospora anserina S mat+]
Length = 382
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 97/220 (44%), Positives = 136/220 (61%), Gaps = 2/220 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+GV+A K GMT + G RIP TVL LD Q V+++T +GY AVQVG GE KN+
Sbjct: 84 RAGVLAIKKGMTAFMGLTGTRIPCTVLQLDRVQTVLNKTRKDHGYWAVQVGFGERDPKNI 143
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
PM G++ + ++PK++L EF+V+ + LLPVG P +F +GQ VDV + G GF+
Sbjct: 144 GAPMLGYYEAKGIAPKEQLAEFKVRDEKGLLPVGVQLMPDWFYIGQRVDVRSNSRGMGFA 203
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP-GRVFKNKKMAGRMGGNRVTVKNLEVV 180
G MKRH F G A+HG S +HR+ GS G Q RV KKM GRMG RVTV+NL ++
Sbjct: 204 GGMKRHGFSGQEASHGNSKNHRTIGSAGPSQGSGSRVLPGKKMPGRMGNQRVTVQNLPIL 263
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
+D+ G+++VKG V G K + ++D+ K + +
Sbjct: 264 LIDNDLGIVVVKGAVAGP-KGCVVKIQDACKKPPPPEEHI 302
>gi|260909750|ref|ZP_05916444.1| 50S ribosomal protein L3 [Prevotella sp. oral taxon 472 str. F0295]
gi|260636175|gb|EEX54171.1| 50S ribosomal protein L3 [Prevotella sp. oral taxon 472 str. F0295]
Length = 204
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 84/206 (40%), Positives = 117/206 (56%), Gaps = 5/206 (2%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ RK+GMT V++ +G+ +P TV+ C V +T++ +GY AVQ+ GEAK +K
Sbjct: 3 GLIGRKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVETDGYNAVQLAYGEAKKNRTTK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
M G F +PKK L EF K D +G + F + VDV G + GKGF G
Sbjct: 63 AMAGIFDKAGTTPKKHLAEF---KFDTEYNLGDTITVDLFEGAEFVDVVGTSKGKGFQGV 119
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G + THG R GS G P +VFK +M G+MGG+RVT +NL+V+ V
Sbjct: 120 VKRHGFGGVGQTTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLKVLKV 179
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRD 208
+ LILVKG V G S +L++
Sbjct: 180 IPEHNLILVKGSVAGC-NGSTLLIKK 204
>gi|94968254|ref|YP_590302.1| 50S ribosomal protein L3 [Candidatus Koribacter versatilis
Ellin345]
gi|123381602|sp|Q1ISC2|RL3_ACIBL RecName: Full=50S ribosomal protein L3
gi|94550304|gb|ABF40228.1| LSU ribosomal protein L3P [Candidatus Koribacter versatilis
Ellin345]
Length = 244
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 78/226 (34%), Positives = 122/226 (53%), Gaps = 11/226 (4%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVK 59
M +G++ +K+GMT +++ +G PVTVL C + +T +K+GY A QVG E K
Sbjct: 1 MINGLIGKKIGMTQLFDSKGDVRPVTVLQAGPCVITQRKTANKDGYDAAQVGLVEFVKET 60
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKD-------DDLLPVGSVFSPSYFTVGQLVDVT 112
++K G ++ P + L EF + D + + VG F + VDVT
Sbjct: 61 RLTKAQLGHLGKNDLPPVRTLHEFAIVADGPSEAESNGEVKVGDKVLVDLFEGSKFVDVT 120
Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
G++ G+GF+G +KRH F G +HG + GS G P RVFK +MAG MG ++V
Sbjct: 121 GVSKGRGFAGVVKRHKFAGGARSHGSMF--QISGSIGSSAFPSRVFKGMRMAGHMGQDQV 178
Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
TV+NL ++ +D L++V+G VPG K++ + + S K +G
Sbjct: 179 TVRNLRILGIDKDENLLVVEGAVPGP-KDATVFITMSKKPPRERRG 223
>gi|150020845|ref|YP_001306199.1| 50S ribosomal protein L3 [Thermosipho melanesiensis BI429]
gi|166234604|sp|A6LLL3|RL3_THEM4 RecName: Full=50S ribosomal protein L3
gi|149793366|gb|ABR30814.1| ribosomal protein L3 [Thermosipho melanesiensis BI429]
Length = 205
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 90/208 (43%), Positives = 125/208 (60%), Gaps = 6/208 (2%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ RKLGMT V+ + + +PVTV+ C VV +T++ +GY AVQ+G EAK V+KP
Sbjct: 4 IIGRKLGMTRVFVGD-KVVPVTVIKAGPCFVVQKKTIETDGYNAVQLGFEEAKK--VNKP 60
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
M G F V+P K L EFRV +D D VG F+ G +D+TG + G+GF+GAM
Sbjct: 61 MEGVFKKAGVNPLKVLKEFRV-EDPDKFEVGQEIKVDIFSEGDKIDITGWSKGRGFAGAM 119
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR F G +HG HR GS G +P R+FK KKM G+ G RVT+ N E+V +D
Sbjct: 120 KRWGFRGGPKSHGAK-FHRELGSVGQHSEPARIFKGKKMPGQYGNERVTILNSEIVKIDV 178
Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKS 212
+ LI VKG VPGA + +L++ + +
Sbjct: 179 ENNLIAVKGGVPGA-RGGLVLIKSAKRG 205
>gi|83319916|ref|YP_424660.1| 50S ribosomal protein L3 [Mycoplasma capricolum subsp. capricolum
ATCC 27343]
gi|90110058|sp|P10134|RL3_MYCCT RecName: Full=50S ribosomal protein L3
gi|83283802|gb|ABC01734.1| 50 ribosomal protein L3 [Mycoplasma capricolum subsp. capricolum
ATCC 27343]
Length = 223
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 78/217 (35%), Positives = 127/217 (58%), Gaps = 6/217 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+ MT V+ G+ +PVTV+ + V+ +T+D +GY+AVQ+G + +V V
Sbjct: 1 MKGILGRKVEMTQVFTNSGQLVPVTVVEVLPNTVLQVKTIDSDGYVAVQLGTTDKRVNLV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F N +PK+ + E R + + + F G+ VDVTG++ GKGF+
Sbjct: 61 NKPELGHFKKANSNPKRFVKEIRNMQGYE--IGQVINVSDIFVSGEYVDVTGISKGKGFA 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRHN+ HG S HR GS G R+FK+KKM G MG + T++NLE+++
Sbjct: 119 GGIKRHNYSRGPMAHG-SGYHRGIGSMGAI--INRIFKSKKMPGHMGNAKRTIQNLEIIA 175
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+D ++L+KG +PG KNS++ ++ + K + +
Sbjct: 176 IDQSNNIMLIKGSIPGP-KNSFVQIKQNVKGMSSKQA 211
>gi|13357791|ref|NP_078065.1| 50S ribosomal protein L3 [Ureaplasma parvum serovar 3 str. ATCC
700970]
gi|167972002|ref|ZP_02554279.1| ribosomal protein L3 [Ureaplasma parvum serovar 6 str. ATCC 27818]
gi|170762111|ref|YP_001752314.1| 50S ribosomal protein L3 [Ureaplasma parvum serovar 3 str. ATCC
27815]
gi|42559705|sp|Q9PQR0|RL3_UREPA RecName: Full=50S ribosomal protein L3
gi|189029487|sp|B1AIM0|RL3_UREP2 RecName: Full=50S ribosomal protein L3
gi|11276669|pir||H82914 ribosomal protein L3 UU231 [imported] - Ureaplasma urealyticum
gi|6899201|gb|AAF30640.1|AE002122_9 ribosomal protein L3 [Ureaplasma parvum serovar 3 str. ATCC 700970]
gi|168827688|gb|ACA32950.1| ribosomal protein L3 [Ureaplasma parvum serovar 3 str. ATCC 27815]
gi|186700755|gb|EDU19037.1| ribosomal protein L3 [Ureaplasma parvum serovar 6 str. ATCC 27818]
Length = 233
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 77/210 (36%), Positives = 114/210 (54%), Gaps = 8/210 (3%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ K+GMT V+ G+ + TV++++ +V+ +T +K+GY A+Q+G K K ++KP
Sbjct: 4 LLGTKVGMTQVFTETGKAVAATVIYVEPNKVLAVKTNEKDGYSAIQIGYETVKEKALNKP 63
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+ G F N PK+ + EFR + VG+ + S F GQLV+ T G GF+G++
Sbjct: 64 LLGQFKKANSDPKRHIKEFRDVVAE----VGAELTVSEFEPGQLVNAQAYTKGHGFTGSI 119
Query: 125 KRHNFGGLRATHGVSISHRSHGST---GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
KRHNF HG HR GS RVFK K+ G G VT KNL V+
Sbjct: 120 KRHNFSMGPMGHGAGYPHRYVGSIAKGRGGSQAQRVFKGTKLPGHYGHELVTTKNLLVLD 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
V LIL+KG +PG K S +L++ + K
Sbjct: 180 VKANENLILIKGAIPGP-KGSIVLLKSAKK 208
>gi|148284214|ref|YP_001248304.1| 50S ribosomal protein L3 [Orientia tsutsugamushi str. Boryong]
gi|146739653|emb|CAM79442.1| 50S ribosomal protein L3 [Orientia tsutsugamushi str. Boryong]
Length = 229
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 106/211 (50%), Positives = 142/211 (67%), Gaps = 2/211 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
RSG++A KLGM+ ++ GR++ +T+L +D CQV+ H+ + K+GY AV +G V
Sbjct: 18 RSGLIAEKLGMSSKFDESGRKVAITLLKVDVCQVLWHKLVSKDGYNAVILGYKNISPFKV 77
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
KPM FS + PK + EF+V +D +L + S+ SYF VGQ VDV G+TIGKGF+
Sbjct: 78 KKPMHSIFSRAKIEPKAIIKEFKV-AEDKMLEIASILDASYFRVGQYVDVRGVTIGKGFA 136
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
GAMKRH F GL A+HGVSISHRSHGSTG R PGR FKNKKMAG MG T++NL V S
Sbjct: 137 GAMKRHGFRGLEASHGVSISHRSHGSTGNRAYPGRTFKNKKMAGHMGVRFATIQNLRVDS 196
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD ++ L++++G +PG S + + DS K
Sbjct: 197 VDLEKRLLVIQGSIPGKS-GSIVYITDSIKK 226
>gi|41053377|ref|NP_956301.1| 39S ribosomal protein L3, mitochondrial [Danio rerio]
gi|33416933|gb|AAH55650.1| Mitochondrial ribosomal protein L3 [Danio rerio]
gi|94734481|emb|CAK11310.1| mitochondrial ribosomal protein L3 [Danio rerio]
Length = 319
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 82/220 (37%), Positives = 114/220 (51%), Gaps = 4/220 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNG--YMAVQVGAGEAKVK 59
R G+VA KLGM V++ G R VT+L + +C VV H + + A+ VG
Sbjct: 70 RVGLVAIKLGMMPVWSKSGERHVVTMLQVKDCHVVKHLSKEDYNGHTSALVVGGKNVSPF 129
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+ F + + PK+KL F V D+ ++ G+ ++F GQ VDVT TIGKG
Sbjct: 130 HRPVGYLEIFQNAGIPPKQKLTTFCVT-DNAIIKPGTPLYAAHFRPGQYVDVTAKTIGKG 188
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G MKR F G A+HG + +HR G+ G DP +VFK KM GRMG T L++
Sbjct: 189 FQGVMKRWGFKGQPASHGQTKTHRRPGALGPGGDPAKVFKGTKMPGRMGNVYNTNFGLKI 248
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
V+ K ++ V G VPG +N + VRD+ K K
Sbjct: 249 WRVNTKYNILYVNGSVPG-HRNCLVKVRDTVLPTRLEKNK 287
>gi|147906354|ref|NP_001088168.1| mitochondrial ribosomal protein L3 [Xenopus laevis]
gi|54035102|gb|AAH84076.1| LOC494992 protein [Xenopus laevis]
Length = 341
Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 110/211 (52%), Gaps = 5/211 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAV-QVGAGEAKVK 59
R G++A KLGM ++ G + VT+L + +C V+ + ++ +G + VG
Sbjct: 91 RVGLIAVKLGMMPIWTKSGEKHAVTMLQVRDCHVIKYTPKEEFDGKTSSLTVGGKNVSPF 150
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
S+ + + V PK+K+ F+V D+ ++ G+ ++F GQ VDVT TIGKG
Sbjct: 151 YKSESVMEMYREAGVPPKQKISIFKVS-DNAIIKPGTPLYAAHFRPGQFVDVTAKTIGKG 209
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G MKR + G A+HG + +HR G+ DP RVF KM GRMG T L+V
Sbjct: 210 FQGVMKRWGYKGQPASHGQTKTHRRPGAIS-SGDPARVFPGTKMPGRMGNIYRTSYALKV 268
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
V+ K +I V G VPG N + V D+
Sbjct: 269 WRVNTKHNIIYVNGSVPG-HTNCLVKVTDTK 298
>gi|237718743|ref|ZP_04549224.1| 50S ribosomal protein L3 [Bacteroides sp. 2_2_4]
gi|229451875|gb|EEO57666.1| 50S ribosomal protein L3 [Bacteroides sp. 2_2_4]
Length = 195
Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats.
Identities = 79/196 (40%), Positives = 116/196 (59%), Gaps = 4/196 (2%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
MT V++ +G+ +P TV+ C V +T++K+GY AVQ+G + K K+ +KP+ G F
Sbjct: 1 MTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYAAVQLGFQDKKEKHTTKPLMGHFKR 60
Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF-G 130
V+PK+ L EF ++ L +G + F VDV G + GKGF G +KRH F G
Sbjct: 61 AGVTPKRHLAEF--KEFGTELNLGDTITVEMFNDANFVDVVGTSKGKGFQGVVKRHGFGG 118
Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190
+ATHG R GS G P +VFK +M G++GG+RVTV+NL+V+ V L+L
Sbjct: 119 VGQATHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKVIADHNLLL 178
Query: 191 VKGCVPGAKKNSWILV 206
+KG +PG K S +L+
Sbjct: 179 IKGSIPGC-KGSIVLI 193
>gi|206890251|ref|YP_002249245.1| ribosomal protein L3 [Thermodesulfovibrio yellowstonii DSM 11347]
gi|206742189|gb|ACI21246.1| ribosomal protein L3 [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 205
Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats.
Identities = 89/201 (44%), Positives = 121/201 (60%), Gaps = 6/201 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVKN 60
++ +K+GMT +++ EGR IPVTV+ C +V R+ +KNGY AVQ+G E K KN
Sbjct: 1 MKAILGKKIGMTQIFDEEGRIIPVTVIEAGPCWIVQVRSKEKNGYEAVQLGFQEIKKEKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V KP+ G F + P + L EF++ VG + FT G +V + G++ GKG+
Sbjct: 61 VPKPLLGIFKKAGIPPCRVLKEFKMTG----FNVGDKVTVEIFTKGDVVSIAGISKGKGY 116
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G MKRHNF G THG S+ +R+ GS G P RV+K K MAG MG RVTVKNL +V
Sbjct: 117 QGVMKRHNFAGGPDTHG-SMFNRAPGSIGASSFPSRVWKGKGMAGHMGNERVTVKNLTIV 175
Query: 181 SVDDKRGLILVKGCVPGAKKN 201
V ++ L+LVKG VPG +
Sbjct: 176 DVIPEQNLLLVKGAVPGGENG 196
>gi|126022788|ref|NP_043617.2| ribosomal protein L3 [Odontella sinensis]
gi|125987859|sp|P49569|RK3_ODOSI RecName: Full=50S ribosomal protein L3, chloroplastic
Length = 207
Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 80/206 (38%), Positives = 117/206 (56%), Gaps = 3/206 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ K+GMT +++ G IPVT+L + C + +T +GY A+Q+G G K+
Sbjct: 1 MSLGLLGNKIGMTQIFDESGNIIPVTILKVGPCVITQVKTDLNDGYNAIQIGYGTVSNKS 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+++P G N+ P K L EFRV ++ VG V + + GQ +DVTG + GKGF
Sbjct: 61 LTQPELGHLQKSNIQPLKYLKEFRVNNPEE-FKVGQVVNVESLSTGQFIDVTGKSSGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
SG KRHNF THG S +HR+ GS G PGRV KKMAG++G K L+++
Sbjct: 120 SGLQKRHNFTRGPMTHG-SKNHRAPGSIGMGTTPGRVLPGKKMAGQLGNKVTKTKKLKII 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
V+ +++VKG VPG N + +
Sbjct: 179 QVNGNENILVVKGSVPGKPGN-LVTI 203
>gi|297623274|ref|YP_003704708.1| 50S ribosomal protein L3 [Truepera radiovictrix DSM 17093]
gi|297164454|gb|ADI14165.1| 50S ribosomal protein L3 [Truepera radiovictrix DSM 17093]
Length = 206
Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 85/213 (39%), Positives = 119/213 (55%), Gaps = 7/213 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ K+GMT V+ + R +PVTV+ C VV +T + +GY AVQ+G + K
Sbjct: 1 MKGLLGTKVGMTQVWQGD-RLVPVTVVLAGPCPVVQRKTPETDGYSAVQLGWIAKRDKVA 59
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G VS + + + D P G + F GQ VDVTG + G+G +
Sbjct: 60 TKPELGHAKKAGVSA-----QRHLVEFRDYDPEGDTVTVEIFKPGQKVDVTGTSKGRGTA 114
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR NF GL A+HGV HR+ GS G R+ PGRV+K K+MAGR G RVT LE++
Sbjct: 115 GVMKRWNFAGLPASHGVKKKHRAPGSIGQRKFPGRVYKGKRMAGRYGNERVTTLGLELLE 174
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
V L+L+KG +PGA ++V+ S + A
Sbjct: 175 VRPDDNLLLIKGSIPGA-NGGLVVVKASTRGAK 206
>gi|256383913|gb|ACU78483.1| 50S ribosomal protein L3 [Mycoplasma mycoides subsp. capri str.
GM12]
gi|256384744|gb|ACU79313.1| 50S ribosomal protein L3 [Mycoplasma mycoides subsp. capri str.
GM12]
gi|296455991|gb|ADH22226.1| 50S ribosomal protein L3 [synthetic Mycoplasma mycoides
JCVI-syn1.0]
Length = 223
Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 79/217 (36%), Positives = 128/217 (58%), Gaps = 6/217 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+ MT V+ G+ +PVTV+ + V+ +T+D +GY+AVQ+G + +V V
Sbjct: 1 MKGILGRKVEMTQVFTSAGQLVPVTVVEVLPNTVLQVKTIDSDGYVAVQLGTTDKRVNLV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F N +PK+ + E R + +L + F G+ VDVTG++ GKGF+
Sbjct: 61 NKPELGHFKKANSNPKRFVKEIRNMQGYEL--GQVINVSDIFVSGEYVDVTGISKGKGFA 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRHN+ HG S HR GS G R+FK+KKM G MG + T++NLE+++
Sbjct: 119 GGIKRHNYARGPMAHG-SGYHRGIGSMGAI--INRIFKSKKMPGHMGNAKRTIQNLEIIA 175
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+D ++L+KG +PG KNS++ ++ + K + +
Sbjct: 176 IDQPNNIMLIKGSIPGP-KNSFVQIKQNIKGMSSKQA 211
>gi|6005862|ref|NP_009139.1| 39S ribosomal protein L3, mitochondrial [Homo sapiens]
gi|133116|sp|P09001|RM03_HUMAN RecName: Full=39S ribosomal protein L3, mitochondrial; Short=L3mt;
Short=MRP-L3
gi|34754|emb|CAA29639.1| unnamed protein product [Homo sapiens]
gi|13097225|gb|AAH03375.1| Mitochondrial ribosomal protein L3 [Homo sapiens]
gi|48145557|emb|CAG33001.1| MRPL3 [Homo sapiens]
gi|119599615|gb|EAW79209.1| mitochondrial ribosomal protein L3 [Homo sapiens]
gi|312152442|gb|ADQ32733.1| mitochondrial ribosomal protein L3 [synthetic construct]
Length = 348
Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 76/219 (34%), Positives = 110/219 (50%), Gaps = 3/219 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAVQVGAGEAKVKN 60
R G++A KLGM ++ +G++ VT+L + +C V+ + + + NG MA G+ +
Sbjct: 96 RVGLIALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTSKENCNGKMATLSVGGKTVSRF 155
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
F P K+ + D+ + G+ ++F GQ VDVT TIGKGF
Sbjct: 156 RKATSILEFYRELGLPPKQTVKIFNITDNAAIKPGTPLYAAHFRPGQYVDVTAKTIGKGF 215
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G MKR F G ATHG + +HR G+ D GRV+ KM G+MG T L+V
Sbjct: 216 QGVMKRWGFKGQPATHGQTKTHRRPGAVAT-GDIGRVWPGTKMPGKMGNIYRTEYGLKVW 274
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
++ K +I V G VPG KN + V+DS A GK
Sbjct: 275 RINTKHNIIYVNGSVPG-HKNCLVKVKDSKLPAYKDLGK 312
>gi|311268535|ref|XP_001925073.2| PREDICTED: 39S ribosomal protein L3, mitochondrial [Sus scrofa]
Length = 399
Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 71/216 (32%), Positives = 114/216 (52%), Gaps = 5/216 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNG--YMAVQVGAGEAKVK 59
R G++A KLGM ++ +G++ VT+L + +C V+ + + + A+ VG
Sbjct: 147 RVGLIALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTPKENHNGRMAALTVGGKTVSHF 206
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+ S + F+ + + PK+K+ F V ++ ++ G+ ++F GQ VDVT TIGKG
Sbjct: 207 HKSASILEFYQELGLPPKQKVKIFNVTENA-VIKPGTPLYAAHFRPGQYVDVTAKTIGKG 265
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G M+R F G ATHG + +HR G+ D RV+ KM G++G T L+V
Sbjct: 266 FQGVMRRWGFKGQPATHGQTKTHRRPGAIST-GDVARVWPGTKMPGQLGNIDRTAFGLKV 324
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
++ K +I V G VPG KN + ++DS A
Sbjct: 325 WRINTKHNIIYVNGSVPG-HKNCLVKIKDSKLPAYK 359
>gi|66805433|ref|XP_636449.1| ribosomal protein L3, mitochondrial [Dictyostelium discoideum AX4]
gi|60464827|gb|EAL62946.1| ribosomal protein L3, mitochondrial [Dictyostelium discoideum AX4]
Length = 351
Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 100/208 (48%), Positives = 135/208 (64%), Gaps = 2/208 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G + +K+GM Y + PVTV+ L N QV + +G +QVGA E K+KNV
Sbjct: 66 RVGAIGKKVGMLTTYIGD-IAYPVTVIQLPNNQVTQIKRKVNDGVDMIQVGADEIKLKNV 124
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SK ++G F+ NV PK+ L EFRV ++ L +G+ P +F GQL+ V G GKGF+
Sbjct: 125 SKTLQGHFAKANVPPKRVLMEFRVTRNAMNLELGTPILPKHFLPGQLITVKGTNTGKGFA 184
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR +F G ATHGVS++HR+ GSTGCRQ PGRVFK +KM GR+GG TVKNL+V+
Sbjct: 185 GGMKRWHFSGQPATHGVSLTHRAIGSTGCRQTPGRVFKGRKMPGRLGGKSCTVKNLQVLK 244
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209
++ + +LVKG VPG KK ++ + DS
Sbjct: 245 INTEMNCLLVKGAVPG-KKGGYLKITDS 271
>gi|90075128|dbj|BAE87244.1| unnamed protein product [Macaca fascicularis]
Length = 348
Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 75/219 (34%), Positives = 108/219 (49%), Gaps = 3/219 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAVQVGAGEAKVKN 60
R G++A KLGM ++ +G + VT+L + +C V+ + + + NG A G+ +
Sbjct: 96 RVGLIALKLGMMPLWTKDGEKHVVTLLQVQDCHVLKYTSKENHNGKTAALSVGGKTVSRF 155
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
F P K+ + D+ + G+ ++F GQ VDVT TIGKGF
Sbjct: 156 RKATPVLEFYRELGLPPKQTVKIFNITDNAAIKPGTPLYAAHFRPGQYVDVTAKTIGKGF 215
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KR F G ATHG + +HR G+ D GRV+ KM G+MG T L+V
Sbjct: 216 QGVVKRWGFKGQPATHGQTKTHRRPGALST-GDIGRVWPGTKMPGKMGNIYRTAYGLKVW 274
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
++ K +I V G VPG KN + VRDS A GK
Sbjct: 275 RINTKHNIIYVNGSVPG-HKNCLVKVRDSKLPAYKDLGK 312
>gi|226321110|ref|ZP_03796652.1| ribosomal protein L3 [Borrelia burgdorferi 29805]
gi|226233520|gb|EEH32259.1| ribosomal protein L3 [Borrelia burgdorferi 29805]
gi|312149724|gb|ADQ29795.1| ribosomal protein L3 [Borrelia burgdorferi N40]
Length = 206
Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 91/211 (43%), Positives = 129/211 (61%), Gaps = 6/211 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT ++ G IPVTV+ ++ +T+D++GY A+ G+ + K V
Sbjct: 1 MLGLIGKKVGMTQIFQKNGIVIPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKSSKV 60
Query: 62 SKPMRGFFSS-VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SKP++G + S ++ PK+ + E K D G F + VDVTG T GKGF
Sbjct: 61 SKPIKGQYKSLKDIEPKRYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GAMKRHNF G ++HG S HR G TG P R FK KMAGRMGGN+ T++NLEVV
Sbjct: 118 QGAMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNQQTIQNLEVV 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+D+++ +LVKG VPGA K S+++V+ S K
Sbjct: 177 LIDEEKRALLVKGAVPGA-KGSFVVVKKSKK 206
>gi|50364938|ref|YP_053363.1| 50S ribosomal protein L3 [Mesoplasma florum L1]
gi|81827327|sp|Q6F1Z4|RL3_MESFL RecName: Full=50S ribosomal protein L3
gi|50363494|gb|AAT75479.1| 50S ribosomal protein L3 [Mesoplasma florum L1]
Length = 238
Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 83/217 (38%), Positives = 127/217 (58%), Gaps = 8/217 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+ MT V+ G+ +PVTV+ + ++ +TL+ NGY+A Q+G + + V
Sbjct: 1 MKGILGRKVEMTQVFTANGKLVPVTVVEVQPNTILQVKTLETNGYVATQLGVFDKRENLV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F N PK+ + E R + ++ V S + F GQ VDVTG++ GKGF+
Sbjct: 61 NKPELGQFKKANSVPKRFVKEIRNMEGFEVGSVIS--ASDIFETGQYVDVTGISKGKGFA 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
GA+KRHN+ HG S HR GS G R+FK+KKMAG MG + TV+NLEV++
Sbjct: 119 GAIKRHNYSRGPMAHG-SGYHRGIGSMGAI--INRIFKSKKMAGHMGHVKRTVQNLEVIA 175
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+D ++LVKG +PG K ++ ++ + K N +
Sbjct: 176 ID--NNIMLVKGSIPGPNKG-FVTIKANVKGLSNTQA 209
>gi|313678365|ref|YP_004056105.1| 50S ribosomal protein L3 [Mycoplasma bovis PG45]
gi|312950290|gb|ADR24885.1| ribosomal protein L3 [Mycoplasma bovis PG45]
Length = 276
Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats.
Identities = 79/213 (37%), Positives = 120/213 (56%), Gaps = 6/213 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT +Y G+RIPVTV+ + V T+++NGY+A Q+ E K K V
Sbjct: 1 MKGILGRKVGMTQIYTELGQRIPVTVVEVKPNVVTKVLTVEQNGYVATQLATVEKKAKRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
++P+ G F +PK+ + E R + +G + S F G+LVD+TG + GKGF+
Sbjct: 61 NRPLAGQFIQAKTTPKQYIKEIRGMQG---YELGQEVNASIFEAGELVDITGTSKGKGFA 117
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP--GRVFKNKKMAGRMGGNRVTVKNLEV 179
G +KR N +HG + TG D RV K M G +G + TV+NLE+
Sbjct: 118 GTIKRWNQHIGPKSHGGGGGSQPVRQTGSLGDISGNRVVKGMTMPGHLGSEKTTVQNLEI 177
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD ++LVKG +PGAKK S+++++ + K
Sbjct: 178 VKVDVANNILLVKGSIPGAKK-SFVIIKQAVKG 209
>gi|219685094|ref|ZP_03539914.1| ribosomal protein L3 [Borrelia garinii Far04]
gi|219673190|gb|EED30209.1| ribosomal protein L3 [Borrelia garinii Far04]
Length = 206
Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats.
Identities = 93/211 (44%), Positives = 128/211 (60%), Gaps = 6/211 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT ++ G IPVTV+ ++ +T+D++GY A+ G+ + K V
Sbjct: 1 MLGLIGKKVGMTQIFQKNGIVIPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKDSKV 60
Query: 62 SKPMRGFFSS-VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SKP++G + S ++ PKK + E K D G F + VDVTG T GKGF
Sbjct: 61 SKPIKGQYKSLKDIEPKKYVIEL---KGLDGYDPGDEIKVDVFKSVKYVDVTGTTKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GAMKRHNF G ++HG S HR G TG P R FK KMAGRMGGN+ T++NLEVV
Sbjct: 118 QGAMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNKQTIQNLEVV 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+D++ ILVKG VPGA K S+++V+ S K
Sbjct: 177 LIDEENRAILVKGAVPGA-KGSFVVVKKSKK 206
>gi|313665577|ref|YP_004047448.1| 50S ribosomal protein L3 [Mycoplasma leachii PG50]
gi|312949526|gb|ADR24122.1| 50S ribosomal protein L3 [Mycoplasma leachii PG50]
Length = 223
Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats.
Identities = 78/217 (35%), Positives = 127/217 (58%), Gaps = 6/217 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+ MT V+ G+ +PVTV+ + V+ +T+D +GY+AVQ+G + +V V
Sbjct: 1 MKGILGRKVEMTQVFTNSGQLVPVTVVEVLPNTVLQVKTIDSDGYVAVQLGTTDKRVNLV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F N +PK+ + E R + + + F G+ VDVTG++ GKGF+
Sbjct: 61 NKPELGHFKKANSNPKRFVKEIRNMQGYE--IGQVINVSDIFVSGEYVDVTGISKGKGFA 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRHN+ HG S HR GS G R+FK+KKM G MG + T++NLE+++
Sbjct: 119 GGIKRHNYSRGPMAHG-SGYHRGIGSMGAI--INRIFKSKKMPGHMGNAKRTIQNLEIIA 175
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+D ++L+KG +PG KNS++ ++ + K + +
Sbjct: 176 IDQTNNIMLIKGSIPGP-KNSFVQIKQNVKGMSSKQA 211
>gi|237733228|ref|ZP_04563709.1| 50S ribosomal protein L3 [Mollicutes bacterium D7]
gi|229383609|gb|EEO33700.1| 50S ribosomal protein L3 [Coprobacillus sp. D7]
Length = 232
Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats.
Identities = 79/204 (38%), Positives = 113/204 (55%), Gaps = 4/204 (1%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
MT V+ +G IPVTV+ D V+ +T+ +GY A+QVG + + K +K G
Sbjct: 1 MTQVFTTDGLLIPVTVVEADANVVLQKKTVATDGYDAIQVGFEDKREKLANKAELGIVKK 60
Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
N +PK+ + EFR + VG + F G++VDVTG + GKG+ G +KRH
Sbjct: 61 ANTAPKRFIKEFRYDEM-MSYEVGDKITVDSFVAGEVVDVTGTSKGKGYQGVIKRHGQRI 119
Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
HG S +HR GS G P R+ KK+ G+MG TV+NLEVV+VD + L+L+
Sbjct: 120 GPKGHG-SGAHRIVGSMGPIA-PNRIAPGKKLPGQMGHVTRTVQNLEVVAVDVENNLLLI 177
Query: 192 KGCVPGAKKNSWILVRDSFKSAVN 215
KG VPG KK ++V+ K+A
Sbjct: 178 KGSVPGPKKG-LVIVKSGIKAAGK 200
>gi|330906708|ref|XP_003295571.1| hypothetical protein PTT_01689 [Pyrenophora teres f. teres 0-1]
gi|311333041|gb|EFQ96334.1| hypothetical protein PTT_01689 [Pyrenophora teres f. teres 0-1]
Length = 331
Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats.
Identities = 95/224 (42%), Positives = 137/224 (61%), Gaps = 5/224 (2%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
+R+G++A K GMT +Y+ G+R TVL +D +VV H+ +KNGY AVQ+GAG+ + +
Sbjct: 84 LRTGLLAIKKGMTSMYDPETGKRAACTVLQVDRNEVVAHKRREKNGYWAVQIGAGQKEAR 143
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVG-SVFSPSYFTVGQLVDVTGMTIGK 118
NV++PM G F++ VSPK+ + EF V+ + L + ++FT GQ VDV G GK
Sbjct: 144 NVTRPMLGHFAAAGVSPKRWVAEFEVRDEAGLQVGIGEMVGANWFTKGQFVDVKGTNKGK 203
Query: 119 GFSGAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
GF+G MKRH FGG A+HG S+ HR + G + RV K+M G MG TVKNL
Sbjct: 204 GFAGGMKRHGFGGQPASHGQSLMHRGMGSAGGSQGSGSRVLPGKRMPGNMGNQSCTVKNL 263
Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
+V+ VD+ G+++V GCVPG + I V D+ KG ++
Sbjct: 264 KVLQVDEANGIVVVNGCVPGP-NDQIIRVSDALGKPWP-KGPMT 305
>gi|229917358|ref|YP_002886004.1| 50S ribosomal protein L3 [Exiguobacterium sp. AT1b]
gi|259646546|sp|C4KZP6|RL3_EXISA RecName: Full=50S ribosomal protein L3
gi|229468787|gb|ACQ70559.1| ribosomal protein L3 [Exiguobacterium sp. AT1b]
Length = 208
Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats.
Identities = 90/212 (42%), Positives = 128/212 (60%), Gaps = 5/212 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ KLGMT ++N G +PVTV+ ++ V+ +T+D +GY AVQ+G G+ K
Sbjct: 1 MAKGILGTKLGMTQIFNEAGEVVPVTVVAVEGNVVLQLKTVDTDGYEAVQLGFGDIKESR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + E R + +G F G+LVDVTG + GKGF
Sbjct: 61 QNKPSKGHAAKANATPKRFIKEVRTS--VEGYEIGQEIKADIFAAGELVDVTGTSKGKGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GA+KRH HG S HR GS G P RVFK K + G+MGG R T++NLEVV
Sbjct: 119 QGAIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKLLPGQMGGERKTIQNLEVV 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +RGL+LVKG +PGA+K S ++++ + K
Sbjct: 177 KVDVERGLLLVKGAIPGARK-SNVIIKSAVKG 207
>gi|288929340|ref|ZP_06423185.1| 50S ribosomal protein L3 [Prevotella sp. oral taxon 317 str. F0108]
gi|288329442|gb|EFC68028.1| 50S ribosomal protein L3 [Prevotella sp. oral taxon 317 str. F0108]
Length = 204
Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats.
Identities = 84/206 (40%), Positives = 117/206 (56%), Gaps = 5/206 (2%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ RK+GMT V++ +G+ +P TV+ C V +T++ +GY AVQ+ GEAK +K
Sbjct: 3 GLIGRKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVETDGYKAVQLAYGEAKKNRTTK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
M G F +PKK L EF K D +G + F + VDV G + GKGF G
Sbjct: 63 AMAGIFEKAGTTPKKHLAEF---KFDTEYNLGDTITVDLFEGAEFVDVVGTSKGKGFQGV 119
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G + THG R GS G P +VFK +M G+MGG+RVT +NL+V+ V
Sbjct: 120 VKRHGFGGVGQTTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLKVLKV 179
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRD 208
+ LILVKG V G S +L++
Sbjct: 180 IPEHNLILVKGSVAGC-NGSTLLIKK 204
>gi|42561270|ref|NP_975721.1| 50S ribosomal protein L3 [Mycoplasma mycoides subsp. mycoides SC
str. PG1]
gi|81829359|sp|Q6MSM6|RL3_MYCMS RecName: Full=50S ribosomal protein L3
gi|42492768|emb|CAE77363.1| 50S RIBOSOMAL PROTEIN L3 [Mycoplasma mycoides subsp. mycoides SC
str. PG1]
gi|301320560|gb|ADK69203.1| 50S ribosomal protein L3 [Mycoplasma mycoides subsp. mycoides SC
str. Gladysdale]
Length = 223
Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats.
Identities = 79/217 (36%), Positives = 129/217 (59%), Gaps = 6/217 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+ MT V+ G+ +PVTV+ + V+ +T+D +GY+AVQ+G + +V V
Sbjct: 1 MKGILGRKVEMTQVFTSAGQLVPVTVVEVLPNTVLQVKTIDSDGYVAVQLGTTDKRVNLV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F N +PK+ + E R + +L + F G+ VDVTG++ GKGF+
Sbjct: 61 NKPELGHFKKANSNPKRFVKEIRNMQGYEL--GQVINVSDIFVSGEYVDVTGISKGKGFA 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRHN+ HG S HR GS G R+FK+KKM G MG + T++NLE+++
Sbjct: 119 GGIKRHNYARGPMAHG-SGYHRGIGSMGAI--INRIFKSKKMPGHMGNAKRTIQNLEIIA 175
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+D ++L+KG +PG+ KNS++ ++ + K + +
Sbjct: 176 IDQPNNIMLIKGSIPGS-KNSFVQIKQNIKGMSSKQA 211
>gi|282878759|ref|ZP_06287527.1| 50S ribosomal protein L3 [Prevotella buccalis ATCC 35310]
gi|281299150|gb|EFA91551.1| 50S ribosomal protein L3 [Prevotella buccalis ATCC 35310]
Length = 204
Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats.
Identities = 82/204 (40%), Positives = 117/204 (57%), Gaps = 5/204 (2%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ RK+GMT V++ +G+ IP TV+ C V +T + +GY A+Q+G GEAK K +K
Sbjct: 3 GLIGRKIGMTSVFSADGKNIPCTVIEAGPCVVTQVKTEETDGYKALQLGFGEAKEKRTTK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P+ G F +PKK L EF K D +G + F + VDV G + GKGF G
Sbjct: 63 PLLGTFKKAGTTPKKHLVEF---KFDGEYNLGDTITVELFNDTEFVDVIGTSKGKGFQGV 119
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G + THG R G+ G P +VFK +M G+MGG+RVT +NL V+ V
Sbjct: 120 VKRHGFGGVGQRTHGQDDRARKPGAIGACSYPAKVFKGMRMGGQMGGDRVTTQNLRVLKV 179
Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
++ L++VKG G S +L+
Sbjct: 180 IPEKNLLIVKGSFAGC-NGSTVLI 202
>gi|242219427|ref|XP_002475493.1| mitochondrial 50S ribosomal protein L3 [Postia placenta Mad-698-R]
gi|220725308|gb|EED79301.1| mitochondrial 50S ribosomal protein L3 [Postia placenta Mad-698-R]
Length = 269
Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats.
Identities = 105/217 (48%), Positives = 141/217 (64%), Gaps = 5/217 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVV-HRTLDKN--GYMAVQVGAGEAKV 58
R+G++ARK GMT +++ G R PVTVL L+NCQV +T+ K+ Y AVQV A +
Sbjct: 2 RTGLIARKRGMTVMWDDHGARFPVTVLQLENCQVTANIKTVRKDLSEYHAVQVAATDRPA 61
Query: 59 KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
K +K M G F V PK+ + EF V D +P+G+ S +F GQ VDV ++GK
Sbjct: 62 KTATKQMLGHFKKAGVDPKRIVKEFPVTP-DAHVPIGTTLSAVHFVPGQYVDVIANSLGK 120
Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
GF G MK+ NF GLRA+HGVS+SHRS G+ G QDPGRV+ KKMAGR+GG R T +NL
Sbjct: 121 GFQGTMKKWNFKGLRASHGVSVSHRSAGAIGAHQDPGRVWPGKKMAGRLGGVRTTTQNLA 180
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
V+ VD LI V+GCVPG ++ ++VRD+ K ++
Sbjct: 181 VIRVDSALDLIFVRGCVPGID-DAHVMVRDAKKKMIS 216
>gi|307718206|ref|YP_003873738.1| 50S ribosomal protein L3 [Spirochaeta thermophila DSM 6192]
gi|306531931|gb|ADN01465.1| 50S ribosomal protein L3 [Spirochaeta thermophila DSM 6192]
Length = 208
Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats.
Identities = 91/211 (43%), Positives = 122/211 (57%), Gaps = 4/211 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
GV+ RKLGMT V++ G +PVTV+ ++ VV RT +++GY A+ +GA K
Sbjct: 1 MVGVIGRKLGMTQVFDANGYVVPVTVIKVEKNTVVDVRTPERHGYRALVLGAFPLKASRA 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
KP G F + PKK L E R + D G F + VDV G++ GKG+
Sbjct: 61 VKPYLGQFQKRGLEPKKVLREIRDFEGD--YKPGDEIGVEIFEGVRFVDVRGLSKGKGYQ 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRH F G A+HG S HR+HGSTG P +V K KMAGRMGG +V V+NL +V
Sbjct: 119 GVMKRHGFSGGPASHG-SKFHRAHGSTGQSAYPSKVLKGTKMAGRMGGVQVCVQNLRIVE 177
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +RG +LV+G VPG +K ++V + K
Sbjct: 178 VDKERGCLLVEGAVPGPRKG-VVIVTRAKKK 207
>gi|15594823|ref|NP_212612.1| 50S ribosomal protein L3 [Borrelia burgdorferi B31]
gi|195941615|ref|ZP_03086997.1| 50S ribosomal protein L3 [Borrelia burgdorferi 80a]
gi|216264833|ref|ZP_03436825.1| ribosomal protein L3 [Borrelia burgdorferi 156a]
gi|218249534|ref|YP_002374988.1| ribosomal protein L3 [Borrelia burgdorferi ZS7]
gi|221218185|ref|ZP_03589651.1| ribosomal protein L3 [Borrelia burgdorferi 72a]
gi|223888933|ref|ZP_03623524.1| ribosomal protein L3 [Borrelia burgdorferi 64b]
gi|224532529|ref|ZP_03673154.1| ribosomal protein L3 [Borrelia burgdorferi WI91-23]
gi|224533652|ref|ZP_03674241.1| ribosomal protein L3 [Borrelia burgdorferi CA-11.2a]
gi|225549667|ref|ZP_03770633.1| ribosomal protein L3 [Borrelia burgdorferi 118a]
gi|226321788|ref|ZP_03797314.1| ribosomal protein L3 [Borrelia burgdorferi Bol26]
gi|226725136|sp|B7J243|RL3_BORBZ RecName: Full=50S ribosomal protein L3
gi|2688413|gb|AAC66864.1| ribosomal protein L3 (rplC) [Borrelia burgdorferi B31]
gi|215981306|gb|EEC22113.1| ribosomal protein L3 [Borrelia burgdorferi 156a]
gi|218164722|gb|ACK74783.1| ribosomal protein L3 [Borrelia burgdorferi ZS7]
gi|221192133|gb|EEE18354.1| ribosomal protein L3 [Borrelia burgdorferi 72a]
gi|223885749|gb|EEF56848.1| ribosomal protein L3 [Borrelia burgdorferi 64b]
gi|224512601|gb|EEF82977.1| ribosomal protein L3 [Borrelia burgdorferi WI91-23]
gi|224513325|gb|EEF83687.1| ribosomal protein L3 [Borrelia burgdorferi CA-11.2a]
gi|225369944|gb|EEG99391.1| ribosomal protein L3 [Borrelia burgdorferi 118a]
gi|226232977|gb|EEH31730.1| ribosomal protein L3 [Borrelia burgdorferi Bol26]
gi|312148184|gb|ADQ30843.1| ribosomal protein L3 [Borrelia burgdorferi JD1]
Length = 206
Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats.
Identities = 90/211 (42%), Positives = 129/211 (61%), Gaps = 6/211 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT ++ G +PVTV+ ++ +T+D++GY A+ G+ + K V
Sbjct: 1 MLGLIGKKVGMTQIFQKNGIVVPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKSSKV 60
Query: 62 SKPMRGFFSS-VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SKP++G + S ++ PK+ + E K D G F + VDVTG T GKGF
Sbjct: 61 SKPIKGQYKSLKDIEPKRYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GAMKRHNF G ++HG S HR G TG P R FK KMAGRMGGN+ T++NLEVV
Sbjct: 118 QGAMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNQQTIQNLEVV 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+D+++ +LVKG VPGA K S+++V+ S K
Sbjct: 177 LIDEEKRALLVKGAVPGA-KGSFVVVKKSKK 206
>gi|189195810|ref|XP_001934243.1| 50S ribosomal protein L3 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187980122|gb|EDU46748.1| 50S ribosomal protein L3 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 332
Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats.
Identities = 95/224 (42%), Positives = 137/224 (61%), Gaps = 5/224 (2%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
+R+G++A K GMT +Y+ G+R TVL +D +VV H+ +KNGY AVQ+GAG+ + +
Sbjct: 84 LRTGLLAIKKGMTSMYDPETGKRAACTVLQVDRNEVVAHKRREKNGYWAVQIGAGQKEAR 143
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVG-SVFSPSYFTVGQLVDVTGMTIGK 118
NV++PM G F++ VSPK+ + EF V+ + L + ++FT GQ VDV G GK
Sbjct: 144 NVTRPMLGHFAAAGVSPKRWVAEFEVRDEAGLQVGIGEMVGANWFTQGQFVDVKGTNKGK 203
Query: 119 GFSGAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
GF+G MKRH FGG A+HG S+ HR + G + RV K+M G MG TVKNL
Sbjct: 204 GFAGGMKRHGFGGQPASHGQSLMHRGMGSAGGSQGSGSRVLPGKRMPGNMGNQSCTVKNL 263
Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
+V+ VD+ G+++V GCVPG + I V D+ KG ++
Sbjct: 264 KVLQVDEANGIVVVGGCVPGP-NDQIIRVSDALGKPWP-KGPMT 305
>gi|71842315|ref|YP_277403.1| ribosomal protein L3 [Emiliania huxleyi]
gi|109893084|sp|Q4G364|RK3_EMIHU RecName: Full=50S ribosomal protein L3, chloroplastic
gi|52547746|gb|AAU81908.1| ribosomal protein L3 [Emiliania huxleyi]
gi|60101558|gb|AAX13902.1| ribosomal protein L3 [Emiliania huxleyi]
Length = 207
Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats.
Identities = 89/211 (42%), Positives = 130/211 (61%), Gaps = 5/211 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M +G+ RK+GMT +++ +G IPVT++ D CQV +T +GY A+QVG E K+
Sbjct: 1 MTAGIFGRKIGMTQIFDKDGSAIPVTLVKADPCQVCQIKTTKTDGYDAIQVGYLEEKLSK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+SKP++G + +K EFRV +D + +G + S F+VGQ V VTG +IGKGF
Sbjct: 61 ISKPIQGHLQKCGSTGYRKFGEFRV-EDPETYNLGDQITTSAFSVGQKVRVTGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G KRHNF THG S +HR GS G PGRV+ KKMAG +G + T+KN E++
Sbjct: 120 AGNQKRHNFSRGPMTHG-SKNHRLPGSIGAGSTPGRVYPGKKMAGHLGNTKTTIKNSEIL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
V +K ++++KG +PG KN ++R + K
Sbjct: 179 FVSEKENILILKGSLPGKAKN---ILRIAAK 206
>gi|149729728|ref|XP_001497211.1| PREDICTED: similar to Mitochondrial ribosomal protein L3 [Equus
caballus]
Length = 348
Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats.
Identities = 74/216 (34%), Positives = 112/216 (51%), Gaps = 5/216 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNG--YMAVQVGAGEAKVK 59
R G++A KLGM ++ +G++ T+L + +C V+ + + + A+ VG
Sbjct: 96 RVGLIALKLGMMPLWTKDGQKHVATLLQVQDCHVLKYTPKENHNGKRAALTVGGKTVSRF 155
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
S + F+ + + PK+K+ F V D+ ++ G+ ++F GQ VDVT TIGKG
Sbjct: 156 RKSTSILEFYQELGLPPKQKVKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGKG 214
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G MKR F G ATHG + +HR G+ D RV+ KM G+MG T L+V
Sbjct: 215 FQGVMKRWGFKGQPATHGQTKTHRRPGAIST-GDVARVWPGTKMPGQMGNIDRTAYGLKV 273
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
++ K +I V G VPG KN + +RDS A
Sbjct: 274 WRINTKHNIIYVNGSVPG-HKNCLVKIRDSKLPAYK 308
>gi|308814220|ref|XP_003084415.1| putative ribosomal protein L3 (ISS) [Ostreococcus tauri]
gi|116056300|emb|CAL56683.1| putative ribosomal protein L3 (ISS) [Ostreococcus tauri]
Length = 312
Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats.
Identities = 98/220 (44%), Positives = 127/220 (57%), Gaps = 3/220 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAVQVGAGEAKVKN 60
R+G + K GMT ++ G R +TV+ LD +VV D NGY AVQ+G G K K
Sbjct: 61 RTGAIGIKCGMTADWDARGCRHALTVVWLDGVEVVRRTGRDGANGYDAVQIGYGARKAKG 120
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V+K G F K+ L EFRV + L G+V + ++F GQ VDV G T GKGF
Sbjct: 121 VTKAELGHFVRHGSGIKRGLKEFRVSRC-GTLTPGTVITAAHFAAGQYVDVGGTTKGKGF 179
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G MKR F G ATHG + HR+HGS G QDPGRVFK KKMAGRMGG R TV++ V
Sbjct: 180 QGPMKRWGFAGQPATHGNTKKHRAHGSIGQCQDPGRVFKGKKMAGRMGGRRRTVQSAYVW 239
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
VD +R L+ +KG +PG + + +RD+ + +V
Sbjct: 240 KVDTERNLLYIKGQIPGGA-GTAVTIRDALRKPPKLGEQV 278
>gi|167972621|ref|ZP_02554898.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 5 str. ATCC
27817]
gi|167988466|ref|ZP_02570137.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 7 str. ATCC
27819]
gi|168362040|ref|ZP_02695219.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 13 str. ATCC
33698]
gi|195867671|ref|ZP_03079673.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 9 str. ATCC
33175]
gi|209553992|ref|YP_002284630.1| 50S ribosomal protein L3 [Ureaplasma urealyticum serovar 10 str.
ATCC 33699]
gi|225550465|ref|ZP_03771414.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 2 str. ATCC
27814]
gi|225551135|ref|ZP_03772081.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 8 str. ATCC
27618]
gi|226730586|sp|B5ZB40|RL3_UREU1 RecName: Full=50S ribosomal protein L3
gi|171903367|gb|EDT49656.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 13 str. ATCC
33698]
gi|184209454|gb|EDU06497.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 5 str. ATCC
27817]
gi|188018930|gb|EDU56970.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 7 str. ATCC
27819]
gi|195660728|gb|EDX53983.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 9 str. ATCC
33175]
gi|209541493|gb|ACI59722.1| 50S ribosomal protein L3 [Ureaplasma urealyticum serovar 10 str.
ATCC 33699]
gi|225378950|gb|EEH01315.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 8 str. ATCC
27618]
gi|225379619|gb|EEH01981.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 2 str. ATCC
27814]
Length = 233
Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats.
Identities = 77/210 (36%), Positives = 114/210 (54%), Gaps = 8/210 (3%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ K+GMT V+ G+ + TV++++ +V+ +T +K+GY A+Q+G K K ++KP
Sbjct: 4 LLGTKVGMTQVFTETGKAVAATVIYVEPNKVLAVKTNEKDGYNAIQIGYETVKEKALNKP 63
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+ G F N PK+ + EFR + VG+ + S F GQLV+ T G GF+G++
Sbjct: 64 LLGQFKKANSDPKRHIKEFRDVVAE----VGAELTVSEFEPGQLVNAQAYTKGHGFTGSI 119
Query: 125 KRHNFGGLRATHGVSISHRSHGST---GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
KRHNF HG HR GS RVFK K+ G G VT KNL V+
Sbjct: 120 KRHNFSMGPMGHGAGYPHRYVGSIAKGRGGSQAQRVFKGTKLPGHYGHELVTTKNLLVLD 179
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
V LIL+KG +PG K S +L++ + K
Sbjct: 180 VKANENLILIKGAIPGP-KGSIVLLKSAKK 208
>gi|237837257|ref|XP_002367926.1| ribosomal protein L3p, putative [Toxoplasma gondii ME49]
gi|211965590|gb|EEB00786.1| ribosomal protein L3p, putative [Toxoplasma gondii ME49]
gi|221509315|gb|EEE34884.1| 50S ribosomal protein L3, putative [Toxoplasma gondii VEG]
Length = 514
Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats.
Identities = 87/209 (41%), Positives = 122/209 (58%), Gaps = 4/209 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+G++A K+GM +++ G R VTV +D C V+ RTLDK+GY A +G G + V
Sbjct: 256 RTGLLAYKIGMMSLWDGWGERHAVTVCQVDRCVVMDQRTLDKDGYEACVMGIGYKPIHKV 315
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KPM G + + PK ++ EF+ D LLPVG S +FT GQ V V+G + KG+
Sbjct: 316 TKPMLGVYIRSQIEPKSRIAEFKCSS-DCLLPVGHEMSVRHFTPGQQVFVSGWSKDKGYL 374
Query: 122 GAMKRHNFGGLRATHGVS-ISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G KR F G A+HGV +H S GS G + V++ KKMAG GG+ V N +V
Sbjct: 375 GVKKRWGFAGQNASHGVEAKAHSSPGSIGQSKTVNVVWRFKKMAGHAGGDPRVV-NCKVF 433
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
++ +R LI +KGCVPG K S I + D+
Sbjct: 434 RIEAQRNLIFLKGCVPG-YKGSLIKISDA 461
>gi|269991357|emb|CAX12541.1| 50S ribosomal protein L3 [Fucus vesiculosus]
Length = 209
Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats.
Identities = 84/211 (39%), Positives = 124/211 (58%), Gaps = 3/211 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+ K+GMT +++ EG +PVTV+ + C + +T NGY AVQ+G + +V
Sbjct: 1 MSIGIFGNKIGMTQIFDKEGLALPVTVIRVGPCFITQLKTEQLNGYSAVQIGYLKRQVLK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++K G + + P L E++V D +G V + YF +GQ V+V+G +IGKGF
Sbjct: 61 LNKAELGHLTKNGLLPLLYLREYKV-PDPTNYSLGQVINVDYFQIGQFVNVSGKSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
SG KRHNF THG S +H++ GS G PGRVF K+MAG++G +VT+ LE++
Sbjct: 120 SGNQKRHNFKRGPMTHG-SKNHKAPGSIGPGTTPGRVFPGKRMAGQLGAKKVTISKLEIL 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+D K L+++KG VPG N + V S K
Sbjct: 179 GIDSKHSLLILKGSVPGKSGN-LLNVSPSDK 208
>gi|121603120|ref|YP_980449.1| 50S ribosomal protein L3 [Polaromonas naphthalenivorans CJ2]
gi|166233174|sp|A1VIQ0|RL3_POLNA RecName: Full=50S ribosomal protein L3
gi|120592089|gb|ABM35528.1| LSU ribosomal protein L3P [Polaromonas naphthalenivorans CJ2]
Length = 226
Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats.
Identities = 85/222 (38%), Positives = 122/222 (54%), Gaps = 3/222 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GM ++ +G +PVTV+ + N +V +T +GY A+QV G K V
Sbjct: 6 SLGLLGRKVGMMRLFTDDGDTVPVTVVDVSNNRVTQVKTEANDGYDALQVAFGSRKASRV 65
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFS--PSYFTVGQLVDVTGMTIGKG 119
+KP G + V + L EFRV D F VGQLVDV G +IGKG
Sbjct: 66 TKPEAGHLAKAGVEAGEILKEFRVTADVAGKYAAGTVVPAADIFAVGQLVDVQGTSIGKG 125
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G +KRH RA+HG S SH GS G QDPGRVF K+M G +G T +NL++
Sbjct: 126 FAGTIKRHKMSSQRASHGNSRSHNVPGSIGMAQDPGRVFPGKRMTGHLGDVTKTTQNLDI 185
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
V +D+ R L++++G VPG+ K ++ VR + K+ +
Sbjct: 186 VRIDEARQLLMIRGAVPGS-KGGFVTVRAAIKAKPTAAKGAN 226
>gi|327540578|gb|EGF27153.1| 50S ribosomal protein L3 [Rhodopirellula baltica WH47]
Length = 217
Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats.
Identities = 77/219 (35%), Positives = 116/219 (52%), Gaps = 23/219 (10%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFS- 70
MT ++ +G +PVTV+ C V+ R+ D++GY AVQ+G + + + RG +
Sbjct: 1 MTQIFLEDGTAVPVTVVQAGPCHVLQVRSKDRDGYEAVQMGFEDKPRRLAKRSERGQVAT 60
Query: 71 ------------------SVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
+ P++ + EFR + + VG + F + VD+T
Sbjct: 61 IESKRSKKRSAAGIEAPAKADCEPQRFVREFRGSSEAN---VGDTLTVEQFNDVKKVDIT 117
Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
G + G+GF+G MKRHNF G RATHGV HR G TG P R FK K+MAG+ G +V
Sbjct: 118 GTSKGRGFAGVMKRHNFAGQRATHGVKKCHRHAGGTGMSASPSRTFKGKRMAGQYGNAKV 177
Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
T +NLEVV VD + L++++G VPG ++ +R + K
Sbjct: 178 TTRNLEVVRVDAENNLLMIRGAVPGP-NGGFVSIRQTNK 215
>gi|221488825|gb|EEE27039.1| 50S ribosomal protein L3, putative [Toxoplasma gondii GT1]
Length = 514
Score = 185 bits (469), Expect = 5e-45, Method: Composition-based stats.
Identities = 87/209 (41%), Positives = 122/209 (58%), Gaps = 4/209 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+G++A K+GM +++ G R VTV +D C V+ RTLDK+GY A +G G + V
Sbjct: 256 RTGLLAYKIGMMSLWDGWGERHAVTVCQVDRCVVMDQRTLDKDGYEACVMGIGYKPIHKV 315
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KPM G + + PK ++ EF+ D LLPVG S +FT GQ V V+G + KG+
Sbjct: 316 TKPMLGVYIRSQIEPKSRIAEFKCSS-DCLLPVGHEMSVRHFTPGQQVFVSGWSKDKGYL 374
Query: 122 GAMKRHNFGGLRATHGVS-ISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G KR F G A+HGV +H S GS G + V++ KKMAG GG+ V N +V
Sbjct: 375 GVKKRWGFAGQNASHGVEAKAHSSPGSIGQSKTVNVVWRFKKMAGHAGGDPRVV-NCKVF 433
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
++ +R LI +KGCVPG K S I + D+
Sbjct: 434 RIEAQRNLIFLKGCVPG-YKGSLIKISDA 461
>gi|294674771|ref|YP_003575387.1| 50S ribosomal protein L3 [Prevotella ruminicola 23]
gi|294472870|gb|ADE82259.1| ribosomal protein L3 [Prevotella ruminicola 23]
Length = 204
Score = 185 bits (469), Expect = 5e-45, Method: Composition-based stats.
Identities = 86/204 (42%), Positives = 119/204 (58%), Gaps = 5/204 (2%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ RK+GMT V++ +G+ +P TV+ C V ++++K+GY AVQ+ GE K KN +K
Sbjct: 3 GLIGRKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKSVEKDGYEAVQLAFGEKKEKNTTK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
M G F N +PK L EF K D L +G + F + VDV G + GKGF G
Sbjct: 63 AMMGIFKKANTTPKAHLAEF---KFDTELNLGDTVTVDIFEGAEFVDVVGTSKGKGFQGV 119
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G +ATHG R GS G P +VFK +M G+MGG+RVT +NL+V+ V
Sbjct: 120 VKRHGFGGVGQATHGQDDRLRKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLKVLKV 179
Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
+ LILVKG G S +L+
Sbjct: 180 IPEHNLILVKGSCAG-YNGSTVLI 202
>gi|325972661|ref|YP_004248852.1| 50S ribosomal protein L3 [Spirochaeta sp. Buddy]
gi|324027899|gb|ADY14658.1| 50S ribosomal protein L3 [Spirochaeta sp. Buddy]
Length = 206
Score = 185 bits (469), Expect = 5e-45, Method: Composition-based stats.
Identities = 85/211 (40%), Positives = 123/211 (58%), Gaps = 5/211 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT V++ +GR PVTV+ ++ VV RT +K+GY A +G+ + K +
Sbjct: 1 MLGLIGKKVGMTQVFDAQGRLTPVTVIKIEGNVVVGERTDEKHGYSAAVLGSVDKKKSTI 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V K + K+ L VG V F VDVTG T GKG++
Sbjct: 61 TKPYAGQFTDVCEPKKHVIEFRDFDKE---LTVGEVLGVDIFKDATFVDVTGTTKGKGYA 117
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRH F G RATHG S HR G T P R FK +MAG MG R+TV+NL+VV
Sbjct: 118 GGIKRHGFSGGRATHG-SKFHRDIGGTAMSSTPARTFKGHRMAGHMGNERMTVQNLKVVR 176
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD++ +++VKG +PG + S ++V+ + K
Sbjct: 177 VDEEMQVLMVKGAIPGPAQ-SVVIVKKAIKK 206
>gi|187918344|ref|YP_001883907.1| 50S ribosomal protein L3 [Borrelia hermsii DAH]
gi|226725138|sp|B2S0I1|RL3_BORHD RecName: Full=50S ribosomal protein L3
gi|119861192|gb|AAX16987.1| LSU ribosomal protein L3P [Borrelia hermsii DAH]
Length = 209
Score = 184 bits (468), Expect = 5e-45, Method: Composition-based stats.
Identities = 88/214 (41%), Positives = 131/214 (61%), Gaps = 6/214 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT V+ G +PVTV+ + ++ +T++++GY A+ +G+ + K +
Sbjct: 1 MLGLIGKKVGMTQVFQGNGVVVPVTVIEFEPNYIIGKKTVERDGYDALIMGSVDLKSSKI 60
Query: 62 SKPMRGFFSSVNV-SPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SKP++G + ++ PKK + EF+ K G F + VD+TG T GKGF
Sbjct: 61 SKPIKGQYKNLENVEPKKYVIEFKGLKG---YDAGDEVGLDAFKEIKYVDITGTTKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GAMKRHNF G ++HG S HR GSTG P R FK KMAGRMGG + T++NLEVV
Sbjct: 118 QGAMKRHNFSGGPSSHG-SKFHRHLGSTGQAATPSRTFKGTKMAGRMGGEQQTIQNLEVV 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
+D+++ ILVKG VPG K S+++V+ + K V
Sbjct: 177 FIDEEKRAILVKGAVPG-VKGSFVIVKKAKKVGV 209
>gi|225548727|ref|ZP_03769774.1| ribosomal protein L3 [Borrelia burgdorferi 94a]
gi|225370757|gb|EEH00193.1| ribosomal protein L3 [Borrelia burgdorferi 94a]
Length = 206
Score = 184 bits (468), Expect = 6e-45, Method: Composition-based stats.
Identities = 90/211 (42%), Positives = 129/211 (61%), Gaps = 6/211 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT ++ G +PVTV+ ++ +T+D++GY A+ G+ + K V
Sbjct: 1 MLGLIGKKVGMTQIFQKNGIVVPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKSSKV 60
Query: 62 SKPMRGFFSS-VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SKP++G + S ++ PK+ + E K D G F + VDVTG T GKGF
Sbjct: 61 SKPIKGQYKSLKDIEPKRCVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GAMKRHNF G ++HG S HR G TG P R FK KMAGRMGGN+ T++NLEVV
Sbjct: 118 QGAMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNQQTIQNLEVV 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+D+++ +LVKG VPGA K S+++V+ S K
Sbjct: 177 LIDEEKRALLVKGAVPGA-KGSFVVVKKSKK 206
>gi|242624269|ref|YP_003002187.1| 50S ribosomal protein L3 [Aureoumbra lagunensis]
gi|239997377|gb|ACS36899.1| 50S ribosomal protein L3 [Aureoumbra lagunensis]
Length = 208
Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats.
Identities = 85/201 (42%), Positives = 118/201 (58%), Gaps = 2/201 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ K+GMT + + G +PVT+L C V +T++ +GY AVQVG + K
Sbjct: 1 MPLGLLGNKIGMTQIVDERGNMVPVTILRAGPCIVTQIKTVEVDGYEAVQVGYNQVSSKF 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP G V V + L E+R+ + + +G S F G LVD+TG TIGKGF
Sbjct: 61 LTKPQIGHLEKVGVPLLRYLHEYRIDSTE-QVTLGQTISVDMFKSGDLVDITGKTIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G KRHNFG THG S +HR+ GS G PGRV+ KKMAG +G +VT+K L+++
Sbjct: 120 AGLQKRHNFGRGPMTHG-SKNHRAPGSIGAGTTPGRVYPGKKMAGHLGAKKVTIKKLKIL 178
Query: 181 SVDDKRGLILVKGCVPGAKKN 201
VD + LI+V G VPG N
Sbjct: 179 FVDAENNLIVVLGSVPGKSGN 199
>gi|44209|emb|CAA29704.1| unnamed protein product [Mycoplasma capricolum subsp. capricolum
ATCC 27343]
Length = 223
Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats.
Identities = 78/217 (35%), Positives = 127/217 (58%), Gaps = 6/217 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+ MT V+ G+ +PVTV+ + V+ +T+D +GY+AVQ+G + +V V
Sbjct: 1 MKGILGRKVEMTQVFTNSGQLVPVTVVEVLPNTVLQVKTIDSDGYVAVQLGTTDKRVNLV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F N +PK+ + E R + + + F G+ VDVTG++ GKGF+
Sbjct: 61 NKPELGHFKKANSNPKRFVKEIRNMQGYE--IGQVINVSDIFVSGEYVDVTGISKGKGFA 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRHN+ HG S HR GS G R+FK+KKM G MG + T++NLE+++
Sbjct: 119 GGIKRHNYSRGPMAHG-SGYHRGIGSMGAI--INRIFKSKKMPGHMGNAKRTIQNLEIIA 175
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+D ++L+KG +PG KNS++ ++ + K + +
Sbjct: 176 IDQSNNIMLIKGPIPGP-KNSFVQIKQNVKGMSSKQA 211
>gi|62857890|ref|NP_001016594.1| mitochondrial ribosomal protein L3 [Xenopus (Silurana) tropicalis]
gi|89272068|emb|CAJ81305.1| mitochondrial ribosomal protein L3 [Xenopus (Silurana) tropicalis]
gi|134024406|gb|AAI35276.1| mitochondrial ribosomal protein L3 [Xenopus (Silurana) tropicalis]
Length = 341
Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats.
Identities = 77/211 (36%), Positives = 108/211 (51%), Gaps = 5/211 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAV-QVGAGEAKVK 59
R GV+A KLGM ++ G R VT+L + +C VV + ++ +G A VG
Sbjct: 91 RVGVIAVKLGMMPIWTKSGDRHAVTMLQVRDCHVVKYTPKEEFDGKTASLTVGGKNVSPF 150
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+ + V PK+K+ F+V D+ +L G+ ++F GQ VD+T TIGKG
Sbjct: 151 YKPESAMELYREAGVPPKQKISIFKVS-DNAILKPGTPLYAAHFRPGQFVDITAKTIGKG 209
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G MKR + G A+HG + +HR G+ DP RVF KM GRMG T L+V
Sbjct: 210 FQGVMKRWGYKGQPASHGQTKTHRRPGAIS-SGDPARVFPGTKMPGRMGNVYRTSYALKV 268
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
V+ K +I V G VPG N + V D+
Sbjct: 269 WRVNTKHNIIYVNGSVPG-HTNCLVKVTDTK 298
>gi|282881000|ref|ZP_06289691.1| 50S ribosomal protein L3 [Prevotella timonensis CRIS 5C-B1]
gi|281305223|gb|EFA97292.1| 50S ribosomal protein L3 [Prevotella timonensis CRIS 5C-B1]
Length = 204
Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats.
Identities = 85/204 (41%), Positives = 122/204 (59%), Gaps = 5/204 (2%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ RK+GMT V++ +G+ IP TV+ C V +T++K+GY AVQ+G GEAK K SK
Sbjct: 3 GLIGRKIGMTSVFSADGKNIPCTVIEAGPCVVTQLKTVEKDGYKAVQLGFGEAKEKRTSK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P+ G F +PKK L EF K ++ +G + F+ VDV G++ GKGF G
Sbjct: 63 PLMGTFKKAGTTPKKHLAEF---KFEEEYNLGDTITVDLFSNADFVDVVGVSKGKGFQGV 119
Query: 124 MKRHNF-GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F G ++THG R GS G P +VFK +M G+MGG+RVT +NL V+ V
Sbjct: 120 VKRHGFGGVGQSTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVTTQNLRVLKV 179
Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
++ L++VKG G S +L+
Sbjct: 180 IPEQNLLIVKGSFAGF-NGSTVLI 202
>gi|240047259|ref|YP_002960647.1| 50S ribosomal protein L3 [Mycoplasma conjunctivae HRC/581]
gi|239984831|emb|CAT04821.1| 50S ribosomal protein L3 [Mycoplasma conjunctivae]
Length = 225
Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats.
Identities = 75/219 (34%), Positives = 117/219 (53%), Gaps = 6/219 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT ++ G IPVTV+ + V T +KN Y A+Q+ + K
Sbjct: 1 MKGILGKKVGMTQLFTDHGIAIPVTVIEVQPNIVTNVLTQEKNSYDAIQLSVFDKKASRF 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F N +PKK + EFR + D G V S F G+ VDV G + GKGF+
Sbjct: 61 NKPELGHFQKANTTPKKFVKEFR---NFDGYKSGDVVDLSIFEAGEFVDVVGTSKGKGFA 117
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP--GRVFKNKKMAGRMGGNRVTVKNLEV 179
G +KR+N +HG + TG D +V K M G +G RVT++NLE+
Sbjct: 118 GTIKRYNQAIGPRSHGGGGGSKPIRQTGSIGDISGNKVVKGMTMPGHLGHERVTLQNLEI 177
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+ VD + +++VKG +PG KK S+++++ + K + +
Sbjct: 178 IKVDVENSILVVKGSIPGPKK-SFVIIKSASKRSDKKEA 215
>gi|225552448|ref|ZP_03773388.1| ribosomal protein L3 [Borrelia sp. SV1]
gi|225371446|gb|EEH00876.1| ribosomal protein L3 [Borrelia sp. SV1]
Length = 206
Score = 184 bits (467), Expect = 8e-45, Method: Composition-based stats.
Identities = 89/211 (42%), Positives = 128/211 (60%), Gaps = 6/211 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT ++ G +PVTV+ ++ +T+D++GY A+ G+ + K V
Sbjct: 1 MLGLIGKKVGMTQIFQKNGIVVPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKSSKV 60
Query: 62 SKPMRGFFSS-VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SKP++G + ++ PK+ + E K D G F + VDVTG T GKGF
Sbjct: 61 SKPIKGQYKGLKDIEPKRYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GAMKRHNF G ++HG S HR G TG P R FK KMAGRMGGN+ T++NLEVV
Sbjct: 118 QGAMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNQQTIQNLEVV 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+D+++ +LVKG VPGA K S+++V+ S K
Sbjct: 177 LIDEEKRALLVKGAVPGA-KGSFVVVKKSKK 206
>gi|304373190|ref|YP_003856399.1| 50S ribosomal protein L3 [Mycoplasma hyorhinis HUB-1]
gi|304309381|gb|ADM21861.1| 50S ribosomal protein L3 [Mycoplasma hyorhinis HUB-1]
gi|330723950|gb|AEC46320.1| 50S ribosomal protein L3 [Mycoplasma hyorhinis MCLD]
Length = 231
Score = 184 bits (466), Expect = 9e-45, Method: Composition-based stats.
Identities = 77/221 (34%), Positives = 119/221 (53%), Gaps = 7/221 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT ++ EG IPVTV+ + V T DKNGY A+Q+ A + K
Sbjct: 1 MKGILGKKVGMTQLFTEEGISIPVTVVEVQPNVVTNVLTKDKNGYEAIQLAAFDKKKSRF 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F + PK+ + EFR + + +G S F G+ VDV G + GKGF+
Sbjct: 61 TKPELGHFKKADTEPKRFVKEFRNMQAE----LGQKVDLSIFEEGEFVDVVGTSKGKGFA 116
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP--GRVFKNKKMAGRMGGNRVTVKNLEV 179
G +KR+N +HG + TG D +V K M G +G R TV+NLE+
Sbjct: 117 GTIKRYNQHIGPKSHGGGGGSKPIRQTGSIGDISGNKVVKGMTMPGHLGHERTTVQNLEI 176
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
+ +D ++++KG VPG KK S++++++S K A +V
Sbjct: 177 IKIDLTNNILVIKGSVPGPKK-SFLVIKESVKQAPKKAAEV 216
>gi|257456892|ref|ZP_05622073.1| 50S ribosomal protein L3 [Treponema vincentii ATCC 35580]
gi|257445601|gb|EEV20663.1| 50S ribosomal protein L3 [Treponema vincentii ATCC 35580]
Length = 208
Score = 184 bits (466), Expect = 9e-45, Method: Composition-based stats.
Identities = 81/211 (38%), Positives = 116/211 (54%), Gaps = 5/211 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT +++ EGR PVTVL + VV + D GY AV +G GE K V
Sbjct: 1 MVGLIGKKIGMTQLFDEEGRLTPVTVLQVVPNTVVAVKDADHFGYEAVVLGTGELKEGRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SK F+ + K+ VG+ + +D+T ++ GKGF
Sbjct: 61 SKVYANQFAEGVAPVRLLKEFRGFDKEVA---VGAKIGVEVLESVRYLDITAISKGKGFQ 117
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR FGG RA+HG S HR GSTG PGR FKN KM G MG RVTV+NL +
Sbjct: 118 GVVKRWGFGGGRASHG-SKFHREAGSTGQCTSPGRSFKNVKMPGHMGAERVTVQNLRIEK 176
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+D + G+++V+G VPG KK++ + ++ + K
Sbjct: 177 IDPELGVVMVRGSVPG-KKDAVVFLKSAVKR 206
>gi|254674251|emb|CBA10035.1| 50S ribosomal protein L3 [Neisseria meningitidis alpha275]
Length = 196
Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 90/193 (46%), Positives = 118/193 (61%), Gaps = 2/193 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V RK+GMT V++ +G +PVTVL + +V ++ D +GY AVQV G+ K
Sbjct: 1 MTLGLVGRKVGMTRVFDEQGVSVPVTVLDMSANRVTQVKSKDTDGYTAVQVTFGQKKANR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V+K G F+ V + L EF + ++ L G + S F VGQLVDVTG + GKG
Sbjct: 61 VNKAEAGHFAKAGVEAGRGLIEFALTEEKLAELKAGDEITVSMFEVGQLVDVTGTSKGKG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
FSG +KRHNFG R +HG S SHR GS G QDPGRVF K+MAG+ G + K L+V
Sbjct: 121 FSGTIKRHNFGAQRTSHGNSRSHRVPGSIGMAQDPGRVFPGKRMAGQYGTPKHCSK-LKV 179
Query: 180 VSVDDKRGLILVK 192
V VD +R L+ VK
Sbjct: 180 VRVDAERQLLWVK 192
>gi|172056140|ref|YP_001812600.1| 50S ribosomal protein L3 [Exiguobacterium sibiricum 255-15]
gi|226725176|sp|B1YGV0|RL3_EXIS2 RecName: Full=50S ribosomal protein L3
gi|171988661|gb|ACB59583.1| ribosomal protein L3 [Exiguobacterium sibiricum 255-15]
Length = 208
Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 91/212 (42%), Positives = 131/212 (61%), Gaps = 5/212 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ KLGMT ++N G +PVTV+ ++ V+ +T++ +GY AVQ+G G+ K
Sbjct: 1 MAKGILGTKLGMTQIFNESGEVVPVTVVSVEGNVVLQLKTMEVDGYEAVQLGFGDIKEGR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + + +PK+ + E R D +G F G++VDVTG + GKGF
Sbjct: 61 QNKPQKGHAAKASATPKRFIKEIRTSVTD--FEIGQEIKADTFAAGEMVDVTGTSKGKGF 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+GA+KRHN HG S HR GS G P RVFK K + GRMGG +VTV+NLE+V
Sbjct: 119 AGAIKRHNQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKGKLLPGRMGGEQVTVQNLEIV 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD +RGL+LVKG +PGA+K S ++V+ + K
Sbjct: 177 KVDVERGLLLVKGAIPGARK-SQVVVKTAVKG 207
>gi|3915827|sp|P94267|RL3_BORBU RecName: Full=50S ribosomal protein L3
Length = 206
Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 89/211 (42%), Positives = 128/211 (60%), Gaps = 6/211 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT ++ G +PVTV+ ++ +T+D++GY A+ G+ + K V
Sbjct: 1 MLGLIGKKVGMTQIFQKNGIVVPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKSSKV 60
Query: 62 SKPMRGFFSS-VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SKP++G + S ++ PK+ + E K D G F + VDVTG T GKGF
Sbjct: 61 SKPIKGQYKSLKDIEPKRYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GAMKRHNF G ++HG S HR G TG P R FK KMAGRM GN+ T++NLEVV
Sbjct: 118 QGAMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMAGNQQTIQNLEVV 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+D+++ +LVKG VPGA K S+++V+ S K
Sbjct: 177 LIDEEKRALLVKGAVPGA-KGSFVVVKKSKK 206
>gi|312212003|emb|CBX92087.1| similar to 50S ribosomal protein L3 [Leptosphaeria maculans]
Length = 328
Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 104/219 (47%), Positives = 138/219 (63%), Gaps = 4/219 (1%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
+R+G++A K GMT +Y+ G+R TVL LD +V+ H+ DKNGY AVQVGAGE K
Sbjct: 82 LRTGLLANKKGMTAMYDPETGKRTACTVLQLDRNEVIAHKRRDKNGYWAVQVGAGEKLPK 141
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL-LPVGSVFSPSYFTVGQLVDVTGMTIGK 118
NV+KPM G F+ VSPK+ + EF+V+ + L +PVGS+ +F VGQ VDV G++ G
Sbjct: 142 NVTKPMLGHFAGAAVSPKRWVAEFKVRDEAGLGVPVGSMVGAGWFNVGQWVDVKGISRGM 201
Query: 119 GFSGAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
GF+G MKRH FGG A+HG S+ HR + G + RV K+MAG MG VTVKNL
Sbjct: 202 GFAGGMKRHGFGGQPASHGQSLMHRGMGSAGGSQGSGSRVLPGKRMAGNMGNESVTVKNL 261
Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
+V+ VD G+++V G VPG KN I V D+
Sbjct: 262 KVLQVDAANGILVVTGAVPGP-KNQIIRVSDARDKPWPA 299
>gi|225706142|gb|ACO08917.1| Mitochondrial 39S ribosomal protein L3 [Osmerus mordax]
Length = 345
Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 83/211 (39%), Positives = 118/211 (55%), Gaps = 4/211 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAVQVGAG-EAKVK 59
R G+VA KLGM V+ G R VT+L + +C V+ H T ++ +G+ A V G A
Sbjct: 93 RVGLVAVKLGMAPVWTKSGERHVVTMLQVQDCHVLKHLTKEEYDGHTAALVVGGRNASPF 152
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
++ F V PK+K+ F+V D+ ++ G+ ++F GQ VDVT TIGKG
Sbjct: 153 YKTEENMEMFRIAGVPPKQKVTTFKVS-DNAIIKPGTPLHAAHFRPGQYVDVTAKTIGKG 211
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G MKR+ F G A+HG + +HR G++G DP +VFK KKM G MG T L+V
Sbjct: 212 FQGVMKRYGFKGQPASHGQTKTHRRPGASGPGGDPAKVFKGKKMPGIMGNIYDTATGLKV 271
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
++ K ++ V G VPG KN + VRD+
Sbjct: 272 WRINTKHNVLYVHGSVPG-HKNCLVKVRDTV 301
>gi|51598732|ref|YP_072920.1| 50S ribosomal protein L3 [Borrelia garinii PBi]
gi|81825630|sp|Q661E3|RL3_BORGA RecName: Full=50S ribosomal protein L3
gi|51573303|gb|AAU07328.1| ribosomal protein L3 [Borrelia garinii PBi]
Length = 206
Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 93/211 (44%), Positives = 128/211 (60%), Gaps = 6/211 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT ++ G IPVTV+ ++ +T+D++GY A+ G+ + K V
Sbjct: 1 MLGLIGKKVGMTQIFQKNGIVIPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKGSKV 60
Query: 62 SKPMRGFFSS-VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SKP++G + S ++ PKK + E K D G F + VDVTG T GKGF
Sbjct: 61 SKPIKGQYKSLKDIEPKKYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GAMKRHNF G ++HG S HR G TG P R FK KMAGRMGGN+ T++NLEVV
Sbjct: 118 QGAMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNKQTIQNLEVV 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+D++ ILVKG VPGA K S+++V+ S K
Sbjct: 177 LIDEENRAILVKGAVPGA-KGSFVVVKKSKK 206
>gi|71893546|ref|YP_278992.1| 50S ribosomal protein L3 [Mycoplasma hyopneumoniae J]
gi|109893526|sp|Q4AAE0|RL3_MYCHJ RecName: Full=50S ribosomal protein L3
gi|71851673|gb|AAZ44281.1| 50S ribosomal protein L3 [Mycoplasma hyopneumoniae J]
Length = 230
Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 77/222 (34%), Positives = 121/222 (54%), Gaps = 7/222 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GM+ ++ EG IPV+++ + V T +KN Y A+Q+ A + K
Sbjct: 1 MKGILGKKVGMSQLFTTEGIAIPVSIIEVPENIVTKIITKEKNSYDAIQLAAFDKKQSRF 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
KP G F+ N PK+ + EFR D +G S F+ G+ VDVTG + GKGF+
Sbjct: 61 LKPEIGHFAKANTKPKRFIKEFR---DFQGYKLGQTVDVSIFSPGEFVDVTGTSKGKGFA 117
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP--GRVFKNKKMAGRMGGNRVTVKNLEV 179
G +KR+N +HG + TG D +V K M GR+G +VT ++LE+
Sbjct: 118 GTIKRYNQAIGPRSHGGGGGSKPIRQTGSLGDISGNKVVKGMTMPGRLGHEKVTKQSLEI 177
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
+ VD + L+++KG VPG KK S+++++ + K N K VS
Sbjct: 178 IKVDKENNLLVLKGSVPGPKK-SFLVIKSAIKKP-NPKNPVS 217
>gi|147799626|emb|CAN75145.1| hypothetical protein VITISV_033846 [Vitis vinifera]
Length = 243
Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 97/192 (50%), Positives = 128/192 (66%), Gaps = 1/192 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+G +A K GM+ +++ G R+P+TVL LD+ V +T +K G A+QVG G+ K K++
Sbjct: 7 RTGAIAVKCGMSALWDKWGARVPITVLWLDDNIVSQVKTFEKEGXNALQVGCGQKKAKHL 66
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F + V K+KL EF V + D LLPVG+ +F GQ VDVTG+T GKGF
Sbjct: 67 TKPEVGHFRAQGVPLKRKLREFPVTE-DALLPVGTTIGVRHFVPGQYVDVTGITRGKGFQ 125
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR F G+ A+HG S+SHRS GSTG R PG+VFK KKM GRMGG + TVKN+ V
Sbjct: 126 GGMKRWGFKGMPASHGASLSHRSIGSTGQRDAPGKVFKGKKMPGRMGGKQRTVKNVWVYK 185
Query: 182 VDDKRGLILVKG 193
+D R L+ V+G
Sbjct: 186 IDPTRNLMWVRG 197
>gi|330837655|ref|YP_004412296.1| 50S ribosomal protein L3P [Spirochaeta coccoides DSM 17374]
gi|329749558|gb|AEC02914.1| LSU ribosomal protein L3P [Spirochaeta coccoides DSM 17374]
Length = 206
Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 87/211 (41%), Positives = 116/211 (54%), Gaps = 5/211 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT V++ EGR PVTV+ ++ VV RT +KNGY A +GA + K V
Sbjct: 1 MLGLIGKKIGMTQVFDAEGRLTPVTVIKIEGNVVVADRTEEKNGYNAALLGAIDKKKSRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F K + D + VG V F VDVTG T GKGF
Sbjct: 61 TKPYAGQFPE---GVAVKRNLVEFRDFDKEVSVGEVLGVDLFKDIAFVDVTGTTKGKGFQ 117
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRH F G RA+HG S HR G T P FK +MAG MG R TV+NL VV
Sbjct: 118 GGMKRHGFAGGRASHG-SKFHRDIGGTAMSTTPAHTFKGHRMAGHMGFERTTVQNLRVVR 176
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD++ +++VKG +PG + S ++V+ + K
Sbjct: 177 VDEELQVLMVKGAIPGPAQ-SVVIVKKAVKR 206
>gi|224531994|ref|ZP_03672626.1| ribosomal protein L3 [Borrelia valaisiana VS116]
gi|224511459|gb|EEF81865.1| ribosomal protein L3 [Borrelia valaisiana VS116]
Length = 206
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 94/211 (44%), Positives = 129/211 (61%), Gaps = 6/211 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT V+ G +PVTV+ ++ +T+D++GY A+ G+ + K V
Sbjct: 1 MLGLIGKKVGMTQVFQKNGIVVPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKGSKV 60
Query: 62 SKPMRGFFSS-VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SKP++G + S ++ PKK + E K D G F + VDVTG T GKGF
Sbjct: 61 SKPIKGQYKSLKDIEPKKYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GAMKRHNF G ++HG S HR G TG P R FK KMAGRMGGN+ T++NLEVV
Sbjct: 118 QGAMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNQQTIQNLEVV 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+D++R ILVKG VPGA K S+++V+ S K
Sbjct: 177 LIDEERRAILVKGAVPGA-KGSFVVVKKSKK 206
>gi|72080533|ref|YP_287591.1| 50S ribosomal protein L3 [Mycoplasma hyopneumoniae 7448]
gi|109893525|sp|Q4A8H1|RL3_MYCH7 RecName: Full=50S ribosomal protein L3
gi|71913657|gb|AAZ53568.1| 50S ribosomal protein L3 [Mycoplasma hyopneumoniae 7448]
Length = 230
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 77/222 (34%), Positives = 121/222 (54%), Gaps = 7/222 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GM+ ++ EG IPV+++ + V T +KN Y A+Q+ A + K
Sbjct: 1 MKGILGKKVGMSQLFTTEGIAIPVSIIEVPENIVTKIITKEKNSYNAIQLAAFDKKQSRF 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
KP G F+ N PK+ + EFR D +G S F+ G+ VDVTG + GKGF+
Sbjct: 61 LKPEIGHFAKANTKPKRFIKEFR---DFQGYKLGQTVDVSIFSPGEFVDVTGTSKGKGFA 117
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP--GRVFKNKKMAGRMGGNRVTVKNLEV 179
G +KR+N +HG + TG D +V K M GR+G +VT ++LE+
Sbjct: 118 GTIKRYNQAIGPRSHGGGGGSKPIRQTGSLGDISGNKVVKGMTMPGRLGHEKVTKQSLEI 177
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
+ VD + L+++KG VPG KK S+++++ + K N K VS
Sbjct: 178 IKVDKENNLLVLKGSVPGPKK-SFLVIKSAIKKP-NPKNPVS 217
>gi|46109318|ref|XP_381717.1| hypothetical protein FG01541.1 [Gibberella zeae PH-1]
Length = 332
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 100/219 (45%), Positives = 140/219 (63%), Gaps = 5/219 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGR-RIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
+RSGV+A K GMT ++ G+ R+P TVL LD QVV ++T +KNGY AVQ+G G +
Sbjct: 75 LRSGVLAVKKGMTSMFV--GKIRVPCTVLQLDQVQVVANKTREKNGYWAVQIGQGSRDGR 132
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
NV+ P+ G++ + ++PK +L EF+V+ D LLPVG P +F GQ VDV G + G G
Sbjct: 133 NVTSPLLGYYEAKGIAPKAELAEFKVRDKDGLLPVGVQILPDWFKKGQYVDVKGRSRGMG 192
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP-GRVFKNKKMAGRMGGNRVTVKNLE 178
F+G MKRH F G A+HG S +HR+ G+TG Q RV KKM GRMG VTV+NL+
Sbjct: 193 FAGGMKRHGFSGQEASHGNSKNHRTIGTTGPSQGSGSRVMPGKKMPGRMGNEFVTVQNLK 252
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
V+ VD++ G++LV G + G K + ++DS K +
Sbjct: 253 VMMVDNELGIVLVGGPIAGP-KGRVVRLQDSKKRKAPPQ 290
>gi|189218695|ref|YP_001939336.1| Ribosomal protein L3 [Methylacidiphilum infernorum V4]
gi|189185553|gb|ACD82738.1| Ribosomal protein L3 [Methylacidiphilum infernorum V4]
Length = 221
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 83/211 (39%), Positives = 129/211 (61%), Gaps = 3/211 (1%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ARK+GMT +++ G P+TVL + VV + + + +QVG + +SK
Sbjct: 14 GIMARKIGMTQLFDATGTMHPLTVLVAEPNVVVQCKKEGEGKEVRLQVGYEALPERKLSK 73
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P+ G + +SP++ L EF V + ++ G + S F G+ VDV G+T GKGF G
Sbjct: 74 PLLGHYKKSGISPRRHLKEF-VFESEESWQPGQLLDVSRFNEGEKVDVIGITKGKGFQGV 132
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
+K+H FGG A+HG S +HR +G+ G R PGRVFKN+ M G MG +VT++NL++ +
Sbjct: 133 IKKHGFGGQPASHG-SKTHRRNGAIGERSFPGRVFKNQGMPGHMGRKKVTIQNLDLFKII 191
Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
+ ++LVKG VPGA K ++VR + K++V
Sbjct: 192 PEDNVLLVKGSVPGA-KGDMVIVRKAIKASV 221
>gi|122692439|ref|NP_001073786.1| 39S ribosomal protein L3, mitochondrial [Bos taurus]
gi|88932613|sp|Q3ZBX6|RM03_BOVIN RecName: Full=39S ribosomal protein L3, mitochondrial; Short=L3mt;
Short=MRP-L3
gi|73586745|gb|AAI03048.1| Mitochondrial ribosomal protein L3 [Bos taurus]
gi|296490939|gb|DAA33052.1| 39S ribosomal protein L3, mitochondrial [Bos taurus]
Length = 348
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 73/216 (33%), Positives = 114/216 (52%), Gaps = 5/216 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNG--YMAVQVGAGEAKVK 59
R G+VA KLGM ++ +G++ VT+L + +C V+ + + + A+ VG
Sbjct: 96 RVGLVALKLGMMPLWTKDGKKHVVTLLQVQDCHVLKYTPKENHNGKMAALTVGGKTVSRF 155
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+ S + F+ + + PK+K+ F V D+ ++ G+ ++F GQ VDVT TIGKG
Sbjct: 156 HKSTSILEFYQELGLPPKQKIKMFNVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGKG 214
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G MKR F G ATHG + +HR G+ D RV+ KM G++G T L+V
Sbjct: 215 FQGVMKRWGFKGQPATHGQTKTHRRPGAIST-GDVARVWPGTKMPGQLGNVDRTAFGLKV 273
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
++ K +I V G VPG +N + ++DS A
Sbjct: 274 WRINTKHNIIYVNGSVPG-HRNCLVKIKDSVLPAYK 308
>gi|312601074|gb|ADQ90329.1| 50S ribosomal protein L3 [Mycoplasma hyopneumoniae 168]
Length = 230
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 77/222 (34%), Positives = 121/222 (54%), Gaps = 7/222 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GM+ ++ EG IPV+++ + V T +KN Y A+Q+ A + K
Sbjct: 1 MKGILGKKVGMSQLFTTEGIAIPVSIIEVPENIVTKIITKEKNSYDAIQLAAFDKKQSRF 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
KP G F+ N PK+ + EFR D +G S F+ G+ VDVTG + GKGF+
Sbjct: 61 LKPEIGHFAKANTKPKRFIKEFR---DFQGYKLGQTVDVSIFSPGEFVDVTGTSKGKGFA 117
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP--GRVFKNKKMAGRMGGNRVTVKNLEV 179
G +KR+N +HG + TG D +V K M GR+G +VT ++LE+
Sbjct: 118 GTIKRYNQAIGPRSHGGGGGSKPIRQTGSLGDISGNKVVKGMTMPGRLGHEKVTKQSLEI 177
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
+ VD + L+++KG VPG KK S+++++ + K N K VS
Sbjct: 178 IKVDKENNLLVLKGSVPGPKK-SFLVIKSAIKKP-NPKNPVS 217
>gi|219684396|ref|ZP_03539340.1| ribosomal protein L3 [Borrelia garinii PBr]
gi|219672385|gb|EED29438.1| ribosomal protein L3 [Borrelia garinii PBr]
Length = 206
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 92/211 (43%), Positives = 128/211 (60%), Gaps = 6/211 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT ++ G IPVTV+ ++ +T+D++GY A+ G+ + K V
Sbjct: 1 MLGLIGKKVGMTQIFQKNGIVIPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKGSKV 60
Query: 62 SKPMRGFFSS-VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SKP++G + S ++ P+K + E K D G F + VDVTG T GKGF
Sbjct: 61 SKPIKGQYKSLKDIEPQKYVIEL---KGLDGYDPGDEIKVDVFKSVKYVDVTGTTKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GAMKRHNF G ++HG S HR G TG P R FK KMAGRMGGN+ T++NLEVV
Sbjct: 118 QGAMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNKQTIQNLEVV 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+D++ ILVKG VPGA K S+++V+ S K
Sbjct: 177 LIDEENRAILVKGAVPGA-KGSFVVVKKSKK 206
>gi|216263354|ref|ZP_03435349.1| ribosomal protein L3 [Borrelia afzelii ACA-1]
gi|215980198|gb|EEC21019.1| ribosomal protein L3 [Borrelia afzelii ACA-1]
Length = 206
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 92/211 (43%), Positives = 129/211 (61%), Gaps = 6/211 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT ++ G +PVTV+ ++ +T+D++GY A+ G+ + K V
Sbjct: 1 MLGLIGKKVGMTQIFQKNGIVVPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKGSKV 60
Query: 62 SKPMRGFFSS-VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SKP++G + S ++ PKK + E K D G F + VDVTG T GKGF
Sbjct: 61 SKPIKGQYKSLKDIEPKKYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GAMKRHNF G ++HG S HR G TG P R FK KMAGRMGGN+ T++NLEVV
Sbjct: 118 QGAMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNQQTIQNLEVV 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+D+++ ILVKG VPGA K S+++V+ S K
Sbjct: 177 LIDEEKRAILVKGAVPGA-KGSFVVVKKSKK 206
>gi|81859531|sp|Q5HDV8|RL3_STAAC RecName: Full=50S ribosomal protein L3
gi|57285020|gb|AAW37114.1| ribosomal protein L3 [Staphylococcus aureus subsp. aureus COL]
gi|323442744|gb|EGB00370.1| 50S ribosomal protein L3 [Staphylococcus aureus O46]
Length = 209
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 89/212 (41%), Positives = 116/212 (54%), Gaps = 11/212 (5%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEA--------KVKNVSK 63
MT V+ G IPVTV+ V+ +T++ +GY A+QVG + K +K
Sbjct: 1 MTQVFGENGELIPVTVVEAKENVVLQKKTVEVDGYNAIQVGFEDKKAYKKDAKSNKYANK 60
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P G + +PK+ + EFR D VG S F G ++DVTG++ GKGF GA
Sbjct: 61 PAEGHAKKADAAPKRFIREFRNVDVDA-YEVGQEVSVDTFVAGDVIDVTGVSKGKGFQGA 119
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
+KRH +HG S HR+ GS G D RVFK +KM GRMGGN VTV+NLEVV VD
Sbjct: 120 IKRHGQSRGPMSHG-SHFHRAPGSVGMASDASRVFKGQKMPGRMGGNTVTVQNLEVVQVD 178
Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
+ +ILVKG VPG KK + +R S K
Sbjct: 179 TENKVILVKGNVPGPKKG-LVEIRTSIKKGNK 209
>gi|221220576|gb|ACM08949.1| Mitochondrial 39S ribosomal protein L3 [Salmo salar]
Length = 342
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 84/210 (40%), Positives = 117/210 (55%), Gaps = 4/210 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAV-QVGAGEAKVK 59
R G+VA KLGM V+ G R VT+L + +C V+ + + +K +G+ A VG A
Sbjct: 91 RVGLVAVKLGMAPVWTKTGERHVVTMLQVQDCHVLNYLSKEKYDGHTAALVVGGKNASPF 150
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+ F V PK+K+ F+V D+ ++ G+ ++F GQ VDVT TIGKG
Sbjct: 151 YKTDEEMEMFRLAGVPPKQKVTTFKVS-DNAIIKPGTPLYAAHFRPGQYVDVTAKTIGKG 209
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G MKR+ F G A+HG + +HR G++G DP +VFK KKM G MG T L+V
Sbjct: 210 FQGVMKRYGFKGQPASHGQTKTHRRPGASGPGGDPAKVFKGKKMPGMMGNVFDTAHGLKV 269
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
V+ K +I V G VPG KN + VRD+
Sbjct: 270 WRVNTKYNVIYVHGSVPG-HKNCLLKVRDT 298
>gi|256847763|ref|ZP_05553208.1| 50S ribosomal protein L3 [Lactobacillus coleohominis 101-4-CHN]
gi|256715452|gb|EEU30428.1| 50S ribosomal protein L3 [Lactobacillus coleohominis 101-4-CHN]
Length = 220
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 77/215 (35%), Positives = 121/215 (56%), Gaps = 4/215 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT V+ G +PVTV+ + V+ +T++ +GY AVQ+G + +
Sbjct: 1 MTKGILGKKVGMTQVFTDNGELVPVTVVDVTPNVVMQIKTVENDGYNAVQLGFDDKREIL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+K +G + N +PK+ + E R + D + VG F G+ VDVTG+T G G+
Sbjct: 61 SNKAEQGHAAKANTAPKRFIGEIRDAELGDDIKVGDEVKADIFAEGETVDVTGITKGHGY 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G + + HG S HR GS G VFK KK+ GRMGGN T+++L+VV
Sbjct: 121 QGNIHKDGQSRGPMAHG-SRYHRRPGSLGAI--INHVFKGKKLPGRMGGNTRTMQHLQVV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
VD + ++L+KG VPGA K S++ +++S K+
Sbjct: 178 KVDTENNVLLIKGNVPGANK-SYVTIKNSVKANTK 211
>gi|293363580|ref|ZP_06610336.1| 50S ribosomal protein L3 [Mycoplasma alligatoris A21JP2]
gi|292552929|gb|EFF41683.1| 50S ribosomal protein L3 [Mycoplasma alligatoris A21JP2]
Length = 277
Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats.
Identities = 81/213 (38%), Positives = 118/213 (55%), Gaps = 6/213 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT +Y G R+ VTV+ + V + DKNGY+A Q+ + K
Sbjct: 1 MKGILGRKVGMTQIYTELGTRVAVTVIEVQPNVVTKVLSSDKNGYVATQLAVFDKKASRS 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ N +PK+ + E R D +G + + F VG LVDVTG + GKGF+
Sbjct: 61 NKPETGHFAKANTTPKRYVKEVR---DMSGYELGQLVQANIFKVGDLVDVTGTSKGKGFA 117
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP--GRVFKNKKMAGRMGGNRVTVKNLEV 179
G +KRHN +HG + TG D +V K M G++G + TV+NLEV
Sbjct: 118 GTIKRHNQHIGPKSHGGGGGSQPVRQTGSLGDIAGNKVVKGMTMPGQLGNVKTTVQNLEV 177
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD K L+L+KG +PG KK S+++V++ K
Sbjct: 178 VKVDLKNNLLLIKGSIPGPKK-SFVMVKEGVKG 209
>gi|321310980|ref|YP_004193309.1| 50S ribosomal protein L4 [Mycoplasma haemofelis str. Langford 1]
gi|319802824|emb|CBY93470.1| ribosomal protein L3 [Mycoplasma haemofelis str. Langford 1]
Length = 229
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 83/213 (38%), Positives = 122/213 (57%), Gaps = 4/213 (1%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
+V +KLGMT V++ G IPVT + ++ ++ +T++K+GY AV VG G K +SKP
Sbjct: 4 IVGKKLGMTQVFSDSGTLIPVTAIEVEPNLILSLKTVEKDGYSAVVVGYGSVKETRLSKP 63
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+RG F + ++ +FE R D L + S F VG LVDV+G+T G GF+GA+
Sbjct: 64 VRGQFQKKGLEVRRNIFELRNSSQDGLKEGELLKVDSLFKVGDLVDVSGVTRGHGFTGAI 123
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQD---PGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
K NF +HG HR GS + P +V+K KKMAGR G RV+ NLE+V
Sbjct: 124 KLWNFSCGPRSHGAGYPHRYQGSLETGRGGVSPQKVWKGKKMAGRYGCERVSQINLEIVY 183
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VD ++ L+ VKG V G + NS + ++ + +
Sbjct: 184 VDPEKNLLFVKGSVAG-RSNSIVRIKTTTRKKK 215
>gi|1685371|gb|AAB36822.1| ribosomal protein L3 [Borrelia burgdorferi]
Length = 206
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 89/211 (42%), Positives = 128/211 (60%), Gaps = 6/211 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT ++ G +PVTV+ ++ +T+D++GY A+ G+ + K V
Sbjct: 1 MLGLIGKKVGMTQIFQKNGIVVPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKSSKV 60
Query: 62 SKPMRGFFSS-VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SKP++G + S ++ PK+ + E K D G F + VDVTG T GKGF
Sbjct: 61 SKPIKGQYKSLKDIEPKRYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GAMKRHNF G ++HG S HR G TG P R FK KMAGRM GN+ T++NLEVV
Sbjct: 118 QGAMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMAGNQQTIQNLEVV 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+D+++ +LVKG VPGA K S+++V+ S K
Sbjct: 177 LIDEEKRALLVKGPVPGA-KGSFVVVKKSKK 206
>gi|224534796|ref|ZP_03675368.1| ribosomal protein L3 [Borrelia spielmanii A14S]
gi|224514044|gb|EEF84366.1| ribosomal protein L3 [Borrelia spielmanii A14S]
Length = 206
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 92/211 (43%), Positives = 129/211 (61%), Gaps = 6/211 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT ++ G +PVT++ ++ +T+D++GY A+ G+ + K V
Sbjct: 1 MLGLIGKKVGMTQIFQKNGIVVPVTIIEFQPNYIIGKKTVDRDGYSALIAGSVDLKGSKV 60
Query: 62 SKPMRGFFSS-VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SKP++G + S ++ PKK + E K D G F + VDVTG T GKGF
Sbjct: 61 SKPIKGQYKSLKDIEPKKYVIEL---KGLDGYDAGDEIKVDVFKSVRYVDVTGTTKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GAMKRHNF G A+HG S HR G TG P R FK KMAGRMGGN+ T++NLEVV
Sbjct: 118 QGAMKRHNFSGGPASHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNQQTIQNLEVV 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+D+++ ILVKG VPGA K S+++V+ S K
Sbjct: 177 LIDEEKRAILVKGAVPGA-KGSFVVVKKSKK 206
>gi|284042804|ref|YP_003393144.1| 50S ribosomal protein L3 [Conexibacter woesei DSM 14684]
gi|283947025|gb|ADB49769.1| 50S ribosomal protein L3 [Conexibacter woesei DSM 14684]
Length = 205
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 80/203 (39%), Positives = 108/203 (53%), Gaps = 4/203 (1%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++A+KLGMT + +GR VTVL C V RT +++GY AVQ+ G + K ++K
Sbjct: 4 ILAKKLGMTQRFLEDGRVERVTVLEAGPCPVTAIRTHERDGYEAVQLAFGACREKKLTKA 63
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
G + S + L EFR + + L VG + F GQ V V G + GKGF G +
Sbjct: 64 ELGHLKKADASAHRHLVEFRDEAGE--LQVGETVTVEAFEAGQTVKVAGTSKGKGFQGTI 121
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KRHNF +HG R+ GS G P RV K + G+MG RVT K LE+V +
Sbjct: 122 KRHNFRRGPKSHGSHNV-RAPGSIGASAWPARVMKGIRGPGQMGNKRVTQKGLEIVEIVS 180
Query: 185 KRGLILVKGCVPGAKKNSWILVR 207
K L+LV+G VPG K + VR
Sbjct: 181 KDNLMLVRGSVPGP-KGGTVEVR 202
>gi|148244329|ref|YP_001219023.1| 50S ribosomal protein L3 [Candidatus Vesicomyosocius okutanii HA]
gi|226730587|sp|A5CXK4|RL3_VESOH RecName: Full=50S ribosomal protein L3
gi|146326156|dbj|BAF61299.1| 50S ribosomal protein L3 [Candidatus Vesicomyosocius okutanii HA]
Length = 241
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 91/225 (40%), Positives = 136/225 (60%), Gaps = 10/225 (4%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEA---- 56
M +V +K+GMT + + +G +PV+V+ ++ ++V RT+D +GY A+QV G+
Sbjct: 1 MAIDLVGQKIGMTRLISDDGSIMPVSVIKIEPNRIVQTRTIDIDGYRAIQVTTGKKVNKK 60
Query: 57 ---KVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTG 113
KV+ +S ++G ++ + L+EF++ +D+ + + S F G VDV G
Sbjct: 61 GEAKVRRISAAIKGHYAKASQEIGLGLWEFKL--EDNEITNATSIDISLFGAGHYVDVIG 118
Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
+ GKGF G +K HNF ATHG SISHR+ GSTG Q+PGRVFK KKMAG MG +VT
Sbjct: 119 KSKGKGFQGGVKLHNFQMQDATHGNSISHRAIGSTGQCQEPGRVFKGKKMAGHMGNKQVT 178
Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+ L+VV VD ++ +ILVKG +PGA K ++ V S K + K
Sbjct: 179 QECLKVVKVDIEKSVILVKGSIPGAIKG-FVKVSLSPKKDNSNKE 222
>gi|153004713|ref|YP_001379038.1| 50S ribosomal protein L3 [Anaeromyxobacter sp. Fw109-5]
gi|166233114|sp|A7HBF8|RL3_ANADF RecName: Full=50S ribosomal protein L3
gi|152028286|gb|ABS26054.1| ribosomal protein L3 [Anaeromyxobacter sp. Fw109-5]
Length = 236
Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats.
Identities = 83/225 (36%), Positives = 120/225 (53%), Gaps = 8/225 (3%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M +G++A+KLGMT ++ EG IPVTVL C VV +T +K+GY AV +G GE K+
Sbjct: 1 MATGLLAKKLGMTQIFTAEGDCIPVTVLEAGPCTVVRRKTAEKDGYDAVVIGWGEVDEKH 60
Query: 61 ---VSKPMRGFFSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPS-YFTVGQLVDVTGM 114
++KP G F + + E RV+ L G V + F Q +DV G+
Sbjct: 61 AHRLTKPEVGVFKKAGTPVFRHVKEIRVKDAKLLGELKAGDVLTVDKVFKQDQRIDVAGV 120
Query: 115 TIGKGFSGAMKRHNFGGLRA-THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
T G+GF+G MKR N G + HR G+ G R+ PG+V+K K + G G + VT
Sbjct: 121 TKGRGFTGVMKRWNMHGAARDSSTTHEHHRHVGAIGQRKTPGKVWKGKHLPGHYGVDNVT 180
Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
++NL +V V+ + L+LVKG VPG + + V + K K
Sbjct: 181 IQNLTIVGVEADKNLLLVKGAVPG-HNDGLLFVNTAVKGQPRVKK 224
>gi|225710684|gb|ACO11188.1| Mitochondrial 39S ribosomal protein L3 [Caligus rogercresseyi]
Length = 342
Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats.
Identities = 83/210 (39%), Positives = 117/210 (55%), Gaps = 4/210 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAV-QVGAGEAKVK 59
R G+VA KLGM V+ G R VT+L + +C V+ + + +K +G+ A VG A
Sbjct: 91 RVGLVAVKLGMAPVWTKTGERHVVTMLQVQDCHVLNYLSKEKYDGHTAALVVGGKNASPF 150
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+ F V PK+K+ F+V D+ ++ G+ ++F GQ VDVT TIGKG
Sbjct: 151 YKTDEEMEMFRLAGVPPKQKVTTFKVS-DNAIIKPGTPLYAAHFRPGQYVDVTAKTIGKG 209
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G MKR+ F G A+HG + +HR G++G DP +VFK KKM G MG T L+V
Sbjct: 210 FQGVMKRYGFKGQPASHGQTKTHRRPGASGPGGDPAKVFKGKKMPGMMGNVFDTAHGLKV 269
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
V+ + +I V G VPG KN + VRD+
Sbjct: 270 WRVNTRYNVIYVHGSVPG-HKNCLLKVRDT 298
>gi|323440070|gb|EGA97785.1| 50S ribosomal protein L3 [Staphylococcus aureus O11]
Length = 209
Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats.
Identities = 89/212 (41%), Positives = 116/212 (54%), Gaps = 11/212 (5%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK--------VKNVSK 63
MT V+ G IPVTV+ V+ +T++ +GY A+QVG + K K +K
Sbjct: 1 MTQVFGENGELIPVTVVEAKENVVLQKKTVEVDGYNAIQVGFEDKKAYKKDAKSNKYANK 60
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P G + +PK+ + EFR D VG S F G ++DVTG++ GKGF GA
Sbjct: 61 PAEGHAKKADAAPKRFIREFRNVDVDA-YEVGQEVSVDTFVAGDVIDVTGVSKGKGFQGA 119
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
+KRH +HG S HR+ GS G D RVFK +KM GRMG N VTV+NLEVV VD
Sbjct: 120 IKRHGQSRGPMSHG-SHFHRAPGSVGMASDASRVFKGQKMPGRMGRNTVTVQNLEVVQVD 178
Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
+ +ILVKG VPG KK + +R S K
Sbjct: 179 TENKVILVKGNVPGPKKG-LVEIRTSIKKGNK 209
>gi|108804974|ref|YP_644911.1| 50S ribosomal protein L3P [Rubrobacter xylanophilus DSM 9941]
gi|123368030|sp|Q1AU29|RL3_RUBXD RecName: Full=50S ribosomal protein L3
gi|108766217|gb|ABG05099.1| LSU ribosomal protein L3P [Rubrobacter xylanophilus DSM 9941]
Length = 205
Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats.
Identities = 84/209 (40%), Positives = 117/209 (55%), Gaps = 6/209 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M + V ARK MT + +G + VTVL ++ V +T +K+GY AVQVG G K
Sbjct: 1 MATAVFARKKYMTQAFQDDGTAVGVTVLEVEPNVVTAVKTAEKDGYEAVQVGFGAVKSGR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V++P G F+ +++ P++ L E R + VG F G V V+ + G+GF
Sbjct: 61 VNRPHAGVFAKLDIPPRRYLRELRGVSGE----VGQTIGADAFEAGDRVHVSARSKGRGF 116
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH FG THG S + R GS G DP R+FK ++M G MG VTV+NLEVV
Sbjct: 117 QGTVKRHGFGRGPVTHG-SHNIRQPGSVGASADPSRIFKGQRMPGHMGDRSVTVRNLEVV 175
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
VD +R I V+G VPG +N+ + VR +
Sbjct: 176 RVDAERNEIWVRGGVPGG-RNAIVKVRKA 203
>gi|50555650|ref|XP_505233.1| YALI0F10076p [Yarrowia lipolytica]
gi|49651103|emb|CAG78040.1| YALI0F10076p [Yarrowia lipolytica]
Length = 277
Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats.
Identities = 103/210 (49%), Positives = 141/210 (67%), Gaps = 3/210 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG--EAKVK 59
R+G +A K GM Y+ G +P TVL +D CQVV H+T +K+GY AVQVG G ++
Sbjct: 48 RTGALAFKRGMISWYDENGVHMPATVLEIDLCQVVGHKTEEKHGYNAVQVGMGHRNKALQ 107
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
++K G FS+ V+PK+ + EFR++ D LLP+ + + S+F VGQ VDV + GKG
Sbjct: 108 KMNKSKLGQFSAATVNPKQAVAEFRIRGKDGLLPITTEITASHFKVGQYVDVQATSKGKG 167
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
FSG MKRH F GL A+HGVS+ HRS G+TG DPGRVF +KMAG MG VT+KN +V
Sbjct: 168 FSGVMKRHGFSGLPASHGVSLKHRSGGTTGQNTDPGRVFPGRKMAGNMGNETVTLKNQKV 227
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
+SVD+ G+++VKG VPG+ K + + D+
Sbjct: 228 LSVDEDTGIVIVKGMVPGS-KGKIVKLSDA 256
>gi|133117|sp|P18665|RM03_RAT RecName: Full=39S ribosomal protein L3, mitochondrial; Short=L3mt;
Short=MRP-L3
Length = 347
Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats.
Identities = 73/220 (33%), Positives = 113/220 (51%), Gaps = 6/220 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD-KNGYMAVQVGAGEAKVK- 59
R G++A KLGM ++ +G++ VT+L + +C V+ + + NG A G+ +
Sbjct: 96 RVGLIALKLGMMPLWTKDGQKHAVTLLQVQDCHVLKYTPKEDHNGKTATLTVGGKTGSRL 155
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+ + F+ + + PK+ F V D+ ++ G+ ++F GQ VDVT TIGKG
Sbjct: 156 YKANSILEFYRDLGLPPKQTTKIFHVT-DNAVIKQGTPLYAAHFRPGQYVDVTAKTIGKG 214
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G MKR F G A+HG + +HR G+ D RV+ KM G+MG TV L+V
Sbjct: 215 FQGVMKRWGFKGQPASHGQTKTHRRPGAIST-GDIARVWPGTKMPGKMGNQNRTVYGLKV 273
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
V+ K +I V G V +N + ++DS A GK
Sbjct: 274 WRVNTKHNIIYVNGSV--GHRNCLVKIKDSTLPAYKDLGK 311
>gi|194383748|dbj|BAG59232.1| unnamed protein product [Homo sapiens]
Length = 375
Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats.
Identities = 75/219 (34%), Positives = 109/219 (49%), Gaps = 3/219 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAVQVGAGEAKVKN 60
R G++A KLGM ++ +G++ VT+L + +C V+ + + + NG MA G+ +
Sbjct: 123 RVGLIALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTSKENCNGKMATLSVGGKTVSRF 182
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
F P K+ + D+ + G+ ++F GQ VDVT TIGKGF
Sbjct: 183 RKATSILEFYRELGLPPKQTVKIFNITDNAAIKPGTPLYAAHFRPGQYVDVTAKTIGKGF 242
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G MKR F G ATHG + +HR G+ D GRV+ KM G+ G T L+V
Sbjct: 243 QGVMKRWGFKGQPATHGQTKTHRRPGAVAT-GDIGRVWPGTKMPGKTGNIYRTEYGLKVW 301
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
++ K +I V G VPG KN + V+DS A GK
Sbjct: 302 RINTKHNIIYVNGSVPG-HKNCLVKVKDSKLPAYKDLGK 339
>gi|281212110|gb|EFA86271.1| ribosomal protein L3 [Polysphondylium pallidum PN500]
Length = 338
Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats.
Identities = 107/208 (51%), Positives = 141/208 (67%), Gaps = 3/208 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G + +K+GMT V+ ++ IPVTV+HL N QVV + +G A+QVGA E ++KNV
Sbjct: 59 RVGAIGKKVGMTTVW-VDHVAIPVTVVHLPNNQVVQVKHKVNDGVDALQVGADEIRLKNV 117
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
M+G F+ +V PK+ L EF V ++ LPVG+ +P +F GQLV + G++ GKGF
Sbjct: 118 KGTMKGHFAKADVPPKRILMEFPVTRNA-FLPVGTQITPRHFVPGQLVTIKGVSTGKGFQ 176
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR NF GL ATHGVS+SHRS GSTGCRQ PGRVFK KKM G +G TV NL+V+
Sbjct: 177 GGMKRWNFSGLAATHGVSVSHRSIGSTGCRQTPGRVFKGKKMPGHLGSESTTVLNLQVIQ 236
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209
+ + G I++KG VPG KK S+I + DS
Sbjct: 237 CNTELGTIMLKGAVPG-KKGSYIRIIDS 263
>gi|111115307|ref|YP_709925.1| 50S ribosomal protein L3 [Borrelia afzelii PKo]
gi|123341335|sp|Q0SN29|RL3_BORAP RecName: Full=50S ribosomal protein L3
gi|110890581|gb|ABH01749.1| ribosomal protein L3 [Borrelia afzelii PKo]
Length = 206
Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats.
Identities = 91/211 (43%), Positives = 129/211 (61%), Gaps = 6/211 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT ++ G +PVTV+ ++ +T+D++GY A+ G+ + K V
Sbjct: 1 MLGLIGKKVGMTQIFQKNGIVVPVTVIEFQPNYIIGKKTVDRDGYSALIAGSVDLKGSKV 60
Query: 62 SKPMRGFFSS-VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SKP++G + S ++ PKK + E K D G F + VDVTG T GKGF
Sbjct: 61 SKPIKGQYKSLKDIEPKKYVIEL---KGLDGYDAGDEIKVDVFKSVKYVDVTGTTKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GAMKRHNF G ++HG S HR G TG P R FK KMAGRMGGN+ T++NLEVV
Sbjct: 118 QGAMKRHNFSGGPSSHG-SKFHRHLGGTGQATTPARTFKGTKMAGRMGGNQQTIQNLEVV 176
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+++++ ILVKG VPGA K S+++V+ S K
Sbjct: 177 LINEEKRAILVKGAVPGA-KGSFVVVKKSKK 206
>gi|116327224|ref|YP_796944.1| 50S ribosomal protein L3 [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116327264|ref|YP_796984.1| 50S ribosomal protein L3 [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116332122|ref|YP_801840.1| 50S ribosomal protein L3 [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|122280148|sp|Q04PT8|RL3_LEPBJ RecName: Full=50S ribosomal protein L3
gi|122284929|sp|Q055E4|RL3_LEPBL RecName: Full=50S ribosomal protein L3
gi|116119968|gb|ABJ78011.1| 50S Ribosomal protein L3 [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116120008|gb|ABJ78051.1| 50S Ribosomal protein L3 [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116125811|gb|ABJ77082.1| 50S Ribosomal protein L3 [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 206
Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats.
Identities = 72/206 (34%), Positives = 113/206 (54%), Gaps = 3/206 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GM+ +++ +G IPVTVL + C V ++++ +GY A+Q+ + K
Sbjct: 1 MAKGLIGKKVGMSQIFDEQGNIIPVTVLEVGPCAVSQVKSVENDGYEAIQLAFQDTKEFQ 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+SK + + ++ PKK L EFR D + F V +V VTG++ G+GF
Sbjct: 61 ISKAEKNHLAKASLGPKKVLREFR-SFGDSPATGSVLKVQDIFAVSDVVKVTGVSKGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH G S HR GS G P RVFK K+ GR G + TV+NL+VV
Sbjct: 120 QGVVKRHGHAGGPGG-HGSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSQQTTVRNLKVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
+++++ L+ V G VPG N+ I +
Sbjct: 179 RINEEKNLVFVSGAVPG-TTNTVITI 203
>gi|297671980|ref|XP_002814097.1| PREDICTED: LOW QUALITY PROTEIN: 39S ribosomal protein L3,
mitochondrial-like [Pongo abelii]
Length = 374
Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats.
Identities = 77/220 (35%), Positives = 113/220 (51%), Gaps = 6/220 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAVQVGAGE-AKVK 59
R G++A KLGM ++ +G++ VT+L + +C V+ + + + NG MA G+
Sbjct: 123 RVGLIALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTSKENHNGKMATLSVGGKTVSRF 182
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+ + F+ + + PK+ + F + + L ++F GQ VDVT TIGKG
Sbjct: 183 RKATSILEFYRELGLPPKQTVKXFNITDNAAL--NRHSLYAAHFRPGQYVDVTAKTIGKG 240
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G MKR F G ATHG + +HR G+ D GRV+ KM G+MG T L+V
Sbjct: 241 FQGVMKRWGFKGQPATHGQTKTHRRPGAVAT-GDIGRVWPGTKMPGKMGNIYRTEYGLKV 299
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
++ K +I V G VPG KN + VRDS A GK
Sbjct: 300 WRINTKHNIIYVNGSVPG-HKNCLVKVRDSSMPAYKDLGK 338
>gi|261749470|ref|YP_003257156.1| 50S ribosomal protein L3 [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
gi|261497563|gb|ACX84013.1| 50S ribosomal protein L3 [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
Length = 210
Score = 181 bits (459), Expect = 7e-44, Method: Composition-based stats.
Identities = 82/206 (39%), Positives = 126/206 (61%), Gaps = 3/206 (1%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ LGMT +++ G IP T++ + C V+ +T++K+GY A+Q+G + K K+ +K
Sbjct: 3 GLIGINLGMTSLFSKNGENIPCTIVKVGPCYVIQVKTMEKDGYSAIQLGIIDKKEKHTTK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
++G F + PKKKL EF+ + +GS + + F G+LVDV G+T GKGF G
Sbjct: 63 ALQGHFRKSGIFPKKKLLEFK-DVLSPSIKLGSQININSFVEGELVDVRGITKGKGFQGV 121
Query: 124 MKRHNFG-GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F +HG R+ GS G DP R+FK KKMAGRMGG VT+KNL ++ +
Sbjct: 122 VKRHKFSGVGERSHGQHNRLRAPGSVGAGSDPSRIFKGKKMAGRMGGKHVTIKNLTILKI 181
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRD 208
D + ++ G VPG KNS+++++
Sbjct: 182 DVTENIFILNGSVPG-NKNSYLMIKK 206
>gi|148689149|gb|EDL21096.1| mitochondrial ribosomal protein L3, isoform CRA_a [Mus musculus]
Length = 304
Score = 181 bits (459), Expect = 7e-44, Method: Composition-based stats.
Identities = 72/211 (34%), Positives = 107/211 (50%), Gaps = 5/211 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNG--YMAVQVGAGEAKVK 59
R G++A KLGM ++ +G++ VT+L + +C V+ + + + A+ VG
Sbjct: 96 RVGLIALKLGMMPLWTKDGQKHAVTLLQVQDCHVLKYTPKEDHNGKIAALTVGGKTVSRF 155
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
F+ + + PK+ F V D+ ++ G+ ++F GQ VDVT TIGKG
Sbjct: 156 YKPDSRLEFYRDLGLPPKQIHKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGKG 214
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G MKR F G A+HG + +HR G+ D RV+ KM GRMG TV L+V
Sbjct: 215 FQGVMKRWGFKGQPASHGQTKTHRRPGAIST-GDIARVWPGTKMPGRMGNQNRTVYGLKV 273
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
V+ K +I V G VPG KN + V +
Sbjct: 274 WRVNTKHNIIYVNGSVPG-HKNCLVKVCTAV 303
>gi|37912991|gb|AAR05320.1| ribosomal protein L3 [uncultured marine alpha proteobacterium
HOT2C01]
Length = 229
Score = 180 bits (458), Expect = 8e-44, Method: Composition-based stats.
Identities = 102/212 (48%), Positives = 140/212 (66%), Gaps = 4/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSG++A+K+GM+ +Y G IPVTVLH++NC+++ T + + +V G K+K
Sbjct: 1 MRSGIIAKKIGMSNLYTQSGTNIPVTVLHVENCKIIDRVTSENE--NSDKVLVGACKLKK 58
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
K +GFF K L EF + K D + G S+F GQ +DV+G T GKGF
Sbjct: 59 TKKSQKGFFDKKKTDAYKYLREFEISK-DQEIKSGDELKASHFKEGQFIDVSGYTKGKGF 117
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKRHNF GLRA+HGVS+SHRSHGSTG QDPG+VFK KKMAG+ G T+++L+VV
Sbjct: 118 AGVMKRHNFSGLRASHGVSVSHRSHGSTGQCQDPGKVFKGKKMAGQYGDVHKTLQSLQVV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD+++ LI VKG PG+ + +W++V DS K
Sbjct: 178 KVDEQKNLICVKGATPGS-RGTWLVVEDSIKK 208
>gi|256370780|ref|YP_003108605.1| 50S ribosomal protein L3 [Candidatus Sulcia muelleri SMDSEM]
gi|256009572|gb|ACU52932.1| 50S ribosomal subunit protein L3 [Candidatus Sulcia muelleri
SMDSEM]
Length = 205
Score = 180 bits (458), Expect = 9e-44, Method: Composition-based stats.
Identities = 79/209 (37%), Positives = 127/209 (60%), Gaps = 5/209 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT ++ +G ++P T++ C V+ +TL K+GY + Q+G E K+K
Sbjct: 1 MLGIIGKKIGMTSFFDEKGLKVPCTIIVAGPCLVLQKKTLKKDGYNSYQIGFEEKKIKKT 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+K + G F +PKKK+ EF ++K+ L G + F +LVD+TG + GKGF
Sbjct: 61 NKSLLGNFKKFKSTPKKKIVEFSLKKE---LKSGDIIKVDIFNENELVDITGFSKGKGFQ 117
Query: 122 GAMKRHNFG-GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH F +HG +R+ GS G DP RVFK +MAGRMG +VT+K L+++
Sbjct: 118 GVIKRHGFSGVGEKSHGQHNRYRAPGSIGAGSDPSRVFKGTRMAGRMGNKKVTIKKLKIL 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
+D + L+++KG VPG KNS++ ++ +
Sbjct: 178 KIDLLKNLLIIKGSVPG-TKNSFLKIKKT 205
>gi|241957878|ref|XP_002421658.1| 60s ribosomal protein, mitochondrial precursor, putative [Candida
dubliniensis CD36]
gi|223645003|emb|CAX39595.1| 60s ribosomal protein, mitochondrial precursor, putative [Candida
dubliniensis CD36]
Length = 293
Score = 180 bits (458), Expect = 9e-44, Method: Composition-based stats.
Identities = 101/220 (45%), Positives = 134/220 (60%), Gaps = 6/220 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G+ A K GM +N +G IP TVL +D+C+V+ ++ GY AV +G +
Sbjct: 67 RPGLFAIKRGMITWFNEKGEHIPATVLEVDSCEVLGYKLFRDFGYTAVIMGTIDKLKNVK 126
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDD-----LLPVGSVFSPSYFTVGQLVDVTGMTI 116
S F + VSPK+K+ EF+++ D+ L+PVG+ + YFTVGQ VDV G+T
Sbjct: 127 STNDLRIFETAKVSPKQKIGEFKIRSIDNDIESKLIPVGTELTADYFTVGQKVDVKGITK 186
Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
GKGF+G MKR F G RATHG S +HR+ G+TG Q+PGRVF KKM GRMG T N
Sbjct: 187 GKGFAGVMKRWGFSGGRATHGTSKAHRTPGATGGNQNPGRVFPGKKMPGRMGNRNNTGFN 246
Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
LEV+ D + G+++VKG VPG KK S I V D+ K N
Sbjct: 247 LEVLHTDGEAGILIVKGNVPGPKK-SIIKVYDAIKEYGNS 285
>gi|189485085|ref|YP_001956026.1| 50S ribosomal protein L3 [uncultured Termite group 1 bacterium
phylotype Rs-D17]
gi|212288415|sp|B1GZ83|RL3_UNCTG RecName: Full=50S ribosomal protein L3
gi|170287044|dbj|BAG13565.1| 50S ribosomal protein L3 [uncultured Termite group 1 bacterium
phylotype Rs-D17]
Length = 227
Score = 180 bits (458), Expect = 9e-44, Method: Composition-based stats.
Identities = 87/212 (41%), Positives = 128/212 (60%), Gaps = 3/212 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M ++ +K+GMT V++++G +PVTV+ + +C V RT++KNGY AVQ+G GE K K
Sbjct: 1 MLKFIIGKKIGMTQVFDVKGNLMPVTVVEVGHCVVTDVRTVEKNGYSAVQLGFGEIKEKG 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++K FF N+S K+ L EFRV + VG F G VDV+ +T GKG+
Sbjct: 61 LNKAQAVFFKRNNLSYKRTLKEFRVSEVAG-FSVGHEIKADAFKAGDYVDVSAVTKGKGY 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KRHNFG +HG S RS GS+G Q P +V K KM+G MG VTV+ L +V
Sbjct: 120 AGVIKRHNFGMQPVSHGQSDRTRSRGSSG-AQGPQKVLKGLKMSGHMGNEYVTVQKLLIV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+VD ++ ++L+KG VP A + + + + K
Sbjct: 179 NVDAEKNVLLIKGSVPSANRGTL-FISSTLKK 209
>gi|190346390|gb|EDK38465.2| hypothetical protein PGUG_02563 [Meyerozyma guilliermondii ATCC
6260]
Length = 279
Score = 180 bits (458), Expect = 1e-43, Method: Composition-based stats.
Identities = 101/210 (48%), Positives = 137/210 (65%), Gaps = 2/210 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ K GM Y +G + TVL +D+C+V+ ++T + +GY AV VG+G K+KN+
Sbjct: 57 RPGLLGIKRGMITWYTEDGNQFAATVLEVDSCEVMANKTKETDGYTAVMVGSGT-KLKNL 115
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+ VSPK+ + EFRV+ + L+PVG+ YF VGQLVDV+G++ GKGF+
Sbjct: 116 TPDQLRLAQQAGVSPKRSIREFRVRDESGLIPVGTELRADYFAVGQLVDVSGVSKGKGFA 175
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRH F GL+A+HGVS +HRS GSTG QDPGRV KKMAG MG TV N EV+
Sbjct: 176 GVIKRHGFAGLQASHGVSKAHRSAGSTGATQDPGRVLPGKKMAGHMGAVNRTVFNNEVLH 235
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
D G+++VKG VPG K S I +RD+ K
Sbjct: 236 ADGDAGILVVKGVVPGPNK-SVIKIRDAKK 264
>gi|224045473|ref|XP_002196500.1| PREDICTED: mitochondrial ribosomal protein L3 [Taeniopygia guttata]
Length = 501
Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats.
Identities = 77/216 (35%), Positives = 112/216 (51%), Gaps = 5/216 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R GVVA KLGM ++ G + VT+L + +C V+ + + +++G ++ G V
Sbjct: 250 RVGVVAVKLGMMPIWTKSGEKHAVTLLKVQDCHVLRYVSKEESGAKTAKLLVGGKNVSPF 309
Query: 62 SKPMRGF--FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
SKP F V K+K+ F V DD ++ G+ ++F GQ VDVT TIGKG
Sbjct: 310 SKPESAHEIFKEAGVPRKQKVTTFNVT-DDAIIKPGTPLYAAHFRPGQFVDVTAKTIGKG 368
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G MKR F G A+HG + +HR G+ + +V++ KKM G+MG T L+V
Sbjct: 369 FQGVMKRWGFKGQPASHGQTKTHRRPGAISTNK-AAKVYRGKKMPGKMGNIYRTSFGLKV 427
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
++ K +I V G VPG N + VRDS
Sbjct: 428 WRINTKHDIIYVNGSVPG-HTNCLVKVRDSKLPTYK 462
>gi|255994807|ref|ZP_05427942.1| 50S ribosomal protein L3 [Eubacterium saphenum ATCC 49989]
gi|255993520|gb|EEU03609.1| 50S ribosomal protein L3 [Eubacterium saphenum ATCC 49989]
Length = 315
Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats.
Identities = 79/217 (36%), Positives = 114/217 (52%), Gaps = 3/217 (1%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
+ +K GMT ++ +G IPVTV+ +VV +T +GY AV+V E K ++KP
Sbjct: 14 IFGKKAGMTQIFTEDGVSIPVTVIEAYPAKVVQIKTQATDGYDAVKVAYIETKEHRINKP 73
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+G +K+ EF + + VG V + S + G VDVTG + GKG +G +
Sbjct: 74 KKGELDKAKAGAMRKMAEFTPENGVE-YKVGDVITVSELSEGNKVDVTGTSKGKGTAGNI 132
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KRH +HG R G+ PGRVFK K G MG +VTV+NL++V + +
Sbjct: 133 KRHGHRRGPMSHGSKHK-RLAGALAGAAYPGRVFKGNKGPGHMGDEQVTVQNLDLVKLIE 191
Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
R ++LVKG VPG KK ++V S KS GK +
Sbjct: 192 DRNVLLVKGAVPG-KKGGEVMVTYSKKSEYVLSGKAA 227
>gi|330819132|ref|XP_003291618.1| hypothetical protein DICPUDRAFT_39301 [Dictyostelium purpureum]
gi|325078183|gb|EGC31848.1| hypothetical protein DICPUDRAFT_39301 [Dictyostelium purpureum]
Length = 340
Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 137/208 (65%), Gaps = 2/208 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G + +K+GM Y PVTV+ + N QV + K+G VQ+GA E ++KNV
Sbjct: 58 RMGAIGKKVGMMTTYIGA-EAYPVTVIQIPNNQVTQVKRKIKDGANMVQIGADEIRMKNV 116
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
KP+RG F+ NV+PK+ L EF+V + + +G+ +F GQLV V G + GKGF+
Sbjct: 117 PKPLRGHFAKANVTPKRILMEFKVTNNALNIDLGTPILARHFVPGQLVTVKGKSSGKGFA 176
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR NF G ATHGVS++HRS G+TG RQ PGRVFKN+KM GR+GG TVKNL+++
Sbjct: 177 GGMKRWNFRGQPATHGVSLTHRSIGATGNRQTPGRVFKNRKMPGRLGGESCTVKNLQILK 236
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209
++++ I+VKG VPG KK S++ + DS
Sbjct: 237 INNELNCIMVKGAVPG-KKGSYLKIIDS 263
>gi|146417733|ref|XP_001484834.1| hypothetical protein PGUG_02563 [Meyerozyma guilliermondii ATCC
6260]
Length = 279
Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats.
Identities = 101/210 (48%), Positives = 136/210 (64%), Gaps = 2/210 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ K GM Y +G + TVL +D+C+V+ ++T + +GY AV VG G K+KN+
Sbjct: 57 RPGLLGIKRGMITWYTEDGNQFAATVLEVDSCEVMANKTKETDGYTAVMVGLGT-KLKNL 115
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+ VSPK+ + EFRV+ + L+PVG+ YF VGQLVDV+G++ GKGF+
Sbjct: 116 TPDQLRLAQQAGVSPKRSIREFRVRDESGLIPVGTELRADYFAVGQLVDVSGVSKGKGFA 175
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRH F GL+A+HGVS +HRS GSTG QDPGRV KKMAG MG TV N EV+
Sbjct: 176 GVIKRHGFAGLQASHGVSKAHRSAGSTGATQDPGRVLPGKKMAGHMGAVNRTVFNNEVLH 235
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
D G+++VKG VPG K S I +RD+ K
Sbjct: 236 ADGDAGILVVKGVVPGPNK-SVIKIRDAKK 264
>gi|24213439|ref|NP_710920.1| 50S ribosomal protein L3 [Leptospira interrogans serovar Lai str.
56601]
gi|45658703|ref|YP_002789.1| 50S ribosomal protein L3 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|26454655|sp|Q9XD36|RL3_LEPIN RecName: Full=50S ribosomal protein L3
gi|73917494|sp|Q72NG1|RL3_LEPIC RecName: Full=50S ribosomal protein L3
gi|24194209|gb|AAN47938.1| 50S ribosomal protein L3 [Leptospira interrogans serovar Lai str.
56601]
gi|45601947|gb|AAS71426.1| 50S ribosomal protein L3 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 206
Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats.
Identities = 71/206 (34%), Positives = 111/206 (53%), Gaps = 3/206 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GM+ +++ +G IPVTVL + C V ++++ +GY A+Q+ + K
Sbjct: 1 MAKGLIGKKVGMSQIFDEQGNIIPVTVLEVGPCAVSQVKSVENDGYEAIQLAFQDIKEIQ 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SK + + + PKK L EFR D + F V +V VTG++ G+G+
Sbjct: 61 TSKAEKNHLAKAGLGPKKVLKEFR-SFGDSPTAGSVLKIQDVFAVSDVVKVTGVSKGRGY 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH G S HR GS G P RVFK K+ GR G + TV+NL+VV
Sbjct: 120 QGVVKRHGHAGGPGA-HGSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSQKTTVRNLKVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
+++++ L+ V G VPG N+ I +
Sbjct: 179 RINEEKNLLFVSGAVPGTA-NTVITI 203
>gi|299753327|ref|XP_001833202.2| ribosomal protein L3 [Coprinopsis cinerea okayama7#130]
gi|298410250|gb|EAU88475.2| ribosomal protein L3 [Coprinopsis cinerea okayama7#130]
Length = 257
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 99/213 (46%), Positives = 132/213 (61%), Gaps = 5/213 (2%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVV-HRTLDKN--GYMAVQVGAGEAKVKNVSKPMRGF 68
M ++N +G + PVTVL LDNCQV +T + Y AVQV + + K ++ M G
Sbjct: 1 MAALWNDQGVKFPVTVLQLDNCQVTANIKTPRPDHTVYHAVQVASTDRPPKTTTRQMLGH 60
Query: 69 FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128
F+ NV PK+ + EF V D +PVG+ + ++F GQ VDV +IGKGF G MKR
Sbjct: 61 FAKANVPPKRYVKEFPVTA-DAHVPVGTTLNAAHFVPGQYVDVVAKSIGKGFQGGMKRWG 119
Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL 188
F GL A+HGVS+SHRS GS G QDPGR++ KKMAGRMGGN+VTV+NL VV VD L
Sbjct: 120 FHGLAASHGVSVSHRSSGSAGNSQDPGRIYPGKKMAGRMGGNQVTVQNLAVVRVDTALNL 179
Query: 189 ILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
+ V+G VPG N+ + +RD+ K + +
Sbjct: 180 VYVRGAVPGVD-NAPVYIRDAKKVMAVARHNEA 211
>gi|5163204|gb|AAD40583.1|AF115283_2 ribosomal protein L3 [Leptospira interrogans]
Length = 206
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 71/206 (34%), Positives = 111/206 (53%), Gaps = 3/206 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GM+ +++ +G IPVTVL + C V ++++ +GY A+Q+ + K
Sbjct: 1 MAKGLIGKKVGMSQIFDEQGNIIPVTVLEVGPCAVSQVKSVENDGYEAIQLAFQDIKEIQ 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SK + + + PKK L EFR D + F V +V VTG++ G+G+
Sbjct: 61 TSKAEKNHLAKAGLGPKKVLKEFR-SFGDSPTAGAVLKIQDVFAVSDVVKVTGVSKGRGY 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH G S HR GS G P RVFK K+ GR G + TV+NL+VV
Sbjct: 120 QGVVKRHGHAGGPGA-HGSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSQKTTVRNLKVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
+++++ L+ V G VPG N+ I +
Sbjct: 179 RINEEKNLLFVSGAVPGTA-NTVITI 203
>gi|45644693|gb|AAS73081.1| predicted ribosomal protein L3 [uncultured marine gamma
proteobacterium EBAC20E09]
Length = 202
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 84/205 (40%), Positives = 122/205 (59%), Gaps = 3/205 (1%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
M+ ++ +G IPVT + + V +T + NGY AV + + K+ N+SK FF
Sbjct: 1 MSRLFLEDGESIPVTAISVCGNFVADIKTKENNGYNAVVL-SKSKKINNLSKSQSEFFKK 59
Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
N++P L EF+V+ D D +G + F VGQ VD+TG + GKG++G +KRHNF
Sbjct: 60 NNINPGS-LSEFKVENDIDTFEIGKHMTADVFEVGQFVDITGTSKGKGYAGVIKRHNFSM 118
Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
ATHG S++HR+HGS G Q PGRV+K KKM+G MG + TV+NL++V +D + ++ V
Sbjct: 119 QDATHGNSLAHRAHGSIGQCQTPGRVWKGKKMSGHMGNVQKTVQNLKIVELDVENNVVYV 178
Query: 192 KGCVPGAKKNSWILVRDSFKSAVNC 216
KG VPG S I ++ S K
Sbjct: 179 KGAVPGF-NGSEIKIKPSHKKTKQS 202
>gi|301059231|ref|ZP_07200168.1| 50S ribosomal protein L3 [delta proteobacterium NaphS2]
gi|300446666|gb|EFK10494.1| 50S ribosomal protein L3 [delta proteobacterium NaphS2]
Length = 207
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 84/209 (40%), Positives = 116/209 (55%), Gaps = 2/209 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M + + +K+GMT + G+ PVTV+ + C V +T++K GY A+Q+G G K
Sbjct: 1 MVNKLFGKKIGMTRYFLEGGKSEPVTVVKIAPCVVTQKKTVEKEGYNAIQIGFGPKDEKR 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP++G F + L E +V D +G F +G V V G + G+GF
Sbjct: 61 TNKPLKGHFEASGGKCFAYLNEVKVDDVDA-FELGQEIKSDVFAIGDTVHVRGRSKGRGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G MKR FGG R THG S SHR GS GC DP RV K +KM GRMG VT KNL+VV
Sbjct: 120 AGVMKRWGFGGGRKTHG-SRSHRVPGSIGCSADPARVVKGRKMPGRMGNTHVTTKNLKVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
+ ++L+KG VPGA+ N + + S
Sbjct: 179 DIRPDMDILLLKGPVPGARGNLLEIFKAS 207
>gi|320538165|ref|ZP_08038060.1| 50S ribosomal protein L3 [Treponema phagedenis F0421]
gi|320144982|gb|EFW36703.1| 50S ribosomal protein L3 [Treponema phagedenis F0421]
Length = 207
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 83/211 (39%), Positives = 122/211 (57%), Gaps = 6/211 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT V+N +G +PVTV+ ++ VV + +K GY AV +G GE K K+
Sbjct: 1 MVGLIGKKIGMTQVFNEQGHLMPVTVIQVEPNTVVALKDEEKFGYSAVVLGLGEMKEKHA 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ K + D + VG + +DVT ++ GKGF
Sbjct: 61 AKPYAGQFA----DMKPVKLLKEFRGFDKEVSVGEKIGVEILDTTRYLDVTAVSKGKGFQ 116
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR FGG RA+HG S HR GSTG PGR FKN KM GRMG +VTV+NL +
Sbjct: 117 GVVKRWGFGGGRASHG-SKFHREAGSTGQCTSPGRSFKNVKMPGRMGAEKVTVQNLRIEK 175
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+D + G+++V+G VPG KK++ + ++ + K
Sbjct: 176 IDPEMGVVMVRGSVPG-KKDATVFLKSAVKR 205
>gi|325108615|ref|YP_004269683.1| 50S ribosomal protein L3P [Planctomyces brasiliensis DSM 5305]
gi|324968883|gb|ADY59661.1| LSU ribosomal protein L3P [Planctomyces brasiliensis DSM 5305]
Length = 231
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 89/230 (38%), Positives = 125/230 (54%), Gaps = 20/230 (8%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT VY G +PVTVL + C V+ RTLD++GY AVQ+G G+ +
Sbjct: 1 MPVGLLGRKVGMTQVYEEGGVVVPVTVLEVGPCPVLQVRTLDRDGYEAVQLGFGDKPRRL 60
Query: 61 VSKPMRGF-------------------FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS 101
++ RG + + P++ + EFR + + VG V +
Sbjct: 61 ATRGERGHVAEISSKRRKARQEAGVELLAKADCEPQRYVREFRTDGESLDIEVGKVLTVE 120
Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
F VDV + G+G +G MKRHNF G RA+HGV HR+ GS G DP RV K
Sbjct: 121 QFAEISNVDVVATSKGRGTAGVMKRHNFAGQRASHGVKKVHRAPGSIGQSADPSRVLKGT 180
Query: 162 KMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+MAG+ G RVTV+NL+V + + L+LVKG VPG ++LVR + K
Sbjct: 181 RMAGQYGNARVTVRNLKVARIVAEENLLLVKGAVPGPS-GGYVLVRPTNK 229
>gi|54020070|ref|YP_115700.1| 50S ribosomal protein L3 [Mycoplasma hyopneumoniae 232]
gi|81823546|sp|Q601L5|RL3_MYCH2 RecName: Full=50S ribosomal protein L3
gi|53987243|gb|AAV27444.1| 50s ribosomal protein L3 [Mycoplasma hyopneumoniae 232]
Length = 230
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 76/222 (34%), Positives = 120/222 (54%), Gaps = 7/222 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GM+ ++ EG I V+++ + V T +KN Y A+Q+ A + K
Sbjct: 1 MKGILGKKVGMSQLFTTEGIAISVSIIEVPENIVTKIITKEKNSYNAIQLAAFDKKQSRF 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
KP G F+ N PK+ + EFR D +G S F+ G+ VDVTG + GKGF+
Sbjct: 61 LKPEIGHFAKANTKPKRFIKEFR---DFQGYKLGQTVDVSIFSPGEFVDVTGTSKGKGFA 117
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP--GRVFKNKKMAGRMGGNRVTVKNLEV 179
G +KR+N +HG + TG D +V K M GR+G +VT ++LE+
Sbjct: 118 GTIKRYNQAIGPRSHGGGGGSKPIRQTGSLGDISGNKVVKGMTMPGRLGHEKVTKQSLEI 177
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
+ VD + L+++KG VPG KK S+++++ + K N K VS
Sbjct: 178 IKVDKENNLLVLKGSVPGPKK-SFLVIKSAIKKP-NPKNPVS 217
>gi|167975968|ref|ZP_02558245.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 12 str. ATCC
33696]
gi|195659702|gb|EDX53082.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 12 str. ATCC
33696]
Length = 226
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 77/206 (37%), Positives = 112/206 (54%), Gaps = 8/206 (3%)
Query: 9 KLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGF 68
K+GMT V+ G+ + TV++++ +V+ +T +K+GY A+Q+G K K ++KP+ G
Sbjct: 1 KVGMTQVFTETGKAVAATVIYVEPNKVLAVKTNEKDGYNAIQIGYETVKEKALNKPLLGQ 60
Query: 69 FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128
F N PK+ + EFR + VG+ + S F GQLV+ T G GF+G++KRHN
Sbjct: 61 FKKANSDPKRHIKEFRDVVAE----VGAELTVSEFEPGQLVNAQAYTKGHGFTGSIKRHN 116
Query: 129 FGGLRATHGVSISHRSHGST---GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
F HG HR GS RVFK K+ G G VT KNL V+ V
Sbjct: 117 FSMGPMGHGAGYPHRYVGSIAKGRGGSQAQRVFKGTKLPGHYGHELVTTKNLLVLDVKAN 176
Query: 186 RGLILVKGCVPGAKKNSWILVRDSFK 211
LIL+KG +PG K S +L++ + K
Sbjct: 177 ENLILIKGAIPGP-KGSIVLLKSAKK 201
>gi|116495947|ref|YP_807681.1| ribosomal protein L3 [Lactobacillus casei ATCC 334]
gi|191639428|ref|YP_001988594.1| 50S ribosomal protein L3 [Lactobacillus casei BL23]
gi|227533960|ref|ZP_03964009.1| ribosomal protein L3 [Lactobacillus paracasei subsp. paracasei ATCC
25302]
gi|239630351|ref|ZP_04673382.1| 50S ribosomal protein L3 [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|301067503|ref|YP_003789526.1| 50S ribosomal protein L3 [Lactobacillus casei str. Zhang]
gi|122262653|sp|Q034Y3|RL3_LACC3 RecName: Full=50S ribosomal protein L3
gi|226730526|sp|B3WAL7|RL3_LACCB RecName: Full=50S ribosomal protein L3
gi|116106097|gb|ABJ71239.1| LSU ribosomal protein L3P [Lactobacillus casei ATCC 334]
gi|190713730|emb|CAQ67736.1| 50S ribosomal protein L3 [Lactobacillus casei BL23]
gi|227188337|gb|EEI68404.1| ribosomal protein L3 [Lactobacillus paracasei subsp. paracasei ATCC
25302]
gi|239527963|gb|EEQ66964.1| 50S ribosomal protein L3 [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|300439910|gb|ADK19676.1| Ribosomal protein L3 [Lactobacillus casei str. Zhang]
gi|327383517|gb|AEA54993.1| 50S ribosomal protein L3 [Lactobacillus casei LC2W]
gi|327386710|gb|AEA58184.1| 50S ribosomal protein L3 [Lactobacillus casei BD-II]
Length = 210
Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats.
Identities = 77/213 (36%), Positives = 120/213 (56%), Gaps = 5/213 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ +K+GMT V+ G +PVTV+ + V+ +T++ +GY AVQ+G G+ +
Sbjct: 3 RKGILGKKVGMTQVFTDNGELVPVTVVDVTPNVVMQVKTVESDGYEAVQLGYGDMREVLT 62
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G + +PK+ + E R D +GS F G +VDVTG + G G+
Sbjct: 63 NKPSVGHAKKADTTPKRFVREIRDVALSD-YEIGSEVKADEFAAGDIVDVTGTSKGHGYQ 121
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +K+ HG S HR GS G +VFK KK+ GRMG + T++NL+VV+
Sbjct: 122 GNIKKDGQSRGPMAHG-SRYHRRPGSLGAI--INKVFKGKKLPGRMGNHTRTMQNLQVVA 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
D + ++L+KG VPGA K S++ +R + K+A
Sbjct: 179 ADTEHNVLLIKGNVPGANK-SFVTIRSAVKAAK 210
>gi|195952643|ref|YP_002120933.1| ribosomal protein L3 [Hydrogenobaculum sp. Y04AAS1]
gi|226730524|sp|B4U744|RL3_HYDS0 RecName: Full=50S ribosomal protein L3
gi|195932255|gb|ACG56955.1| ribosomal protein L3 [Hydrogenobaculum sp. Y04AAS1]
Length = 232
Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats.
Identities = 89/224 (39%), Positives = 128/224 (57%), Gaps = 7/224 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +KLGM V+ +G IPVT + ++ VV ++ + +GY A+QVG+ K
Sbjct: 1 MIGLIGKKLGMMRVFLNDGTAIPVTAIKVEPNYVVYIKSSETDGYNAIQVGSIPLKQSRF 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
KPM G F N++P K L EFRV D +G F+ G+LVD+ G + G+GF+
Sbjct: 61 KKPMVGHFKKANLTPLKYLKEFRVD-DVSSFALGQELGVDIFSPGELVDIVGRSKGRGFT 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR +FGG +HG HR+ GS G R DPGRV+K+K+MAGR G + V+ L VV
Sbjct: 120 GTMKRWDFGGFPKSHG-HRYHRAVGSVGNRTDPGRVWKSKRMAGRHGNETIRVQALVVVD 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS----FKSAVNCKGKVS 221
V +G+ILV G VPG K+ + + S K A + ++S
Sbjct: 179 VLKDKGIILVNGSVPG-HKDGIVYIEKSHIAFRKKAQRKQDRLS 221
>gi|302337477|ref|YP_003802683.1| 50S ribosomal protein L3 [Spirochaeta smaragdinae DSM 11293]
gi|301634662|gb|ADK80089.1| 50S ribosomal protein L3 [Spirochaeta smaragdinae DSM 11293]
Length = 206
Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats.
Identities = 87/211 (41%), Positives = 124/211 (58%), Gaps = 5/211 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT +++ G PVTV+ +++ V+ R +KNGY A +GA + K K+V
Sbjct: 1 MLGLIGKKVGMTQIFDERGVLTPVTVIKIEDNVVIDKRDEEKNGYTASVIGAEDLKSKHV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F NV PK+ L E R + + VG F VDV G + GKG+
Sbjct: 61 TKPYGGQFPE-NVHPKRYLVEMRDFEAES--SVGETLGVGIFKEISFVDVVGTSKGKGYQ 117
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
GAMKRH F G RATHG S HR G TG P +V K KM GRMG R TV+NL V+
Sbjct: 118 GAMKRHGFKGGRATHG-SKFHRGLGGTGMAATPSKVLKGAKMPGRMGAARTTVQNLRVIK 176
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD+++ +++VKG +PG + S ++V+ + K
Sbjct: 177 VDEEKQVLMVKGAIPGPCQ-SMVIVQKAKKK 206
>gi|319411891|emb|CBQ73934.1| related to MRPL9-mitochondrial ribosomal protein, large subunit
[Sporisorium reilianum]
Length = 378
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 99/218 (45%), Positives = 128/218 (58%), Gaps = 7/218 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN----GYMAVQVGAGEAK 57
R G++A K GMT + G RIP TVL + QV H + Y A+QV A + K
Sbjct: 97 RVGLIAVKRGMTSFFLPNGERIPATVLQVHTNQVSAHIGFGPDATESTYTALQVAAVDTK 156
Query: 58 VKN-VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTI 116
N V+K +RG + +S KK+ D L+P+G+ S +F GQ +DV +T
Sbjct: 157 SINLVTKQIRGHLKTAGISRGKKIIREFRVSSDALVPLGTQLSAVHFVPGQSIDVRAITR 216
Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM-GGNRVTVK 175
G GF G MKRH F GLRA+HGVSISHRSHGSTG QDPGRV+ KMAGRM G ++
Sbjct: 217 GHGFQGVMKRHGFHGLRASHGVSISHRSHGSTGANQDPGRVWPGTKMAGRMGGNKHGSIH 276
Query: 176 NLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
NL VV VD K+ LI VKG VPG K + ++D+ + +
Sbjct: 277 NLLVVRVDAKKDLIYVKGNVPGP-KGGNVTLQDARRPS 313
>gi|68474538|ref|XP_718642.1| likely mitochondrial ribosomal protein (E. coli L3) [Candida
albicans SC5314]
gi|46440421|gb|EAK99727.1| likely mitochondrial ribosomal protein (E. coli L3) [Candida
albicans SC5314]
Length = 293
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 100/220 (45%), Positives = 134/220 (60%), Gaps = 6/220 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G+ A K GM +N +G IP TVL +D+C+V+ ++ GY AV +G +
Sbjct: 66 RPGLFAIKRGMITWFNEKGEHIPATVLEVDSCEVLGYKLFKDFGYTAVIMGTIDKLKNVK 125
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDD-----LLPVGSVFSPSYFTVGQLVDVTGMTI 116
S F + VSPK+K+ EF+++ D+ L+PVG+ + YF+VGQ VDV G+T
Sbjct: 126 STNDLRIFETAKVSPKQKIGEFKIRSIDNDIESKLIPVGTELTADYFSVGQKVDVKGVTK 185
Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
GKGF+G MKR F G RATHG S +HR+ G+TG Q+PGRVF KKM GRMG T N
Sbjct: 186 GKGFAGVMKRWGFSGGRATHGTSKAHRTPGATGGNQNPGRVFPGKKMPGRMGHQNNTGFN 245
Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
LEV+ D + G+++VKG VPG KK S I V D+ K N
Sbjct: 246 LEVLHTDGEAGILIVKGNVPGPKK-SIIKVSDAIKEYGNS 284
>gi|238879545|gb|EEQ43183.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 293
Score = 179 bits (454), Expect = 3e-43, Method: Composition-based stats.
Identities = 100/220 (45%), Positives = 134/220 (60%), Gaps = 6/220 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G+ A K GM +N +G IP TVL +D+C+V+ ++ GY AV +G +
Sbjct: 66 RPGLFAIKRGMITWFNEKGEHIPATVLEVDSCEVLGYKLFKDFGYTAVIMGTIDKLKNVK 125
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDD-----LLPVGSVFSPSYFTVGQLVDVTGMTI 116
S F + VSPK+K+ EF+++ D+ L+PVG+ + YF+VGQ VDV G+T
Sbjct: 126 STNDLRIFETAKVSPKQKIGEFKIRSIDNDIESKLIPVGTELTADYFSVGQKVDVKGVTK 185
Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
GKGF+G MKR F G RATHG S +HR+ G+TG Q+PGRVF KKM GRMG T N
Sbjct: 186 GKGFAGVMKRWGFSGGRATHGTSKAHRTPGATGGNQNPGRVFPGKKMPGRMGHQNNTGFN 245
Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
LEV+ D + G+++VKG VPG KK S I V D+ K N
Sbjct: 246 LEVLHTDGEAGILIVKGNVPGPKK-SIIKVSDAIKEYGNS 284
>gi|11467717|ref|NP_050769.1| ribosomal protein L3 [Guillardia theta]
gi|3914660|sp|O46894|RK3_GUITH RecName: Full=50S ribosomal protein L3, chloroplastic
gi|3603042|gb|AAC35703.1| ribosomal protein L3 [Guillardia theta]
Length = 204
Score = 179 bits (453), Expect = 3e-43, Method: Composition-based stats.
Identities = 83/201 (41%), Positives = 121/201 (60%), Gaps = 2/201 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ G++ KLGMT +++ G IPVT+L + C V ++ K+ Y A+Q+G + K
Sbjct: 1 MKIGLLGTKLGMTQIFDDNGSAIPVTILKVGPCYVTNLKSDTKDNYNAIQIGYQQVDAKK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP G N+ P K L E++V + S F +GQ+V V+G++IGKGF
Sbjct: 61 LTKPQLGHLQVNNLPPLKHLKEYKVDAT-HTFTIAQQLDVSIFELGQIVSVSGVSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KRHNF THG S +HR GS G P +V K KKMAGR+GG++VT KNL VV
Sbjct: 120 AGTVKRHNFTRGPMTHG-SKNHREPGSIGQGSTPAKVHKGKKMAGRLGGHQVTTKNLTVV 178
Query: 181 SVDDKRGLILVKGCVPGAKKN 201
+D ++++KGCVPG + N
Sbjct: 179 HLDKDNNVLVLKGCVPGKRGN 199
>gi|51209943|ref|YP_063607.1| ribosomal protein L3 [Gracilaria tenuistipitata var. liui]
gi|68052932|sp|Q6B8V3|RK3_GRATL RecName: Full=50S ribosomal protein L3, chloroplastic
gi|50657697|gb|AAT79682.1| 50S ribosomal protein L3 [Gracilaria tenuistipitata var. liui]
Length = 205
Score = 179 bits (453), Expect = 3e-43, Method: Composition-based stats.
Identities = 72/207 (34%), Positives = 119/207 (57%), Gaps = 3/207 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ G++ +K+GMT +++ G+ +PVT+L L C + + ++ +GY A+Q+G +
Sbjct: 1 MKIGLLGKKIGMTQIFDPGGKALPVTILKLGPCLITDIKKMESHGYAAIQIGYVKVNGNK 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++K G + N+ P K + + +G + ++ Q + V+G +IGKGF
Sbjct: 61 LNKAQIGHLNKYNM-PLVKFLKEYKVASTENYQIGKWITVEDLSINQNISVSGTSIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KRHNF +HG S +HR GS G PG+VF KKMAGRMGG +VT++NL+++
Sbjct: 120 TGCIKRHNFSRGPMSHG-SKNHRQPGSIGAGTTPGKVFAGKKMAGRMGGKKVTIQNLKII 178
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVR 207
+ LI+VKG VPG N + +
Sbjct: 179 DIKINNNLIIVKGSVPGKPGN-IVSIY 204
>gi|261880882|ref|ZP_06007309.1| 50S ribosomal protein L3 [Prevotella bergensis DSM 17361]
gi|270332389|gb|EFA43175.1| 50S ribosomal protein L3 [Prevotella bergensis DSM 17361]
Length = 204
Score = 179 bits (453), Expect = 4e-43, Method: Composition-based stats.
Identities = 80/204 (39%), Positives = 118/204 (57%), Gaps = 5/204 (2%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ RK+GMT V++ +G+ +P TV+ C V +T++ +GY AVQ+G GEAK +K
Sbjct: 3 GLIGRKIGMTSVFSADGKNVPCTVIEAGPCVVTQVKTVENDGYEAVQIGFGEAKKSRTTK 62
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
PM G F +PKK L EF+ ++D +G + F V+V G + GKGF G
Sbjct: 63 PMAGIFKKAGTTPKKHLAEFKFEED---YNLGDAITVELFADADFVNVVGTSKGKGFQGV 119
Query: 124 MKRHNFG-GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRH F + THG R GS G P +VFK +M G+MGG+RV +NL+V+ V
Sbjct: 120 VKRHGFAGVGQRTHGQDDRARKPGSIGACSYPAKVFKGMRMGGQMGGDRVKTRNLKVLKV 179
Query: 183 DDKRGLILVKGCVPGAKKNSWILV 206
++ L++VKG G K S +L+
Sbjct: 180 IPEQNLLIVKGSFAGC-KGSTVLI 202
>gi|159485314|ref|XP_001700690.1| plastid ribosomal protein L3 [Chlamydomonas reinhardtii]
gi|158272032|gb|EDO97839.1| plastid ribosomal protein L3 [Chlamydomonas reinhardtii]
Length = 259
Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats.
Identities = 79/216 (36%), Positives = 114/216 (52%), Gaps = 6/216 (2%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDN-CQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
GV+ K GM + +G +P TV+ L+ V +T D +GY AVQ+G K V+
Sbjct: 45 GVLGTKAGMMSYFTEDGLCVPATVIALEEGNVVTQVKTQDTDGYNAVQIGYKATAEKRVT 104
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQK---DDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
KP G V P + L EF+++ + P ++ + G+ VD+ G+T+GKG
Sbjct: 105 KPELGHLKKAGVPPMRHLVEFKLKDRAAVEAYQPGQALDVAALLKEGEPVDIAGITVGKG 164
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KR + +HG S SHR HGS G P RVF KMAG+MG R+TVKN +
Sbjct: 165 FQGTIKRWHHKRGAMSHG-SKSHREHGSIGSATTPSRVFPGLKMAGQMGNVRMTVKNQSL 223
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
+ VD +R ++VKG VPG N + + + VN
Sbjct: 224 LKVDTERHALVVKGSVPGKVGN-VVEITPAKLVGVN 258
>gi|255022702|ref|ZP_05294688.1| 50S ribosomal protein L3 [Listeria monocytogenes FSL J1-208]
Length = 210
Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats.
Identities = 79/214 (36%), Positives = 121/214 (56%), Gaps = 5/214 (2%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
M G++ RK + IPVTV+ V+ +T++ +GY AVQ+G + +
Sbjct: 1 MTKGILGRKXXXXXXFLLKTDELIPVTVIEAAQNVVLQKKTVETDGYEAVQIGFEDKRAI 60
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+KP +G + N +PK+ + EFR D+ +G+ F G ++D TG++ GKG
Sbjct: 61 LSNKPEQGHVAKANTTPKRFIREFRDVNLDE-YEIGAEVKVDVFAEGDIIDATGVSKGKG 119
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KRH HG S HR GS G P RVFKNK + GRMGG ++T++NLE+
Sbjct: 120 FQGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKLLPGRMGGEQITIQNLEI 177
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
V VD ++ ++LVKG VPGAKK + + ++ + K+
Sbjct: 178 VKVDVEKNVLLVKGNVPGAKK-ALVQIKTATKAK 210
>gi|269958584|ref|YP_003328371.1| 50S ribosomal protein L3 [Anaplasma centrale str. Israel]
gi|269848413|gb|ACZ49057.1| 50S ribosomal protein L3 [Anaplasma centrale str. Israel]
Length = 232
Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats.
Identities = 105/220 (47%), Positives = 137/220 (62%), Gaps = 5/220 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ +K+G T V+ G R+PVT+L L++ VV + D +GY AV + G + +
Sbjct: 6 RVGLLMKKIGNTAVFGDSGARVPVTLLLLEDTLVVEVKRRDVHGYDAVVL--GVRRPGRL 63
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP + LFE RV D + GS S +F GQ VDV G +IG+GF+
Sbjct: 64 NKPQVCALRKKGIDVDCHLFESRVDAVDG-IEPGSRISVDHFFQGQFVDVAGRSIGRGFA 122
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRHNF GLRA+HGVSISHRS GSTG QDPGRVFK KKMAG MG + V+NL VV
Sbjct: 123 GVMKRHNFRGLRASHGVSISHRSQGSTGQCQDPGRVFKGKKMAGHMGCSMSVVQNLRVVL 182
Query: 182 VDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCKGKV 220
VD +R L++V+G VPG+ S++LVRD+ K V G V
Sbjct: 183 VDSERSLLVVEGTNVPGSC-GSYVLVRDAVKKPVPGGGNV 221
>gi|197294631|ref|YP_001799172.1| 50S ribosomal protein L3 [Candidatus Phytoplasma australiense]
gi|226730545|sp|B1VAE8|RL3_PHYAS RecName: Full=50S ribosomal protein L3
gi|171853958|emb|CAM11921.1| 50S ribosomal protein L3 [Candidatus Phytoplasma australiense]
Length = 221
Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats.
Identities = 78/224 (34%), Positives = 122/224 (54%), Gaps = 9/224 (4%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++N +G IP+T++ + V+ + + +GY A Q+G + K K
Sbjct: 1 MAQGILGKKIGMTQMFNEQGEIIPITIVDVSANVVLQQKNVAIDGYNATQIGFDDKKDKI 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDD----DLLPVGSVFSPSYFTVGQLVDVTGMTI 116
+KPM G F +PK+ + E +K++ L VG S F VG LVDVTG +
Sbjct: 61 TTKPMLGHFKKAKTTPKRFIKEIIFKKENISSLSALAVGDQVSCDLFQVGDLVDVTGTSK 120
Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
GKGF+G +KRHN THG S HR GS G + + K +MG VT++N
Sbjct: 121 GKGFAGVIKRHNQSRGPETHG-SRHHRRPGSMGPIKGKIKGKKLPG---QMGHQTVTIQN 176
Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
L + SVD+++ L L+KG VPG K +++++ + K +
Sbjct: 177 LVLFSVDNQKNLFLIKGSVPGPNKG-FVVIKSAVKKLSKEQANA 219
>gi|157134546|ref|XP_001656360.1| Mitochondrial 39S ribosomal protein L3 [Aedes aegypti]
gi|108870456|gb|EAT34681.1| Mitochondrial 39S ribosomal protein L3 [Aedes aegypti]
Length = 372
Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats.
Identities = 69/231 (29%), Positives = 110/231 (47%), Gaps = 15/231 (6%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH--------------RTLDKNGYM 47
R+GV+ARK+G ++ +G +I T+L + + VV + + KN Y
Sbjct: 105 RTGVIARKIGQYPLWMKDGTKIRTTLLQVIDNHVVKYIPPAEFNPPLEPRQKKNWKNPYG 164
Query: 48 AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107
+ VGA +K G F V PK+ L F V + LL G+ + ++F VG
Sbjct: 165 CLLVGAQSQDPSIFTKEYCGLFKDSGVLPKQHLCRFIVSPEAQLL-PGTPLNVTHFKVGD 223
Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167
VDV G T+ GF G +KRH F G+ A+HGV+ +HR G+ G + RV+ KM G M
Sbjct: 224 YVDVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRKPGNIGAGGEKARVWPGTKMPGHM 283
Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
G ++ L++ ++ K ++ V+G N + + D+ K
Sbjct: 284 GNRWRNLRGLKIWRINTKYNVMWVQGSNIAGDTNGLVYIYDTILPLRKYKE 334
>gi|86158411|ref|YP_465196.1| 50S ribosomal protein L3 [Anaeromyxobacter dehalogenans 2CP-C]
gi|109893409|sp|Q2IJD0|RL3_ANADE RecName: Full=50S ribosomal protein L3
gi|85774922|gb|ABC81759.1| LSU ribosomal protein L3P [Anaeromyxobacter dehalogenans 2CP-C]
Length = 236
Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats.
Identities = 79/226 (34%), Positives = 118/226 (52%), Gaps = 8/226 (3%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG---EAK 57
M +G++A+K+GMT ++ EG +PVTVL C VV +T +K+GY AV +G G E
Sbjct: 1 MSTGLLAKKVGMTQIFTPEGDCVPVTVLEAGPCTVVRRKTAEKDGYDAVVIGFGVVDEKH 60
Query: 58 VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPS-YFTVGQLVDVTGM 114
+SKP G F + + E RV+ L G V + F Q +DV G+
Sbjct: 61 AHRLSKPEVGVFKKAGTPIFRHVKEIRVKDAKLLGDLKAGDVLTVDKVFKANQRIDVAGV 120
Query: 115 TIGKGFSGAMKRHNFGGLRA-THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
T G+GF+G MKR N G + HR G+ G R+ PG+V+K K + G G + +T
Sbjct: 121 TKGRGFTGVMKRWNMKGAARDSSTAHEHHRHVGAIGQRKTPGKVWKGKHLPGHYGVDNIT 180
Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
++NL VV ++ ++ ++LV G VPG + V + K K K
Sbjct: 181 IQNLTVVGIEPEQNVLLVSGAVPGHADG-LLFVNTAAKGQPRIKQK 225
>gi|156363345|ref|XP_001626005.1| predicted protein [Nematostella vectensis]
gi|156212865|gb|EDO33905.1| predicted protein [Nematostella vectensis]
Length = 264
Score = 178 bits (451), Expect = 6e-43, Method: Composition-based stats.
Identities = 81/220 (36%), Positives = 121/220 (55%), Gaps = 7/220 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNG----YMAVQVGAGEAK 57
R+G V KLGM+ ++ +GRR+PVT++ + +C+VV R +G +QVGA
Sbjct: 8 RTGAVGVKLGMSALWLKDGRRLPVTLIQIKDCEVVQARVAKGHGGRDPQTELQVGAVNKL 67
Query: 58 V-KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTI 116
+ K G F +V PK+K+ F V D LL G+ + ++F GQ V + G+T
Sbjct: 68 ELNQIGKAQFGHFKRFSVRPKRKVCSFPVTP-DALLTPGTPITAAHFYPGQYVKIQGVTK 126
Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
KGF G MKR GG A+HG S +HR G+TG QDPGRV+ KKMAG MG T+
Sbjct: 127 DKGFQGVMKRWGMGGQPASHGQSKTHRKMGATGGGQDPGRVWPGKKMAGHMGNKNCTLHA 186
Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
+ V ++ K ++ V+G PG ++ + D++K +
Sbjct: 187 VRVHRINTKYNVLYVQGQCPGP-TGGFLKISDAWKRHPHA 225
>gi|189501654|ref|YP_001957371.1| 50S ribosomal protein L3 [Candidatus Amoebophilus asiaticus 5a2]
gi|226725126|sp|B3EUM3|RL3_AMOA5 RecName: Full=50S ribosomal protein L3
gi|189497095|gb|ACE05642.1| hypothetical protein Aasi_0197 [Candidatus Amoebophilus asiaticus
5a2]
Length = 210
Score = 178 bits (451), Expect = 6e-43, Method: Composition-based stats.
Identities = 76/208 (36%), Positives = 116/208 (55%), Gaps = 4/208 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +KLGMT +Y+ GR +P TV+ C V + ++K+GY AVQ+G + K KN
Sbjct: 1 MLGIIGKKLGMTTLYDEAGRSVPCTVITGGPCVVTQIKNIEKDGYTAVQLGYDDKKEKNT 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDD---DLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
KP+ G F +PK+KL EF+ + ++ ++ F G+ VD G++ GK
Sbjct: 61 VKPLMGHFQKAQTTPKRKLVEFKEFGKELGKEIQLGQTIQLHDIFVEGEYVDAIGLSKGK 120
Query: 119 GFSGAMKRHNFG-GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
GF G +KRH F +HG R+ G+ G P RVFK +MAGR GG RV + NL
Sbjct: 121 GFQGVVKRHGFSGVGGKSHGQHNRERAPGAIGACSTPSRVFKGMRMAGRTGGQRVKITNL 180
Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWIL 205
++ + ++ ++++ G VPGAK IL
Sbjct: 181 RIMKLVPEKNILVISGSVPGAKNGYIIL 208
>gi|195059563|ref|XP_001995662.1| GH17642 [Drosophila grimshawi]
gi|193896448|gb|EDV95314.1| GH17642 [Drosophila grimshawi]
Length = 373
Score = 178 bits (451), Expect = 6e-43, Method: Composition-based stats.
Identities = 72/230 (31%), Positives = 111/230 (48%), Gaps = 15/230 (6%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49
R G++ARK+G ++ G R+ T+L + + V+ + ++ N Y V
Sbjct: 109 RCGLIARKIGQYPLWLKNGERVRTTLLQVVDNHVIKYIPPEEYRPTQRPNVHHLNKYGCV 168
Query: 50 QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109
VGA ++K G F V PKK L F V L G+ + +F VG+ V
Sbjct: 169 LVGAECTNPALLTKEYCGLFRDSGVMPKKNLARFIVSPQAA-LAAGTPLNVGHFRVGEFV 227
Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169
DV G T+ GF G +KRH F G+ A+HGV+ +HR G+ G + GRV+ KM G MG
Sbjct: 228 DVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHMGN 287
Query: 170 NRVTVKNLEVVSVDDKRGLILVKGC-VPGAKKNSWILVRDSFKSAVNCKG 218
+K L + ++ K ++ V+G VPG+ N + + D+ K
Sbjct: 288 RWRIIKGLRIWRINTKYNVMWVQGSAVPGS-TNGLVYIYDTILPLRKPKD 336
>gi|283780374|ref|YP_003371129.1| 50S ribosomal protein L3 [Pirellula staleyi DSM 6068]
gi|283438827|gb|ADB17269.1| ribosomal protein L3 [Pirellula staleyi DSM 6068]
Length = 232
Score = 178 bits (451), Expect = 6e-43, Method: Composition-based stats.
Identities = 86/233 (36%), Positives = 127/233 (54%), Gaps = 25/233 (10%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT +Y+ G IPVTV+ C+V+ +TL+++GY AVQ+G + +
Sbjct: 1 MTKGILGRKVGMTQIYDEAGNAIPVTVVEAGPCRVLQLKTLERDGYEAVQLGFLDKPRRL 60
Query: 61 VSKPMRGFFS-------------------SVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS 101
S+ RG + PK+ + EFR D VG +
Sbjct: 61 ASRSERGHVAALESKRAKRRAAAGVVAVAKAACEPKRFVREFRGSADG--FTVGQDVTVE 118
Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP---GRVF 158
+ VDVTG++ G+GFSGAMKRHNF G RATHGV HR G TG GR+
Sbjct: 119 ALEGVKAVDVTGISKGRGFSGAMKRHNFAGQRATHGVKKVHRHMGGTGALASNRGGGRMK 178
Query: 159 KNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
K KKM G+ G R+T +N+++V VD + L+L+ G VPG + + +++R++ K
Sbjct: 179 KGKKMPGQYGSARITTRNIKLVRVDKENNLLLINGPVPGPQ-GAMVIIRETNK 230
>gi|197122296|ref|YP_002134247.1| 50S ribosomal protein L3 [Anaeromyxobacter sp. K]
gi|220917078|ref|YP_002492382.1| ribosomal protein L3 [Anaeromyxobacter dehalogenans 2CP-1]
gi|226725127|sp|B4UAM2|RL3_ANASK RecName: Full=50S ribosomal protein L3
gi|254803648|sp|B8J817|RL3_ANAD2 RecName: Full=50S ribosomal protein L3
gi|196172145|gb|ACG73118.1| ribosomal protein L3 [Anaeromyxobacter sp. K]
gi|219954932|gb|ACL65316.1| ribosomal protein L3 [Anaeromyxobacter dehalogenans 2CP-1]
Length = 236
Score = 178 bits (451), Expect = 6e-43, Method: Composition-based stats.
Identities = 81/226 (35%), Positives = 119/226 (52%), Gaps = 8/226 (3%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG---EAK 57
M +G++A+K+GMT ++ EG +PVTVL C VV +T +K+GY AV +G G E
Sbjct: 1 MSTGLLAKKVGMTQIFTPEGDCVPVTVLEAGPCTVVRRKTAEKDGYDAVVIGFGVVDEKH 60
Query: 58 VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL--LPVGSVFSPS-YFTVGQLVDVTGM 114
+SKP G F + + E RV+ L L G V + F Q +DV G+
Sbjct: 61 AHRLSKPEVGVFKKAGTPIFRHVKEIRVKDAKQLGDLKAGDVLTVDKVFKANQRIDVAGV 120
Query: 115 TIGKGFSGAMKRHNFGGLRA-THGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
T G+GF+G MKR N G + HR G+ G R+ PG+V+K K + G G + VT
Sbjct: 121 TKGRGFTGVMKRWNMKGAARDSSTAHEHHRHVGAIGQRKTPGKVWKGKHLPGHYGVDNVT 180
Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
++NL VV ++ ++ ++LV G VPG + V + K K K
Sbjct: 181 IQNLTVVGIEAEQNVLLVSGAVPGHADG-LLFVNTAAKGQPRIKQK 225
>gi|283794897|ref|YP_003359250.1| ribosomal protein L3 [Cryptomonas paramecium]
gi|253981869|gb|ACT46786.1| ribosomal protein L3 [Cryptomonas paramecium]
Length = 210
Score = 177 bits (450), Expect = 8e-43, Method: Composition-based stats.
Identities = 86/206 (41%), Positives = 121/206 (58%), Gaps = 3/206 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ K+GMT V++ G IP T++ + C V +T+ K GY ++Q+G +
Sbjct: 3 MNFGILGTKVGMTNVFDPSGVAIPGTIVKVGPCIVTQVKTVPKEGYSSIQLGYFSVAKAS 62
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+SKP G N + L EFRV D+ L +G + S F+VG V V G ++GKGF
Sbjct: 63 LSKPELGHLKISNSQAVRYLREFRVDSPDENL-LGQEVTVSKFSVGDRVSVAGKSVGKGF 121
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
SG +KRH+F THG S +HR GS G PGRVF K+MAGR+GG +VT+KNL VV
Sbjct: 122 SGTVKRHHFTRGPMTHG-SKNHREPGSIGMGTTPGRVFPGKRMAGRLGGKKVTIKNLRVV 180
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
V + +++KG VPG KK S + +
Sbjct: 181 FVSLENNFLVLKGSVPG-KKGSLLRI 205
>gi|47459070|ref|YP_015932.1| 50S ribosomal protein L3 [Mycoplasma mobile 163K]
gi|81828477|sp|Q6KI55|RL3_MYCMO RecName: Full=50S ribosomal protein L3
gi|47458399|gb|AAT27721.1| 50S ribosomal protein l3 [Mycoplasma mobile 163K]
Length = 297
Score = 177 bits (449), Expect = 9e-43, Method: Composition-based stats.
Identities = 77/219 (35%), Positives = 122/219 (55%), Gaps = 6/219 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT +Y +G ++PVTV+ + V K+GY+A+Q+GA + K +
Sbjct: 1 MKGILGQKIGMTQIYTAQGNKVPVTVIEVKPNVVTHKFENTKDGYVALQLGAFDQKERKF 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
KP G F N +PK+ + E R + D +G + F G+LVDVTG++ GKGF+
Sbjct: 61 KKPEIGHFKKSNTTPKRFVKEIR---NMDGYNLGDLVKADIFKSGELVDVTGISKGKGFA 117
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP--GRVFKNKKMAGRMGGNRVTVKNLEV 179
G +KRHN +HG + TG D +V K M G +G + T++NLEV
Sbjct: 118 GTIKRHNQKIGPKSHGGGGGSKPVRQTGSIGDIAGNKVLKGMTMPGHLGNVQRTIQNLEV 177
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
V VD K ++LVKG VPG KN +++++ + K+ + +
Sbjct: 178 VKVDIKNNILLVKGSVPGP-KNCFLIIKSAIKNLPSREA 215
>gi|327274961|ref|XP_003222243.1| PREDICTED: 39S ribosomal protein L3, mitochondrial-like [Anolis
carolinensis]
Length = 329
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 77/210 (36%), Positives = 117/210 (55%), Gaps = 5/210 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NG-YMAVQVGAGEAKVK 59
R G++A KLGM ++ +G ++ VT+L + +C V+ H ++ +G Y A+ VGA
Sbjct: 78 RVGIIAVKLGMMPLWTKKGEKLAVTLLQVQDCHVIRHIPKEESDGKYPALIVGAKNVSQF 137
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
S + + +V + K+K+ FRV ++ ++ G+ ++F GQ VDVT TIGKG
Sbjct: 138 QKSVSILEMYRAVGLPVKQKISTFRVTENA-IIKPGTPLYAAHFRPGQYVDVTAKTIGKG 196
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G MKR F G A+HG + +HR G+ + +VFK KKM G++G T K L+V
Sbjct: 197 FQGVMKRWGFKGQPASHGQTKTHRRPGAISNSK-VAKVFKGKKMPGQLGNWYRTTKGLKV 255
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
V K +I V G VPG +N + V DS
Sbjct: 256 WRVSTKFNVIYVHGSVPG-HRNCLVKVSDS 284
>gi|302842094|ref|XP_002952591.1| plastid/chloroplast ribosomal protein L3 [Volvox carteri f.
nagariensis]
gi|300262230|gb|EFJ46438.1| plastid/chloroplast ribosomal protein L3 [Volvox carteri f.
nagariensis]
Length = 259
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 81/218 (37%), Positives = 111/218 (50%), Gaps = 6/218 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDN-CQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
GV+ K GM + G +P TV+ L+ V +T D +GY AVQVG +
Sbjct: 43 SLGVLGTKAGMMSYFTENGLCVPATVIALEEGNVVTQVKTEDTDGYNAVQVGYKAVAERK 102
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQK---DDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
V+KP G V P + L EF+++ + P + S G+ VD+ G+T+G
Sbjct: 103 VTKPELGHLKKAGVQPMRHLVEFKLKDRATVESYQPGQELDVSSLLKEGEAVDIAGVTVG 162
Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
KGF G +KR + THG S SHR HGS G P RVF KMAG+MG R TVKN
Sbjct: 163 KGFQGTIKRWHHKRGAMTHG-SKSHREHGSIGSATTPSRVFPGLKMAGQMGNVRATVKNQ 221
Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
++ VD +R ++VKG VPG N + + + VN
Sbjct: 222 TLLKVDSERRALIVKGSVPGKVGN-VVEITPAKLVGVN 258
>gi|194246733|ref|YP_002004372.1| 50S ribosomal protein L3 [Candidatus Phytoplasma mali]
gi|254803686|sp|B3QZZ1|RL3_PHYMT RecName: Full=50S ribosomal protein L3
gi|193807090|emb|CAP18528.1| 50S ribosomal protein L3 [Candidatus Phytoplasma mali]
Length = 219
Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats.
Identities = 71/219 (32%), Positives = 128/219 (58%), Gaps = 9/219 (4%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V++ +G IP+T++ + + ++ +++KNGY++ Q+G + K
Sbjct: 1 MAKGILGRKIGMTQVFDEKGSLIPITIVDVSDNVILQQNSVEKNGYLSTQLGFSSKREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFR----VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTI 116
+KP G F + SPK+ + E R ++ + L +G+ + F G +VDV G++
Sbjct: 61 STKPALGHFKNAKTSPKRFIKEIRFLPGIKNELSELDLGTSLKTNLFQPGDIVDVIGISK 120
Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
GKGFSG++KRHN +HG S HR GS G + + K +MG VT++N
Sbjct: 121 GKGFSGSIKRHNQSEGPKSHG-SRYHRRPGSMGPIKGKIKGKKLPG---QMGHQTVTLQN 176
Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
L++ S+D ++ L L+KG +PG +K +++++ + K+ +
Sbjct: 177 LKINSIDHEQELFLIKGSIPGPRKG-FVMIKTAIKTVIK 214
>gi|260942335|ref|XP_002615466.1| hypothetical protein CLUG_04349 [Clavispora lusitaniae ATCC 42720]
gi|238850756|gb|EEQ40220.1| hypothetical protein CLUG_04349 [Clavispora lusitaniae ATCC 42720]
Length = 279
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 100/210 (47%), Positives = 137/210 (65%), Gaps = 2/210 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ K M + G + TV+ +D+C+V+ +++++K+GY AV +G + K+KNV
Sbjct: 61 RPGLLGIKRDMITWFTESGEQFGATVIEVDSCEVIANKSVEKDGYSAVLMGQVD-KLKNV 119
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
S+ S VSPK K EFRV+ DD ++ G+ + YF VGQLVDV ++ GKGF+
Sbjct: 120 SRYHVKLCSDAGVSPKAKFGEFRVRTDDGIISPGTEITADYFAVGQLVDVKAVSKGKGFA 179
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRH F GLRATHGVS+SHRS GS G QDPGRV KKMAGRMGG TV N EV+
Sbjct: 180 GVMKRHGFKGLRATHGVSVSHRSAGSMGATQDPGRVLPGKKMAGRMGGRNCTVFNNEVLH 239
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
D + G+++VKG +PG K ++ V D+ K
Sbjct: 240 ADGEAGILVVKGQIPGP-KGCFVKVADAKK 268
>gi|326922075|ref|XP_003207277.1| PREDICTED: 39S ribosomal protein L3, mitochondrial-like [Meleagris
gallopavo]
Length = 348
Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats.
Identities = 75/211 (35%), Positives = 110/211 (52%), Gaps = 5/211 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNG--YMAVQVGAGEAKVK 59
R GVVA KLGM ++ G++ VT+L + +C V+ + + + +G + VG
Sbjct: 97 RVGVVAVKLGMMPIWTKSGKKHAVTLLKVQDCHVLKYISKEDSGGKRAKLLVGGKNVSPF 156
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
S+ F V K+K+ F V DD ++ G+ ++F GQ+VDVT TIGKG
Sbjct: 157 FKSEAEMEIFREAGVPRKQKVTSFDVT-DDAIIKPGTPLYAAHFRPGQIVDVTAKTIGKG 215
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KR F G A+HG + +HR G+ + RVF KKM G+MG T L+V
Sbjct: 216 FQGVVKRWGFKGQPASHGQTKTHRRPGAISTNK-VSRVFPGKKMPGKMGNIYRTSFALKV 274
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
++ K +I V G VPG N + VRD+
Sbjct: 275 WRINTKHDIIYVHGSVPG-HTNCLVKVRDTK 304
>gi|258646053|ref|ZP_05733522.1| 50S ribosomal protein L3 [Dialister invisus DSM 15470]
gi|260403423|gb|EEW96970.1| 50S ribosomal protein L3 [Dialister invisus DSM 15470]
Length = 213
Score = 175 bits (445), Expect = 3e-42, Method: Composition-based stats.
Identities = 87/216 (40%), Positives = 131/216 (60%), Gaps = 5/216 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M ++ KLGM+ V+ G +PVTV+ + VV +T++ +GY AVQ+G G K K+
Sbjct: 1 MSKAILGTKLGMSQVFAENGDLVPVTVVEVLPNVVVGVKTVETDGYNAVQIGYGAVKEKH 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+++P++G F + P K L E+R+ + + VG + F G+ VDV G++ GKGF
Sbjct: 61 LTRPVKGQFEKAGIDPVKYLREYRLAEKPE-YTVGQTLAADIFAAGEFVDVIGISRGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGS--TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
+G +KR N +HG S +HR S G+VFK KKM G++GG+RVTV+NLE
Sbjct: 120 AGTIKRWNHQRGPESHG-SKNHRQTASLGARMSGGGGKVFKGKKMPGQLGGDRVTVQNLE 178
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VV VD R ++LVKG +PGA K S ++V+ + KS+
Sbjct: 179 VVRVDTDRSILLVKGGIPGA-KGSLVMVKTAVKSSK 213
>gi|149018712|gb|EDL77353.1| mitochondrial ribosomal protein L3 (predicted), isoform CRA_b
[Rattus norvegicus]
Length = 304
Score = 175 bits (445), Expect = 3e-42, Method: Composition-based stats.
Identities = 71/211 (33%), Positives = 110/211 (52%), Gaps = 5/211 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD-KNGYMAVQVGAGEAKVK- 59
R G++A KLGM ++ +G++ VT+L + +C V+ + + NG A G+ +
Sbjct: 96 RVGLIALKLGMMPLWTKDGQKHAVTLLQVQDCHVLKYTPKEDHNGKTAALTVGGKTGSRL 155
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+ F+ + + PK+ + F V D+ ++ G+ ++F GQ VDVT TIGKG
Sbjct: 156 YKPNSILEFYRDLGLPPKQTIKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGKG 214
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G MKR F G A+HG + +HR G+ D RV+ KM G+MG TV L+V
Sbjct: 215 FQGVMKRWGFKGQPASHGQTKTHRRPGAIST-GDIARVWPGTKMPGQMGNQNRTVYGLKV 273
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
V+ K +I V G VPG +N + V +
Sbjct: 274 WRVNTKHNIIYVNGSVPG-HRNCLVKVGTTV 303
>gi|225716532|gb|ACO14112.1| Mitochondrial 39S ribosomal protein L3 [Esox lucius]
Length = 341
Score = 175 bits (445), Expect = 3e-42, Method: Composition-based stats.
Identities = 81/211 (38%), Positives = 118/211 (55%), Gaps = 4/211 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAVQVGAGE-AKVK 59
R G+VA KLGM V+ G R VT+L + +C V+ + + ++ +G+ A + G+ A
Sbjct: 91 RVGLVAVKLGMAPVWTKMGDRQVVTLLQVQDCHVLKYLSKEEYDGHTAALLVGGKNASSF 150
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
S+ F V PK+K+ F+V D+ ++ G+ ++F GQ VDVT TIG G
Sbjct: 151 YKSQEEMEMFRFAGVPPKQKISTFKVS-DNAIIKPGTPLYAAHFRPGQYVDVTAKTIGMG 209
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G MKR+ F G ATHG + +HR G++G DP +VFK +KM GRMG T L+V
Sbjct: 210 FQGVMKRYGFKGQPATHGQTKTHRRPGASGPGGDPAKVFKGRKMPGRMGNVFDTAHGLKV 269
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
V+ + +I V G VPG +N + V DS
Sbjct: 270 WRVNTRYNIIYVHGTVPG-HRNCILKVADSI 299
>gi|56417003|ref|YP_154077.1| 50S ribosomal protein L3 [Anaplasma marginale str. St. Maries]
gi|222475371|ref|YP_002563788.1| 50S ribosomal protein L3 (rplC) [Anaplasma marginale str. Florida]
gi|254995180|ref|ZP_05277370.1| 50S ribosomal protein L3 [Anaplasma marginale str. Mississippi]
gi|255003354|ref|ZP_05278318.1| 50S ribosomal protein L3 [Anaplasma marginale str. Puerto Rico]
gi|255004478|ref|ZP_05279279.1| 50S ribosomal protein L3 [Anaplasma marginale str. Virginia]
gi|56388235|gb|AAV86822.1| 50S ribosomal protein L3 [Anaplasma marginale str. St. Maries]
gi|222419509|gb|ACM49532.1| 50S ribosomal protein L3 (rplC) [Anaplasma marginale str. Florida]
Length = 232
Score = 175 bits (445), Expect = 3e-42, Method: Composition-based stats.
Identities = 106/220 (48%), Positives = 138/220 (62%), Gaps = 5/220 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ +K+G T V+ G R+PVT+L L++ VV ++ D +GY AV + G + +
Sbjct: 6 RVGLLMKKVGSTAVFGDAGARVPVTLLLLEDTFVVDVKSRDVHGYNAVVL--GVRRPGRL 63
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP + LFE RV D + P G V +F GQ VDV G +IG+GF+
Sbjct: 64 NKPQICALRKKGIDVDCHLFESRVDTVDGVEPGGRVL-VDHFFQGQFVDVAGRSIGRGFA 122
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRHNFGGLRA+HGVSISHRS GSTG QDPGRVFK KKMAG MG V+NL VV
Sbjct: 123 GVMKRHNFGGLRASHGVSISHRSQGSTGQCQDPGRVFKGKKMAGHMGHTMSVVQNLRVVL 182
Query: 182 VDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCKGKV 220
VD +R L++V+G VPG S++LVRD+ K V +G V
Sbjct: 183 VDSERSLLVVEGTNVPGPC-GSYVLVRDAVKKPVPREGGV 221
>gi|57530745|ref|NP_001006366.1| 39S ribosomal protein L3, mitochondrial [Gallus gallus]
gi|53128932|emb|CAG31347.1| hypothetical protein RCJMB04_5e20 [Gallus gallus]
Length = 348
Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats.
Identities = 76/211 (36%), Positives = 111/211 (52%), Gaps = 5/211 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQ--VGAGEAKVK 59
R GVVA KLGM ++ G++ VT+L + +C V+ + + + +G + VG
Sbjct: 97 RVGVVAVKLGMMPIWTKSGKKHAVTLLKVQDCHVLKYVSKEDSGGKTAKLLVGGKNVSPF 156
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+ S+ F V K+K+ F V DD ++ G+ ++F GQ+VDVT TIGKG
Sbjct: 157 SKSEAEMEIFREAGVPRKQKVTTFNVT-DDAIIKPGTPLYAAHFRPGQIVDVTAKTIGKG 215
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G MKR F G A+HG + +HR G+ + RVF KKM G+MG T L+V
Sbjct: 216 FQGVMKRWGFKGQPASHGQTKTHRRPGAISTNK-VSRVFPGKKMPGKMGNIYRTSFGLKV 274
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
++ K +I V G VPG N + VRD+
Sbjct: 275 WRINTKHDIIYVHGSVPG-HTNCLVKVRDTK 304
>gi|294654997|ref|XP_002770064.1| DEHA2B02684p [Debaryomyces hansenii CBS767]
gi|199429613|emb|CAG85072.4| DEHA2B02684p [Debaryomyces hansenii]
Length = 278
Score = 175 bits (443), Expect = 4e-42, Method: Composition-based stats.
Identities = 97/210 (46%), Positives = 137/210 (65%), Gaps = 2/210 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ K GM Y +G++ TV+ +DNC+V+ ++T+D +GY +V +G + K+KN+
Sbjct: 61 RPGLLGVKRGMITWYTDDGKQFGATVIEIDNCEVIENKTVDTHGYTSVLLGQCD-KLKNI 119
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+ F VSPKK + EFR++ + L+PVG+ + YF VGQLVDV +T GKGF+
Sbjct: 120 TDKNLRKFQEAGVSPKKHIGEFRIRDESGLIPVGTELTADYFAVGQLVDVKAITKGKGFA 179
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRH F GL+A+HGVS +HRS GS G Q PGRV KKMAGRMGG TV N EV+
Sbjct: 180 GVMKRHGFKGLKASHGVSKAHRSAGSMGATQTPGRVLPGKKMAGRMGGKSCTVFNNEVLH 239
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
D + G I++KG +PG S++ + D+ K
Sbjct: 240 ADAEAGFIVLKGQIPGP-NRSFVRISDAQK 268
>gi|154274402|ref|XP_001538052.1| hypothetical protein HCAG_05657 [Ajellomyces capsulatus NAm1]
gi|150414492|gb|EDN09854.1| hypothetical protein HCAG_05657 [Ajellomyces capsulatus NAm1]
Length = 265
Score = 175 bits (443), Expect = 5e-42, Method: Composition-based stats.
Identities = 86/195 (44%), Positives = 130/195 (66%), Gaps = 2/195 (1%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
+R+G +A K GMT +++ G+RIP T+L LD QV+ H+TL KNGY AVQ+G G +
Sbjct: 71 LRTGTLAIKKGMTAIFDLETGKRIPCTILQLDRVQVISHKTLKKNGYYAVQIGCGWKHER 130
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V++PM G F++ V+PK+ + EFRV+ ++ LLP+G + + ++F GQ VD + G G
Sbjct: 131 AVTRPMLGHFAANGVAPKRHIHEFRVKDENGLLPIGEMINANWFQEGQYVDARSNSRGMG 190
Query: 120 FSGAMKRHNFGGLRATHGVSISHR-SHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
F+G MKRH F G +HGVS++HR S + RV+ KKMAG MG +VT++NL+
Sbjct: 191 FAGVMKRHGFHGQDRSHGVSLTHRSMGSSGPGQGGGSRVYPGKKMAGNMGNKQVTLQNLK 250
Query: 179 VVSVDDKRGLILVKG 193
V+ VD ++G+++V G
Sbjct: 251 VLKVDAEKGIVVVNG 265
>gi|126274899|ref|XP_001387659.1| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|126213529|gb|EAZ63636.1| predicted protein [Pichia stipitis CBS 6054]
Length = 262
Score = 174 bits (442), Expect = 6e-42, Method: Composition-based stats.
Identities = 93/210 (44%), Positives = 136/210 (64%), Gaps = 2/210 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ K GM + G + TV+ +D+C+V+ +T++ +GY +V +G + K+KNV
Sbjct: 42 RPGLLGIKRGMISWFTEAGEQFAATVIEIDSCEVIKQKTVESDGYWSVLLGQID-KLKNV 100
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
++ F + VSPK+ + EFRV+ L+PVG+ YF+VGQLVD+ ++ GKGF+
Sbjct: 101 NEKELVKFEAAGVSPKQNIGEFRVRDKSGLIPVGTELKADYFSVGQLVDIKAVSKGKGFA 160
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRH F GL A+HGVS+SHRS G G QDPGRV KKMAGRMGG TV N EV+
Sbjct: 161 GVMKRHGFKGLNASHGVSLSHRSAGGMGGNQDPGRVLPGKKMAGRMGGRNCTVFNNEVLH 220
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
D + G+++VKG +PG + ++ + D+ K
Sbjct: 221 ADGEAGILVVKGQIPGPARG-FVKILDATK 249
>gi|289614454|emb|CBI58738.1| unnamed protein product [Sordaria macrospora]
Length = 365
Score = 174 bits (442), Expect = 6e-42, Method: Composition-based stats.
Identities = 96/219 (43%), Positives = 128/219 (58%), Gaps = 17/219 (7%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
+R+GV+A K GMT G RIP TVL LD Q+V ++T KNGY AVQ+G EAK
Sbjct: 102 LRTGVLAVKKGMTVFMGKTGARIPCTVLQLDRVQIVANKTRAKNGYWAVQLGYYEAK--- 158
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+ PK+ L EF+V+ D LLPVG P +F VGQ VDV G+T G GF
Sbjct: 159 ------------GIPPKQTLAEFKVRNQDGLLPVGVQLFPDWFHVGQRVDVRGITRGMGF 206
Query: 121 SGAMKRHNFGGLRATHGVSISHRSH-GSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
+G MK+H F G A+HG S +HR+ G + RV KKM GRMG + TV+NL V
Sbjct: 207 AGGMKKHGFSGQEASHGNSKNHRTIGSVGGSQGSGSRVLPGKKMPGRMGAQQHTVQNLPV 266
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+ VD++ G+++VKG V G K + + V+D+ K A +
Sbjct: 267 LMVDNELGIVVVKGAVAG-HKGAVVKVQDAVKKAPPPEE 304
>gi|33236514|gb|AAP98602.1| ribosomal protein L3 [Chlamydophila pneumoniae TW-183]
Length = 235
Score = 174 bits (442), Expect = 6e-42, Method: Composition-based stats.
Identities = 76/220 (34%), Positives = 114/220 (51%), Gaps = 11/220 (5%)
Query: 1 MR--SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58
MR V+ +K GM +++ +G + +V+ ++ V +T + +GY ++Q+GA E
Sbjct: 17 MRSHISVMGKKEGMIHIFDKDGSLVACSVIRVEPNVVTQIKTKESDGYFSLQIGAEEMNA 76
Query: 59 K------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111
VSKP G + L E R ++ + + +G F F VDV
Sbjct: 77 PAHTITKRVSKPKLGHLRKAGGRVFRFLKEVRGSEEALNGVSLGDAFGLEVFEDVSSVDV 136
Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171
G++ GKGF G MK+ F G +HG S HR GS G R PGR F K MG
Sbjct: 137 RGISKGKGFQGVMKKFGFRGGPGSHG-SGFHRHAGSIGMRSTPGRCFPGSKRPSHMGAEN 195
Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
VTVKNLEV+ VD ++ ++LVKG +PGA + S ++V+ S +
Sbjct: 196 VTVKNLEVIKVDLEKKVLLVKGAIPGA-RGSIVIVKHSSR 234
>gi|162450261|ref|YP_001612628.1| 50S ribosomal protein L3 [Sorangium cellulosum 'So ce 56']
gi|254803690|sp|A9FQE0|RL3_SORC5 RecName: Full=50S ribosomal protein L3
gi|161160843|emb|CAN92148.1| 50S ribosomal protein L3 [Sorangium cellulosum 'So ce 56']
Length = 232
Score = 174 bits (442), Expect = 6e-42, Method: Composition-based stats.
Identities = 72/211 (34%), Positives = 111/211 (52%), Gaps = 4/211 (1%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ +K+GMT ++N G + TV+ C V+ RTL+K+GY A+ +G GE K+ +K
Sbjct: 6 GIIGKKIGMTQIFNETGEVLRCTVVQAG-CVVIGKRTLEKDGYSALILGLGERAEKHTTK 64
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKD-DDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFS 121
P+ G + +PK+ + E R + +G+ F VGQ VD G + G+GFS
Sbjct: 65 PVAGAYKKSGQTPKRIVRELRCSPEHAAKYEIGTTLKVDEIFEVGQRVDAQGRSRGRGFS 124
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G ++R +F G +HG R GS G PGR KM G G V+ NL++
Sbjct: 125 GVIRRWSFAGAVNSHGTHEYFRHGGSIGTNMTPGRTLPGLKMPGHYGDETVSALNLKIAK 184
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+ + LIL++G VPG KN + +R + K
Sbjct: 185 LLPEDNLILIEGPVPGP-KNQVVTIRGAVKK 214
>gi|195398797|ref|XP_002058007.1| GJ15729 [Drosophila virilis]
gi|194150431|gb|EDW66115.1| GJ15729 [Drosophila virilis]
Length = 372
Score = 174 bits (441), Expect = 7e-42, Method: Composition-based stats.
Identities = 72/230 (31%), Positives = 109/230 (47%), Gaps = 15/230 (6%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH------------RTLDKNGYMAV 49
R G++ARK+G ++ G R+ T+L + + VV + R + Y V
Sbjct: 109 RCGLIARKIGQYPLWLKNGERVRTTLLQVVDNHVVKYIPPGEYTPAQRPRVKHLDRYGCV 168
Query: 50 QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109
VGA ++K G F V P K L F V L G+ + +F VG+ V
Sbjct: 169 LVGAESTNPALLTKEYCGIFRDSGVMPTKNLARFIVSPQAA-LAPGTPLNVGHFRVGEFV 227
Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169
DV G T+ GF G +KRH F G+ A+HGV+ +HR G+ G + GRV+ KM G MG
Sbjct: 228 DVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRPGNIGGGGEKGRVWPGTKMPGHMGN 287
Query: 170 NRVTVKNLEVVSVDDKRGLILVKGC-VPGAKKNSWILVRDSFKSAVNCKG 218
+K L + ++ K ++ V+G VPG+ N + + D+ K
Sbjct: 288 RWRIIKGLRIWRINTKYNVMWVQGSAVPGS-TNGLVYIYDTVLPLRKPKE 336
>gi|116199553|ref|XP_001225588.1| hypothetical protein CHGG_07932 [Chaetomium globosum CBS 148.51]
gi|88179211|gb|EAQ86679.1| hypothetical protein CHGG_07932 [Chaetomium globosum CBS 148.51]
Length = 380
Score = 174 bits (441), Expect = 7e-42, Method: Composition-based stats.
Identities = 100/219 (45%), Positives = 134/219 (61%), Gaps = 2/219 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
+R+GV+A K GMT G RI TVL LD Q V+++T ++GY AVQVG GE N
Sbjct: 86 LRAGVLAVKKGMTVFMGRTGARIACTVLQLDRVQTVLNKTRARHGYWAVQVGMGERNPGN 145
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
V P+ G++ + ++PK+ L EFRV+ LLPVG P +F VGQ VDV + G GF
Sbjct: 146 VGAPLLGYYEAKGMAPKEVLAEFRVRDQSGLLPVGVQLMPDWFHVGQRVDVRSNSRGMGF 205
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP-GRVFKNKKMAGRMGGNRVTVKNLEV 179
+G MKRH F G A+HG S +HR+ GS G Q RV KKM GRMG RVT++NL V
Sbjct: 206 AGGMKRHGFSGQEASHGNSKNHRTIGSAGPSQGSGSRVLPGKKMPGRMGNQRVTIQNLPV 265
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+ D++ G+++VKGCV G K + I V+D+ K +
Sbjct: 266 LIADNELGILVVKGCVAGP-KGAVIQVQDACKKDPPPQE 303
>gi|170064762|ref|XP_001867661.1| mitochondrial 39S ribosomal protein L3 [Culex quinquefasciatus]
gi|167882034|gb|EDS45417.1| mitochondrial 39S ribosomal protein L3 [Culex quinquefasciatus]
Length = 371
Score = 174 bits (441), Expect = 8e-42, Method: Composition-based stats.
Identities = 65/231 (28%), Positives = 109/231 (47%), Gaps = 15/231 (6%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH--------------RTLDKNGYM 47
R+GV+A+K+G ++ +G +I T+L + + VV + + KN Y
Sbjct: 104 RTGVIAKKIGQYPLWRKDGTKIRTTLLQIIDNHVVKYIPPEEFEPPREPNQKRNWKNPYG 163
Query: 48 AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107
+ VGA +K G F V PK+ L F + + + G+ + ++F VG
Sbjct: 164 CLLVGAESRDPSIFTKEYCGLFKDSGVIPKQHLCRFIISP-EARILPGTPLNVTHFRVGD 222
Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167
VDV G T+ GF G +KRH+F G+ A+HGV+ +HR G+ G RV+ KM G M
Sbjct: 223 FVDVRGKTVDHGFQGVVKRHSFKGMPASHGVTKTHRRPGNIGAGGAKARVWPGTKMPGHM 282
Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
G ++ L++ ++ K ++ V+G N + + D+ K
Sbjct: 283 GNRWRNLRGLKIWRINTKYNVMWVQGSNIAGDTNGLVYIYDTILPLRKYKE 333
>gi|327399523|ref|YP_004340392.1| 50S ribosomal protein L3 [Hippea maritima DSM 10411]
gi|327182152|gb|AEA34333.1| 50S ribosomal protein L3 [Hippea maritima DSM 10411]
Length = 206
Score = 174 bits (440), Expect = 9e-42, Method: Composition-based stats.
Identities = 97/205 (47%), Positives = 126/205 (61%), Gaps = 4/205 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++A+KLGMT +Y G+ IPVTVL + +T +K+GY A+QVG + K K V
Sbjct: 1 MLGLIAKKLGMTQLYVE-GKAIPVTVLEAQEGVITDIKTKEKDGYNAIQVGFIDTKEKRV 59
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+ G + V VSPKK L EFRV D G F G++VDV G T G+GFS
Sbjct: 60 TKPLLGVYKKVGVSPKKILKEFRVDDVDSFEVKGE-VKVDIFQKGEIVDVIGHTKGRGFS 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRHNF G HG S+ +R GS G + PGRV K +KM G G RVT+KNLEVV
Sbjct: 119 GVMKRHNFAGGPDGHG-SMFNRRVGSIGNCEFPGRVVKGRKMPGHYGNERVTIKNLEVVF 177
Query: 182 VDDKRGLILVKGCVPGAKKNSWILV 206
VD ++ LI +KG VPG+ K S++ +
Sbjct: 178 VDPEKKLIAIKGAVPGS-KGSYVNI 201
>gi|42524375|ref|NP_969755.1| 50S ribosomal protein L3 [Bdellovibrio bacteriovorus HD100]
gi|81829166|sp|Q6MJ15|RL3_BDEBA RecName: Full=50S ribosomal protein L3
gi|39576584|emb|CAE80748.1| 50S ribosomal protein L3 [Bdellovibrio bacteriovorus HD100]
Length = 220
Score = 174 bits (440), Expect = 9e-42, Method: Composition-based stats.
Identities = 75/203 (36%), Positives = 107/203 (52%), Gaps = 2/203 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G+ A K GM +YN G +PVTVL + V +T + +GY A+QV K KN +K
Sbjct: 17 GLFAFKEGMATIYNENGEAVPVTVLRYEPWFVSQIKTNEADGYEAIQVACHPKKAKNSNK 76
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
+G + + Q + VG+ S G V +T + GKGF+G+
Sbjct: 77 AEKGHLEKAGFENGAQFVKELRQAAPEGTVVGAQISIDSLAKGDFVKITSKSKGKGFAGS 136
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
+KR F G A+HG S HR GS+G R PGRV KK G +G VTVKN+EVV +
Sbjct: 137 VKRWGFAGGPASHG-SKFHRRPGSSGNRTWPGRVMPGKKFPGHLGAETVTVKNVEVVQII 195
Query: 184 DKRGLILVKGCVPGAKKNSWILV 206
+ +++VKG VPGA +N+ + +
Sbjct: 196 AEENVLMVKGPVPGA-RNTLVKL 217
>gi|262341013|ref|YP_003283868.1| 50S ribosomal protein L3 [Blattabacterium sp. (Blattella germanica)
str. Bge]
gi|262272350|gb|ACY40258.1| 50S ribosomal protein L3 [Blattabacterium sp. (Blattella germanica)
str. Bge]
Length = 210
Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 88/206 (42%), Positives = 131/206 (63%), Gaps = 3/206 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ + +GMT ++ G+ +P TV+ ++ C V+ +T++ +GY +VQ+G GE K+K
Sbjct: 1 MSGLIGKNIGMTSIFLENGKNVPCTVIKVNPCYVIQIKTVENDGYFSVQLGTGEKKLKKT 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+ P+ G F +SP+KKL EFR + L +G S F G+LV+V G++ GKGF
Sbjct: 61 NNPLLGHFKKSGLSPRKKLLEFR-ENSISHLKLGEKVSVDTFKKGELVNVKGISKGKGFQ 119
Query: 122 GAMKRHNFG-GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRHNF +HG RS GS G DP RVFK KKMAG+MG +TVKNLE++
Sbjct: 120 GVVKRHNFSGVGERSHGQHNRLRSPGSIGAGSDPSRVFKGKKMAGKMGKKNITVKNLEIL 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILV 206
+D + LI++KG VPG KNS++++
Sbjct: 180 KIDIHQNLIILKGSVPG-NKNSYLMI 204
>gi|195133722|ref|XP_002011288.1| GI16081 [Drosophila mojavensis]
gi|193907263|gb|EDW06130.1| GI16081 [Drosophila mojavensis]
Length = 369
Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats.
Identities = 71/230 (30%), Positives = 109/230 (47%), Gaps = 15/230 (6%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49
R GV+ARK+G ++ G RI T+L + + V+ + ++ N Y V
Sbjct: 105 RCGVIARKIGQYPLWLKNGERIRTTLLQVVDNHVIKYIPPEEYKPTQRPNVHNLNRYGCV 164
Query: 50 QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109
VGA ++K G F V P K L F V L G+ + +F VG+ V
Sbjct: 165 LVGAESTNPAQLTKEYCGIFRDSGVMPTKNLARFIVSPQAA-LAPGTPLNVGHFRVGEFV 223
Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169
DV G T+ GF G +KRH F G+ A+HGV+ +HR G+ G + GRV+ K+ G MG
Sbjct: 224 DVRGKTVYHGFQGVVKRHGFKGMPASHGVTKTHRRPGNIGGGGEKGRVWPGTKLPGHMGN 283
Query: 170 NRVTVKNLEVVSVDDKRGLILVKGC-VPGAKKNSWILVRDSFKSAVNCKG 218
K L + ++ K ++ V+G VPG+ N + + D+ +
Sbjct: 284 RWRISKGLRIWRINTKYNVMWVQGSAVPGS-TNGLVYIYDTILPLRKPQA 332
>gi|206896345|ref|YP_002247334.1| ribosomal protein L3 [Coprothermobacter proteolyticus DSM 5265]
gi|206738962|gb|ACI18040.1| ribosomal protein L3 [Coprothermobacter proteolyticus DSM 5265]
Length = 219
Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats.
Identities = 76/208 (36%), Positives = 114/208 (54%), Gaps = 3/208 (1%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ +K+GM+ + +G IPVT++ VV + D G +V +G K K ++
Sbjct: 4 IGLLGKKIGMSRFIDEKGVFIPVTLIKAGPNYVVNVK-KDSKGRESVALGFEVVKEKALN 62
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMTIGKGFS 121
KP G V P + + EFR + VG + F G+LVDV G + G+GF+
Sbjct: 63 KPQLGVLKKAGVPPVRFVREFRYPGISEKFEVGQEVNVADVFADGELVDVIGTSKGRGFA 122
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
GAMKR F G THG HR G+ G R PG V KKM+G G ++VTV+NL++V
Sbjct: 123 GAMKRWGFAGGPKTHGTRGWHRRVGAIGNRTYPGEVKPGKKMSGHYGNSQVTVRNLKIVK 182
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209
V ++ +I VKG VPG+ +N ++ +R +
Sbjct: 183 VIPEQNIIAVKGSVPGS-RNGFVCIRKA 209
>gi|31544255|ref|NP_852833.1| 50S ribosomal protein L3 [Mycoplasma gallisepticum str. R(low)]
gi|33860197|sp|O52332|RL3_MYCGA RecName: Full=50S ribosomal protein L3
gi|31541099|gb|AAP56401.1| 50S ribosomal protein L3 [Mycoplasma gallisepticum str. R(low)]
gi|284930294|gb|ADC30233.1| 50S ribosomal protein L3 [Mycoplasma gallisepticum str. R(high)]
gi|284931061|gb|ADC30999.1| 50S ribosomal protein L3 [Mycoplasma gallisepticum str. F]
Length = 236
Score = 173 bits (439), Expect = 2e-41, Method: Composition-based stats.
Identities = 74/215 (34%), Positives = 109/215 (50%), Gaps = 6/215 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+ K+GMT V+ GR IPVT++ ++ QVV +T +K+GY AVQ+G + KN+
Sbjct: 1 MKGIFGTKVGMTQVFEENGRLIPVTLVRVEPNQVVSVKTKEKDGYDAVQLGFNQTDEKNL 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F N + + V+ + F GQ+VDV T G+GF+
Sbjct: 61 NKPQLGHFKKANTN--NYKYLEEVRGMVGYKIGDLLKVEELFQEGQVVDVQARTKGRGFT 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQD---PGRVFKNKKMAGRMGGNRVTVKNLE 178
GA+KR NF HG HR GS + RV K KKM+G G VT++NL
Sbjct: 119 GAIKRWNFKIGSKGHGAGYPHRFQGSVQAGRGGSQAQRVMKGKKMSGHYGNELVTIQNLS 178
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+V + +++ G +PGA NS + + S K+
Sbjct: 179 IVGFLPEVSSVMISGAIPGA-NNSKVRITTSKKNP 212
>gi|210623188|ref|ZP_03293627.1| hypothetical protein CLOHIR_01577 [Clostridium hiranonis DSM 13275]
gi|210153725|gb|EEA84731.1| hypothetical protein CLOHIR_01577 [Clostridium hiranonis DSM 13275]
Length = 209
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 86/213 (40%), Positives = 130/213 (61%), Gaps = 4/213 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT ++ EG IPVTV+ + V +T++ +GY A+QVG +AK K++
Sbjct: 1 MKGILGKKVGMTQIFTEEGVVIPVTVVEVGPVVVTQVKTIENDGYNAIQVGFEDAKEKSL 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP +G ++ NV KK + ++ VG F G +DVTG++ GKGF
Sbjct: 61 NKPAKGHLAAANV--LKKHLKEFRVENAAEYTVGQEIKADIFEAGAKIDVTGISKGKGFQ 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRH THG S HR GS G PGRVFKNKK+AG MG +VT++NL++V
Sbjct: 119 GPIKRHGQSRGPETHG-SRYHRRPGSMGACSYPGRVFKNKKLAGHMGSVKVTIQNLDLVR 177
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VD ++ L+LVKG +PGA K S + ++++ K++
Sbjct: 178 VDAEKNLMLVKGAIPGA-KGSVVTIKEAVKASK 209
>gi|2766503|gb|AAB95387.1| ribosomal protein L3 [Mycoplasma gallisepticum]
Length = 236
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 74/215 (34%), Positives = 109/215 (50%), Gaps = 6/215 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+ K+GMT V+ GR IPVT++ ++ QVV +T +K+GY AVQ+G + KN+
Sbjct: 1 MKGIFGTKVGMTQVFEENGRLIPVTLVRVEPNQVVSVKTKEKDGYDAVQLGFNQTDEKNL 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F N + + V+ + F GQ+VDV T G+GF+
Sbjct: 61 NKPELGHFKKANTN--NYKYLEEVRGMVGYKVGDLLKVEELFQEGQVVDVQARTKGRGFT 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQD---PGRVFKNKKMAGRMGGNRVTVKNLE 178
GA+KR NF HG HR GS + RV K KKM+G G VT++NL
Sbjct: 119 GAIKRWNFKIGSKGHGAGYPHRFQGSVQAGRGGSQAQRVMKGKKMSGHYGNELVTIQNLS 178
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+V + +++ G +PGA NS + + S K+
Sbjct: 179 IVGFLPEVSSVMISGAIPGA-NNSKVRITTSKKNP 212
>gi|158296418|ref|XP_316827.4| AGAP000857-PA [Anopheles gambiae str. PEST]
gi|157015287|gb|EAA12062.4| AGAP000857-PA [Anopheles gambiae str. PEST]
Length = 373
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 63/223 (28%), Positives = 110/223 (49%), Gaps = 15/223 (6%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN--------------GYM 47
R+GV+A+K+G ++ +G++I T+L + + +VV + ++ Y
Sbjct: 100 RTGVIAKKIGQYPLWTKDGQKIRTTLLQIVDNEVVKYIPPEEYRPAQEPRQSRNWRKPYG 159
Query: 48 AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107
+ VGA +K G F V PKK L F V + LP G+ + S+F VG
Sbjct: 160 CLLVGAEHGDPSLFTKEYAGLFHESGVLPKKHLCRFIVSP-EAQLPSGTALTVSHFRVGD 218
Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167
VDV G+T+ +GF G +KRH F G+ +HGV+ +HR G+ G + RV+ ++ G M
Sbjct: 219 FVDVRGLTVDRGFQGVVKRHGFKGMPKSHGVTKTHRRPGNIGAGGNKARVWPGTRLPGHM 278
Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
G ++ L ++ ++ + ++ V G N + + D+
Sbjct: 279 GNRWRVLRGLRILRINPQYNVMWVMGSNIAGNTNGIVYIYDTI 321
>gi|307069692|ref|YP_003878169.1| 50S ribosomal subunit protein L3 [Candidatus Zinderia insecticola
CARI]
gi|306482952|gb|ADM89823.1| 50S ribosomal subunit protein L3 [Candidatus Zinderia insecticola
CARI]
Length = 202
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 78/204 (38%), Positives = 121/204 (59%), Gaps = 3/204 (1%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK-VKNVSK 63
++ +K+GM+C+YN G IPVT++ + N V + + K+ Y ++Q+ G+ K N+ K
Sbjct: 1 MIGKKIGMSCLYNKNGSMIPVTIIDVSNNFVTQIKNIKKDKYFSIQISYGKNKISSNMKK 60
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P+ G F + + K +G + F + Q V + G +IGKGFSG
Sbjct: 61 PLIGHFYKSKTK-YNYIIKEFKNKRYSKFNLGERIKINIFNLNQKVSIKGKSIGKGFSGT 119
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
+KRHNF RA+HG S SH+S GS G QDPGRVFK KKM G++G T++NLE++ +D
Sbjct: 120 IKRHNFSSGRASHGNSRSHKSPGSVGMCQDPGRVFKGKKMCGQLGNKNCTIRNLEILKID 179
Query: 184 DKRGLILVKGCVPGAKKNSWILVR 207
+K L+ +KG +PG KN+++ +
Sbjct: 180 NKNNLLWIKGSIPGF-KNNFVFIY 202
>gi|119484833|ref|ZP_01619315.1| 50S ribosomal protein L3 [Lyngbya sp. PCC 8106]
gi|119457651|gb|EAW38775.1| 50S ribosomal protein L3 [Lyngbya sp. PCC 8106]
Length = 218
Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats.
Identities = 79/215 (36%), Positives = 110/215 (51%), Gaps = 20/215 (9%)
Query: 12 MTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK----------- 59
MT V++ G IPVTV+ C V +T +GY A+Q+G GE K K
Sbjct: 1 MTQVFDAESGIAIPVTVIEAGPCIVTQIKTESTDGYTAIQLGYGEVKNKTRKLNTVKSPG 60
Query: 60 -----NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGM 114
+S +G + + L E+R+ +D +G F GQLVDV+G+
Sbjct: 61 KEVNKYLSNAEQGHLAKSGGQLVRHLREYRI-EDTSSYELGQELKADLFEPGQLVDVSGI 119
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
++G+GFSG KRHNF HG S +HR GS G PGRV+ KKMAGR GG ++T
Sbjct: 120 SMGRGFSGFQKRHNFRRGPMAHG-SKNHRQPGSIGPGTTPGRVYPGKKMAGRYGGKKITT 178
Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
L VV +D +R L+L+KG VPG + + +
Sbjct: 179 SKLIVVRIDPERNLLLIKGAVPGKP-GGLLNITPA 212
>gi|293977931|ref|YP_003543361.1| 50S ribosomal protein L3P [Candidatus Sulcia muelleri DMIN]
gi|292667862|gb|ADE35497.1| LSU ribosomal protein L3P [Candidatus Sulcia muelleri DMIN]
Length = 206
Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats.
Identities = 78/208 (37%), Positives = 128/208 (61%), Gaps = 5/208 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ + +GMT +Y+ G +P +++ C V+ +T +K+GY + Q+G E K KN
Sbjct: 1 MSGIIGKNIGMTSMYDESGFNVPCSIIEAGPCIVLQIKTKEKDGYDSCQLGFDEKKYKNT 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+ FF +PKKK+FEF ++ + + G++ ++F +LV++TG + GKGF
Sbjct: 61 NKPLLFFFKKFKSTPKKKIFEFPIKGN---IKSGNIIKLNFFHENELVNITGFSKGKGFQ 117
Query: 122 GAMKRHNFG-GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH F +HG R+ GS G DP RVFK +MAGRMG +VT+KN +++
Sbjct: 118 GVVKRHGFSGVGERSHGQHNRSRAPGSIGAGSDPSRVFKGTRMAGRMGNKKVTLKNRKIL 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
+D +++KG VPGA KNS+++++
Sbjct: 178 KIDLLNNFLIIKGSVPGA-KNSYLIIKK 204
>gi|195425857|ref|XP_002061179.1| GK10341 [Drosophila willistoni]
gi|194157264|gb|EDW72165.1| GK10341 [Drosophila willistoni]
Length = 375
Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats.
Identities = 71/230 (30%), Positives = 110/230 (47%), Gaps = 15/230 (6%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49
R GV+ARK+G ++ G R+ T+L + + V+ + ++ + Y +
Sbjct: 111 RCGVIARKIGQYPLWLKNGERVRTTLLQIVDNHVIKYTPPEEYQPSHRPSVHNLHKYGCL 170
Query: 50 QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109
VGA ++K G F V PKK + F V L G+ + +F VG+ V
Sbjct: 171 LVGAESTNPALLTKEYCGIFRDSGVMPKKNVARFIVSPQAA-LAPGTPLNVGHFRVGEFV 229
Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169
DV G T+ GF G +KRH F G+ A+HGV+ +HR G+ G + GRV+ KM G MG
Sbjct: 230 DVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHMGN 289
Query: 170 NRVTVKNLEVVSVDDKRGLILVKGC-VPGAKKNSWILVRDSFKSAVNCKG 218
K L + ++ K ++ V+G VPG+ N I + D+ K
Sbjct: 290 RWRISKGLRIWRINTKYNVMWVQGSAVPGS-TNGLIYIYDTILPLRKPKE 338
>gi|91200667|emb|CAJ73718.1| strongly similar to 50S ribosomal protein L3 [Candidatus Kuenenia
stuttgartiensis]
Length = 196
Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats.
Identities = 79/199 (39%), Positives = 118/199 (59%), Gaps = 3/199 (1%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
MT +Y EG +PVT++ C V+ +TL +GY AVQ+G + K+K +P G +
Sbjct: 1 MTQIYTGEGALVPVTLIKAGPCNVLQVKTLGNDGYSAVQLGYKDKKIKRAKRPEIGHAAK 60
Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
++ P + + E ++ D + +G + F +LVDV G++ GKGF+G MKR G
Sbjct: 61 ASLLPGRFVKEVKLDTVSD-IHLGQAVTLDIFEDVKLVDVIGISKGKGFAGVMKRWGMKG 119
Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
THG S HRS GS G DPGRV + KKM G++G RVT+KNL+VV VD ++ ++ V
Sbjct: 120 GPQTHG-STRHRSVGSVGAGTDPGRVIRGKKMPGQLGRERVTIKNLDVVKVDKEKNMLFV 178
Query: 192 KGCVPGAKKNSWILVRDSF 210
KG VPG K S+++++
Sbjct: 179 KGAVPG-YKGSYLIIKKIV 196
>gi|313123111|ref|YP_004033370.1| 50S ribosomal protein l3 [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|312279674|gb|ADQ60393.1| 50S ribosomal protein L3 [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
Length = 198
Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats.
Identities = 75/203 (36%), Positives = 112/203 (55%), Gaps = 5/203 (2%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
MT ++ +G +PVTV+ V+ +T++ +GY AVQ+G + + +KP +G
Sbjct: 1 MTQIFTKDGVLVPVTVIEATPNVVMQVKTVENDGYEAVQLGYQDKREVLSNKPEKGHADK 60
Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
SPK+ + E R + D VGS + F G +V+VTG + G G+ G +KRH+
Sbjct: 61 AKTSPKRFIRELRGVELSD-YEVGSEVTVETFKEGDVVNVTGTSRGHGYQGNIKRHHQSR 119
Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
THG S HR GS G RV K KK+ G MG VT++NL V V + ++++
Sbjct: 120 GPETHG-SRYHRIPGSMGSI--INRVPKGKKLPGHMGVKTVTIENLVVEKVVADKNVLMI 176
Query: 192 KGCVPGAKKNSWILVRDSFKSAV 214
KG VPGA KNS I+V+ S K++
Sbjct: 177 KGNVPGA-KNSLIVVKSSAKASK 198
>gi|73667228|ref|YP_303244.1| 50S ribosomal protein L3 [Ehrlichia canis str. Jake]
gi|109893428|sp|Q3YRK9|RL3_EHRCJ RecName: Full=50S ribosomal protein L3
gi|72394369|gb|AAZ68646.1| LSU ribosomal protein L3P [Ehrlichia canis str. Jake]
Length = 231
Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats.
Identities = 101/215 (46%), Positives = 145/215 (67%), Gaps = 5/215 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G+ K+G T +++ EG+RIPVT+LHL + ++ +T D NGY AV +G N+
Sbjct: 4 RIGLFLEKVGHTAIFDNEGKRIPVTLLHLRDSFIISTKTKDINGYNAVVLGVES--SVNI 61
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
KP N++ K ++FE RV D ++ S ++F Q +DVTG ++GKGF+
Sbjct: 62 KKPQLKILEKSNITAKCRIFESRVDNLDGIVKGAK-ISITHFVENQYIDVTGYSLGKGFA 120
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRHNF GL+A+HGVSI+HRS GSTG QDPGRV+K KKMAG +G ++VTV+NL+V+
Sbjct: 121 GVMKRHNFKGLKASHGVSIAHRSQGSTGQCQDPGRVYKGKKMAGHLGSSKVTVQNLKVIL 180
Query: 182 VDDKRGLILVKGC-VPGAKKNSWILVRDSFKSAVN 215
VD +R L++VKG +PGA K S++ V+D+ K +V
Sbjct: 181 VDQERSLLVVKGNNIPGA-KGSYVFVKDAVKKSVP 214
>gi|4376945|gb|AAD18786.1| L3 Ribosomal Protein [Chlamydophila pneumoniae CWL029]
gi|8979019|dbj|BAA98854.1| L3 ribosomal protein [Chlamydophila pneumoniae J138]
Length = 225
Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats.
Identities = 76/220 (34%), Positives = 114/220 (51%), Gaps = 11/220 (5%)
Query: 1 MR--SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58
MR V+ +K GM +++ +G + +V+ ++ V +T + +GY ++Q+GA E
Sbjct: 7 MRSHISVMGKKEGMIHIFDKDGSLVACSVIRVEPNVVTQIKTKESDGYFSLQIGAEEMNA 66
Query: 59 K------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111
VSKP G + L E R ++ + + +G F F VDV
Sbjct: 67 PAHTITKRVSKPKLGHLRKAGGRVFRFLKEVRGSEEALNGVSLGDAFGLEVFEDVSSVDV 126
Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171
G++ GKGF G MK+ F G +HG S HR GS G R PGR F K MG
Sbjct: 127 RGISKGKGFQGVMKKFGFRGGPGSHG-SGFHRHAGSIGMRSTPGRCFPGSKRPSHMGAEN 185
Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
VTVKNLEV+ VD ++ ++LVKG +PGA + S ++V+ S +
Sbjct: 186 VTVKNLEVIKVDLEKKVLLVKGAIPGA-RGSIVIVKHSSR 224
>gi|145341932|ref|XP_001416053.1| Plastid ribosomal protein L3, imported to chloroplast, large
ribosomal subunit [Ostreococcus lucimarinus CCE9901]
gi|144576277|gb|ABO94345.1| Plastid ribosomal protein L3, imported to chloroplast, large
ribosomal subunit [Ostreococcus lucimarinus CCE9901]
Length = 241
Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats.
Identities = 83/210 (39%), Positives = 107/210 (50%), Gaps = 5/210 (2%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G K GMT V+ +G +PVTV+ + D V +T +GY AVQVG + +
Sbjct: 25 VGAFGSKAGMTQVFTDDGLCVPVTVIAVRDGNVVTQVKTEATDGYNAVQVGYDAVRDDKL 84
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G + L EFR++ + F G VDV G TIGKGF
Sbjct: 85 TKPELGHCKKAGAPALRHLEEFRLRDAPTYEVGAQIKPTELFKEGDKVDVRGRTIGKGFQ 144
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
GA+KR+ F THG S SHR HGS G +PGR++ K+M G MG VT K L VVS
Sbjct: 145 GAVKRYGFSRGLMTHG-SKSHRQHGSIGSGTNPGRIYPGKRMHGHMGNEMVTTKGLTVVS 203
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
V + I+VKG VPG KK + V + K
Sbjct: 204 V--EDDCIIVKGNVPG-KKGALCKVTPNKK 230
>gi|16752393|ref|NP_444652.1| 50S ribosomal protein L3 [Chlamydophila pneumoniae AR39]
gi|161353776|ref|NP_224843.2| 50S ribosomal protein L3 [Chlamydophila pneumoniae CWL029]
gi|161353803|ref|NP_300703.2| 50S ribosomal protein L3 [Chlamydophila pneumoniae J138]
gi|161484684|ref|NP_876945.2| 50S ribosomal protein L3 [Chlamydophila pneumoniae TW-183]
gi|7674301|sp|Q9Z7Q7|RL3_CHLPN RecName: Full=50S ribosomal protein L3
gi|7189035|gb|AAF37984.1| ribosomal protein L3 [Chlamydophila pneumoniae AR39]
Length = 219
Score = 172 bits (435), Expect = 4e-41, Method: Composition-based stats.
Identities = 76/220 (34%), Positives = 114/220 (51%), Gaps = 11/220 (5%)
Query: 1 MR--SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58
MR V+ +K GM +++ +G + +V+ ++ V +T + +GY ++Q+GA E
Sbjct: 1 MRSHISVMGKKEGMIHIFDKDGSLVACSVIRVEPNVVTQIKTKESDGYFSLQIGAEEMNA 60
Query: 59 K------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111
VSKP G + L E R ++ + + +G F F VDV
Sbjct: 61 PAHTITKRVSKPKLGHLRKAGGRVFRFLKEVRGSEEALNGVSLGDAFGLEVFEDVSSVDV 120
Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171
G++ GKGF G MK+ F G +HG S HR GS G R PGR F K MG
Sbjct: 121 RGISKGKGFQGVMKKFGFRGGPGSHG-SGFHRHAGSIGMRSTPGRCFPGSKRPSHMGAEN 179
Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
VTVKNLEV+ VD ++ ++LVKG +PGA + S ++V+ S +
Sbjct: 180 VTVKNLEVIKVDLEKKVLLVKGAIPGA-RGSIVIVKHSSR 218
>gi|225436243|ref|XP_002271466.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 281
Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats.
Identities = 82/209 (39%), Positives = 116/209 (55%), Gaps = 3/209 (1%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
GV+A KLGM + EG+ +PVTV+ + V +T +GY AVQVG + + +
Sbjct: 66 VGVMATKLGMMSYFEPEGKVVPVTVVGFREGNIVTQVKTEATDGYSAVQVGYRRVRDRKL 125
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G P + L EFR+ D P + F G LVDV+G+TIGKGF
Sbjct: 126 TKPEMGHLEKAGTIPMRHLQEFRLVSVDGFEPNQKLVFEELFKEGDLVDVSGITIGKGFQ 185
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRHNF THG S SHR+ GS G PG V+K KKM GRMGG + ++ L++V
Sbjct: 186 GGIKRHNFRRGPMTHG-SKSHRALGSIGAGTTPGHVYKGKKMPGRMGGTKTKIRKLKIVK 244
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
+D+ ++++KG VPG N + + +
Sbjct: 245 IDNDLRVVMIKGAVPGKPGN-LLRITPAK 272
>gi|94502245|ref|ZP_01308731.1| ribosomal protein L3 [Candidatus Sulcia muelleri str. Hc
(Homalodisca coagulata)]
gi|161833819|ref|YP_001598015.1| 50S ribosomal subunit protein L3 [Candidatus Sulcia muelleri GWSS]
gi|189029486|sp|A8Z668|RL3_SULMW RecName: Full=50S ribosomal protein L3
gi|94451216|gb|EAT14155.1| ribosomal protein L3 [Candidatus Sulcia muelleri str. Hc
(Homalodisca coagulata)]
gi|152206309|gb|ABS30619.1| 50S ribosomal subunit protein L3 [Candidatus Sulcia muelleri GWSS]
Length = 206
Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats.
Identities = 77/208 (37%), Positives = 126/208 (60%), Gaps = 5/208 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
SG++ + +GMT +Y+ G +P +++ C V+ +T +K+GY + Q+G E K KN
Sbjct: 1 MSGIIGKNIGMTSMYDESGFNVPCSIIEAGPCIVLQIKTKEKDGYDSCQLGFDEKKYKNT 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP+ FF +PKKK+FE ++ + + G++ + F +LV++TG + GKGF
Sbjct: 61 NKPLLFFFKKFKSTPKKKIFELPIKGN---IKSGNIIKLNCFHENELVNITGFSKGKGFQ 117
Query: 122 GAMKRHNFG-GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G +KRH F +HG R+ GS G DP RVFK +MAGRMG +VT+KN +++
Sbjct: 118 GVVKRHGFSGVGERSHGQHNRSRAPGSIGAGSDPSRVFKGTRMAGRMGNKKVTLKNRKIL 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
+D +++KG VPGA KNS+++++
Sbjct: 178 KIDLLNNFLIIKGSVPGA-KNSYLIIKK 204
>gi|183221347|ref|YP_001839343.1| 50S ribosomal protein L3 [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189911440|ref|YP_001962995.1| 50S ribosomal protein L3 [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|226730528|sp|B0SAF4|RL3_LEPBA RecName: Full=50S ribosomal protein L3
gi|226730529|sp|B0SSH7|RL3_LEPBP RecName: Full=50S ribosomal protein L3
gi|167776116|gb|ABZ94417.1| 50S Ribosomal protein L3 [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167779769|gb|ABZ98067.1| 50S ribosomal protein L3 [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
Length = 207
Score = 171 bits (434), Expect = 6e-41, Method: Composition-based stats.
Identities = 81/207 (39%), Positives = 112/207 (54%), Gaps = 5/207 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ KLGM ++N +G+ + VTVL + C V +T +GY AVQ+ G+AK K+
Sbjct: 1 MAKGLIGEKLGMAHIFNNDGKMVTVTVLRVGPCFVSQVKTEANDGYEAVQLAFGDAKEKH 60
Query: 61 VSKPMRGFFSSVNV-SPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
++K G N+ +PKK L EF+ + V F + V VTG + GKG
Sbjct: 61 LTKAELGHIKKANIATPKKTLVEFKGFEGVA--VGSEVKLADIFALDDTVKVTGTSKGKG 118
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
G +KRH F G A HG S R GS G PGRVFK KM GRMG + TV+NL+V
Sbjct: 119 TQGVVKRHGFAGGPAGHG-SRFQRHPGSIGSNTTPGRVFKGLKMGGRMGSEQTTVRNLKV 177
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILV 206
V +D L+ V G VPG ++ + +
Sbjct: 178 VKIDADANLVFVSGPVPG-RERGIVTI 203
>gi|312375540|gb|EFR22896.1| hypothetical protein AND_14042 [Anopheles darlingi]
Length = 1032
Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats.
Identities = 66/232 (28%), Positives = 106/232 (45%), Gaps = 15/232 (6%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD--------------KNGYM 47
R+GV+A+K+G ++ G +I T+L + +VV + + + Y
Sbjct: 759 RTGVIAKKIGQYPLWTRNGTKIRTTLLQIVENEVVKYIPPEEYRPAQEPRQRRNWRRPYG 818
Query: 48 AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107
+ VGA +K G F V PK+ L F V + LP G+ + +F VG
Sbjct: 819 CLLVGAENGDPSLFTKEYAGLFQHTGVLPKQHLCRFLVSP-EAQLPPGTALTVDHFRVGD 877
Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167
VDV G T+ +GF G +KRH F G+ THGV+ +HR G+ G RV+ KM G M
Sbjct: 878 YVDVRGKTVDRGFQGVVKRHGFKGMPKTHGVTKTHRRPGNIGAGGQKARVWPGTKMPGHM 937
Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
G ++ L+V+ ++ + ++ V+ N + V D+ K
Sbjct: 938 GNRWRVLRGLQVLRINRQYNVMWVRSSNIAGSTNGLVYVYDTVLPLRKHGAK 989
>gi|307194194|gb|EFN76611.1| 39S ribosomal protein L3, mitochondrial [Harpegnathos saltator]
Length = 348
Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats.
Identities = 68/230 (29%), Positives = 115/230 (50%), Gaps = 16/230 (6%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN----GYMAVQV------ 51
R+G++A+K+G+ ++ +G ++ T+L + + +VV + ++ G +Q+
Sbjct: 81 RTGLIAKKIGVYPLWLKDGTKVYSTLLQVVDNEVVKYIPPEEFYPVIGKKPIQIKRRLGC 140
Query: 52 ---GAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQL 108
GAG + V+K G F V PK L F + + L G+ ++F G++
Sbjct: 141 LVVGAGNINPQLVTKEYSGIFKDSGVMPKLVLRRFIISPEAALQ-PGTPLFATHFKPGEV 199
Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168
VD+ G TI +GF G MKR F G+ ATHGV+ +HR G+ G RV KM G MG
Sbjct: 200 VDIRGKTIDRGFQGVMKRWGFKGMPATHGVTKTHRRPGNIGSGGQKARVMPGTKMPGHMG 259
Query: 169 GNRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCK 217
+K +E++ ++ K ++ VKG +PG N + + D+ K
Sbjct: 260 NRWRILKGVEILRINTKYNVLWVKGHNIPGETNN-YCYIYDTILPLKKSK 308
>gi|226329480|ref|ZP_03804998.1| hypothetical protein PROPEN_03389 [Proteus penneri ATCC 35198]
gi|225202666|gb|EEG85020.1| hypothetical protein PROPEN_03389 [Proteus penneri ATCC 35198]
Length = 181
Score = 171 bits (433), Expect = 7e-41, Method: Composition-based stats.
Identities = 85/183 (46%), Positives = 114/183 (62%), Gaps = 2/183 (1%)
Query: 30 LDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD 89
+ N +V R L+K+GY A+QV G K V KP G F+ V + L EFR+ + +
Sbjct: 1 MKNNRVTQVRDLEKDGYRAIQVTTGSKKANRVLKPEAGHFAKAGVEAGRLLREFRLNEGE 60
Query: 90 DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTG 149
+ VG S F + VDVTG + GKGF+G +KR NF ATHG S+SHR GS G
Sbjct: 61 E-YTVGQSISVEIFADVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIG 119
Query: 150 CRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
Q PG+VFK KKMAG++G +VTV++LEVV VD +R L+LVKG VPGA S ++V+ +
Sbjct: 120 QNQTPGKVFKGKKMAGQLGNEQVTVQSLEVVRVDAERNLLLVKGAVPGA-TGSDLIVKPA 178
Query: 210 FKS 212
K+
Sbjct: 179 VKA 181
>gi|315186331|gb|EFU20092.1| 50S ribosomal protein L3 [Spirochaeta thermophila DSM 6578]
Length = 198
Score = 171 bits (433), Expect = 7e-41, Method: Composition-based stats.
Identities = 85/201 (42%), Positives = 115/201 (57%), Gaps = 4/201 (1%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
MT V++ G +PVTV+ ++ VV RT +++GY A+ +GA K KP G F
Sbjct: 1 MTQVFDANGYVVPVTVIKVEKNTVVDVRTPERHGYRALVLGAFPLKASRAVKPYLGQFQK 60
Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
+ PKK L E R + D G F + VDV G++ GKG+ G MKRH F G
Sbjct: 61 RGLEPKKVLREIRDFEGD--YKPGDEIGVEIFEGVRFVDVRGLSKGKGYQGVMKRHGFSG 118
Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
A+HG S HR+HGSTG P +V K KMAGRMGG +V V+NL +V VD +RG +LV
Sbjct: 119 GPASHG-SKFHRAHGSTGQATYPAKVLKGTKMAGRMGGVQVCVQNLRIVEVDKERGCLLV 177
Query: 192 KGCVPGAKKNSWILVRDSFKS 212
+G VPG +K ++V + K
Sbjct: 178 EGAVPGPRKG-VVIVTRAKKK 197
>gi|87306538|ref|ZP_01088685.1| 50S ribosomal protein L3 [Blastopirellula marina DSM 3645]
gi|87290717|gb|EAQ82604.1| 50S ribosomal protein L3 [Blastopirellula marina DSM 3645]
Length = 217
Score = 171 bits (433), Expect = 7e-41, Method: Composition-based stats.
Identities = 72/217 (33%), Positives = 112/217 (51%), Gaps = 22/217 (10%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFS- 70
MT V++ G IPVTV+ C V+ ++ +++GY AVQ+G + + ++ RG +
Sbjct: 1 MTQVFDESGNIIPVTVIEAGPCHVLQLKSQERDGYEAVQLGFDDKPRRLANRSERGQVAP 60
Query: 71 ------------------SVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
+ PK+ + E R + +G S + + VD+
Sbjct: 61 LSSKRAKKLAAAGVEASAKPDCEPKRFVRELRGSTEG--FEIGQEVSVGVLSDVKAVDIV 118
Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
G + G+G++G MKRHNF G RATHGV HR G TGC P R FK M+G+ G +V
Sbjct: 119 GTSKGRGYAGVMKRHNFAGQRATHGVKKVHRHTGGTGCSAYPSRTFKGLNMSGQYGNAKV 178
Query: 173 TVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
T +N++VV VD++ LILV G PG +++V+ +
Sbjct: 179 TQRNVKVVKVDEENNLILVYGAAPGP-NGGFVVVKAT 214
>gi|313891553|ref|ZP_07825163.1| 50S ribosomal protein L3 [Dialister microaerophilus UPII 345-E]
gi|329121828|ref|ZP_08250443.1| 50S ribosomal protein L3 [Dialister micraerophilus DSM 19965]
gi|313120012|gb|EFR43194.1| 50S ribosomal protein L3 [Dialister microaerophilus UPII 345-E]
gi|327467766|gb|EGF13258.1| 50S ribosomal protein L3 [Dialister micraerophilus DSM 19965]
Length = 213
Score = 170 bits (432), Expect = 9e-41, Method: Composition-based stats.
Identities = 84/216 (38%), Positives = 123/216 (56%), Gaps = 5/216 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M ++ RKLGM+ V+ G +PV+V+ + VV +T++ +GY AVQ+G G K K+
Sbjct: 1 MSKAILGRKLGMSQVFAENGDLVPVSVIEVLPNTVVAVKTVETDGYYAVQLGYGAIKEKH 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP++G F V+P K L E R + VG + F G ++DV G++ GKGF
Sbjct: 61 LTKPLKGQFEKAGVAPTKFLREHRFSEKPA-YEVGQTLAADIFAEGDVIDVVGISKGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGS--TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
+G +KRHN +HG S +HR S G+VFK KKM G MG +RVTV+NL+
Sbjct: 120 AGTIKRHNHQRGPESHG-SKNHRQTASLGARMSGGGGKVFKGKKMPGHMGCDRVTVQNLK 178
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
VV +D R L+LVK K + V+++ KSA
Sbjct: 179 VVRIDTARNLMLVK-GGIPGPKGGLVKVQEAVKSAK 213
>gi|42559212|sp|Q7XYP4|RK3_BIGNA RecName: Full=50S ribosomal protein L3, chloroplastic; Flags:
Precursor
gi|32307490|gb|AAP79150.1| ribosomal protein rpL3 [Bigelowiella natans]
Length = 302
Score = 170 bits (432), Expect = 9e-41, Method: Composition-based stats.
Identities = 79/209 (37%), Positives = 108/209 (51%), Gaps = 4/209 (1%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLD-NCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
G++ K GMT Y+ EG PVTV+ L+ V +T + +GY AVQ+ E + + +
Sbjct: 90 GLMGTKAGMTTYYDDEGIAHPVTVIALEAGNVVTQVKTKETDGYDAVQLAYKETRDRTIP 149
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFS 121
P R K + D G F VG LVDV+G + GKGF
Sbjct: 150 WPERQHLRKHGNVKAMKHLKEFKIADVSEFTPGQQLKAEELFEVGDLVDVSGTSSGKGFQ 209
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G+++R +HG S SHR HGS GC P RV+K KMAGRMG R TVK L V+
Sbjct: 210 GSIRRWGMKRGPMSHG-SKSHRQHGSIGCSATPSRVYKGLKMAGRMGNERKTVKKLPVMM 268
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
V+D+ I+V+G VPG KK + + +R +
Sbjct: 269 VNDEEKYIVVRGSVPG-KKGTIVELRPTK 296
>gi|269302431|gb|ACZ32531.1| ribosomal protein L3 [Chlamydophila pneumoniae LPCoLN]
Length = 219
Score = 170 bits (432), Expect = 9e-41, Method: Composition-based stats.
Identities = 76/220 (34%), Positives = 114/220 (51%), Gaps = 11/220 (5%)
Query: 1 MR--SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58
MR V+ +K GM +++ +G + +V+ ++ V +T + +GY ++Q+GA E
Sbjct: 1 MRSHISVMGKKEGMIHIFDKDGSLVACSVIRVEPNVVAQIKTKESDGYFSLQMGAEEMNA 60
Query: 59 K------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111
VSKP G + L E R ++ + + +G F F VDV
Sbjct: 61 PAHTITKRVSKPKLGHLRKAGGRVFRFLKEVRGSEEALNGVSLGDAFGLEVFEDVSSVDV 120
Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171
G++ GKGF G MK+ F G +HG S HR GS G R PGR F K MG
Sbjct: 121 RGISKGKGFQGVMKKFGFRGGPGSHG-SGFHRHAGSIGMRSTPGRCFPGSKRPSHMGAEN 179
Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
VTVKNLEV+ VD ++ ++LVKG +PGA + S ++V+ S +
Sbjct: 180 VTVKNLEVIKVDLEKKVLLVKGAIPGA-RGSIVIVKHSSR 218
>gi|255639119|gb|ACU19859.1| unknown [Glycine max]
Length = 264
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 81/209 (38%), Positives = 113/209 (54%), Gaps = 3/209 (1%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
GV+ KLGM + +G +PVTV+ + V +T +GY AVQVG + + +
Sbjct: 49 IGVMGTKLGMMSYFESDGEVVPVTVVGFKEGNIVTQIKTEATDGYDAVQVGYRRVRDRKL 108
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G V P + L EFR+Q D + F G LVDV+G TIGKGF
Sbjct: 109 TKPEMGHLHKVGAIPMRHLQEFRLQAIDGFDLNQRLLFDETFKEGDLVDVSGTTIGKGFQ 168
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRHNF THG S SHR GS G PGRV+K KKM GRMGG + ++ L++V
Sbjct: 169 GGIKRHNFKRGPMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVK 227
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
+D ++++KG +PG N + + +
Sbjct: 228 IDKDLNVLMIKGALPGKPGN-LLRITPAK 255
>gi|195175673|ref|XP_002028553.1| GL21035 [Drosophila persimilis]
gi|194104883|gb|EDW26926.1| GL21035 [Drosophila persimilis]
Length = 368
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 71/230 (30%), Positives = 110/230 (47%), Gaps = 16/230 (6%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-------------RTLDKNGYMA 48
R GV+ARK+G ++ G+++ T+L + + V+ + R + N Y
Sbjct: 104 RCGVIARKIGQYPLWLKNGKKVRTTLLQIADNHVIKYMPHEECRPQKNLSRVHNSNQYGC 163
Query: 49 VQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQL 108
+ VGA ++K G F V PKK + F V D L G+ + S F VG+
Sbjct: 164 LLVGAESTNPSMLTKEYCGIFRDAGVVPKKNIMRFMVSPDGA-LAPGTPLNISRFRVGEY 222
Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168
VDV G T+ GF G +KRH + G+ A+HGV+ +HR G+ G + GRV+ KM G MG
Sbjct: 223 VDVRGKTVDHGFQGVVKRHGYKGMPASHGVTKTHRRPGNIGGGGEKGRVWPGTKMPGHMG 282
Query: 169 GNRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCK 217
+K L + + K ++ V+G VPG + + D+ K
Sbjct: 283 NRWRVLKGLRIWRTNAKYNVMWVQGSSVPGP-TGGLVYIYDTILPLRKLK 331
>gi|116780926|gb|ABK21883.1| unknown [Picea sitchensis]
Length = 303
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 81/209 (38%), Positives = 112/209 (53%), Gaps = 3/209 (1%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
GV+ KLGM + G+ +PVTV+ + V +T +GY AVQVG + K +
Sbjct: 88 VGVMGTKLGMMSYFEPGGKFVPVTVVGFHEGNIVTQIKTEATDGYEAVQVGYRRVRDKKL 147
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G + V P + L EFR+ D + F G LVDV+G +IGKGF
Sbjct: 148 TKPEMGHLNKVGTIPMRHLQEFRLTSVDGFELSQRLTFEELFKEGDLVDVSGKSIGKGFQ 207
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRHNF +HG S SHR GS G PGRV+ KKM GRMGG + ++ L+VV
Sbjct: 208 GGIKRHNFRRGPMSHG-SKSHRQLGSIGAGTTPGRVYPGKKMPGRMGGTKTKIRKLQVVK 266
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
+D + +L+KG VPG N + + +
Sbjct: 267 IDSELRTVLIKGAVPGKPGN-LLRITPAK 294
>gi|325117734|emb|CBZ53285.1| putative ribosomal protein L3p [Neospora caninum Liverpool]
Length = 407
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 83/209 (39%), Positives = 118/209 (56%), Gaps = 8/209 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+G++A K+GM +++ G R VTV +D C V+ RTLDK+GY A +G G + V
Sbjct: 153 RTGLLAYKIGMMSLWDGWGERHAVTVCQVDRCVVMEQRTLDKDGYEACVMGIGYQPIHKV 212
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KPM G + + PK ++ EF+ D LLPVG S +FT GQ V V+G + KG+
Sbjct: 213 TKPMLGVYIRSRIEPKSRIAEFKCSS-DCLLPVGHEMSVRHFTPGQHVFVSGWSKDKGYL 271
Query: 122 GAMKRHNFGGLRATHGVS-ISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G KR F G A+HGV +H S GS G + V++ KKMAG GG+ V N +V
Sbjct: 272 GVKKRWGFAGQNASHGVEAKAHSSPGSIGQSKTVNVVWRFKKMAGHAGGDPRVV-NCKVF 330
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
++ +R LI +KG K S I + D+
Sbjct: 331 RIEAQRNLIFLKG-----YKGSLIKISDA 354
>gi|257067060|ref|YP_003153316.1| 50S ribosomal protein L3 [Anaerococcus prevotii DSM 20548]
gi|256798940|gb|ACV29595.1| ribosomal protein L3 [Anaerococcus prevotii DSM 20548]
Length = 209
Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 79/186 (42%), Positives = 108/186 (58%), Gaps = 1/186 (0%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
+ K+GMT V + +G PVTVL D VV +T++ +GY A+QVG + K KNV+KP
Sbjct: 4 IFTTKVGMTQVIDEDGVITPVTVLKADENVVVQVKTVETDGYNAIQVGYMDKKEKNVTKP 63
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+R F N S K+ L E ++ L +G + F G +VDV + GKG GA+
Sbjct: 64 VREHFKKANASTKRFLREINFGEETPELNLGDTITVEQFEAGDIVDVVATSKGKGTQGAI 123
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR N+G A+HG S SHR G+ DP RVFK +K +G+MG RVTV+N+EVV V
Sbjct: 124 KRWNYGRGPASHG-SKSHRVAGARAAGSDPARVFKGRKGSGKMGNERVTVQNIEVVKVSV 182
Query: 185 KRGLIL 190
+ IL
Sbjct: 183 EDNYIL 188
>gi|99032309|pdb|2FTC|C Chain C, Structural Model For The Large Subunit Of The Mammalian
Mitochondrial Ribosome
Length = 211
Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 74/213 (34%), Positives = 108/213 (50%), Gaps = 3/213 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAVQVGAGEAKVKN 60
R G++A KLGM ++ +G++ VT+L + +C V+ + + + NG MA G+ +
Sbjct: 1 RVGLIALKLGMMPLWTKDGQKHVVTLLQVQDCHVLKYTSKENCNGKMATLSVGGKTVSRF 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
F P K+ + D+ + G+ ++F GQ VDVT TIGKGF
Sbjct: 61 RKATSILEFYRELGLPPKQTVKIFNITDNAAIKPGTPLYAAHFRPGQYVDVTAKTIGKGF 120
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G MKR F G ATHG + +HR G+ D GRV+ KM G+MG T L+V
Sbjct: 121 QGVMKRWGFKGQPATHGQTKTHRRPGAVAT-GDIGRVWPGTKMPGKMGNIYRTEYGLKVW 179
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
++ K +I V G VPG KN + V+DS A
Sbjct: 180 RINTKHNIIYVNGSVPG-HKNCLVKVKDSKLPA 211
>gi|71029452|ref|XP_764369.1| 60S ribosomal protein L3 [Theileria parva strain Muguga]
gi|68351323|gb|EAN32086.1| 60S ribosomal protein L3, putative [Theileria parva]
Length = 347
Score = 170 bits (430), Expect = 2e-40, Method: Composition-based stats.
Identities = 83/209 (39%), Positives = 118/209 (56%), Gaps = 4/209 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
RSGV+A K+G +++ G R VTV H+D C V+ RT++KNGY A+Q+G G +K
Sbjct: 88 RSGVLAYKIGCMSLWDDWGVRHAVTVCHVDRCVVLEKRTIEKNGYEALQLGLGYKNIKQQ 147
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SKP G F + K + EF+ D LLP G FS +FT GQ V V+G + KGF
Sbjct: 148 SKPNIGRFIKLGTGSKNHIAEFKCSS-DCLLPEGHYFSVRHFTPGQWVFVSGWSKAKGFK 206
Query: 122 GAMKRHNFGGLRATHGVSIS-HRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GAM+R +FGG +HG H + GS + V++N KM G +G + V N V
Sbjct: 207 GAMRRWSFGGQNQSHGTECKAHSAPGSISQGKSVHIVWRNTKMGGHVGPDPR-VTNCRVF 265
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
++ R LI +KG +PG + S + +RD+
Sbjct: 266 RIETHRNLIFLKGAIPG-EIGSVVKIRDA 293
>gi|298243968|ref|ZP_06967775.1| 50S ribosomal protein L3 [Ktedonobacter racemifer DSM 44963]
gi|297557022|gb|EFH90886.1| 50S ribosomal protein L3 [Ktedonobacter racemifer DSM 44963]
Length = 262
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 89/261 (34%), Positives = 124/261 (47%), Gaps = 52/261 (19%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M ++ RK+GMT V+ G IPVTV+ + C V +T+ ++GY AVQ+G E +K+
Sbjct: 1 MLDALLGRKVGMTQVFGQNGTVIPVTVIEVGPCIVTQVKTVARDGYEAVQIGFEETTLKH 60
Query: 61 VSKPMRGFFSSVNV---------------------------------------------- 74
++P G
Sbjct: 61 STRPELGHLGHSLPLLKGQRKALQTHDQQAKSEENKEEEKQSKQVRKLLKIRENRQRRPG 120
Query: 75 ---SPKKKLFEFRVQKDDDL--LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF 129
P K L E +Q+ DL + +G F+ S FT G++VD+ G+T GKGF G +KRH F
Sbjct: 121 PELGPFKVLREVGLQEGVDLGSVELGHSFNASLFTDGEIVDIVGITKGKGFQGGVKRHGF 180
Query: 130 GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLI 189
G THG S R+ GS G PGRV K +MAGRMG RVTVK L++V D +R L+
Sbjct: 181 RGGPRTHGQSDRLRAPGSIGSGTTPGRVLKGTRMAGRMGNARVTVKKLQIVQSDPERNLL 240
Query: 190 LVKGCVPGAKKNSWILVRDSF 210
+VKG VPGA + ++
Sbjct: 241 VVKGSVPGA-NGGLLTIKKHV 260
>gi|116283537|gb|AAH16586.1| Mrpl3 protein [Mus musculus]
Length = 243
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 69/210 (32%), Positives = 103/210 (49%), Gaps = 5/210 (2%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNG--YMAVQVGAGEAKVKNVSKPMRGFF 69
M ++ +G++ VT+L + +C V+ + + + A+ VG F+
Sbjct: 1 MMPLWTKDGQKHAVTLLQVQDCHVLKYTPKEDHNGKIAALTVGGKTVSRFYKPDSRLEFY 60
Query: 70 SSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF 129
+ + PK+ F V D+ ++ G+ ++F GQ VDVT TIGKGF G MKR F
Sbjct: 61 RDLGLPPKQIHKIFHVT-DNAVIKPGTPLYAAHFRPGQYVDVTAKTIGKGFQGVMKRWGF 119
Query: 130 GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLI 189
G A+HG + +HR G+ D RV+ KM GRMG TV L+V V+ K +I
Sbjct: 120 KGQPASHGQTKTHRRPGAIST-GDIARVWPGTKMPGRMGNQNRTVYGLKVWRVNTKHNII 178
Query: 190 LVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
V G VPG KN + ++DS A K
Sbjct: 179 YVNGSVPG-HKNCLVKIKDSTLPAYKDSCK 207
>gi|239618265|ref|YP_002941587.1| ribosomal protein L3 [Kosmotoga olearia TBF 19.5.1]
gi|259646550|sp|C5CGR4|RL3_KOSOT RecName: Full=50S ribosomal protein L3
gi|239507096|gb|ACR80583.1| ribosomal protein L3 [Kosmotoga olearia TBF 19.5.1]
Length = 213
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 90/217 (41%), Positives = 125/217 (57%), Gaps = 8/217 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN- 60
G++ RKLGMT +Y +G+ + VTV+ C VV +T Y A+Q+G E +
Sbjct: 1 MKGIIGRKLGMTTIY-EDGKALGVTVIKAGPCTVVQKKTAAGGEYNAIQLGFEELSPERA 59
Query: 61 ---VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
++KP+ F + V P + L E RV+ D+ VG V F G+LVDVTG T G
Sbjct: 60 KKLLTKPILKKFEAAKVKPHRILKEIRVENPDE-YNVGDVIDAGIFKEGELVDVTGWTKG 118
Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
+GF+GAMKR NFGG THG S HR GS G +P +++K KKM GR G RVTV N+
Sbjct: 119 RGFTGAMKRWNFGGGEVTHG-SKFHRELGSVGNHTEPAKIWKGKKMPGRYGNERVTVLNV 177
Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
+VV VD + GLI + G VPGA + +++R + +
Sbjct: 178 KVVKVDAENGLIAIHGAVPGA-RGGLVIIRAAKRPRK 213
>gi|242063968|ref|XP_002453273.1| hypothetical protein SORBIDRAFT_04g002980 [Sorghum bicolor]
gi|241933104|gb|EES06249.1| hypothetical protein SORBIDRAFT_04g002980 [Sorghum bicolor]
Length = 270
Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats.
Identities = 79/211 (37%), Positives = 113/211 (53%), Gaps = 5/211 (2%)
Query: 3 SGVVARKLGMTCVYN-IEGRRIPVTVLHL--DNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
GV+A K+GM ++ G+ +PVTV+ V +T +GY AVQVG +
Sbjct: 53 VGVMATKVGMMTYFDPETGKPVPVTVVGFREGGNVVTQVKTAATDGYDAVQVGYHGVRED 112
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+++P G P K L EFR+ D P + F G ++DV+G TIGKG
Sbjct: 113 KLTRPELGHLGKAGAPPLKHLQEFRLTAVDAFEPGQPLDFADLFKEGDIIDVSGNTIGKG 172
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KRHNF THG S SHR GS G PGRV+K KKM GRMGG + ++ L++
Sbjct: 173 FQGGIKRHNFKRGLMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGKKTKIRKLKI 231
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
V +D+ ++++KG VPG N + + +
Sbjct: 232 VKIDNDLRVLMIKGAVPGKPGN-LLRITPAK 261
>gi|29839861|ref|NP_828967.1| 50S ribosomal protein L3 [Chlamydophila caviae GPIC]
gi|42559611|sp|Q824Q1|RL3_CHLCV RecName: Full=50S ribosomal protein L3
gi|29834208|gb|AAP04845.1| ribosomal protein L3 [Chlamydophila caviae GPIC]
Length = 221
Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats.
Identities = 76/222 (34%), Positives = 115/222 (51%), Gaps = 11/222 (4%)
Query: 1 MRS--GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK- 57
MRS ++ +K GM V++ +G + +V+ + + V + +GY A+Q+GA E
Sbjct: 1 MRSQLSLMGKKEGMIHVFDKDGNLVACSVISVGSNVVTQIKVDSTDGYNAIQMGANEINV 60
Query: 58 -----VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111
K ++KP G L E R+ +D + + +G+ F VD+
Sbjct: 61 PEKTLEKRMNKPELGHLKKSGSRVFGLLKEVRLSEDAINEVSLGNEFGLEVLEDISSVDI 120
Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171
+G++ GKGF G MKR F G THG S HR GS G R PGR F K MG
Sbjct: 121 SGVSKGKGFQGVMKRFGFRGGPKTHG-SGFHRHAGSIGMRSTPGRCFPGSKRPSHMGTVN 179
Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
VTVKNLEVV +D ++ ++LVKG +PG + S +++R S ++
Sbjct: 180 VTVKNLEVVKIDLEKKVLLVKGAIPGP-RGSVVVIRRSSRAK 220
>gi|84997293|ref|XP_953368.1| 50S ribosomal protein L3 [Theileria annulata strain Ankara]
gi|65304364|emb|CAI76743.1| 50S ribosomal protein L3, putative [Theileria annulata]
Length = 347
Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats.
Identities = 81/209 (38%), Positives = 117/209 (55%), Gaps = 4/209 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
RSGV+A K+G +++ G R VTV +D C V+ RT++K+GY A+Q+G G +K
Sbjct: 88 RSGVLAYKIGCMSLWDDWGVRHAVTVCQVDRCVVLEKRTIEKHGYEALQLGLGYKNIKQQ 147
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SKP G F + K + EF+ D LLP G FS +FT GQ V V+G + KGF
Sbjct: 148 SKPNIGRFIKLGTGSKNHIAEFKCSS-DCLLPEGHYFSVRHFTPGQWVFVSGWSKAKGFK 206
Query: 122 GAMKRHNFGGLRATHGVSIS-HRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GAM+R +FGG +HG H + GS + V++N KM G +G + V N V
Sbjct: 207 GAMRRWSFGGQNQSHGTECKAHSAPGSISQGKSVHIVWRNTKMGGHVGPDPR-VTNCRVF 265
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
++ R LI +KG +PG + S + +RD+
Sbjct: 266 RIETHRNLIFLKGAIPG-EIGSVVKIRDA 293
>gi|58579302|ref|YP_197514.1| 50S ribosomal protein L3 [Ehrlichia ruminantium str. Welgevonden]
gi|58417928|emb|CAI27132.1| 50S ribosomal protein L3 [Ehrlichia ruminantium str. Welgevonden]
Length = 236
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 101/215 (46%), Positives = 143/215 (66%), Gaps = 5/215 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ K+G + +++ EG+RIPVT+LHL + VV + D +GY + V G N+
Sbjct: 9 RIGLLLEKVGHSAIFDNEGKRIPVTLLHLRDSFVVSIKDKDSHGYTS--VVFGMKVSTNM 66
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
KP N++ K+FE RV D+L V ++F Q VD+TG ++GKGF+
Sbjct: 67 KKPQLKILQKSNINVNCKIFESRVDHIDNLTVGAKVL-ITHFVENQYVDITGCSLGKGFA 125
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRHNF GL+A+HGVSISHRS GSTG QDPGRV+K KKMAG +G +RVTV+N++V+S
Sbjct: 126 GVMKRHNFKGLKASHGVSISHRSQGSTGQCQDPGRVYKGKKMAGHLGNSRVTVQNIKVIS 185
Query: 182 VDDKRGLILVKGC-VPGAKKNSWILVRDSFKSAVN 215
VD ++ L++VKG +PGA+ S++ VRD+ K V
Sbjct: 186 VDKEKSLLVVKGNNIPGAQ-GSYLFVRDAIKKPVP 219
>gi|57239336|ref|YP_180472.1| 50S ribosomal protein L3 [Ehrlichia ruminantium str. Welgevonden]
gi|57161415|emb|CAH58339.1| 50S ribosomal protein L3 [Ehrlichia ruminantium str. Welgevonden]
Length = 231
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 101/215 (46%), Positives = 143/215 (66%), Gaps = 5/215 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ K+G + +++ EG+RIPVT+LHL + VV + D +GY + V G N+
Sbjct: 4 RIGLLLEKVGHSAIFDNEGKRIPVTLLHLRDSFVVSIKDKDSHGYTS--VVFGMKVSTNM 61
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
KP N++ K+FE RV D+L V ++F Q VD+TG ++GKGF+
Sbjct: 62 KKPQLKILQKSNINVNCKIFESRVDHIDNLTVGAKVL-ITHFVENQYVDITGCSLGKGFA 120
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRHNF GL+A+HGVSISHRS GSTG QDPGRV+K KKMAG +G +RVTV+N++V+S
Sbjct: 121 GVMKRHNFKGLKASHGVSISHRSQGSTGQCQDPGRVYKGKKMAGHLGNSRVTVQNIKVIS 180
Query: 182 VDDKRGLILVKGC-VPGAKKNSWILVRDSFKSAVN 215
VD ++ L++VKG +PGA+ S++ VRD+ K V
Sbjct: 181 VDKEKSLLVVKGNNIPGAQ-GSYLFVRDAIKKPVP 214
>gi|254796647|ref|YP_003081483.1| ribosomal protein L3 [Neorickettsia risticii str. Illinois]
gi|254589884|gb|ACT69246.1| ribosomal protein L3 [Neorickettsia risticii str. Illinois]
Length = 210
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 97/211 (45%), Positives = 132/211 (62%), Gaps = 7/211 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ +K+G T VY+ +PVT+L L+ V+ +++G + +V G K +
Sbjct: 3 RVGLLLKKVGCTSVYDDRSSLVPVTLLQLEENVVLS--AEERDGVVVTRVSFGTRK---L 57
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
KP + + + ++ EFRV P+GS + +F GQ VD G +IGKGF+
Sbjct: 58 KKPQLAYLRKLGLEKGGRVVEFRVSPRFVPEPLGS-LTVEHFRPGQYVDAVGTSIGKGFA 116
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRHNF GLRA+HGVSISHRS GSTG QDPG+VFK KKMAG MG RVT++NL V
Sbjct: 117 GVMKRHNFAGLRASHGVSISHRSGGSTGQCQDPGKVFKGKKMAGHMGNARVTMQNLLVQL 176
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + LI V+G VPG KNS++L+RD+ K
Sbjct: 177 VDVENCLIGVRGSVPGC-KNSYVLLRDALKK 206
>gi|15835429|ref|NP_297188.1| 50S ribosomal protein L3 [Chlamydia muridarum Nigg]
gi|270285609|ref|ZP_06195003.1| 50S ribosomal protein L3 [Chlamydia muridarum Nigg]
gi|270289619|ref|ZP_06195921.1| 50S ribosomal protein L3 [Chlamydia muridarum Weiss]
gi|301337005|ref|ZP_07225207.1| 50S ribosomal protein L3 [Chlamydia muridarum MopnTet14]
gi|13878709|sp|Q9PJL4|RL3_CHLMU RecName: Full=50S ribosomal protein L3
gi|7190843|gb|AAF39617.1| ribosomal protein L3 [Chlamydia muridarum Nigg]
Length = 221
Score = 169 bits (428), Expect = 3e-40, Method: Composition-based stats.
Identities = 80/218 (36%), Positives = 110/218 (50%), Gaps = 11/218 (5%)
Query: 1 MRS--GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58
MRS ++ +K GM V++ G + +V+ ++ V +T +GY AVQ+GA K
Sbjct: 1 MRSQLSLIGKKEGMMHVFDKNGNLVACSVISIEPNVVAQLKTASSDGYNAVQMGADAVKA 60
Query: 59 KNVSKPMR------GFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111
+ R G F + L E V ++ + +G F F VDV
Sbjct: 61 PEKTIEKRFSKALLGHFKKSGGCAFRVLKEVVVSEEAVQSVSLGDEFGVEIFDGVSNVDV 120
Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171
G++ GKGF G MK+ F G +HG S HR GS G R PGR F K MG +R
Sbjct: 121 CGISKGKGFQGVMKKFGFRGGPKSHG-SGFHRHAGSIGMRSTPGRCFPGSKRPSHMGCDR 179
Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
VTVKNLEVV VD R ++LVKG +PG K S ++V+ S
Sbjct: 180 VTVKNLEVVKVDLDRKVMLVKGAIPGF-KGSVVVVKRS 216
>gi|227509931|ref|ZP_03939980.1| 50S ribosomal protein L3 [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
gi|227512864|ref|ZP_03942913.1| 50S ribosomal protein L3 [Lactobacillus buchneri ATCC 11577]
gi|227522992|ref|ZP_03953041.1| 50S ribosomal protein L3 [Lactobacillus hilgardii ATCC 8290]
gi|227083864|gb|EEI19176.1| 50S ribosomal protein L3 [Lactobacillus buchneri ATCC 11577]
gi|227089810|gb|EEI25122.1| 50S ribosomal protein L3 [Lactobacillus hilgardii ATCC 8290]
gi|227190537|gb|EEI70604.1| 50S ribosomal protein L3 [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
Length = 211
Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats.
Identities = 77/214 (35%), Positives = 114/214 (53%), Gaps = 5/214 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ +K+GMT V+ G +PVTV+ + ++ +T + +GY AVQ+G + +
Sbjct: 3 RKGILGKKVGMTQVFTENGELVPVTVVEVTPNVIMQIKTAENDGYDAVQLGYADKRAVLT 62
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP +G N +PK+ + E + + D V F G +VDVTG T G G+
Sbjct: 63 NKPEQGHAKKANTTPKRFIKEIKDVELGD-YKVAEEVKADIFKPGDIVDVTGTTKGHGYQ 121
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G + + THG S HR GS G RV K+ GRMG VT++NLEVVS
Sbjct: 122 GNIHKDGQSRGPETHG-SRYHRRPGSLGVI--INRVVPGMKLPGRMGNKTVTIQNLEVVS 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D+ +IL+KG VPGA K S+I +R + + A
Sbjct: 179 TDNDNNVILIKGNVPGANK-SFITIRTAVRGANK 211
>gi|15829060|ref|NP_326420.1| 50S ribosomal protein L3 [Mycoplasma pulmonis UAB CTIP]
gi|42559684|sp|Q98PY0|RL3_MYCPU RecName: Full=50S ribosomal protein L3
gi|14090004|emb|CAC13762.1| 50S RIBOSOMAL PROTEIN L3 [Mycoplasma pulmonis]
Length = 266
Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats.
Identities = 80/221 (36%), Positives = 121/221 (54%), Gaps = 7/221 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT +++ G IPVT++ + V T +KNGY A+Q+ + K
Sbjct: 1 MKGILGRKVGMTQIFSDNGIVIPVTLIEVKPNIVSNVLTDEKNGYKAIQLSLEDKKKSRQ 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
KP G F+ N +PK+ + E R + +L GS S FT G+ VDVTG++ GKGF+
Sbjct: 61 RKPEIGHFAKANTTPKRFVKEIRDMQGFEL---GSNVDVSIFTPGEFVDVTGISKGKGFA 117
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP--GRVFKNKKMAGRMGGNRVTVKNLEV 179
G +KRHN +HG + TG D +V K M G +G +VT++NLEV
Sbjct: 118 GTIKRHNQKIGPKSHGGGGGSKPVRQTGSLGDISGNKVVKGMTMPGHLGHEQVTIQNLEV 177
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
+ D K ++LVKG VPG KK ++++++ K + K V
Sbjct: 178 IMTDVKNNILLVKGAVPGPKKG-FVVIKECAKK-IPSKEAV 216
>gi|227501134|ref|ZP_03931183.1| ribosomal protein L3 [Anaerococcus tetradius ATCC 35098]
gi|227216719|gb|EEI82120.1| ribosomal protein L3 [Anaerococcus tetradius ATCC 35098]
Length = 209
Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats.
Identities = 77/186 (41%), Positives = 108/186 (58%), Gaps = 1/186 (0%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
+ K+GMT V + +G PVTVL D VV +T++ +GY A+QVG + K KNV+KP
Sbjct: 4 IFTTKVGMTQVIDEDGVITPVTVLKADENVVVQVKTVETDGYNAIQVGYMDKKEKNVTKP 63
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+R F N S K+ L E + L +G + + F G +VDV + GKG GA+
Sbjct: 64 VREHFKKANASTKRYLREVNFGDETPELNLGDIITVEQFEAGDIVDVVATSKGKGTQGAI 123
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR N+G A+HG S SHR G+ DP RVFK +K +G+MG RVT++N+E+V V
Sbjct: 124 KRWNYGRGPASHG-SKSHRVAGARAAGSDPARVFKGRKGSGKMGNERVTIQNIEIVKVSV 182
Query: 185 KRGLIL 190
+ IL
Sbjct: 183 EDNYIL 188
>gi|325479159|gb|EGC82256.1| 50S ribosomal protein L3 [Anaerococcus prevotii ACS-065-V-Col13]
Length = 209
Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats.
Identities = 77/186 (41%), Positives = 109/186 (58%), Gaps = 1/186 (0%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
+ K+GMT V + +G PVTVL D VV +T++ +GY A+QVG + K KNV KP
Sbjct: 4 IFTTKVGMTQVIDEDGVITPVTVLKADENVVVQVKTVETDGYNAIQVGYMDKKEKNVKKP 63
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+R F N + K+ L E ++ L +G V + F G +VD+ + GKG GA+
Sbjct: 64 VREHFKKANAATKRYLKEVNFGEETPELNLGDVITVEQFEAGDIVDIVATSKGKGTQGAI 123
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR N+G A+HG S SHR G+ DP RVFK +K +G+MG RVT++N+EVV V+
Sbjct: 124 KRWNYGRGPASHG-SKSHRVAGARAAGSDPARVFKGRKGSGKMGNERVTIQNIEVVKVNV 182
Query: 185 KRGLIL 190
+ IL
Sbjct: 183 EDNYIL 188
>gi|195657099|gb|ACG48017.1| 50S ribosomal protein L3 [Zea mays]
Length = 267
Score = 169 bits (427), Expect = 4e-40, Method: Composition-based stats.
Identities = 78/211 (36%), Positives = 113/211 (53%), Gaps = 5/211 (2%)
Query: 3 SGVVARKLGMTCVYN-IEGRRIPVTVLHL--DNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
GV+A K+GM ++ G+ +PVTV+ V +T +GY AVQVG +
Sbjct: 50 VGVMATKVGMMTYFDPETGKPVPVTVVGFREGGNVVTQVKTAATDGYDAVQVGYHGVRED 109
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+++P G P + L EFR+ D P + F G L+DV+G +IGKG
Sbjct: 110 KLTRPELGHLGKAGAPPLRHLQEFRLTAVDAFEPGQPLDFADLFKEGDLIDVSGNSIGKG 169
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KRHNF THG S SHR GS G PGRV+K KKM GRMGG + ++ L++
Sbjct: 170 FQGGIKRHNFKRGLMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKI 228
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
V +D+ ++++KG VPG N + + +
Sbjct: 229 VKIDNNLRVLMIKGAVPGKPGN-LLRITPAK 258
>gi|15639182|ref|NP_218628.1| 50S ribosomal protein L3 [Treponema pallidum subsp. pallidum str.
Nichols]
gi|189025422|ref|YP_001933194.1| 50S ribosomal protein L3 [Treponema pallidum subsp. pallidum SS14]
gi|6094076|sp|O83219|RL3_TREPA RecName: Full=50S ribosomal protein L3
gi|226730585|sp|B2S2D6|RL3_TREPS RecName: Full=50S ribosomal protein L3
gi|3322453|gb|AAC65174.1| ribosomal protein L3 (rplC) [Treponema pallidum subsp. pallidum
str. Nichols]
gi|189017997|gb|ACD70615.1| ribosomal protein L3 [Treponema pallidum subsp. pallidum SS14]
gi|291059596|gb|ADD72331.1| 50S ribosomal protein L3 [Treponema pallidum subsp. pallidum str.
Chicago]
Length = 208
Score = 169 bits (427), Expect = 4e-40, Method: Composition-based stats.
Identities = 77/211 (36%), Positives = 114/211 (54%), Gaps = 5/211 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ +K+GMT +++ G PVTV+ +++ VV + +++ GY AV +G G K +
Sbjct: 1 MVGLIGQKVGMTQIFDARGCVTPVTVIRVEHNVVVGLKDVERFGYSAVILGTGCMKKSRI 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SKP G F+ + D VG V + +DV ++ GKGF
Sbjct: 61 SKPYAGQFAERIPPVRVMREFRGFTLDVS---VGQVLDVRVLESVRYLDVCALSKGKGFQ 117
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR F G R++HG S HR GSTG PGR FKN KM GRMG RVTV+NL +
Sbjct: 118 GVVKRWGFSGGRSSHG-SKFHREAGSTGQCTSPGRTFKNVKMPGRMGAERVTVQNLRIER 176
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+D G+++V+G VPG K + + +R + K
Sbjct: 177 IDVGLGVVMVRGAVPGRNK-ATVFLRTAVKR 206
>gi|194708314|gb|ACF88241.1| unknown [Zea mays]
Length = 262
Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats.
Identities = 78/211 (36%), Positives = 113/211 (53%), Gaps = 5/211 (2%)
Query: 3 SGVVARKLGMTCVYN-IEGRRIPVTVLHL--DNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
GV+A K+GM ++ G+ +PVTV+ V +T +GY AVQVG +
Sbjct: 45 VGVMATKVGMMTYFDPETGKPVPVTVVGFREGGNVVTQVKTAATDGYDAVQVGYHGVRED 104
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+++P G P + L EFR+ D P + F G L+DV+G +IGKG
Sbjct: 105 KLTRPELGHLGKAGAPPLRHLQEFRLTAVDAFEPGQPLDFADLFKEGDLIDVSGNSIGKG 164
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KRHNF THG S SHR GS G PGRV+K KKM GRMGG + ++ L++
Sbjct: 165 FQGGIKRHNFKRGLMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKI 223
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
V +D+ ++++KG VPG N + + +
Sbjct: 224 VKIDNNLRVLMIKGAVPGKPGN-LLRITPAK 253
>gi|330444113|ref|YP_004377099.1| 50S ribosomal protein L3 [Chlamydophila pecorum E58]
gi|328807223|gb|AEB41396.1| ribosomal protein L3 [Chlamydophila pecorum E58]
Length = 215
Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats.
Identities = 72/215 (33%), Positives = 116/215 (53%), Gaps = 9/215 (4%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK----- 59
++ +K GM V++ +G + +V+ ++ V +TL+K+GY ++Q+G+G+
Sbjct: 3 LMGKKEGMLHVFDKDGSLVACSVISIEPNVVTQIKTLEKDGYTSLQMGSGKESAPLKTLQ 62
Query: 60 -NVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
+K G + L E RV ++ +G+ F F VDV+G++ G
Sbjct: 63 KRYTKAKLGHLKKSRDQVFRVLKEVRVSEEVIGSTSLGAAFGIEVFEGVGAVDVSGVSKG 122
Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
KGF G MK++ F G +HG S HR GS G R PGR F K MG VT+KNL
Sbjct: 123 KGFQGVMKKYGFRGGPGSHG-SGFHRHAGSIGMRSTPGRCFPGSKRPSHMGSENVTIKNL 181
Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
EV+ +D +R ++LVKG +PG+ K S ++V+ S ++
Sbjct: 182 EVIKIDLERKVLLVKGAIPGS-KGSVVVVKRSSRA 215
>gi|58617356|ref|YP_196555.1| 50S ribosomal protein L3 [Ehrlichia ruminantium str. Gardel]
gi|58416968|emb|CAI28081.1| 50S ribosomal protein L3 [Ehrlichia ruminantium str. Gardel]
Length = 235
Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats.
Identities = 99/215 (46%), Positives = 144/215 (66%), Gaps = 5/215 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ K+G + +++ EG+RIPVT+LHL + VV + D +GY + V G N+
Sbjct: 8 RIGLLLEKVGHSAIFDNEGKRIPVTLLHLRDSFVVSIKDKDSHGYTS--VVFGMKVSTNM 65
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
KP N++ K+FE RV D+L+ V ++F Q VD+TG ++GKGF+
Sbjct: 66 KKPQLKILQKSNINVNCKIFESRVDHIDNLVVGAKVL-ITHFVENQYVDITGHSLGKGFA 124
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRHNF GL+A+HGVSISHRS GSTG QDPGRV+K KKMAG +G ++VTV+N++V+S
Sbjct: 125 GVMKRHNFKGLKASHGVSISHRSQGSTGQCQDPGRVYKGKKMAGHLGNSKVTVQNIKVIS 184
Query: 182 VDDKRGLILVKGC-VPGAKKNSWILVRDSFKSAVN 215
VD ++ L++VKG +PGA+ S++ VRD+ K +
Sbjct: 185 VDKEKSLLVVKGNNIPGAQ-GSYLFVRDAIKKPIP 218
>gi|28493521|ref|NP_787682.1| 50S ribosomal protein L3 [Tropheryma whipplei str. Twist]
gi|28572367|ref|NP_789147.1| 50S ribosomal protein L3 [Tropheryma whipplei TW08/27]
gi|42559617|sp|Q83FY6|RL3_TROWT RecName: Full=50S ribosomal protein L3
gi|42559618|sp|Q83I78|RL3_TROW8 RecName: Full=50S ribosomal protein L3
gi|28410498|emb|CAD66884.1| 50S ribosomal protein L3 [Tropheryma whipplei TW08/27]
gi|28476563|gb|AAO44651.1| 50S ribosomal protein L3 [Tropheryma whipplei str. Twist]
Length = 210
Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats.
Identities = 83/213 (38%), Positives = 121/213 (56%), Gaps = 9/213 (4%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDN-CQVVVHRTLDKNGYMAVQVGAGEAKVK 59
M ++ K+GMT ++ GRR+ V + +K+GY +Q+ G +
Sbjct: 1 MARALLGTKVGMTQIW--SGRRVVPVTAVAVTTNVVSQVKAPEKDGYSRLQIATGAIDPR 58
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V++P +G F+ ++P +++ D +G F P F GQLVDV G + GKG
Sbjct: 59 RVNRPRKGHFAKAGLTP-----RRFIREVDSEGSLGDEFGPEIFQEGQLVDVVGKSKGKG 113
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
FSG MKRHNF G+ ATHG +HR GS G P RVFK +MAGR+G +RVTV NL +
Sbjct: 114 FSGTMKRHNFQGVSATHGSHRNHRKPGSVGASSTPSRVFKGTRMAGRLGSSRVTVHNLRL 173
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V +D + GL+LV+G VPG+ S +++RD+ K
Sbjct: 174 VKIDSENGLLLVEGAVPGSS-GSPVIIRDAVKG 205
>gi|194894275|ref|XP_001978039.1| GG17909 [Drosophila erecta]
gi|190649688|gb|EDV46966.1| GG17909 [Drosophila erecta]
Length = 362
Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats.
Identities = 70/230 (30%), Positives = 110/230 (47%), Gaps = 15/230 (6%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49
R GV+ARK+G ++ G RI T+L + + V+ + ++ + +
Sbjct: 99 RCGVIARKIGQYPLWLKNGERIRTTLLQIADNHVIKYIPPEEYLPAQVPKIANLHKRGCI 158
Query: 50 QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109
VG+ ++K G F + V PKK L F V + L G+ S ++F +G V
Sbjct: 159 LVGSETTNPALLTKEYAGIFRNSGVLPKKNLARFIVSP-EAQLEAGTPLSVNHFRIGDFV 217
Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169
DV G T+ GF G +KRH F G+ A+HGV+ +HR G+ G + GRV+ KM G MG
Sbjct: 218 DVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHMGN 277
Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCKG 218
+K L V ++ K ++ V+G VPG + + D+ K
Sbjct: 278 RWRIIKGLRVWRINSKYNVMWVQGSSVPGP-TGGLVYIYDTILPLRKNKE 326
>gi|1185166|emb|CAA91649.1| 50S ribosomal protein L3 [Odontella sinensis]
Length = 196
Score = 167 bits (424), Expect = 7e-40, Method: Composition-based stats.
Identities = 76/195 (38%), Positives = 110/195 (56%), Gaps = 3/195 (1%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
MT +++ G IPVT+L + C + +T +GY A+Q+G G K++++P G
Sbjct: 1 MTQIFDESGNIIPVTILKVGPCVITQVKTDLNDGYNAIQIGYGTVSNKSLTQPELGHLQK 60
Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
N+ P K L EFRV ++ VG V + + GQ +DVTG + GKGFSG KRHNF
Sbjct: 61 SNIQPLKYLKEFRVNNPEE-FKVGQVVNVESLSTGQFIDVTGKSSGKGFSGLQKRHNFTR 119
Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
THG S +HR+ GS G PGRV KKMAG++G K L+++ V+ +++V
Sbjct: 120 GPMTHG-SKNHRAPGSIGMGTTPGRVLPGKKMAGQLGNKVTKTKKLKIIQVNGNENILVV 178
Query: 192 KGCVPGAKKNSWILV 206
KG VPG N + +
Sbjct: 179 KGSVPGKPGN-LVTI 192
>gi|215400772|ref|YP_002327533.1| ribosomal protein L3 [Vaucheria litorea]
gi|194441222|gb|ACF70950.1| ribosomal protein L3 [Vaucheria litorea]
Length = 196
Score = 167 bits (424), Expect = 7e-40, Method: Composition-based stats.
Identities = 76/198 (38%), Positives = 118/198 (59%), Gaps = 3/198 (1%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
MT V+ EG +PVTV+ + C V +T +GY A+Q+G + ++ ++K G
Sbjct: 1 MTQVFYKEGLAVPVTVIRIGPCLVTKIKTTTTDGYNAIQIGYCQVPIRKLTKGQLGHLKK 60
Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
V + P K L E+ KD + VG + + + F +GQLV+++G++IGKGFSG KR+NF
Sbjct: 61 VGLPPLKYLTEYN-FKDINEFYVGQILTINNFNLGQLVNISGLSIGKGFSGTCKRYNFKR 119
Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
THG S SH++ GS G PGRVF KKM G+ G +VT+ L+++ +D + L++V
Sbjct: 120 GPMTHG-SKSHKAPGSIGPGTTPGRVFPGKKMPGQHGNKKVTILKLKILGIDTEENLLVV 178
Query: 192 KGCVPGAKKNSWILVRDS 209
KG VPG N ++ + +
Sbjct: 179 KGSVPGKPGN-FLNITPA 195
>gi|255085138|ref|XP_002505000.1| ribosomal protein L3, chloroplast precursor [Micromonas sp. RCC299]
gi|226520269|gb|ACO66258.1| ribosomal protein L3, chloroplast precursor [Micromonas sp. RCC299]
Length = 276
Score = 167 bits (424), Expect = 7e-40, Method: Composition-based stats.
Identities = 80/209 (38%), Positives = 112/209 (53%), Gaps = 5/209 (2%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDN-CQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
GV K GMT ++ EG IPV+V+ + V +T+D +GY AVQV E +
Sbjct: 66 VGVFGNKAGMTQIFTDEGLCIPVSVIAVQKGNVVTQVKTVDTDGYNAVQVAYDEVADYKI 125
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G + V+P + L EFR+ + + FT G LVDV G +IGKG+
Sbjct: 126 TKPEVGHCAKAGVAPMRHLEEFRLAQAPAHELGQQLKPSEMFTAGDLVDVRGASIGKGWQ 185
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
GA+K++ F THG S SHR HGS G PGR++ KKM +MG VT + L+VV
Sbjct: 186 GAVKKYGFSRGLMTHG-SKSHRQHGSVGAGTTPGRIYPGKKMHSQMGNETVTARKLKVVK 244
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
V + I+VKG VPG + N + + +
Sbjct: 245 V--EDDCIIVKGSVPGKRGN-LLRIAPAK 270
>gi|51244976|ref|YP_064860.1| 50S ribosomal protein L3 [Desulfotalea psychrophila LSv54]
gi|81826871|sp|Q6AP71|RL3_DESPS RecName: Full=50S ribosomal protein L3
gi|50876013|emb|CAG35853.1| probable 50S ribosomal protein L3 [Desulfotalea psychrophila LSv54]
Length = 209
Score = 167 bits (423), Expect = 9e-40, Method: Composition-based stats.
Identities = 78/205 (38%), Positives = 107/205 (52%), Gaps = 2/205 (0%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G++ + +GMT VY G+ IPVTV+ C+V+ +T +GY AVQVG K V+K
Sbjct: 6 GILGKNIGMTRVYGEVGQAIPVTVVQAGPCKVLQVKTNATDGYNAVQVGFENKKSSRVNK 65
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
G F+ + + EFRV + + F G +VDV G + G+GF G
Sbjct: 66 AEAGHFAKSDSEGFYFVREFRVVDPATYNVGDMISVDALFKAGDIVDVQGTSKGRGFQGV 125
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
+KR F G S HR+ GS GC PGRV K KKM GRMG + V KN+ VV V
Sbjct: 126 IKRWGFKGGPGG-HGSKHHRAPGSIGCSAYPGRVVKGKKMPGRMGNDTVLKKNVTVVDVR 184
Query: 184 DKRGLILVKGCVPGAKKNSWILVRD 208
++L+KG +PGA KN + +
Sbjct: 185 IDENVVLLKGPMPGA-KNGLLKIYS 208
>gi|302822169|ref|XP_002992744.1| hypothetical protein SELMODRAFT_430901 [Selaginella moellendorffii]
gi|300139485|gb|EFJ06225.1| hypothetical protein SELMODRAFT_430901 [Selaginella moellendorffii]
Length = 222
Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 81/209 (38%), Positives = 113/209 (54%), Gaps = 3/209 (1%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
GV+ K+GM + +GR IPVTV+ + V +T +GY AVQVG + +
Sbjct: 7 IGVMGTKVGMMTHFMPDGRAIPVTVIGFHEGNIVTQVKTEPTDGYNAVQVGYLRVRDTKL 66
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G + + P + L EFR+ D + F VG LVDV+G +IGKGF
Sbjct: 67 TKPELGHLNKIGTIPMRHLQEFRLVSVDGFELSQRLNVEDIFKVGDLVDVSGKSIGKGFQ 126
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRHNF THG S SHR GS G PGRV+ KKM GRMG + ++ LE++
Sbjct: 127 GGIKRHNFKRGPMTHG-SKSHRQLGSIGAGTTPGRVYPGKKMPGRMGFQKTKIRKLEIIK 185
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
+D + +LVKG VPG + N + + +
Sbjct: 186 IDPELRAVLVKGAVPGKRGN-LLRITPAK 213
>gi|302824121|ref|XP_002993706.1| hypothetical protein SELMODRAFT_431753 [Selaginella moellendorffii]
gi|300138430|gb|EFJ05198.1| hypothetical protein SELMODRAFT_431753 [Selaginella moellendorffii]
Length = 222
Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 82/209 (39%), Positives = 114/209 (54%), Gaps = 3/209 (1%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
GV+ K+GM + +GR IPVTV+ + V +T +GY AVQVG + +
Sbjct: 7 IGVMGTKVGMMTHFMPDGRAIPVTVIGFHEGNIVTQVKTEPTDGYNAVQVGYLRVRDTKL 66
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G + + P + L EFR+ D P + F VG LVDV+G +IGKGF
Sbjct: 67 TKPELGHLNKIGTIPMRHLQEFRLVSVDGFEPSQRLNVEDIFKVGDLVDVSGKSIGKGFQ 126
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRHNF THG S SHR GS G PGRV+ KKM GRMG + ++ LE++
Sbjct: 127 GGIKRHNFKRGLMTHG-SKSHRQLGSIGAGTTPGRVYPGKKMPGRMGFQKTKIRKLEIIK 185
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
+D + +LVKG VPG + N + + +
Sbjct: 186 IDPELRAVLVKGAVPGKRGN-LLRITPAK 213
>gi|303282635|ref|XP_003060609.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458080|gb|EEH55378.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 215
Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 79/209 (37%), Positives = 112/209 (53%), Gaps = 5/209 (2%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLD-NCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
GV K GMT ++ +G +PVTV+ + V +T +GY AVQVG + +
Sbjct: 5 VGVFGNKAGMTQLFMDDGLCVPVTVIAVQAGNVVTQVKTEGTDGYNAVQVGYDQVADYKI 64
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G + V P + L EFR+++ D P + F G +VDV G +IGKG+
Sbjct: 65 TKPEVGHCAKAGVPPMRHLEEFRLKEASDHAPGQQLKPSEMFKEGDVVDVRGTSIGKGWQ 124
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
GA+K++ F THG S SHR HGS G PGR+F KKM +MG VT + L+V+
Sbjct: 125 GAVKKYGFSRGLMTHG-SKSHRQHGSVGAGTSPGRIFPGKKMHSQMGNETVTARKLKVMR 183
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
V + I+VKG VPG + N + V +
Sbjct: 184 V--EDDCIIVKGSVPGKRGN-LLRVAPAK 209
>gi|195478966|ref|XP_002100716.1| GE17217 [Drosophila yakuba]
gi|194188240|gb|EDX01824.1| GE17217 [Drosophila yakuba]
Length = 359
Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 70/230 (30%), Positives = 110/230 (47%), Gaps = 15/230 (6%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49
R GV+ARK+G ++ G RI T+L + + V+ + ++ + +
Sbjct: 96 RCGVIARKIGQYPLWLKNGERIRTTLLQIADNHVIKYIPPEEYLPAQVPTVANLHKRGCI 155
Query: 50 QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109
VG+ ++K G F + V PKK L F V + L G+ S ++F +G V
Sbjct: 156 LVGSETTNPALLTKEYAGIFRNSGVLPKKNLARFIVSP-EAQLEPGTPLSVNHFRIGDFV 214
Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169
DV G T+ GF G +KRH F G+ A+HGV+ +HR G+ G + GRV+ KM G MG
Sbjct: 215 DVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHMGN 274
Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCKG 218
+K L V ++ K ++ V+G VPG + + D+ K
Sbjct: 275 RWRKIKGLRVWRINSKYNVMWVQGSSVPGP-TGGLVYIYDTILPLRRNKE 323
>gi|331702080|ref|YP_004399039.1| 50S ribosomal protein L3 [Lactobacillus buchneri NRRL B-30929]
gi|329129423|gb|AEB73976.1| 50S ribosomal protein L3 [Lactobacillus buchneri NRRL B-30929]
Length = 211
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 72/214 (33%), Positives = 113/214 (52%), Gaps = 5/214 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ +K+GMT V+ G +PVTV+ + ++ +T++ +GY +VQ+G + +
Sbjct: 3 RKGILGKKVGMTQVFTENGELVPVTVVEVTPNVIMQIKTVENDGYDSVQLGYADKRTVLT 62
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP +G N +PK+ + E + + D V F G +VDVTG T G G+
Sbjct: 63 NKPEQGHAKKANTTPKRFIKEIKDVELGD-YKVSDEVKADIFKPGDIVDVTGTTKGHGYQ 121
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G + + THG S HR GS G RV K+ GRMG VT++NLE+V+
Sbjct: 122 GNIHKDGQSRGPETHG-SRYHRRPGSLGVI--INRVVPGMKLPGRMGNKTVTIQNLEIVN 178
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D ++L+KG VPGA K S+I +R + +
Sbjct: 179 ADTDNNVLLIKGNVPGANK-SYITIRSAVHGSNK 211
>gi|289740087|gb|ADD18791.1| mitochondrial ribosomal protein L3 [Glossina morsitans morsitans]
Length = 367
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 66/229 (28%), Positives = 111/229 (48%), Gaps = 15/229 (6%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH------------RTLDKNGYMAV 49
R+GV+ARK+G ++ G +I T+L + + + + + N Y +
Sbjct: 102 RTGVIARKIGQYPLWLKNGEKIRTTLLQVVENHAIKYTPPEEYKPAHRPKVAELNKYGCL 161
Query: 50 QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109
VGA ++K F + V+PK+ L F + + G+ + ++F VG V
Sbjct: 162 LVGAESCDPSILTKEYCNLFKNSGVTPKRHLVRFLISPSAA-ITPGTPLNANHFRVGDYV 220
Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169
DV G T+ GF G +KRH F G+ A+HGV+ +HR G+ G + GRV+ K+ G MG
Sbjct: 221 DVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRPGNIGGGGEKGRVWPGTKLPGHMGN 280
Query: 170 NRVTVKNLEVVSVDDKRGLILVKGC-VPGAKKNSWILVRDSFKSAVNCK 217
K L + +++K ++ V+G +PG+ N + + DS K
Sbjct: 281 RWRKAKGLRIWRINNKYNVLWVQGSAIPGS-TNGLVYIYDSILPLRRHK 328
>gi|194700790|gb|ACF84479.1| unknown [Zea mays]
Length = 230
Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats.
Identities = 78/211 (36%), Positives = 113/211 (53%), Gaps = 5/211 (2%)
Query: 3 SGVVARKLGMTCVYN-IEGRRIPVTVLHL--DNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
GV+A K+GM ++ G+ +PVTV+ V +T +GY AVQVG +
Sbjct: 13 VGVMATKVGMMTYFDPETGKPVPVTVVGFREGGNVVTQVKTAATDGYDAVQVGYHGVRED 72
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+++P G P + L EFR+ D P + F G L+DV+G +IGKG
Sbjct: 73 KLTRPELGHLGKAGAPPLRHLQEFRLTAVDAFEPGQPLDFADLFKEGDLIDVSGNSIGKG 132
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KRHNF THG S SHR GS G PGRV+K KKM GRMGG + ++ L++
Sbjct: 133 FQGGIKRHNFKRGLMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKI 191
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
V +D+ ++++KG VPG N + + +
Sbjct: 192 VKIDNNLRVLMIKGAVPGKPGN-LLRITPAK 221
>gi|195355411|ref|XP_002044185.1| GM22578 [Drosophila sechellia]
gi|194129474|gb|EDW51517.1| GM22578 [Drosophila sechellia]
Length = 362
Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats.
Identities = 68/230 (29%), Positives = 109/230 (47%), Gaps = 15/230 (6%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49
R GV+ARK+G ++ G RI T+L + + V+ + ++ + +
Sbjct: 99 RCGVIARKIGQYPLWLKNGERIRTTLLQIADNHVIKYIPPEEYLPAQVPKVANLHKRGCI 158
Query: 50 QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109
VG+ ++K G F + V PKK L F V + L G+ + ++F +G V
Sbjct: 159 LVGSETTNPALLTKEYAGIFRNSGVLPKKNLARFIVSP-EAQLAPGTPLNVNHFRIGDFV 217
Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169
DV G T+ GF G +KRH F G+ A+HGV+ +HR G+ G + GRV+ KM G MG
Sbjct: 218 DVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHMGN 277
Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCKG 218
+K L V ++ K ++ V+G V G + + D+ K
Sbjct: 278 RWRIIKGLRVWRINTKYNVMWVQGSSVAGP-TGGLVYIYDTILPFRKNKE 326
>gi|195566964|ref|XP_002107045.1| GD17236 [Drosophila simulans]
gi|194204442|gb|EDX18018.1| GD17236 [Drosophila simulans]
Length = 362
Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats.
Identities = 68/230 (29%), Positives = 109/230 (47%), Gaps = 15/230 (6%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49
R GV+ARK+G ++ G RI T+L + + V+ + ++ + +
Sbjct: 99 RCGVIARKIGQYPLWLKNGERIRTTLLQIADNHVIKYIPPEEYLPAQVPKVANLHKRGCI 158
Query: 50 QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109
VG+ ++K G F + V PKK L F V + L G+ + ++F +G V
Sbjct: 159 LVGSETTNPALLTKEYAGIFRNSGVLPKKNLARFIVSP-EAQLAPGTPLTVNHFRIGDFV 217
Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169
DV G T+ GF G +KRH F G+ A+HGV+ +HR G+ G + GRV+ KM G MG
Sbjct: 218 DVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHMGN 277
Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCKG 218
+K L V ++ K ++ V+G V G + + D+ K
Sbjct: 278 RWRIIKGLRVWRINTKYNVMWVQGSSVAGP-TGGLVYIYDTILPFRKNKE 326
>gi|24642280|ref|NP_511166.2| mitochondrial ribosomal protein L3 [Drosophila melanogaster]
gi|22832292|gb|AAF48508.2| mitochondrial ribosomal protein L3 [Drosophila melanogaster]
Length = 362
Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats.
Identities = 69/230 (30%), Positives = 109/230 (47%), Gaps = 15/230 (6%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49
R GV+ARK+G ++ G RI T+L + + V+ + ++ + +
Sbjct: 99 RCGVIARKIGQYPLWLKNGERIRTTLLQIVDNHVIKYIPPEEYLPAQVPTVANLHKRGCI 158
Query: 50 QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109
VG+ ++K G F + V PKK L F V + L G+ + ++F VG V
Sbjct: 159 LVGSETTNPALLTKEYAGIFRNSGVLPKKNLARFIVSP-EAQLAPGTPLNVNHFRVGDFV 217
Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169
DV G T+ GF G +KRH F G+ A+HGV+ +HR G+ G + GRV+ KM G MG
Sbjct: 218 DVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHMGN 277
Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCKG 218
+K L V ++ K ++ V+G V G + + D+ K
Sbjct: 278 RWRIIKGLRVWRINTKYNVMWVQGSSVAGP-TGGLVYIYDTILPTRKNKE 326
>gi|307128705|ref|YP_003880735.1| 50S ribosomal protein L3 [Candidatus Sulcia muelleri CARI]
gi|306483167|gb|ADM90037.1| 50S ribosomal protein L3 [Candidatus Sulcia muelleri CARI]
Length = 206
Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats.
Identities = 80/207 (38%), Positives = 129/207 (62%), Gaps = 5/207 (2%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
SG++ + +GMT +++ G IP T++ C V+ +T +K+GY + Q+G E K+ N +
Sbjct: 4 SGIIGKNIGMTSIFDESGCNIPCTIIEAGPCIVLQIKTKEKDGYDSCQLGFDEKKINNTN 63
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP+ GFF + +PKKK+FEF ++K + G + + F + V++TG++ GKGF G
Sbjct: 64 KPLLGFFKKIKSTPKKKIFEFYIKK---KIKSGDLIKLNIFNENEYVNITGISKGKGFQG 120
Query: 123 AMKRHNFG-GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
+KRH F +HG R+ GS G DP RVFK KMAGR+G +VT+K ++++
Sbjct: 121 VVKRHGFSGVGEKSHGQHNRSRAPGSIGAGSDPSRVFKGTKMAGRLGNKKVTIKKIKILK 180
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRD 208
+D + L++VKG VPG KNS++++R
Sbjct: 181 IDLIKNLLIVKGSVPG-HKNSYLIIRK 206
>gi|13507904|ref|NP_109853.1| 50S ribosomal protein L3 [Mycoplasma pneumoniae M129]
gi|2500227|sp|P75580|RL3_MYCPN RecName: Full=50S ribosomal protein L3
gi|1674371|gb|AAB96314.1| ribosomal protein L3 [Mycoplasma pneumoniae M129]
Length = 287
Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats.
Identities = 72/213 (33%), Positives = 111/213 (52%), Gaps = 6/213 (2%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G+ K+GM+ V+ R+P+TV++ + QV +T K+ Y A + + K ++K
Sbjct: 5 GIFGVKVGMSQVFTTNNERLPITVIYCEPNQVAGVKTEAKDKYSATLLSFDTVENKKLNK 64
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P +GFF N+ P K L E R + + + F VG+ VDV+ ++ G+GF+GA
Sbjct: 65 PQQGFFEKNNLKPTKHLQEIRNMTGFE--MGQQITPQNLFQVGEYVDVSAISKGRGFTGA 122
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDP---GRVFKNKKMAGRMGGNRVTVKNLEVV 180
+KR NF HG HR GS + RVFK KKM+G G +VTV+NL +V
Sbjct: 123 IKRWNFKIGPLGHGAGYPHRFQGSVQAGRGGASAQRVFKGKKMSGHYGHEKVTVQNLRIV 182
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D+ L+LV G + G + +L+R + K
Sbjct: 183 GFDEANMLVLVSGAIAGPE-GGVVLIRTAKKKP 214
>gi|239790528|dbj|BAH71819.1| ACYPI003905 [Acyrthosiphon pisum]
Length = 375
Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats.
Identities = 75/233 (32%), Positives = 110/233 (47%), Gaps = 17/233 (7%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTL--------------DKNGYM 47
R+G++ARKLG ++ G+ + T+L + + V+ + K
Sbjct: 109 RTGLIARKLGNYPMWLDNGKSVLSTLLQVIDNHVIKYIPPGEFNPPRKPYSCPNHKKPLG 168
Query: 48 AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107
+ VGA A + +K G F + PKK L F V + L G+ S+F G
Sbjct: 169 CLLVGAESADPQYFTKQYCGLFYREGMMPKKYLGRFMVSPEAALQ-PGTPLLASHFRPGD 227
Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167
+DV G TI +GF G MKRH F G+ ATHGV+ SHR G+ G + GR+F KM G M
Sbjct: 228 FIDVRGKTIDRGFQGVMKRHGFHGMPATHGVTKSHRRGGNVGHGGEKGRIFPGTKMPGHM 287
Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCKGK 219
G K E++ ++ K +I +KG PG K NS + + D+ K
Sbjct: 288 GNRYRLHKGAEILRINHKYNVIWIKGIASPG-KTNSIVYLYDTILPLRKHKSP 339
>gi|21430844|gb|AAM51100.1| SD19562p [Drosophila melanogaster]
Length = 362
Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats.
Identities = 69/230 (30%), Positives = 109/230 (47%), Gaps = 15/230 (6%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49
R GV+ARK+G ++ G RI T+L + + V+ + ++ + +
Sbjct: 99 RCGVIARKIGQYPLWLKNGERIRTTLLQIVDNHVIKYIPPEEYLPAQVPTVANLHKRGCI 158
Query: 50 QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109
VG+ ++K G F + V PKK L F V + L G+ + ++F VG V
Sbjct: 159 LVGSETTNPALLTKEYAGIFRNSGVLPKKNLARFIVSP-EAQLAPGTPLNVNHFRVGDFV 217
Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169
DV G T+ GF G +KRH F G+ A+HGV+ +HR G+ G + GRV+ KM G MG
Sbjct: 218 DVRGKTVDHGFQGVVKRHGFKGMPASHGVTKTHRRAGNIGGGGEKGRVWPGTKMPGHMGN 277
Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCKG 218
+K L V ++ K ++ V+G V G + + D+ K
Sbjct: 278 RWRIIKGLRVWRINTKYNVMWVQGSSVAGP-TGGLVYIYDTILPTRKNKE 326
>gi|166154743|ref|YP_001654861.1| 50S ribosomal protein L3 [Chlamydia trachomatis 434/Bu]
gi|166155618|ref|YP_001653873.1| 50S ribosomal protein L3 [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|301336017|ref|ZP_07224261.1| 50S ribosomal protein L3 [Chlamydia trachomatis L2tet1]
gi|226725148|sp|B0B8A2|RL3_CHLT2 RecName: Full=50S ribosomal protein L3
gi|226725150|sp|B0BCG7|RL3_CHLTB RecName: Full=50S ribosomal protein L3
gi|165930731|emb|CAP04228.1| LSU ribosomal protein L3P [Chlamydia trachomatis 434/Bu]
gi|165931606|emb|CAP07182.1| LSU ribosomal protein L3P [Chlamydia trachomatis
L2b/UCH-1/proctitis]
Length = 221
Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats.
Identities = 81/218 (37%), Positives = 112/218 (51%), Gaps = 11/218 (5%)
Query: 1 MRS--GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG---- 54
MRS ++ +K GM V++ G + +V+ +D V +T +GY AVQ+GA
Sbjct: 1 MRSQLSLIGKKEGMMHVFDKNGNLVACSVISVDANVVAQLKTASSDGYNAVQIGADVVQA 60
Query: 55 --EAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111
+ K SK + G F + L E V ++ + +G F F VD+
Sbjct: 61 PEKTIEKRFSKALLGHFKKSGGRACRVLKEVVVSEEAVQSVSLGDEFGLEIFDGVSNVDI 120
Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171
G++ GKGF G MK+ F G +HG S HR GS G R PGR F K MG +R
Sbjct: 121 CGISKGKGFQGVMKKFGFRGGPKSHG-SGFHRHAGSIGMRSTPGRCFPGSKRPSHMGCDR 179
Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
VTVKNLEVV VD R ++LVKG +PG K S ++V+ S
Sbjct: 180 VTVKNLEVVKVDLDRKVMLVKGAIPGF-KGSVVVVKRS 216
>gi|291230696|ref|XP_002735302.1| PREDICTED: mitochondrial ribosomal protein L3-like [Saccoglossus
kowalevskii]
Length = 349
Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats.
Identities = 72/210 (34%), Positives = 102/210 (48%), Gaps = 9/210 (4%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK--NGYMAVQVGAGEAKVK 59
R GV+A KLGM ++ +G R+ T+L L +C V+ + ++ Y + VGA A
Sbjct: 101 RCGVIAVKLGMMPLWTKQGERLQCTLLQLQDCCVIDYIPPEETQEKYGYLYVGAKNASPL 160
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
V K F + ++F G VDVT +IG G
Sbjct: 161 YVGKAYADLFKXXXXXXXXXXXXXX------XXXKRTPLYAAHFRPGMYVDVTARSIGHG 214
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G MKR G A+HG + +HR G+TG PGRV KKMAG+MG T NL+V
Sbjct: 215 FQGVMKRWGMKGQPASHGATKTHRKMGATGGGGKPGRVRLGKKMAGQMGNQLRTEVNLQV 274
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
V V+ + +I V G VPG S+++V+D+
Sbjct: 275 VRVNTRYNIIYVSGTVPGFHT-SFVVVKDA 303
>gi|255348905|ref|ZP_05380912.1| 50S ribosomal protein L3 [Chlamydia trachomatis 70]
gi|255503445|ref|ZP_05381835.1| 50S ribosomal protein L3 [Chlamydia trachomatis 70s]
gi|255507124|ref|ZP_05382763.1| 50S ribosomal protein L3 [Chlamydia trachomatis D(s)2923]
gi|289525573|emb|CBJ15051.1| LSU ribosomal protein L3P [Chlamydia trachomatis Sweden2]
gi|296435133|gb|ADH17311.1| 50S ribosomal protein L3 [Chlamydia trachomatis E/150]
gi|296438853|gb|ADH21006.1| 50S ribosomal protein L3 [Chlamydia trachomatis E/11023]
Length = 221
Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats.
Identities = 82/218 (37%), Positives = 113/218 (51%), Gaps = 11/218 (5%)
Query: 1 MRS--GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG---- 54
MRS ++ +K GM V++ G + +V+ +D V +T +GY AVQ+GA
Sbjct: 1 MRSQLSLIGKKEGMMHVFDKNGNLVACSVISVDANVVAQLKTASSDGYNAVQMGADVVQA 60
Query: 55 --EAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111
+ K SK + G F + L E V ++ + +G F F VD+
Sbjct: 61 PEKTIEKRFSKALLGHFKKSGGRACRVLKEVVVSEEAVQSVSLGDEFGLEIFDGVSNVDI 120
Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171
G++ GKGF G MK+ F G +HG S HR GSTG R PGR F K MG +R
Sbjct: 121 CGISKGKGFQGVMKKFGFRGGPKSHG-SGFHRHAGSTGMRSTPGRCFPGSKRPSHMGCDR 179
Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
VTVKNLEVV VD R ++LVKG +PG K S ++V+ S
Sbjct: 180 VTVKNLEVVKVDLDRKVMLVKGAIPGF-KGSVVVVKRS 216
>gi|297286892|ref|XP_001115583.2| PREDICTED: 39S ribosomal protein L3, mitochondrial [Macaca mulatta]
Length = 243
Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats.
Identities = 69/209 (33%), Positives = 100/209 (47%), Gaps = 3/209 (1%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAVQVGAGEAKVKNVSKPMRGFFS 70
M ++ +G + VT+L + +C V+ + + + NG A G+ + F
Sbjct: 1 MMPLWTKDGEKHVVTLLQVQDCHVLKYTSKENHNGKTAALSVGGKTVSRFRKATPVLEFY 60
Query: 71 SVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130
P K+ + D+ + G+ ++F GQ VDVT TIGKGF G +KR F
Sbjct: 61 RELGLPPKQTVKIFNITDNAAIKPGTPLYAAHFRPGQYVDVTAKTIGKGFQGVVKRWGFK 120
Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190
G ATHG + +HR G+ D GRV+ KM G+MG T L+V ++ K +I
Sbjct: 121 GQPATHGQTKTHRRPGALST-GDIGRVWPGTKMPGKMGNIYRTAYGLKVWRINTKHNIIY 179
Query: 191 VKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
V G VPG KN + VRDS A GK
Sbjct: 180 VNGSVPG-HKNCLVKVRDSKLPAYKDLGK 207
>gi|88658345|ref|YP_507227.1| 50S ribosomal protein L3 [Ehrlichia chaffeensis str. Arkansas]
gi|88599802|gb|ABD45271.1| ribosomal protein L3 [Ehrlichia chaffeensis str. Arkansas]
Length = 231
Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats.
Identities = 98/215 (45%), Positives = 144/215 (66%), Gaps = 5/215 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G+ K+G T +++ EG+RIP+T+LHL + ++ +T D +GY AV +G N+
Sbjct: 4 RIGLFLEKVGHTAIFDNEGKRIPITLLHLRDSFIISKKTKDIHGYDAVVLGVEA--SINL 61
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
KP ++ K K+FE RV D++ S ++F Q VD+TG ++GKGF+
Sbjct: 62 KKPQSKILEKSKITAKCKIFESRVDNLGDVVEGAK-VSITHFVKDQYVDITGYSLGKGFA 120
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRHNF GL+A+HGVSI+HRS GSTG QDPGRV+K KKMAG++G ++VTV+NL+V+
Sbjct: 121 GVMKRHNFKGLKASHGVSIAHRSQGSTGQCQDPGRVYKGKKMAGQLGNSKVTVQNLKVIL 180
Query: 182 VDDKRGLILVKGC-VPGAKKNSWILVRDSFKSAVN 215
VD +R L+ V+G +PGA K S++ V+D+ K +V
Sbjct: 181 VDQERSLLGVRGNNIPGA-KGSYVFVKDAVKKSVP 214
>gi|307189923|gb|EFN74159.1| 39S ribosomal protein L3, mitochondrial [Camponotus floridanus]
Length = 370
Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats.
Identities = 64/231 (27%), Positives = 113/231 (48%), Gaps = 17/231 (7%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK--------------NGYM 47
R+G++A+K+G+ ++ +G+++ T+L + + +VV + +K
Sbjct: 102 RTGLIAKKIGVYPLWLKDGKKVSSTLLQIVDNEVVKYMPPEKFHPVRSCKPPLQIKRRLG 161
Query: 48 AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107
+ VGA + V+K G F V PK+ L F + + L G+ ++F G+
Sbjct: 162 CLVVGAENIDPQWVTKEYYGMFKDTGVIPKRVLRRFIISPEAALQ-PGTPLIAAHFKPGE 220
Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167
+VD+ TI +GF G MKR F G+ A+HGV+ +HR G+ G RV KM G M
Sbjct: 221 IVDIRAKTIDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGRKARVMPGTKMPGHM 280
Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCK 217
G + +++ ++ K +I +KG +PG + NS+ + D+ K
Sbjct: 281 GNKWRVHRGQQILRINTKYNIIWIKGQNIPG-EINSYCHIYDTILPLRRHK 330
>gi|326511938|dbj|BAJ95950.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326521546|dbj|BAK00349.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 264
Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats.
Identities = 77/211 (36%), Positives = 115/211 (54%), Gaps = 5/211 (2%)
Query: 3 SGVVARKLGMTCVYNI-EGRRIPVTVLHL--DNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
GV+A K+GM ++ G+ +PVTV+ V +T +GY AVQVG +
Sbjct: 47 VGVMATKVGMMTYFDPANGKPVPVTVVGFREGGNVVTQVKTAATDGYDAVQVGYHGVRED 106
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+++P G + P + L EFR+ D P + F G LVDV+ +IGKG
Sbjct: 107 KLTRPELGHLGKASAPPLRHLQEFRLVAVDAFDPGQELEFNELFKEGDLVDVSAKSIGKG 166
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KRHNF THG S SHR+ GS G PGRV+K KKM GRMGG + ++ L++
Sbjct: 167 FQGGIKRHNFKRGLMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKI 225
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
V +D+ ++++KG +PG + N + + +
Sbjct: 226 VRIDNDLKVVMIKGAIPGKQGN-LLRITPAK 255
>gi|168034315|ref|XP_001769658.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679007|gb|EDQ65459.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 223
Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats.
Identities = 77/209 (36%), Positives = 110/209 (52%), Gaps = 3/209 (1%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ K+GM + +G +P TV+ + V +T +GY AVQVG + + +
Sbjct: 8 VGLMGTKMGMMTYFTEDGIAVPCTVVGFHEGNIVTQVKTDATDGYTAVQVGYRRVRDRKL 67
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G + V P + L EFRV + P + F G L+DV G +IGKGF
Sbjct: 68 TKPQLGHLNKVGAIPMRHLQEFRVVSAEGFEPNQRLQLEEMFKAGDLIDVVGDSIGKGFQ 127
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR+NF + THG S S R GS G PGRV+ KKM G+MG R V+ LE+V
Sbjct: 128 GGIKRYNFARGQMTHG-SKSKRQLGSIGAGTTPGRVYPGKKMPGQMGSGRTKVRKLEIVK 186
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
VD + +L+KG VPG N + + +
Sbjct: 187 VDPELRAVLIKGSVPGKPGN-LLRITPAK 214
>gi|88608492|ref|YP_506157.1| ribosomal protein L3 [Neorickettsia sennetsu str. Miyayama]
gi|88600661|gb|ABD46129.1| ribosomal protein L3 [Neorickettsia sennetsu str. Miyayama]
Length = 210
Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats.
Identities = 94/211 (44%), Positives = 131/211 (62%), Gaps = 7/211 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ +K+G T VY+ +P+T+L L+ V+ +++G + +V G K +
Sbjct: 3 RVGLLLKKVGCTSVYDDRFSLVPITLLQLEENVVLS--AEERDGVVIARVSFGTRK---L 57
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+P + + ++ EFRV P+GS + +F GQ VD G +IGKGF+
Sbjct: 58 KRPQSACLKKLGLEKGGRVVEFRVSPRFMPEPLGS-LTVEHFRPGQYVDAVGTSIGKGFA 116
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRHNF GLRA+HGVSISHRS GSTG QDPG+VFK KKMAG MG RVT++NL V
Sbjct: 117 GVMKRHNFAGLRASHGVSISHRSGGSTGQCQDPGKVFKGKKMAGHMGNARVTIQNLLVQL 176
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + LI V+G VPG KNS++L++D+ K
Sbjct: 177 VDVENCLIGVRGSVPGC-KNSYVLLKDALKK 206
>gi|194376318|dbj|BAG62918.1| unnamed protein product [Homo sapiens]
Length = 243
Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats.
Identities = 70/209 (33%), Positives = 102/209 (48%), Gaps = 3/209 (1%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAVQVGAGEAKVKNVSKPMRGFFS 70
M ++ +G++ VT+L + +C V+ + + + NG MA G+ + F
Sbjct: 1 MMPLWTKDGQKHVVTLLQVQDCHVLKYTSKENCNGKMATLSVGGKTVSRFRKATSILEFY 60
Query: 71 SVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130
P K+ + D+ + G+ ++F GQ VDVT TIGKGF G MKR F
Sbjct: 61 RELGLPPKQTVKIFNITDNAAIKPGTPLYAAHFRPGQYVDVTAKTIGKGFQGVMKRWGFK 120
Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLIL 190
G ATHG + +HR G+ D GRV+ KM G+MG T L+V ++ K +I
Sbjct: 121 GQPATHGQTKTHRRPGAVAT-GDIGRVWPGTKMPGKMGNIYRTEYGLKVWRINTKHNIIY 179
Query: 191 VKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
V G VPG KN + V+DS A GK
Sbjct: 180 VNGSVPG-HKNCLVKVKDSKLPAYKDLGK 207
>gi|301633145|gb|ADK86699.1| 50S ribosomal protein L3 [Mycoplasma pneumoniae FH]
Length = 287
Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats.
Identities = 70/213 (32%), Positives = 109/213 (51%), Gaps = 6/213 (2%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G+ K+GM+ V+ R+P+TV++ + QV + K+ Y A + + K ++K
Sbjct: 5 GIFGVKVGMSQVFTTNNERLPITVIYCEPNQVAGVKNEAKDKYSATLLSFDTVENKKLNK 64
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P +GFF N+ P K L E R + + + F VG+ VDV+ ++ G+GF+GA
Sbjct: 65 PQQGFFEKNNLKPTKHLQEIRNMTGFE--MGQQITPQNLFQVGEYVDVSAISKGRGFTGA 122
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQD---PGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+KR NF HG HR GS + RVFK KKM+G G +VTV+NL +V
Sbjct: 123 IKRWNFKIGPLGHGAGYPHRFQGSVQAGRGGASAQRVFKGKKMSGHYGHEKVTVQNLRIV 182
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
D+ L+LV G + G + + +R + K
Sbjct: 183 GFDEANMLVLVSGAIAGPE-GGVVFIRTAKKKP 214
>gi|254449111|ref|ZP_05062563.1| ribosomal protein L3 [gamma proteobacterium HTCC5015]
gi|198261303|gb|EDY85596.1| ribosomal protein L3 [gamma proteobacterium HTCC5015]
Length = 176
Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats.
Identities = 78/175 (44%), Positives = 103/175 (58%), Gaps = 2/175 (1%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK-NGYMAVQVGAGEAKVK 59
M G+V RK GMT V+ +G +PVTV+ +V ++ + +GY ++QV GE +
Sbjct: 1 MAIGLVGRKAGMTRVFTEDGVSVPVTVIEAAPNRVTQVKSQEAADGYSSLQVTKGERRAS 60
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSV-FSPSYFTVGQLVDVTGMTIGK 118
V+KPM G ++ V L+EFR++ ++ F GQ VDV G +IGK
Sbjct: 61 RVTKPMAGHYAKAGVEAGDGLWEFRLEGEEGEGIEVGGELKVDLFEAGQKVDVIGTSIGK 120
Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
GF G +KRHNF ATHG SISHR+ GSTG Q PGRVFK K+MAG MG RVT
Sbjct: 121 GFQGGIKRHNFRSQDATHGNSISHRAPGSTGQCQTPGRVFKGKRMAGHMGSKRVT 175
>gi|15605257|ref|NP_220043.1| 50S ribosomal protein L3 [Chlamydia trachomatis D/UW-3/CX]
gi|76789265|ref|YP_328351.1| 50S ribosomal protein L3 [Chlamydia trachomatis A/HAR-13]
gi|237802957|ref|YP_002888151.1| 50S ribosomal protein L3 [Chlamydia trachomatis B/Jali20/OT]
gi|237804879|ref|YP_002889033.1| 50S ribosomal protein L3 [Chlamydia trachomatis B/TZ1A828/OT]
gi|255311346|ref|ZP_05353916.1| 50S ribosomal protein L3 [Chlamydia trachomatis 6276]
gi|255317647|ref|ZP_05358893.1| 50S ribosomal protein L3 [Chlamydia trachomatis 6276s]
gi|7674297|sp|O84533|RL3_CHLTR RecName: Full=50S ribosomal protein L3
gi|109893421|sp|Q3KLG9|RL3_CHLTA RecName: Full=50S ribosomal protein L3
gi|3328965|gb|AAC68129.1| L3 Ribosomal Protein [Chlamydia trachomatis D/UW-3/CX]
gi|76167795|gb|AAX50803.1| LSU ribosomal protein L3P [Chlamydia trachomatis A/HAR-13]
gi|231273179|emb|CAX10092.1| LSU ribosomal protein L3P [Chlamydia trachomatis B/TZ1A828/OT]
gi|231274191|emb|CAX10985.1| LSU ribosomal protein L3P [Chlamydia trachomatis B/Jali20/OT]
gi|296436061|gb|ADH18235.1| 50S ribosomal protein L3 [Chlamydia trachomatis G/9768]
gi|296436989|gb|ADH19159.1| 50S ribosomal protein L3 [Chlamydia trachomatis G/11222]
gi|296437922|gb|ADH20083.1| 50S ribosomal protein L3 [Chlamydia trachomatis G/11074]
gi|297140422|gb|ADH97180.1| 50S ribosomal protein L3 [Chlamydia trachomatis G/9301]
gi|297748658|gb|ADI51204.1| LSU ribosomal protein L3P [Chlamydia trachomatis D-EC]
gi|297749538|gb|ADI52216.1| LSU ribosomal protein L3P [Chlamydia trachomatis D-LC]
Length = 221
Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats.
Identities = 82/218 (37%), Positives = 113/218 (51%), Gaps = 11/218 (5%)
Query: 1 MRS--GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG---- 54
MRS ++ +K GM V++ G + +V+ +D V +T +GY AVQ+GA
Sbjct: 1 MRSQLSLIGKKEGMMHVFDKNGNLVACSVISVDANVVAQLKTASSDGYNAVQMGADVVQA 60
Query: 55 --EAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111
+ K SK + G F + L E V ++ + +G F F VD+
Sbjct: 61 PEKTIEKRFSKALLGHFKKSGGRVCRVLKEVVVSEEAVQSVSLGDEFGLEIFDGVSNVDI 120
Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171
G++ GKGF G MK+ F G +HG S HR GSTG R PGR F K MG +R
Sbjct: 121 CGISKGKGFQGVMKKFGFRGGPKSHG-SGFHRHAGSTGMRSTPGRCFPGSKRPSHMGCDR 179
Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
VTVKNLEVV VD R ++LVKG +PG K S ++V+ S
Sbjct: 180 VTVKNLEVVKVDLDRKVMLVKGAIPGF-KGSVVVVKRS 216
>gi|307297394|ref|ZP_07577200.1| 50S ribosomal protein L3 [Thermotogales bacterium mesG1.Ag.4.2]
gi|306916654|gb|EFN47036.1| 50S ribosomal protein L3 [Thermotogales bacterium mesG1.Ag.4.2]
Length = 210
Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 86/214 (40%), Positives = 124/214 (57%), Gaps = 8/214 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN- 60
G++ RKLGMT +Y +G+ VTV+ C VV +T D Y A+QVG E +
Sbjct: 1 MKGILGRKLGMTTIY-KDGKAFGVTVVKAGPCTVVQKKTSDGGEYDAIQVGFEELTPERA 59
Query: 61 ---VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
++KP+ F + V P + L EF+V +D VG + F+ G+ VDVTG + G
Sbjct: 60 KKVLTKPLVKKFEAAKVKPHRILKEFKVGNIND-FNVGDIIEARVFSEGEKVDVTGFSKG 118
Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
+GFSGAMKR NF G A+HG S HR GS G +P +++K KKM G+ G + TVKNL
Sbjct: 119 RGFSGAMKRWNFRGGEASHG-SKFHRELGSVGNHTEPAKIWKGKKMPGQYGNEKKTVKNL 177
Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
VV VD + GL+ + G VPGA + ++++ + +
Sbjct: 178 TVVKVDAENGLLAIYGAVPGA-RGGLLVIKSANR 210
>gi|328781504|ref|XP_625054.3| PREDICTED: 39S ribosomal protein L3, mitochondrial [Apis mellifera]
Length = 364
Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats.
Identities = 60/231 (25%), Positives = 111/231 (48%), Gaps = 15/231 (6%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGY------------MAV 49
R+G++ +K+G+ ++ GR++ T++ + + +VV + ++ +
Sbjct: 101 RTGLIGKKIGVYPMWLKNGRKVLTTLIQIVDNEVVKYIPPEEYKPVKPIRHRIEVKNGCL 160
Query: 50 QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109
+GA + ++K G F+ V+PKK L F + + +L G+ ++F G+ +
Sbjct: 161 VLGAINVDPQLLTKEYYGIFNKAGVTPKKVLMRFTISPNA-VLQPGTPLYATHFKPGEFI 219
Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169
D+ G TI +GF G MKR F G+ A+HGV+ +HR G+ G RV KM G MG
Sbjct: 220 DIRGKTIDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGKLARVMPGTKMPGHMGN 279
Query: 170 NRVTVKNLEVVSVDDKRGLILV-KGCVPGAKKNSWILVRDSFKSAVNCKGK 219
+K ++++ ++ K +I V VPG N+ + D+
Sbjct: 280 RWRILKGVKILRINTKYNVIWVLAQNVPGEL-NTMCYLYDTILPTKKSTSP 329
>gi|325973271|ref|YP_004250335.1| 50S ribosomal protein L3 [Mycoplasma suis str. Illinois]
gi|325989706|ref|YP_004249405.1| 50S ribosomal protein L3 [Mycoplasma suis KI3806]
gi|323574791|emb|CBZ40451.1| 50S ribosomal protein L3 [Mycoplasma suis]
gi|323651873|gb|ADX97955.1| 50S ribosomal protein L3 [Mycoplasma suis str. Illinois]
Length = 230
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 78/217 (35%), Positives = 120/217 (55%), Gaps = 5/217 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGE-AKVK 59
M V+ +K+GM+ +++ G IPVT+L L QV+ +T++K GY A+ VG GE + +
Sbjct: 1 MSREVICQKIGMSSIFSEGGELIPVTLLKLIPLQVLSCKTVEKEGYNALVVGVGEECEER 60
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+SKP+RG F V+ ++K+ E + V F +G+ + + G++ G G
Sbjct: 61 KLSKPVRGQFQKKGVALRRKITELSWDGIKEYSVGNFVSFSDLFQIGEKIKIQGVSRGMG 120
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGS---TGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
F+GA+KR NF THG HR GS P +V+K KKM+GRMGG T+ N
Sbjct: 121 FTGAIKRWNFATGPKTHGAGYPHRFQGSLETGRGGMSPQKVWKGKKMSGRMGGENCTILN 180
Query: 177 LEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
L +V +D + ++ VKG +PG KK + VR K+
Sbjct: 181 LRIVHIDSENNIVAVKGSIPGRKKR-LVRVRSLHKAK 216
>gi|71276484|ref|ZP_00652759.1| Ribosomal protein L3 [Xylella fastidiosa Dixon]
gi|71162661|gb|EAO12388.1| Ribosomal protein L3 [Xylella fastidiosa Dixon]
Length = 186
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 86/186 (46%), Positives = 114/186 (61%), Gaps = 2/186 (1%)
Query: 27 VLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQ 86
++ +VV +T D +GY A+QV G + V+KP G F+ V + L+EFRV+
Sbjct: 1 LIEATANRVVQIKTSDVDGYDAIQVTVGSRRSVLVNKPESGHFAKAKVEAGRGLWEFRVE 60
Query: 87 KDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSH 145
K VGS S F VGQ VD+ G+T GKGF G +KRHNF ATHG S+SHR+
Sbjct: 61 KTQLGSYSVGSEVGLSIFAVGQKVDIQGITKGKGFQGTIKRHNFRMGDATHGNSLSHRAP 120
Query: 146 GSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWIL 205
GS G RQ PGRVF KKM+G MG R +V+NLEV+ +D +R LI V+G +PGA +L
Sbjct: 121 GSLGQRQTPGRVFPGKKMSGHMGAVRQSVQNLEVIKIDVERFLIAVRGAIPGAS-GGDVL 179
Query: 206 VRDSFK 211
+R + K
Sbjct: 180 IRSASK 185
>gi|227485525|ref|ZP_03915841.1| ribosomal protein L3 [Anaerococcus lactolyticus ATCC 51172]
gi|227236524|gb|EEI86539.1| ribosomal protein L3 [Anaerococcus lactolyticus ATCC 51172]
Length = 211
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 78/186 (41%), Positives = 109/186 (58%), Gaps = 1/186 (0%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
+ K+GMT V + +G PVTVL D VV +T D +GY A+QVG + K KNV KP
Sbjct: 4 IFTTKVGMTQVIDEDGVITPVTVLKADENVVVQVKTTDVDGYNAIQVGTVDKKEKNVKKP 63
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+RG + S K+ L E + ++ L G + F G+LVDV ++ GKG GA+
Sbjct: 64 IRGHYDKAGASYKRYLKEINLGEEVTELKAGDKITVDVFEEGELVDVVAISKGKGTQGAI 123
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR N+G A+HG S SHR G+ DP RVFK +K +G+MG RVT++N++VV V+
Sbjct: 124 KRWNYGRGPASHG-SKSHRVAGARAAGSDPSRVFKGRKGSGKMGHERVTIQNVKVVKVNA 182
Query: 185 KRGLIL 190
+ IL
Sbjct: 183 EDSYIL 188
>gi|91082959|ref|XP_973661.1| PREDICTED: similar to Mitochondrial 39S ribosomal protein L3
[Tribolium castaneum]
gi|270007629|gb|EFA04077.1| hypothetical protein TcasGA2_TC014311 [Tribolium castaneum]
Length = 355
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 75/222 (33%), Positives = 117/222 (52%), Gaps = 15/222 (6%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49
R+GV+ARK+G+ ++ G++I T+L + + QV+ + T + N +
Sbjct: 93 RTGVIARKIGIYPMWLKNGKKISTTLLQVLDNQVIKYYTPESYNPPRPRAGRVSNRKGCL 152
Query: 50 QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109
+GA + ++ G F V PKK L F V D LP G+ S +F VG V
Sbjct: 153 LLGAEQGDPSEFTREYCGIFKDSGVIPKKTLARFFVSPDAA-LPPGTSISALHFCVGNYV 211
Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169
DV G+TI +GF G MKRH F G+ A+HGV+ +HR G+ G + GRV+ KM G MG
Sbjct: 212 DVRGLTIDRGFQGVMKRHGFKGMPASHGVTKTHRRGGNIGGGGEKGRVWPGTKMPGHMGN 271
Query: 170 NRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSF 210
++ L++ ++ K ++ V G +PGA NS + + D+
Sbjct: 272 RYRILRALKIWRINTKYNVLYVSGQNIPGA-TNSIVYIYDTK 312
>gi|89898720|ref|YP_515830.1| 50S ribosomal protein L3 [Chlamydophila felis Fe/C-56]
gi|109893420|sp|Q252V3|RL3_CHLFF RecName: Full=50S ribosomal protein L3
gi|89332092|dbj|BAE81685.1| 50S ribosomal protein L3 [Chlamydophila felis Fe/C-56]
Length = 221
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 75/209 (35%), Positives = 109/209 (52%), Gaps = 10/209 (4%)
Query: 1 MRS--GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58
MRS ++ +K GM V++ +G + +V+ + V + +GY A+Q+GA E V
Sbjct: 1 MRSQLSLMGKKEGMIHVFDKDGNLVACSVISMSPNVVSQIKVDSTDGYNAIQMGADEISV 60
Query: 59 K------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111
V+KP+ G F + L E RV +D + +GS F F VD+
Sbjct: 61 PEKTLQKRVNKPILGHFKKSGSRVFRTLKEVRVSEDAVNEASLGSEFGLEVFEDVSSVDI 120
Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171
+G++ GKGF G MK+ F G THG S HR GS G R PGR F K MG
Sbjct: 121 SGVSKGKGFQGVMKKFGFRGGPKTHG-SGFHRHAGSIGMRSTPGRCFPGSKRPSHMGAVN 179
Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKK 200
VT+KNLEV+ +D ++ ++LVKG +PG +
Sbjct: 180 VTIKNLEVIKIDLEKKVLLVKGAIPGPRG 208
>gi|156089107|ref|XP_001611960.1| 50S ribosomal protein L3 [Babesia bovis T2Bo]
gi|154799214|gb|EDO08392.1| 50S ribosomal protein L3, putative [Babesia bovis]
Length = 350
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 82/209 (39%), Positives = 112/209 (53%), Gaps = 4/209 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R GV+A KLG +++ G R VTV H+D C V+ RT+ ++GY AVQ+G G +
Sbjct: 91 RCGVLAYKLGCMSLWDDWGERHMVTVCHVDRCVVLEKRTIAEHGYEAVQLGLGYRNINRQ 150
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SK G F V K + EF+ D LLPVG S +FT GQ V V+G + KGF
Sbjct: 151 SKQNIGRFIKAGVGSKDHIAEFKCSS-DCLLPVGHYMSVRHFTPGQWVFVSGWSQPKGFQ 209
Query: 122 GAMKRHNFGGLRATHGVSIS-HRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
GAM+R +FGG A+HG H + GS + V++ KM G G + V N V
Sbjct: 210 GAMRRWHFGGQNASHGTECKAHSAPGSIAQGKSAHIVWRGTKMGGHKGPDPR-VTNCRVF 268
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDS 209
++ R LI +KG VPG S + +RD+
Sbjct: 269 RIEAHRNLIFLKGTVPG-DVMSVLKIRDA 296
>gi|168704969|ref|ZP_02737246.1| 50S ribosomal protein L3 [Gemmata obscuriglobus UQM 2246]
Length = 302
Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 86/295 (29%), Positives = 128/295 (43%), Gaps = 75/295 (25%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTL------DKNGYMAVQVGAG 54
M G++ K+GMT V+ EG+ PVTVL L C V+ + K+GY A+Q+G
Sbjct: 1 MALGLIGYKVGMTQVFTPEGKAEPVTVLQLGPCPVLQIKYPSAEGGAAKDGYTAIQLGFK 60
Query: 55 EAKVKNVSKPMRGFFS--------------------SVNVSPKKKLFEFRVQ-------- 86
+ K K+ ++P +G + + P+K + EFR+
Sbjct: 61 DKKRKSATRPEQGHVAAGLKSKRKDARQKAGVVLPPKADCEPQKVIREFRIDLGGAFVQT 120
Query: 87 -------------------------------KDDDLLPVGSVFSPS-YFTVGQLVDVTGM 114
+D L VG + F Q VDV G
Sbjct: 121 GTIKAGPAEASFKVERIKVSGEGATQKHELYTEDVTLKVGDKLTVDQVFKDVQAVDVIGT 180
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC---RQDPGRVFKNKKMAGRMGGNR 171
T G+G++G MKRHNF G+ A HG HR GST + GR K + AG+ G R
Sbjct: 181 TKGRGYTGVMKRHNFDGMPAAHGAKKVHRQAGSTASLASNRGTGRPKKGLRRAGQYGNER 240
Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK-----SAVNCKGKVS 221
VT++NL VV VD + L+L++G +PG + ++VR + K K +V+
Sbjct: 241 VTIRNLTVVKVDVENNLMLIRGGIPGF-NGAVVMVRPTNKVGPGSPKAKTKARVA 294
>gi|321468355|gb|EFX79340.1| hypothetical protein DAPPUDRAFT_212601 [Daphnia pulex]
Length = 374
Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 73/231 (31%), Positives = 112/231 (48%), Gaps = 16/231 (6%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD--------------KNGYM 47
RSGV+AR +G +++ +G +I TVLH+ + V+ + + K
Sbjct: 111 RSGVIARNIGRQQMWDKDGNKIVCTVLHVLDNHVIRYIPPEEYVKTSRGAIHFKNKTPLG 170
Query: 48 AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107
+ VGA + ++ F+ V + PKK L F + + LP + + +F VGQ
Sbjct: 171 CLVVGAEATNPEKFTRQYCNLFAEVGLMPKKTLSRFIITPNAA-LPPCTPITAGHFLVGQ 229
Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167
VDV G T+ GF G +KR F G A+HG + HR G+ G +D RV+ KM G M
Sbjct: 230 AVDVYGKTVDHGFQGVVKRWGFKGGPASHGATKFHRRGGTIGTGRDKARVWPGTKMPGHM 289
Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
G R + L ++ ++ K +I VKG VPGA NS + + D+ K
Sbjct: 290 GSERRYNRGLMIMRINMKYNVIYVKGTVPGA-TNSIVRIFDTLLPLRKFKE 339
>gi|258620527|ref|ZP_05715565.1| 50S ribosomal protein L3 [Vibrio mimicus VM573]
gi|258587406|gb|EEW12117.1| 50S ribosomal protein L3 [Vibrio mimicus VM573]
Length = 167
Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 73/168 (43%), Positives = 101/168 (60%), Gaps = 1/168 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT V+ +G IPVTV+ ++ +V +TL+ +GY A+QV AG K V
Sbjct: 1 MIGLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTAGSKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F+ V + L+EFR++ ++ VGS + F + VDVTG + GKGF
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRLENGEE-FAVGSELTVELFNEVKKVDVTGTSKGKGFQ 119
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169
GA+KR NF THG S+SHR+ GS G Q PGRVFK KK+ G
Sbjct: 120 GAVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKIGRSHGC 167
>gi|115444097|ref|NP_001045828.1| Os02g0137200 [Oryza sativa Japonica Group]
gi|113535359|dbj|BAF07742.1| Os02g0137200 [Oryza sativa Japonica Group]
Length = 274
Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats.
Identities = 79/211 (37%), Positives = 116/211 (54%), Gaps = 5/211 (2%)
Query: 3 SGVVARKLGMTCVYNI-EGRRIPVTVLHL--DNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
GV+A K+GM ++ G+ +PVTV+ V +T +GY AVQVG + +
Sbjct: 57 VGVMATKVGMMTYFDPATGKPVPVTVVGFREGGNVVTQVKTAATDGYDAVQVGYHGVREE 116
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+++P G P + L EFR+Q D P + F G LVD++G +IGKG
Sbjct: 117 KLTRPELGHLGKAGAPPLRHLQEFRLQSVDGYDPGQPLDFADMFKEGDLVDISGKSIGKG 176
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G +KRHNF THG S SHR+ GS G PGRV+K KKM GRMGG + ++ L++
Sbjct: 177 FQGGIKRHNFKRGLMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKI 235
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
V +D+ ++++KG VPG N + + +
Sbjct: 236 VKIDNDLKVVMIKGAVPGKPGN-LLRIAPAK 265
>gi|156553318|ref|XP_001600461.1| PREDICTED: similar to Mitochondrial 39S ribosomal protein L3
[Nasonia vitripennis]
Length = 375
Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats.
Identities = 65/230 (28%), Positives = 108/230 (46%), Gaps = 14/230 (6%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQ----------- 50
R GV+ARK+G+ ++ +G+++ T+ + + V+ + ++ M Q
Sbjct: 105 RVGVLARKIGIVPMWMKDGKKVLTTMFQVADNHVIKYIPPEEYKPMITQKKNPLPRNTGC 164
Query: 51 --VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQL 108
VGA + +K G F+ V PK+ L F V + L G+ +++ +GQ
Sbjct: 165 LLVGADSCDPQLFTKEYCGLFNEAGVMPKRLLARFHVSPEGALQ-PGTPLFATHYKIGQY 223
Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168
+D+ G TI +GF G MKR F G+ A+HGV+ +HR G+ G RV K+ G MG
Sbjct: 224 IDIRGKTIDRGFQGVMKRWGFHGMPASHGVTKTHRRPGNIGSGGKKARVMPGTKLPGHMG 283
Query: 169 GNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
VK +V ++ + +I V G + NS + D+ CK
Sbjct: 284 NRYRIVKAQRIVRINTRYNVIWVLGQASAGETNSLVQFYDTIVPLKTCKA 333
>gi|224123986|ref|XP_002319213.1| predicted protein [Populus trichocarpa]
gi|222857589|gb|EEE95136.1| predicted protein [Populus trichocarpa]
Length = 222
Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats.
Identities = 81/209 (38%), Positives = 115/209 (55%), Gaps = 3/209 (1%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
GV+ KLGM + G+ +PVTV+ + V +T +GY AVQVG + K +
Sbjct: 7 VGVMGTKLGMMTYFEPNGKVVPVTVVGFREGNIVTQIKTDATDGYDAVQVGYRRVRDKKL 66
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G V P + L EFR+Q D + F G LVDV+G TIGKGF
Sbjct: 67 TKPEMGHLEKAGVIPMRHLQEFRLQGLDGFEIGQKLLFEELFKEGDLVDVSGTTIGKGFQ 126
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRHNF +HG S SHR+ GS G PGRV+K KKM GRMGG + ++ L++V
Sbjct: 127 GGIKRHNFKRGPMSHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVK 185
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
+D+ ++++KG +PG N + + +
Sbjct: 186 IDNDLRVVMIKGALPGKPGN-LLRIAPAK 213
>gi|226226279|ref|YP_002760385.1| 50S ribosomal protein L3 [Gemmatimonas aurantiaca T-27]
gi|226089470|dbj|BAH37915.1| 50S ribosomal protein L3 [Gemmatimonas aurantiaca T-27]
Length = 227
Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats.
Identities = 71/227 (31%), Positives = 103/227 (45%), Gaps = 22/227 (9%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEA----- 56
G++ RKLGMT ++N G+++P TV+ V T+D+ G+ +V++G G
Sbjct: 1 MIGIIGRKLGMTQLFNELGQQVPCTVVEATPNPVTKVSTVDQAGFASVELGFGAQRVARA 60
Query: 57 --------KVKNVSKPMRGFFSSVNVSPKKKLFEFR-------VQKDDDLLPVGSVFSPS 101
K SK G + + + + G +
Sbjct: 61 NKKGERTPKGHRASKAEVGHAKKAGLDAPPAVLKSFRLDDAPGKNPEIPTYTPGDKITVD 120
Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
FT G+ V VTG + G+GF G +KRH F G THG + HR GS G DP RV K K
Sbjct: 121 IFTPGERVKVTGTSKGRGFQGVVKRHGFHGGPNTHGNTK-HRKPGSIGAGTDPSRVIKGK 179
Query: 162 KMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRD 208
KM G+ G + T N+ + VD +R LI ++G V G N + VR
Sbjct: 180 KMPGQYGNTQHTALNIRIEKVDTERNLIYLRGSVAGP-TNGILFVRK 225
>gi|313847648|emb|CBY16636.1| putative 50s ribosomal protein [Chlamydophila psittaci RD1]
gi|325507077|gb|ADZ18715.1| 50S ribosomal protein L3 [Chlamydophila psittaci 6BC]
gi|328914285|gb|AEB55118.1| ribosomal protein L3 [Chlamydophila psittaci 6BC]
Length = 221
Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats.
Identities = 75/209 (35%), Positives = 110/209 (52%), Gaps = 10/209 (4%)
Query: 1 MRS--GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58
MRS ++ +K GM V++ +G + +V+ + + V + +GY A+Q+GA E V
Sbjct: 1 MRSQLSLMGKKEGMIHVFDKDGNLVACSVISMSSNVVTQIKVDSTDGYNAIQMGANEINV 60
Query: 59 K------NVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDV 111
V+KP G F + L E R+ ++ + + +GS F F VD+
Sbjct: 61 PEKTLQKRVNKPSLGHFKKSGSRVFRSLKEVRLSEEAVNEVSLGSEFGLEVFESVSSVDI 120
Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171
+G++ GKGF G MKR F G +HG S HR GS G R PGR F K MG
Sbjct: 121 SGVSKGKGFQGVMKRFGFRGGPQSHG-SGFHRHAGSIGMRSTPGRCFPGSKRPSHMGTVN 179
Query: 172 VTVKNLEVVSVDDKRGLILVKGCVPGAKK 200
VTVKNLEV+ VD ++ ++LVKG +PG +
Sbjct: 180 VTVKNLEVIKVDLEKKVLLVKGAIPGPRG 208
>gi|322799942|gb|EFZ21068.1| hypothetical protein SINV_02593 [Solenopsis invicta]
Length = 366
Score = 160 bits (406), Expect = 9e-38, Method: Composition-based stats.
Identities = 61/235 (25%), Positives = 112/235 (47%), Gaps = 17/235 (7%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGY--------------M 47
R+G++A+K+G+ ++ G+++ T+L + + +VV + +K
Sbjct: 99 RTGLIAKKIGVYPLWLKNGKKVTSTLLQIVDNEVVKYIPPEKYNPVKSKRPPIQVKKRRG 158
Query: 48 AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107
+ VGA + ++K F+ V PK+ L F + + L G+ ++F G+
Sbjct: 159 CLVVGAENINPQLITKEYYSIFNDTGVMPKRVLRRFVISPEAALQ-PGTPLFATHFKPGE 217
Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167
+VD+ G T+ +GF G MKR F G A+HG + +HR G+ G RV KM G M
Sbjct: 218 VVDIRGKTVDRGFQGVMKRWGFHGQPASHGQTKTHRRPGNIGSGGTKARVMPGTKMPGHM 277
Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCKGKVS 221
G ++ + ++ ++ K +I V G +PG N ++ + D+ K K +
Sbjct: 278 GNRWRILRGVRILRINTKYNVIWVLGHNLPGETNN-YVYMYDTLLPLRQFKTKPN 331
>gi|62184737|ref|YP_219522.1| 50S ribosomal protein L3 [Chlamydophila abortus S26/3]
gi|81313080|sp|Q5L720|RL3_CHLAB RecName: Full=50S ribosomal protein L3
gi|62147804|emb|CAH63550.1| putative 50s ribosomal protein [Chlamydophila abortus S26/3]
Length = 221
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 71/203 (34%), Positives = 108/203 (53%), Gaps = 8/203 (3%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK----- 59
++ +K GM V++ +G + +V+ + + V + +GY A+Q+GA E V
Sbjct: 7 LMGKKEGMIHVFDKDGNLVACSVISMSSNVVTQIKVDSTDGYNAIQMGANEINVPEKTLH 66
Query: 60 -NVSKPMRGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
V+KP G F ++L E R+ ++ + + +GS F F +DV+G++ G
Sbjct: 67 KRVNKPSIGHFKKSGSRVFRELKEVRLSEEAVNEVSLGSEFGLEVFESVSSIDVSGVSKG 126
Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
KGF G MKR F G +HG S HR GS G R PGR F K MG VTVKNL
Sbjct: 127 KGFQGVMKRFGFRGGPQSHG-SGFHRHAGSIGMRSTPGRCFPGSKRPSHMGTVNVTVKNL 185
Query: 178 EVVSVDDKRGLILVKGCVPGAKK 200
EV+ +D ++ ++LVKG +PG +
Sbjct: 186 EVIKIDLEKKVLLVKGAIPGPRG 208
>gi|332028651|gb|EGI68685.1| 39S ribosomal protein L3, mitochondrial [Acromyrmex echinatior]
Length = 271
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 61/223 (27%), Positives = 115/223 (51%), Gaps = 17/223 (7%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK--------------NGYM 47
R+G++A+K+G+ ++ G+++ T+L + + ++V + +K N
Sbjct: 3 RTGLIAKKIGVYPLWLKNGKKVNSTLLQVVDNEIVKYIPPEKFFPVKSKKPAIQIKNRRG 62
Query: 48 AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107
+ VGA + ++K F+ V+PK+ L F V + L G+ ++F G+
Sbjct: 63 CLVVGAENIDPQLITKEYYNIFNDTGVTPKRVLRRFIVSPEAALQ-PGTPLFATHFKPGE 121
Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167
+VD+ G TI +GF G MKR F G+ A+HGV+ +HR G+ G + RV KM G M
Sbjct: 122 IVDIRGKTIDRGFQGVMKRWGFKGMPASHGVTKTHRRPGNIGSGGEKSRVMPGTKMPGHM 181
Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDS 209
G ++ + ++ ++ K +I + G +PG + N++ + D+
Sbjct: 182 GNRWRIIRGVRILRINTKYNVIWILGHNIPG-EINTYCYIYDT 223
>gi|114589227|ref|XP_001147526.1| PREDICTED: hypothetical protein isoform 1 [Pan troglodytes]
Length = 315
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 71/218 (32%), Positives = 102/218 (46%), Gaps = 34/218 (15%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++A KLGM ++ +G++ VT+L
Sbjct: 96 RVGLIALKLGMMPLWTKDGQKHVVTLLQ-------------------------------K 124
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+ + F+ + + PK+ + F + D+ + G+ ++F GQ VDVT TIGKGF
Sbjct: 125 ATSILEFYRELGLPPKQTVKIFNIT-DNAAIKPGTPLYAAHFRPGQYVDVTAKTIGKGFQ 183
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR F G ATHG + +HR G+ D GRV+ KM G+MG T L+V
Sbjct: 184 GVMKRWGFKGQPATHGQTKTHRRPGAVAT-GDIGRVWPGTKMPGKMGNIYRTEYGLKVWR 242
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
++ K +I V G VPG KN + VRDS A GK
Sbjct: 243 INTKHNIIYVNGSVPG-HKNCLVKVRDSKLPAYKDLGK 279
>gi|12045004|ref|NP_072814.1| 50S ribosomal protein L3 [Mycoplasma genitalium G37]
gi|1350743|sp|P47397|RL3_MYCGE RecName: Full=50S ribosomal protein L3
gi|3844745|gb|AAC71369.1| ribosomal protein L3 [Mycoplasma genitalium G37]
gi|166078974|gb|ABY79592.1| ribosomal protein L3 [synthetic Mycoplasma genitalium JCVI-1.0]
Length = 257
Score = 158 bits (400), Expect = 5e-37, Method: Composition-based stats.
Identities = 70/218 (32%), Positives = 114/218 (52%), Gaps = 6/218 (2%)
Query: 4 GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
G+ K+GM+ ++ + +P+T+++ + QV +T+ K+ Y A + K ++K
Sbjct: 5 GIFGVKVGMSQIFTEQNECLPITIVYCEANQVAGIKTIAKDNYNATLLSFQTVDEKQLNK 64
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
P +GFFS + + P K L E R + +L + F +G+ VDVT +T G+GF+GA
Sbjct: 65 PKQGFFSKLKLEPHKYLREIRKMQGFELGKKITPQ--ELFKIGEYVDVTSLTKGRGFTGA 122
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQD---PGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+KR NF HG HR GS + RVFK KKM+G G +VT++NL +V
Sbjct: 123 IKRWNFKIGPLGHGAGYPHRFQGSVQAGRGGSSAQRVFKGKKMSGHYGHEQVTIQNLFIV 182
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
D+ L+LV G + G + +L++ + K K
Sbjct: 183 GFDEINKLVLVSGAIAGPE-GGIVLIKTAKKKTGKIKD 219
>gi|308487608|ref|XP_003105999.1| hypothetical protein CRE_20298 [Caenorhabditis remanei]
gi|308254573|gb|EFO98525.1| hypothetical protein CRE_20298 [Caenorhabditis remanei]
Length = 403
Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats.
Identities = 75/220 (34%), Positives = 101/220 (45%), Gaps = 19/220 (8%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH---------------RTLDKNGY 46
R G+V RK+GM + +G RI TVL +D VV + +++G
Sbjct: 102 RVGLVVRKIGMLPQWTNDGNRILCTVLEVDENHVVSVTSPDSWYKASAVGKRKAFNRHGP 161
Query: 47 MAV-QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTV 105
M VGAG + R F+ V K+KL F V + D L G +F V
Sbjct: 162 MWRVTVGAGNDDPTKYTLAYRRQFARAGVPTKEKLGCFLVTE-DALPHAGQPLDARHFAV 220
Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165
GQ V TG TI GF G M R G T + SHR GS G D R++ K+M G
Sbjct: 221 GQHVTATGKTIDWGFQGGMHRWGMRGQP-TRRTTKSHRRIGSVGSVGDA-RIWPGKRMPG 278
Query: 166 RMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWIL 205
MG TV LE+V +++ + +I VKG VPG + +L
Sbjct: 279 HMGYEWRTVSGLEIVRINNDKQVIYVKGSVPGDIGETLLL 318
>gi|42520530|ref|NP_966445.1| 50S ribosomal protein L3 [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|42410269|gb|AAS14379.1| ribosomal protein L3 [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 240
Score = 158 bits (399), Expect = 7e-37, Method: Composition-based stats.
Identities = 96/215 (44%), Positives = 142/215 (66%), Gaps = 6/215 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ +G T +Y+ R+ VT+LHL ++ + DK GY +V +G G+ K +
Sbjct: 9 RIGLLMMNIGHTAMYSDN-SRMAVTLLHLSETHIIDIKGQDKCGYNSVILGTGDFKN--I 65
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP + ++ K KL+E R+ D + G ++F VGQ +D+TG +IGKGF+
Sbjct: 66 AKPQLEYLKKKGINNKCKLYESRL-NDLSGIECGKKVGINHFVVGQYLDITGYSIGKGFA 124
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRHNF GLRA+HGVSI+HRS GSTG QDPGRVFK KKMAG +G +R+T +N++++S
Sbjct: 125 GVMKRHNFSGLRASHGVSIAHRSQGSTGQCQDPGRVFKGKKMAGHLGNSRITAQNMKILS 184
Query: 182 VDDKRGLILVKGC-VPGAKKNSWILVRDSFKSAVN 215
+D + +I VKG VPG KNS++ VRD+ K +++
Sbjct: 185 IDHENSIIAVKGNNVPGF-KNSYVFVRDAVKKSLH 218
>gi|286142684|gb|ADC41372.1| ribosomal protein L3 [Streptomyces californicus]
gi|286142700|gb|ADC41380.1| ribosomal protein L3 [Streptomyces vinaceus]
gi|286142714|gb|ADC41387.1| ribosomal protein L3 [Streptomyces floridae]
gi|286142746|gb|ADC41403.1| ribosomal protein L3 [Streptomyces sp. CB157]
gi|286142798|gb|ADC41429.1| ribosomal protein L3 [Streptomyces puniceus]
Length = 167
Score = 157 bits (398), Expect = 8e-37, Method: Composition-based stats.
Identities = 75/168 (44%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
T V++ R +PVTV+ C V RT D +GY AVQ+ GE + V+KP++G F+
Sbjct: 1 TQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYEAVQIAFGEIDPRKVNKPLKGHFAKA 60
Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
+V+P++ L E R D +G + + F G VDVTG + GKGF+G MKRHNF G
Sbjct: 61 DVTPRRHLVELR-TPDASEYTLGQEVTAAVFESGVKVDVTGKSKGKGFAGVMKRHNFKGG 119
Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+A+HG HR GS G PGRVFK +MAGRMG RVT +NL +
Sbjct: 120 KASHGAHRVHRMPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIH 167
>gi|190571546|ref|YP_001975904.1| ribosomal protein L3 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|190357818|emb|CAQ55274.1| ribosomal protein L3 [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
Length = 240
Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats.
Identities = 96/215 (44%), Positives = 140/215 (65%), Gaps = 6/215 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ +G T +Y R+ VT+LHL ++ + DK GY +V +G G+ K +
Sbjct: 9 RIGLLMTNVGHTAMYFDN-SRMAVTLLHLSETYIIDIKGQDKCGYNSVILGTGDLKK--I 65
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP + ++ K KL+E R+ + G ++F VGQ +D+TG ++GKGF+
Sbjct: 66 AKPQLEYLKKKGINSKCKLYESRLTDLFG-IECGKKVGVNHFVVGQYLDITGYSLGKGFA 124
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRHNF GLRA+HGVSI+HRS GSTG QDPGRVFK KKMAG +G +RVTV+N++++S
Sbjct: 125 GVMKRHNFSGLRASHGVSIAHRSQGSTGQCQDPGRVFKGKKMAGHLGNSRVTVQNMKILS 184
Query: 182 VDDKRGLILVKGC-VPGAKKNSWILVRDSFKSAVN 215
+D + +I VKG VPG KNS++ VRD+ K ++
Sbjct: 185 IDYENSIIAVKGNNVPGF-KNSYVFVRDAVKKPLH 218
>gi|42409125|dbj|BAD10375.1| putative 50S ribosomal protein L3 [Oryza sativa Japonica Group]
gi|42409256|dbj|BAD10519.1| putative 50S ribosomal protein L3 [Oryza sativa Japonica Group]
Length = 215
Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats.
Identities = 77/208 (37%), Positives = 114/208 (54%), Gaps = 5/208 (2%)
Query: 6 VARKLGMTCVYNI-EGRRIPVTVLHL--DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
+A K+GM ++ G+ +PVTV+ V +T +GY AVQVG + + ++
Sbjct: 1 MATKVGMMTYFDPATGKPVPVTVVGFREGGNVVTQVKTAATDGYDAVQVGYHGVREEKLT 60
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
+P G P + L EFR+Q D P + F G LVD++G +IGKGF G
Sbjct: 61 RPELGHLGKAGAPPLRHLQEFRLQSVDGYDPGQPLDFADMFKEGDLVDISGKSIGKGFQG 120
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+KRHNF THG S SHR+ GS G PGRV+K KKM GRMGG + ++ L++V +
Sbjct: 121 GIKRHNFKRGLMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKI 179
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSF 210
D+ ++++KG VPG N + + +
Sbjct: 180 DNDLKVVMIKGAVPGKPGN-LLRIAPAK 206
>gi|286142694|gb|ADC41377.1| ribosomal protein L3 [Streptomyces griseobrunneus]
gi|286142698|gb|ADC41379.1| ribosomal protein L3 [Streptomyces bacillaris]
gi|286142710|gb|ADC41385.1| ribosomal protein L3 [Kitasatospora mediocidica]
gi|286142716|gb|ADC41388.1| ribosomal protein L3 [Streptomyces roseochromogenes]
Length = 167
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 77/168 (45%), Positives = 99/168 (58%), Gaps = 1/168 (0%)
Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
T V++ R +PVTV+ C V RT D +GY AVQ+ GE + V+KP++G F+
Sbjct: 1 TQVWDENNRVVPVTVVKAGPCVVTQVRTNDNDGYEAVQIAFGEIDPRKVNKPLKGHFAKA 60
Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
+V+P++ L E R D +G + F G VDVTG + GKGF+G MKRHNF GL
Sbjct: 61 DVTPRRHLVELR-TPDASEYTLGQEVTADVFESGVKVDVTGKSKGKGFAGVMKRHNFKGL 119
Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
A HG HRS GS G PGRVFK +MAGRMG RVT +NL +
Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIH 167
>gi|225629696|ref|ZP_03787668.1| ribosomal protein L3 [Wolbachia endosymbiont of Muscidifurax
uniraptor]
gi|225630301|ref|YP_002727092.1| ribosomal protein L3 [Wolbachia sp. wRi]
gi|225591449|gb|EEH12517.1| ribosomal protein L3 [Wolbachia endosymbiont of Muscidifurax
uniraptor]
gi|225592282|gb|ACN95301.1| ribosomal protein L3 [Wolbachia sp. wRi]
Length = 240
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 96/215 (44%), Positives = 142/215 (66%), Gaps = 6/215 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ +G T +Y+ R+ VT+LHL ++ + DK GY +V +G G+ K +
Sbjct: 9 RIGLLMMNIGHTAMYSDN-SRMAVTLLHLSETYIIDIKGQDKCGYNSVILGTGDFKN--I 65
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP + ++ K KL+E R+ D + G ++F VGQ +D+TG +IGKGF+
Sbjct: 66 AKPQLEYLKKKGINNKCKLYESRL-NDLSGIECGKKVGINHFVVGQYLDITGYSIGKGFA 124
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRHNF GLRA+HGVSI+HRS GSTG QDPGRVFK KKMAG +G +R+T +N++++S
Sbjct: 125 GVMKRHNFSGLRASHGVSIAHRSQGSTGQCQDPGRVFKGKKMAGHLGNSRITAQNMKILS 184
Query: 182 VDDKRGLILVKGC-VPGAKKNSWILVRDSFKSAVN 215
+D + +I VKG VPG KNS++ VRD+ K +++
Sbjct: 185 IDHENSIIAVKGNNVPGF-KNSYVFVRDAVKKSLH 218
>gi|286142754|gb|ADC41407.1| ribosomal protein L3 [Streptomyces sp. CB169]
gi|286142756|gb|ADC41408.1| ribosomal protein L3 [Streptomyces sp. CB170]
Length = 167
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 77/168 (45%), Positives = 101/168 (60%), Gaps = 1/168 (0%)
Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
T V++ R +PVTV+ C V RT D +GY +VQ+ GE + V+KP++G F+
Sbjct: 1 TQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60
Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
+V+P++ L E R D +G + F G VDVTG + GKGF+G MKRHNFGGL
Sbjct: 61 DVTPRRHLVEIRTS-DASEYTLGQELTAETFESGVKVDVTGKSKGKGFAGVMKRHNFGGL 119
Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
++HG HRS GS G PGRVFK +MAGRMG RVT +NL V
Sbjct: 120 GSSHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVH 167
>gi|286142602|gb|ADC41331.1| ribosomal protein L3 [Streptomyces griseus]
gi|286142606|gb|ADC41333.1| ribosomal protein L3 [Streptomyces griseus]
gi|286142612|gb|ADC41336.1| ribosomal protein L3 [Streptomyces griseus]
gi|286142614|gb|ADC41337.1| ribosomal protein L3 [Streptomyces griseus]
gi|286142616|gb|ADC41338.1| ribosomal protein L3 [Streptomyces griseus]
gi|286142660|gb|ADC41360.1| ribosomal protein L3 [Streptomyces griseus]
gi|286142662|gb|ADC41361.1| ribosomal protein L3 [Streptomyces griseus]
gi|286142664|gb|ADC41362.1| ribosomal protein L3 [Streptomyces griseus]
gi|286142668|gb|ADC41364.1| ribosomal protein L3 [Streptomyces griseus]
gi|286142672|gb|ADC41366.1| ribosomal protein L3 [Streptomyces griseus]
gi|286142674|gb|ADC41367.1| ribosomal protein L3 [Streptomyces griseus]
gi|286142676|gb|ADC41368.1| ribosomal protein L3 [Streptomyces griseus]
gi|286142678|gb|ADC41369.1| ribosomal protein L3 [Streptomyces griseus]
gi|286142680|gb|ADC41370.1| ribosomal protein L3 [Streptomyces griseus]
gi|286142682|gb|ADC41371.1| ribosomal protein L3 [Streptomyces sp. DSM 40932]
gi|286142688|gb|ADC41374.1| ribosomal protein L3 [Streptomyces anulatus]
gi|286142690|gb|ADC41375.1| ribosomal protein L3 [Streptomyces reticuli]
gi|286142750|gb|ADC41405.1| ribosomal protein L3 [Streptomyces griseus]
gi|286142752|gb|ADC41406.1| ribosomal protein L3 [Streptomyces griseus]
gi|286142762|gb|ADC41411.1| ribosomal protein L3 [Streptomyces griseus]
gi|286142764|gb|ADC41412.1| ribosomal protein L3 [Streptomyces griseus]
gi|286142770|gb|ADC41415.1| ribosomal protein L3 [Streptomyces griseus]
gi|286142772|gb|ADC41416.1| ribosomal protein L3 [Streptomyces griseus]
gi|286142774|gb|ADC41417.1| ribosomal protein L3 [Streptomyces griseus]
gi|286142776|gb|ADC41418.1| ribosomal protein L3 [Streptomyces griseus]
gi|286142778|gb|ADC41419.1| ribosomal protein L3 [Streptomyces griseus]
gi|286142780|gb|ADC41420.1| ribosomal protein L3 [Streptomyces griseus]
gi|286142790|gb|ADC41425.1| ribosomal protein L3 [Streptomyces sp. E1002]
Length = 167
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 77/168 (45%), Positives = 99/168 (58%), Gaps = 1/168 (0%)
Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
T V++ R +PVTV+ C V RT D +GY AVQ+ GE + V+KP++G F+
Sbjct: 1 TQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYEAVQIAFGEIDPRKVNKPLKGHFAKA 60
Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
+V+P++ L E R D +G + F G VDVTG + GKGF+G MKRHNF GL
Sbjct: 61 DVTPRRHLVELR-TPDASEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAGVMKRHNFKGL 119
Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
A HG HRS GS G PGRVFK +MAGRMG RVT +NL +
Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIH 167
>gi|242019299|ref|XP_002430099.1| 50S ribosomal protein L3, putative [Pediculus humanus corporis]
gi|212515180|gb|EEB17361.1| 50S ribosomal protein L3, putative [Pediculus humanus corporis]
Length = 327
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 64/225 (28%), Positives = 107/225 (47%), Gaps = 18/225 (8%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD--------------KNGY- 46
RSG++ K+G+ ++ G+ + T++ + + V+ + K G
Sbjct: 51 RSGLIGIKIGVLPQWHTNGKPLLTTLIQIVDNHVISYIPPKDFIVNKKRLGRRFYKEGKL 110
Query: 47 MAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVG 106
+ VG+ + ++ G F+ V PKK L F + + G+ ++F VG
Sbjct: 111 GCLVVGSVNCDPQMFTREYNGLFAKAGVMPKKLLTRFPIHPCAA-IQPGTPLYAAHFKVG 169
Query: 107 QLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGR 166
VD+TG TI +GF G MKR + G+ A+HGV+ +HR G+ G + RVF KM G
Sbjct: 170 DYVDITGKTIYRGFQGVMKRWGYKGMPASHGVTKTHRRPGNIGSGGEKARVFPGTKMPGV 229
Query: 167 MGGNRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSF 210
G T + L + +D K ++ V G +PG NS++ V D+
Sbjct: 230 QGNKMRTTRGLTIWKIDHKYNVLYVSGDNIPG-DVNSFVYVHDTV 273
>gi|167974870|ref|ZP_02557147.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 11 str. ATCC
33695]
gi|188997728|gb|EDU66825.1| ribosomal protein L3 [Ureaplasma urealyticum serovar 11 str. ATCC
33695]
Length = 214
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 71/194 (36%), Positives = 104/194 (53%), Gaps = 8/194 (4%)
Query: 21 RRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKL 80
+ + TV++++ +V+ +T +K+GY A+Q+G K K ++KP+ G F N PK+ +
Sbjct: 1 KAVAATVIYVEPNKVLAVKTNEKDGYNAIQIGYETVKEKALNKPLLGQFKKANSDPKRHI 60
Query: 81 FEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSI 140
EFR + VG+ + S F GQLV+ T G GF+G++KRHNF HG
Sbjct: 61 KEFRDVVAE----VGAELTVSEFEPGQLVNAQAYTKGHGFTGSIKRHNFSMGPMGHGAGY 116
Query: 141 SHRSHGST---GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPG 197
HR GS RVFK K+ G G VT KNL V+ V LIL+KG +PG
Sbjct: 117 PHRYVGSIAKGRGGSQAQRVFKGTKLPGHYGHELVTTKNLLVLDVKANENLILIKGAIPG 176
Query: 198 AKKNSWILVRDSFK 211
K S +L++ + K
Sbjct: 177 P-KGSIVLLKSAKK 189
>gi|286142802|gb|ADC41431.1| ribosomal protein L3 [Streptomyces mashuensis]
Length = 167
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 77/168 (45%), Positives = 99/168 (58%), Gaps = 1/168 (0%)
Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
T V++ R +PVTV+ C V RT D +GY +VQ+ GE + V+KP++G F+
Sbjct: 1 TQVWDENNRVVPVTVVKAGPCIVTQVRTNDTDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60
Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
+V+P++ L E R D +G + F G VDVTG + GKGF+G MKRHNF GL
Sbjct: 61 DVTPRRHLVEIR-TADASEYTLGQELTAEVFEAGVKVDVTGKSKGKGFAGVMKRHNFRGL 119
Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
A HG HRS GS G PGRVFK +MAGRMG RVT +NL V
Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVH 167
>gi|286142696|gb|ADC41378.1| ribosomal protein L3 [Streptomyces microflavus]
gi|286142702|gb|ADC41381.1| ribosomal protein L3 [Streptomyces microflavus]
gi|286142704|gb|ADC41382.1| ribosomal protein L3 [Streptomyces alboviridis]
gi|286142706|gb|ADC41383.1| ribosomal protein L3 [Streptomyces microflavus]
gi|286142712|gb|ADC41386.1| ribosomal protein L3 [Streptomyces albidus]
Length = 167
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 78/168 (46%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
T V++ R +PVTV+ C V RT D +GY AVQ+ GE + V+KP++G F+
Sbjct: 1 TQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYEAVQIAFGEIDPRKVNKPLKGHFAKA 60
Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
+V+P++ L E R D +G + F G VDVTG + GKGF+G MKRHNF GL
Sbjct: 61 DVTPRRHLVELR-TPDASEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAGVMKRHNFKGL 119
Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
A HGV HRS GS G PGRVFK +MAGRMG RVT +NL +
Sbjct: 120 GAGHGVQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIH 167
>gi|307103242|gb|EFN51504.1| hypothetical protein CHLNCDRAFT_48352 [Chlorella variabilis]
Length = 215
Score = 156 bits (394), Expect = 3e-36, Method: Composition-based stats.
Identities = 81/214 (37%), Positives = 104/214 (48%), Gaps = 5/214 (2%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
GV K GM + +G +P TV+ L V +T +K+GY AVQVG + +
Sbjct: 5 VGVWGTKAGMMQFF-KDGASLPATVIALEGGNIVTHVKTAEKDGYTAVQVGYKTCREDKI 63
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G K L EF+V+ + F G +VDV G TIGKGF
Sbjct: 64 TKPELGHLQKAGAPAMKHLREFKVKDASGYEAGQQLNLVDMFKAGDMVDVAGTTIGKGFQ 123
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR F THG S S R HGSTG PGRVF K AG+MG R +K EV+
Sbjct: 124 GGIKRWGFARGNMTHG-SKSKREHGSTGPGSSPGRVFPGLKAAGQMGNVRRKLK-AEVLL 181
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
VD + I+VKG VPG N + + + VN
Sbjct: 182 VDAENSAIVVKGSVPGKPGN-VVEIAPAKVVGVN 214
>gi|58584599|ref|YP_198172.1| 50S ribosomal protein L3 [Wolbachia endosymbiont strain TRS of
Brugia malayi]
gi|58418915|gb|AAW70930.1| Ribosomal protein L3 [Wolbachia endosymbiont strain TRS of Brugia
malayi]
Length = 241
Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 98/215 (45%), Positives = 140/215 (65%), Gaps = 6/215 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ +G T +Y+ R+ VT+LHL +V R DK GY +V +G G K +
Sbjct: 9 RIGLLMTNIGHTAIYS-NNSRVAVTLLHLSETYIVDVRRQDKCGYNSVILGIGNFKN--I 65
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP + + +S + KL+E R+ D + G ++F VGQ +D+T +IGKGF+
Sbjct: 66 AKPQLEYLKKMGISNRCKLYESRLS-DLSGIECGKKVGVNHFVVGQYLDITSYSIGKGFA 124
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKRHNF GLRA+HGVSI+HRS GSTG QDPGRVFK K+MAG +G +RVTV+N+E++S
Sbjct: 125 GVMKRHNFCGLRASHGVSIAHRSQGSTGQCQDPGRVFKGKRMAGHLGSSRVTVQNMEILS 184
Query: 182 VDDKRGLILVKGC-VPGAKKNSWILVRDSFKSAVN 215
+D I+VKG VPG KNS++ V+D+ K ++
Sbjct: 185 IDHGNSTIVVKGNNVPGF-KNSYVFVKDAIKKPLH 218
>gi|286142594|gb|ADC41327.1| ribosomal protein L3 [Streptomyces platensis]
Length = 167
Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 74/168 (44%), Positives = 99/168 (58%), Gaps = 1/168 (0%)
Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
T V++ R +PVTV+ C V RT D++GY +VQ+ GE + V+KP++G F+
Sbjct: 1 TQVWDENNRVVPVTVVKAGPCVVTQVRTNDQDGYDSVQIAFGEIDPRKVNKPLKGHFAKA 60
Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
+V+P++ L E R D +G + F G VDVTG + GKGF+G MKRH F G
Sbjct: 61 DVTPRRHLVEVR-TADAGEYTLGQELTAETFESGVKVDVTGKSKGKGFAGVMKRHGFHGG 119
Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+A+HG HR GS G PGRVFK +MAGRMG RVT +NL V
Sbjct: 120 KASHGAHRVHRKPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTVH 167
>gi|286142608|gb|ADC41334.1| ribosomal protein L3 [Streptomyces platensis]
Length = 167
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 74/168 (44%), Positives = 99/168 (58%), Gaps = 1/168 (0%)
Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
T V++ R +PVTV+ C V RT D++GY +VQ+ GE + V+KP++G F+
Sbjct: 1 TQVWDENNRVVPVTVVKAGPCVVTQVRTNDQDGYDSVQIAFGEIDPRKVNKPLKGHFAKA 60
Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
+V+P++ L E R D +G + F G VDVTG + GKGF+G MKRH F G
Sbjct: 61 DVTPRRHLVEVRTT-DAGEYTLGQELTAETFESGVKVDVTGKSKGKGFAGVMKRHGFHGG 119
Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+A+HG HR GS G PGRVFK +MAGRMG RVT +NL V
Sbjct: 120 KASHGAHRVHRKPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTVH 167
>gi|286142600|gb|ADC41330.1| ribosomal protein L3 [Streptomyces griseus]
gi|286142604|gb|ADC41332.1| ribosomal protein L3 [Streptomyces griseus]
gi|286142610|gb|ADC41335.1| ribosomal protein L3 [Streptomyces griseus]
gi|286142666|gb|ADC41363.1| ribosomal protein L3 [Streptomyces griseus]
gi|286142670|gb|ADC41365.1| ribosomal protein L3 [Streptomyces griseus]
gi|286142708|gb|ADC41384.1| ribosomal protein L3 [Streptomyces albovinaceus]
gi|286142720|gb|ADC41390.1| ribosomal protein L3 [Streptomyces griseus]
gi|286142726|gb|ADC41393.1| ribosomal protein L3 [Streptomyces griseus]
gi|286142730|gb|ADC41395.1| ribosomal protein L3 [Streptomyces griseus]
gi|286142742|gb|ADC41401.1| ribosomal protein L3 [Streptomyces griseus]
gi|286142744|gb|ADC41402.1| ribosomal protein L3 [Streptomyces griseus]
gi|286142748|gb|ADC41404.1| ribosomal protein L3 [Streptomyces griseus]
gi|286142760|gb|ADC41410.1| ribosomal protein L3 [Streptomyces griseus]
gi|286142784|gb|ADC41422.1| ribosomal protein L3 [Streptomyces griseus]
Length = 167
Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats.
Identities = 77/168 (45%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
T V++ R +PVTV+ C V RT D +GY AVQ+ GE + V+KP++G F+
Sbjct: 1 TQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYEAVQIAFGEIDPRKVNKPLKGHFAKA 60
Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
+V+P++ L E R D +G + + F G VDVTG + GKGF+G MKRHNF GL
Sbjct: 61 DVTPRRHLVELR-TPDASEYTLGQEVTAAVFESGVKVDVTGKSKGKGFAGVMKRHNFKGL 119
Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
A HG HRS GS G PGRVFK +MAGRMG RVT +NL +
Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIH 167
>gi|286142686|gb|ADC41373.1| ribosomal protein L3 [Streptomyces olivoviridis]
Length = 167
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 77/168 (45%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
T V++ R +PVTV+ C V RT D +GY +VQ+ GE + V+KP++G F+
Sbjct: 1 TQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60
Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
+V+P++ L E R D +G + F G VDVTG + GKGF+G MKRHNF GL
Sbjct: 61 DVTPRRHLVELR-TPDASEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAGVMKRHNFKGL 119
Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
A HGV HRS GS G PGRVFK +MAGRMG RVT +NL +
Sbjct: 120 GAGHGVQRKHRSPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTIH 167
>gi|145628334|ref|ZP_01784135.1| 50S ribosomal protein L3 [Haemophilus influenzae 22.1-21]
gi|145640870|ref|ZP_01796452.1| 50S ribosomal protein L3 [Haemophilus influenzae R3021]
gi|144980109|gb|EDJ89768.1| 50S ribosomal protein L3 [Haemophilus influenzae 22.1-21]
gi|145274384|gb|EDK14248.1| 50S ribosomal protein L3 [Haemophilus influenzae 22.4-21]
Length = 163
Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats.
Identities = 70/161 (43%), Positives = 95/161 (59%), Gaps = 2/161 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V RK+GMT ++N +G +PVTV+ ++ +V +TL+ +GY AVQV G K V
Sbjct: 1 MIGLVGRKVGMTRIFNEDGVSVPVTVIEIEANRVTQVKTLENDGYTAVQVTTGSKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F V + L+EFR + ++ +G + F + VDVTG + GKGF
Sbjct: 61 TKPEAGHFVKAGVEAGRGLWEFRTEGEE--FTLGQEINVDIFADVKKVDVTGTSKGKGFQ 118
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
G +KR NF ATHG S+SHR GS G Q PGRVFK KK
Sbjct: 119 GGVKRWNFRTQDATHGNSLSHRVLGSIGQNQTPGRVFKGKK 159
>gi|194767737|ref|XP_001965971.1| GF11271 [Drosophila ananassae]
gi|190619814|gb|EDV35338.1| GF11271 [Drosophila ananassae]
Length = 354
Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 71/229 (31%), Positives = 110/229 (48%), Gaps = 15/229 (6%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDK------------NGYMAV 49
R G +ARK+G ++ G +I T+L + + ++ + +K N + +
Sbjct: 91 RCGTIARKIGEYPLWLNNGEKIRTTLLQIIDNHIISYIPPEKYSPAHYPNVKNVNKFGCL 150
Query: 50 QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109
VGAG ++K G F V PKK L F V + L G+ + +++ VG+ V
Sbjct: 151 LVGAGTINPTWLTKEYCGIFHESRVMPKKMLARFLVSPEAA-LHPGTALNVAHYRVGEFV 209
Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169
DV G TI GF G +KR F G+ A+HGV+ +HR G+ G + GRV+ KM GRMG
Sbjct: 210 DVRGKTIDYGFQGVVKRFGFKGMPASHGVTKTHRRVGNIGGGGEKGRVWPGTKMPGRMGS 269
Query: 170 NRVTVKNLEVVSVDDKRGLILVKGC-VPGAKKNSWILVRDSFKSAVNCK 217
K L+V+ K ++ V+G VPG + + D+ K
Sbjct: 270 RWRINKGLQVLRTYLKYNVMWVQGSAVPGP-TGGIVYLYDTILPHRKKK 317
>gi|286142796|gb|ADC41428.1| ribosomal protein L3 [Streptomyces netropsis]
Length = 167
Score = 154 bits (390), Expect = 7e-36, Method: Composition-based stats.
Identities = 77/168 (45%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
T V++ R +PVTV+ C V RT D +GY +VQ+ GE + V+KP++G F+
Sbjct: 1 TQVWDENNRVVPVTVVKAGPCVVTQVRTNDSDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60
Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
+V+P++ L E R D +G + + F G VDVTG + GKGF+G MKRHNF GL
Sbjct: 61 DVTPRRHLVELR-TADASEYTLGQEITAAVFESGVKVDVTGKSKGKGFAGVMKRHNFKGL 119
Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
A HG HRS GS G PGRVFK +MAGRMG RVT +NL V
Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVH 167
>gi|286142658|gb|ADC41359.1| ribosomal protein L3 [Streptomyces humidus]
Length = 167
Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats.
Identities = 76/168 (45%), Positives = 98/168 (58%), Gaps = 1/168 (0%)
Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
T V++ R +PVTV+ V RT D +GY +VQ+ GE + V+KP++G F+
Sbjct: 1 TQVWDENNRVVPVTVVKAGPNVVTQVRTNDSDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60
Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
+V+P++ L E R D +G + F G VDVTG + GKGF+G MKRHNF GL
Sbjct: 61 DVTPRRHLVEIR-TADAAEYTLGQEITAEVFEAGVKVDVTGKSKGKGFAGVMKRHNFKGL 119
Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
A HG HRS GS G PGRVFK +MAGRMG RVT +NL V
Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVH 167
>gi|286142656|gb|ADC41358.1| ribosomal protein L3 [Streptomyces glaucescens]
Length = 167
Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats.
Identities = 75/168 (44%), Positives = 98/168 (58%), Gaps = 1/168 (0%)
Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
T V++ R +PVTV+ V RT D +GY +VQ+ G+ + V+KP++G F+
Sbjct: 1 TQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGDIDPRKVNKPLKGHFAKA 60
Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
+V+P++ L E R D +G + F G VDVTG + GKGF+G MKRHNF GL
Sbjct: 61 DVTPRRHLVEIRTS-DASEYTLGQEITAEVFEAGVKVDVTGKSKGKGFAGVMKRHNFRGL 119
Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
A HG HRS GS G PGRVFK +MAGRMG RVT +NL V
Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVH 167
>gi|286142620|gb|ADC41340.1| ribosomal protein L3 [Streptomyces griseoruber]
Length = 167
Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 76/168 (45%), Positives = 98/168 (58%), Gaps = 1/168 (0%)
Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
T V++ R +PVTV+ V RT D +GY +VQ+ GE + V+KP++G F+
Sbjct: 1 TQVWDENNRVVPVTVVKAGPNVVTQVRTNDADGYESVQIAFGEIDPRKVNKPLKGHFAKA 60
Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
+V+P++ L E R D +G + F G VDVTG + GKGF+G MKRHNF GL
Sbjct: 61 DVTPRRHLVEIR-TADASEYTLGQEITAEVFEAGIKVDVTGKSKGKGFAGVMKRHNFKGL 119
Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
A HG HRS GS G PGRVFK +MAGRMG RVT +NL V
Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVH 167
>gi|115534155|ref|NP_498045.2| hypothetical protein C26E6.6 [Caenorhabditis elegans]
gi|94730420|sp|P49404|RM03_CAEEL RecName: Full=Putative 39S ribosomal protein L3, mitochondrial
gi|83921825|gb|AAA21160.3| Hypothetical protein C26E6.6 [Caenorhabditis elegans]
Length = 403
Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 77/223 (34%), Positives = 101/223 (45%), Gaps = 20/223 (8%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD---------------KNGY 46
R G+V RK+GM + EG RI TVL +D VV + + ++G
Sbjct: 102 RVGLVVRKIGMLPQWTNEGNRILCTVLEVDENHVVSITSPEAWYKSSAVGKRKAFNRHGP 161
Query: 47 MAV-QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTV 105
M VGAG + R F + K+KL F V + D L G +F V
Sbjct: 162 MWRVTVGAGNDDPTKYTLGYRRQFVRAGIPVKEKLGCFLVTE-DALPSAGQPLDARHFGV 220
Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165
GQ V TG TI GF G M R G T + SHR GS G D R++ K+M G
Sbjct: 221 GQYVTATGKTIDWGFQGGMHRWGMRGQP-TRRTTKSHRRIGSVGSVGDA-RIWPGKRMPG 278
Query: 166 RMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRD 208
MG TV LE+V ++ + +I VKG VPG IL++D
Sbjct: 279 HMGYEWRTVSGLEIVRINVDKQVIYVKGSVPG-DIGETILLKD 320
>gi|286142804|gb|ADC41432.1| ribosomal protein L3 [Streptomyces galbus]
Length = 167
Score = 153 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 76/168 (45%), Positives = 98/168 (58%), Gaps = 1/168 (0%)
Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
T V++ R +PVTV+ V RT D +GY +VQ+ GE + V+KP++G F+
Sbjct: 1 TQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60
Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
+V+P++ L E R D +G + F G VDVTG + GKGF+G MKRHNF GL
Sbjct: 61 DVTPRRHLVEIR-TADASEYTLGQEITAEVFEAGIKVDVTGKSKGKGFAGVMKRHNFKGL 119
Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
A HG HRS GS G PGRVFK +MAGRMG RVT +NL V
Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVH 167
>gi|88607449|ref|YP_504892.1| 50S ribosomal protein L3 [Anaplasma phagocytophilum HZ]
gi|88598512|gb|ABD43982.1| ribosomal protein L3 [Anaplasma phagocytophilum HZ]
Length = 220
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 104/215 (48%), Positives = 141/215 (65%), Gaps = 7/215 (3%)
Query: 8 RKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+K+G T +++ G R+PVT+L L++ VV + +GY AV + G + V+KP
Sbjct: 4 KKVGSTAMFDATTGSRVPVTLLLLEDTFVVGTKVSGIHGYDAVVL--GTKRRGVVNKPQV 61
Query: 67 GFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKR 126
+ + KLFE RV+ DL P S+F GQ VDVTG TIG+GF+G MKR
Sbjct: 62 QALRKLGIEEDYKLFESRVKAVGDLQPGSK-VEVSHFFKGQFVDVTGYTIGRGFAGVMKR 120
Query: 127 HNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKR 186
HNF GLRA+HGVSISHRS GSTG QDPGRVFK KKMAG MG ++VT++NL+V+ VD+K
Sbjct: 121 HNFRGLRASHGVSISHRSQGSTGQCQDPGRVFKGKKMAGHMGDSKVTMQNLQVMLVDEKE 180
Query: 187 GLILVKGC-VPGAKKNSWILVRDSFKSAVNCKGKV 220
L++V+G +PGA+ S++ VRD+ K V KG+
Sbjct: 181 SLLVVRGTGIPGAE-GSYVFVRDAIKKPVP-KGEA 213
>gi|286142596|gb|ADC41328.1| ribosomal protein L3 [Streptomyces limosus]
gi|286142598|gb|ADC41329.1| ribosomal protein L3 [Streptomyces limosus]
gi|286142718|gb|ADC41389.1| ribosomal protein L3 [Streptomyces limosus]
gi|286142722|gb|ADC41391.1| ribosomal protein L3 [Streptomyces limosus]
gi|286142724|gb|ADC41392.1| ribosomal protein L3 [Streptomyces limosus]
gi|286142728|gb|ADC41394.1| ribosomal protein L3 [Streptomyces limosus]
gi|286142732|gb|ADC41396.1| ribosomal protein L3 [Streptomyces limosus]
gi|286142734|gb|ADC41397.1| ribosomal protein L3 [Streptomyces limosus]
gi|286142736|gb|ADC41398.1| ribosomal protein L3 [Streptomyces limosus]
gi|286142738|gb|ADC41399.1| ribosomal protein L3 [Streptomyces limosus]
gi|286142740|gb|ADC41400.1| ribosomal protein L3 [Streptomyces limosus]
gi|286142758|gb|ADC41409.1| ribosomal protein L3 [Streptomyces limosus]
gi|286142766|gb|ADC41413.1| ribosomal protein L3 [Streptomyces limosus]
gi|286142768|gb|ADC41414.1| ribosomal protein L3 [Streptomyces limosus]
gi|286142782|gb|ADC41421.1| ribosomal protein L3 [Streptomyces griseus]
gi|286142786|gb|ADC41423.1| ribosomal protein L3 [Streptomyces limosus]
gi|286142788|gb|ADC41424.1| ribosomal protein L3 [Streptomyces limosus]
gi|286142792|gb|ADC41426.1| ribosomal protein L3 [Streptomyces limosus]
gi|286142794|gb|ADC41427.1| ribosomal protein L3 [Streptomyces griseus]
Length = 167
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 77/168 (45%), Positives = 98/168 (58%), Gaps = 1/168 (0%)
Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
T V++ R +PVTV+ V RT D +GY AVQ+ GE + V+KP++G F+
Sbjct: 1 TQVWDENNRVVPVTVVKAGANVVTQVRTNDTDGYEAVQIAFGEIDPRKVNKPLKGHFAKA 60
Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
+V+P++ L E R D +G + F G VDVTG + GKGF+G MKRHNF GL
Sbjct: 61 DVTPRRHLVEIR-TADASEYTLGQELNADTFEAGLKVDVTGKSKGKGFAGVMKRHNFKGL 119
Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
A HG HRS GS G PGRVFK +MAGRMG RVT +NL V
Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVH 167
>gi|286142622|gb|ADC41341.1| ribosomal protein L3 [Streptomyces coelicolor]
gi|286142624|gb|ADC41342.1| ribosomal protein L3 [Streptomyces coelescens]
gi|286142626|gb|ADC41343.1| ribosomal protein L3 [Streptomyces violaceoruber]
gi|286142628|gb|ADC41344.1| ribosomal protein L3 [Streptomyces sp. DSM 40419]
gi|286142630|gb|ADC41345.1| ribosomal protein L3 [Streptomyces violaceolatus]
gi|286142632|gb|ADC41346.1| ribosomal protein L3 [Streptomyces lividans]
gi|286142634|gb|ADC41347.1| ribosomal protein L3 [Streptomyces sp. BTG 4-758]
gi|286142636|gb|ADC41348.1| ribosomal protein L3 [Streptomyces sp. BTG 4-759]
gi|286142638|gb|ADC41349.1| ribosomal protein L3 [Streptomyces sp. BTG 6-715]
gi|286142640|gb|ADC41350.1| ribosomal protein L3 [Streptomyces sp. BTG 6-708]
gi|286142642|gb|ADC41351.1| ribosomal protein L3 [Streptomyces sp. BTG 717 I]
gi|286142644|gb|ADC41352.1| ribosomal protein L3 [Streptomyces coelicolor]
gi|286142646|gb|ADC41353.1| ribosomal protein L3 [Streptomyces sp. BTG 723 I]
gi|286142648|gb|ADC41354.1| ribosomal protein L3 [Streptomyces sp. BTG 4-723]
gi|286142650|gb|ADC41355.1| ribosomal protein L3 [Streptomyces sp. BTG 4-738]
gi|286142652|gb|ADC41356.1| ribosomal protein L3 [Streptomyces coelicolor]
gi|286142654|gb|ADC41357.1| ribosomal protein L3 [Streptomyces violaceoruber]
Length = 167
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 72/168 (42%), Positives = 96/168 (57%), Gaps = 1/168 (0%)
Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
T V++ R +PVTV+ V RT D +GY +VQ+ GE + V+KP++G F+
Sbjct: 1 TQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60
Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
+V+P++ L E R +G + F G VDVT + GKGF+G MKRHNF G
Sbjct: 61 DVTPRRHLVEIR-TAAASEYTLGQEITAEAFESGVKVDVTAKSKGKGFAGVMKRHNFKGG 119
Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+A+HG HR GS G PGRVFK +MAGRMG RVT +NL V
Sbjct: 120 KASHGAHRVHRMPGSIGGCATPGRVFKGMRMAGRMGNERVTTQNLTVH 167
>gi|286142800|gb|ADC41430.1| ribosomal protein L3 [Streptomyces cinnamoneus]
Length = 167
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 77/168 (45%), Positives = 100/168 (59%), Gaps = 1/168 (0%)
Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
T V++ R +PVTV+ C V RT D +GY +VQ+ GE + V+KP++G F+
Sbjct: 1 TQVWDENNRVVPVTVVKAGPCVVTQVRTNDIDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60
Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
+V+P++ L E R D +G + + F G VDVTG + GKGF+G MKRHNF GL
Sbjct: 61 DVTPRRHLVELR-TADASEYTLGQEITAAVFESGVKVDVTGKSKGKGFAGVMKRHNFKGL 119
Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
A HG HRS GS G PGRVFK +MAGRMG RVT +NL V
Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVH 167
>gi|163804107|ref|ZP_02197891.1| 50S ribosomal protein L3 [Vibrio sp. AND4]
gi|159172077|gb|EDP57032.1| 50S ribosomal protein L3 [Vibrio sp. AND4]
Length = 148
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 69/146 (47%), Positives = 95/146 (65%), Gaps = 2/146 (1%)
Query: 67 GFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKR 126
G F+ V + L+EFR++ D++ VG+ + F + VDVTG + GKGF GA+KR
Sbjct: 5 GHFAKAGVEAGRGLWEFRLENDEE-FAVGAELTVELFNETKKVDVTGTSKGKGFQGAVKR 63
Query: 127 HNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKR 186
NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+V VD +R
Sbjct: 64 WNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVDAER 123
Query: 187 GLILVKGCVPGAKKNSWILVRDSFKS 212
L+L+KG VPG+ + ++V+ + K+
Sbjct: 124 NLLLIKGAVPGSTGGN-VIVKPAVKA 148
>gi|241735550|ref|XP_002413953.1| 60S ribosomal protein L3, putative [Ixodes scapularis]
gi|215507807|gb|EEC17261.1| 60S ribosomal protein L3, putative [Ixodes scapularis]
Length = 390
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 69/225 (30%), Positives = 108/225 (48%), Gaps = 15/225 (6%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN----------GYMAVQV 51
R+GV+ARK+G+ ++ G+RI T+L + + V+ + ++ G + V
Sbjct: 108 RTGVIARKIGIYPMWTTSGKRILTTLLQVLDNHVIRYIPSEEYASSRFGFKAKGRGCLVV 167
Query: 52 GAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDV 111
GAG A P F V PK+KL F + DD + G+ S +F G V+V
Sbjct: 168 GAGSADPMLFKAPYLRLFQESGVMPKRKLTRFLIT-DDAAIQPGTPLSAGHFRAGDYVNV 226
Query: 112 TGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171
G T G GF G MKR G +HG + +HR G+ G + + K K+M G MG R
Sbjct: 227 YGKTRGHGFQGVMKRWKMKGGPKSHGTTKAHRRLGAIGGPRGI--ILKGKRMPGHMGQER 284
Query: 172 VTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVN 215
+ L++ ++ K ++ V+G VPGA S++ + DS
Sbjct: 285 RLLVGLKIWRINTKLNVLFVQGPAVPGA-TLSYVNIYDSRHGKKK 328
>gi|286142692|gb|ADC41376.1| ribosomal protein L3 [Streptomyces acrimycini]
Length = 167
Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats.
Identities = 76/168 (45%), Positives = 98/168 (58%), Gaps = 1/168 (0%)
Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
T V++ R +PVTV+ V RT D +GY +VQ+ GE + V+KP++G F+
Sbjct: 1 TQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESVQIAFGEIDPRKVNKPLKGHFAKA 60
Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
+V+P++ L E R D +G + F G VDVTG + GKGF+G MKRHNF GL
Sbjct: 61 DVTPRRHLVEIR-TADASEYTLGQEVTAEVFEAGVKVDVTGKSKGKGFAGVMKRHNFKGL 119
Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
A HG HRS GS G PGRVFK +MAGRMG RVT +NL V
Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVH 167
>gi|286142618|gb|ADC41339.1| ribosomal protein L3 [Streptomyces tuirus]
Length = 167
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 75/168 (44%), Positives = 98/168 (58%), Gaps = 1/168 (0%)
Query: 13 TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV 72
T V++ R +PVTV+ V RT D +GY ++Q+ GE + V+KP++G F+
Sbjct: 1 TQVWDENNRVVPVTVVKAGPNVVTQVRTNDVDGYESIQIAFGEIDPRKVNKPLKGHFAKA 60
Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
+V+P++ L E R D +G + F G VDVTG + GKGF+G MKRHNF GL
Sbjct: 61 DVTPRRHLVEIR-TADASEYTLGQEVTAEVFESGVKVDVTGKSKGKGFAGVMKRHNFKGL 119
Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
A HG HRS GS G PGRVFK +MAGRMG RVT +NL V
Sbjct: 120 GAGHGTQRKHRSPGSIGGCATPGRVFKGLRMAGRMGNERVTTQNLTVH 167
>gi|262158450|ref|ZP_06029565.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae INDRE 91/1]
gi|262029611|gb|EEY48260.1| LSU ribosomal protein L3p (L3e) [Vibrio cholerae INDRE 91/1]
Length = 151
Score = 152 bits (383), Expect = 5e-35, Method: Composition-based stats.
Identities = 70/153 (45%), Positives = 95/153 (62%), Gaps = 2/153 (1%)
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+ G F+ V + L+EFR++ ++ VGS + F + VDVTG + GKG
Sbjct: 1 MLLSQKAGHFAKAGVEAGRGLWEFRLENGEE-FAVGSELTVELFNEVKKVDVTGTSKGKG 59
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F GA+KR NF THG S+SHR+ GS G Q PGRVFK KKMAG MG RVT +NLE+
Sbjct: 60 FQGAVKRWNFRTQDMTHGNSLSHRAPGSIGQCQTPGRVFKGKKMAGHMGAERVTTQNLEI 119
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
V VD +R L+L+KG VPGA + ++V+ + K+
Sbjct: 120 VRVDAERNLLLIKGAVPGATGGN-VIVKPAVKA 151
>gi|332178455|gb|AEE14144.1| 50S ribosomal protein L3 [Thermodesulfobium narugense DSM 14796]
Length = 208
Score = 151 bits (382), Expect = 6e-35, Method: Composition-based stats.
Identities = 76/208 (36%), Positives = 115/208 (55%), Gaps = 7/208 (3%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G+V +K+GMT G IPVTV+ V RT++K+GY A++V E +
Sbjct: 4 MFMGLVGKKIGMTSYITPSG-VIPVTVVQAIKGTVADKRTIEKDGYEAIRVAFQECSERK 62
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++KP G F ++ P KK+ V+ + L VG S F+VG ++VTG+T G G
Sbjct: 63 INKPELGLFKKASIKPHKKI----VEFQNSNLNVGDTLDISMFSVGDSINVTGITRGFGT 118
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G +KR F +HG S + R GSTG ++ K KKM G MG + TVKN+ VV
Sbjct: 119 AGTIKRWKFQRGPMSHG-SKNIRKIGSTGVGTGMSKIIKGKKMPGHMGNVKRTVKNISVV 177
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRD 208
+ + L+++KG +PG KNS++++
Sbjct: 178 DLMPEDYLVILKGSIPG-HKNSFVILYK 204
>gi|217073404|gb|ACJ85061.1| unknown [Medicago truncatula]
Length = 243
Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats.
Identities = 76/189 (40%), Positives = 99/189 (52%), Gaps = 2/189 (1%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
GV+ KLGM + G +PVTV+ + V +T +GY AVQVG + + +
Sbjct: 56 VGVMGTKLGMMSFFQPNGEVVPVTVVGFKEGNIVTQIKTDATDGYNAVQVGYRRVRDRKL 115
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G P L EFR+Q D P + F G LVDV+G TIGKGF
Sbjct: 116 TKPEMGHLEKAGAIPMHHLQEFRLQSVDGFEPNQRLVFDELFNEGDLVDVSGTTIGKGFQ 175
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRHNF +HG S SHR GS G PGRV+K KKM GRMGG + L++V
Sbjct: 176 GGIKRHNFKRGPMSHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTNRKTRKLKIVK 234
Query: 182 VDDKRGLIL 190
+D +I+
Sbjct: 235 IDKDLNVIM 243
>gi|168038916|ref|XP_001771945.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676727|gb|EDQ63206.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 214
Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats.
Identities = 72/197 (36%), Positives = 105/197 (53%), Gaps = 3/197 (1%)
Query: 15 VYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVN 73
V+ +G+ +P TV+ + V ++ +GY AVQVG + + ++KP G + V
Sbjct: 11 VFTEDGKAVPCTVVGFHEGNIVTQVKSDATDGYTAVQVGYRRVRDRKLTKPQLGHLNKVG 70
Query: 74 VSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLR 133
P + L EFRV + P + F G L+DV G +IGKGF G +KR+NF +
Sbjct: 71 AIPMRHLQEFRVVSAEGYEPNQVLQLEEIFKEGDLIDVVGNSIGKGFQGGIKRYNFARGQ 130
Query: 134 ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKG 193
THG S S R GS G PGRV+ KKM G+MG R ++ LE+V VD + +L+KG
Sbjct: 131 MTHG-SKSKRQLGSIGAGTTPGRVYPGKKMPGQMGSGRAKIRKLEIVKVDPELRALLIKG 189
Query: 194 CVPGAKKNSWILVRDSF 210
VPG N + + +
Sbjct: 190 SVPGKPGN-LLRITPAK 205
>gi|21553426|gb|AAM62519.1| 50S ribosomal protein L3 [Arabidopsis thaliana]
Length = 271
Score = 150 bits (380), Expect = 9e-35, Method: Composition-based stats.
Identities = 81/209 (38%), Positives = 115/209 (55%), Gaps = 3/209 (1%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
GV+ KLGM + +G +PVTV+ + V +TL +GY AVQ+G + K +
Sbjct: 56 IGVMGSKLGMMSFFEEDGTVVPVTVVGFREGNIVTQIKTLATDGYDAVQIGYRRVRDKKL 115
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G P + L EFR+ + P + F G LVDV G TIGKGF
Sbjct: 116 TKPETGHLQKAGTIPMRHLQEFRLTNIEGFEPNQKLVFDEIFKEGDLVDVAGTTIGKGFQ 175
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRH+F + THG S SHR+ GS G PGRV+K KKM GRMGG R ++ L++V
Sbjct: 176 GGIKRHHFKRGQMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTRTKIRKLKIVK 234
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
VD + ++++KG +PG N + + +
Sbjct: 235 VDKELNVVMIKGALPGKPGN-LLRITPAK 262
>gi|15224205|ref|NP_181831.1| ribosomal protein L3 family protein [Arabidopsis thaliana]
gi|42559537|sp|Q9SKX4|RK3A_ARATH RecName: Full=50S ribosomal protein L3-1, chloroplastic; Flags:
Precursor
gi|4531443|gb|AAD22128.1| 50S ribosomal protein L3 [Arabidopsis thaliana]
gi|110740515|dbj|BAE98363.1| 50S ribosomal protein L3 [Arabidopsis thaliana]
gi|208879532|gb|ACI31311.1| At2g43030 [Arabidopsis thaliana]
gi|330255107|gb|AEC10201.1| 50S ribosomal protein L3-1 [Arabidopsis thaliana]
Length = 271
Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 81/209 (38%), Positives = 115/209 (55%), Gaps = 3/209 (1%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
GV+ KLGM + +G +PVTV+ + V +TL +GY AVQ+G + K +
Sbjct: 56 IGVMGSKLGMMSFFEEDGTVVPVTVVGFREGNIVTQIKTLATDGYDAVQIGYRRVRDKKL 115
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G P + L EFR+ + P + F G LVDV G TIGKGF
Sbjct: 116 TKPETGHLQKAGTIPMRHLQEFRLTNIEGFEPNQKLVFDEIFKEGDLVDVAGTTIGKGFQ 175
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRH+F + THG S SHR+ GS G PGRV+K KKM GRMGG R ++ L++V
Sbjct: 176 GGIKRHHFKRGQMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTRTKIRKLKIVK 234
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
VD + ++++KG +PG N + + +
Sbjct: 235 VDKELNVVMIKGALPGKPGN-LLRITPAK 262
>gi|329942411|ref|ZP_08291221.1| ribosomal L3 family protein [Chlamydophila psittaci Cal10]
gi|328815321|gb|EGF85309.1| ribosomal L3 family protein [Chlamydophila psittaci Cal10]
Length = 208
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 70/196 (35%), Positives = 102/196 (52%), Gaps = 8/196 (4%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK------NVSKPM 65
M V++ +G + +V+ + + V + +GY A+Q+GA E V V+KP
Sbjct: 1 MIHVFDKDGNLVACSVISMSSNVVTQIKVDSTDGYNAIQMGANEINVPEKTLQKRVNKPS 60
Query: 66 RGFFSSVNVSPKKKLFEFRVQKDD-DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
G F + L E R+ ++ + + +GS F F VD++G++ GKGF G M
Sbjct: 61 LGHFKKSGSRVFRSLKEVRLSEEAVNEVSLGSEFGLEVFESVSSVDISGVSKGKGFQGVM 120
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR F G +HG S HR GS G R PGR F K MG VTVKNLEV+ VD
Sbjct: 121 KRFGFRGGPQSHG-SGFHRHAGSIGMRSTPGRCFPGSKRPSHMGTVNVTVKNLEVIKVDL 179
Query: 185 KRGLILVKGCVPGAKK 200
++ ++LVKG +PG +
Sbjct: 180 EKKVLLVKGAIPGPRG 195
>gi|297824271|ref|XP_002880018.1| 50S ribosomal protein L3 [Arabidopsis lyrata subsp. lyrata]
gi|297325857|gb|EFH56277.1| 50S ribosomal protein L3 [Arabidopsis lyrata subsp. lyrata]
Length = 271
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 81/209 (38%), Positives = 115/209 (55%), Gaps = 3/209 (1%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
GV+ KLGM + +G +PVTV+ + V +TL +GY AVQ+G + K +
Sbjct: 56 IGVMGSKLGMMSFFEEDGTVVPVTVVGFREGNIVTQIKTLATDGYDAVQIGYRRVRDKKL 115
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G P + L EFR+ + P + F G LVDV G TIGKGF
Sbjct: 116 TKPETGHLQKAGTIPMRHLQEFRLTNIEGFEPNQKLVFDEIFKEGDLVDVAGTTIGKGFQ 175
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRH+F + THG S SHR+ GS G PGRV+K KKM GRMGG R ++ L++V
Sbjct: 176 GGIKRHHFKRGQMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTRTKIRKLKIVK 234
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
VD + ++++KG +PG N + + +
Sbjct: 235 VDKELNVVMIKGALPGKPGN-LLRITPAK 262
>gi|316967931|gb|EFV52284.1| electron transfer flavoprotein, alpha subunit [Trichinella
spiralis]
Length = 822
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 71/226 (31%), Positives = 107/226 (47%), Gaps = 21/226 (9%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLH----LDNCQVVVHRTLDKN-GYMAV------- 49
R+G+V RK+G+ Y G R+ T+L + + V+ + +K Y +
Sbjct: 175 RTGLVCRKIGVIPQYFKNGTRVLCTLLEAKEKVLDNHVISYTDPEKWYKYSKIGKKEGLK 234
Query: 50 -----QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
VG + + RG F V PK+KL F + + + G+ ++FT
Sbjct: 235 MLGRLTVGVQSDDPQKFTAAYRGIFEKAGVLPKQKLAAFAITPNA-QIQPGTRLYANHFT 293
Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
VGQ VDV G TI GF G M R F G+ ATHGV+ +HR GS G V KKM
Sbjct: 294 VGQYVDVWGHTIDYGFQGVMVRWGFKGMPATHGVTKTHRRPGSIGTAG-QACVKPGKKMP 352
Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDS 209
G MG ++ ++++ ++ ++ VKG VPG + I V+DS
Sbjct: 353 GHMGSEWRALRGIQILRINTAEQVLYVKGPNVPGPV-GTLIYVKDS 397
>gi|221125421|ref|XP_002162736.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
Length = 271
Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats.
Identities = 66/216 (30%), Positives = 112/216 (51%), Gaps = 10/216 (4%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQV--VVHRTLD--KNGYMAVQVGAGEAK 57
R G + KLG++ ++ G VT++ + +CQV D +G + +G +
Sbjct: 14 RVGALGIKLGVSVLWTKNGFCHMVTLVQIKDCQVIDTQISCEDGGNDGITQMLLGCCDIT 73
Query: 58 VKNV----SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTG 113
NV + ++ N+ PK+ F V K+ LL G+ + +F GQ V V G
Sbjct: 74 DDNVLAKLPRDHVLWYDQRNLFPKQYWTGFPVTKNA-LLFPGTKITSLHFQPGQHVVVQG 132
Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
++I KGF G M+R G +HG +++HR G TG QDPGR+F K MAG +G + T
Sbjct: 133 ISIDKGFQGVMRRWGMKGQPQSHGQTLTHRKMGGTGGGQDPGRIFPGKHMAGHVGRDYAT 192
Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
V L ++ ++ K ++ ++G +PG + ++ ++DS
Sbjct: 193 VGPLRILRINTKFNVLYIRGGIPG-EIGGFLKIKDS 227
>gi|42559164|sp|O80360|RK3_TOBAC RecName: Full=50S ribosomal protein L3, chloroplastic; Flags:
Precursor
gi|189096128|pdb|3BBO|F Chain F, Homology Model For The Spinach Chloroplast 50s Subunit
Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome
gi|3298437|dbj|BAA31509.1| chloroplast ribosomal protein L3 [Nicotiana tabacum]
Length = 259
Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats.
Identities = 83/209 (39%), Positives = 116/209 (55%), Gaps = 3/209 (1%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
GV+A KLGM + G +PVTV+ + V +T +GY AVQVG + + +
Sbjct: 44 VGVMATKLGMMSFFEESGTVVPVTVVGFREGNIVTQIKTEATDGYNAVQVGYRRVRDRKL 103
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G + P + L EFR+Q D + F G LVDV+G TIGKGF
Sbjct: 104 TKPEMGHLEKSGIIPLRHLQEFRLQSIDGFEVTQKLDFGELFKEGDLVDVSGTTIGKGFQ 163
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRHNF + THG S SHR GS G PGRV+K KKM GRMGG + ++ L++V
Sbjct: 164 GGIKRHNFKRGQMTHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVK 222
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
+DD+ +I++KG +PG N + + +
Sbjct: 223 IDDQLNIIMIKGALPGKPGN-LLRIAPAK 250
>gi|68066851|ref|XP_675399.1| 50S ribosomal protein L3 [Plasmodium berghei strain ANKA]
gi|56494563|emb|CAH99831.1| 50S ribosomal protein L3, putative [Plasmodium berghei]
Length = 335
Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats.
Identities = 74/216 (34%), Positives = 114/216 (52%), Gaps = 4/216 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+G++ K+G +++I G + VTV+ +DNC V+ + + KNGY A++VG G V
Sbjct: 74 RTGLLGYKVGCMSIWDIWGVKHAVTVVKIDNCYVLNQKNITKNGYEALEVGIGNMNVIKQ 133
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SK G + + K+ EF+ D LPV FS +F+ GQ + ++ KGF
Sbjct: 134 SKNNIGNYIKRRLGFIHKIREFKCTS-DCFLPVQHKFSARHFSPGQNLFISSSIKNKGFC 192
Query: 122 GAMKRHNFGGLRATHGV-SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR-VTVKNLEV 179
GAMK+ NF G +HG S +HRS GS + VF+NKKM +G V N ++
Sbjct: 193 GAMKKWNFSGKNKSHGTESKAHRSLGSVSMGKTINIVFRNKKMNTHIGEKSLVKCSNNKL 252
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
++ + L+ +KG + G KN I + D+ A N
Sbjct: 253 FRINSLKNLLFIKGSI-GGYKNKVIKISDAKGRAFN 287
>gi|314984887|gb|EFT28979.1| 50S ribosomal protein L3 [Propionibacterium acnes HL005PA1]
Length = 173
Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats.
Identities = 83/170 (48%), Positives = 105/170 (61%), Gaps = 2/170 (1%)
Query: 46 YMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTV 105
Y AVQ+G G + NV+KP G F V+P++ L E R D +G + F+
Sbjct: 1 YSAVQLGYGAVQAHNVTKPEAGPFEKAGVTPRRHLVELR-TADASEYTLGQEIAADVFSE 59
Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165
VDVTG + GKG +G MKRH FGGLRATHGV HRS GS G PG+V K +MAG
Sbjct: 60 SDFVDVTGTSKGKGTAGVMKRHGFGGLRATHGVHRKHRSPGSIGGCSTPGKVIKGLRMAG 119
Query: 166 RMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
RMG RVTV+NL+V SVD +RG++LV+G VPG K S ++VR + K A
Sbjct: 120 RMGVERVTVQNLQVHSVDAERGIMLVRGAVPGP-KGSLLVVRSAAKKAAK 168
>gi|82593828|ref|XP_725167.1| ribosomal protein L3 [Plasmodium yoelii yoelii str. 17XNL]
gi|23480072|gb|EAA16732.1| ribosomal protein L3, putative [Plasmodium yoelii yoelii]
Length = 335
Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats.
Identities = 74/216 (34%), Positives = 114/216 (52%), Gaps = 4/216 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+G++ K+G +++I G + VTV+ +DNC V+ + + KNGY A++VG G V
Sbjct: 74 RTGLLGYKVGCMSLWDIWGVKHAVTVVKIDNCYVLNQKNITKNGYEALEVGIGNMNVIKQ 133
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SK G + + K+ EF+ D LPV FS +F+ GQ + ++ KGF
Sbjct: 134 SKNNIGNYIKRRLGFIHKIREFKCTS-DCFLPVQHKFSARHFSPGQNLFISSSIKNKGFC 192
Query: 122 GAMKRHNFGGLRATHGV-SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR-VTVKNLEV 179
GAMK+ NF G +HG S +HRS GS + VF+NKKM +G V N ++
Sbjct: 193 GAMKKWNFSGKNKSHGTESKAHRSLGSVSMGKTINIVFRNKKMNTHIGEKSLVKCSNNKL 252
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
++ + L+ +KG + G KN I + D+ A N
Sbjct: 253 FRINSLKNLLFIKGSI-GGYKNKVIKISDAKGRAFN 287
>gi|268574488|ref|XP_002642221.1| Hypothetical protein CBG18195 [Caenorhabditis briggsae]
gi|187025223|emb|CAP35690.1| hypothetical protein CBG_18195 [Caenorhabditis briggsae AF16]
Length = 402
Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats.
Identities = 72/212 (33%), Positives = 97/212 (45%), Gaps = 19/212 (8%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH---------------RTLDKNGY 46
R G+V RK+GM + EG RI T+L +D VV + +++G
Sbjct: 102 RVGLVVRKIGMLPQWTKEGGRILCTILEVDENHVVGITSPDSWYKASAIGKRKAFNRHGP 161
Query: 47 MAV-QVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTV 105
M VGA N + R F+ V K+ L F V + D L +G +F V
Sbjct: 162 MWRVTVGATNQDPTNYTSAYRKKFTRAGVPVKETLGCFLVTE-DALPLLGQPLDARHFEV 220
Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165
GQ V TG TI GF G M R G T + SHR GS G D R++ K+M G
Sbjct: 221 GQYVTATGKTIDWGFQGGMHRWGMRGQP-TRRTTKSHRRIGSVGSVGDA-RIWPGKRMPG 278
Query: 166 RMGGNRVTVKNLEVVSVDDKRGLILVKGCVPG 197
MG TV LE+V ++ + ++ VKG VPG
Sbjct: 279 HMGYEWKTVSGLEIVRINIDKQVMYVKGSVPG 310
>gi|124806820|ref|XP_001350840.1| mitochondrial ribosomal protein L3 precursor, putative [Plasmodium
falciparum 3D7]
gi|23496969|gb|AAN36520.1| mitochondrial ribosomal protein L3 precursor, putative [Plasmodium
falciparum 3D7]
Length = 341
Score = 144 bits (364), Expect = 7e-33, Method: Composition-based stats.
Identities = 73/216 (33%), Positives = 115/216 (53%), Gaps = 4/216 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
RSG++ K+G ++++ G + VTV+ +DNC V+ +T+ KNGY A+++G G V
Sbjct: 80 RSGLLGYKVGCMSIWDVWGVKHAVTVVKIDNCYVINQKTISKNGYEALELGVGNMNVIKQ 139
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SK G F + K+ EF+ D LP+ FS +F+ GQ + ++ KGF
Sbjct: 140 SKNNIGNFIKRKLGFIHKIKEFKCTS-DCFLPIHHKFSCRHFSPGQNLFISSGIKNKGFC 198
Query: 122 GAMKRHNFGGLRATHGV-SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR-VTVKNLEV 179
GAMK+ NF G +HG S +HRS GS + VF+NKKM +G V N ++
Sbjct: 199 GAMKKWNFSGKNKSHGTESKAHRSLGSVSMGKTINIVFRNKKMNTHIGEKSLVKCSNNKL 258
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
++ + L+ +KG + G KN I + D+ + N
Sbjct: 259 FRINSLKNLLFIKGTI-GGYKNKVIKISDAKGRSFN 293
>gi|240279928|gb|EER43432.1| 50S ribosomal protein L3 [Ajellomyces capsulatus H143]
Length = 247
Score = 144 bits (364), Expect = 7e-33, Method: Composition-based stats.
Identities = 71/188 (37%), Positives = 112/188 (59%), Gaps = 2/188 (1%)
Query: 30 LDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDD 89
+ ++ KNGY AVQ+G G + V++PM G F++ V+PK+ + EFRV+ ++
Sbjct: 47 IGPNLPILTSHPSKNGYYAVQIGCGWKHERAVTRPMLGHFAANGVAPKRHIHEFRVKDEN 106
Query: 90 DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHR-SHGST 148
LLP+G + + ++F GQ VD + G GF+G MKRH F G +HGVS++HR S
Sbjct: 107 GLLPIGEMINANWFQEGQYVDARSNSRGMGFAGVMKRHGFHGQDRSHGVSLTHRSMGSSG 166
Query: 149 GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRD 208
+ RV+ KKMAG MG +VT++NL+V+ VD ++G+++V G V G K + ++D
Sbjct: 167 PGQGGGSRVYPGKKMAGNMGNKQVTLQNLKVLKVDAEKGIVVVNGNVSGP-KGCIVKLQD 225
Query: 209 SFKSAVNC 216
+ K
Sbjct: 226 ALKKPWPT 233
>gi|221061915|ref|XP_002262527.1| 50S ribosomal protein L3 [Plasmodium knowlesi strain H]
gi|193811677|emb|CAQ42405.1| 50S ribosomal protein L3, putative [Plasmodium knowlesi strain H]
Length = 336
Score = 144 bits (364), Expect = 7e-33, Method: Composition-based stats.
Identities = 75/222 (33%), Positives = 118/222 (53%), Gaps = 5/222 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+G++A K+G ++++ G + VTV ++NC V+ + + KNGY A++VG G V
Sbjct: 75 RTGLLAYKVGCMSIWDVWGVKHAVTVAKVNNCYVLNQKNITKNGYEALEVGIGNMNVIKQ 134
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SK G + + K+ EF+ D LPV FS +F+ GQ + ++ KGF
Sbjct: 135 SKNNIGNYIKRKLGFIHKIKEFKCTH-DCFLPVQHKFSVRHFSPGQNLFISSTVKNKGFC 193
Query: 122 GAMKRHNFGGLRATHGV-SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR-VTVKNLEV 179
GAMK+ NF G A+HG S +HRS GS + VF++KKM +G V N ++
Sbjct: 194 GAMKKWNFSGKNASHGTESKAHRSLGSVSMGKTVNIVFRHKKMNTHIGEKNLVKCSNNKL 253
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC-KGKV 220
++ + L+ +KG + G KN I + D+ A N K K+
Sbjct: 254 FRINSLQNLLFIKGSI-GGYKNKIIKISDAKGRAFNKFKDKI 294
>gi|324516671|gb|ADY46600.1| 39S ribosomal protein L3 [Ascaris suum]
Length = 401
Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 72/232 (31%), Positives = 105/232 (45%), Gaps = 20/232 (8%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN----------------G 45
R G++ARKLGM + G R+ T+L VV +
Sbjct: 96 RVGLLARKLGMLPQWLNNGTRVLCTMLEFPENCVVSAIDPETWYRKSIVGKKKAFGIQGP 155
Query: 46 YMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTV 105
V VGA A + R F + K+ L F V + D ++ G+ +F+V
Sbjct: 156 MWKVTVGAVNADPSKFTHVYRDIFMRQGLPVKQHLGSFVVTE-DAVVAPGTPLHVCHFSV 214
Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165
GQ + VTG TI GF G M R G+ A + + SHR GS G D RV+ K+M G
Sbjct: 215 GQYIAVTGRTIDWGFQGGMHRWGMKGMPA-NRTTKSHRRIGSIGSTGDA-RVWPGKRMPG 272
Query: 166 RMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
MG VT LEV+ ++ + ++ +KGCVPG + +LV+D + + K
Sbjct: 273 HMGYEWVTTSGLEVLRINPGKQVMYIKGCVPG-EVGEILLVKDCLQPSKRVK 323
>gi|323308966|gb|EGA62197.1| Mrpl9p [Saccharomyces cerevisiae FostersO]
Length = 235
Score = 143 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 77/178 (43%), Positives = 107/178 (60%), Gaps = 2/178 (1%)
Query: 2 RSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
R G++ RK GM ++ G R T+L ++N +V++HRT + NGY A QVG G +
Sbjct: 58 RCGLITRKKGMMPYFDKSTGERSAATILEVNNVEVIMHRTSEVNGYFACQVGYGSRHLSK 117
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVF-SPSYFTVGQLVDVTGMTIGKG 119
VS+ M G F+S V+PK+ + EFRV+ + + + + +F GQ VDV ++ GKG
Sbjct: 118 VSRQMLGHFASKVVNPKEHVAEFRVKDEKGINTTWHIIETVFFFKEGQYVDVRSVSKGKG 177
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
F+G MKR+ F GLRA+HG SI HR GS G QDPGRV +KM G MG VT+
Sbjct: 178 FTGVMKRYGFKGLRASHGTSIMHRHGGSYGQNQDPGRVLPGRKMPGHMGNEHVTIXKC 235
>gi|218463388|ref|ZP_03503479.1| 50S ribosomal protein L3 [Rhizobium etli Kim 5]
Length = 159
Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 109/159 (68%), Positives = 128/159 (80%), Gaps = 1/159 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
MRSGV+A+K+GMT VYN G +PVTVL +D CQVV RT++KNGY AVQ+GAG+AKVKN
Sbjct: 1 MRSGVIAQKVGMTRVYNDAGEHVPVTVLRMDGCQVVATRTVEKNGYTAVQLGAGQAKVKN 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
SK MRG F+ NV PK KL EFRV + D+LL +G+ +F GQLVDVTG TIGKGF
Sbjct: 61 TSKAMRGNFAVANVEPKAKLAEFRVSE-DNLLEIGTEIKAGHFAAGQLVDVTGTTIGKGF 119
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159
+GAMKRH FGGLRATHGVS+SHRSHGSTG RQDPG+VF+
Sbjct: 120 AGAMKRHGFGGLRATHGVSVSHRSHGSTGSRQDPGKVFQ 158
>gi|255565958|ref|XP_002523967.1| 50S ribosomal protein L3, putative [Ricinus communis]
gi|223536694|gb|EEF38335.1| 50S ribosomal protein L3, putative [Ricinus communis]
Length = 285
Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats.
Identities = 80/209 (38%), Positives = 116/209 (55%), Gaps = 3/209 (1%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
GV+ KLGM + +G +PVTV+ + V +T +GY +VQVG + + +
Sbjct: 70 IGVMGTKLGMMSYFESDGTVVPVTVVGFREGNIVTQIKTEATDGYDSVQVGYRRIRDRKL 129
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G V P + L EFR+Q D + F G LVDV+G+TIGKGF
Sbjct: 130 TKPELGHLEKAGVIPMRHLQEFRLQNIDGFEVGQKLVLEEIFKEGDLVDVSGITIGKGFQ 189
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KRHNF + THG S SHR+ GS G PGRV+K KKM GRMGG + ++ L++V
Sbjct: 190 GGIKRHNFKRGQMTHG-SKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTKTKIRKLKIVK 248
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSF 210
+D+ +++KG +PG N + + +
Sbjct: 249 IDNDLRAVMIKGALPGKPGN-LLRIAPAK 276
>gi|325116477|emb|CBZ52031.1| putative 50S ribosomal protein L3 [Neospora caninum Liverpool]
Length = 447
Score = 140 bits (354), Expect = 9e-32, Method: Composition-based stats.
Identities = 61/202 (30%), Positives = 93/202 (46%), Gaps = 6/202 (2%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ARK+ MT ++ +G+ PVT+L + +V G V A + + V +P
Sbjct: 199 LLARKIDMTACFSPDGQAEPVTLLQVIPATIVQFLEY---GKAVVSYDAPKRRRLFVKRP 255
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+ G V + + ++ +G V S + V V + KGF G +
Sbjct: 256 VLGKLQRVGATGFETATLTVRPPNE--FVLGQVLDVSSLMGAKHVHVRALKKAKGFQGIV 313
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
RH F THG S HR GS G DPGRV +MAGR TV+NL V+ +
Sbjct: 314 SRHGFHRGPMTHG-STHHRGPGSVGAGTDPGRVLPGTRMAGRDKAKYATVRNLRVLGFNP 372
Query: 185 KRGLILVKGCVPGAKKNSWILV 206
K+ L++V+G VPG + + V
Sbjct: 373 KQNLLIVRGSVPGWDMRTVVHV 394
>gi|294950331|ref|XP_002786576.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239900868|gb|EER18372.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 334
Score = 140 bits (354), Expect = 9e-32, Method: Composition-based stats.
Identities = 68/200 (34%), Positives = 97/200 (48%), Gaps = 3/200 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G+ A K+G +++ G++ VTV + N V+ +T+ +NGY A+QVG G +
Sbjct: 77 RPGICAFKIGCMGLWDEWGQKHAVTVCKVHNSHVMRQKTIARNGYEALQVGTGWRTLGLH 136
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+ G V PK + EFRV D +LPVG FS +F GQ V V+G + GKG+
Sbjct: 137 ERRRIGCCIRAGVEPKHHIEEFRVSS-DCMLPVGHEFSVRHFVPGQRVFVSGWSRGKGWQ 195
Query: 122 GAMKRHNFG-GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G + R F + R GS +V K KK G MG + V N V
Sbjct: 196 GVVTRWRFAGEGPIRCAATGGMRMPGSISRGMSSSKVDKYKKQPGHMGPDPR-VTNCTVF 254
Query: 181 SVDDKRGLILVKGCVPGAKK 200
++ R LI +KG VPG+
Sbjct: 255 RIESTRNLIFLKGAVPGSAG 274
>gi|198423016|ref|XP_002125651.1| PREDICTED: similar to mitochondrial ribosomal protein L3 [Ciona
intestinalis]
Length = 392
Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 58/210 (27%), Positives = 98/210 (46%), Gaps = 6/210 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYM--AVQVGAGEAKVK 59
R G V KLG+ ++ +G T++ + +C V+ + + ++ AV +G A
Sbjct: 136 RCGAVGIKLGVHPIWFKDGTYANCTLIQIQDCHVIKYFSKEEYNTKTAAVIIGGKNASPF 195
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
++ F V K K F F + ++ L G+ + +F GQ VD T +IG G
Sbjct: 196 YKNEKYHEFCREAGVPVKAKCFRFLISENAA-LKPGTEITAMHFKPGQFVDCTAQSIGYG 254
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G ++R +F G A R G G V K KKMAG++GG + L+V
Sbjct: 255 FQGVIQRWHFAGGHARKDKKWMRRPGSIGG--SQIGWVMKGKKMAGQLGGTNEITRGLKV 312
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
+ ++ + ++ VKG + G N ++ + DS
Sbjct: 313 LRINTRYNVLYVKGRIAG-HINQFVKIADS 341
>gi|221054630|ref|XP_002258454.1| large ribosomal subunit protein l3, prokaryotic (50s)-like
[Plasmodium knowlesi strain H]
gi|193808523|emb|CAQ39226.1| large ribosomal subunit protein l3, prokaryotic (50s)-like,
putative [Plasmodium knowlesi strain H]
Length = 315
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 64/213 (30%), Positives = 103/213 (48%), Gaps = 7/213 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R + +K+ M +++ G IP T++ + + +R LD G + + G + + +
Sbjct: 92 RIQIRGKKIEMRSIFSPNGELIPATLIEIMPNVI--YRFLD-FGKVGIAYGKPLDESRWI 148
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
KP G + V + K +G + SY + V+V G++ GKGF
Sbjct: 149 LKPEIGQIAKVGCNYKNTCSLTLTPP--QNFVLGQIIDVSYLYNYKYVNVRGLSKGKGFC 206
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR F THG S HR GS G GRV K KKM G+ G T+ NL+++
Sbjct: 207 GVIKRWGFRRGPMTHGSSH-HRKPGSIGASTHIGRVLKGKKMPGKHGNKYRTMINLKLLG 265
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
++ +R ILV GC+PG +NS++ V + + V
Sbjct: 266 LNLERNEILVSGCIPG-NRNSYVTVTATRDNKV 297
>gi|156095889|ref|XP_001613979.1| 50S ribosomal protein L3 [Plasmodium vivax SaI-1]
gi|148802853|gb|EDL44252.1| 50S ribosomal protein L3, putative [Plasmodium vivax]
Length = 336
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 74/222 (33%), Positives = 118/222 (53%), Gaps = 5/222 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+G++A K+G ++++ G + VTV +++C V+ + + KNGY A+++G G V
Sbjct: 75 RTGLLAYKVGCMSIWDVWGVKHAVTVAKINHCYVLNQKNITKNGYEALEIGIGNMNVVKQ 134
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SK G + + K+ EF+ D LPV FS +F+ GQ + ++ KGF
Sbjct: 135 SKNNIGNYIKRKLGFIHKIKEFKCTS-DCFLPVQHKFSARHFSPGQNLFISSTIKSKGFC 193
Query: 122 GAMKRHNFGGLRATHGV-SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR-VTVKNLEV 179
GAMK+ NF G A+HG S +HRS GS + VF+NKKM +G V N ++
Sbjct: 194 GAMKKWNFSGKNASHGTESKAHRSLGSVSMGKTVNIVFRNKKMNTHIGEKTLVKCSNNKL 253
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC-KGKV 220
++ + L+ +KG + G KN I + D+ A N K K+
Sbjct: 254 FRINSLQNLLFIKGPI-GGYKNKIIKISDAKGRAFNKFKDKI 294
>gi|256087284|ref|XP_002579802.1| 50S ribosomal protein L3 [Schistosoma mansoni]
gi|238665289|emb|CAZ36041.1| 50S ribosomal protein L3, putative [Schistosoma mansoni]
Length = 394
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 64/235 (27%), Positives = 109/235 (46%), Gaps = 30/235 (12%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTL-DKNGYMAVQ---------- 50
R G++A KLG+ ++ G+++ T+ + + + + + + Y+++
Sbjct: 96 RCGLIAIKLGVYPLWTKTGKKMDCTIFQIPDNHAIRYTPPSEIDKYISLLHPRHYWLNNK 155
Query: 51 ---------------VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVG 95
VGA A + G F + PK+K+ F V D L G
Sbjct: 156 RPPSWITQKRWGIQLVGAFSADPIEFTSEWCGLFKEAGIPPKRKISRFLVSPDAA-LKPG 214
Query: 96 SVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155
+ S ++F VG +D+T TI +GF G ++R G A HG + HR GS R P
Sbjct: 215 TPLSVNHFRVGDYLDITARTINRGFEGVIERWGMKGGPAAHGSTKFHRRMGSAAGRGGP- 273
Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
+ + K+MAG MG +++ + +V ++ K GLI V G PG +S+ L+ DS+
Sbjct: 274 -IVRGKRMAGVMGNRFRSLRGVMIVRINPKLGLIYVPGTTPGPV-HSYCLLNDSW 326
>gi|330902741|gb|EGH33754.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. japonica str.
M301072PT]
Length = 143
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 73/144 (50%), Positives = 92/144 (63%), Gaps = 3/144 (2%)
Query: 69 FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128
F+ NV+ + + EFR+++ D G F GQLVDVTG + GKGF G +KR N
Sbjct: 1 FAKANVAAGRTVMEFRLEEGD--YQAGDQIKAEIFAAGQLVDVTGQSKGKGFQGTIKRWN 58
Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL 188
F G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV VD +R L
Sbjct: 59 FRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVVRVDAERNL 118
Query: 189 ILVKGCVPGAKKNSWILVRDSFKS 212
+LVKG VPGA + + VR + K+
Sbjct: 119 LLVKGAVPGATGGNLV-VRPAAKA 141
>gi|786153|dbj|BAA08831.1| ribosomal protein L3 [Bacillus subtilis]
Length = 162
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 74/166 (44%), Positives = 102/166 (61%), Gaps = 4/166 (2%)
Query: 48 AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQ 107
A+Q+G + + K +KP +G + +PK+ + E R + D VG F+ G+
Sbjct: 1 AIQLGFDDKREKLSNKPEKGHVAKAETAPKRFVKELRGVEMDA-YEVGQEVKVEIFSAGE 59
Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167
+VDVTG++ GKGF GA+KRH +HG S HR GS G DP RVFK K + GRM
Sbjct: 60 IVDVTGVSKGKGFQGAIKRHGQSRGPMSHG-SRYHRRPGSMGPV-DPNRVFKGKLLPGRM 117
Query: 168 GGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
GG ++TV+NLE+V VD +R L+L+KG VPGAKK S I V+ + KS
Sbjct: 118 GGEQITVQNLEIVKVDAERNLLLIKGNVPGAKK-SLITVKSAVKSK 162
>gi|70924866|ref|XP_735214.1| 50S ribosomal protein L3 [Plasmodium chabaudi chabaudi]
gi|56508675|emb|CAH83308.1| 50S ribosomal protein L3, putative [Plasmodium chabaudi chabaudi]
Length = 237
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 73/216 (33%), Positives = 114/216 (52%), Gaps = 4/216 (1%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+G++ K+G +++I G + VTV+ +DNC V+ + + KNGY A++VG G V
Sbjct: 11 RTGLLGYKVGCMSIWDIWGVKHAVTVVKIDNCYVLNQKNITKNGYEALEVGIGNMNVIKQ 70
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
SK G + + K+ EF+ D LPV FS +F+ GQ + ++ KGF
Sbjct: 71 SKNNIGNYIKRRLGFIHKIREFKCTS-DCFLPVQHKFSARHFSPGQNLFISSSIKNKGFC 129
Query: 122 GAMKRHNFGGLRATHGV-SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR-VTVKNLEV 179
GAM++ NF G +HG S +HRS GS + VF+NKKM +G V N ++
Sbjct: 130 GAMQKWNFSGKNQSHGTESKAHRSLGSVSMGKTINIVFRNKKMNTHIGEKSLVKCSNNKL 189
Query: 180 VSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
++ + L+ +KG + G KN I + D+ A N
Sbjct: 190 FRINSLKNLLFIKGTI-GGYKNKIIKISDAKGRAFN 224
>gi|221485858|gb|EEE24128.1| 50S ribosomal protein L3, putative [Toxoplasma gondii GT1]
Length = 394
Score = 138 bits (349), Expect = 4e-31, Method: Composition-based stats.
Identities = 59/202 (29%), Positives = 90/202 (44%), Gaps = 6/202 (2%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ARK+ MT ++ +G+ PVT+L + +V G V + V +P
Sbjct: 146 LLARKIDMTACFSPDGQAEPVTLLQVLPATIVQFLEY---GKAVVSYDLPRRRRLFVKRP 202
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
G V + + ++ +G + S + V V + GKGF G +
Sbjct: 203 TLGKLQRVGATGFETATVTVRPPNE--FVLGQILDVSSLLGAKRVHVRAVKKGKGFQGTV 260
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
R F THG S HR GS G DPGRV +MAGR TV+NL V+ +
Sbjct: 261 SRFGFHRGPMTHG-STHHRGPGSVGAGTDPGRVLPGTRMAGRDKAKVATVRNLRVLGFNP 319
Query: 185 KRGLILVKGCVPGAKKNSWILV 206
K+ L++V+G VPG + + V
Sbjct: 320 KQNLLIVRGSVPGWDMRTVVRV 341
>gi|221503775|gb|EEE29459.1| 50S ribosomal protein L3, putative [Toxoplasma gondii VEG]
Length = 383
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 59/202 (29%), Positives = 90/202 (44%), Gaps = 6/202 (2%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ARK+ MT ++ +G+ PVT+L + +V G V + V +P
Sbjct: 135 LLARKIDMTACFSPDGQAEPVTLLQVLPATIVQFLEY---GKAVVSYDLPRRRRLFVKRP 191
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
G V + + ++ +G + S + V V + GKGF G +
Sbjct: 192 TLGKLQRVGATGFETATVTVRPPNE--FVLGQILDVSSLLGAKRVHVRAVKKGKGFQGTV 249
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
R F THG S HR GS G DPGRV +MAGR TV+NL V+ +
Sbjct: 250 SRFGFHRGPMTHG-STHHRGPGSVGAGTDPGRVLPGTRMAGRDKAKVATVRNLRVLGFNP 308
Query: 185 KRGLILVKGCVPGAKKNSWILV 206
K+ L++V+G VPG + + V
Sbjct: 309 KQNLLIVRGSVPGWDMRTVVRV 330
>gi|237835099|ref|XP_002366847.1| 50S ribosomal protein L3, putative [Toxoplasma gondii ME49]
gi|211964511|gb|EEA99706.1| 50S ribosomal protein L3, putative [Toxoplasma gondii ME49]
Length = 377
Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats.
Identities = 59/202 (29%), Positives = 90/202 (44%), Gaps = 6/202 (2%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++ARK+ MT ++ +G+ PVT+L + +V G V + V +P
Sbjct: 129 LLARKIDMTACFSPDGQAEPVTLLQVLPATIVQFLEY---GKAVVSYDLPRRRRLFVKRP 185
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
G V + + ++ +G + S + V V + GKGF G +
Sbjct: 186 TLGKLQRVGATGFETATVTVRPPNE--FVLGQILDVSSLLGAKRVHVRAVKKGKGFQGTV 243
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
R F THG S HR GS G DPGRV +MAGR TV+NL V+ +
Sbjct: 244 SRFGFHRGPMTHG-STHHRGPGSVGAGTDPGRVLPGTRMAGRDKAKVATVRNLRVLGFNP 302
Query: 185 KRGLILVKGCVPGAKKNSWILV 206
K+ L++V+G VPG + + V
Sbjct: 303 KQNLLIVRGSVPGWDMRTVVRV 324
>gi|297581436|ref|ZP_06943359.1| ribosomal protein L3 [Vibrio cholerae RC385]
gi|297534274|gb|EFH73112.1| ribosomal protein L3 [Vibrio cholerae RC385]
Length = 124
Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats.
Identities = 63/123 (51%), Positives = 81/123 (65%), Gaps = 1/123 (0%)
Query: 90 DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTG 149
+ VGS + F + VDVTG + GKGF GA+KR NF THG S+SHR+ GS G
Sbjct: 3 EEFAVGSELTVELFNEVKKVDVTGTSKGKGFQGAVKRWNFRTQDMTHGNSLSHRAPGSIG 62
Query: 150 CRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
Q PGRVFK KKMAG MG RVT +NLE+V VD +R L+L+KG VPGA + ++V+ +
Sbjct: 63 QCQTPGRVFKGKKMAGHMGAERVTTQNLEIVRVDAERNLLLIKGAVPGATGGN-VIVKPA 121
Query: 210 FKS 212
K+
Sbjct: 122 VKA 124
>gi|296005215|ref|XP_002808939.1| organelle ribosomal protein L3 precursor, putative [Plasmodium
falciparum 3D7]
gi|225631825|emb|CAX64220.1| organelle ribosomal protein L3 precursor, putative [Plasmodium
falciparum 3D7]
Length = 317
Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats.
Identities = 64/209 (30%), Positives = 103/209 (49%), Gaps = 7/209 (3%)
Query: 7 ARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
RK+ M +++ +G IP T++ + + +R LD G + + G + + + KP
Sbjct: 99 GRKIEMKSIFSPQGDLIPATLIEIMPNVI--YRFLD-FGKVGIAYGKPLDESRWILKPEI 155
Query: 67 GFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKR 126
G + V + K +G + SY + V+V G++ GKGF G +KR
Sbjct: 156 GQIAKVGCNLKNTCSLTLTPP--QNFVLGQIIDVSYLYNYKYVNVRGLSKGKGFCGVIKR 213
Query: 127 HNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKR 186
F +HG S HR GS G GRV K KKM G+ G T+ NL+++ ++ +R
Sbjct: 214 WGFKRGPMSHGSSH-HRKPGSIGASTHIGRVLKGKKMPGKHGNKYRTMINLKLLGLNLER 272
Query: 187 GLILVKGCVPGAKKNSWILVRDSFKSAVN 215
ILV GC+PG +NS++ V + + VN
Sbjct: 273 NEILVSGCIPG-NRNSYVTVTATRDNKVN 300
>gi|170596208|ref|XP_001902682.1| Mitochondrial 39S ribosomal protein L3 [Brugia malayi]
gi|158589507|gb|EDP28470.1| Mitochondrial 39S ribosomal protein L3, putative [Brugia malayi]
Length = 424
Score = 137 bits (346), Expect = 9e-31, Method: Composition-based stats.
Identities = 65/236 (27%), Positives = 103/236 (43%), Gaps = 32/236 (13%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN-------------GYMA 48
R G++ARK+GM + ++G R T+L V+ + Y A
Sbjct: 111 RIGMLARKIGMFPQWAVDGTRFLCTLLEFPKNLVISAIDPETYYRISMVGRRKAYGRYGA 170
Query: 49 V---QVGAGEAKVKNVSKPMRGFFSSVNVS-------------PKKKLFEFRVQKDDDLL 92
VGA + + R F V+ P KK + +D ++
Sbjct: 171 RWRVTVGAVDGDPTKFTARYRATFERHGVNFVAVFIFLILSGFPVKKHIASFLVTEDAVV 230
Query: 93 PVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152
G+ +F VGQ + +TG TI GF G M R F G+ A G + SHR G+ G +
Sbjct: 231 QPGTELHVCHFKVGQYITITGHTIDWGFQGGMHRWGFKGMPA-RGTTKSHRRIGAIGSKG 289
Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRD 208
D RV K+M G MG ++ LEV+ ++ ++ ++ V G VPG + +L++D
Sbjct: 290 DA-RVRPGKRMPGHMGYEWRSIPGLEVLRINPEKQVMYVNGSVPG-ETGEILLIKD 343
>gi|323354876|gb|EGA86709.1| Mrpl9p [Saccharomyces cerevisiae VL3]
Length = 148
Score = 137 bits (346), Expect = 9e-31, Method: Composition-based stats.
Identities = 73/149 (48%), Positives = 101/149 (67%), Gaps = 1/149 (0%)
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
M G F+S V+PK+ + EFRV+ + L+P G++ PS+F GQ VDV ++ GKGF+G M
Sbjct: 1 MLGHFASKVVNPKEXVAEFRVKDEKGLIPPGTLLKPSFFKEGQYVDVRSVSKGKGFTGVM 60
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR+ F GLRA+HG SI HR GS G QDPGRV +KM G MG VT++N++V+ VDD
Sbjct: 61 KRYGFKGLRASHGTSIMHRHGGSYGQNQDPGRVLPGRKMPGHMGNEHVTIQNVKVLKVDD 120
Query: 185 KRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+ +I VKG V G KNS++ ++D+ K
Sbjct: 121 ENNVIWVKGSVAGP-KNSFVKIQDAIKKT 148
>gi|290462065|gb|ADD24080.1| 39S ribosomal protein L3, mitochondrial [Lepeophtheirus salmonis]
Length = 351
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 70/242 (28%), Positives = 114/242 (47%), Gaps = 29/242 (11%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG--------- 52
RSG++A+K+G+ ++ G RI T+L + + VV + ++ Y + VG
Sbjct: 78 RSGIIAQKIGLAPLWTKSGVRIMSTLLQVKDNHVVRYIPAEE--YASTHVGEKIKAPKGI 135
Query: 53 --------------AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVF 98
A +K G F+ VSPK+ L F V + +L G+
Sbjct: 136 TDTPRGLNPVLVVGADSRDPSTFTKGYCGLFNGSGVSPKRILSRFIVSPNA-ILKPGTPL 194
Query: 99 SPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRAT-HGVSISHRSHGSTGCRQDPGRV 157
S+F VG VDV G I +GF G MKR F G+ + G + +HR GS G RV
Sbjct: 195 YASHFQVGAYVDVRGTGIRRGFQGVMKRWGFHGMPSDNRGATKTHRRPGSIGSGCQKSRV 254
Query: 158 FKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGC-VPGAKKNSWILVRDSFKSAVNC 216
+ +K+ G MGGN++ + L+++ ++ K G++ V G +PG ++ V D+ +
Sbjct: 255 WPGQKLPGLMGGNKMIMPALQILRINHKEGVLYVTGQGIPG-NTGDFVQVFDTRHPVKSL 313
Query: 217 KG 218
K
Sbjct: 314 KE 315
>gi|148927108|ref|ZP_01810738.1| ribosomal protein L3 [candidate division TM7 genomosp. GTL1]
gi|147887427|gb|EDK72871.1| ribosomal protein L3 [candidate division TM7 genomosp. GTL1]
Length = 180
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 74/180 (41%), Positives = 99/180 (55%), Gaps = 5/180 (2%)
Query: 26 TVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRV 85
T++ C V +T DK+GY AVQ+G GE K +S + G + V+PK
Sbjct: 2 TLVQAGPCAVTQVKTADKDGYNAVQIGYGEGKN--LSNAVAGHVKAAKVTPKVIREIR-- 57
Query: 86 QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSH 145
+ D + VG F VG VDVTG + GKGF+G +KRHNF + THG + R
Sbjct: 58 VNELDEIKVGDQLGVDLFIVGDNVDVTGTSKGKGFAGTVKRHNFNTSKKTHGGNGYVRKV 117
Query: 146 GSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWIL 205
GS G P ++FK K+MAGRMG VTVKNL V +D + LI +KG VPG +K ++
Sbjct: 118 GSIG-SMYPQKIFKGKRMAGRMGHETVTVKNLSVAYIDAESNLIGLKGAVPGPRKGIVVI 176
>gi|326505122|dbj|BAK02948.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 403
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 66/225 (29%), Positives = 106/225 (47%), Gaps = 20/225 (8%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLD---------------KNG- 45
R G++A KLG + +G+++ +T+L + + V+ + + K G
Sbjct: 115 RIGLIAVKLGSIPQWTNDGKKVYLTMLQVLDNHVIDYVPPEVIMSKSNNSVLKSRTKEGR 174
Query: 46 YMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTV 105
VGA + + + F + V PK+KL +F + + + G+ S+F V
Sbjct: 175 LGMAIVGALSSDPRLYTPSYLKLFENSGVPPKRKLTKFMITPNAA-VQPGTPLFASHFRV 233
Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165
G VDV TIG GF G MKR F G +HG + HR G+ G +D + K KMAG
Sbjct: 234 GDYVDVGAKTIGYGFQGVMKRWGFKGGPRSHGATKFHRKRGTIGSGRD-RKPIKGMKMAG 292
Query: 166 RMGGNRVTVKNLEVVSVDDKRGLILVKGCV-PGAKKNSWILVRDS 209
MG L+V +++K ++ V+G V PG + ++ V DS
Sbjct: 293 HMGCKWRIQFGLKVWRINNKYNILYVQGPVIPGP-THCYVRVVDS 336
>gi|330903578|gb|EGH34150.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. japonica str.
M301072PT]
Length = 139
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 71/141 (50%), Positives = 90/141 (63%), Gaps = 3/141 (2%)
Query: 69 FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128
F+ NV+ + + EFR+++ D G F GQLVDVTG + GKGF G +KR N
Sbjct: 1 FAKANVAAGRTVMEFRLEEGD--YQAGDQIKAEIFAAGQLVDVTGQSKGKGFQGTIKRWN 58
Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL 188
F G THG S+SHR GS G Q PGRVFK KKM+G MG RVTV++LEVV VD +R L
Sbjct: 59 FRGQDNTHGNSVSHRVPGSIGQCQTPGRVFKGKKMSGHMGAERVTVQSLEVVRVDAERNL 118
Query: 189 ILVKGCVPGAKKNSWILVRDS 209
+LVKG VPGA + + +R +
Sbjct: 119 LLVKGAVPGATGGNLV-LRPA 138
>gi|56753667|gb|AAW25036.1| SJCHGC01793 protein [Schistosoma japonicum]
Length = 391
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 58/235 (24%), Positives = 103/235 (43%), Gaps = 30/235 (12%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTL-DKNGYMA-----VQVGAGE 55
R G++A KLG+ ++ G ++ TV + + + + + + Y++ +
Sbjct: 94 RCGLIAIKLGVYPLWTKTGEKMDCTVFQVPDNHALRYTPPSEIDKYISLLHPRHYWLNSK 153
Query: 56 AKVKNVSKPMRG--------------------FFSSVNVSPKKKLFEFRVQKDDDLLPVG 95
+++ G + V PK+K+ F V D L G
Sbjct: 154 RPPSWITQKRWGIQLVGAFSADLLNSLLNGVAYLKEAGVPPKRKISRFLVSPDAA-LKPG 212
Query: 96 SVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155
+ S +F VG +D+T TI +GF G ++R G A HG + HR GS P
Sbjct: 213 TPLSVHHFRVGDYLDITARTINRGFQGVIERWGMKGGPAAHGSTKFHRRMGSAAGCGGP- 271
Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
+ + K+M G MG +++ + +V ++ K GLI V G PG +++ L+ DS+
Sbjct: 272 -IARGKRMPGVMGNRFRSLRGVMIVRINPKLGLIYVPGATPGPV-HAYCLLHDSW 324
>gi|156097364|ref|XP_001614715.1| 50S ribosomal protein L3 [Plasmodium vivax SaI-1]
gi|148803589|gb|EDL44988.1| 50S ribosomal protein L3, putative [Plasmodium vivax]
Length = 316
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 63/208 (30%), Positives = 102/208 (49%), Gaps = 7/208 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R + +K+ M +++ G+ IP T++ + + +R LD G + + G + + +
Sbjct: 93 RIQIRGKKIEMRSIFSPNGKLIPATLIEIMPNVI--YRFLD-FGKVGIAYGKPLEESRWI 149
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
KP G + V + K +G + SY + V+V G++ GKGF
Sbjct: 150 LKPEIGQIAKVGCNYKNTCSLTLTPP--QNFVLGQIIDVSYLYNYKYVNVRGLSKGKGFC 207
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR F THG S HR GS G GRV K KKM G+ G T+ NL+++
Sbjct: 208 GVIKRWGFRRGPMTHGSSH-HRKPGSIGASTHIGRVLKGKKMPGKHGNKYNTMINLKLLG 266
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDS 209
++ +R ILV GC+PG +NS++ V +
Sbjct: 267 LNLERNEILVSGCIPG-NRNSYVTVTAT 293
>gi|330722458|gb|EGH00293.1| LSU ribosomal protein L3p (L3e) [gamma proteobacterium IMCC2047]
Length = 141
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 68/127 (53%), Positives = 83/127 (65%), Gaps = 1/127 (0%)
Query: 86 QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSH 145
+ D + + VG + F GQ VDVTG + GKGF+G +KR NF ATHG SISHR+
Sbjct: 14 EADLEGVNVGDELTVERFEAGQKVDVTGQSKGKGFAGGVKRWNFKMQDATHGNSISHRAP 73
Query: 146 GSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWIL 205
GS G Q PGRVFK KKMAG MG +VT + LE+V VD +R LILVKG VPGA +L
Sbjct: 74 GSIGQCQTPGRVFKGKKMAGHMGAAQVTTQGLEIVRVDAERNLILVKGAVPGAP-GGDVL 132
Query: 206 VRDSFKS 212
VR + K+
Sbjct: 133 VRPTVKA 139
>gi|82753677|ref|XP_727774.1| ribosomal protein L3 [Plasmodium yoelii yoelii str. 17XNL]
gi|23483784|gb|EAA19339.1| ribosomal protein L3, putative [Plasmodium yoelii yoelii]
Length = 315
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 66/214 (30%), Positives = 106/214 (49%), Gaps = 7/214 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R + +K+ M +++ G+ IP T++ + + +R LD G + + G + + +
Sbjct: 92 RIQIRGKKIEMRSIFSPNGKLIPATLIKIMPNII--YRFLD-FGKVGIAYGKPLNESRWI 148
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
KP G S +N + K +G + SY + V+V G++ GKGFS
Sbjct: 149 LKPEIGQISKINSNLKNTCSLTLTPP--QNFVLGQIIDVSYLYNYKYVNVRGLSKGKGFS 206
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR F THG S HR GS G GRV K KKM G+ G T+ NL+++
Sbjct: 207 GVIKRWGFHRGPMTHG-SGHHRKPGSIGASTHIGRVLKGKKMPGKDGNKYRTMINLKLLG 265
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
++ +R ILV GC+PG +NS + V + + +N
Sbjct: 266 LNLERNEILVSGCIPG-NRNSDVTVTATRDNKIN 298
>gi|238601104|ref|XP_002395321.1| hypothetical protein MPER_04643 [Moniliophthora perniciosa FA553]
gi|215465855|gb|EEB96251.1| hypothetical protein MPER_04643 [Moniliophthora perniciosa FA553]
Length = 259
Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 85/204 (41%), Positives = 112/204 (54%), Gaps = 24/204 (11%)
Query: 29 HLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKD 88
+ V + + Y AVQV A + K ++ MRG F V K+ + EF +
Sbjct: 5 QVTANIVTARKNASE--YHAVQVAASDRPFKTTTQQMRGHFRKAQVPCKRVVREFPITP- 61
Query: 89 DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGST 148
D +PVG+ S +F GQ VDV +IGKGF+G MKR F GLRA+HGVSISHRS G+T
Sbjct: 62 DAHVPVGTTLSAIHFVPGQFVDVIAKSIGKGFAGGMKRWGFKGLRASHGVSISHRSIGAT 121
Query: 149 GCRQ--------------------DPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL 188
G Q +PGRV+ KKM GR+GG R+T +NL VV VD + L
Sbjct: 122 GAHQVLYQKDIFVAYLIDKASVSRNPGRVWPGKKMPGRLGGERITTQNLAVVRVDSELNL 181
Query: 189 ILVKGCVPGAKKNSWILVRDSFKS 212
I VKG VPG +S ++V+D+ K
Sbjct: 182 IYVKGAVPGVD-DSHVMVKDAKKK 204
>gi|260798664|ref|XP_002594320.1| hypothetical protein BRAFLDRAFT_201187 [Branchiostoma floridae]
gi|229279553|gb|EEN50331.1| hypothetical protein BRAFLDRAFT_201187 [Branchiostoma floridae]
Length = 242
Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 57/188 (30%), Positives = 90/188 (47%), Gaps = 8/188 (4%)
Query: 28 LHLDNCQVVVHRTLDKN-----GYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFE 82
+ + +C V+ + ++ + + +G +S+ F + PK+K+ E
Sbjct: 1 VQVQDCHVIRYIPVEDSDDPDKKQGMLTLGHRSCSPFYLSEEYLRMFEKAGIPPKRKIAE 60
Query: 83 FRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISH 142
F+V D + G+ ++F GQ VDV G TI KGF G MKRH F G A+HG + +H
Sbjct: 61 FKVSMDAA-IKPGTPLYAAHFRPGQYVDVYGKTIDKGFQGVMKRHGFKGQPASHGQTKTH 119
Query: 143 RSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNS 202
R G+ G RV K+ G MG + L++ V+ K ++ V G VPG +
Sbjct: 120 RRPGAIGTAGHG-RVLPGTKLPGPMGNVVRYTRGLKIWRVNTKHNILYVNGQVPG-HNDG 177
Query: 203 WILVRDSF 210
W+ V DS
Sbjct: 178 WVKVYDSI 185
>gi|152940799|gb|ABS44864.1| putative 50S ribosomal protein L3 [Oryza sativa Japonica Group]
Length = 188
Score = 135 bits (339), Expect = 6e-30, Method: Composition-based stats.
Identities = 68/180 (37%), Positives = 98/180 (54%), Gaps = 2/180 (1%)
Query: 31 DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDD 90
V +T +GY AVQVG + + +++P G P + L EFR+Q D
Sbjct: 2 GGNVVTQVKTAATDGYDAVQVGYHGVREEKLTRPELGHLGKAGAPPLRHLQEFRLQSVDG 61
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
P + F G LVD++G +IGKGF G +KRHNF THG S SHR+ GS G
Sbjct: 62 YDPGQPLDFADMFKEGDLVDISGKSIGKGFQGGIKRHNFKRGLMTHG-SKSHRALGSIGA 120
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
PGRV+K KKM GRMGG + ++ L++V +D+ ++++KG VPG N + + +
Sbjct: 121 GTTPGRVYKGKKMPGRMGGTKTKIRKLKIVKIDNDLKVVMIKGAVPGKPGN-LLRIAPAK 179
>gi|2500228|sp|P72233|RL3_PLARO RecName: Full=50S ribosomal protein L3
gi|1679861|emb|CAA67347.1| ribosomal protein L3 [Planobispora rosea]
Length = 140
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 57/136 (41%), Positives = 80/136 (58%), Gaps = 1/136 (0%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
GV+ +KLGMT V++ + R +PVTV+ C V RT +K+GY AVQ+G G+ + V+
Sbjct: 6 KGVLGKKLGMTQVFDADNRMVPVTVVEAGPCVVTRVRTPEKDGYSAVQLGFGQIDPRKVN 65
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
KP+ + ++P++ E R D +G F GQ VDVTG + GKGF+G
Sbjct: 66 KPLGDYLRKHEITPRRYFTEIRTD-DASEYTIGQEVLADTFEAGQFVDVTGKSKGKGFAG 124
Query: 123 AMKRHNFGGLRATHGV 138
MKRH FGGL A+HG
Sbjct: 125 VMKRHGFGGLGASHGT 140
>gi|11465422|ref|NP_045187.1| ribosomal protein L3 [Cyanidium caldarium]
gi|42559313|sp|Q9TLT2|RK3_CYACA RecName: Full=50S ribosomal protein L3, chloroplastic
gi|6466325|gb|AAF12907.1|AF022186_29 unknown [Cyanidium caldarium]
Length = 215
Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats.
Identities = 72/206 (34%), Positives = 103/206 (50%), Gaps = 6/206 (2%)
Query: 6 VARKLGMTCVYNIEGRRIPVTVL-HLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
KLGMT + + G +PVT++ C + T N + + G +KP
Sbjct: 9 FGVKLGMTQILDNFGNLVPVTIVSQPKPCVITRVTTS-LNSQQKLIIQIGCYSDFRANKP 67
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
G+F +V + L EF+ K+++ S+ QLV V+ TIGKGF+G
Sbjct: 68 TIGYFKKQSVPNLRYLHEFQTYKNNEYQVGKSLDLKEL--DQQLVQVSAYTIGKGFAGYQ 125
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
K+H F +HG S SHR GS G PGRVF KMAGR+G +R ++KNL V+ VD
Sbjct: 126 KKHKFSRGAMSHG-SKSHRRPGSIGAGTTPGRVFPGVKMAGRLGFSRRSIKNLLVLKVDL 184
Query: 185 KRGLILVKGCVPGAKKN-SWILVRDS 209
L L+KG VPG N + ++ +
Sbjct: 185 TNKLFLLKGSVPGKYGNLLLVSLKKT 210
>gi|48645|emb|CAA32542.1| ribosomal protein L3 [Yersinia pseudotuberculosis]
Length = 129
Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats.
Identities = 63/126 (50%), Positives = 79/126 (62%), Gaps = 1/126 (0%)
Query: 87 KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHG 146
+ G S F + VDVTG + GKGF+G +KR NF ATHG S+SHR G
Sbjct: 5 PEGQEFTAGQEISVEIFADVKKVDVTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPG 64
Query: 147 STGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILV 206
S G Q PG+VFK KKMAG MG RVTV++L+VV VD +R L+LVKG VPGA + I V
Sbjct: 65 SIGQNQTPGKVFKGKKMAGHMGDERVTVQSLDVVRVDAERNLLLVKGAVPGATGGNLI-V 123
Query: 207 RDSFKS 212
+ + K+
Sbjct: 124 KPAVKA 129
>gi|70943067|ref|XP_741624.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56520122|emb|CAH76721.1| large ribosomal subunit protein L3, prokaryotic (50S)-like,
putative [Plasmodium chabaudi chabaudi]
Length = 223
Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats.
Identities = 65/209 (31%), Positives = 104/209 (49%), Gaps = 7/209 (3%)
Query: 7 ARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+K+ M +++ G+ IP T++ + + +R LD G + + G + + + KP
Sbjct: 5 GKKIEMRSIFSPNGKLIPATLIKIMPNII--YRFLD-FGKVGIAYGKPLNESRWILKPEI 61
Query: 67 GFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKR 126
G S +N + K +G + SY + V+V G++ GKGFSG +KR
Sbjct: 62 GQISKINSNLKNTCSLTLTPP--QNFVLGQIIDVSYLYNYKYVNVRGLSKGKGFSGVIKR 119
Query: 127 HNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKR 186
F THG S HR GS G GRV K KKM G+ G T+ NL+++ ++ +R
Sbjct: 120 WGFRRGPMTHG-SGHHRKPGSIGASTHIGRVLKGKKMPGKDGNKFRTMINLKLLGLNLER 178
Query: 187 GLILVKGCVPGAKKNSWILVRDSFKSAVN 215
ILV GC+PG +NS + V + + +N
Sbjct: 179 NEILVSGCIPG-NRNSDVTVTATRDNKIN 206
>gi|77414571|ref|ZP_00790714.1| ribosomal protein L3 [Streptococcus agalactiae 515]
gi|77159369|gb|EAO70537.1| ribosomal protein L3 [Streptococcus agalactiae 515]
Length = 164
Score = 131 bits (330), Expect = 7e-29, Method: Composition-based stats.
Identities = 78/170 (45%), Positives = 105/170 (61%), Gaps = 6/170 (3%)
Query: 45 GYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFT 104
GY AVQVG + + +KP +G + N +PK+ + EF+ + L VG+ S F
Sbjct: 1 GYEAVQVGFDDKREVLSNKPAKGHVAKANTAPKRFIREFKNIEG---LEVGAELSVEQFE 57
Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
G +VDVTG + GKGF G +KRH HG S HR GS G P RVFKNK++A
Sbjct: 58 AGDVVDVTGTSKGKGFQGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLA 115
Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
GRMGGNRVTV+NLE+V V ++ ++L+KG VPGAKK S I ++ + K+A
Sbjct: 116 GRMGGNRVTVQNLEIVQVIPEKNVVLIKGNVPGAKK-SLITIKSAVKAAK 164
>gi|30468182|ref|NP_849069.1| ribosomal protein L3 [Cyanidioschyzon merolae strain 10D]
gi|30409282|dbj|BAC76231.1| 50S ribosomal protein L3 [Cyanidioschyzon merolae strain 10D]
Length = 203
Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats.
Identities = 65/197 (32%), Positives = 99/197 (50%), Gaps = 26/197 (13%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++A K+GM+ +++ +G +PVT + +V+ HRT +K+GY A+ V +
Sbjct: 28 LLATKIGMSQLFDEKGNALPVTWVKSGVHEVIDHRTPEKHGYTALVVRY---------QH 78
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
F ++S + + F +GQ V V TIGKGF+G
Sbjct: 79 WIREFRVKHLSAYPIGRRLDLS--------------TCFQIGQKVSVKAKTIGKGFAGYQ 124
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KRH+F +HG S +HR GS G PGRVF +MAGR+GGN T+K LE++ +
Sbjct: 125 KRHHFARGPMSHG-SKNHRQPGSIGAGTFPGRVFPGTRMAGRLGGNFCTIKGLEILQI-- 181
Query: 185 KRGLILVKGCVPGAKKN 201
+ + +KG VPG N
Sbjct: 182 QNDQMALKGAVPGKVGN 198
>gi|149928568|ref|ZP_01916792.1| ribosomal protein L3 [Limnobacter sp. MED105]
gi|149822709|gb|EDM81972.1| ribosomal protein L3 [Limnobacter sp. MED105]
Length = 126
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 67/124 (54%), Positives = 86/124 (69%), Gaps = 1/124 (0%)
Query: 90 DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTG 149
L VG+ S F GQ VDV+G+T GKGFSGA+KRH+F RA+HG SISH + GS G
Sbjct: 3 AELQVGAAVSAEIFAPGQKVDVSGVTQGKGFSGAIKRHHFSSQRASHGNSISHNAPGSIG 62
Query: 150 CRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
QDPGRVF K+MAG++G T +NLEVV VD +RGL+L+KG VPG+ K +LV+ +
Sbjct: 63 MAQDPGRVFPGKRMAGQLGNVNRTTQNLEVVRVDAERGLLLIKGAVPGS-KGGQLLVKPA 121
Query: 210 FKSA 213
K+
Sbjct: 122 VKAK 125
>gi|254449764|ref|ZP_05063201.1| ribosomal protein L3 [Octadecabacter antarcticus 238]
gi|198264170|gb|EDY88440.1| ribosomal protein L3 [Octadecabacter antarcticus 238]
Length = 163
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 75/129 (58%), Positives = 96/129 (74%), Gaps = 1/129 (0%)
Query: 87 KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHG 146
+++L+ VG S++ GQ VDV+G +IGKGF+GAMKRHNF GLRATHGVS+SHRSHG
Sbjct: 2 SEENLIAVGEEIIASHYFEGQFVDVSGTSIGKGFAGAMKRHNFSGLRATHGVSVSHRSHG 61
Query: 147 STGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILV 206
STG QDPG+VFK KKMAG MG ++T +NL V+ D RGLI+VKG VPG+ K W+ V
Sbjct: 62 STGQCQDPGKVFKGKKMAGHMGSAKITTQNLVVIKTDLDRGLIMVKGAVPGS-KGGWVTV 120
Query: 207 RDSFKSAVN 215
+D+ K +
Sbjct: 121 KDAVKKPAS 129
>gi|125987858|sp|Q85FW3|RK3_CYAME RecName: Full=50S ribosomal protein L3, chloroplastic
Length = 182
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 65/197 (32%), Positives = 99/197 (50%), Gaps = 26/197 (13%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
++A K+GM+ +++ +G +PVT + +V+ HRT +K+GY A+ V +
Sbjct: 7 LLATKIGMSQLFDEKGNALPVTWVKSGVHEVIDHRTPEKHGYTALVVRY---------QH 57
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
F ++S + + F +GQ V V TIGKGF+G
Sbjct: 58 WIREFRVKHLSAYPIGRRLDLS--------------TCFQIGQKVSVKAKTIGKGFAGYQ 103
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KRH+F +HG S +HR GS G PGRVF +MAGR+GGN T+K LE++ +
Sbjct: 104 KRHHFARGPMSHG-SKNHRQPGSIGAGTFPGRVFPGTRMAGRLGGNFCTIKGLEILQI-- 160
Query: 185 KRGLILVKGCVPGAKKN 201
+ + +KG VPG N
Sbjct: 161 QNDQMALKGAVPGKVGN 177
>gi|328478154|gb|EGF48001.1| 50S ribosomal protein L3 [Lactobacillus rhamnosus MTCC 5462]
Length = 159
Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 59/164 (35%), Positives = 88/164 (53%), Gaps = 5/164 (3%)
Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVD 110
+G G+ + +KP G + +PK+ + E R D VGS F G +VD
Sbjct: 1 MGYGDMREVLTNKPSVGHAKKADTTPKRFVREIRDVALSD-YEVGSEVKADEFAAGDIVD 59
Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170
VTG + G G+ G +K+ HG S HR GS G +VFK KK+ GRMG +
Sbjct: 60 VTGTSKGHGYQGNIKKDGQSRGPMAHG-SRYHRRPGSLGAI--INKVFKGKKLPGRMGNH 116
Query: 171 RVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
T++NL+VV+ D + ++L+KG VPGA K S++ +R + K+A
Sbjct: 117 TRTMQNLQVVAADTEHNVLLIKGNVPGANK-SFVTIRSAVKAAK 159
>gi|68073103|ref|XP_678466.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56498943|emb|CAH95840.1| large ribosomal subunit protein L3, prokaryotic (50S)-like,
putative [Plasmodium berghei]
Length = 221
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 62/199 (31%), Positives = 98/199 (49%), Gaps = 6/199 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R + +K+ M +++ G+ IP T++ + + +R LD G + + G + + +
Sbjct: 29 RIQIRGKKIEMRSIFSPNGKLIPATLIKIMPNII--YRFLD-FGKVGIAYGKPLNESRWI 85
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
KP G S +N + K +G + SY + V+V G++ GKGFS
Sbjct: 86 LKPEIGQISKINSNFKNTCSLTLTPP--QNFVLGQIIDVSYLYNYKYVNVRGLSKGKGFS 143
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR F THG S HR GS G GRV K KKM G+ G T+ NL+++
Sbjct: 144 GVIKRWGFHRGPMTHG-SGHHRKPGSIGASTHVGRVLKGKKMPGKDGNKFRTMINLKLLG 202
Query: 182 VDDKRGLILVKGCVPGAKK 200
++ +R ILV GC+PG +
Sbjct: 203 LNLERNEILVSGCIPGNRN 221
>gi|308801038|ref|XP_003075300.1| putative 50S ribosomal protein L3 (ISS) [Ostreococcus tauri]
gi|116061854|emb|CAL52572.1| putative 50S ribosomal protein L3 (ISS) [Ostreococcus tauri]
Length = 338
Score = 128 bits (321), Expect = 6e-28, Method: Composition-based stats.
Identities = 67/174 (38%), Positives = 90/174 (51%), Gaps = 4/174 (2%)
Query: 38 HRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSV 97
+T +GY AVQVG K + ++KP G + L EFR++ + +
Sbjct: 158 VKTEATDGYNAVQVGYDAVKERQLTKPEAGHCKKAGAPALRHLEEFRLRDAPEYEVGAKI 217
Query: 98 FSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRV 157
F G VDV G +IGKGF GA+KR+ F THG S SHR HGS G +PGR+
Sbjct: 218 NVSELFKEGDKVDVRGRSIGKGFQGAVKRYGFSRGLMTHG-SKSHRQHGSIGSGTNPGRI 276
Query: 158 FKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+ K+M G MG VT+K L V+SV + I+VKG VPG + V + K
Sbjct: 277 YPGKRMHGHMGDEMVTIKGLTVMSV--EDDCIIVKGNVPGKS-GALCKVTPNKK 327
Score = 51.5 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDK 43
G K GMT V+ EG +PVTV+ + + V R +
Sbjct: 37 VGAFGSKAGMTHVFTPEGLCVPVTVIAVREGNVVTQVRDGEN 78
>gi|146332291|gb|ABQ22651.1| mitochondrial 39S ribosomal protein L3-like protein [Callithrix
jacchus]
Length = 173
Score = 128 bits (321), Expect = 7e-28, Method: Composition-based stats.
Identities = 54/128 (42%), Positives = 69/128 (53%), Gaps = 2/128 (1%)
Query: 88 DDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGS 147
D+ L G+ ++F GQ VDVT TIGKGF G MKR F G ATHG + +HR G+
Sbjct: 8 DNAALKPGTPLYAAHFRPGQYVDVTAKTIGKGFQGVMKRWGFKGQPATHGQTKTHRRPGA 67
Query: 148 TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVR 207
D RV+ K+ G+MG TV L+V ++ K +I V G VPG KN + VR
Sbjct: 68 IST-GDVARVWPGTKLPGQMGNIDRTVHGLKVWRINTKHNIIYVNGSVPG-HKNCLVKVR 125
Query: 208 DSFKSAVN 215
DS A
Sbjct: 126 DSKLPAYK 133
>gi|323348471|gb|EGA82716.1| Mrpl9p [Saccharomyces cerevisiae Lalvin QA23]
Length = 164
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 62/125 (49%), Positives = 86/125 (68%), Gaps = 1/125 (0%)
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
L+P G++ PS+F GQ VDV ++ GKGF+G MKR+ F GLRA+HG SI HR GS G
Sbjct: 13 LIPPGTLLKPSFFKEGQYVDVRSVSKGKGFTGVMKRYGFKGLRASHGTSIMHRHGGSYGQ 72
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
QDPGRV +KM G MG VT++N++V+ VDD+ +I VKG V G KNS++ ++D+
Sbjct: 73 NQDPGRVLPGRKMPGHMGNEHVTIQNVKVLKVDDENNVIWVKGSVAGP-KNSFVKIQDAI 131
Query: 211 KSAVN 215
K ++
Sbjct: 132 KKNLS 136
>gi|217073974|gb|ACJ85347.1| unknown [Medicago truncatula]
Length = 224
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 68/167 (40%), Positives = 87/167 (52%), Gaps = 2/167 (1%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
GV+ KLGM + G +PVTV+ + V + +GY AVQVG + + +
Sbjct: 57 VGVMGTKLGMMSFFQPNGEVVPVTVVGFKEGNIVTQIKADATDGYNAVQVGYRRVRDRKL 116
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G P + L EFR+Q D P + F G LVDV+G TIGKGF
Sbjct: 117 TKPEMGHLEKAGAIPMRHLQEFRLQSVDGFEPNQRLVFDELFNEGDLVDVSGTTIGKGFQ 176
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168
G +KRHNF +HG S SHR GS G PGRV+K KKM G+ G
Sbjct: 177 GGIKRHNFKRGPMSHG-SKSHRQLGSIGAGTTPGRVYKGKKMPGKDG 222
>gi|3914749|sp|P94799|RL3_ACTAC RecName: Full=50S ribosomal protein L3
gi|1841322|dbj|BAA10947.1| ribosomal protein L3 [Actinobacillus actinomycetemcomitans]
Length = 121
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 63/122 (51%), Positives = 79/122 (64%), Gaps = 1/122 (0%)
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
+G + F + VDVTG + GKGF G +KR NF ATHG S+SHR GS G
Sbjct: 1 EFTLGQEINVDIFADVKKVDVTGTSKGKGFQGGVKRWNFRTQDATHGNSLSHRVLGSIGQ 60
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
Q PGRVFK KKMAG +G RVTV++LEVV VD +R L+LVKG VPGA S ++V+ +
Sbjct: 61 NQTPGRVFKGKKMAGHLGNERVTVQSLEVVRVDAERKLLLVKGAVPGA-TGSDVIVKPAV 119
Query: 211 KS 212
K+
Sbjct: 120 KA 121
>gi|115749008|ref|XP_001195229.1| PREDICTED: similar to mitochondrial ribosomal protein L3
[Strongylocentrotus purpuratus]
gi|115922520|ref|XP_001179143.1| PREDICTED: similar to mitochondrial ribosomal protein L3
[Strongylocentrotus purpuratus]
Length = 343
Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats.
Identities = 62/211 (29%), Positives = 93/211 (44%), Gaps = 31/211 (14%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNG---YMAVQVGAGEAKV 58
R+GV+A KLGM ++ EG+R+P T+L + C V+ NG V V A A
Sbjct: 114 RAGVIAIKLGMQPLWTKEGKRVPTTLLQVLECNVIDFHPQGLNGSDRPGTVLVAAKNAPP 173
Query: 59 KNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
+ F SV + K+ + F V D+ L G+ ++F G VD+ TI K
Sbjct: 174 YYKDEEYADLFKSVCLPVKEHITSFNVT-DNAALQPGTPLYAAHFRPGMYVDIAAKTIDK 232
Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
GF G MKR G A+HG + +HR G +G
Sbjct: 233 GFQGVMKRWGMKGQPASHGATKTHRKMGGSGGGG-------------------------- 266
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
V+ V+ K ++ VKG + G + ++ V+DS
Sbjct: 267 VLRVNTKHNILYVKGTIHG-RNLGFVKVKDS 296
>gi|156083276|ref|XP_001609122.1| ribosomal protein L3 domain containing protein [Babesia bovis T2Bo]
gi|154796372|gb|EDO05554.1| ribosomal protein L3 domain containing protein [Babesia bovis]
Length = 323
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 60/203 (29%), Positives = 90/203 (44%), Gaps = 9/203 (4%)
Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
+ K+G +++ +G VT L + C + GY V G + + +
Sbjct: 118 IKYKVG--QIWSPDGHVETVTALKVLPCTICEFMDF---GYALVAYGKPSWEKRWNLRSE 172
Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
G + + ++Q D +G + S F V VTG+T GKGF+G +K
Sbjct: 173 LGKLIKNCNN-FAYMKPVKLQPPQD-YVLGQILDVSAFAGCTHVKVTGITKGKGFAGVIK 230
Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
RH F +HG S HR GS G PG V K+M GRMG R T + L V+ ++ +
Sbjct: 231 RHGFARGPMSHG-SKHHRKPGSIGASTTPGCVKPGKRMPGRMGNKRCTFRKLRVLGINPE 289
Query: 186 RGLILVKGCVPGAKKNSWILVRD 208
L+ VK V GA S++ V
Sbjct: 290 TSLMYVKALVAGA-NGSYVSVTS 311
>gi|255644742|gb|ACU22873.1| unknown [Glycine max]
Length = 177
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 58/128 (45%), Positives = 85/128 (66%), Gaps = 1/128 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+G++A K GM+ +++ G RIP+TVL +D+ V +T +K G+ A+Q+G G K K++
Sbjct: 51 RTGLIAVKCGMSALWDKWGARIPITVLWVDDNIVSQIKTPEKEGFCALQIGCGHKKDKHL 110
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
+KP G F + V K+KL EF V + D LLPVG+ + +F GQ VD++G+T GKGF
Sbjct: 111 TKPEVGHFRAQGVPMKRKLREFPVTE-DALLPVGTSLNVRHFVPGQFVDISGITKGKGFQ 169
Query: 122 GAMKRHNF 129
G MKRH F
Sbjct: 170 GVMKRHGF 177
>gi|291533621|emb|CBL06734.1| 50S ribosomal protein L3, bacterial [Megamonas hypermegale ART12/1]
Length = 149
Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 72/152 (47%), Positives = 90/152 (59%), Gaps = 5/152 (3%)
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
M+G F+ V P K + E R+ D G S F G LVDVTG + GKGF+G +
Sbjct: 1 MKGHFAKAGVEPVKFIRELRL-ADVPEYKAGDSISVDIFGAGDLVDVTGTSKGKGFAGGI 59
Query: 125 KRHNFGGLRATHGVSISHRSHGSTG--CRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
KRHNF HG S SHR GSTG GRV K KK+ GRMGG +VTV+ L VV V
Sbjct: 60 KRHNFARGPMGHG-SKSHREPGSTGAMISGHGGRVLKGKKLPGRMGGAKVTVQRLSVVRV 118
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
D R LIL+KG +PGA KNS+++++D+ K
Sbjct: 119 DADRNLILIKGAIPGA-KNSFVVIKDTVKPKK 149
>gi|85000981|ref|XP_955209.1| 50S ribosomal protein L3 [Theileria annulata strain Ankara]
gi|65303355|emb|CAI75733.1| 50S ribosomal protein L3, putative [Theileria annulata]
Length = 328
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 62/229 (27%), Positives = 92/229 (40%), Gaps = 25/229 (10%)
Query: 7 ARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
A K G+ + + +G VT L + C ++ GY V G ++ K ++
Sbjct: 101 AIKHGVGQITSPDGIVETVTALRVLPCTILQFMDF---GYALVSYGTFNKYATSLLKFIK 157
Query: 67 GFFSSVNVSPKKKLFEFRVQKDD--------------------DLLPVGSVFSPSYFTVG 106
F+ P + +G + S F
Sbjct: 158 QIFNENIGKPLWTRHWNNRPELGKLIKISANNAETFPVKLQPPQDYVLGQLVDVSSFVGC 217
Query: 107 QLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGR 166
VTG+T GKGF G +KRH F +HG S HR GS G PG V KKM GR
Sbjct: 218 THAKVTGITKGKGFQGVIKRHGFKRGPMSHG-SKHHRRPGSIGASTTPGCVKPGKKMPGR 276
Query: 167 MGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
MGG R T + L+++ ++ + L+ VKG V G K S++ V + +
Sbjct: 277 MGGKRCTFRKLKILGLNPETSLLYVKGHVAGP-KGSYVTVTSDVQPPLK 324
>gi|255017007|ref|ZP_05289133.1| 50S ribosomal protein L3 [Listeria monocytogenes FSL F2-515]
Length = 122
Score = 121 bits (303), Expect = 8e-26, Method: Composition-based stats.
Identities = 43/123 (34%), Positives = 69/123 (56%), Gaps = 1/123 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ RK+GMT V+ G IPVTV+ V+ +T++ +GY AVQ+G + +
Sbjct: 1 MTKGILGRKVGMTQVFTENGELIPVTVIEAAQNVVLQKKTVETDGYEAVQIGFEDKRAIL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+KP +G + N +PK+ + EFR D+ +G+ F G ++D TG++ GKGF
Sbjct: 61 SNKPEQGHVAKANTTPKRFIREFRDVNLDE-YEIGAEVKVDVFAEGDIIDATGVSKGKGF 119
Query: 121 SGA 123
G
Sbjct: 120 QGV 122
>gi|269866677|ref|XP_002652354.1| LSU ribosomal protein L3P [Enterocytozoon bieneusi H348]
gi|220062674|gb|EED41701.1| LSU ribosomal protein L3P [Enterocytozoon bieneusi H348]
Length = 116
Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 60/117 (51%), Positives = 81/117 (69%), Gaps = 1/117 (0%)
Query: 96 SVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155
F GQ VDV+G++ GKGF+GA+KRHNF RA+HG S+SHR+ GS GCRQ PG
Sbjct: 1 MDIDLDIFAEGQRVDVSGVSKGKGFAGAIKRHNFRSNRASHGNSLSHRAPGSIGCRQTPG 60
Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
RVFK KKMAG +G +VT NLE+V +D R L+++KG VPGA+ +++R + +
Sbjct: 61 RVFKGKKMAGHLGAEQVTTLNLELVRIDANRRLLMIKGAVPGARDGD-VMIRPAVRG 116
>gi|319955856|ref|YP_004167119.1| LSU ribosomal protein l3p [Nitratifractor salsuginis DSM 16511]
gi|319418260|gb|ADV45370.1| LSU ribosomal protein L3P [Nitratifractor salsuginis DSM 16511]
Length = 193
Score = 120 bits (302), Expect = 1e-25, Method: Composition-based stats.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 15/202 (7%)
Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
+ K+GM+ ++ +PVT+L + +V R ++G V +G+ K +
Sbjct: 4 IVEKIGMSRTIDVP--SVPVTLLKVVETKVCEVR---EDGKALVAYNSGKKINKAIEGQQ 58
Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
+ + S + L + D S + Q+V + + G+GFSG MK
Sbjct: 59 KKYSVSNEFNKFMTLEVAEGTEPGD-------LSTAPLAEAQVVKSSFNSKGRGFSGVMK 111
Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
RHNF G HG S HR+ GS G + PGRV +KM G G + TVKN EV+S D +
Sbjct: 112 RHNFAGGPGAHG-SRFHRAPGSIGMCEWPGRVQPGQKMPGHYGNAKTTVKN-EVISFDAE 169
Query: 186 RGLILVKGCVPGAKK-NSWILV 206
G++++KG VPG K + +
Sbjct: 170 NGILVLKGAVPGPKGARGVVRI 191
>gi|227871802|ref|ZP_03990206.1| possible ribosomal protein L3 [Oribacterium sinus F0268]
gi|227842365|gb|EEJ52591.1| possible ribosomal protein L3 [Oribacterium sinus F0268]
Length = 128
Score = 119 bits (298), Expect = 3e-25, Method: Composition-based stats.
Identities = 50/127 (39%), Positives = 69/127 (54%), Gaps = 2/127 (1%)
Query: 86 QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSH 145
++ + V F G VDV+ + GKGF+ A+K++ THG S HR
Sbjct: 4 FENAEEYKVKDEIKADIFAEGDKVDVSATSKGKGFASAIKKYGQHRGPMTHG-SKFHRHQ 62
Query: 146 GSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWIL 205
GS G P RV K M MG +VT +NL VV VD ++GLILVKG VPG KK + +
Sbjct: 63 GSNGTSATPSRVLPGKGMPSHMGAVKVTTQNLTVVKVDAEQGLILVKGAVPGPKK-ALVT 121
Query: 206 VRDSFKS 212
++++ KS
Sbjct: 122 IKEAVKS 128
>gi|293372118|ref|ZP_06618509.1| 50S ribosomal protein L3 [Bacteroides ovatus SD CMC 3f]
gi|292632910|gb|EFF51497.1| 50S ribosomal protein L3 [Bacteroides ovatus SD CMC 3f]
Length = 142
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 60/143 (41%), Positives = 82/143 (57%), Gaps = 4/143 (2%)
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
M G F V+PK+ L EF ++ + L +G + F VDV G + GKGF G +
Sbjct: 1 MMGHFKRAGVTPKRHLAEF--KEFETELNLGDTITVEMFNDASFVDVVGTSKGKGFQGVV 58
Query: 125 KRHNFG-GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
KRH FG +ATHG R GS G P +VFK +M G++GG+RVTV+NL+V+ V
Sbjct: 59 KRHGFGGVGQATHGQHNRARKPGSIGACSYPAKVFKGMRMGGQLGGDRVTVQNLQVLKVI 118
Query: 184 DKRGLILVKGCVPGAKKNSWILV 206
L+LVKG +PG K S +L+
Sbjct: 119 ADHNLLLVKGSIPGC-KGSIVLI 140
>gi|288931510|ref|YP_003435570.1| ribosomal protein L3 [Ferroglobus placidus DSM 10642]
gi|288893758|gb|ADC65295.1| ribosomal protein L3 [Ferroglobus placidus DSM 10642]
Length = 329
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 62/273 (22%), Positives = 87/273 (31%), Gaps = 65/273 (23%)
Query: 4 GVVARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53
G K GMT V I+ R+ +PVTVL +V+ R K Y G
Sbjct: 39 GFAGYKAGMTHVIMIDDRKNSPTYGEEIMVPVTVLETPPMKVMGIRVYRKTVYGLQIAGE 98
Query: 54 GEAKVKNVSKPMRGFFSSV--------------------NVSPKKKLFEFRVQKDDDLLP 93
+ R P + D
Sbjct: 99 VWTDEVDSYLSRRLQIPKKKGDVDKLKEIDDIAEVRVITYTQPYLITGVPKKVPDVMEQK 158
Query: 94 VGSVFSP----------------SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHG 137
VG F G +DV +T GKGF G +KR L A H
Sbjct: 159 VGGDVEAALNYAIEKLGKEVRVNEVFKEGAFIDVLSITKGKGFQGPVKRWGVITLDAKHA 218
Query: 138 VSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS-------VDDKRGLI- 189
S HR G+ G P RV AG+MG ++ T N ++ ++ + G +
Sbjct: 219 RSSKHRRVGTLGP-WHPHRVRWTVPQAGQMGFHQRTEYNKRILKIGTNGEDINPEGGFLH 277
Query: 190 ---------LVKGCVPGAKKNSWILVRDSFKSA 213
LV G VPG+ K + +RD+ +
Sbjct: 278 YGLVRSDYVLVSGSVPGSVKR-LVRMRDAIRPP 309
>gi|152989972|ref|YP_001355694.1| 50S ribosomal protein L3 [Nitratiruptor sp. SB155-2]
gi|151421833|dbj|BAF69337.1| 50S ribosomal protein L3 [Nitratiruptor sp. SB155-2]
Length = 192
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 56/196 (28%), Positives = 96/196 (48%), Gaps = 17/196 (8%)
Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
+ K+GM+ ++ +PVT+L + +V + G V G+ + +K +
Sbjct: 4 IVEKIGMSRTISVP--SVPVTLLKVKEAKVCELL---EGGKAIVAYSQGKKR----NKAI 54
Query: 66 RGFFSSVNVSP-KKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
G +SP + + +V + + + + + + + G+GFSG +
Sbjct: 55 EGQQKKYGLSPEFNRFIKLKVTNTEAG-----DLDVTPLSEAKRIKTSFNSKGRGFSGVV 109
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR NFGG +HG S HR+ GS G + PGR+ +KM G+ G +VTV+N EVVS D
Sbjct: 110 KRWNFGGGPDSHG-SRFHRAPGSVGMCEWPGRIMPGQKMPGQYGNKKVTVQN-EVVSFDP 167
Query: 185 KRGLILVKGCVPGAKK 200
+ +++VKG +PG
Sbjct: 168 ENMILVVKGSIPGPNG 183
>gi|21702611|gb|AAM76007.1|AF481103_17 ribosomal protein L3 [Candidatus Tremblaya princeps]
Length = 205
Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 67/209 (32%), Positives = 98/209 (46%), Gaps = 9/209 (4%)
Query: 1 MRSGV-VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
M + + K+GMT + + G +PVT+L + + + + V K
Sbjct: 1 MSVSIMLGVKVGMTRISSASGGVVPVTILDVSGNTPLRNACRSSD---ERVVLYRSVHSK 57
Query: 60 NVSKPMRGFFSSVNVSPKKK--LFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
+S+P N+ P +L G + + GQLV + ++G
Sbjct: 58 RLSRPQLCACIGRNMEPAAYSAWTAQHGMAQHGILACGRPHAKAILRAGQLVSIKARSVG 117
Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
KGFSG MKRH F RA+HG S +HR+ GSTG QDPGRVF K+M GRMG T +NL
Sbjct: 118 KGFSGVMKRHGFSSGRASHGTSKAHRTLGSTGMSQDPGRVFPGKRMPGRMGCEHATARNL 177
Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILV 206
V V ++V+G +PG S + +
Sbjct: 178 MVEHV--AHDFVMVRGGIPG-HAGSIVAI 203
>gi|154148794|ref|YP_001405697.1| 50S ribosomal protein L3 [Campylobacter hominis ATCC BAA-381]
gi|153804803|gb|ABS51810.1| ribosomal protein L3 [Campylobacter hominis ATCC BAA-381]
Length = 191
Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats.
Identities = 60/195 (30%), Positives = 91/195 (46%), Gaps = 16/195 (8%)
Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
+ K+GM+ I+ IPVT+L + N ++ +G V G+A K ++
Sbjct: 4 IVEKIGMSR--TIDNPSIPVTLLRVVNAKICEV----NDGKAVVAYANGKAFNKAIAGIQ 57
Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
+ + S + L + D S F + V + + G+G+ G MK
Sbjct: 58 KKYNLSKEFNKFATLCVENAEVGDQ--------SIEIFNNAKFVKSSFTSKGRGYQGVMK 109
Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
RH F G +HG S HR HGS G + PGRV +MAG MG +VTVKN E+V D +
Sbjct: 110 RHGFAGGPKSHG-SRFHRRHGSIGNCEWPGRVQPGMRMAGHMGNVKVTVKN-EIVKFDAE 167
Query: 186 RGLILVKGCVPGAKK 200
++++KG V G
Sbjct: 168 NRILVLKGAVAGFNG 182
>gi|284162460|ref|YP_003401083.1| ribosomal protein L3 [Archaeoglobus profundus DSM 5631]
gi|284012457|gb|ADB58410.1| ribosomal protein L3 [Archaeoglobus profundus DSM 5631]
Length = 332
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 60/281 (21%), Positives = 88/281 (31%), Gaps = 79/281 (28%)
Query: 4 GVVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53
G K GMT V I+ R +PVTVL +V R Y
Sbjct: 40 GFAGYKAGMTHVIMIDDRKNSPTYGEEIVVPVTVLECPPMKVAGIRVYKNTMYGL----- 94
Query: 54 GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVF--------------- 98
+ + + + S PKK + K+ + + +
Sbjct: 95 -QIAKEVWTTELDEHLSRRLPLPKKINTDVESLKNVENIAEVRLITYTQPYLITGVPSKT 153
Query: 99 -----------------------------SPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF 129
F G +DV +T GKGF G +KR
Sbjct: 154 PDVMEYKVGGSDINAVLDYAISKLGKEIRVSEVFQEGAFIDVIAITKGKGFQGPVKRWGV 213
Query: 130 GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV--DDKR- 186
L A H S HR G+ G P RV AG+MG ++ T N ++ + + +
Sbjct: 214 ITLDAKHARSSKHRRVGTLGP-WTPHRVRWTVPQAGQMGFHQRTEYNKRIIKIGENGEEI 272
Query: 187 --------------GLILVKGCVPGAKKNSWILVRDSFKSA 213
+LV G VPG K I +RD+ +
Sbjct: 273 TPEGGFVHYGVIRSDYVLVSGSVPGPVKR-LIRMRDAIRPP 312
>gi|213423716|ref|ZP_03356696.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 101
Score = 115 bits (287), Expect = 6e-24, Method: Composition-based stats.
Identities = 57/102 (55%), Positives = 73/102 (71%), Gaps = 1/102 (0%)
Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170
VTG + GKGF+G +KR NF ATHG S+SHR GS G Q PG+VFK KKMAG+MG
Sbjct: 1 VTGTSKGKGFAGTVKRWNFRTQDATHGNSLSHRVPGSIGQNQTPGKVFKGKKMAGQMGNE 60
Query: 171 RVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
RVTV++L+VV VD +R L+LVKG VPGA ++V+ + K+
Sbjct: 61 RVTVQSLDVVRVDAERNLLLVKGGVPGA-TGCDLIVKPAVKA 101
>gi|268680587|ref|YP_003305018.1| 50S ribosomal protein L3 [Sulfurospirillum deleyianum DSM 6946]
gi|268618618|gb|ACZ12983.1| 50S ribosomal protein L3 [Sulfurospirillum deleyianum DSM 6946]
Length = 192
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 66/193 (34%), Positives = 95/193 (49%), Gaps = 15/193 (7%)
Query: 8 RKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRG 67
K+GM+ + +PVT+L + +V D+N V +G+ ++K + G
Sbjct: 6 EKIGMSRTIAVP--SVPVTLLRVLEAKVCSV---DENKRALVSYVSGKK----MNKAIAG 56
Query: 68 FFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRH 127
N+S R D S + + Q + V+ T G+GF+G +KRH
Sbjct: 57 QQKKYNLSA----AFNRFVTLDVTNTEVGDLSTAPLSEAQRLKVSLNTKGRGFTGVIKRH 112
Query: 128 NFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRG 187
NF G HG S HR+ GS G + PGRV K KKM G G +VTV+N E+VS D + G
Sbjct: 113 NFHGGPGGHG-SRFHRAPGSIGNCEWPGRVQKGKKMPGHYGNTQVTVQN-EIVSFDAENG 170
Query: 188 LILVKGCVPGAKK 200
++ VKG VPGA
Sbjct: 171 ILAVKGSVPGANG 183
>gi|222823103|ref|YP_002574676.1| 50S ribosomal protein L3 [Campylobacter lari RM2100]
gi|222538324|gb|ACM63425.1| 50S ribosomal protein L3 [Campylobacter lari RM2100]
Length = 191
Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 67/205 (32%), Positives = 100/205 (48%), Gaps = 17/205 (8%)
Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
+ K+GM+ + IPVT+L L +V +NG V G+A K ++
Sbjct: 4 IVEKIGMSRTISTP--SIPVTLLKLVQTKVCEV----ENGKALVAYVKGKANNKCIAGQQ 57
Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
+ + S + L + D + ++ V+ + G+G+SG +K
Sbjct: 58 KKYNLSAEYNRFASLEVANTEAGD--------IDLNPLKEASILKVSFNSKGRGYSGVVK 109
Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
RH F G A+HG S HR HGS G R+ PGRV KMAG G +VTVKN EVVS D++
Sbjct: 110 RHGFAGGPASHG-SRFHRRHGSIGNREWPGRVQPGMKMAGHYGNVKVTVKN-EVVSFDEE 167
Query: 186 RGLILVKGCVPGAKKNSWILVRDSF 210
G+++VKG VPG + +R +
Sbjct: 168 NGILVVKGAVPGF-NGAMGKIRIAK 191
>gi|327400872|ref|YP_004341711.1| 50S ribosomal protein L3 [Archaeoglobus veneficus SNP6]
gi|327316380|gb|AEA46996.1| ribosomal protein L3 [Archaeoglobus veneficus SNP6]
Length = 329
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 56/273 (20%), Positives = 90/273 (32%), Gaps = 65/273 (23%)
Query: 4 GVVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG- 52
G K+GMT V ++ R +PVTV+ +V R K Y G
Sbjct: 39 GFAGYKVGMTHVVMVDDRKNSLTYGEEIVVPVTVIETPPMKVAGIRVYRKTPYGMQIAGE 98
Query: 53 ----------------------------AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFR 84
+A V + + + + E +
Sbjct: 99 VWSSDLDNFLGRRLQLPKKSPDVEKLKEIDDAAEVRVITYTQPYLITGIPKKVPDVMEHK 158
Query: 85 VQKDDD-------LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHG 137
V D + ++ G ++DV +T GKGF G +KR L A H
Sbjct: 159 VGGDVSSALDYAIEKLGKEIRVSEVYSEGAIIDVLSITKGKGFQGPVKRWGVITLDAKHA 218
Query: 138 VSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK------------ 185
S HR G G +P + AG+MG ++ T N ++ + +
Sbjct: 219 RSSKHRRVGCLGP-WNPHHIRWTVPQAGQMGFHQRTEFNKRIIKIGEDGSEVTPNGGFPH 277
Query: 186 -----RGLILVKGCVPGAKKNSWILVRDSFKSA 213
+L+ G VPG+ K I +RD+ +
Sbjct: 278 YGVVRSDYVLISGSVPGSVKR-LIRMRDAIRPP 309
>gi|317014710|gb|ADU82146.1| 50S ribosomal protein L3 [Helicobacter pylori Gambia94/24]
Length = 191
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 16/203 (7%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
+ +K+GM+ + PVT+L + +V +NG V + K +
Sbjct: 3 FLVQKIGMSRTIDAN--STPVTLLKVLQAKVCQL----ENGKALVAYAMHKKHNKAIEGQ 56
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+ + S + L + Q+ D S + V + T G+GF+G M
Sbjct: 57 QKKYQLSKEFNHFATLKASQQQELGD-------LDLSALETLKRVKASFKTKGRGFAGVM 109
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR NF G A HG S HR GS G R+ PGRV K +KMAG G VT +N EV+S D
Sbjct: 110 KRWNFQGGPAAHG-SRFHRHPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN-EVLSFDK 167
Query: 185 KRGLILVKGCVPGAKKNSWILVR 207
+ ++++KG V G ++ +R
Sbjct: 168 ESMVLVLKGSVAGFS-GAYGRIR 189
>gi|308185071|ref|YP_003929204.1| 50S ribosomal protein L3 [Helicobacter pylori SJM180]
gi|308060991|gb|ADO02887.1| 50S ribosomal protein L3 [Helicobacter pylori SJM180]
Length = 191
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 16/203 (7%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
+ +K+GM+ + PVT+L + +V +NG V + K +
Sbjct: 3 FLVQKIGMSRTIDAN--STPVTLLKVLQAKVCQL----ENGKALVAYAMHKKYNKAIEGQ 56
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+ + S + L + Q+ D S + V + T G+GF+G M
Sbjct: 57 QKKYQLSKEFNHFATLKASQQQELGD-------LDLSALETLKRVKASFKTKGRGFAGVM 109
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR NF G A HG S HR GS G R+ PGRV K +KMAG G VT +N EV+S D
Sbjct: 110 KRWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN-EVLSFDK 167
Query: 185 KRGLILVKGCVPGAKKNSWILVR 207
+ ++++KG V G ++ +R
Sbjct: 168 ESMVLVLKGSVAGFS-GAYGRIR 189
>gi|217033636|ref|ZP_03439064.1| hypothetical protein HP9810_899g72 [Helicobacter pylori 98-10]
gi|216943982|gb|EEC23416.1| hypothetical protein HP9810_899g72 [Helicobacter pylori 98-10]
gi|261840034|gb|ACX99799.1| 50S ribosomal protein L3 [Helicobacter pylori 52]
gi|307637990|gb|ADN80440.1| LSU ribosomal protein L3p:L3e [Helicobacter pylori 908]
gi|308062604|gb|ADO04492.1| 50S ribosomal protein L3 [Helicobacter pylori Cuz20]
gi|315587208|gb|ADU41589.1| 50S ribosomal protein L3 [Helicobacter pylori 35A]
gi|317013106|gb|ADU83714.1| 50S ribosomal protein L3 [Helicobacter pylori Lithuania75]
gi|317178390|dbj|BAJ56178.1| 50S ribosomal protein L3 [Helicobacter pylori F30]
gi|317181041|dbj|BAJ58827.1| 50S ribosomal protein L3 [Helicobacter pylori F32]
gi|317182565|dbj|BAJ60349.1| 50S ribosomal protein L3 [Helicobacter pylori F57]
gi|325996595|gb|ADZ52000.1| 50S ribosomal protein L3 [Helicobacter pylori 2018]
gi|325998185|gb|ADZ50393.1| 50S ribosomal protein L3 [Helicobacter pylori 2017]
Length = 191
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 16/203 (7%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
+ +K+GM+ + PVT+L + +V +NG V + K +
Sbjct: 3 FLVQKIGMSRTIDAN--STPVTLLKVLQAKVCQL----ENGKALVAYAMHKKHNKAIEGQ 56
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+ + S + L + Q+ D S + V + T G+GF+G M
Sbjct: 57 QKKYQLSKEFNHFATLKASQQQELGD-------LDLSALETLKRVKASFKTKGRGFAGVM 109
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR NF G A HG S HR GS G R+ PGRV K +KMAG G VT +N EV+S D
Sbjct: 110 KRWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN-EVLSFDK 167
Query: 185 KRGLILVKGCVPGAKKNSWILVR 207
+ ++++KG V G ++ +R
Sbjct: 168 ESMVLVLKGSVAGFS-GAYGRIR 189
>gi|109946759|ref|YP_663987.1| 50S ribosomal protein L3 [Helicobacter acinonychis str. Sheeba]
gi|109713980|emb|CAJ98988.1| 50S ribosomal protein L3 [Helicobacter acinonychis str. Sheeba]
gi|317011519|gb|ADU85266.1| 50S ribosomal protein L3 [Helicobacter pylori SouthAfrica7]
Length = 191
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 16/203 (7%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
+ +K+GM+ + PVT+L + +V +NG V + K +
Sbjct: 3 FLVQKIGMSRTIDAN--STPVTLLKVLQAKVCQL----ENGKALVAYAMHKKHNKAIEGQ 56
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+ + S + L + ++ D S + V + T G+GF+G M
Sbjct: 57 QKKYQLSKEFNHFATLKASQQKELGD-------LDLSALETLKRVKASFKTKGRGFAGVM 109
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR NF G A HG S HR GS G R+ PGRV K +KMAG G VT +N EV+S D
Sbjct: 110 KRWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN-EVLSFDK 167
Query: 185 KRGLILVKGCVPGAKKNSWILVR 207
+ ++++KG V G ++ +R
Sbjct: 168 ESMVLVLKGSVAGFS-GAYGRIR 189
>gi|291277268|ref|YP_003517040.1| 50S ribosomal protein L3 [Helicobacter mustelae 12198]
gi|290964462|emb|CBG40312.1| 50S ribosomal protein L3 [Helicobacter mustelae 12198]
Length = 192
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 67/193 (34%), Positives = 93/193 (48%), Gaps = 15/193 (7%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
+ K+GM+ + + I VT+L + + +V Y + AK K +K
Sbjct: 3 FLVEKIGMSRTIDT--KSIAVTLLRVIDAKVCEI-------YENKKALIAYAKGKASNKA 53
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+ G N+S K+ +Q + + S Q + VT T G+GFSGAM
Sbjct: 54 IAGQQKKYNLS-KEFNRFATLQVGNAEVGDLDK---SALENAQRLKVTFKTKGRGFSGAM 109
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR NF G A HG S HR GS G R+ PGRV KKMAG G VT +N EVVS D
Sbjct: 110 KRWNFQGGPAAHG-SRFHRRLGSIGNREWPGRVQPGKKMAGHYGNETVTAQN-EVVSFDK 167
Query: 185 KRGLILVKGCVPG 197
+ ++++KG V G
Sbjct: 168 ESNILVLKGSVAG 180
>gi|57238730|ref|YP_179845.1| 50S ribosomal protein L3 [Campylobacter jejuni RM1221]
gi|121613090|ref|YP_001001351.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni
81-176]
gi|148926798|ref|ZP_01810477.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni
CG8486]
gi|153952159|ref|YP_001398986.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. doylei
269.97]
gi|157415929|ref|YP_001483185.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 81116]
gi|167006240|ref|ZP_02271998.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni
81-176]
gi|205355721|ref|ZP_03222491.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni
CG8421]
gi|283956163|ref|ZP_06373648.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 1336]
gi|305432598|ref|ZP_07401759.1| 50S ribosomal protein L3 [Campylobacter coli JV20]
gi|315125092|ref|YP_004067096.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|57167534|gb|AAW36313.1| ribosomal protein L3 [Campylobacter jejuni RM1221]
gi|121504221|gb|EAQ71912.2| ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 81-176]
gi|145844523|gb|EDK21630.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni
CG8486]
gi|152939605|gb|ABS44346.1| ribosomal protein L3 [Campylobacter jejuni subsp. doylei 269.97]
gi|157386893|gb|ABV53208.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 81116]
gi|205346498|gb|EDZ33131.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni
CG8421]
gi|283792317|gb|EFC31101.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 1336]
gi|304444309|gb|EFM36961.1| 50S ribosomal protein L3 [Campylobacter coli JV20]
gi|307748567|gb|ADN91837.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni M1]
gi|315018814|gb|ADT66907.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|315059153|gb|ADT73482.1| LSU ribosomal protein L3p [Campylobacter jejuni subsp. jejuni S3]
gi|315931325|gb|EFV10294.1| ribosomal protein L3 family protein [Campylobacter jejuni subsp.
jejuni 327]
Length = 191
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 68/205 (33%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
+ K+GM+ I VT+L + N +V + G V G+A K V+
Sbjct: 4 IVEKIGMSRTIT--NPSIAVTLLRVVNAKVCEV----EGGKALVAYPKGKASNKCVAGQQ 57
Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
+ + S + L + D +++ V+ T G+G+SG MK
Sbjct: 58 KKYNLSAEYNRFATLEVANTEAGDLDETP--------LNEAKILKVSFNTKGRGYSGVMK 109
Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
RHNF G A+HG S HR HGS G R+ PGRV KMAG G +VTVKN EVVS D +
Sbjct: 110 RHNFAGGPASHG-SRFHRRHGSIGNREWPGRVQPGMKMAGHYGNTKVTVKN-EVVSYDAE 167
Query: 186 RGLILVKGCVPGAKKNSWILVRDSF 210
+++VKG VPG + +R +
Sbjct: 168 NKILVVKGAVPG-YNGAMGKIRIAK 191
>gi|218563293|ref|YP_002345073.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|42559704|sp|Q9PLX1|RL3_CAMJE RecName: Full=50S ribosomal protein L3
gi|112361000|emb|CAL35801.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|284926898|gb|ADC29250.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni
IA3902]
gi|315926634|gb|EFV06014.1| ribosomal protein L3 family protein [Campylobacter jejuni subsp.
jejuni DFVF1099]
gi|315930642|gb|EFV09664.1| ribosomal protein L3 family protein [Campylobacter jejuni subsp.
jejuni 305]
Length = 191
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 67/205 (32%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
+ K+GM+ I VT+L + N +V + G V G+A K V+
Sbjct: 4 IVEKIGMSRTIT--NPSIAVTLLRVVNAKVCEV----EGGKALVAYPKGKASNKCVAGQQ 57
Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
+ + S + L + D +++ V+ T G+G+SG MK
Sbjct: 58 KKYNLSAEYNRFATLEVANTEAGDLDETP--------LNEAKILKVSFNTKGRGYSGVMK 109
Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
RHNF G A+HG S HR HGS G R+ PGRV KMAG G +VT+KN EVVS D +
Sbjct: 110 RHNFAGGPASHG-SRFHRRHGSIGNREWPGRVQPGMKMAGHYGNTKVTIKN-EVVSYDAE 167
Query: 186 RGLILVKGCVPGAKKNSWILVRDSF 210
+++VKG VPG + +R +
Sbjct: 168 NKILVVKGAVPG-YNGAMGKIRIAK 191
>gi|297380500|gb|ADI35387.1| 50S ribosomal protein L3 [Helicobacter pylori v225d]
Length = 191
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 61/203 (30%), Positives = 92/203 (45%), Gaps = 16/203 (7%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
+ +K+GM+ + PVT+L + +V +NG V + K +
Sbjct: 3 FLVQKIGMSRTIDAN--STPVTLLKVLQAKVCQL----ENGKALVAYAMHKKHNKAIEGQ 56
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+ + S + L + Q+ D S + V + T G+GF+G M
Sbjct: 57 QKKYQLSKEFNHFATLKASQQQELGD-------LDLSALETLKKVKASFKTKGRGFAGVM 109
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR NF G A HG S HR GS G R+ PGRV K +KMAG G VT +N EV+S D
Sbjct: 110 KRWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN-EVLSFDK 167
Query: 185 KRGLILVKGCVPGAKKNSWILVR 207
+ ++ +KG V G ++ +R
Sbjct: 168 ESMVLALKGSVAGFS-GAYGRIR 189
>gi|224417885|ref|ZP_03655891.1| 50S ribosomal protein L3 [Helicobacter canadensis MIT 98-5491]
gi|253827224|ref|ZP_04870109.1| 50S ribosomal protein L3 [Helicobacter canadensis MIT 98-5491]
gi|313141427|ref|ZP_07803620.1| 50S ribosomal protein L3 [Helicobacter canadensis MIT 98-5491]
gi|253510630|gb|EES89289.1| 50S ribosomal protein L3 [Helicobacter canadensis MIT 98-5491]
gi|313130458|gb|EFR48075.1| 50S ribosomal protein L3 [Helicobacter canadensis MIT 98-5491]
Length = 192
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 60/196 (30%), Positives = 91/196 (46%), Gaps = 15/196 (7%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
+ K+GM+ IPVT+L + +V +G A+ + K ++K
Sbjct: 3 FLVEKIGMSRTVAKP--SIPVTLLKVKTAKVCEV----LDGGKALVA---YHQGKTLNKA 53
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+ G N+ + F + + + + V+ T G+GFSG M
Sbjct: 54 IAGQQKKYNLDKEFNKFATIEVGNAE----VGDLDLAILESAKRAKVSFNTKGRGFSGVM 109
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR NF G HG S HR+ GS G R+ PGRV KKMAG G +VTV+N E++S D
Sbjct: 110 KRWNFQGGPGAHG-SRFHRAPGSIGNREWPGRVQPGKKMAGHYGNEKVTVQN-EIISFDK 167
Query: 185 KRGLILVKGCVPGAKK 200
+ ++++KG VPG
Sbjct: 168 ENNVLVLKGSVPGFNG 183
>gi|261838638|gb|ACX98404.1| ribosomal protein L3 [Helicobacter pylori 51]
Length = 191
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 61/203 (30%), Positives = 93/203 (45%), Gaps = 16/203 (7%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
+ +K+GM+ + PVT+L + +V +NG V + K +
Sbjct: 3 FLVQKIGMSRTIDAN--STPVTLLKVLQAKVCQL----ENGKALVAYAMHKKYNKAIEGQ 56
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+ + S + L + Q+ D S + V + T G+GF+G M
Sbjct: 57 QKKYQLSKEFNHFATLKASQQQELGD-------LDLSTLETLKRVKASFKTKGRGFAGVM 109
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR NF G A HG S HR GS G R+ PGRV K +KMAG G VT +N EV+S D
Sbjct: 110 KRWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN-EVLSFDK 167
Query: 185 KRGLILVKGCVPGAKKNSWILVR 207
+ ++++KG V G ++ +R
Sbjct: 168 ESMVLVLKGSVAGFS-GAYGRIR 189
>gi|15612304|ref|NP_223957.1| 50S ribosomal protein L3 [Helicobacter pylori J99]
gi|7674309|sp|Q9ZJR4|RL3_HELPJ RecName: Full=50S ribosomal protein L3
gi|4155816|gb|AAD06790.1| 50S RIBOSOMAL PROTEIN L3 [Helicobacter pylori J99]
Length = 191
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 16/203 (7%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
+ +K+GM+ + PVT+L + +V +NG V + K +
Sbjct: 3 FLVQKIGMSRTIDAN--STPVTLLKVLQAKVCQL----ENGKALVAYAMHKKYNKAIEGQ 56
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+ + S + L + ++ D S + V + T G+GF+G M
Sbjct: 57 QKKYQLSKEFNHFATLKASQQKELGD-------LDLSALETLKRVKASFKTKGRGFAGVM 109
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR NF G A HG S HR GS G R+ PGRV K +KMAG G VT +N EV+S D
Sbjct: 110 KRWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN-EVLSFDK 167
Query: 185 KRGLILVKGCVPGAKKNSWILVR 207
+ ++++KG V G ++ +R
Sbjct: 168 ESMVLVLKGSVAGFS-GAYGRIR 189
>gi|308064096|gb|ADO05983.1| 50S ribosomal protein L3 [Helicobacter pylori Sat464]
Length = 191
Score = 112 bits (279), Expect = 5e-23, Method: Composition-based stats.
Identities = 61/203 (30%), Positives = 92/203 (45%), Gaps = 16/203 (7%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
+ +K+GM+ + PVT+L + +V +NG V + K +
Sbjct: 3 FLVQKIGMSRTIDAN--STPVTLLKVLQAKVCQL----ENGKALVAYAMHKKHNKAIEGQ 56
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+ + S + L + Q+ D S + V + T G+GF+G M
Sbjct: 57 QKKYQLSKEFNHFATLKASQQQELGD-------LDLSALETLKRVKASFKTKGRGFAGVM 109
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR NF G A HG S HR GS G R+ PGRV K +KMAG G VT +N EV+S D
Sbjct: 110 KRWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN-EVLSFDK 167
Query: 185 KRGLILVKGCVPGAKKNSWILVR 207
+ ++ +KG V G ++ +R
Sbjct: 168 ESMVLALKGSVAGFS-GAYGRIR 189
>gi|15645932|ref|NP_208111.1| 50S ribosomal protein L3 [Helicobacter pylori 26695]
gi|108563689|ref|YP_628005.1| 50S ribosomal protein L3 [Helicobacter pylori HPAG1]
gi|208435216|ref|YP_002266882.1| ribosomal protein L3 [Helicobacter pylori G27]
gi|210135476|ref|YP_002301915.1| 50S ribosomal protein L3 [Helicobacter pylori P12]
gi|217032072|ref|ZP_03437572.1| hypothetical protein HPB128_16g32 [Helicobacter pylori B128]
gi|298735656|ref|YP_003728181.1| 50S ribosomal protein L3 [Helicobacter pylori B8]
gi|2500226|sp|P56031|RL3_HELPY RecName: Full=50S ribosomal protein L3
gi|2314481|gb|AAD08358.1| ribosomal protein L3 (rpl3) [Helicobacter pylori 26695]
gi|107837462|gb|ABF85331.1| ribosomal protein L3 [Helicobacter pylori HPAG1]
gi|208433145|gb|ACI28016.1| ribosomal protein L3 [Helicobacter pylori G27]
gi|210133444|gb|ACJ08435.1| 50S ribosomal protein L3 [Helicobacter pylori P12]
gi|216946220|gb|EEC24828.1| hypothetical protein HPB128_16g32 [Helicobacter pylori B128]
gi|298354845|emb|CBI65717.1| large subunit ribosomal protein L3 [Helicobacter pylori B8]
gi|317010002|gb|ADU80582.1| 50S ribosomal protein L3 [Helicobacter pylori India7]
gi|317178058|dbj|BAJ55847.1| 50S ribosomal protein L3 [Helicobacter pylori F16]
Length = 191
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 16/203 (7%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
+ +K+GM+ + PVT+L + +V +NG V + K +
Sbjct: 3 FLVQKIGMSRTIDAN--STPVTLLKVLQAKVCQL----ENGKALVAYAMHKKHNKAIEGQ 56
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+ + S + L + ++ D S + V + T G+GF+G M
Sbjct: 57 QKKYQLSKEFNHFATLKASQQKELGD-------LDLSALETLKRVKASFKTKGRGFAGVM 109
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR NF G A HG S HR GS G R+ PGRV K +KMAG G VT +N EV+S D
Sbjct: 110 KRWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN-EVLSFDK 167
Query: 185 KRGLILVKGCVPGAKKNSWILVR 207
+ ++++KG V G ++ +R
Sbjct: 168 ESMVLVLKGSVAGFS-GAYGRIR 189
>gi|242309319|ref|ZP_04808474.1| 50s ribosomal protein L3 [Helicobacter pullorum MIT 98-5489]
gi|239523890|gb|EEQ63756.1| 50s ribosomal protein L3 [Helicobacter pullorum MIT 98-5489]
Length = 192
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 62/196 (31%), Positives = 92/196 (46%), Gaps = 15/196 (7%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
+ K+GM+ IPVT+L + N +V + G V G++ K+++
Sbjct: 3 FLVEKIGMSRTVAKP--SIPVTLLKVKNAKVCEVL---EGGKALVAYHQGKSINKSIAGQ 57
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+ + + L + D S + V+ T G+GFSG M
Sbjct: 58 QKKYNLDKEYNKFATLEVNNTEAGD--------LDLSVLENAKRAKVSFNTKGRGFSGVM 109
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR NF G HG S HR+ GS G R+ PGRV KKMAG G +VTV+N E++S D
Sbjct: 110 KRWNFQGGPGAHG-SRFHRAPGSIGNREWPGRVQPGKKMAGHYGNEKVTVQN-EIISFDK 167
Query: 185 KRGLILVKGCVPGAKK 200
+ G++++KG VPG
Sbjct: 168 EHGVLVLKGSVPGFNG 183
>gi|124484910|ref|YP_001029526.1| 50S ribosomal protein L3P [Methanocorpusculum labreanum Z]
gi|212288407|sp|A2SPK3|RL3_METLZ RecName: Full=50S ribosomal protein L3P
gi|124362451|gb|ABN06259.1| LSU ribosomal protein L3P [Methanocorpusculum labreanum Z]
Length = 333
Score = 111 bits (278), Expect = 7e-23, Method: Composition-based stats.
Identities = 54/278 (19%), Positives = 87/278 (31%), Gaps = 69/278 (24%)
Query: 1 MRSGVVARKLGMTCVYNIE--------GR--RIPVTVLHLDNCQVVVHRTLDKNGYMAVQ 50
M G K GMT V I+ G+ +PVTV+ + V R K+ Y
Sbjct: 37 MLQGFAGYKAGMTHVIMIDDHKKSPTEGKEVMVPVTVIEIPAMTVAAIRVYVKDTYGKHP 96
Query: 51 VGAGEAKV-----KNVSKPMRGFFSSVNVS------------PKKKLFEFRVQKDDDLLP 93
+ A+ ++K + + +P
Sbjct: 97 LTEVWAENLEALSGRITKAKTNNAAKATEKINAAIGDVVEVMVLMYTKPTELTGVPKKVP 156
Query: 94 VGSVFSP-----------------------SYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130
S + GQ D+TG+T GKGF GA+KR
Sbjct: 157 DLMEIRVAGGSAQERFDYALSILGTDVDMKSLLSEGQFADITGITKGKGFQGAVKRFGIT 216
Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-------- 182
+ H + R G+ G P V M G+MG + T N ++ +
Sbjct: 217 LRKRKHARTKKERHIGTLGP-WTPHHVRWQVPMPGQMGFQQRTEFNKRIIKIGENADEIN 275
Query: 183 ---------DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+ +L+KG +PG K + +R + +
Sbjct: 276 PAGGFLHYGLVRNNYVLIKGSIPGPAKR-LVRIRSATR 312
>gi|207091947|ref|ZP_03239734.1| 50S ribosomal protein L3 [Helicobacter pylori HPKX_438_AG0C1]
Length = 191
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 59/193 (30%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
+ +K+GM+ + PVT+L + +V +NG V + K +
Sbjct: 3 FLVQKIGMSRTIDAN--STPVTLLKVLQAKVCQL----ENGKALVAYAMHKKHNKAIEGQ 56
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+ + S + L + ++ D S + V + T G+GF+G M
Sbjct: 57 QKKYQLSKEFNHFATLKASQQKELGD-------LDLSALETLKRVKASFKTKGRGFAGVM 109
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR NF G A HG S HR GS G R+ PGRV K +KMAG G VT +N EV+S D
Sbjct: 110 KRWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN-EVLSFDK 167
Query: 185 KRGLILVKGCVPG 197
+ ++++KG V G
Sbjct: 168 ESMVLVLKGSVAG 180
>gi|237753023|ref|ZP_04583503.1| 50s ribosomal protein l3 [Helicobacter winghamensis ATCC BAA-430]
gi|229375290|gb|EEO25381.1| 50s ribosomal protein l3 [Helicobacter winghamensis ATCC BAA-430]
Length = 192
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 63/196 (32%), Positives = 92/196 (46%), Gaps = 15/196 (7%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
+ K+GM+ IPVT+L + +V + G V G++ K+++
Sbjct: 3 FLVEKIGMSRTIGKP--SIPVTLLKVKTAKVCEVL---EGGKALVAYHQGKSTNKSIAGQ 57
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+ + + L + D S + V+ T G+GFSG M
Sbjct: 58 QKKYNLDKEYNRFATLEVNNTEVGD--------LDFSSLENAKRAKVSFNTKGRGFSGVM 109
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR NF G A HG S HR+ GS G R+ PGRV KKMAG G +VTV+N E+VS D
Sbjct: 110 KRWNFQGGPAAHG-SRFHRAPGSIGNREWPGRVQPGKKMAGHYGNEKVTVQN-EIVSFDK 167
Query: 185 KRGLILVKGCVPGAKK 200
+ G++++KG VPG
Sbjct: 168 EHGVLVLKGSVPGFNG 183
>gi|188528107|ref|YP_001910794.1| 50S ribosomal protein L3 [Helicobacter pylori Shi470]
gi|308183429|ref|YP_003927556.1| 50S ribosomal protein L3 [Helicobacter pylori PeCan4]
gi|188144347|gb|ACD48764.1| 50S ribosomal protein L3 [Helicobacter pylori Shi470]
gi|308065614|gb|ADO07506.1| 50S ribosomal protein L3 [Helicobacter pylori PeCan4]
Length = 191
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 60/203 (29%), Positives = 92/203 (45%), Gaps = 16/203 (7%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
+ +K+GM+ + PVT+L + +V +NG V + K +
Sbjct: 3 FLVQKIGMSRTIDAN--STPVTLLKVLQAKVCQL----ENGKALVAYAMHKKHNKAIEGQ 56
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+ + S + L + ++ D S + V + T G+GF+G M
Sbjct: 57 QKKYQLSKEFNHFATLKASQQKELGD-------LDLSALETLKRVKASFKTKGRGFAGVM 109
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR NF G A HG S HR GS G R+ PGRV K +KMAG G VT +N EV+S D
Sbjct: 110 KRWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN-EVLSFDK 167
Query: 185 KRGLILVKGCVPGAKKNSWILVR 207
+ ++ +KG V G ++ +R
Sbjct: 168 ESMVLALKGSVAGFS-GAYGRIR 189
>gi|254779861|ref|YP_003057967.1| 50S ribosomal protein L3 [Helicobacter pylori B38]
gi|254001773|emb|CAX30004.1| 50S ribosomal subunit protein L3 [Helicobacter pylori B38]
Length = 191
Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 16/203 (7%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
+ +K+GM+ + PVT+L + +V +NG V + K +
Sbjct: 3 FLVQKIGMSRTIDAN--STPVTLLKVLQAKVCQL----ENGKALVAYAMHKKHNKAIEGQ 56
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+ + S + L + ++ D S + V + T G+GF+G M
Sbjct: 57 QKKYQLSKEFNHFATLKASQQKELGD-------LDLSTLETLKRVKASFKTKGRGFAGVM 109
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR NF G A HG S HR GS G R+ PGRV K +KMAG G VT +N EV+S D
Sbjct: 110 KRWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN-EVLSFDK 167
Query: 185 KRGLILVKGCVPGAKKNSWILVR 207
+ ++++KG V G ++ +R
Sbjct: 168 ESMVLVLKGSVAGFS-GAYGRIR 189
>gi|15678033|ref|NP_275147.1| 50S ribosomal protein L3P [Methanothermobacter thermautotrophicus
str. Delta H]
gi|3122720|sp|O26110|RL3_METTH RecName: Full=50S ribosomal protein L3P
gi|2621048|gb|AAB84521.1| ribosomal protein L3 (E.coli ) [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 337
Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats.
Identities = 52/284 (18%), Positives = 88/284 (30%), Gaps = 72/284 (25%)
Query: 5 VVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDK----------- 43
+ K GMT V ++ + PVT+L + V+ RT +K
Sbjct: 41 LAGYKAGMTHVMMVDNQKNSPTEGMEVSTPVTILEVPPLTVMAVRTYEKTSRGLKTLGEV 100
Query: 44 -----------------NGYMAVQVGAG---------EAKVKNVSKPMRGFFSSVNVSPK 77
+ Y + +V + P
Sbjct: 101 LATETKDDLRRKLTPPADDYDQEAAIEKIRSNMEYVADVRVIVHTNPRLASVPKKKPEVF 160
Query: 78 KKLFEFRVQKDDDLLP----VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLR 133
+ + ++ V + F+ G VD +T GKGF G +KR
Sbjct: 161 ECGLGGKTPEEKFEYALEILGKDVRASEIFSEGAFVDAIAVTKGKGFQGPVKRWGIRIQY 220
Query: 134 ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS---------VDD 184
S R GS G P R AG+MG +R T N +++ V+
Sbjct: 221 GKAARSSKGRHIGSLGP-WTPSRTMWTVPQAGQMGYHRRTEYNKQILKIGDASEADLVNP 279
Query: 185 K----------RGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+++KG VPG K +++R + ++A +
Sbjct: 280 DGGFVRYGLVRNDYVMIKGSVPGPTKR-LVVLRKAIRAAGKQEE 322
>gi|146319920|ref|YP_001199631.1| 50S ribosomal protein L3 [Streptococcus suis 98HAH33]
gi|145690726|gb|ABP91231.1| 50S ribosomal protein L3 [Streptococcus suis 98HAH33]
Length = 112
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 39/115 (33%), Positives = 63/115 (54%), Gaps = 3/115 (2%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + +
Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYAAVQVGFDDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMT 115
+KP +G + N +PK+ + EF+ + L VG + F G +VDVTG
Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFKNIEG---LEVGQEITVETFAAGDVVDVTGTV 112
>gi|149195353|ref|ZP_01872439.1| 50S ribosomal protein L3 [Caminibacter mediatlanticus TB-2]
gi|149134485|gb|EDM22975.1| 50S ribosomal protein L3 [Caminibacter mediatlanticus TB-2]
Length = 192
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 61/203 (30%), Positives = 91/203 (44%), Gaps = 16/203 (7%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
+ K+GM+ + IPVT+L + +V + ++G V G+ V+KP
Sbjct: 3 FIVEKIGMSRTVGE--KSIPVTLLKIVPAKVCEVK---EDGKALVAYPKGKK----VNKP 53
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+ G +S R + S + V +T + G+GF G +
Sbjct: 54 IEGMQKKYGLS----KEFNRFVELKVANTEAGDLSLEPLNEAKKVKITFKSKGRGFQGVV 109
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR+ FGG + S HR+ GS G + PGRV KKM G G VTV N EVV +
Sbjct: 110 KRYGFGGGPGS-HGSRFHRAPGSIGNCEFPGRVMPGKKMPGHYGNKNVTV-NAEVVEFNP 167
Query: 185 KRGLILVKGCVPGAKKNSWILVR 207
G++++KG VPGA S +R
Sbjct: 168 DMGVLVIKGSVPGA-NGSLGKIR 189
>gi|39938686|ref|NP_950452.1| ribosomal protein L3 [Onion yellows phytoplasma OY-M]
gi|42559576|sp|P60455|RL3_ONYPE RecName: Full=50S ribosomal protein L3
gi|39721795|dbj|BAD04285.1| ribosomal protein L3 [Onion yellows phytoplasma OY-M]
Length = 157
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 58/157 (36%), Positives = 86/157 (54%), Gaps = 9/157 (5%)
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDD----LLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
M G F +PK+ + E D + L VG++ + F VG LVDVTG + GKGF
Sbjct: 1 MLGHFKKATTAPKRFIKEINFSADVNSNLANLAVGALITNDLFQVGDLVDVTGTSKGKGF 60
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
+G++KRHN +HG S HR GS G + K KK+ G MG VT++NL ++
Sbjct: 61 AGSIKRHNQSRGPESHG-SRYHRRPGSMGPIKGKL---KGKKLPGHMGHETVTIQNLAIL 116
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
SVD ++ L L+KG VPG K +++++ + K +
Sbjct: 117 SVDTEKNLFLIKGNVPGPNKG-FVIIKSAVKKLTKEQ 152
>gi|288560108|ref|YP_003423594.1| ribosomal protein L3P Rpl3p [Methanobrevibacter ruminantium M1]
gi|288542818|gb|ADC46702.1| ribosomal protein L3P Rpl3p [Methanobrevibacter ruminantium M1]
Length = 336
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 56/280 (20%), Positives = 87/280 (31%), Gaps = 71/280 (25%)
Query: 4 GVVARKLGMTC--VYNIEGRR--------IPVTVLHLDNCQVVVHRTLDK--NGYMAVQV 51
G+ K GMT V + + PVTVL + ++ R+ +K +G A+
Sbjct: 40 GLAGYKAGMTHAMVVDNDKNSPSHGMEVFTPVTVLEVPPLVILGIRSYEKTAHGLKAITE 99
Query: 52 GAGEAKVKNVS--------------------------------KPMRGFFSSVNVSPKKK 79
+ + +S S P+
Sbjct: 100 VIADNLDEELSRKITLPKDYDQSEAIAKIQDALEKTEEVRVLVHTNPKMASVPKKKPEIF 159
Query: 80 LFEFRVQKDDDLLPVGSVF------SPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLR 133
++ L + F+ GQ VD T GKG G +KR N
Sbjct: 160 ECALGGSSAEEKLNYALGILGQEIRASDIFSEGQYVDAIATTKGKGVQGVVKRWNIRIQY 219
Query: 134 ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV----------- 182
S R GS G P R AG+MG ++ T N +V+ +
Sbjct: 220 GKAMRSGKGRHVGSIGP-WSPERTMWTVAQAGQMGYHKRTEFNKKVIKIGDVSEVDAVNP 278
Query: 183 --------DDKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
K +LVKG VPG K +++R + +
Sbjct: 279 AGGFIRYGLVKNDYVLVKGSVPGPTKR-LVILRQAIRPKK 317
>gi|283953682|ref|ZP_06371213.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 414]
gi|283794723|gb|EFC33461.1| 50S ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 414]
Length = 191
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 68/205 (33%), Positives = 97/205 (47%), Gaps = 17/205 (8%)
Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
+ K+GM+ I VT+L + N +V + G V G+A K V+
Sbjct: 4 IVEKIGMSRTIT--NPSIAVTLLRIVNVKVCEV----EGGKALVAYPKGKASNKCVAGQQ 57
Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
+ + S + L + D +++ V+ T G+G+SG MK
Sbjct: 58 KKYNLSAEYNRFATLEVVNTEVGDLDETP--------LNEAKILKVSFNTKGRGYSGVMK 109
Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
RHNF G A+HG S HR HGS G R+ PGRV KMAG G +VTVKN EVVS D +
Sbjct: 110 RHNFSGGPASHG-SRFHRRHGSIGNREWPGRVQPGMKMAGHYGNTKVTVKN-EVVSYDAE 167
Query: 186 RGLILVKGCVPGAKKNSWILVRDSF 210
+++VKG VPG + +R +
Sbjct: 168 NKILVVKGAVPG-YNGAMGKIRIAK 191
>gi|257458708|ref|ZP_05623832.1| 50S ribosomal protein L3 [Campylobacter gracilis RM3268]
gi|257443897|gb|EEV19016.1| 50S ribosomal protein L3 [Campylobacter gracilis RM3268]
Length = 192
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 58/195 (29%), Positives = 90/195 (46%), Gaps = 15/195 (7%)
Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
+ K+GM+ + PVT+L L N ++ K V + K +K +
Sbjct: 4 IVEKIGMSRTIDTS--STPVTLLRLINTKICEVCDEKK-----AIVAYADGKAY--NKAI 54
Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
G ++S K+ + ++ L + + ++V V+ + GKG+ G +K
Sbjct: 55 AGIQKKYSLS-KEFNKFATLSLENAELGDQN---LDVLSEAKIVKVSFRSKGKGYQGVIK 110
Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
RH F G A HG S HR GS G + PGRV +MAG G +T KN EVVS D +
Sbjct: 111 RHGFAGGPAAHG-SRFHRRPGSIGNCEWPGRVQPGMRMAGHTGNETITAKN-EVVSFDAE 168
Query: 186 RGLILVKGCVPGAKK 200
++++KG VPG
Sbjct: 169 NKILVLKGSVPGFNG 183
>gi|118474609|ref|YP_891244.1| 50S ribosomal protein L3 [Campylobacter fetus subsp. fetus 82-40]
gi|118413835|gb|ABK82255.1| ribosomal protein L3 [Campylobacter fetus subsp. fetus 82-40]
Length = 192
Score = 108 bits (271), Expect = 5e-22, Method: Composition-based stats.
Identities = 60/195 (30%), Positives = 88/195 (45%), Gaps = 15/195 (7%)
Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
+ K+GM+ + PVT+L L +V + G V +A K +
Sbjct: 4 IVEKIGMSR--TVSAPSTPVTLLRLVPAKVCEL---GEGGKAIVAYAHTKADNKAIKGQQ 58
Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
+ + S + L + D + +++ V+ T G+GF G +K
Sbjct: 59 KKYGLSSEFNSFATLSVANSEAGD--------LDVNPLNEAKVLKVSFNTKGRGFQGVIK 110
Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
RH F G A+HG S HR GS G + PGRV +KMAG G + TVKN EVVS D
Sbjct: 111 RHGFSGGPASHG-SRFHRRPGSIGNCEWPGRVQPGRKMAGHYGNEKTTVKN-EVVSFDSA 168
Query: 186 RGLILVKGCVPGAKK 200
G++++KG VPG
Sbjct: 169 NGILVLKGSVPGFNG 183
>gi|154305466|ref|XP_001553135.1| hypothetical protein BC1G_08502 [Botryotinia fuckeliana B05.10]
gi|150853289|gb|EDN28481.1| hypothetical protein BC1G_08502 [Botryotinia fuckeliana B05.10]
Length = 189
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 50/116 (43%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 1 MRSGVVARKLGMTCVYN-IEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
+R+G + K GMT +Y+ G R P TV+ LD QVV H+T +KNGY AVQVGAG
Sbjct: 74 LRTGALGIKKGMTALYDPETGVRTPCTVVQLDRVQVVAHKTREKNGYYAVQVGAGWKHPS 133
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMT 115
NV++P G + V+PK+ + EFRV+ + LL VG +F GQ VD
Sbjct: 134 NVTRPELGHYEKSQVAPKRYMAEFRVKNESGLLDVGRSIGAEWFIEGQFVDARANR 189
>gi|154175439|ref|YP_001409153.1| 50S ribosomal protein L3 [Campylobacter curvus 525.92]
gi|153793233|gb|EAT99616.2| ribosomal protein L3 [Campylobacter curvus 525.92]
Length = 192
Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats.
Identities = 61/202 (30%), Positives = 96/202 (47%), Gaps = 16/202 (7%)
Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
+ K+GM+ + + PVT+L L +V + V K +K +
Sbjct: 4 IVEKIGMSRTIST--QSTPVTLLKLVEAKVCEI-----DENKRAIVAYAHTKAN--NKTI 54
Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
G N++ + F + + + + +++ V+ + G+G+ G +K
Sbjct: 55 AGQQKKYNLTAEFNKFATLEVANSE----VGNLDFTPLSEAKILKVSFNSKGRGYQGVVK 110
Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
RH F G +HG S HR HGS G + PGRV KMAG MG +VTVKN E+VS D +
Sbjct: 111 RHGFSGGPKSHG-SRFHRRHGSIGNCEWPGRVQPGMKMAGHMGNEKVTVKN-ELVSFDAE 168
Query: 186 RGLILVKGCVPGAKKNSWILVR 207
G+++VKGCVPG + +R
Sbjct: 169 NGIVVVKGCVPG-HNGAMGRIR 189
>gi|21450877|gb|AAK43985.2|AF370170_1 putative ribosomal protein L3 [Arabidopsis thaliana]
Length = 134
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 51/93 (54%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
KGF G MKRH F G+ A+HG S+SHRS GSTG R PG+VFK +KMAGRMG ++ TVKN+
Sbjct: 1 KGFQGCMKRHGFSGMPASHGASLSHRSGGSTGQRDAPGKVFKGRKMAGRMGADQRTVKNV 60
Query: 178 EVVSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
V +D R L+ V+G VPGA+ N ++ ++D++
Sbjct: 61 WVYKIDPARNLMWVRGQVPGAEGN-FVFIKDAW 92
>gi|323304802|gb|EGA58561.1| Mrpl9p [Saccharomyces cerevisiae FostersB]
Length = 119
Score = 108 bits (269), Expect = 8e-22, Method: Composition-based stats.
Identities = 47/94 (50%), Positives = 64/94 (68%), Gaps = 1/94 (1%)
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
MKR+ F GLRA+HG SI HR GS G QDPGRV +KM G MG VT++N++V+ VD
Sbjct: 1 MKRYGFKGLRASHGTSIMHRHGGSYGQNQDPGRVLPGRKMPGHMGNEHVTIQNVKVLKVD 60
Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
D+ +I VKG V G KNS++ ++D+ K ++ K
Sbjct: 61 DENNVIWVKGSVAGP-KNSFVKIQDAIKKNLSIK 93
>gi|11499509|ref|NP_070750.1| 50S ribosomal protein L3P [Archaeoglobus fulgidus DSM 4304]
gi|3914742|sp|O28354|RL3_ARCFU RecName: Full=50S ribosomal protein L3P
gi|2648621|gb|AAB89331.1| LSU ribosomal protein L3P (rpl3P) [Archaeoglobus fulgidus DSM 4304]
Length = 331
Score = 107 bits (268), Expect = 8e-22, Method: Composition-based stats.
Identities = 61/279 (21%), Positives = 90/279 (32%), Gaps = 73/279 (26%)
Query: 4 GVVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53
G K GMT V I+ R +PVTV+ +V R K Y
Sbjct: 39 GFAGYKAGMTHVVMIDDRKNSPTYGEEVVVPVTVIETPPMKVAAVRVYKKTQYGMQIAA- 97
Query: 54 GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP------------- 100
E N+ + + P + + V+ + V + P
Sbjct: 98 -EVWSNNLDDFLDRRLNLPKKEPDVEKLKAAVENGASEVRVVTYTQPYLITGVPKKVPDV 156
Query: 101 ---------------------------SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLR 133
F G ++DV +T GKGF G +KR L
Sbjct: 157 MEHRIGGNVEEALDYAISKLGKEISVSEVFDEGAIIDVIAVTKGKGFQGPVKRWGVITLD 216
Query: 134 ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRG------ 187
A H S HR G+ G +P V AG+MG ++ T N ++ + + G
Sbjct: 217 AKHARSSKHRRVGNLGP-WNPHHVRWTVPQAGQMGFHQRTEYNKRLIKI-GENGEEITPK 274
Query: 188 ------------LILVKGCVPGAKKNSWILVRDSFKSAV 214
+LV G VPG K I +RD+ +
Sbjct: 275 GGFLHYGVIRTQYVLVTGSVPGPVKR-LIRMRDAIRPPK 312
>gi|307354323|ref|YP_003895374.1| 50S ribosomal protein L3 [Methanoplanus petrolearius DSM 11571]
gi|307157556|gb|ADN36936.1| ribosomal protein L3 [Methanoplanus petrolearius DSM 11571]
Length = 337
Score = 107 bits (268), Expect = 1e-21, Method: Composition-based stats.
Identities = 54/278 (19%), Positives = 88/278 (31%), Gaps = 72/278 (25%)
Query: 4 GVVARKLGMTCVYNIE--------GR--RIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53
G K+GMT V I+ G+ +PVTV+ + +V+ R + Y
Sbjct: 41 GYAGYKVGMTHVIMIDDHKNSPSEGKEISVPVTVIEIPPMKVIAIRAYTNDTYGRKAFAE 100
Query: 54 GEAKVKNVSKPMRGFFSSVNVS---------------------------------PKKKL 80
++ + S + + PKK
Sbjct: 101 VWSENIDESISRATQIPKKHNAEEQKEKILKGIEDGFVTDIFAIMYTQPEQLTGVPKKVP 160
Query: 81 FEFRVQKDDDLLPVGSVFSPS----------YFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130
++ L F S GQ +DVT +T GKG GA+KR
Sbjct: 161 ELMEIRIAGGDLSTRLDFGISKLGEEVEIENVANAGQYIDVTAVTTGKGTQGAVKRWGIQ 220
Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV--DDKR-- 186
+ H R G+ G P V G+MG + T N ++ + + +
Sbjct: 221 VRKRKHSRGKKKRHIGNLGP-WTPHHVRWQVPQMGQMGYQQRTEFNKRILRIGNNPEEIN 279
Query: 187 -------------GLILVKGCVPGAKKNSWILVRDSFK 211
+L+KG +PG K I +R + +
Sbjct: 280 PDGGFLHYGLVRGKYVLIKGSIPGPTKR-LIRIRPAIR 316
>gi|255321773|ref|ZP_05362928.1| 50S ribosomal protein L3 [Campylobacter showae RM3277]
gi|255301253|gb|EET80515.1| 50S ribosomal protein L3 [Campylobacter showae RM3277]
Length = 192
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 62/202 (30%), Positives = 97/202 (48%), Gaps = 16/202 (7%)
Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
+ K+GM+ + IPVT+L + N +V + G V G+AK K +
Sbjct: 4 IVEKIGMSR--TVNNPSIPVTLLKVVNAKVCEV---SECGCAIVAYAKGKAKNKAIEGQQ 58
Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
+ + + + L + D S + +++ V+ + GKG+ G +K
Sbjct: 59 KKYSLTAEFNKFATLQVANKEAGD--------LDISPLSSAKILKVSFSSKGKGYQGVVK 110
Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
RH F G +HG S H+ HGS G R+ PGRV KMAG G +VTVKN E+VS D +
Sbjct: 111 RHGFAGGPKSHG-SRFHKRHGSIGNREWPGRVQPGMKMAGHTGNEKVTVKN-EIVSFDAE 168
Query: 186 RGLILVKGCVPGAKKNSWILVR 207
G++++KG V G + +R
Sbjct: 169 NGILVLKGSVAG-YNGAMGRIR 189
>gi|293553879|ref|ZP_06674485.1| ribosomal protein L3 [Enterococcus faecium E1039]
gi|291601931|gb|EFF32177.1| ribosomal protein L3 [Enterococcus faecium E1039]
Length = 106
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 60/109 (55%), Positives = 74/109 (67%), Gaps = 3/109 (2%)
Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
G ++DVTG T GKGF G +KRH HG S HR GS G P RVFKNK++A
Sbjct: 1 AGDIIDVTGTTKGKGFQGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRVFKNKRLA 58
Query: 165 GRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
GRMGGNRVT++NLEVV VD +R +IL+KG VPGAKK S I ++ + K+
Sbjct: 59 GRMGGNRVTIQNLEVVRVDAERNVILIKGNVPGAKK-SLITIKSAVKAK 106
>gi|304314253|ref|YP_003849400.1| 50S ribosomal protein L3P [Methanothermobacter marburgensis str.
Marburg]
gi|302587712|gb|ADL58087.1| 50S ribosomal protein L3P [Methanothermobacter marburgensis str.
Marburg]
Length = 337
Score = 107 bits (266), Expect = 1e-21, Method: Composition-based stats.
Identities = 51/284 (17%), Positives = 87/284 (30%), Gaps = 72/284 (25%)
Query: 5 VVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG 54
+ K GMT V ++ + PVT+L + V+ R +K +G
Sbjct: 41 LAGYKAGMTHVMMVDNQKNSPTEGMEVSTPVTILEVPPLTVMAVRAYEKTSRGLKTLGEV 100
Query: 55 -------------------------------------EAKVKNVSKPMRGFFSSVNVSPK 77
+ +V + P
Sbjct: 101 LATETKEDLRRKLTPPAEDYDQEAAIERIRSNMEYVADVRVIVHTNPRLASVPKKKPEVF 160
Query: 78 KKLFEFRVQKDDDLLP----VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLR 133
+ + ++ V + F+ G VD +T GKGF G +KR
Sbjct: 161 ECGLGGKTPEEKFEYALGILGKDVRASEIFSEGAFVDAIAVTKGKGFQGPVKRWGIRIQY 220
Query: 134 ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV----------- 182
S R GS G P R AG+MG +R T N +++ +
Sbjct: 221 GKAARSSKGRHIGSLGP-WTPSRTMWTVPQAGQMGYHRRTEYNKQILKIGDASEADQVNP 279
Query: 183 --------DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+ ++VKG VPG K +++R + ++A +
Sbjct: 280 SGGFVRYGLVRNDYVMVKGSVPGPTKR-LVVLRKAIRAAGKQEE 322
>gi|315453735|ref|YP_004074005.1| 50S ribosomal protein L3 [Helicobacter felis ATCC 49179]
gi|315132787|emb|CBY83415.1| 50S ribosomal protein L3 [Helicobacter felis ATCC 49179]
Length = 190
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 63/192 (32%), Positives = 88/192 (45%), Gaps = 16/192 (8%)
Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
+ +K+GM+ V + +PVT+L + +V + V V K +K +
Sbjct: 4 LVQKIGMSRVVGA--QSVPVTLLKVLESKVCEIKDK------QVLVAYPLHKTH--NKAI 53
Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
G N+S D + + + T T G+GFSGAMK
Sbjct: 54 AGQQKKYNLS----KEFNHFATLDAQVTELGDLPLEPLESAKHIKATFYTKGRGFSGAMK 109
Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
R NF G A HG S HR GS G R+ PGRV K KKMAG G +VT N EV+S D +
Sbjct: 110 RWNFQGGPAAHG-SRFHRRLGSIGNREWPGRVQKGKKMAGHYGNEKVTCHN-EVLSFDKE 167
Query: 186 RGLILVKGCVPG 197
++++KG V G
Sbjct: 168 SKILVLKGSVVG 179
>gi|153803653|ref|ZP_01958239.1| ribosomal protein L3 [Vibrio cholerae MZO-3]
gi|124120812|gb|EAY39555.1| ribosomal protein L3 [Vibrio cholerae MZO-3]
Length = 93
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 54/90 (60%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G++ RK+GMT V+ +G IPVTV+ ++ +V +TL+ +GY A+QV G K V
Sbjct: 1 MIGLIGRKVGMTRVFTEDGVSIPVTVVEVEANRVSQVKTLETDGYAAIQVTTGSKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL 91
+KP G F+ V + L+EFR++ ++
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRLENGEEF 90
>gi|154340798|ref|XP_001566352.1| ribosomal protein L3-like protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063675|emb|CAM39860.1| ribosomal protein L3-like protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 467
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 60/218 (27%), Positives = 91/218 (41%), Gaps = 8/218 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN-GYMAVQVGAGEAKVKN 60
R G+V K+ Y+ G + T + Q+V H T + + G V VGA V+
Sbjct: 130 RFGMVGVKVFTCKDYDDLGNQFDCTAFWFPDNQIVKHSTRNGDVGTDKVYVGAMNVPVEF 189
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+ F+ + V K F V D PVG+ +F GQ V +T G+
Sbjct: 190 HKPHVAAFYKAAGVPVKHVSAGFPVTP-DAYAPVGTKLDVRHFKPGQEVTITFQNTDYGY 248
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G M RH F G G S R G G + R++ +MAG+ G + T + + V
Sbjct: 249 QGVMFRHGFDGGYVWLGDSKWQRRPGCMG-AEGQKRIYPGHRMAGQTGASAETYQGVPVW 307
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+D K LI + + A +++ RD+ N KG
Sbjct: 308 RIDYKNSLIYLPTLI-DADVGTYVKFRDTI----NTKG 340
>gi|88603499|ref|YP_503677.1| 50S ribosomal protein L3P [Methanospirillum hungatei JF-1]
gi|109893522|sp|Q2FU91|RL3_METHJ RecName: Full=50S ribosomal protein L3P
gi|88188961|gb|ABD41958.1| LSU ribosomal protein L3P [Methanospirillum hungatei JF-1]
Length = 337
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 56/278 (20%), Positives = 89/278 (32%), Gaps = 72/278 (25%)
Query: 4 GVVARKLGMTCVYNIE--------GR--RIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53
G K+GMT V ++ G+ +PVTV+ + + +V R + Y +
Sbjct: 41 GFAGYKVGMTHVIMVDDHAHSPNEGKDIMVPVTVIEVPDMRVAAIRVYRHDTYGNHVLTE 100
Query: 54 GEAKVKNVSKPMRGFFSSVNVS---------------------------------PKKKL 80
A + R S PKK
Sbjct: 101 VWADSFDKELSRRLNLSKNYKREEAEKKIREALEADKIVDVVALTYTRPSVLTGVPKKVP 160
Query: 81 FEFRVQKDDDLLPVGSVFSPSY----------FTVGQLVDVTGMTIGKGFSGAMKRHNFG 130
+ D + + S F VGQ DVT +T GKG G +KR
Sbjct: 161 DLMETRIDGGSMTERFEYGLSMLGKDFDIRSLFKVGQYTDVTAITKGKGTQGPVKRWGVH 220
Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-------- 182
+ H R G+ G P V M G+MG ++ T N ++ +
Sbjct: 221 LRKRKHSRGKKERHVGTLGP-WTPHHVRWQVPMMGQMGYHQRTEFNKRLLKIGEDGAEIT 279
Query: 183 ---------DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+ + +L+KG VPG K + +R + +
Sbjct: 280 PEGGFINYGEVRARYVLIKGSVPGPSKR-LVRIRHAMR 316
>gi|66766345|dbj|BAD99041.1| ribosomal protein L3 [Desulfovibrio vulgaris]
Length = 115
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 40/113 (35%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
+ G++ RK+GMT ++ +G + VTV+ C V+ R + +GY AVQ+ EAK K+V
Sbjct: 4 KLGILGRKVGMTRIFASDGSAVAVTVIQAGPCPVIQVRNGETDGYDAVQIAFEEAKEKHV 63
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGM 114
+KP RG F+ + L E R++ + VG + S F G+ V VTG
Sbjct: 64 TKPARGHFAKAGKGLFRNLREIRLEAPAE-FEVGQELTVSLFAAGEKVKVTGT 115
>gi|57505356|ref|ZP_00371285.1| ribosomal protein L3 [Campylobacter upsaliensis RM3195]
gi|57016492|gb|EAL53277.1| ribosomal protein L3 [Campylobacter upsaliensis RM3195]
Length = 192
Score = 106 bits (264), Expect = 3e-21, Method: Composition-based stats.
Identities = 62/195 (31%), Positives = 97/195 (49%), Gaps = 15/195 (7%)
Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
+ K+GM+ + I VT+L + +V ++G V G+A K ++
Sbjct: 4 IVEKIGMSR--TVSNPSIAVTLLRVVGAKVCEV---QESGKALVAYSKGKANNKCIAGMQ 58
Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
+ + S + L + D S +++ V+ + G+G+SG MK
Sbjct: 59 KKYNLSAEFNKFATLEVANTEAGD--------LDESPLNEAKILKVSFNSKGRGYSGVMK 110
Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
RHNFGG A+HG S HR HGS G R+ PGRV KMAG+ G +++VKN E+VS D +
Sbjct: 111 RHNFGGGPASHG-SRFHRRHGSIGNREWPGRVQPGMKMAGQYGNTKISVKN-ELVSYDAE 168
Query: 186 RGLILVKGCVPGAKK 200
++++KG VPG
Sbjct: 169 NKILVLKGAVPGFNG 183
>gi|315639321|ref|ZP_07894483.1| 50S ribosomal protein L3 [Campylobacter upsaliensis JV21]
gi|315480647|gb|EFU71289.1| 50S ribosomal protein L3 [Campylobacter upsaliensis JV21]
Length = 192
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 63/195 (32%), Positives = 95/195 (48%), Gaps = 15/195 (7%)
Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
+ K+GM+ + I VT+L + +V + G V G+A K ++
Sbjct: 4 IVEKIGMSR--TVSNPSIAVTLLRVVGAKVCEV---QEGGKALVAYSKGKANNKCIAGMQ 58
Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
+ + S + L + D S +++ V+ + G+G+SG MK
Sbjct: 59 KKYNLSAEFNKFATLEVANTEAGD--------LDESPLNEAKILKVSFNSKGRGYSGVMK 110
Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
RHNFGG A+HG S HR HGS G R+ PGRV KMAG G +V+VKN E+VS D +
Sbjct: 111 RHNFGGGPASHG-SRFHRRHGSIGNREWPGRVQPGMKMAGHYGNAKVSVKN-ELVSYDAE 168
Query: 186 RGLILVKGCVPGAKK 200
++++KG VPG
Sbjct: 169 NKILVLKGAVPGFNG 183
>gi|41615218|ref|NP_963716.1| 50S ribosomal protein L3P [Nanoarchaeum equitans Kin4-M]
gi|42559579|sp|P60458|RL3_NANEQ RecName: Full=50S ribosomal protein L3P
gi|40068942|gb|AAR39277.1| NEQ433 [Nanoarchaeum equitans Kin4-M]
Length = 321
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 65/270 (24%), Positives = 100/270 (37%), Gaps = 60/270 (22%)
Query: 5 VVARKLGMTC-VYNIEGRRI--PVTVLHLDNCQVVVHRTLDKNG---------YMAVQ-- 50
A K+GMT + NI G R+ PVTVL V+ + K Y
Sbjct: 43 FAAYKVGMTHTILNINGERVFTPVTVLEAPELLVIGAKAYKKENGALKEISSLYFNDLPQ 102
Query: 51 -----------VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFS 99
E K + +SK + VS + + + + +P+G
Sbjct: 103 YVFRKIPKLKNYNFEEKKEQFLSKADNADEVKIIVSTQPWKIKLKKTPEIFDIPIGGSDV 162
Query: 100 P-----------------SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISH 142
F GQ VDV +T GKGF G +KR + + H
Sbjct: 163 NKKLEYALSLLGKELSINDVFKEGQYVDVIAVTKGKGFQGVIKRFHVHRRQ--HKSEKGV 220
Query: 143 RSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL-------------- 188
R G+ G R PGR+F M G+MG +R T N ++ + + +
Sbjct: 221 RKVGAIGSRG-PGRIFPTVPMPGQMGYHRRTEYNKLIIKIGEPLNVEGGWVRYGQVIGPT 279
Query: 189 ILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
IL+KG VPG +K I++R++ + +
Sbjct: 280 ILLKGSVPGPRKR-LIILREAIRPPRKQEK 308
>gi|20093853|ref|NP_613700.1| 50S ribosomal protein L3P [Methanopyrus kandleri AV19]
gi|42559662|sp|Q8TY90|RL3_METKA RecName: Full=50S ribosomal protein L3P
gi|19886782|gb|AAM01630.1| Ribosomal protein L3 [Methanopyrus kandleri AV19]
Length = 361
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 61/282 (21%), Positives = 88/282 (31%), Gaps = 71/282 (25%)
Query: 4 GVVARKLGMTCVYNIE--------GR--RIPVTVLHLDNCQVVVHRTLDK--NGYMAVQV 51
G K GMT I+ G +PVT+L V R +GY V
Sbjct: 45 GFAGYKAGMTHAIMIDDWPNSPTEGEEISVPVTILDAPPMYVAAIRAYAPTPDGYRCVTE 104
Query: 52 GAGEAKV-----KNVSKPMRGFF-------------------------SSVNVSPKKKLF 81
E + + P G PKKK
Sbjct: 105 AWAEIPEELEMDRVFTVPKDGEAGDLDKIEELVDEGIVEEIRVIVATQPKKAGVPKKKPD 164
Query: 82 EFRVQKDDDLLPVGSVFSP----------SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
+ + ++ F G++VDV+ +T GKGF G +KR
Sbjct: 165 VMEYRIGGKDVRERFEYAVEILSEEIRAKDVFDEGEIVDVSAITKGKGFQGVVKRWGVTI 224
Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV--DDKR--- 186
R GS G P RV MAG++G ++ T N ++ + D +
Sbjct: 225 QDRKTQRKQKGRHIGSIGPI-TPSRVRWTVPMAGQVGYHQRTEHNKRILKIGEDGEEVTP 283
Query: 187 ------------GLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
I++ G VPG KK I VR + + N
Sbjct: 284 RGGFVNYGVVRGDYIMIHGTVPGPKKR-LIRVRPAVRPPKNA 324
>gi|322488784|emb|CBZ24031.1| ribosomal protein L3-like protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 467
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 58/218 (26%), Positives = 89/218 (40%), Gaps = 8/218 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN-GYMAVQVGAGEAKVKN 60
R G++ K Y+ G + T + Q+V H T + + G V VGA V+
Sbjct: 130 RFGLIGVKAFTCKDYDDLGNQFDCTAFWFPDNQIVKHSTRNGDVGTDKVYVGAMNVPVEF 189
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+ F+ + V K F + D PVG+ +F GQ V +T G+
Sbjct: 190 HKPHVAAFYKAAGVPVKHVSAGFPITP-DAYAPVGTKLDVRHFKPGQEVTITFQNTDYGY 248
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G M RH F G G S R G G + R++ +MAG+ G + T + V
Sbjct: 249 QGVMFRHGFDGGYVWLGDSKWQRRPGCMG-AEGQKRIYPGHRMAGQTGASAETYDGVPVW 307
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+D K LI + + A +++ RD+ N KG
Sbjct: 308 RIDYKNSLIYLPTLI-DADVGTYVKFRDTI----NTKG 340
>gi|254168629|ref|ZP_04875472.1| ribosomal protein L3 [Aciduliprofundum boonei T469]
gi|197622463|gb|EDY35035.1| ribosomal protein L3 [Aciduliprofundum boonei T469]
Length = 340
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 62/287 (21%), Positives = 91/287 (31%), Gaps = 82/287 (28%)
Query: 4 GVVARKLGMTCVYNIE--------GRRI--PVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53
G K GMT V+ I+ G+ I PVTV+ + +V R ++ Y +
Sbjct: 41 GFAGYKAGMTHVFTIDWRKHTTTAGQEIWTPVTVIEVPPMKVAGVRFYERTMYGLKSI-- 98
Query: 54 GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDD----------------------- 90
GE +N+ K + F K K E +D
Sbjct: 99 GEVWDENLDKELARRFPLPKEYSKDKALERIKGDIEDIRLIVHTQPKLVSGVPKKAPDIM 158
Query: 91 -----------------LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLR 133
L + + + G+ VDV +T GKGF G +KR L
Sbjct: 159 EIRVGGGTIDARKEYALNLLGKEIKFSDFKSDGKFVDVIAITKGKGFQGHVKRFGVKLLN 218
Query: 134 ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS-VD--------- 183
+ HR T P V AG+MG ++ T N +V VD
Sbjct: 219 QKNRK---HRRMIGTLGPWHPDWVRYTVPQAGQMGYHQRTEYNKRIVKYVDFIEENGEKK 275
Query: 184 ----------------DKRGLILVKGCVPGAKKNSWILVRDSFKSAV 214
K +L+ G VPG K + RD + +
Sbjct: 276 LAIDITPKGGFLHYGEVKNEYVLIHGSVPGPAKR-LVRFRDPVRQTL 321
>gi|94993441|ref|YP_601539.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS10750]
gi|94546949|gb|ABF36995.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS10750]
Length = 88
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 29/83 (34%), Positives = 49/83 (59%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY AVQVG + +
Sbjct: 1 MTKGILGKKVGMTQIFTESGEFIPVTVIEATPNVVLQVKTVETDGYEAVQVGFDDKREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEF 83
+KP +G + N +PK+ + EF
Sbjct: 61 SNKPAKGHVAKANTAPKRFIREF 83
>gi|296272640|ref|YP_003655271.1| 50S ribosomal protein L3 [Arcobacter nitrofigilis DSM 7299]
gi|296096814|gb|ADG92764.1| 50S ribosomal protein L3 [Arcobacter nitrofigilis DSM 7299]
Length = 191
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 17/206 (8%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
+ K+GM+ + +PVT+L + + +V +G V G+ K +
Sbjct: 3 FIVEKIGMSR--TVSVPAVPVTLLKVLDTKVCEV----TDGVAIVSYSNGKKFNKTIEGQ 56
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+ + S + + + D S +++ T T G+GFSGA+
Sbjct: 57 QKKYNLSKEFNRFATMEVANSEAGD--------LDVSGLAEAKILKTTFKTKGRGFSGAV 108
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR NF G RA+HG + R+ GS G + PGRV KKM G+ G V+VKN E+ S D
Sbjct: 109 KRWNFAGGRASHGHRMGKRT-GSIGNAEWPGRVQPGKKMPGQYGNTNVSVKN-EIFSFDA 166
Query: 185 KRGLILVKGCVPGAKKNSWILVRDSF 210
+ G++ VKG V G VR +
Sbjct: 167 ETGILAVKGSVSGP-NGGLGKVRIAK 191
>gi|223038516|ref|ZP_03608810.1| 50S ribosomal protein L3 [Campylobacter rectus RM3267]
gi|222880373|gb|EEF15460.1| 50S ribosomal protein L3 [Campylobacter rectus RM3267]
Length = 192
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 63/202 (31%), Positives = 98/202 (48%), Gaps = 16/202 (7%)
Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
+ K+GM+ + IPVT+L + N +V + G V G+AK K +
Sbjct: 4 IVEKIGMSR--TVNNPSIPVTLLKVVNAKVCEV---SECGSAIVAYAKGKAKNKAIEGQQ 58
Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
+ + + + L + D S + +++ V+ + GKG+ G +K
Sbjct: 59 KKYSLTAEFNKFATLQVANKEAGD--------LDFSPLSSAKILKVSFSSKGKGYQGVVK 110
Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
RH FGG +HG S H+ HGS G R+ PGRV KMAG G +VTVKN E+VS D +
Sbjct: 111 RHGFGGGPKSHG-SRFHKRHGSIGNREWPGRVQPGMKMAGHTGNEKVTVKN-EIVSFDAE 168
Query: 186 RGLILVKGCVPGAKKNSWILVR 207
G++++KG V G + +R
Sbjct: 169 NGILVLKGSVAG-YNGAMGRIR 189
>gi|34558027|ref|NP_907842.1| 50S ribosomal protein L3 [Wolinella succinogenes DSM 1740]
gi|42559590|sp|Q7M8D4|RL3_WOLSU RecName: Full=50S ribosomal protein L3
gi|34483745|emb|CAE10742.1| 50S RIBOSOMAL PROTEIN L3 [Wolinella succinogenes]
Length = 192
Score = 104 bits (260), Expect = 7e-21, Method: Composition-based stats.
Identities = 59/196 (30%), Positives = 89/196 (45%), Gaps = 15/196 (7%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
+ K+GM+ ++ PVT+L + + +V NG V G+ K +
Sbjct: 3 FLVEKIGMSRTISVP--STPVTLLKVKDAKVCEVL---GNGKALVAYAQGKDANKAIEGQ 57
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+ + S + L + D + V V+ T G+GF+G M
Sbjct: 58 QKKYNLSKEFNRFATLEVANGEAGDQD--------VAPLAQAVRVKVSLQTKGRGFTGVM 109
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR NF G A HG R GS G R+ PGRV KKMAG+ G +VTV+N E+VS D
Sbjct: 110 KRWNFAGGPAAHG-HRFKRRTGSIGNREWPGRVQPGKKMAGQYGNEKVTVQN-EIVSFDA 167
Query: 185 KRGLILVKGCVPGAKK 200
+ ++++KG +PG
Sbjct: 168 ENKILVLKGSIPGFNG 183
>gi|195175671|ref|XP_002028552.1| GL21036 [Drosophila persimilis]
gi|194104882|gb|EDW26925.1| GL21036 [Drosophila persimilis]
Length = 712
Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats.
Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
++ GF G +KRH + G+ A+HGV+ +HR G+ G + GRV+ KM G MG +
Sbjct: 503 SVDHGFQGVVKRHGYMGMPASHGVTKTHRRPGNIGGGGEKGRVWPGTKMPGHMGNRWRVL 562
Query: 175 KNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCK 217
K L + K ++ V+G VPG + + D+ K
Sbjct: 563 KGLRIWRTKAKYNVMWVQGSSVPGP-TGGLVYIYDTILPLRKLK 605
>gi|322378779|ref|ZP_08053208.1| 50S ribosomal protein L3 [Helicobacter suis HS1]
gi|322380628|ref|ZP_08054780.1| 50S ribosomal protein L3 [Helicobacter suis HS5]
gi|321146950|gb|EFX41698.1| 50S ribosomal protein L3 [Helicobacter suis HS5]
gi|321148809|gb|EFX43280.1| 50S ribosomal protein L3 [Helicobacter suis HS1]
Length = 194
Score = 104 bits (260), Expect = 9e-21, Method: Composition-based stats.
Identities = 60/192 (31%), Positives = 89/192 (46%), Gaps = 16/192 (8%)
Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
+ +K+GM+ + +PVT+L + + +V + G + V + K ++
Sbjct: 4 LVQKIGMSRIVGAS--SVPVTLLKVLDSKVCEIK----EGQLLVAYALHKKHNKAIAGQQ 57
Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
+ + S + L D S Q + T T G+GFSGAMK
Sbjct: 58 KKYQLSQEFNHFATLKGHVEAVGD--------LSIEPLEGVQYIKATFYTKGRGFSGAMK 109
Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
R NF G A HG S HR GS G R+ PGRV K KKMAG G +VT N +V+S D +
Sbjct: 110 RWNFQGGPAAHG-SRFHRRLGSIGNREWPGRVQKGKKMAGHYGNEKVTCHN-QVLSFDKE 167
Query: 186 RGLILVKGCVPG 197
++++KG G
Sbjct: 168 NKILVLKGSTAG 179
>gi|322500651|emb|CBZ35728.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 467
Score = 104 bits (259), Expect = 9e-21, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 89/218 (40%), Gaps = 8/218 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN-GYMAVQVGAGEAKVKN 60
R G++ K Y+ G + T + Q+V H T + + G V VGA V+
Sbjct: 130 RFGMIGVKAFTCKDYDELGNQFDCTAFWFPDNQIVKHSTRNGDVGTDKVYVGAMNVPVEF 189
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+ F+ + V K F V D PVG+ +F GQ V +T G+
Sbjct: 190 HKPHVAAFYKAAGVPVKHVSAGFPVTP-DAYAPVGTKLDVRHFKPGQEVTITFQNTDYGY 248
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G M RH F G G S R G G + R++ +MAG+ G + T + V
Sbjct: 249 QGVMFRHGFDGGYVWLGDSKWQRRPGCMG-AEGQKRIYPGHRMAGQTGASAETYDGVPVW 307
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+D K LI + + A +++ RD+ N KG
Sbjct: 308 RIDYKNSLIYLPTLI-DADVGTYVKFRDTI----NTKG 340
>gi|73536476|ref|XP_847662.1| ribosomal protein L3-like protein [Leishmania major strain
Friedlin]
gi|321438575|emb|CBZ12334.1| ribosomal protein L3-like protein [Leishmania major strain
Friedlin]
Length = 467
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 89/218 (40%), Gaps = 8/218 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN-GYMAVQVGAGEAKVKN 60
R G++ K Y+ G + T + Q+V H T + + G V VGA V+
Sbjct: 130 RFGMIGVKAFTCKDYDDLGNQFDCTAFWFPDNQIVKHSTRNGDVGTDKVYVGAMNVPVEF 189
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+ F+ + V K F V D PVG+ +F GQ V +T G+
Sbjct: 190 HKPHVAAFYKAAGVPVKHVSAGFPVTP-DAYAPVGTKLDVRHFKPGQEVTITFQNTDYGY 248
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G M RH F G G S R G G + R++ +MAG+ G + T + V
Sbjct: 249 QGVMFRHGFDGGYVWLGDSKWQRRPGCMG-AEGQKRIYPGHRMAGQTGASAETYDGVPVW 307
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+D K LI + + A +++ RD+ N KG
Sbjct: 308 RIDYKNSLIYLPTLI-DADVGTYVKFRDTI----NTKG 340
>gi|293556601|ref|ZP_06675169.1| ribosomal protein L3 [Enterococcus faecium E1039]
gi|291601277|gb|EFF31561.1| ribosomal protein L3 [Enterococcus faecium E1039]
Length = 101
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 1/102 (0%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M G++ +K+GMT ++ G IPVTV+ V+ +T++ +GY A+QVG + +
Sbjct: 1 MTKGILGKKVGMTQIFTESGELIPVTVVEATPNVVLQVKTMETDGYEAIQVGYQDMREVL 60
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSY 102
+KP +G + N +PK+ + EF+ + + VG +
Sbjct: 61 SNKPAKGHVAKANTAPKRFIREFKNVELGE-YEVGKEITVDV 101
>gi|84489708|ref|YP_447940.1| 50S ribosomal protein L3P [Methanosphaera stadtmanae DSM 3091]
gi|109893523|sp|Q2NFV6|RL3_METST RecName: Full=50S ribosomal protein L3P
gi|84373027|gb|ABC57297.1| 50S ribosomal protein L3P [Methanosphaera stadtmanae DSM 3091]
Length = 337
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 53/290 (18%), Positives = 86/290 (29%), Gaps = 85/290 (29%)
Query: 4 GVV---ARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKNGYMAVQ 50
G++ K+GMT V ++ R +PVT+L V+ R K Y
Sbjct: 37 GLLAFAGYKVGMTHVTALDSRKGSPTENMELSVPVTILEAPPLVVLGIRAYTKTTYGLKT 96
Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP---------- 100
+ + + S PK E ++++ + +
Sbjct: 97 LT-----DVIANDNLDDELSRKISVPKFDDIEAKIEELRNKIDDIDEIRVLIHTKPKLTS 151
Query: 101 ------------------------------------SYFTVGQLVDVTGMTIGKGFSGAM 124
F G+ D T GKG G +
Sbjct: 152 VPKKKPEVLEFGLGGKSVEDKLEYAISILGKEITPQDVFQEGEYTDAIATTKGKGVQGPV 211
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR S R GS G P R M G+MG ++ T N +++ + D
Sbjct: 212 KRFGVRIQYGKAARSGIERHVGSIGP-WTPNRTMWTVAMQGQMGYHKRTEYNKKLLKIGD 270
Query: 185 K-------------------RGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
+ ILVKG +PG K +++R ++A
Sbjct: 271 ESEVDLINPDGGFVKYGFVKNNYILVKGSLPGPSKR-LVVLRKGVRNASK 319
>gi|157165062|ref|YP_001467720.1| 50S ribosomal protein L3 [Campylobacter concisus 13826]
gi|157101500|gb|ABV23519.1| ribosomal protein L3 [Campylobacter concisus 13826]
Length = 192
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 61/202 (30%), Positives = 95/202 (47%), Gaps = 16/202 (7%)
Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
+ K+GM+ + PVT+L L +V + V K +K +
Sbjct: 4 IVEKIGMSRTIAT--KSTPVTLLKLVEAKVCEI-----DENKRAIVAYAHTKAN--NKAI 54
Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
G N++ + F + + + +++ V+ + G+G+ G +K
Sbjct: 55 AGQQKKYNLTAEFNKFATLEVANSE----VGNLDFTPLNEAKILKVSFNSKGRGYQGVVK 110
Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
RH FGG +HG S HR HGS G + PGRV KMAG MG +VTVKN E++S D +
Sbjct: 111 RHGFGGGPKSHG-SRFHRRHGSIGNCEWPGRVQPGMKMAGHMGNEKVTVKN-ELISFDAQ 168
Query: 186 RGLILVKGCVPGAKKNSWILVR 207
G+++VKGCVPG + +R
Sbjct: 169 NGIVVVKGCVPG-HNGAMGKIR 189
>gi|289597193|ref|YP_003483889.1| ribosomal protein L3 [Aciduliprofundum boonei T469]
gi|289534980|gb|ADD09327.1| ribosomal protein L3 [Aciduliprofundum boonei T469]
Length = 340
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 58/282 (20%), Positives = 82/282 (29%), Gaps = 78/282 (27%)
Query: 4 GVVARKLGMTCVYNIE--------GRRI--PVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53
G K GMT V+ I+ G+ I PVTV+ + +V R ++ Y +G
Sbjct: 41 GFAGYKAGMTHVFTIDWRKHTTTAGQEIWTPVTVIEVPPMKVAGVRFYERTMYGLKSIGE 100
Query: 54 GEAKVKNVSKPMRGFFSSVNVSPKK---------------KLFEFRVQKDDDLLPVGSVF 98
+ + R K V P
Sbjct: 101 VWDENLDKELARRFPLPKEYSKDKALERIKGDIEDIRLIVHTQPRLVSGVPKKAPDIMEI 160
Query: 99 SP-----------------------SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRAT 135
+ + G+ VDV +T GKGF G +KR L
Sbjct: 161 RVGGGTIDARKEYALNLLGKEIKFSDFKSDGKFVDVIAITKGKGFQGHVKRFGVKLLNQK 220
Query: 136 HGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS-VD----------- 183
+ HR T P V AG+MG ++ T N +V VD
Sbjct: 221 NRK---HRRMIGTLGPWHPDWVRYTVPQAGQMGYHQRTEYNKRIVKYVDFIEENGEKRLA 277
Query: 184 --------------DKRGLILVKGCVPGAKKNSWILVRDSFK 211
K +L+ G VPG K I RD +
Sbjct: 278 IDITPKGGFPHYGEVKNAYVLIHGSVPGPAKR-LIRFRDPVR 318
>gi|219851107|ref|YP_002465539.1| 50S ribosomal protein L3P [Methanosphaerula palustris E1-9c]
gi|254803682|sp|B8GKD3|RL3_METPE RecName: Full=50S ribosomal protein L3P
gi|219545366|gb|ACL15816.1| ribosomal protein L3 [Methanosphaerula palustris E1-9c]
Length = 337
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 49/279 (17%), Positives = 82/279 (29%), Gaps = 74/279 (26%)
Query: 5 VVARKLGMTCVYNIE--------GR--RIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG 54
K+GMT V ++ G+ +PVT++ + +V R + Y +
Sbjct: 42 FAGYKVGMTHVIMVDDHKNSPTEGKDIMVPVTIIEIPPMKVAAIRAYTADTYGKRALTEV 101
Query: 55 EAKVKNVSKPMRGFFSSVNVS---------------------------------PKKKLF 81
+ + R PKK
Sbjct: 102 WTEQLSTLLGRRITLPKKYSEEAGFKALSEAVAAGTVTELHALMYTQPDTLTGVPKKVPE 161
Query: 82 EFRV----------QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
V + + V G+ DVT +T GKG G +KR
Sbjct: 162 LMEVCIGGGTLEQKVEFAQSIIGNEVNLADVIGAGEYADVTAITTGKGTQGPVKRWGIML 221
Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRG---- 187
+ H R G+ G +P V G+MG + T N ++ + + G
Sbjct: 222 RKRKHSRGGKKRHIGNLGP-WNPHHVRWQVPQMGQMGYQQRTDFNKRILKI-GENGTDIT 279
Query: 188 --------------LILVKGCVPGAKKNSWILVRDSFKS 212
+++KG VPG K I +R + +
Sbjct: 280 PAGGFLHYGLLRNPYVMIKGSVPGPVKR-LIRIRPAVRK 317
>gi|152993893|ref|YP_001359614.1| 50S ribosomal protein L3 [Sulfurovum sp. NBC37-1]
gi|151425754|dbj|BAF73257.1| 50S ribosomal protein L3 [Sulfurovum sp. NBC37-1]
Length = 193
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 15/203 (7%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
+ K+GM+ ++ +PVT+L + + +V + ++G V + + K++
Sbjct: 3 FIVEKIGMSR--TVDVPSVPVTLLKVVDTKVCEVK---EDGKALVAYNSSKKLNKSIEGQ 57
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
F S + + + D +P+ V + T G+GFSG M
Sbjct: 58 QTKFGVSKEFNKFMTIEVAEGTEAGD-------LNPAALAEAAAVKTSLNTKGRGFSGGM 110
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KRHNFGG +HG R GS G + PGRV K KKM G+ G +VTVKN +VVS D
Sbjct: 111 KRHNFGGGPGSHGHRFGRR-IGSIGNAEWPGRVQKGKKMPGQYGNTKVTVKN-DVVSFDA 168
Query: 185 KRGLILVKGCVPGAKK-NSWILV 206
+ G++++KG +PG + +
Sbjct: 169 ENGILVLKGSIPGHNGARGLVRI 191
>gi|146092753|ref|XP_001466509.1| ribosomal protein L3-like protein [Leishmania infantum]
gi|134070872|emb|CAM69548.1| ribosomal protein L3-like protein [Leishmania infantum JPCM5]
Length = 467
Score = 103 bits (258), Expect = 1e-20, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 89/218 (40%), Gaps = 8/218 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN-GYMAVQVGAGEAKVKN 60
R G++ K Y+ G + T + Q+V H T + + G V VGA V+
Sbjct: 130 RFGMIGVKAFTCKDYDDLGNQFDCTAFWFPDNQIVKHSTRNGDVGTDKVYVGAMNVPVEF 189
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+ F+ + V K F V D PVG+ +F GQ V +T G+
Sbjct: 190 HKPHVAAFYKAAGVPVKHVSAGFPVTP-DAYAPVGTKLDVRHFKPGQEVTITFQNTDYGY 248
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G M RH F G G S R G G + R++ +MAG+ G + T + V
Sbjct: 249 QGVMFRHGFDGGYVWLGDSKWQRRPGCMG-AEGQKRIYPGHRMAGQTGASAETYDGVPVW 307
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+D K LI + + A +++ RD+ N KG
Sbjct: 308 RIDYKNSLIYLPTLI-DADVGTYVKFRDTI----NTKG 340
>gi|124487970|gb|ABN12068.1| mitochondrial ribosomal protein L3-llike protein [Maconellicoccus
hirsutus]
Length = 170
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 42/114 (36%), Positives = 63/114 (55%), Gaps = 1/114 (0%)
Query: 96 SVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155
+ +F VG VDV G+TI +GF G MKR F G ATHG + +HR G+ G +D
Sbjct: 1 TPLLAPHFKVGDYVDVRGLTIQRGFQGVMKRWGFHGQPATHGQTKTHRRPGTIGRGRD-K 59
Query: 156 RVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDS 209
+V KK+ G MG T++ L+++ ++ K +I V+G NS + V D+
Sbjct: 60 KVQIGKKLPGHMGYRYRTLRGLQILRMNTKYNVIWVQGQAIAGDTNSIVYVYDT 113
>gi|323337449|gb|EGA78698.1| Mrpl9p [Saccharomyces cerevisiae Vin13]
Length = 119
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 45/92 (48%), Positives = 62/92 (67%), Gaps = 1/92 (1%)
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
MKR+ F GLRA+HG SI HR GS G QDPGRV +KM G MG VT++N++V+ VD
Sbjct: 1 MKRYGFKGLRASHGTSIMHRHGGSYGQNQDPGRVLPGRKMPGHMGNEHVTIQNVKVLKVD 60
Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D+ +I VKG V G KNS++ ++D+ ++
Sbjct: 61 DENNVIWVKGSVAGP-KNSFVKIQDAIXKNLS 91
>gi|198462074|ref|XP_001352331.2| GA20958 [Drosophila pseudoobscura pseudoobscura]
gi|198139691|gb|EAL29374.2| GA20958 [Drosophila pseudoobscura pseudoobscura]
Length = 233
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 2/105 (1%)
Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
+++ GF G +KRH + G+ A+HGV+ +HR G+ G + GRV+ KM G MG
Sbjct: 93 VSVDHGFQGVVKRHGYKGMPASHGVTKTHRRPGNIGGGGEKGRVWPGTKMPGHMGNRWRV 152
Query: 174 VKNLEVVSVDDKRGLILVKG-CVPGAKKNSWILVRDSFKSAVNCK 217
+K L + + K ++ V+G VPG + + D+ K
Sbjct: 153 LKGLRIWRTNAKYNVMWVQGSSVPGP-TGGLVYIYDTILPLRKLK 196
>gi|213416462|ref|ZP_03349606.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
Length = 97
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 32/90 (35%), Positives = 52/90 (57%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY AVQV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAVQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDDL 91
+KP G F+ V + L+EFR+ + ++
Sbjct: 61 TKPEAGHFAKAGVEAGRGLWEFRLAEGEEY 90
>gi|322821701|gb|EFZ27955.1| mitochondrial ribosomal protein L3, putative [Trypanosoma cruzi]
Length = 425
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 89/218 (40%), Gaps = 8/218 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN-GYMAVQVGAGEAKVKN 60
R G+V K Y+ G + T + Q+V H T + + G V VGA V+
Sbjct: 89 RFGMVGVKAFTCKDYDELGNQFDCTAFWFPDNQIVRHSTRNGDVGTDRVYVGAMNVPVEF 148
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+ F+ + V K F + D PVG+ +F GQ V +T GF
Sbjct: 149 HKPHVAAFYKAAGVPVKHVCAGFPITP-DAYAPVGTKLDVRHFKPGQEVTITFQNTDYGF 207
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G M RH F G G S R G G + R++ +MAG+ G + T + + V
Sbjct: 208 RGVMFRHGFDGGYVWLGDSKWQRRPGCMGT-EGQKRIYPGHRMAGQTGASAETYQGVPVW 266
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+D K LI + + A +++ D+ N KG
Sbjct: 267 RIDYKNALIYLPTLI-DADVGTYVKFSDTI----NTKG 299
>gi|313125790|ref|YP_004036060.1| LSU ribosomal protein l3p [Halogeometricum borinquense DSM 11551]
gi|312292155|gb|ADQ66615.1| LSU ribosomal protein L3P [Halogeometricum borinquense DSM 11551]
Length = 338
Score = 101 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 56/280 (20%), Positives = 80/280 (28%), Gaps = 73/280 (26%)
Query: 4 GVVARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRTLDKNGYMAVQVG- 52
G K GMT V + +PVTV+ + V R + Y A +
Sbjct: 41 GFAGYKAGMTQVMMVNDEANSPREGMEEAVPVTVVETPPMRAVAVRAYEDTPYGAKPLTE 100
Query: 53 ----------------------------------AGEAKVKNVSKPMRGFFSSVNVSPKK 78
AGE V K
Sbjct: 101 VWASEFVENLDRTLDLPSEDTFEEDADDLRAAVEAGEVDDIRVITHTVPASMKNIPKKKP 160
Query: 79 KLFEFRV----------QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128
+ E RV D + G F G+ +D G+T GKG G +KR
Sbjct: 161 DVMETRVGGGSLQERSDFALDLVEEGGEHSMSDVFRAGEYLDAAGVTKGKGTQGPVKRWG 220
Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS------- 181
+ H R G+ G +P RV G+ G ++ T N ++
Sbjct: 221 VQKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVPQLGQTGYHQRTELNKRLIDLGDGDDA 279
Query: 182 -VD--------DKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD LVKG +PG K + R + +
Sbjct: 280 TVDGGFVGYGEVDGPYALVKGSLPGPDKR-LLRFRPAIRP 318
>gi|227871804|ref|ZP_03990207.1| possible ribosomal protein L3 [Oribacterium sinus F0268]
gi|227842340|gb|EEJ52567.1| possible ribosomal protein L3 [Oribacterium sinus F0268]
Length = 81
Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 34/79 (43%), Positives = 49/79 (62%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M+ ++A K+GMT +++ G IPVTVL C V +TL+ +GY AVQVG E + K
Sbjct: 1 MKKAILATKVGMTQIWDENGVLIPVTVLQAGPCVVTQVKTLENDGYKAVQVGFLEKREKL 60
Query: 61 VSKPMRGFFSSVNVSPKKK 79
V+KP++G F VS K+
Sbjct: 61 VNKPLKGQFDKAGVSYKRF 79
>gi|330899737|gb|EGH31156.1| 50S ribosomal protein L3 [Pseudomonas syringae pv. japonica str.
M301072PT]
Length = 77
Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 44/77 (57%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M GVV RK GMT ++ EG IPVTV+ ++ +V +T + +GY AVQV GE +
Sbjct: 1 MTIGVVGRKCGMTRIFTEEGVSIPVTVIEIEPNRVTQFKTEETDGYRAVQVTVGERRASR 60
Query: 61 VSKPMRGFFSSVNVSPK 77
V+ G F+ NV+
Sbjct: 61 VTAAQAGHFAKANVAAG 77
>gi|71411062|ref|XP_807797.1| mitochondrial ribosomal protein L3 [Trypanosoma cruzi strain CL
Brener]
gi|70871872|gb|EAN85946.1| mitochondrial ribosomal protein L3, putative [Trypanosoma cruzi]
Length = 473
Score = 101 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 59/218 (27%), Positives = 89/218 (40%), Gaps = 8/218 (3%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN-GYMAVQVGAGEAKVKN 60
R G+V K Y+ G + T + Q+V H T + + G V VGA V+
Sbjct: 137 RFGMVGVKAFTCKDYDELGNQFDCTAFWFPDNQIVRHSTRNGDVGTDRVYVGAMNVPVEF 196
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+ F+ + V K F + D PVG+ +F GQ V +T GF
Sbjct: 197 HKPHVAAFYKAAGVPVKHVCAGFPITP-DAYAPVGTKLDVRHFKPGQEVTITFQNTDYGF 255
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G M RH F G G S R G G + R++ +MAG+ G + T + + V
Sbjct: 256 RGVMFRHGFDGGYVWLGDSKWQRRPGCMGT-EGQKRIYPGHRMAGQTGASAETYQGVPVW 314
Query: 181 SVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+D K LI + + A +++ D+ N KG
Sbjct: 315 RIDYKNALIYLPTLI-DADVGTYVKFSDTI----NTKG 347
>gi|581341|emb|CAA78677.1| ribosomal protein L3 [Mycobacterium leprae]
Length = 100
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 54/89 (60%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R G++ KLGMT V++ R +PVTV+ V RTL+++GY AVQ+ GE + V
Sbjct: 4 RKGILGTKLGMTQVFDENNRVVPVTVVKAGPNVVTRIRTLERDGYSAVQLAYGEISPRKV 63
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDD 90
+KP+ G ++S V+P++ L E R+ D
Sbjct: 64 NKPVTGQYNSAGVNPRRYLAELRLDHPDA 92
>gi|224373649|ref|YP_002608021.1| 50S ribosomal protein L3 [Nautilia profundicola AmH]
gi|223589482|gb|ACM93218.1| ribosomal protein L3 [Nautilia profundicola AmH]
Length = 191
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 58/203 (28%), Positives = 88/203 (43%), Gaps = 17/203 (8%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
+ K+GM+ I IPVT+L + +V + + V G+ K +
Sbjct: 3 FIVEKIGMSRTVGIP--SIPVTLLKVVPAKVCEIK----DDKALVAYANGKKLNKAIEGM 56
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+ + + +L + D S + V +T + G+GF G +
Sbjct: 57 QKKYGLDKEFNRFVELKVANTEPGD--------LSIEPLKEAKKVKLTFKSKGRGFQGVV 108
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KRH F G S HR+ GS G + PGRV +KM G+ G VTV N EV+ D+
Sbjct: 109 KRHGFAGGPGG-HGSRFHRAPGSIGNCEWPGRVMPGRKMPGQYGNKNVTV-NAEVLEYDE 166
Query: 185 KRGLILVKGCVPGAKKNSWILVR 207
G++++KG VPGA S VR
Sbjct: 167 NMGVLVIKGSVPGA-NGSLGRVR 188
>gi|212724032|ref|NP_001132440.1| hypothetical protein LOC100193892 [Zea mays]
gi|194694386|gb|ACF81277.1| unknown [Zea mays]
Length = 232
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 41/123 (33%), Positives = 60/123 (48%), Gaps = 3/123 (2%)
Query: 3 SGVVARKLGMTCVYN-IEGRRIPVTVLHL--DNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
GV+A K+GM ++ G+ +PVTV+ V +T +GY AVQVG +
Sbjct: 45 VGVMATKVGMMTYFDPETGKPVPVTVVGFREGGNVVTQVKTAATDGYDAVQVGYHGVRED 104
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
+++P G P + L EFR+ D P + F G L+DV+G +IGKG
Sbjct: 105 KLTRPELGHLGKAGAPPLRHLQEFRLTAVDAFEPGQPLDFADLFKEGDLIDVSGNSIGKG 164
Query: 120 FSG 122
F G
Sbjct: 165 FQG 167
>gi|256810689|ref|YP_003128058.1| ribosomal protein L3 [Methanocaldococcus fervens AG86]
gi|256793889|gb|ACV24558.1| ribosomal protein L3 [Methanocaldococcus fervens AG86]
Length = 335
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 51/275 (18%), Positives = 84/275 (30%), Gaps = 69/275 (25%)
Query: 8 RKLGMTCVYNIE--------GRRI--PVTVLHLDNCQVVVHRTLDKNGYM---------- 47
K GMT + E G+ + PVTVL V R +N
Sbjct: 45 YKAGMTHAFIKEDNPKSPNAGQEVFTPVTVLEAPPINVCAIRVYGRNERNYLTTLTEVWA 104
Query: 48 --------------------------AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLF 81
A++ + +V + P +
Sbjct: 105 DNLDKELERKIKLPKKEERKTVEDLEAIKDKIEDVRVLVHTNPKLTCLPKKKPEILEIRI 164
Query: 82 EFRVQKD----DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHG 137
+ ++ + + F G+LVD G+T GKGF G +KR H
Sbjct: 165 GGKDIEERLNYAKEILGKQLNITDVFQEGELVDTIGVTKGKGFQGQVKRWGVKIQFGKHA 224
Query: 138 VSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV--DDK---------- 185
R GS G Q P V M G+MG ++ T N ++ + + +
Sbjct: 225 RKGVGRHVGSIGPWQ-PKMVMWTVPMPGQMGYHQRTEYNKRILKIGNNGEEITPKGGFLH 283
Query: 186 -----RGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
+++KG V G K + +R + +
Sbjct: 284 YGVIRNNYVVLKGSVQGPAKRLIV-LRSAIRPQEP 317
>gi|314984921|gb|EFT29013.1| 50S ribosomal protein L3 domain protein [Propionibacterium acnes
HL005PA1]
Length = 89
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 33/77 (42%), Positives = 46/77 (59%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
GV+ KLGMT +++ R +PVTV+ C V RT + +GY AVQ+G G K KNV+
Sbjct: 13 KGVLGTKLGMTQLWDEHNRLVPVTVIQAGPCVVTQVRTPETDGYSAVQLGYGAVKAKNVT 72
Query: 63 KPMRGFFSSVNVSPKKK 79
KP G F V+P++
Sbjct: 73 KPEAGHFEKAGVTPRRH 89
>gi|91772083|ref|YP_564775.1| 50S ribosomal protein L3P [Methanococcoides burtonii DSM 6242]
gi|121689445|sp|Q12ZV1|RL3_METBU RecName: Full=50S ribosomal protein L3P
gi|91711098|gb|ABE51025.1| LSU ribosomal protein L3P [Methanococcoides burtonii DSM 6242]
Length = 337
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 58/286 (20%), Positives = 90/286 (31%), Gaps = 72/286 (25%)
Query: 4 GVVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53
G K+GMT V I+ +PVT++ +V R K+ Y + +
Sbjct: 41 GFAGYKVGMTHVIMIDDVKHSLTEGTEISVPVTIIETPAIRVAAIRAYGKDTYGEIAIAE 100
Query: 54 GEAKVKNVSKPMRGFFSSV-----------------------------------NVSPKK 78
V + R +
Sbjct: 101 AWTDVLDKDLSRRLKTAKNPDVNASLEKLETLVESGRANDIRLITYTLPSTLTGVPKKVP 160
Query: 79 KLFEFRVQKDDDLLPVGSVFSP--------SYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130
+ E V D + F G++VDV +T G G G +KR
Sbjct: 161 DVMETGVSGSDVKAKFEYAKTVLGTMVEISDVFDNGKIVDVAAITTGHGTQGPVKRWGIN 220
Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS----VDDKR 186
++ H S R G+ G P V AG+MG ++ T N ++ VD+
Sbjct: 221 LMKNKHSRQGSLRQVGTLGP-WTPAHVSWRVPQAGQMGYHQRTDYNKRILKMSSDVDEVN 279
Query: 187 -------------GLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
IL+KG VPG K I +R+ +S V+ G+
Sbjct: 280 PAGGFVNYGLVRGNYILIKGSVPGPSKR-LIRLREPTRSKVSSIGE 324
>gi|325958531|ref|YP_004289997.1| 50S ribosomal protein L3 [Methanobacterium sp. AL-21]
gi|325329963|gb|ADZ09025.1| ribosomal protein L3 [Methanobacterium sp. AL-21]
Length = 337
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 54/279 (19%), Positives = 91/279 (32%), Gaps = 72/279 (25%)
Query: 4 GVVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53
G K+GMT V ++ PVT+L V+ R K+ +
Sbjct: 40 GFPGYKVGMTHVTMLDNVKNSPTSGMEVSSPVTILETPPVVVMGVRAYRKDTRGLKTLND 99
Query: 54 GEAKVKNVSKPMRGFFSS-VNVSPKKKLFEFRVQKDDDL--------------------- 91
AK + + +V K + ++ + +D+
Sbjct: 100 VMAKDLDEDLTRKITLPKDYDVEAKLDEMKEQLDEVEDIRVLLHTKPRLASGIPKKKPEI 159
Query: 92 -------------------LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
L V F+ G+ VD +T GKGF G +KR
Sbjct: 160 IECGIGGKSVEDKFEFARSLLGKEVNPADSFSDGEHVDTIAVTKGKGFQGPVKRFGVRIQ 219
Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK------- 185
S R GS G P R MAG+MG ++ T N +++ + D+
Sbjct: 220 YGKAARSSKARHVGSIGP-WTPARTMWTVAMAGQMGYHKRTEFNKKILRIADESQVDEVN 278
Query: 186 ------------RGLILVKGCVPGAKKNSWILVRDSFKS 212
G +++KG +PG K +++R + +
Sbjct: 279 PKGGFVKYGLIKNGYVMIKGSIPGPSKR-LVILRKAVRP 316
>gi|268323275|emb|CBH36863.1| 50S ribosomal protein L3P [uncultured archaeon]
Length = 315
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 52/270 (19%), Positives = 78/270 (28%), Gaps = 61/270 (22%)
Query: 4 GVVARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53
G K GMT + + IPVTV+ +V R Y + G
Sbjct: 40 GFAGYKAGMTHIILTDNVSHSMTKGMEIAIPVTVIETPPMRVEGFRL-----YKSTHYGK 94
Query: 54 GEAKVKNVSKPMRGFFSSVNVS------------------PKKKLFEFRVQKDDD----- 90
N + PKKK Q +
Sbjct: 95 QTVTEAYNDLSKIEELIKSNSTGLELRMISSTLPKAVNGVPKKKQEVMETQMGGEIGKDL 154
Query: 91 ----LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHG 146
+ + + F G VD T +T GKG G +KR A S R G
Sbjct: 155 KYAKEMLGKEISAKDIFNEGDFVDATAVTKGKGTQGPVKRWGITIQNAKARRSGKGRHVG 214
Query: 147 STGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-----------------DDKRGLI 189
+ G P RV G+ G + T N ++ + + +
Sbjct: 215 AIG-GWTPRRVRWRVPQLGQTGYQQRTEYNKRILKIGENGEEITPKGGFLNYGIVRNDYV 273
Query: 190 LVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
L+KG VPG KK + + + ++
Sbjct: 274 LLKGSVPGPKKR-LVRLSRAIRAPPKLDAP 302
>gi|71027797|ref|XP_763542.1| 50S ribosomal protein L3 [Theileria parva strain Muguga]
gi|68350495|gb|EAN31259.1| 50S ribosomal protein L3, putative [Theileria parva]
Length = 161
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 46/124 (37%), Positives = 65/124 (52%), Gaps = 2/124 (1%)
Query: 92 LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR 151
+G + S F VTG+T GKGF G +KRH F +HG S HR GS G
Sbjct: 36 YVLGQLVDVSSFVGCTHAKVTGITKGKGFQGTIKRHGFKRGPMSHG-SKHHRGPGSIGAS 94
Query: 152 QDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFK 211
PG V K+MAGRMGG R T + L+++ ++ + L+ +KG V G K S++ V +
Sbjct: 95 TTPGCVKPGKRMAGRMGGKRCTFRKLKILGLNPETSLLYLKGLVAGP-KGSYVTVTSDVQ 153
Query: 212 SAVN 215
+
Sbjct: 154 PPLK 157
>gi|322372168|ref|ZP_08046709.1| 50S ribosomal protein L3P [Haladaptatus paucihalophilus DX253]
gi|320548177|gb|EFW89850.1| 50S ribosomal protein L3P [Haladaptatus paucihalophilus DX253]
Length = 338
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 49/281 (17%), Positives = 81/281 (28%), Gaps = 73/281 (25%)
Query: 4 GVVARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRTLDKNGYMAVQVG- 52
G K GMT V + +PVT++ + V R + Y +
Sbjct: 41 GFAGYKAGMTHVVMVNDEANSPREGMEETVPVTIVETPPMRAVALRAYEDTPYGKKPMTE 100
Query: 53 -----AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRV---------------------- 85
+ + ++ P + + + V
Sbjct: 101 VWGSEFHDELDRTLNVPENHDADAAEDELRAAIEAGDVADLRVITHTVPSDLKNVPKKRP 160
Query: 86 -----------------QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128
+ L G F G+ +D +G+T GKG G +KR
Sbjct: 161 DVMETRVGGGSISDRADFALELLEDGGEHDITDVFRAGEYLDTSGVTKGKGTQGPVKRWG 220
Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV-------- 180
+ H R G+ G +P RV G+ G ++ T N ++
Sbjct: 221 VQKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVPQLGQTGYHQRTELNKRLISLGDDDEA 279
Query: 181 SVD--------DKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
SVD L+KG VPG K + R + +
Sbjct: 280 SVDGGFVNYGEVDGPYALIKGSVPGPNKR-LVRFRPAVRPT 319
>gi|76803057|ref|YP_331152.1| 50S ribosomal protein L3P [Natronomonas pharaonis DSM 2160]
gi|109893528|sp|Q3IMY8|RL3_NATPD RecName: Full=50S ribosomal protein L3P
gi|76558922|emb|CAI50518.1| ribosomal protein L3 [Natronomonas pharaonis DSM 2160]
Length = 336
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 55/278 (19%), Positives = 82/278 (29%), Gaps = 71/278 (25%)
Query: 4 GVVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53
G K GM+ V I +PVTV+ + V R + Y +
Sbjct: 41 GFAGYKAGMSHVVAINDEPNSPREGQEETVPVTVVETPPMRAVAVRAYEDTPYGKRPLTE 100
Query: 54 GEAKVKN-----------------------------------VSKPMRGFFSSV-NVSP- 76
+ ++ + G SSV P
Sbjct: 101 VWTDEVHEDLERSLSVPEEQSGDIEGDIRTALDEGALADVRVITHTVPGALSSVPKKEPD 160
Query: 77 -------KKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF 129
L + D + G F G+ DV G+T GKG G +KR
Sbjct: 161 VMETRVGGGSLSDRVDFALDLVDDGGEHTVTDVFRAGEYTDVAGITKGKGTQGPVKRWGV 220
Query: 130 GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV-----SVDD 184
+ H R G+ G +P RV G+ G ++ T N ++ V
Sbjct: 221 QKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVPQQGQTGYHQRTELNKRLIDLGDDDVSP 279
Query: 185 KRGLI----------LVKGCVPGAKKNSWILVRDSFKS 212
G + LVKG VPG K + R + +
Sbjct: 280 DGGFVNYGEVDGPYALVKGSVPGPDKR-LVRFRPAVRP 316
>gi|72387453|ref|XP_844151.1| ribosomal protein L3 mitochondrial [Trypanosoma brucei TREU927]
gi|62360659|gb|AAX81070.1| ribosomal protein L3 mitochondrial, putative [Trypanosoma brucei]
gi|70800683|gb|AAZ10592.1| ribosomal protein L3 mitochondrial, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|261327312|emb|CBH10288.1| ribosomal protein L3 mitochondrial, putative [Trypanosoma brucei
gambiense DAL972]
Length = 473
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 61/221 (27%), Positives = 88/221 (39%), Gaps = 14/221 (6%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKN-GYMAVQVGAGEAKVKN 60
R G+V K Y+ G + T + QVV H T + G V VGA V+
Sbjct: 137 RFGMVGVKAFTCKDYDELGNQFDCTAFWFPDNQVVKHSTRNGEVGTDKVYVGAMNVPVEF 196
Query: 61 VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
+ F+ + V K F + D PVG+ +F GQ V +T GF
Sbjct: 197 HKPHVAAFYKAAGVPVKHVCAGFPITP-DAYAPVGTKLDVRHFKPGQEVTITFQNTDYGF 255
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G M RH F G G S R G+ G + R++ +MAG+ G T + + V
Sbjct: 256 RGVMFRHGFDGGYVWLGDSRWQRRPGAMGT-EGQKRIYPGHRMAGQTGAAAETYQGVPVW 314
Query: 181 SVDDKRGLILVKGCVP---GAKKNSWILVRDSFKSAVNCKG 218
+D K LI + P A +++ D+ N KG
Sbjct: 315 RIDYKNSLIYL----PTLLDADVGTYVRFSDTI----NTKG 347
>gi|15825944|pdb|1JJ2|B Chain B, Fully Refined Crystal Structure Of The Haloarcula
Marismortui Large Ribosomal Subunit At 2.4 Angstrom
Resolution
gi|20150989|pdb|1KQS|B Chain B, The Haloarcula Marismortui 50s Complexed With A
Pretranslocational Intermediate In Protein Synthesis
gi|22218923|pdb|1K8A|D Chain D, Co-Crystal Structure Of Carbomycin A Bound To The 50s
Ribosomal Subunit Of Haloarcula Marismortui
gi|22218957|pdb|1K9M|D Chain D, Co-Crystal Structure Of Tylosin Bound To The 50s Ribosomal
Subunit Of Haloarcula Marismortui
gi|22219000|pdb|1KD1|D Chain D, Co-Crystal Structure Of Spiramycin Bound To The 50s
Ribosomal Subunit Of Haloarcula Marismortui
gi|22219327|pdb|1M1K|D Chain D, Co-Crystal Structure Of Azithromycin Bound To The 50s
Ribosomal Subunit Of Haloarcula Marismortui
gi|24159022|pdb|1M90|D Chain D, Co-Crystal Structure Of Cca-Phe-Caproic Acid-Biotin And
Sparsomycin Bound To The 50s Ribosomal Subunit
gi|34811119|pdb|1K73|D Chain D, Co-Crystal Structure Of Anisomycin Bound To The 50s
Ribosomal Subunit
gi|34811149|pdb|1KC8|D Chain D, Co-Crystal Structure Of Blasticidin S Bound To The 50s
Ribosomal Subunit
gi|34811188|pdb|1N8R|D Chain D, Structure Of Large Ribosomal Subunit In Complex With
Virginiamycin M
gi|34811218|pdb|1NJI|D Chain D, Structure Of Chloramphenicol Bound To The 50s Ribosomal
Subunit
gi|37927902|pdb|1Q7Y|D Chain D, Crystal Structure Of Ccdap-Puromycin Bound At The Peptidyl
Transferase Center Of The 50s Ribosomal Subunit
gi|37927937|pdb|1Q81|D Chain D, Crystal Structure Of Minihelix With 3' Puromycin Bound To
A- Site Of The 50s Ribosomal Subunit.
gi|37927973|pdb|1Q82|D Chain D, Crystal Structure Of Cc-Puromycin Bound To The A-Site Of
The 50s Ribosomal Subunit
gi|37928009|pdb|1Q86|D Chain D, Crystal Structure Of Cca-Phe-Cap-Biotin Bound
Simultaneously At Half Occupancy To Both The A-Site And
P- Site Of The The 50s Ribosomal Subunit.
gi|39654674|pdb|1QVF|B Chain B, Structure Of A Deacylated Trna Minihelix Bound To The E
Site Of The Large Ribosomal Subunit Of Haloarcula
Marismortui
gi|39654707|pdb|1QVG|B Chain B, Structure Of Cca Oligonucleotide Bound To The Trna Binding
Sites Of The Large Ribosomal Subunit Of Haloarcula
Marismortui
gi|55670537|pdb|1W2B|B Chain B, Trigger Factor Ribosome Binding Domain In Complex With 50s
gi|145580205|pdb|2OTL|B Chain B, Girodazole Bound To The Large Subunit Of Haloarcula
Marismortui
gi|228311913|pdb|3CXC|B Chain B, The Structure Of An Enhanced Oxazolidinone Inhibitor Bound
To The 50s Ribosomal Subunit Of H. Marismortui
gi|228312143|pdb|3G4S|B Chain B, Co-Crystal Structure Of Tiamulin Bound To The Large
Ribosomal Subunit
gi|228312199|pdb|3G6E|B Chain B, Co-Crystal Structure Of Homoharringtonine Bound To The
Large Ribosomal Subunit
gi|228312235|pdb|3G71|B Chain B, Co-Crystal Structure Of Bruceantin Bound To The Large
Ribosomal Subunit
Length = 337
Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 51/280 (18%), Positives = 76/280 (27%), Gaps = 73/280 (26%)
Query: 4 GVVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53
G K GMT V + +PVTV+ + V R + Y +
Sbjct: 40 GFAGYKAGMTHVVLVNDEPNSPREGMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTE 99
Query: 54 GEAKVKN-----VSKPMRGFFSSVNVS----------------------------PKKKL 80
+ PKKK
Sbjct: 100 VWTDEFHSELDRTLDVPEDHDPDAAEEQIRDAHEAGDLGDLRLITHTVPDAVPSVPKKKP 159
Query: 81 ------------FEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128
+ D + G F G+ DV G+T GKG G +KR
Sbjct: 160 DVMETRVGGGSVSDRLDHALDIVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWG 219
Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------ 182
+ H R G+ G +P RV G+ G ++ T N ++ +
Sbjct: 220 VQKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEP 278
Query: 183 ----------DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+ LVKG VPG K + R + +
Sbjct: 279 TVDGGFVNYGEVDGPYTLVKGSVPGPDKR-LVRFRPAVRP 317
>gi|148642822|ref|YP_001273335.1| 50S ribosomal protein L3P [Methanobrevibacter smithii ATCC 35061]
gi|222445053|ref|ZP_03607568.1| hypothetical protein METSMIALI_00670 [Methanobrevibacter smithii
DSM 2375]
gi|261350378|ref|ZP_05975795.1| ribosomal protein L3 [Methanobrevibacter smithii DSM 2374]
gi|166233159|sp|A5UL89|RL3_METS3 RecName: Full=50S ribosomal protein L3P
gi|148551839|gb|ABQ86967.1| ribosomal protein L3p [Methanobrevibacter smithii ATCC 35061]
gi|222434618|gb|EEE41783.1| hypothetical protein METSMIALI_00670 [Methanobrevibacter smithii
DSM 2375]
gi|288861161|gb|EFC93459.1| ribosomal protein L3 [Methanobrevibacter smithii DSM 2374]
Length = 336
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 52/284 (18%), Positives = 82/284 (28%), Gaps = 71/284 (25%)
Query: 4 GVVARKLGMTC-VYNIEGRR---------IPVTVLHLDNCQVVVHRTLDKN--------- 44
G+ K+GMT + + PVTVL + V+ R +K
Sbjct: 40 GLAGYKVGMTHALVTDSDKNSPTNGMDVFTPVTVLEVPPVVVMGIRAYEKTSRGLKVITE 99
Query: 45 ------------------GYMAVQ---------VGAGEAKVKNVSKPMRGFFSSVNVSPK 77
Y + + KV + P
Sbjct: 100 VLADNLDEELSRKISLPKEYNKSEAIAKIQGVLDKTEDIKVLVHTNPKVTSVPKKKPDIF 159
Query: 78 KKLFEFRVQKD----DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLR 133
+ ++ L V + GQ VD T GKGF G +KR
Sbjct: 160 ECGIGGANPEEKLNTALELLGNEVKASDILNEGQFVDAIATTKGKGFQGVVKRWGIRIQY 219
Query: 134 ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV----------- 182
+ R GS G P R AG+MG ++ T N +++ +
Sbjct: 220 GKAVRAGKGRHVGSIGP-WTPSRTMWTVAQAGQMGYHKRTEFNKKILKIASADEVDQINP 278
Query: 183 --------DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
K +LVKG +PG K +++R + +
Sbjct: 279 DGGFVKYGLVKNDYVLVKGSLPGPSKR-LVILRQPIRPNNKSED 321
>gi|27066406|pdb|1FFK|B Chain B, Crystal Structure Of The Large Ribosomal Subunit From
Haloarcula Marismortui At 2.4 Angstrom Resolution
Length = 337
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 51/279 (18%), Positives = 75/279 (26%), Gaps = 71/279 (25%)
Query: 4 GVVARKLGMTCVYNIEGR---------RIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG 54
G K GMT V + +PVTV+ + V R + Y +
Sbjct: 40 GFAGYKAGMTHVVLVNDEPNSPREGMETVPVTVIETPPMRAVALRAYEDTPYGQRPLTEV 99
Query: 55 EAKVKN-----VSKPMRGFFSSVNVS----------------------------PKKKL- 80
+ PKKK
Sbjct: 100 WTDEFHSELDRTLDVPEDHDPDAAEEQIRDAHEAGDLGDLRLITHTVPDAVPSVPKKKPD 159
Query: 81 -----------FEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF 129
+ D + G F G+ DV G+T GKG G +KR
Sbjct: 160 VMETRVGGGSVSDRLDHALDIVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWGV 219
Query: 130 GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------- 182
+ H R G+ G +P RV G+ G ++ T N ++ +
Sbjct: 220 QKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEPT 278
Query: 183 ---------DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+ LVKG VPG K R + +
Sbjct: 279 VDGGFVNYGEVDGPYTLVKGSVPGPDKRLVPFFRPAVRP 317
>gi|55378384|ref|YP_136234.1| 50S ribosomal protein L3P [Haloarcula marismortui ATCC 43049]
gi|57015335|sp|P20279|RL3_HALMA RecName: Full=50S ribosomal protein L3P; AltName: Full=Hl1;
AltName: Full=Hmal3
gi|50513471|pdb|1S72|B Chain B, Refined Crystal Structure Of The Haloarcula Marismortui
Large Ribosomal Subunit At 2.4 Angstrom Resolution
gi|66360785|pdb|1YHQ|B Chain B, Crystal Structure Of Azithromycin Bound To The G2099a
Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
gi|66360818|pdb|1YI2|B Chain B, Crystal Structure Of Erythromycin Bound To The G2099a
Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
gi|66360851|pdb|1YIJ|B Chain B, Crystal Structure Of Telithromycin Bound To The G2099a
Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
gi|66360884|pdb|1YIT|B Chain B, Crystal Structure Of Virginiamycin M And S Bound To The
50s Ribosomal Subunit Of Haloarcula Marismortui
gi|66360917|pdb|1YJ9|B Chain B, Crystal Structure Of The Mutant 50s Ribosomal Subunit Of
Haloarcula Marismortui Containing A Three Residue
Deletion In L22
gi|66360950|pdb|1YJN|B Chain B, Crystal Structure Of Clindamycin Bound To The G2099a
Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
gi|66360983|pdb|1YJW|B Chain B, Crystal Structure Of Quinupristin Bound To The G2099a
Mutant 50s Ribosomal Subunit Of Haloarcula Marismortui
gi|83753127|pdb|1VQ4|B Chain B, The Structure Of The Transition State Analogue "daa" Bound
To The Large Ribosomal Subunit Of Haloarcula Marismortui
gi|83753159|pdb|1VQ5|B Chain B, The Structure Of The Transition State Analogue "raa" Bound
To The Large Ribosomal Subunit Of Haloarcula Marismortui
gi|83753191|pdb|1VQ6|B Chain B, The Structure Of C-Hpmn And Cca-Phe-Cap-Bio Bound To The
Large Ribosomal Subunit Of Haloarcula Marismortui
gi|83753223|pdb|1VQ7|B Chain B, The Structure Of The Transition State Analogue "dca" Bound
To The Large Ribosomal Subunit Of Haloarcula Marismortui
gi|83753254|pdb|1VQ8|B Chain B, The Structure Of Ccda-Phe-Cap-Bio And The Antibiotic
Sparsomycin Bound To The Large Ribosomal Subunit Of
Haloarcula Marismortui
gi|83753286|pdb|1VQ9|B Chain B, The Structure Of Cca-Phe-Cap-Bio And The Antibiotic
Sparsomycin Bound To The Large Ribosomal Subunit Of
Haloarcula Marismortui
gi|83753317|pdb|1VQK|B Chain B, The Structure Of Ccda-Phe-Cap-Bio Bound To The A Site Of
The Ribosomal Subunit Of Haloarcula Marismortui
gi|83753348|pdb|1VQL|B Chain B, The Structure Of The Transition State Analogue "dcsn"
Bound To The Large Ribosomal Subunit Of Haloarcula
Marismortui
gi|83753379|pdb|1VQM|B Chain B, The Structure Of The Transition State Analogue "dan" Bound
To The Large Ribosomal Subunit Of Haloarcula Marismortui
gi|83753411|pdb|1VQN|B Chain B, The Structure Of Cc-Hpmn And Cca-Phe-Cap-Bio Bound To The
Large Ribosomal Subunit Of Haloarcula Marismortui
gi|83753442|pdb|1VQO|B Chain B, The Structure Of Ccpmn Bound To The Large Ribosomal
Subunit Haloarcula Marismortui
gi|83753474|pdb|1VQP|B Chain B, The Structure Of The Transition State Analogue "rap" Bound
To The Large Ribosomal Subunit Of Haloarcula Marismortui
gi|145580174|pdb|2OTJ|B Chain B, 13-Deoxytedanolide Bound To The Large Subunit Of
Haloarcula Marismortui
gi|171848838|pdb|2QA4|B Chain B, A More Complete Structure Of The The L7L12 STALK OF THE
Haloarcula Marismortui 50s Large Ribosomal Subunit
gi|188596003|pdb|3CC2|B Chain B, The Refined Crystal Structure Of The Haloarcula
Marismortui Large Ribosomal Subunit At 2.4 Angstrom
Resolution With Rrna Sequence For The 23s Rrna And
Genome-Derived Sequences For R-Proteins
gi|188596034|pdb|3CC4|B Chain B, Co-Crystal Structure Of Anisomycin Bound To The 50s
Ribosomal Subunit
gi|188596065|pdb|3CC7|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation C2487u
gi|188596096|pdb|3CCE|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation U2535a
gi|188596127|pdb|3CCJ|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation C2534u
gi|188596158|pdb|3CCL|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation U2535c. Density For Anisomycin Is
Visible But Not Included In Model.
gi|188596189|pdb|3CCM|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation G2611u
gi|188596220|pdb|3CCQ|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation A2488u
gi|188596251|pdb|3CCR|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation A2488c. Density For Anisomycin Is
Visible But Not Included In The Model.
gi|188596282|pdb|3CCS|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation G2482a
gi|188596313|pdb|3CCU|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation G2482c
gi|188596344|pdb|3CCV|B Chain B, Structure Of Anisomycin Resistant 50s Ribosomal Subunit:
23s Rrna Mutation G2616a
gi|188596375|pdb|3CD6|B Chain B, Co-Cystal Of Large Ribosomal Subunit Mutant G2616a With
Cc- Puromycin
gi|194368706|pdb|3CPW|B Chain B, The Structure Of The Antibiotic Linezolid Bound To The
Large Ribosomal Subunit Of Haloarcula Marismortui
gi|206581909|pdb|3CMA|B Chain B, The Structure Of Cca And Cca-Phe-Cap-Bio Bound To The
Large Ribosomal Subunit Of Haloarcula Marismortui
gi|206581942|pdb|3CME|B Chain B, The Structure Of Ca And Cca-Phe-Cap-Bio Bound To The Large
Ribosomal Subunit Of Haloarcula Marismortui
gi|208435496|pdb|2QEX|B Chain B, Negamycin Binds To The Wall Of The Nascent Chain Exit
Tunnel Of The 50s Ribosomal Subunit
gi|290790037|pdb|3I55|B Chain B, Co-Crystal Structure Of Mycalamide A Bound To The Large
Ribosomal Subunit
gi|290790068|pdb|3I56|B Chain B, Co-Crystal Structure Of Triacetyloleandomcyin Bound To The
Large Ribosomal Subunit
gi|55231109|gb|AAV46528.1| 50S ribosomal protein L3 [Haloarcula marismortui ATCC 43049]
Length = 338
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 51/280 (18%), Positives = 76/280 (27%), Gaps = 73/280 (26%)
Query: 4 GVVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53
G K GMT V + +PVTV+ + V R + Y +
Sbjct: 41 GFAGYKAGMTHVVLVNDEPNSPREGMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTE 100
Query: 54 GEAKVKNVS-----KPMRGFFSSVNVS----------------------------PKKKL 80
+ PKKK
Sbjct: 101 VWTDEFHSELDRTLDVPEDHDPDAAEEQIRDAHEAGDLGDLRLITHTVPDAVPSVPKKKP 160
Query: 81 ------------FEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128
+ D + G F G+ DV G+T GKG G +KR
Sbjct: 161 DVMETRVGGGSVSDRLDHALDIVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWG 220
Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------ 182
+ H R G+ G +P RV G+ G ++ T N ++ +
Sbjct: 221 VQKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEP 279
Query: 183 ----------DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+ LVKG VPG K + R + +
Sbjct: 280 TVDGGFVNYGEVDGPYTLVKGSVPGPDKR-LVRFRPAVRP 318
>gi|307720136|ref|YP_003891276.1| 50S ribosomal protein L3P [Sulfurimonas autotrophica DSM 16294]
gi|306978229|gb|ADN08264.1| LSU ribosomal protein L3P [Sulfurimonas autotrophica DSM 16294]
Length = 191
Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 61/195 (31%), Positives = 88/195 (45%), Gaps = 16/195 (8%)
Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
+ K+GM+ + + PVT+L + + +V G V +G+ ++K +
Sbjct: 4 IVEKIGMSRTITVPSK--PVTLLRVLDAKVCEV----NEGTAIVAYNSGKK----MNKAI 53
Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
G N+ R + + V T T G+GFSGAMK
Sbjct: 54 EGQQKKYNLP----TEFNRFVTLEVANAEAGDLDLAPLADASAVKTTFNTKGRGFSGAMK 109
Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
R NFGG A+HG R+ GS G + PGRV K KKM G+ G + +VKN E+VS D +
Sbjct: 110 RWNFGGGPASHGHRFGRRT-GSIGNAEWPGRVMKGKKMPGQYGNTQNSVKN-EIVSFDAE 167
Query: 186 RGLILVKGCVPGAKK 200
+I V G V GA
Sbjct: 168 NKIIAVLGSVSGANG 182
>gi|154150075|ref|YP_001403693.1| 50S ribosomal protein L3P [Candidatus Methanoregula boonei 6A8]
gi|166233155|sp|A7I5N9|RL3_METB6 RecName: Full=50S ribosomal protein L3P
gi|153998627|gb|ABS55050.1| ribosomal protein L3 [Methanoregula boonei 6A8]
Length = 337
Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 49/279 (17%), Positives = 85/279 (30%), Gaps = 74/279 (26%)
Query: 4 GVVARKLGMTCVYNIE--------GR--RIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53
G K+GMT V ++ G+ +PVT++ + +V R K+ Y +
Sbjct: 41 GFAGYKVGMTHVLMVDDHKDSPTEGKEIMVPVTIIEIPTMKVAALRVYTKDTYGKHALTE 100
Query: 54 GEAKVKNVSKPMRGFFSSVNVS--------------------PKKKLFEFRVQKDDDLLP 93
A+ + R S + +P
Sbjct: 101 IWAEPLDSQLSRRVTSPKNYDSTAAKKKYSDALAAGLVAEIYALAYTQPATMSGVPKKVP 160
Query: 94 VGSVFSP-----------------------SYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130
+ G D+T +TIGKG G +KR
Sbjct: 161 DLMEIKVAGGDIAKQYEYAFGLLGKEIRLSNVIETGAYADITAITIGKGTQGPVKRWGVT 220
Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRG--- 187
+ H V R G+ G +P V +G+MG + T N ++ + + G
Sbjct: 221 LRKRKHSVGGKERHVGTLGP-WNPHHVRWEVPQSGQMGYQQRTEFNKRILKI-GENGAEI 278
Query: 188 ---------------LILVKGCVPGAKKNSWILVRDSFK 211
+++KG +PG K I +R + +
Sbjct: 279 TPAGGFLNYGVIRNAYVVIKGSIPGPAKR-LIRIRPAIR 316
>gi|20089942|ref|NP_616017.1| 50S ribosomal protein L3P [Methanosarcina acetivorans C2A]
gi|42559661|sp|Q8TRU7|RL3_METAC RecName: Full=50S ribosomal protein L3P
gi|19914903|gb|AAM04497.1| ribosomal protein L3p [Methanosarcina acetivorans C2A]
Length = 337
Score = 98.1 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 58/287 (20%), Positives = 93/287 (32%), Gaps = 72/287 (25%)
Query: 5 VVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKN--GYMAVQVG 52
K+GMT V ++ +PVTV+ +V R ++ G A+
Sbjct: 42 FAGYKVGMTHVIMVDDTKNSLTQGMEISVPVTVIETPAIRVAAIRAYAEDSTGEKAIAEV 101
Query: 53 A----GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVF---------- 98
+ + P G + + K + E RV ++
Sbjct: 102 WAADLDPELKRRIPIPAAGNQAEALENIGKLIEEGRVSDVRAVIYTLPKSLTGVPKKVPD 161
Query: 99 ---------------------------SPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
F G LVD +TIGKG G +KR
Sbjct: 162 IMESGISARDLGTKFEYSKTILGTLVSVTDVFKNGTLVDTAAITIGKGTQGPVKRWGIQL 221
Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV--DDKR--- 186
++ H S R G+ G +P RV G+MG ++ T N ++ + D +
Sbjct: 222 MKGKHSRQGSLRQVGTLGAF-NPSRVSWRVPQMGQMGYHQRTEFNKRILKIGSDGEEVTP 280
Query: 187 ------------GLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
IL+KG VPG K I +RD ++ G+ +
Sbjct: 281 EGGFINYGLVRGDYILIKGSVPGPSKR-LIRLRDPIRAKKADLGEPN 326
>gi|330508498|ref|YP_004384926.1| 50S ribosomal protein L3 [Methanosaeta concilii GP-6]
gi|328929306|gb|AEB69108.1| ribosomal protein L3 [Methanosaeta concilii GP-6]
Length = 334
Score = 97.8 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 56/281 (19%), Positives = 85/281 (30%), Gaps = 73/281 (25%)
Query: 4 GVVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53
G K GMT V I+ R PVTVL + VV R + Y A
Sbjct: 40 GFAGYKAGMTHVMMIDDRPRSLTEGMEISTPVTVLEVPPMNVVAVRAYES--YNGGLRPA 97
Query: 54 GEAKVKNVSKPMRGFFS------------------------------------------S 71
GE +N+S + +
Sbjct: 98 GELWAENLSPELSRAMTVPKKTRGTAPGDLVALGDDIADVRVLVHTNPTLVSGIPKKVPE 157
Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
+ P L V S F +G L+D + +T GKG G ++R
Sbjct: 158 IMEMPINGGSMNDRLSFAQTLLGQQVPISSVFELGDLMDTSAVTKGKGTQGPVRRWGIAM 217
Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK------ 185
+ H + R G+ G P + G+MG ++ T N ++ +
Sbjct: 218 AKRKHARTGKVRHVGNLGP-WHPAHISWRVPQLGQMGYHQRTEYNKRLMFIGTDGSKITP 276
Query: 186 -----------RGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
IL+KG VPG K + +R + + N
Sbjct: 277 DGGFPGYGVIKNQYILIKGSVPGPIKR-LVRMRHAMRPGKN 316
>gi|257053359|ref|YP_003131192.1| 50S ribosomal protein L3P [Halorhabdus utahensis DSM 12940]
gi|256692122|gb|ACV12459.1| ribosomal protein L3 [Halorhabdus utahensis DSM 12940]
Length = 338
Score = 97.8 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 46/281 (16%), Positives = 78/281 (27%), Gaps = 75/281 (26%)
Query: 4 GVVARKLGMTCVY---NIEG-------RRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53
G K GM+ V + +PVTV+ + V R + Y +
Sbjct: 41 GFAGYKAGMSHVVVINDEPNSPREGMEETVPVTVVETPPMRAVALRAYEDTPYGLRPLTE 100
Query: 54 GEAKVKN------------------------------------VSKPMRGFFSSVNVSPK 77
+ ++ + G K
Sbjct: 101 VWTDEFHEDLDRAIDLPAEQDRDGAEAQIRDALDAGRLGDVRLITHTVPGDLP-SVPKNK 159
Query: 78 KKLFEFRVQKDDDLLPVGSVFSP----------SYFTVGQLVDVTGMTIGKGFSGAMKRH 127
+ E RV + F G+ DV G+T GKG G +KR
Sbjct: 160 PDVMETRVGGGSLADRLEHGLELVADGGEYAMTDVFRAGEYADVAGVTKGKGTQGPVKRW 219
Query: 128 NFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV----- 182
+ H R G+ G +P RV G+ G ++ T N ++
Sbjct: 220 GVQKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVPQQGQTGYHQRTELNKRLIDFGDEDD 278
Query: 183 -----------DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+ + L+KG +PG + +R + +
Sbjct: 279 VTPDGGFVNYGEVEGNYALIKGSIPGPDSR-LVRLRPAVRP 318
>gi|21228226|ref|NP_634148.1| 50S ribosomal protein L3P [Methanosarcina mazei Go1]
gi|42559655|sp|Q8PV50|RL3_METMA RecName: Full=50S ribosomal protein L3P
gi|20906682|gb|AAM31820.1| LSU ribosomal protein L3P [Methanosarcina mazei Go1]
Length = 337
Score = 97.8 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 59/287 (20%), Positives = 93/287 (32%), Gaps = 72/287 (25%)
Query: 5 VVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHR--TLDKNGYMAVQVG 52
K+GMT V ++ +PVTV+ +V R T D G A+
Sbjct: 42 FAGYKVGMTHVIMVDDIKNSLTQGMEISVPVTVIETPAIRVAAVRAYTEDSTGEKAIAEA 101
Query: 53 A----GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQ---------------------- 86
+ + P G + + K + E RV
Sbjct: 102 WAADLDSELKRRIPIPAAGNQAEGLENIGKLIEEGRVSDIRAVTYTLPKSLTGVPKKVPD 161
Query: 87 ---------------KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
+ + V F G +VD +TIGKG G +KR
Sbjct: 162 IMESGISAKDLGAKFEYAKSILGNLVNVTDVFKNGTVVDTAAITIGKGTQGPVKRWGIQL 221
Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV--DDKR--- 186
+ H S R G+ G +P RV G+MG ++ T N ++ + D +
Sbjct: 222 QKGKHSRQGSLRQIGTLGSF-NPSRVSWRVPQMGQMGYHQRTEFNKRILKIGSDGEEVTP 280
Query: 187 ------------GLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
+L+KG VPG K I +RD ++ G+ +
Sbjct: 281 EGGFINYGLVRGDYVLIKGSVPGPSKR-LIRLRDPIRAKKADLGEPN 326
>gi|222480857|ref|YP_002567094.1| ribosomal protein L3 [Halorubrum lacusprofundi ATCC 49239]
gi|222453759|gb|ACM58024.1| ribosomal protein L3 [Halorubrum lacusprofundi ATCC 49239]
Length = 338
Score = 97.8 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 55/282 (19%), Positives = 79/282 (28%), Gaps = 77/282 (27%)
Query: 4 GVVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKNGYMAV---- 49
G K GMT V + +PVTV+ V R ++ Y
Sbjct: 41 GFAGYKAGMTHVVMVNDEANSPREGMETSVPVTVVETPPMYAVALRAYEQTPYGKKPVEE 100
Query: 50 --QVGAGEAKVKNVSKPMRGFFSS-----------------------------VNVSPKK 78
E + + P F K
Sbjct: 101 VWATEFHEELDRALDLPAEDTFEEDADELRALLDEGAVDDVRVITHTVPSELANVPKKKP 160
Query: 79 KLFEFRVQKDDDLLPVGSVFSP----------SYFTVGQLVDVTGMTIGKGFSGAMKRHN 128
+ E RV V F GQ DV+G+T GKG G +KR
Sbjct: 161 DVMETRVGGGSLEERVDFGLDLVAEGGAHEFGDVFRAGQYTDVSGITKGKGTQGPVKRWG 220
Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS------- 181
+ H R G+ G +P RV G+ G ++ T N ++
Sbjct: 221 VQKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVPQQGQTGYHQRTELNKRLIDFGEGDDA 279
Query: 182 -----------VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + L+KG +PG K I R + +
Sbjct: 280 SVDGGFVNYGEVDGE--YALIKGSLPGPDKR-LIRFRPAIRP 318
>gi|148801|gb|AAA86859.1| ribosomal protein L3 [Haloarcula marismortui]
Length = 338
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 51/280 (18%), Positives = 76/280 (27%), Gaps = 73/280 (26%)
Query: 4 GVVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53
G K GMT V + +PVTV+ + V R + Y +
Sbjct: 41 GFAGYKAGMTHVVLVNDEPNSPREGMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTE 100
Query: 54 GEAKVKN-----VSKPMRGFFSSVNVS----------------------------PKKKL 80
+ PKKK
Sbjct: 101 VWTDEFHSELDRTLDVPEDHDPDAAEEQIRDAHEAGDLGDLRLITHTVPDAVPSVPKKKP 160
Query: 81 ------------FEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128
+ D + G F G+ DV G+T GKG G +KR
Sbjct: 161 DVMETRVGGGSVSDRLDHALDIVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWG 220
Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------ 182
+ H R G+ G +P RV G+ G ++ T N ++ +
Sbjct: 221 VQKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEP 279
Query: 183 ----------DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+ LVKG VPG K + R + +
Sbjct: 280 TVDGGFVNYGEVDGPYTLVKGSVPGPDKR-LVPFRPAVRP 318
>gi|147919334|ref|YP_686930.1| 50S ribosomal protein L3P [uncultured methanogenic archaeon RC-I]
gi|121685298|sp|Q0W1Y9|RL3_UNCMA RecName: Full=50S ribosomal protein L3P
gi|110622326|emb|CAJ37604.1| 50S ribosomal protein L3P [uncultured methanogenic archaeon RC-I]
Length = 337
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 50/285 (17%), Positives = 84/285 (29%), Gaps = 74/285 (25%)
Query: 4 GVVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53
G V K GM+ + ++ R +PVT++ V R D + Y +G
Sbjct: 41 GFVGFKAGMSHIVMVDDRPHSATEGMEISVPVTIVEAPQMHVAGIRVYDDSPYGKKVIGE 100
Query: 54 GEAKVKNVSKPMRGFFSSVNVS----------------------------------PKKK 79
+ PKK
Sbjct: 101 AWISDLKM-LESLTHLPKNGYKTDEQLAKIAELVKKGVVADLRVMTVTLTSEVSGIPKKV 159
Query: 80 LFEFRV----------QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF 129
+ L +V F G+LVDV+ +T G G G + R
Sbjct: 160 PELMENRIAGGDMAKRFEFAKSLMGKAVGIKDVFAPGELVDVSAITKGYGTQGPVVRWGI 219
Query: 130 GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK---- 185
+ H + R G+ G +P R+ G+ G ++ T N ++ + DK
Sbjct: 220 ATQKRKHARTGKKRHVGNLGP-WNPHRIRWQVPQLGQTGYHQRTEYNKRILKMGDKAEEI 278
Query: 186 -------------RGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
I++KG +PG K + +R + + K
Sbjct: 279 TPAGGFLHYGLIRNDYIMLKGSIPGPVKR-MVRIRPAVRPKNMPK 322
>gi|119719148|ref|YP_919643.1| 50S ribosomal protein L3P [Thermofilum pendens Hrk 5]
gi|119524268|gb|ABL77640.1| LSU ribosomal protein L3P [Thermofilum pendens Hrk 5]
Length = 334
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 51/278 (18%), Positives = 85/278 (30%), Gaps = 72/278 (25%)
Query: 4 GVVARKLGMTCV----------YNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53
G K+GM V + + R TV+ + +VV R +K Y +
Sbjct: 39 GFAGYKVGMLHVIGVEMNKNSPFYGQERFYAATVIEVPPLKVVAVRVYEKTPYGKKTLCE 98
Query: 54 GEAK----------VKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDD------------- 90
AK + K ++ E RV
Sbjct: 99 VWAKDLPKDLERVFPLPKDQSYHEEQLKKLEEVKSRVSEVRVLAATQPRLSGLGKKKPEL 158
Query: 91 -----------------LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLR 133
+ F G +DV +T GKGF G++KR +
Sbjct: 159 IEIAVGGPPEKALSLALEKLGKDLTISDVFKEGDYIDVIAVTKGKGFQGSVKRFGVEEMP 218
Query: 134 ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-DDK------- 185
H H GS G ++ + G++G ++ T N ++ V D +
Sbjct: 219 RWHKHRKGHSRIGSVGPQKPA--IMFYTPFPGQLGFHQRTEYNKRILKVGDAESLKEINP 276
Query: 186 -----------RGLILVKGCVPGAKKNSWILVRDSFKS 212
I+V+G VPGA K + +R + ++
Sbjct: 277 PGGWPHYGLVRSQFIIVEGSVPGAVKR-LVRLRHAIRA 313
>gi|14278035|pdb|1GIY|E Chain E, Crystal Structure Of The Ribosome At 5.5 A Resolution.
This File, 1giy, Contains The 50s Ribosome Subunit. The
30s Ribosome Subunit, Three Trna, And Mrna Molecules Are
In The File 1gix
gi|28373724|pdb|1ML5|EE Chain e, Structure Of The E. Coli Ribosomal Termination Complex
With Release Factor 2
gi|66361021|pdb|1YL3|E Chain E, Crystal Structure Of 70s Ribosome With Thrs Operator And
Trnas. Large Subunit. The Coordinates For The Small
Subunit Are In The Pdb Entry 1yl4.
gi|88192261|pdb|2B66|E Chain E, 50s Ribosomal Subunit From A Crystal Structure Of Release
Factor Rf1, Trnas And Mrna Bound To The Ribosome. This
File Contains The 50s Subunit From A Crystal Structure
Of Release Factor Rf1, Trnas And Mrna Bound To The
Ribosome And Is Described In Remark 400
gi|88192324|pdb|2B9N|E Chain E, 50s Ribosomal Subunit From A Crystal Structure Of Release
Factor Rf2, Trnas And Mrna Bound To The Ribosome. This
File Contains The 50s Subunit From A Crystal Structure
Of Release Factor Rf1, Trnas And Mrna Bound To The
Ribosome And Is Described In Remark 400.
gi|88192379|pdb|2B9P|E Chain E, 50s Ribosomal Subunit From A Crystal Structure Of The
Ribosome In Complex With Trnas And Mrna With A Stop
Codon In The A-Site. This File Contains The 50s Subunit
From A Crystal Structure Of The Ribosome In Complex With
Trnas And Mrna With A Stop Codon In The A-Site And Is
Described In Remark 400
Length = 338
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 48/280 (17%), Positives = 79/280 (28%), Gaps = 72/280 (25%)
Query: 4 GVVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53
G K GMT V + +PVTV+ + V R + Y +
Sbjct: 40 GFAGYKAGMTHVVLVNDEPNSPREGMEETVPVTVIETPPMRAVALRAYEDTPYGQRPLTE 99
Query: 54 GEAKVKN--VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSY--------- 102
+ + + + + ++ + D L + + P
Sbjct: 100 VWTDEFHSELDRTLSDRLDHALDIVEDQIRDAHEAGDLGDLRLITHTVPDAVPSVPKKKP 159
Query: 103 ----------------------------------FTVGQLVDVTGMTIGKGFSGAMKRHN 128
F G+ DV G+T GKG G +KR
Sbjct: 160 DVMETRVGGGSVSDRLDHALDIVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVKRWG 219
Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------ 182
+ H R G+ G +P RV G+ G ++ T N ++ +
Sbjct: 220 VQKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEGDEP 278
Query: 183 ----------DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+ LVKG VPG K R + +
Sbjct: 279 TVDGGFVNYGEVDGPYTLVKGSVPGPDKRLVPFFRPAVRP 318
>gi|124028157|ref|YP_001013477.1| 50S ribosomal protein L3P [Hyperthermus butylicus DSM 5456]
gi|123978851|gb|ABM81132.1| 50S ribosomal protein L3P [Hyperthermus butylicus DSM 5456]
Length = 319
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 56/293 (19%), Positives = 78/293 (26%), Gaps = 82/293 (27%)
Query: 5 VVARKLGMTCVY---NIEGRR-------IPVTVLHLDNCQVVVHRTLDKN---------- 44
+A K+GMT VY + G +PVTVL V R +
Sbjct: 17 FLAYKVGMTHVYVIDDEPGSITHGREIFMPVTVLEAPPMVVTAVRVYGYDPNIGLYTLSE 76
Query: 45 ----------GYMAVQV------------------------GAGEAKVKNVSKPMRGFFS 70
Y + + G S
Sbjct: 77 AWAQPETLVEKYNLDIYRVVPRLRFPDPDKAVKKLEGLLDKVYDVRIIAATQPRLVGGLS 136
Query: 71 SVNVSPKKKLFEFRVQKDDDLLPVGSVF-----SPSYFTVGQLVDVTGMTIGKGFSGAMK 125
+ +D + F GQ VDV +T GKGF G +K
Sbjct: 137 KKKPDLLEIKIGGGSSIEDRFNYAVKLLGSELKVSDVFREGQFVDVIAVTKGKGFQGVIK 196
Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
R L H RS T + G+MG +R T N ++ +
Sbjct: 197 RFGVKELPRWHKHRKGSRSGPGTRGPATSFS-WSEVPQPGQMGFHRRTEYNKRILKI-GD 254
Query: 186 RGL------------------ILVKGCVPGAKKNSWIL---VRDSFKSAVNCK 217
GL IL+ G +PG K +L VR + K
Sbjct: 255 NGLEITPAGGFLHYGIVRSTYILLAGSIPGTPKRPIVLRHPVRPRWMPEAPPK 307
>gi|237751236|ref|ZP_04581716.1| 50S ribosomal protein L3 [Helicobacter bilis ATCC 43879]
gi|229372602|gb|EEO22993.1| 50S ribosomal protein L3 [Helicobacter bilis ATCC 43879]
Length = 197
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 62/196 (31%), Positives = 95/196 (48%), Gaps = 15/196 (7%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
+ +K+GM+ + + VT+L + N +V ++NG V G+ K++
Sbjct: 3 FIVQKVGMSRIIATPSQA--VTLLKVLNAKVCKL---EENGKALVAYSKGKTCNKSIEGN 57
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+ + S + L + D S + G++V T G+GFSGAM
Sbjct: 58 QKKYNLSKEFNRFATLKVANTEVGD--------LDMSSLSDGKVVKAGFKTKGRGFSGAM 109
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR NF G A HG S HR GS G R+ PGRV KKMAG G V+V++ E++S D
Sbjct: 110 KRWNFQGGPAAHG-SRFHRRLGSIGNREWPGRVQPGKKMAGHYGDEIVSVRS-EIISFDT 167
Query: 185 KRGLILVKGCVPGAKK 200
+ G++++KG V G
Sbjct: 168 QSGILVLKGSVAGYNG 183
>gi|300710375|ref|YP_003736189.1| 50S ribosomal protein L3P [Halalkalicoccus jeotgali B3]
gi|299124058|gb|ADJ14397.1| 50S ribosomal protein L3P [Halalkalicoccus jeotgali B3]
Length = 337
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 49/279 (17%), Positives = 80/279 (28%), Gaps = 72/279 (25%)
Query: 4 GVVARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53
G K GM+ V + +PVT++ + V R ++ Y G
Sbjct: 41 GFAGYKAGMSHVVMVNDEANSPLEGTEQTVPVTIVETPPMRAVALRAYEQTAYGMQPRGE 100
Query: 54 GEAKVKN------------VSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS 101
A+ + R + K L P
Sbjct: 101 VWAEEFDDELDRALDLPSEADPSARDDLETALEEGKVDDLRVITHTSPASLRGVPKKKPD 160
Query: 102 YFT--------------------------------VGQLVDVTGMTIGKGFSGAMKRHNF 129
G+ +DV+G+T GKG G +KR
Sbjct: 161 VMETRVGGGSLAERAEFAFGLLDEGGEHEATDVFRAGEYLDVSGVTKGKGTQGPVKRWGV 220
Query: 130 GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV------SVD 183
+ H R G+ G +P RV G+ G ++ T N ++ V+
Sbjct: 221 QKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVPQQGQTGYHQRTELNKRLLALGEEDDVN 279
Query: 184 DKRGLI----------LVKGCVPGAKKNSWILVRDSFKS 212
GL+ L+KG +PG K + R + +
Sbjct: 280 PDGGLVNYGEVSGPYTLIKGSLPGPDKR-VLRFRPAIRP 317
>gi|312137075|ref|YP_004004412.1| lsu ribosomal protein l3p [Methanothermus fervidus DSM 2088]
gi|311224794|gb|ADP77650.1| LSU ribosomal protein L3P [Methanothermus fervidus DSM 2088]
Length = 333
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 59/283 (20%), Positives = 91/283 (32%), Gaps = 72/283 (25%)
Query: 7 ARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRTLDKNGYMAVQVG---- 52
K+GMT V I+ ++ PVT++ V+ R ++ +
Sbjct: 43 GYKVGMTHVMAIDNKKNSPTEGMEVFTPVTIIETPPLTVMGIRAYERTSRGLKTLTDVLA 102
Query: 53 ----------------AGEAKVKNVSKPMRGFFSSVN-------------VSPKKKLFEF 83
+ K + + + + V K ++FE
Sbjct: 103 DDLKEDLERRINLPKNYDKDKALDKIEENKDYIEEVRVLVHTNPRLVTGVPKKKPEIFEC 162
Query: 84 RVQKDDD--------LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRAT 135
+ D L V F+ G+ VD +T GKGF G +KR A
Sbjct: 163 GLGGKDPQEKLEYALELLGKDVKISEIFSEGEYVDTIAVTKGKGFQGPVKRWGIKIQNAK 222
Query: 136 HGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL---------EVVSVDDK- 185
S R GS G P R AG+ G +R T N EV ++ K
Sbjct: 223 TARSGKGRHIGSLGP-WTPSRTMWRVPQAGQTGYHRRTEYNKMIMKIGTSDEVEKINPKG 281
Query: 186 ---------RGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
+LVKG VPG K I++R + + V +
Sbjct: 282 GFIRYGLVRNDYLLVKGSVPGPTKR-LIMLRKAIRPKVRQEKP 323
>gi|282164890|ref|YP_003357275.1| 50S ribosomal protein L3P [Methanocella paludicola SANAE]
gi|282157204|dbj|BAI62292.1| 50S ribosomal protein L3P [Methanocella paludicola SANAE]
Length = 341
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 54/282 (19%), Positives = 83/282 (29%), Gaps = 71/282 (25%)
Query: 5 VVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG 54
+V K GM+ V ++ R IPVT++ V R D Y +
Sbjct: 42 LVGFKAGMSHVVMVDDRPHSTTEGMEISIPVTIIETPAMNVAGIRAYDDGPYGKHVLAEA 101
Query: 55 EAKVK---------NVSKPMRGFFSSVNVSPKKKLFEF---------------------- 83
S + V K
Sbjct: 102 WVNDAKDLAKLFRLPKSVDTDAQLAKVAGLVKDGKVAELRLLTYVKTEEVSGIPKKVPEL 161
Query: 84 -----------RVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGL 132
+ + L V F G+LVDV+ +T GKG G +KR
Sbjct: 162 LENRVAGGSMDKRFEFAKSLLGKQVKPNDIFVPGELVDVSAITKGKGTQGPVKRWGIAIQ 221
Query: 133 RATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS-------VDDK 185
+ H + R G+ G +P RV G+ G ++ T N ++ V +
Sbjct: 222 KRKHARTGKKRHVGNLGP-WNPHRVRWQVPQLGQTGYHQRTEYNKRIIKLGEKAEEVTPE 280
Query: 186 ----------RGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
I+VKG +PG K + VR + + K
Sbjct: 281 GGFLHYGVLRNPYIVVKGSIPGPVKR-MVRVRPAVRPKNMPK 321
>gi|42858|emb|CAA23634.1| ribosomal protein L3 [Escherichia coli]
Length = 80
Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 28/80 (35%), Positives = 45/80 (56%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
G+V +K+GMT ++ +G IPVTV+ ++ +V + L +GY A+QV G K V
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEVEANRVTQVKDLANDGYRAIQVTTGAKKANRV 60
Query: 62 SKPMRGFFSSVNVSPKKKLF 81
+KP G F+ V + L+
Sbjct: 61 TKPEAGHFAKAGVEAGRGLW 80
>gi|157737003|ref|YP_001489686.1| 50S ribosomal protein L3 [Arcobacter butzleri RM4018]
gi|315636195|ref|ZP_07891449.1| 50S ribosomal protein L3 [Arcobacter butzleri JV22]
gi|157698857|gb|ABV67017.1| 50S ribosomal protein L3 [Arcobacter butzleri RM4018]
gi|315479556|gb|EFU70235.1| 50S ribosomal protein L3 [Arcobacter butzleri JV22]
Length = 191
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 17/206 (8%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
+ +K+GM+ + VT+L + + +V G V G+ +K
Sbjct: 3 FIVQKIGMSR--TVSVPSTAVTLLRVLDTKVCEV----TEGVALVSYSNGKK----FNKA 52
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+ G N+S + F + + S ++V T T G+GFSGA+
Sbjct: 53 IEGQQKKFNLSKEFNRFATITVANAE----AGDLDVSGLGEAKVVKSTFKTKGRGFSGAV 108
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR NF G RA+HG + R+ GS G + PGRV KKM G+ G V+VKN E++S D
Sbjct: 109 KRWNFAGGRASHGHRMGKRT-GSIGNCEWPGRVQPGKKMPGQYGNTNVSVKN-EIISFDA 166
Query: 185 KRGLILVKGCVPGAKKNSWILVRDSF 210
+ G++++KG V GA S ++ +
Sbjct: 167 ETGILVLKGSVSGA-NGSLGKIKVAK 191
>gi|406362|gb|AAD12434.1| unknown [Mycoplasma genitalium]
Length = 154
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 54/154 (35%), Positives = 81/154 (52%), Gaps = 5/154 (3%)
Query: 24 PVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEF 83
P+T+++ + QV +T+ K+ Y A + K ++KP +GFFS + + P K L E
Sbjct: 3 PITIVYCEANQVAGIKTIAKDNYNATLLSFQTVDEKQLNKPKQGFFSKLKLEPHKYLREI 62
Query: 84 RVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHR 143
R + +L + F +G+ VDVT +T G+GF+GA+KR NF HG HR
Sbjct: 63 RKMQGFELGKKITPQ--ELFKIGEYVDVTSLTKGRGFTGAIKRWNFKIGPLGHGAGYPHR 120
Query: 144 SHGSTGCRQDP---GRVFKNKKMAGRMGGNRVTV 174
GS + RVFK KKM+G G +VT+
Sbjct: 121 FQGSVQAGRGGSSAQRVFKGKKMSGHYGHEQVTI 154
>gi|303244465|ref|ZP_07330800.1| ribosomal protein L3 [Methanothermococcus okinawensis IH1]
gi|302485163|gb|EFL48092.1| ribosomal protein L3 [Methanothermococcus okinawensis IH1]
Length = 333
Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 52/243 (21%), Positives = 77/243 (31%), Gaps = 57/243 (23%)
Query: 24 PVTVLHLDNCQVVVHRTLDKNGYM---------------------------AVQVGAGEA 56
PVTVL + V R +K A E
Sbjct: 71 PVTVLEAPDITVAGIRVYEKTTKGLKTLTEVWAENLDKELNRKITTPKEPKANIEKLDEV 130
Query: 57 KVKNVSKPMRGFFS-SVNVSPKKKLFEFRVQKDDD----------LLPVGSVFSPSYFTV 105
K + PKKK ++ + + ++ FT
Sbjct: 131 ADKIAEVRAIVHTNPKNTNLPKKKPEIIEIRIGGNNISEKLAYAKEILGKTLSINDVFTD 190
Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165
G+ +D +T GKGF G +KR H R GS G P RV MAG
Sbjct: 191 GEFIDTIAITKGKGFQGPVKRWGIKIQFGKHRNKGVGRHTGSIGP-WTPKRVMWTVPMAG 249
Query: 166 RMGGNRVTVKNLEVVSV-----------------DDKRGLILVKGCVPGAKKNSWILVRD 208
+MG ++ T N ++ + D K +LVKG V G K +++R
Sbjct: 250 QMGYHQRTEYNKRILKIGNNGEEIVPKGGFLHYGDVKNNYVLVKGSVQGPAKR-MVVLRG 308
Query: 209 SFK 211
+ +
Sbjct: 309 AIR 311
>gi|257387876|ref|YP_003177649.1| 50S ribosomal protein L3P [Halomicrobium mukohataei DSM 12286]
gi|257170183|gb|ACV47942.1| ribosomal protein L3 [Halomicrobium mukohataei DSM 12286]
Length = 338
Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 48/280 (17%), Positives = 76/280 (27%), Gaps = 73/280 (26%)
Query: 4 GVVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53
G K GMT V + +PVTV+ + V R + Y +
Sbjct: 41 GFAGYKAGMTHVTLVNDEPNSPREGMEETVPVTVVETPPVRAVAVRAYEDTPYGKRPLTE 100
Query: 54 GEAKVKNVSKP-----MRGFFSSVNVS----------------------------PKKKL 80
+ G + PKKK
Sbjct: 101 VWTDEFHSELDRALDLPEGHDADAAEEQVRDALDAGDIADVRVVTHTVPDELANVPKKKP 160
Query: 81 FEFRVQKDDDLLPVGSVFSP------------SYFTVGQLVDVTGMTIGKGFSGAMKRHN 128
+ L + F G+ D+ +T GKG G +KR
Sbjct: 161 DVMETRVGGGSLSDRFEHALELVDDGGEHAMNDVFRAGEYADIAAVTKGKGTQGPVKRWG 220
Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------ 182
+ H R G+ G +P RV G+ G ++ T N ++ +
Sbjct: 221 VQKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGDGDDA 279
Query: 183 ----------DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+ LVKG VPG + + R + +
Sbjct: 280 SVDGGFVNYGEVDGPYTLVKGSVPGPDQR-LVRFRPAVRP 318
>gi|313681319|ref|YP_004059057.1| LSU ribosomal protein l3p [Sulfuricurvum kujiense DSM 16994]
gi|313154179|gb|ADR32857.1| LSU ribosomal protein L3P [Sulfuricurvum kujiense DSM 16994]
Length = 191
Score = 95.8 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 58/195 (29%), Positives = 91/195 (46%), Gaps = 16/195 (8%)
Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
+ K+GM+ ++ + VT+L + +V +G V G++ K V
Sbjct: 4 IVEKIGMSRTISVPSKV--VTLLKVKEIKVCEV----NDGVALVAYSQGKSTNKPVEGQQ 57
Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
+ + S + L + D + V + T G+GF+G MK
Sbjct: 58 KKYNLSAEFNKFATLEVANTEAGD--------LDMAPLANATTVKSSFNTKGRGFTGVMK 109
Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
R NF G HG HR+ GS G R+ PG+V K +KM+G+ G +VTVKN EV+S D +
Sbjct: 110 RWNFAGGPGAHG-HRFHRTGGSIGNREWPGKVQKGRKMSGQYGDEQVTVKN-EVMSYDAE 167
Query: 186 RGLILVKGCVPGAKK 200
G+++V G +PGA
Sbjct: 168 NGVLVVVGSIPGANG 182
>gi|78776487|ref|YP_392802.1| 50S ribosomal protein L3 [Sulfurimonas denitrificans DSM 1251]
gi|78497027|gb|ABB43567.1| LSU ribosomal protein L3P [Sulfurimonas denitrificans DSM 1251]
Length = 191
Score = 95.8 bits (237), Expect = 4e-18, Method: Composition-based stats.
Identities = 58/205 (28%), Positives = 91/205 (44%), Gaps = 17/205 (8%)
Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
+ K+GM+ + + PVT+L + + +V + V K ++K +
Sbjct: 4 IVEKIGMSRTITVPSK--PVTLLRVLDAKVCEV------NENSAIVAYKSGKK--MNKAI 53
Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
G ++S R + + +++ T T G+GF+GAMK
Sbjct: 54 EGQQKKYSIS----SEFNRFVTLEVANSEAGDIDLTPLAEAKVIKATFTTKGRGFTGAMK 109
Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
R NF G A HG R+ GS G + PGRV K KKM G+ G + +VKN E++S D +
Sbjct: 110 RWNFSGGPAEHGHRFGRRT-GSIGNAEWPGRVMKGKKMPGQYGNTQNSVKN-EIISFDAE 167
Query: 186 RGLILVKGCVPGAKKNSWILVRDSF 210
+I V G V GA S V+ +
Sbjct: 168 NKIIAVVGSVSGA-NGSLGRVKVAK 191
>gi|261403779|ref|YP_003248003.1| ribosomal protein L3 [Methanocaldococcus vulcanius M7]
gi|261370772|gb|ACX73521.1| ribosomal protein L3 [Methanocaldococcus vulcanius M7]
Length = 335
Score = 95.4 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 46/272 (16%), Positives = 82/272 (30%), Gaps = 69/272 (25%)
Query: 8 RKLGMTCVYNIE--------GRRI--PVTVLHLDNCQVVVHRTLDK-------------- 43
K GM+ + E G+ + P+T+L V R +
Sbjct: 45 YKAGMSHAFIKEDNQKSPKAGQEVFTPITILEAPPINVCAIRVYGRNERNYLTTLTEVWA 104
Query: 44 ----------------------NGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLF 81
+ A++ + +V + P +
Sbjct: 105 DNLDKELERKINLPKKEERKTVDDLEAIKDKIEDVRVLVHTNPKLTCLPKKKPEILEIRI 164
Query: 82 EFRVQKD----DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHG 137
+ ++ + + F G+L D G+T GKGF G +KR H
Sbjct: 165 GGKDIEERLNYAKEILGKQLNITDVFQEGELADTIGITKGKGFQGQVKRWGVKIQFGKHA 224
Query: 138 VSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV--------------- 182
R GS G Q P + M G+MG ++ T N ++ +
Sbjct: 225 RKGVGRHVGSIGPWQ-PKMIMWTVPMPGQMGYHQRTEYNKRILKIGNNGEEITPKGGFLH 283
Query: 183 --DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
K +++KG V G K + +R + +
Sbjct: 284 YGVIKNNYVVLKGSVQGPAKRLIV-LRRAIRP 314
>gi|292656685|ref|YP_003536582.1| 50S ribosomal protein L3 [Haloferax volcanii DS2]
gi|291372463|gb|ADE04690.1| ribosomal protein L3 [Haloferax volcanii DS2]
Length = 338
Score = 95.4 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 51/280 (18%), Positives = 79/280 (28%), Gaps = 73/280 (26%)
Query: 4 GVVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKNGYMAV---- 49
G K GMT V + +PVTV+ + V R ++ Y
Sbjct: 41 GFAGYKAGMTHVMMVNDEADSPHEGMEESVPVTVVETPPMRAVALRAYEQTPYGMKPQTE 100
Query: 50 -------------------------------QVGAGEAKVKNVSKPMRGFFSSVNVSPKK 78
V AGE V + K
Sbjct: 101 VWAGEFHDELDRVLDLPAEDTFDSDADALREAVEAGEVDDLRVITHTVPSELANVPKKKP 160
Query: 79 KLFEFRVQKDDDLLPVGSVFSP----------SYFTVGQLVDVTGMTIGKGFSGAMKRHN 128
+ E RV + F G+ +D G+T GKG G +KR
Sbjct: 161 DVMETRVGGGSMVERADFALDLVAEGGEHEMSDVFRAGEYLDAAGVTKGKGTQGPVKRWG 220
Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------ 182
+ H R G+ G +P RV G+ G ++ T N ++ +
Sbjct: 221 VQKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVPQLGQTGYHQRTELNKRLIDLGEGDDA 279
Query: 183 ----------DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+ L+KG +PG K + R + +
Sbjct: 280 SVEGGFVNYGEVDGSYALIKGSLPGPNKR-LLRFRPAIRP 318
>gi|289191591|ref|YP_003457532.1| ribosomal protein L3 [Methanocaldococcus sp. FS406-22]
gi|288938041|gb|ADC68796.1| ribosomal protein L3 [Methanocaldococcus sp. FS406-22]
Length = 335
Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 49/275 (17%), Positives = 84/275 (30%), Gaps = 69/275 (25%)
Query: 8 RKLGMTCVYNIE--------GRRI--PVTVLHLDNCQVVVHRTLDKNGYM---------- 47
K GM+ + E G+ I P+T+L V R +N
Sbjct: 45 YKAGMSHAFIKEDNPKSPNAGQEIFTPITILEAPPINVCAIRVYGRNERNYLTTLTEVWA 104
Query: 48 --------------------------AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLF 81
A++ + +V + P +
Sbjct: 105 DNLDKELERKIKLPKKEDRKTVEDLEALKDKIEDVRVLVHTNPKLTCLPKKKPEILEIRI 164
Query: 82 EFRVQKD----DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHG 137
+ ++ + + F G+LVD G+T GKGF G +KR H
Sbjct: 165 GGKDIEERLNYAKEILGKQLNITDVFQEGELVDTIGVTKGKGFQGQVKRWGVKIQFGKHA 224
Query: 138 VSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV--------------- 182
R GS G Q P V + M G+MG ++ T N ++ +
Sbjct: 225 RKGVGRHVGSIGPWQ-PKMVMWSVPMPGQMGYHQRTEYNKRILKIGNNGDEITPKGGFLH 283
Query: 183 --DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
+ +++KG V G K + +R + +
Sbjct: 284 YGVIRNNYVVLKGSVQGPAKRLIV-LRRAIRPQEP 317
>gi|242052021|ref|XP_002455156.1| hypothetical protein SORBIDRAFT_03g005220 [Sorghum bicolor]
gi|241927131|gb|EES00276.1| hypothetical protein SORBIDRAFT_03g005220 [Sorghum bicolor]
Length = 144
Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 27/69 (39%), Positives = 46/69 (66%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNV 61
R+GV+ K GM+ +++ G ++P+TVL +D+ V +T +K G+ A+Q+GAG+ K K++
Sbjct: 71 RTGVIGVKCGMSAMWDKWGAKVPITVLWVDDNVVTQVKTAEKEGFFALQLGAGQKKEKHL 130
Query: 62 SKPMRGFFS 70
KP G F
Sbjct: 131 PKPEVGHFR 139
>gi|15668348|ref|NP_247144.1| 50S ribosomal protein L3P [Methanocaldococcus jannaschii DSM 2661]
gi|1710558|sp|P54014|RL3_METJA RecName: Full=50S ribosomal protein L3P
gi|1590928|gb|AAB98161.1| LSU ribosomal protein L3P (rplC) [Methanocaldococcus jannaschii DSM
2661]
Length = 335
Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 48/275 (17%), Positives = 84/275 (30%), Gaps = 69/275 (25%)
Query: 8 RKLGMTCVYNIE--------GRRI--PVTVLHLDNCQVVVHRTLDKNGYM---------- 47
K GM+ + E G+ + P+T+L V R +N
Sbjct: 45 YKAGMSHAFIKEDNPKSPNAGQEVFTPITILEAPPINVCAIRVYGRNERNYLTTLTEVWA 104
Query: 48 --------------------------AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLF 81
A++ + +V + P +
Sbjct: 105 DNLDKELERKIKLPKKEDRKTVEDLEALKDKIEDVRVLVHTNPKLTCLPKKKPEILEIRI 164
Query: 82 EFRVQKD----DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHG 137
+ ++ + + F G+LVD G+T GKGF G +KR H
Sbjct: 165 GGKDIEERLNYAKEILGKQLNITDVFQEGELVDTIGVTKGKGFQGQVKRWGVKIQFGKHA 224
Query: 138 VSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV--------------- 182
R GS G Q P V + M G+MG ++ T N ++ +
Sbjct: 225 RKGVGRHVGSIGPWQ-PKMVMWSVPMPGQMGYHQRTEYNKRILKIGNNGDEITPKGGFLH 283
Query: 183 --DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
+ +++KG V G K + +R + +
Sbjct: 284 YGVIRNNYVVLKGSVQGPAKRLIV-LRRAIRPQEP 317
>gi|86152355|ref|ZP_01070565.1| ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 260.94]
gi|85840652|gb|EAQ57904.1| ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 260.94]
Length = 170
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 61/183 (33%), Positives = 85/183 (46%), Gaps = 16/183 (8%)
Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
+ K+GM+ I VT+L + N +V + G V G+A K V+
Sbjct: 4 IVEKIGMSRTIT--NPSIAVTLLRVVNAKVCEV----EGGKALVAYPKGKASNKCVAGQQ 57
Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
+ + S + L + D +++ V+ T G+G+SG MK
Sbjct: 58 KKYNLSAEYNRFATLEVANTEAGDLDETP--------LNEAKILKVSFNTKGRGYSGVMK 109
Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
RHNF G A+HG S HR HGS G R+ PGRV KMAG G +VTVKN EVVS D +
Sbjct: 110 RHNFAGGPASHG-SRFHRRHGSIGNREWPGRVQPGMKMAGHYGNTKVTVKN-EVVSYDAE 167
Query: 186 RGL 188
+
Sbjct: 168 NKI 170
>gi|169603664|ref|XP_001795253.1| hypothetical protein SNOG_04840 [Phaeosphaeria nodorum SN15]
gi|160706431|gb|EAT87231.2| hypothetical protein SNOG_04840 [Phaeosphaeria nodorum SN15]
Length = 190
Score = 93.9 bits (232), Expect = 2e-17, Method: Composition-based stats.
Identities = 41/90 (45%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Query: 1 MRSGVVARKLGMTCVYNIE-GRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
+R+G++A K GMT +Y+ G+R TVL LD VV H+T +KNGY AVQ+GAG+ + +
Sbjct: 80 LRTGLLALKRGMTAIYDPTTGKRAACTVLQLDRNVVVAHKTREKNGYWAVQIGAGQKEAR 139
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDD 89
NV+KPM G F+ +PK+ + EF+V+ +
Sbjct: 140 NVTKPMLGHFAKAETAPKRWVVEFKVKGQE 169
>gi|146302876|ref|YP_001190192.1| 50S ribosomal protein L3P [Metallosphaera sedula DSM 5348]
gi|172046889|sp|A4YCW6|RL3_METS5 RecName: Full=50S ribosomal protein L3P
gi|145701126|gb|ABP94268.1| LSU ribosomal protein L3P [Metallosphaera sedula DSM 5348]
Length = 341
Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 56/271 (20%), Positives = 85/271 (31%), Gaps = 61/271 (22%)
Query: 4 GVVARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRTLDKNGYMAVQV-- 51
G V K+GMT ++ I+ R +PVTVL V+ R N V
Sbjct: 44 GFVGYKVGMTHIFMIDEDRSSSMFGKEIYVPVTVLETPPIYVLALRAYGLNNRGEHSVMG 103
Query: 52 -------GAG--------------EAKVKNVSKPMRG---------------FFSSVNVS 75
G E K +
Sbjct: 104 EVWGDLGDFGKFITRRIRGLKIDKEKKEHQLKDIESNLESVSYFRLLVSTQPHLIPALGK 163
Query: 76 PKKKLFEFRVQKDDDLLPVGSVFSP--------SYFTVGQLVDVTGMTIGKGFSGAMKRH 127
+ E ++ + + F GQL+D+ G+T G GF G +KR+
Sbjct: 164 KTPDIVEVQIGGGNTKNQLEYGLKLLGNTLSVRDVFKEGQLMDIIGVTKGHGFQGVIKRY 223
Query: 128 NFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRG 187
L H R G+ G G+MG +R T N ++ + D
Sbjct: 224 GVQELPRWHKHRKGSRKVGTKGPSLGT---PSYVPQPGQMGFHRRTEYNKRILKISDDTK 280
Query: 188 LILVKGCVP--GAKKNSWILVRDSFKSAVNC 216
LI KG G KN+++LV+ S ++
Sbjct: 281 LINPKGGFVRYGLVKNTYLLVQGSTIGSIKR 311
>gi|1644227|dbj|BAA11007.1| ribosomal protein L3 [Bacillus subtilis]
Length = 60
Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
M G++ RK+GMT V+ G IPVTV+ V+ +T + +GY A+Q+G + + K
Sbjct: 1 MTKGILGRKIGMTQVFAENGDLIPVTVIEAAPNVVLQKKTAENDGYEAIQLGFDDKREK 59
>gi|110668741|ref|YP_658552.1| 50S ribosomal protein L3P [Haloquadratum walsbyi DSM 16790]
gi|121692171|sp|Q18GE9|RL3_HALWD RecName: Full=50S ribosomal protein L3P
gi|109626488|emb|CAJ52949.1| ribosomal protein L3 [Haloquadratum walsbyi DSM 16790]
Length = 338
Score = 93.1 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 45/281 (16%), Positives = 80/281 (28%), Gaps = 73/281 (25%)
Query: 4 GVVARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRTLDKNGYMAVQVG- 52
G K GMT V + +PVTV+ + V R + Y + +
Sbjct: 41 GFAGYKAGMTQVLMVNDEANSPREGMEEAVPVTVVETPPMRAVALRAYEDTPYGSKPLTE 100
Query: 53 -----AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKD------------------- 88
+ + + P F + + +
Sbjct: 101 VWGREFDTSLERTLDLPNEDTFEDDAAALRDDAETGDIDDVRLITHTLPAGMRNIPKKTP 160
Query: 89 --------------------DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128
D + G F G+ +D G+T GKG G +KR
Sbjct: 161 DVMETRVGGGTLTDRVEFGLDLISDGGEHEISDIFRAGEYLDAAGVTKGKGTQGPVKRFG 220
Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------ 182
+ H R G+ G +P RV G+ G ++ T N ++ +
Sbjct: 221 VQKRKGKHARQGYRRRIGNLGP-WNPSRVRSTVPQQGQTGYHQRTELNKRLIEIGNGDEP 279
Query: 183 ----------DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+ L+KG +PG + + R + + +
Sbjct: 280 TVDGGFVGYGEVDGPYALIKGSLPGPDQR-LLRFRTAVRPS 319
>gi|296109263|ref|YP_003616212.1| ribosomal protein L3 [Methanocaldococcus infernus ME]
gi|295434077|gb|ADG13248.1| ribosomal protein L3 [Methanocaldococcus infernus ME]
Length = 333
Score = 92.0 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 47/272 (17%), Positives = 82/272 (30%), Gaps = 69/272 (25%)
Query: 8 RKLGMTC-VYNIEGRR---------IPVTVLHLDNCQVVVHRTLDKN--GY--------- 46
K GMT + + ++ P+TVL V R +N Y
Sbjct: 43 YKAGMTHGLIKEDNQKSPRAGQEVFTPMTVLEAPPINVFGIRVYGRNERNYLTTLTEIWA 102
Query: 47 -------------------------MAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLF 81
++ + +V + P +
Sbjct: 103 DNLDKELSRKIKLPKKEERKGVEYLDEIKDKIEDVRVLVHTNPKLTCLPKKKPEILEIRI 162
Query: 82 EFRVQKD----DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHG 137
+ ++ + + F G+LVD G+T GKGF G +KR H
Sbjct: 163 GGKDLEERLNYAKEILGKQLNITDVFQEGELVDTIGVTKGKGFQGVVKRWGVKIQPRKHR 222
Query: 138 VSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV--------------- 182
R GS G Q P + G+MG ++ T N ++ +
Sbjct: 223 RQGVGRHVGSIGPWQ-PKMIMWTVPRPGQMGYHQRTEYNKRILKIGNNGEEITPEGGFPH 281
Query: 183 --DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
K +++KG V G +K + +R + +
Sbjct: 282 YGVIKNNYVILKGSVQGPQKRLIV-LRSAIRP 312
>gi|13541155|ref|NP_110843.1| 50S ribosomal protein L3P [Thermoplasma volcanium GSS1]
gi|42559678|sp|Q97BX7|RL3_THEVO RecName: Full=50S ribosomal protein L3P
gi|14324543|dbj|BAB59470.1| ribosomal protein large subunit L3 [Thermoplasma volcanium GSS1]
Length = 331
Score = 91.6 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 61/283 (21%), Positives = 99/283 (34%), Gaps = 71/283 (25%)
Query: 4 GVVARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53
G K+GMT V ++ R+ +PVTV+ + V+ R D++ + V
Sbjct: 41 GFAGFKVGMTHVEMVDYRKTSVTAGQPIFVPVTVIEVPPLDVIGIRLYDEDEEGNMVVVY 100
Query: 54 GEAKVKNVSKPMRGF---FSSVNVSP-------------------------KKKLFEFRV 85
E +N+ K + F V P K ++FE R+
Sbjct: 101 -EKWTQNLDKELFKKITTFKEVKEKPVPETYADVRLIVATRNKDVPGIPSKKPEIFELRI 159
Query: 86 QKDDDLLPVGSVFSP---------SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATH 136
+ + + + G+ VDV +T GKGF+G ++R L +
Sbjct: 160 GGGNSVKERFEYATAHLGKTIRFEDFSKPGKFVDVLSVTKGKGFTGHVQRFGVKLLPRKN 219
Query: 137 GVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS---------VD---- 183
HR T P V AG+MG + T+ N+ V+ ++
Sbjct: 220 RK---HRRMIGTLGPWHPDWVRNTVPQAGQMGYQQRTISNVRVLKYSKGEDADTINVRGG 276
Query: 184 ------DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
K +L+ G VPG K I +RD + V V
Sbjct: 277 FLHYGLVKNDYVLLFGSVPGPAKR-LIKMRDPARQKVPDIDNV 318
>gi|330835825|ref|YP_004410553.1| 50S ribosomal protein L3P [Metallosphaera cuprina Ar-4]
gi|329567964|gb|AEB96069.1| 50S ribosomal protein L3P [Metallosphaera cuprina Ar-4]
Length = 341
Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 59/273 (21%), Positives = 94/273 (34%), Gaps = 61/273 (22%)
Query: 2 RSGVVARKLGMTCVYNIE--------GRRI--PVTVLHLDNCQVVVHRTL---------- 41
G + K GMT VY I+ G+ I PVTV+ V+ R
Sbjct: 42 MLGFIGYKAGMTHVYMIDEDKSSSMYGKEIYMPVTVIETPPILVMSLRAYAIDGKGESMS 101
Query: 42 ---------DKNGYMAVQVGAGEA---------KVKNVSKPMRGFFSS-VNVSPKKKLFE 82
DK+ Y+ ++ + + K + FF V+ P
Sbjct: 102 IGEVWGDLSDKSKYITRRIKSLKIQKEKTEQQLKKIESNLDNISFFRLLVSTQPYLIPSL 161
Query: 83 FRVQKDDDLLPV-----------------GSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
+ D + + +V F GQL+D+ G+T G GF G +K
Sbjct: 162 GKKTPDIAEIQIGGGNPKAQLELGLKLLGNTVSVRDVFNEGQLIDILGVTTGYGFQGVIK 221
Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK 185
R+ L H R G+ G G+MG +R T N ++ + D+
Sbjct: 222 RYGVQELPRWHKHRKGSRKVGTKGPSLGT---PSYVPQPGQMGYHRRTEYNKRILRISDE 278
Query: 186 RGLILVKGCVP--GAKKNSWILVRDSFKSAVNC 216
I KG G +N+++LV+ S +
Sbjct: 279 INQINPKGGFVRYGLVRNTYLLVQGSTIGPIKR 311
>gi|260891594|ref|ZP_05902857.1| hypothetical protein GCWU000323_02809 [Leptotrichia hofstadii
F0254]
gi|260858702|gb|EEX73202.1| ribosomal protein L3 [Leptotrichia hofstadii F0254]
Length = 90
Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 47/90 (52%), Positives = 61/90 (67%), Gaps = 2/90 (2%)
Query: 124 MKRHNFGGLRATHGVSISHRSHGS-TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
MKRHNFGG RA+HGVS +HR GS G V K KKMAGR+G +VTV+NL+V+
Sbjct: 1 MKRHNFGGNRASHGVSRNHRLGGSNAGGAASNSNVPKGKKMAGRLGAEKVTVQNLQVIKY 60
Query: 183 DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
D + L+LVKG VPG KN +++++ S K
Sbjct: 61 DVENSLLLVKGAVPGP-KNGYLVIKKSVKK 89
>gi|77024938|gb|ABA61365.1| ribosomal protein L3 [uncultured marine group II euryarchaeote
HF70_59C08]
Length = 338
Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 52/281 (18%), Positives = 85/281 (30%), Gaps = 76/281 (27%)
Query: 4 GVVARKLGMTCVYNIE--------GRRI--PVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53
G K GMT V + G + VTV+ + +V+ R Y G
Sbjct: 42 GFAGWKAGMTHVMMRDLNPGSPSAGAEVRKAVTVVEVPPMRVLAVRGYKMTPYGKQTAGE 101
Query: 54 GEAKVKNVS---------------KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVF 98
A +S + S ++ + D + VGS
Sbjct: 102 AWASADKLSDVIPSLPRRIPERKEHDANAHLDKLRESDLAEVRLIVSSQPDKVSAVGSKS 161
Query: 99 -----------------------------SPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF 129
F G +DV G+T G G G ++R
Sbjct: 162 PEIMEMGLTGGDLGAQLDWAAEKLGEELGIEDVFESGSDIDVIGVTKGYGNQGVVRRFGV 221
Query: 130 GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------- 182
L +H S R G+ G V K + AG+ G ++ T N ++ +
Sbjct: 222 KLL--SHKNSKRRRQIGNMGDFGTGY-VRKTIRQAGQTGYHQRTEYNKRILRIAGEEESQ 278
Query: 183 -----------DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+ K ++++G +PG K I RD+ +
Sbjct: 279 ITPAGGFLHYGEVKNHYMIIQGSLPGPAKR-LIRFRDAARP 318
>gi|284165492|ref|YP_003403771.1| ribosomal protein L3 [Haloterrigena turkmenica DSM 5511]
gi|284015147|gb|ADB61098.1| ribosomal protein L3 [Haloterrigena turkmenica DSM 5511]
Length = 339
Score = 90.4 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 51/281 (18%), Positives = 87/281 (30%), Gaps = 74/281 (26%)
Query: 4 GVVARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRTLDKNGYMAVQVG- 52
G K GMT V ++ + +PVT++ + V R ++ Y V
Sbjct: 41 GFAGYKAGMTHVVMVDDKANSPTEGMEQTVPVTIVETPPMRAVALRAYEETPYGMKPVTE 100
Query: 53 -----AGEAKVKNVSKPMRGFFSSVNVS----------------------------PKKK 79
+ + P + + PKKK
Sbjct: 101 VWTDEFVPELDRVLDIPGDDYDTDAAEDELRGLLEQGRVDDVRVITHTVPSEIPSVPKKK 160
Query: 80 L------------FEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRH 127
+ + + G F G+ VD +G+T GKG G +KR
Sbjct: 161 PDVMETRVGGGSVEDRIDFALETVADGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRW 220
Query: 128 NFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV----D 183
+ H R G+ G +P RV G+ G ++ T N +V + D
Sbjct: 221 GVQKRKGKHARQGWRRRIGNLGP-WNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGAD 279
Query: 184 D--KRGLI----------LVKGCVPGAKKNSWILVRDSFKS 212
G + L+KG +PG ++ + R + +
Sbjct: 280 ATVDGGFVNYGEVDGPHALIKGSLPGPQQR-LVRFRPAIRP 319
>gi|224437283|ref|ZP_03658255.1| 50S ribosomal protein L3 [Helicobacter cinaedi CCUG 18818]
gi|313143738|ref|ZP_07805931.1| 50S ribosomal protein L3 [Helicobacter cinaedi CCUG 18818]
gi|313128769|gb|EFR46386.1| 50S ribosomal protein L3 [Helicobacter cinaedi CCUG 18818]
Length = 192
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 61/196 (31%), Positives = 86/196 (43%), Gaps = 15/196 (7%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
+ K+GM+ + VT+L + +V +NG V G A K V+
Sbjct: 3 FIVEKIGMSRTIGT--KSEAVTLLRVLGAKVCEVY---ENGKGLVAYSQGRAINKAVAGQ 57
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+ + S + L + + + V V T G+GFSGAM
Sbjct: 58 QKKYSLSKEFNRFATLKLGNKEVGE--------LDTGVLGEAKCVQVRFKTKGRGFSGAM 109
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR NF G A HG S HR GS G R+ PGRV KKMAG G V+ KN +V+S D
Sbjct: 110 KRWNFQGGPAAHG-SRFHRRLGSIGNREWPGRVQPGKKMAGHYGNELVSGKN-DVMSFDK 167
Query: 185 KRGLILVKGCVPGAKK 200
+ ++++KG V G
Sbjct: 168 ESAILVLKGSVAGFNG 183
>gi|298674802|ref|YP_003726552.1| 50S ribosomal protein L3 [Methanohalobium evestigatum Z-7303]
gi|298287790|gb|ADI73756.1| ribosomal protein L3 [Methanohalobium evestigatum Z-7303]
Length = 337
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 54/282 (19%), Positives = 83/282 (29%), Gaps = 72/282 (25%)
Query: 5 VVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA- 53
K+GMT V I+ +P TV+ + V R + Y V
Sbjct: 42 FAGYKVGMTHVIMIDDTKNSVTEGAEISVPATVVETPDIGVASIRAYKDSEYGKKPVAEA 101
Query: 54 ----------------------------------GEAKVKNVSKPMRGFFSSVNVSPKKK 79
G K V + K
Sbjct: 102 WATDLDADVLRKVKSPDNHDTEKSLEKMESLIDDGTVKDLRVVTYTLPSNLTGVPKKKSD 161
Query: 80 LFEFRVQKDDDLLP--------VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
+ E V D + F G +VD+ +T GKG G +KR
Sbjct: 162 IMETGVSGSDMKEKFEYAKSILGTKISITDVFNPGGIVDIAAITTGKGTQGPVKRWGIQI 221
Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK------ 185
+ H + S R G+ G P + G+MG ++ T N ++ V ++
Sbjct: 222 AKHKHNRAGSARQVGTLGP-WHPAHISWRVPQMGQMGYHQRTEYNKRIIKVSNEGSEINP 280
Query: 186 -----------RGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
+L+KG VPG K + RD +S V+
Sbjct: 281 DGGFLNYGLVRGNYVLIKGSVPGPSKR-LVRFRDPIRSKVSS 321
>gi|327311641|ref|YP_004338538.1| 50S ribosomal protein L3P [Thermoproteus uzoniensis 768-20]
gi|326948120|gb|AEA13226.1| 50S ribosomal protein L3P [Thermoproteus uzoniensis 768-20]
Length = 337
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 49/285 (17%), Positives = 83/285 (29%), Gaps = 76/285 (26%)
Query: 4 GVVARKLGM-----------TCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
G A K+GM + ++ E TVL +V+ R + +
Sbjct: 43 GFAAYKVGMLHAVVVEDRQTSPLFGKE-VVKAATVLEAPPLRVIAARLYTLDPTNGYRKA 101
Query: 53 AGEAKVKNVSKPMRGFFS---------------------------------------SVN 73
GE V K +
Sbjct: 102 VGEVWAPEVPKDVYRAVKTLPEKFDLEAELKRIEAVKGMAVDVRAIVATQPRLAGIGKKT 161
Query: 74 VSPKKKLFEFRVQKDDDLLPVGSVFS-----PSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128
+ +D L + F+ GQLVDV +T GKG+ G +KR
Sbjct: 162 PEILEIPIGGVPSVEDRLKFALDMLGKEVRISDVFSAGQLVDVLAITRGKGWQGVIKRFG 221
Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------ 182
L H HR G+ G + + + G+MG ++ T N ++ +
Sbjct: 222 VKILPRWHKHRKGHRRTGTIGPQSPA--LMFTQPRPGQMGFHQRTEYNKRILKIGNNPAE 279
Query: 183 -----------DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
K +++ G VPG +K +++R +
Sbjct: 280 INPKGGWPHYGLVKSDFLVLSGSVPGVQKR-LVVLRHPVRPPPKA 323
>gi|161546624|ref|NP_860909.2| 50S ribosomal protein L3 [Helicobacter hepaticus ATCC 51449]
gi|42559601|sp|Q7VGE4|RL3_HELHP RecName: Full=50S ribosomal protein L3
Length = 192
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 59/196 (30%), Positives = 89/196 (45%), Gaps = 15/196 (7%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
+ K+GM+ + VT+L + +V NG V G+ +V+K
Sbjct: 3 FIVEKIGMSRTIGT--KSEAVTLLRVLGAKVCEIYD---NGKALVAYSQGK----SVNKA 53
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+ G ++S + F + + + + V V+ T G+GFSGAM
Sbjct: 54 IAGQQKKYSLSKEFNRFATLKVSN----KEVGELDVASLSEAKRVQVSFKTKGRGFSGAM 109
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD 184
KR NF G HG S HR GS G R+ PGRV KKMAG G V+ KN +++S D
Sbjct: 110 KRWNFQGGPGAHG-SRFHRRLGSIGNREWPGRVQPGKKMAGHYGNELVSAKN-DIMSFDK 167
Query: 185 KRGLILVKGCVPGAKK 200
+ ++++KG V G
Sbjct: 168 QSAILVLKGSVAGFNG 183
>gi|159905511|ref|YP_001549173.1| 50S ribosomal protein L3P [Methanococcus maripaludis C6]
gi|226730533|sp|A9A9B8|RL3_METM6 RecName: Full=50S ribosomal protein L3P
gi|159887004|gb|ABX01941.1| ribosomal protein L3 [Methanococcus maripaludis C6]
Length = 334
Score = 89.3 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 47/253 (18%), Positives = 89/253 (35%), Gaps = 60/253 (23%)
Query: 19 EGRRI--PVTVLHLDNCQVVVHRTLDK----------------NGYMAVQVGAGEAKVKN 60
G+ + PVTVL + V R +K +G + ++ + + K
Sbjct: 64 NGQEVFTPVTVLETPDVTVAGIRLYEKTTKGLQALTEVWAEQLDGDLGRKLTLVKKEEKK 123
Query: 61 VSKPMRGFFSSV-------NVSPKKKLFEFRVQKDDD----------------LLPVGSV 97
+ + + +PK + + + + ++
Sbjct: 124 TADALDAVLEKATEVRAIVHTNPKTTGIPKKKPEVVEIRIGGSSVAERLAYAKEILGKTL 183
Query: 98 FSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRV 157
F G+++D +T GKGF G++KR H R GS G + P RV
Sbjct: 184 AISDVFEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGKHQRKGVGRHTGSIGPWR-PRRV 242
Query: 158 FKNKKMAGRMGGNRVTVKNLEVVSVDDK-----------------RGLILVKGCVPGAKK 200
+ G+MG ++ T N ++ + + G ++VKG V G K
Sbjct: 243 MWTVPLPGQMGFHQRTEYNKRILKLGSEGAEITPKGGFLNYGAVKNGYVVVKGTVQGPAK 302
Query: 201 NSWILVRDSFKSA 213
+++R S ++A
Sbjct: 303 R-LVVLRGSVRAA 314
>gi|297619637|ref|YP_003707742.1| ribosomal protein L3 [Methanococcus voltae A3]
gi|297378614|gb|ADI36769.1| ribosomal protein L3 [Methanococcus voltae A3]
Length = 333
Score = 89.3 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 50/272 (18%), Positives = 82/272 (30%), Gaps = 67/272 (24%)
Query: 8 RKLGMTC-VYNIEG---------RRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAK 57
K G+T +Y PVTVL N + R K+ + A
Sbjct: 45 YKAGVTHALYVENNPKSPNAEQEVASPVTVLETPNITIAGIRVYKKDTNGLKVLTEVWAP 104
Query: 58 VKNVSKPMRGFFSS--------------------------------VNVSPKKKLFEFRV 85
+ + + P+
Sbjct: 105 ELDQELARKLTVAKKELKSVDTLDSLINEIVDVRVIVYTIPKETAIAKKKPEVVEIRVGG 164
Query: 86 QKDDDLLPVGSVF------SPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVS 139
D+ L F G+++D +T GKGF G++KR H
Sbjct: 165 SSVDERLNYAKGILGQKLSINDVFEAGEIIDTVAVTKGKGFQGSVKRWGIKIQFGKHQRK 224
Query: 140 ISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK-------------- 185
R GS G + P RV + + G+MG ++ T N + + +
Sbjct: 225 GVGRHTGSIGPWR-PRRVMWSVPLPGQMGFHQRTEYNKRIFKIGAEGTEVTPKGGFLNYG 283
Query: 186 ---RGLILVKGCVPGAKKNSWILVRDSFKSAV 214
G +LVKG V G K +++R + ++ V
Sbjct: 284 VLKNGYVLVKGTVQGPAKR-LVMIRGAIRAPV 314
>gi|315229856|ref|YP_004070292.1| 50S ribosomal protein L3e (L3p) [Thermococcus barophilus MP]
gi|315182884|gb|ADT83069.1| LSU ribosomal protein L3e (L3p) [Thermococcus barophilus MP]
Length = 346
Score = 89.3 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 52/293 (17%), Positives = 87/293 (29%), Gaps = 85/293 (29%)
Query: 4 GVVARKLGMTCVYNIE-------GRRI--PVTVLHLDNCQVVVHRTLDKNGYMAVQVG-- 52
G K GMT + I+ G+ I PVT++ V R K GY+ ++
Sbjct: 40 GFAGYKAGMTHILMIDDRPGLTKGKEIFMPVTIVETPPMVVFGIRAY-KQGYLGLETATE 98
Query: 53 --------------------------------------AGEAKVKNVSKPMRGFFSSVNV 74
+GE + +
Sbjct: 99 VWIPNLNPDLKRRIKTLPKNYDEGAFQQKLGELEDLVKSGEIVEVRALVHTQPRLIKLKK 158
Query: 75 SPKKKLFEFRVQKDDDLLPVGSVF------SPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128
P+ + + +D + G+L+DV +T GKG G +KR
Sbjct: 159 KPEVMEYAVGGKSVEDKFAYLKEKLGKEIRAKEVLKEGELLDVIAVTKGKGTQGPVKRWG 218
Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRG- 187
+ R G+ G P RV AG+MG + T N ++++ + G
Sbjct: 219 IKIQFHKAQRAGKGRHVGNLGP-WHPARVMWTVPQAGQMGFHHRTEFNKRLIAI-GENGF 276
Query: 188 -------------------------LILVKGCVPGAKKNSWILVRDSFKSAVN 215
+++ G VPGA K + VR + +
Sbjct: 277 LELNGNKIEITPKGGFPHYGIVRSDFLMIAGSVPGAIKR-IVRVRPAIRPPAK 328
>gi|126460189|ref|YP_001056467.1| 50S ribosomal protein L3P [Pyrobaculum calidifontis JCM 11548]
gi|212288409|sp|A3MWI4|RL3_PYRCJ RecName: Full=50S ribosomal protein L3P
gi|126249910|gb|ABO09001.1| LSU ribosomal protein L3P [Pyrobaculum calidifontis JCM 11548]
Length = 338
Score = 88.5 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 62/291 (21%), Positives = 93/291 (31%), Gaps = 77/291 (26%)
Query: 4 GVVARKLGMTC--VYNIE------GRRI--PVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53
G A K GM V + G+ + VTVL V R + +V
Sbjct: 43 GFAAYKAGMLHAVVVDDRPTSPLYGKEVVKAVTVLDAPPLYVAAVRLYTLDPTNGYKVAV 102
Query: 54 GEAKVKNVSKP-------MRGFFSSVNVSPKKKLFEFRVQ-------------------- 86
GEA V F + + ++ + V
Sbjct: 103 GEAWVSEPPADLRRVLTLPEKFDTEKQLKALEEYRDVAVDVRVLVATQPRLSGIGKKTPE 162
Query: 87 ----------------KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130
L +V FT GQLVDV +T GKG+ G +KR
Sbjct: 163 VLEIPVGGVPSIDERINFAISLLGKTVSPKDVFTPGQLVDVIAVTKGKGYQGVVKRFGVT 222
Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRG--- 187
L H HR G+ G + + + G+MG ++ T N ++ + G
Sbjct: 223 ILPRWHKHRKGHRRTGTIGPQAPA--LMFTQPRPGQMGFHQRTEYNKRILKI-GDNGAEI 279
Query: 188 ---------------LILVKGCVPGAKKNSWIL---VRDSFKSAVNCKGKV 220
IL++G VPGA+K +L VR K+ + +V
Sbjct: 280 TPKSGFPHYGVIKGPYILLQGSVPGARKRLVVLRYPVRPPKKAPPAAEPQV 330
>gi|14600545|ref|NP_147062.1| 50S ribosomal protein L3P [Aeropyrum pernix K1]
gi|6685859|sp|Q9YFM2|RL3_AERPE RecName: Full=50S ribosomal protein L3P
gi|5103618|dbj|BAA79139.1| 50S ribosomal protein L3P [Aeropyrum pernix K1]
Length = 344
Score = 88.5 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 52/283 (18%), Positives = 83/283 (29%), Gaps = 81/283 (28%)
Query: 5 VVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA- 53
+ + GMT V+ ++ R +PVT++ V R GY +
Sbjct: 45 FLGYRAGMTHVFMVDDRPGRPTSGKEIFVPVTIVETPPMFVAAVRLY---GYDPNRGRYS 101
Query: 54 ---------------------GEAKVKNVSKPMRGFFSSVNV----------------SP 76
G + K +
Sbjct: 102 LGEAWAQPPPELELQRRISTLGSFDTDKMLKSLEERLDKAEDVRLIAASQPKLAGGLSKK 161
Query: 77 KKKLFEFRVQKDDDLLPVGSVFSP---------SYFTVGQLVDVTGMTIGKGFSGAMKRH 127
K L E +V D+ + F GQLVDV +T GKGF G +KR
Sbjct: 162 KPDLLEIKVGGVSDVTKLFDYAKDVLGNLIAVNDVFEEGQLVDVIAVTKGKGFQGVIKRW 221
Query: 128 NFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK-- 185
L H R G+ + F AG+ G +R T N ++ +DD
Sbjct: 222 GVKELPRWHKHRKGSRRIGARSHGRST---FWETPQAGQTGFHRRTEYNKRILMIDDDGY 278
Query: 186 ---------------RGLILVKGCVPGAKKNSWILVRDSFKSA 213
+++ G +PG K ++ R + +
Sbjct: 279 KVTPAGGFLRYGVVRSTFVMLSGSIPGTPKRPIVM-RWAIRPP 320
>gi|218672012|ref|ZP_03521681.1| 50S ribosomal protein L3 [Rhizobium etli GR56]
Length = 74
Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 54/75 (72%), Positives = 62/75 (82%), Gaps = 1/75 (1%)
Query: 141 SHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKK 200
SHRSHGSTG RQDPG+VFKNKKMAG MG RVT +NLEVVS D+ RGLIL+KG VPG+ K
Sbjct: 1 SHRSHGSTGSRQDPGKVFKNKKMAGHMGQTRVTTQNLEVVSTDEDRGLILIKGAVPGS-K 59
Query: 201 NSWILVRDSFKSAVN 215
+WI+VRD+ KSA
Sbjct: 60 GAWIIVRDAVKSAAK 74
>gi|218678066|ref|ZP_03525963.1| 50S ribosomal protein L3 [Rhizobium etli CIAT 894]
Length = 137
Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 70/141 (49%), Positives = 84/141 (59%), Gaps = 13/141 (9%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
MT VYN G +PVTVL ++ QVV RT++KNGY AVQ+GAG+AKVKN SK MRG F+
Sbjct: 1 MTRVYNDAGEHVPVTVLRMEAVQVVATRTVEKNGYTAVQLGAGQAKVKNTSKAMRGNFAV 60
Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
NV PK KL EFRV + D+LL +G+ +F GQLVDVTG TIGKGF+
Sbjct: 61 ANVEPKAKLQEFRVSE-DNLLEIGTELKAGHFAAGQLVDVTGTTIGKGFA---------- 109
Query: 132 LRATHGVSISHRSHGSTGCRQ 152
H RS C
Sbjct: 110 --RRHEAPRFRRSPRHARCVG 128
>gi|253795616|ref|YP_003038712.1| putative 50S ribosomal subunit protein L3 [Candidatus Hodgkinia
cicadicola Dsem]
gi|253739924|gb|ACT34259.1| putative 50S ribosomal subunit protein L3 [Candidatus Hodgkinia
cicadicola Dsem]
Length = 181
Score = 87.7 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 64/180 (35%), Positives = 91/180 (50%), Gaps = 23/180 (12%)
Query: 23 IPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGF--FSSVNVSPKKKL 80
+ VT+L + C VV + V VG ++ + F + P +
Sbjct: 7 VAVTLLDVLACVVVYVSS------DGVVVGYNLNARLGLTSCVSVRRAFKAHVKLPNEF- 59
Query: 81 FEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSI 140
GSV S + DV GKGF+G +KRH F GLRA+HGVS+
Sbjct: 60 --------------GSVLSADWLARAHATDVNARCKGKGFAGVIKRHGFSGLRASHGVSL 105
Query: 141 SHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKK 200
+HR+ G+ G RQDPGRV+K KMAGR+GG VT+K ++VV++D + +KG VPG +
Sbjct: 106 AHRACGAIGSRQDPGRVWKGTKMAGRLGGGFVTLKRVKVVALDSFCQRVTLKGPVPGGSR 165
>gi|167945157|ref|ZP_02532231.1| Ribosomal protein L3 [Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 61
Score = 87.7 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 34/54 (62%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG 54
M GV+ RK+GMT V+ EG +PVTV+ + +V ++ D +GY A+QV G
Sbjct: 1 MAIGVIGRKIGMTRVFTEEGASVPVTVIEVAPNRVSQLKSEDTDGYRAIQVTTG 54
>gi|294496017|ref|YP_003542510.1| 50S ribosomal protein L3P [Methanohalophilus mahii DSM 5219]
gi|292667016|gb|ADE36865.1| LSU ribosomal protein L3P [Methanohalophilus mahii DSM 5219]
Length = 337
Score = 87.7 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 59/286 (20%), Positives = 85/286 (29%), Gaps = 72/286 (25%)
Query: 4 GVVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKNGY------- 46
G K+GMT V I+ +PVTV+ + R Y
Sbjct: 41 GFAGYKVGMTHVIMIDDAKNSLTEGAEIAVPVTVIETPQIGIAAIRAYKDTPYGEKTISE 100
Query: 47 ----------------------------MAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKK 78
MA V G+ V S K
Sbjct: 101 AWSANLDGDIGRRIKTPKNYNTEKSLENMASLVEEGKVSEIRVITYTIPSSVSGIPKKKA 160
Query: 79 KLFEFRVQKDD--------DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130
+ E V D + V F+ G ++DV +T G G G +KR
Sbjct: 161 DIMETAVSGSDVKAKFEYAKYILGSKVAISDIFSEGNIIDVAAITRGYGTEGPVKRWGIQ 220
Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV--DDKR-- 186
+ H S R G+ G +P V G+ G ++ T N ++ V D
Sbjct: 221 LAKNKHSRQSSLRQVGTLGP-WNPPHVSWRVPQMGQAGYHQRTEYNKRILKVSSDVDEVN 279
Query: 187 -------------GLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
ILVKG VPG K I +R+ + + G+
Sbjct: 280 PAGGFVNYGLVGGDYILVKGTVPGPSKR-LIRLREPTRPKTSAVGE 324
>gi|149928577|ref|ZP_01916799.1| ribosomal protein L3 [Limnobacter sp. MED105]
gi|149822702|gb|EDM81967.1| ribosomal protein L3 [Limnobacter sp. MED105]
Length = 60
Score = 87.7 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 36/58 (62%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKV 58
M G++ RK+GM ++ G IPVTV+ + + +V +TL+++GY AVQ+ G +
Sbjct: 1 MSLGLIGRKIGMMRIFTDAGVSIPVTVVDVSSNRVAQLKTLEQDGYTAVQLAYGSKRA 58
>gi|212223211|ref|YP_002306447.1| 50S ribosomal protein L3P [Thermococcus onnurineus NA1]
gi|226730581|sp|B6YSL3|RL3_THEON RecName: Full=50S ribosomal protein L3P
gi|212008168|gb|ACJ15550.1| LSU ribosomal protein L3P [Thermococcus onnurineus NA1]
Length = 347
Score = 87.7 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 53/294 (18%), Positives = 89/294 (30%), Gaps = 82/294 (27%)
Query: 2 RSGVVARKLGMTCVYNIE-------GRRI--PVTVLHLDNCQVVVH-------------- 38
G K GMT + I+ G+ I PVTV+ + V
Sbjct: 38 MLGFAGYKAGMTHILMIDDRPGLTKGKEIFMPVTVVEVPPLFVYGIRAYRQGYLGLETAT 97
Query: 39 ---------------RTLDKN----------GYMAVQVGAGEAKVKNVSKPMRGFFSSVN 73
+TL K+ G + V GE + + + +
Sbjct: 98 EVWFHELNDYVKRRIKTLPKDYNEEAFQAKLGQLEDLVNDGEIVDVRLLVHTQPWLIKLK 157
Query: 74 VSPKKKLFEFRVQKDDDLLPVGSVF------SPSYFTVGQLVDVTGMTIGKGFSGAMKRH 127
P+ + + G+L+DV +T GKG G +KR
Sbjct: 158 KKPEVMEYAIGGDDVKAKFDYAKEKIGKELRASEVLHEGELLDVIAVTKGKGTQGPVKRW 217
Query: 128 NFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV----- 182
+ R G+ G P RV AG+MG + T N ++++
Sbjct: 218 GIKIQFHKAQRAGKGRHVGNLGP-WHPTRVMWTVPQAGQMGFHHRTEFNKRLIAIGENGK 276
Query: 183 ---DDKR------------------GLILVKGCVPGAKKNSWILVRDSFKSAVN 215
D+K ++++G +PG+ K I VR + +
Sbjct: 277 LKLDEKNEIEITPKGGFPHYGIIRSDFLMIQGTIPGSFKR-IIRVRPAIRPPKK 329
>gi|45359106|ref|NP_988663.1| 50S ribosomal protein L3P [Methanococcus maripaludis S2]
gi|74553576|sp|Q6LX10|RL3_METMP RecName: Full=50S ribosomal protein L3P
gi|45047981|emb|CAF31099.1| LSU Ribosomal protein L3P [Methanococcus maripaludis S2]
Length = 334
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/246 (18%), Positives = 82/246 (33%), Gaps = 58/246 (23%)
Query: 24 PVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSV----------- 72
PVTVL + V R +K + A+ + + +
Sbjct: 71 PVTVLETPDVTVAGIRLYEKTTKGLKALTEVWAEQLDSDLGRKLTLAKKEEKKTVDALDA 130
Query: 73 ------------NVSPKKKLFEFRVQKDDD----------------LLPVGSVFSPSYFT 104
+ +PK + + + + ++ F
Sbjct: 131 VLEKATEVRAIVHTNPKTTGIPKKKPEVVEIRIGGSSVAERLAYAKEILGKTLAISDVFE 190
Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
G+++D +T GKGF G++KR H R GS G + P RV +
Sbjct: 191 AGEIIDTLAITKGKGFQGSVKRWGIKVQFGKHQRKGVGRHTGSIGPWR-PRRVMWTVPLP 249
Query: 165 GRMGGNRVTVKNLEVVSVDDK-----------------RGLILVKGCVPGAKKNSWILVR 207
G+MG ++ T N ++ + + G ++VKG V G K +++R
Sbjct: 250 GQMGFHQRTEYNKRILKLGSEGAEITPKGGFLNYGAVKNGYVVVKGTVQGPAKR-LVVLR 308
Query: 208 DSFKSA 213
S ++A
Sbjct: 309 GSVRAA 314
>gi|48477712|ref|YP_023418.1| 50S ribosomal protein L3P [Picrophilus torridus DSM 9790]
gi|74567866|sp|Q6L1C7|RL3_PICTO RecName: Full=50S ribosomal protein L3P
gi|48430360|gb|AAT43225.1| large subunit ribosomal protein L3P [Picrophilus torridus DSM 9790]
Length = 329
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 52/275 (18%), Positives = 84/275 (30%), Gaps = 67/275 (24%)
Query: 5 VVARKLGMTCVYNIE--------GRRI--PVTVLHLDNCQVVVHRTLDK--NGYMAVQVG 52
K+GMT + ++ G+ I PVTV+ + V+ R + NG +
Sbjct: 42 FAGYKVGMTHIQMVDYRKNSVTAGQVIMAPVTVVEVPPLTVMSIRYYARGDNGLEVISEE 101
Query: 53 AGE-------AKVKNVSKPMRGFFSSVNVSP--KKKLFEFRVQKDDDLLPVGSVFSP--- 100
E ++ +++ +G V P
Sbjct: 102 WAENIDKDVLRRINKINRHKKGIEVKDVDDVRLMVHTNPQLVSGVPSKTPEIFEIRIGGS 161
Query: 101 --------------------SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSI 140
+ G VDV +T GKGF G +KR L +
Sbjct: 162 TIENRIKYAKERLGSNISFSDFSKPGNFVDVIAVTKGKGFQGVVKRFGVKLLPRKNRK-- 219
Query: 141 SHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK--------------- 185
HR T P V AG++G ++ T+ N+ ++ D K
Sbjct: 220 -HRRMIGTLGPWHPDWVRNTVPQAGQVGFHQRTIHNIRIIKFDTKDHVDDINVKGGFLNY 278
Query: 186 ----RGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
+L+ G VPG K I +RD +
Sbjct: 279 GIVRNDYVLLFGSVPGPAKR-LIKMRDPARQTRPA 312
>gi|150402715|ref|YP_001330009.1| 50S ribosomal protein L3P [Methanococcus maripaludis C7]
gi|166233157|sp|A6VHD2|RL3_METM7 RecName: Full=50S ribosomal protein L3P
gi|150033745|gb|ABR65858.1| ribosomal protein L3 [Methanococcus maripaludis C7]
Length = 334
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 46/253 (18%), Positives = 88/253 (34%), Gaps = 60/253 (23%)
Query: 19 EGRRI--PVTVLHLDNCQVVVHRTLDK----------------NGYMAVQVGAGEAKVKN 60
G+ + PVTVL + V R +K + + ++ + + K
Sbjct: 64 NGQEVFTPVTVLETPDVTVAGIRLYEKTTKGLKALTEVWAEQLDNDLGRKLTLVKKEEKK 123
Query: 61 VSKPMRGFFSSV-------NVSPKKKLFEFRVQKDDD----------------LLPVGSV 97
+ + + +PK + + + + ++
Sbjct: 124 TADALDAVLEKATEVRVIVHTNPKTTGIPKKKPEVVEIRIGGSSVAERLAYAKEILGKTL 183
Query: 98 FSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRV 157
F G+++D +T GKGF G++KR H R GS G + P RV
Sbjct: 184 AISDVFEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGKHQRKGVGRHTGSIGPWR-PRRV 242
Query: 158 FKNKKMAGRMGGNRVTVKNLEVVSVDDK-----------------RGLILVKGCVPGAKK 200
+ G+MG ++ T N ++ + + G ++VKG V G K
Sbjct: 243 MWTVPLPGQMGFHQRTEYNKRILKLGSEGAEITPKGGFLNYGAVKNGYVVVKGTVQGPAK 302
Query: 201 NSWILVRDSFKSA 213
+++R S ++A
Sbjct: 303 R-LVVLRGSVRAA 314
>gi|161616466|ref|YP_001590431.1| hypothetical protein SPAB_04281 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|161365830|gb|ABX69598.1| hypothetical protein SPAB_04281 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 72
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/73 (54%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Query: 140 ISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAK 199
+SHR GS G Q PG+VFK KKMAG+MG RVTV++L+VV VD +R L+LVKG VPGA
Sbjct: 1 MSHRVPGSIGQNQTPGKVFKGKKMAGQMGNERVTVQSLDVVRVDAERNLLLVKGGVPGA- 59
Query: 200 KNSWILVRDSFKS 212
++V+ + K+
Sbjct: 60 TGCDLIVKPAVKA 72
>gi|125580740|gb|EAZ21671.1| hypothetical protein OsJ_05302 [Oryza sativa Japonica Group]
Length = 116
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 49/109 (44%), Positives = 69/109 (63%), Gaps = 2/109 (1%)
Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
F G LVD++G +IGKGF G +KRHNF THG S SHR+ GS G PGRV+K K
Sbjct: 1 MFKEGDLVDISGKSIGKGFQGGIKRHNFKRGLMTHG-SKSHRALGSIGAGTTPGRVYKGK 59
Query: 162 KMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
KM GRMGG + ++ L++V +D+ ++++KG VPG N + + +
Sbjct: 60 KMPGRMGGTKTKIRKLKIVKIDNDLKVVMIKGAVPGKPGN-LLRIAPAK 107
>gi|134045079|ref|YP_001096565.1| 50S ribosomal protein L3P [Methanococcus maripaludis C5]
gi|166233156|sp|A4FVY2|RL3_METM5 RecName: Full=50S ribosomal protein L3P
gi|132662704|gb|ABO34350.1| LSU ribosomal protein L3P [Methanococcus maripaludis C5]
Length = 334
Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 47/253 (18%), Positives = 89/253 (35%), Gaps = 60/253 (23%)
Query: 19 EGRRI--PVTVLHLDNCQVVVHRTLDK----------------NGYMAVQVGAGEAKVKN 60
G+ + PVTVL + V R +K +G + ++ + + K
Sbjct: 64 NGQEVFTPVTVLETPDVTVAGIRLYEKTTKGLKALTEVWAEQLDGDLGRKLTLAKKEEKK 123
Query: 61 VSKPMRGFFSSV-------NVSPKKKLFEFRVQKDDD----------------LLPVGSV 97
+ + + +PK + + + + ++
Sbjct: 124 TADALDAVVEKATEVRAIVHTNPKTTGIPKKKPEVVEIRIGGSSVAERLAYAKEILGKTL 183
Query: 98 FSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRV 157
F G+++D +T GKGF G++KR H R GS G + P RV
Sbjct: 184 AIGDVFEAGEIIDTLAITKGKGFQGSVKRWGIKVQFGKHQRKGVGRHTGSIGPWR-PRRV 242
Query: 158 FKNKKMAGRMGGNRVTVKNLEVVSVDDK-----------------RGLILVKGCVPGAKK 200
+ G+MG ++ T N ++ + + G ++VKG V G K
Sbjct: 243 MWTVPLPGQMGFHQRTEYNKRILKLGSEGAEITPKGGFLNYGAVKNGYVVVKGTVQGPAK 302
Query: 201 NSWILVRDSFKSA 213
+++R S ++A
Sbjct: 303 R-LVVLRGSVRAA 314
>gi|229584895|ref|YP_002843397.1| 50S ribosomal protein L3P [Sulfolobus islandicus M.16.27]
gi|259709736|sp|C3N5S7|RL3_SULIA RecName: Full=50S ribosomal protein L3P
gi|228019945|gb|ACP55352.1| ribosomal protein L3 [Sulfolobus islandicus M.16.27]
Length = 351
Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 54/294 (18%), Positives = 95/294 (32%), Gaps = 87/294 (29%)
Query: 4 GVVARKLGMTCVYNIE--------GRRI--PVTVLHLD-----------------NCQVV 36
G V K+GM+ V+ I+ G+ I PVTVL + +
Sbjct: 44 GFVGYKVGMSHVFMIDDWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAVDGKGEPNVIT 103
Query: 37 VH----------------------RTLDKNGYMAVQVGAG-EAKVKNVSKPMRGFFSSVN 73
+ + + + G+ + N+ + +
Sbjct: 104 EYWSPSSLQFLDITRRIRSFSSFLKNDESKKKFEEKFGSKLDLIKSNLDRIVYFRLLVAT 163
Query: 74 VSPKKKLFEFRVQKDDDLLPVGSVFSP----------------SYFTVGQLVDVTGMTIG 117
K +V ++ G F GQL+DV G+T G
Sbjct: 164 QPRKIPSLGKKVPDLVEIQIGGGEKKAQLDYALNVLGKEISIKDVFKEGQLIDVVGVTKG 223
Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
KGF+G +KR++ L H R G+ G G++G +R T N
Sbjct: 224 KGFAGVIKRYSVVELPRWHKHRKGSRKIGTRGPSLGT---PSYTPQPGQLGFHRRTEYNK 280
Query: 178 EVVSV--DDK---------------RGLILVKGCVPGAKKNSWILVRDSFKSAV 214
++ + D K IL++G + G+KK I +R++ + +
Sbjct: 281 RIIKIGDDPKEINPAGGFVRYGIVRNTYILLEGSILGSKKRP-IFLREAVRPSY 333
>gi|18313001|ref|NP_559668.1| 50S ribosomal protein L3P [Pyrobaculum aerophilum str. IM2]
gi|42559672|sp|Q8ZW52|RL3_PYRAE RecName: Full=50S ribosomal protein L3P
gi|18160502|gb|AAL63850.1| ribosomal protein L3 [Pyrobaculum aerophilum str. IM2]
Length = 338
Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 41/141 (29%), Positives = 61/141 (43%), Gaps = 24/141 (17%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
FT GQLVDV +T GKG+ G +KR L H HR G+ G + V
Sbjct: 193 DVFTPGQLVDVIAVTKGKGYQGVIKRFGVTILPRWHKHRKGHRRTGTIGPQAPA--VMFT 250
Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKRG------------------LILVKGCVPGAKKNS 202
+ G+MG ++ T N ++ + + G IL++G VPGA+K
Sbjct: 251 QPRPGQMGFHQRTEYNKRLLKI-GENGAEITPKSGFPHYGVVKGPYILIQGSVPGARKRL 309
Query: 203 WIL---VRDSFKSAVNCKGKV 220
+L VR K+ + +V
Sbjct: 310 VVLRHPVRPPRKAPPAAEPQV 330
>gi|227830387|ref|YP_002832167.1| 50S ribosomal protein L3P [Sulfolobus islandicus L.S.2.15]
gi|229579206|ref|YP_002837604.1| 50S ribosomal protein L3P [Sulfolobus islandicus Y.G.57.14]
gi|229582042|ref|YP_002840441.1| 50S ribosomal protein L3P [Sulfolobus islandicus Y.N.15.51]
gi|284997894|ref|YP_003419661.1| ribosomal protein L3 [Sulfolobus islandicus L.D.8.5]
gi|259709738|sp|C3MQ59|RL3_SULIL RecName: Full=50S ribosomal protein L3P
gi|259709740|sp|C3NHA9|RL3_SULIN RecName: Full=50S ribosomal protein L3P
gi|259709741|sp|C3NEE3|RL3_SULIY RecName: Full=50S ribosomal protein L3P
gi|227456835|gb|ACP35522.1| ribosomal protein L3 [Sulfolobus islandicus L.S.2.15]
gi|228009920|gb|ACP45682.1| ribosomal protein L3 [Sulfolobus islandicus Y.G.57.14]
gi|228012758|gb|ACP48519.1| ribosomal protein L3 [Sulfolobus islandicus Y.N.15.51]
gi|284445789|gb|ADB87291.1| ribosomal protein L3 [Sulfolobus islandicus L.D.8.5]
Length = 351
Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 54/294 (18%), Positives = 95/294 (32%), Gaps = 87/294 (29%)
Query: 4 GVVARKLGMTCVYNIE--------GRRI--PVTVLHLD-----------------NCQVV 36
G V K+GM+ V+ I+ G+ I PVTVL + +
Sbjct: 44 GFVGYKVGMSHVFMIDDWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAVDGKGEPNVIT 103
Query: 37 VH----------------------RTLDKNGYMAVQVGAG-EAKVKNVSKPMRGFFSSVN 73
+ + + + G+ + N+ + +
Sbjct: 104 EYWSPSSLQFLDITRRIHSLSSFLKNDESKKKFEEKFGSKLDLIKSNLDRIVYFRLLVAT 163
Query: 74 VSPKKKLFEFRVQKDDDLLPVGSVFSP----------------SYFTVGQLVDVTGMTIG 117
K +V ++ G F GQL+DV G+T G
Sbjct: 164 QPRKIPSLGKKVPDLVEIQIGGGEKKAQLDYALNVLGKEISIKDVFKEGQLIDVVGVTKG 223
Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
KGF+G +KR++ L H R G+ G G++G +R T N
Sbjct: 224 KGFAGVIKRYSVVELPRWHKHRKGSRKIGTRGPSLGT---PSYTPQPGQLGFHRRTEYNK 280
Query: 178 EVVSV--DDK---------------RGLILVKGCVPGAKKNSWILVRDSFKSAV 214
++ + D K IL++G + G+KK I +R++ + +
Sbjct: 281 RIIKIGDDPKEINPAGGFVRYGIVRNTYILLEGSILGSKKRP-IFLREAVRPSY 333
>gi|227827691|ref|YP_002829471.1| 50S ribosomal protein L3P [Sulfolobus islandicus M.14.25]
gi|238619862|ref|YP_002914688.1| 50S ribosomal protein L3P [Sulfolobus islandicus M.16.4]
gi|259709737|sp|C4KHF6|RL3_SULIK RecName: Full=50S ribosomal protein L3P
gi|259709739|sp|C3MVH8|RL3_SULIM RecName: Full=50S ribosomal protein L3P
gi|227459487|gb|ACP38173.1| ribosomal protein L3 [Sulfolobus islandicus M.14.25]
gi|238380932|gb|ACR42020.1| ribosomal protein L3 [Sulfolobus islandicus M.16.4]
gi|323474749|gb|ADX85355.1| ribosomal protein L3 [Sulfolobus islandicus REY15A]
gi|323477477|gb|ADX82715.1| ribosomal protein L3 [Sulfolobus islandicus HVE10/4]
Length = 351
Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 54/294 (18%), Positives = 95/294 (32%), Gaps = 87/294 (29%)
Query: 4 GVVARKLGMTCVYNIE--------GRRI--PVTVLHLD-----------------NCQVV 36
G V K+GM+ V+ I+ G+ I PVTVL + +
Sbjct: 44 GFVGYKVGMSHVFMIDDWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAVDGKGEPNVIT 103
Query: 37 VH----------------------RTLDKNGYMAVQVGAG-EAKVKNVSKPMRGFFSSVN 73
+ + + + G+ + N+ + +
Sbjct: 104 EYWSPSSLQFLDITRRIHSFSSFLKNDESKKKFEEKFGSKLDLIKSNLDRIVYFRLLVAT 163
Query: 74 VSPKKKLFEFRVQKDDDLLPVGSVFSP----------------SYFTVGQLVDVTGMTIG 117
K +V ++ G F GQL+DV G+T G
Sbjct: 164 QPRKIPSLGKKVPDLVEIQIGGGEKKAQLDYALNVLGKEISIKDVFKEGQLIDVVGVTKG 223
Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
KGF+G +KR++ L H R G+ G G++G +R T N
Sbjct: 224 KGFAGVIKRYSVVELPRWHKHRKGSRKIGTRGPSLGT---PSYTPQPGQLGFHRRTEYNK 280
Query: 178 EVVSV--DDK---------------RGLILVKGCVPGAKKNSWILVRDSFKSAV 214
++ + D K IL++G + G+KK I +R++ + +
Sbjct: 281 RIIKIGDDPKEINPAGGFVRYGIVRNTYILLEGSILGSKKRP-IFLREAVRPSY 333
>gi|254173063|ref|ZP_04879737.1| ribosomal protein L3 [Thermococcus sp. AM4]
gi|214033219|gb|EEB74047.1| ribosomal protein L3 [Thermococcus sp. AM4]
Length = 346
Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 52/295 (17%), Positives = 87/295 (29%), Gaps = 85/295 (28%)
Query: 2 RSGVVARKLGMTCVYNIE-------GRRI--PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
G K GMT + I+ G+ I PVT++ + V R K GY+ ++
Sbjct: 38 MLGFAGYKAGMTHILMIDDSPGLTKGKEIFVPVTIVEVPPLFVYGIRAY-KQGYLGLETA 96
Query: 53 A----------------------------------------GEAKVKNVSKPMRGFFSSV 72
GE + + + +
Sbjct: 97 TEVWFHELNDNVKRRIKTLPKNYGEEDFKAKLGQLEDLVNDGEIVDVRLLVHTQPWLIKL 156
Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSV------FSPSYFTVGQLVDVTGMTIGKGFSGAMKR 126
P+ + + G+L+DV +T GKG G +KR
Sbjct: 157 KKKPEVMEYAIGGDDVKAKFDYAKEKIGKELRASEVLHEGELLDVIAVTKGKGTQGPVKR 216
Query: 127 HNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKR 186
+ R G+ G P RV AG+MG + T N ++++ +
Sbjct: 217 WGIKVQFHKAQRAGKGRHVGNLGP-WHPARVMWTVPQAGQMGFHHRTEFNKRLIAI-GEN 274
Query: 187 G--------------------------LILVKGCVPGAKKNSWILVRDSFKSAVN 215
G ++++G VPGA K I VR + +
Sbjct: 275 GKLILNGNEIEITPKGGFPHYGVIRSDFLMIEGSVPGAFKR-IIRVRPAIRPPKK 328
>gi|150401236|ref|YP_001325002.1| 50S ribosomal protein L3P [Methanococcus aeolicus Nankai-3]
gi|166233154|sp|A6UV68|RL3_META3 RecName: Full=50S ribosomal protein L3P
gi|150013939|gb|ABR56390.1| ribosomal protein L3 [Methanococcus aeolicus Nankai-3]
Length = 333
Score = 85.0 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 19/130 (14%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
FT G+ +D +T GKGF G +KR H R GS G P R+
Sbjct: 186 DVFTGGEFIDTVAITKGKGFQGPVKRWGIKIQFGKHQNKGVGRHTGSIGP-WTPKRIMWT 244
Query: 161 KKMAGRMGGNRVTVKNLEVVSV-----------------DDKRGLILVKGCVPGAKKNSW 203
MAG++G ++ T N ++ + K +LVKG V G K
Sbjct: 245 VPMAGQVGFHQRTEYNKRILKIGENGSEIVPKGGFLNYGVVKNNYVLVKGSVQGPAKR-M 303
Query: 204 ILVRDSFKSA 213
+++R++ ++
Sbjct: 304 VVLREAIRNP 313
>gi|119873281|ref|YP_931288.1| 50S ribosomal protein L3P [Pyrobaculum islandicum DSM 4184]
gi|212288410|sp|A1RVG3|RL3_PYRIL RecName: Full=50S ribosomal protein L3P
gi|119674689|gb|ABL88945.1| LSU ribosomal protein L3P [Pyrobaculum islandicum DSM 4184]
Length = 342
Score = 84.7 bits (208), Expect = 8e-15, Method: Composition-based stats.
Identities = 41/141 (29%), Positives = 60/141 (42%), Gaps = 24/141 (17%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
FT GQLVDV +T GKG+ G +KR L H HR G+ G + V
Sbjct: 197 EVFTAGQLVDVIAVTKGKGYQGVIKRFGVTILPRWHKHRKGHRRTGTIGPQAPA--VMFT 254
Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKRG------------------LILVKGCVPGAKKNS 202
+ G+MG ++ T N ++ + G IL++G VPGA+K
Sbjct: 255 QPRPGQMGFHQRTEYNKRIIKI-GDNGAEITPKSGFLHYGVVKGPYILIQGTVPGARKRL 313
Query: 203 WIL---VRDSFKSAVNCKGKV 220
+L VR K+ + +V
Sbjct: 314 VVLRYPVRPPKKAPPAAEPQV 334
>gi|182418827|ref|ZP_02950092.1| 50S ribosomal protein L3 [Clostridium butyricum 5521]
gi|182377324|gb|EDT74885.1| 50S ribosomal protein L3 [Clostridium butyricum 5521]
Length = 77
Score = 84.7 bits (208), Expect = 8e-15, Method: Composition-based stats.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 134 ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKG 193
THG S HR+ GS G DP R FKNK+M G MG TV NL+VV V ++ LIL+KG
Sbjct: 1 MTHG-SKFHRAPGSMGASSDPSRTFKNKRMPGHMGSVNTTVLNLQVVKVIAEKNLILIKG 59
Query: 194 CVPGAKKNSWILVRDSFKS 212
+PG K + + ++++ ++
Sbjct: 60 GIPGPNKGTVV-IKNTVRA 77
>gi|29027489|gb|AAO61962.1| ribosomal protein L3 [Aster yellows phytoplasma]
Length = 81
Score = 84.7 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 35/59 (59%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
SG++ + +GMT +Y+ G +P +++ C V+ +T +K+GY + Q+G E K N
Sbjct: 3 MSGIIGKNIGMTSIYDESGFNVPCSIIEAGPCIVLQIKTKEKDGYNSCQLGFDEKKNTN 61
>gi|255017639|ref|ZP_05289765.1| 50S ribosomal protein L3 [Listeria monocytogenes FSL F2-515]
Length = 79
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/82 (46%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
HG S HR GS G P RVFKNK + GRMGG ++T++NLE+V VD ++ ++LV
Sbjct: 1 GPMAHG-SRYHRRPGSMGPVA-PNRVFKNKLLPGRMGGEQITIQNLEIVKVDVEKNVLLV 58
Query: 192 KGCVPGAKKNSWILVRDSFKSA 213
KG VPGAKK + + ++ + K+
Sbjct: 59 KGNVPGAKK-ALVQIKTATKAK 79
>gi|169929958|gb|ACB05656.1| 50S ribosomal protein L3 [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
Length = 94
Score = 83.5 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/92 (45%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
+ GKG G +KRH F G A HG S R GS G PGRVFK KM GRMG + TV
Sbjct: 1 SKGKGTQGVVKRHGFAGGPAGHG-SRFQRHPGSIGSNTTPGRVFKGLKMGGRMGSEQTTV 59
Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKNSWILV 206
+NL+VV +D L+ V G VPG ++ + +
Sbjct: 60 RNLKVVKIDADANLVFVSGPVPG-RERGIVTI 90
>gi|73667662|ref|YP_303677.1| 50S ribosomal protein L3P [Methanosarcina barkeri str. Fusaro]
gi|109893521|sp|Q46G95|RL3_METBF RecName: Full=50S ribosomal protein L3P
gi|72394824|gb|AAZ69097.1| LSU ribosomal protein L3P [Methanosarcina barkeri str. Fusaro]
Length = 337
Score = 83.5 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 51/294 (17%), Positives = 80/294 (27%), Gaps = 84/294 (28%)
Query: 4 GVVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53
G K+GMT V ++ +PVT++ R Y G
Sbjct: 41 GFAGYKVGMTHVIMVDDTKNSLTQGMEISVPVTIIETP-----AIRVAAIRAYAEDTAGE 95
Query: 54 GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP------------- 100
+ PK + ++ G V
Sbjct: 96 KAIAEVWATDLDPE-LKRRIPVPKGDNMAETLGNIGKMIEEGKVSDIRAVTYTLPKSLTG 154
Query: 101 ------------------------------------SYFTVGQLVDVTGMTIGKGFSGAM 124
F G L+D +TIGKG G
Sbjct: 155 VPKKTPDIMESGISARDLNTKFEYAKSILGTLVSITDVFKTGTLIDTAAITIGKGTQGPA 214
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-- 182
KR ++ H S R G+ G RV G+ G ++ T N ++ +
Sbjct: 215 KRWGIQLMKGKHSRQGSLRQIGTLGGFG-LRRVSWRVPQMGQTGYHQRTEFNKRILKIGS 273
Query: 183 DDKR---------------GLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKVS 221
D + +L+KG VPG K I +RD ++ G+ +
Sbjct: 274 DGEEVTPEGGFINYGLVRGDYVLIKGSVPGPSKR-LIRLRDPIRAKKADLGEPN 326
>gi|14591535|ref|NP_143617.1| 50S ribosomal protein L3P [Pyrococcus horikoshii OT3]
gi|6094075|sp|O59418|RL3_PYRHO RecName: Full=50S ribosomal protein L3P
gi|3258212|dbj|BAA30895.1| 362aa long hypothetical 50S ribosomal protein L3 [Pyrococcus
horikoshii OT3]
Length = 362
Score = 83.5 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 56/312 (17%), Positives = 91/312 (29%), Gaps = 103/312 (33%)
Query: 2 RSGVVARKLGMTCVYNIE-------GRRI--PVTVLHLDNCQVVVHRTL----------- 41
G K GMT + I+ G+ I PVT++ +V R
Sbjct: 38 MLGFAGYKAGMTHILMIDDEPGLTNGKEIFMPVTIIETPPLRVFGIRAYRQGYLGLETAG 97
Query: 42 -------DKNGYMAVQVGAG---------------------------------------- 54
+ + Y + G G
Sbjct: 98 EVIVPDFELDNYTPSKKGKGRKFTFYQFLGRRIATLPKDYTQEEFEQKLGALEDMIKEGE 157
Query: 55 --EAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVG---SVFSPSYFTVGQLV 109
E + ++P + + V++ + + + G+L+
Sbjct: 158 IVEVRALVSTQPWVIKLKKKPEVMEYAIGGTSVEEKFNYIKEKLGKEIRVGEVLKEGELL 217
Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169
DV +T GKG G +KR H S R GS G P RV MAG+MG
Sbjct: 218 DVIAVTKGKGTQGPVKRWGIKLRA--HKDSKGRRKVGSIGP-WHPARVMWTVPMAGQMGF 274
Query: 170 NRVTVKNLEVVSVDDKRG--------------------------LILVKGCVPGAKKNSW 203
+ T N ++++ + G +++ G VPGA K
Sbjct: 275 HHRTELNKRLIAI-GENGKLVIDGNEIEITPKGGFPHYGIVRGDFMMIAGSVPGAIKR-I 332
Query: 204 ILVRDSFKSAVN 215
I VR + +
Sbjct: 333 IRVRPAIRPPKK 344
>gi|313631759|gb|EFR98952.1| ribosomal protein L3 [Listeria seeligeri FSL N1-067]
Length = 93
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/91 (43%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 98 FSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRV 157
F G ++D TG++ GKGF G +KRH HG S HR GS G P RV
Sbjct: 3 VKVDVFAEGDIIDATGVSKGKGFQGVIKRHGQSRGPMAHG-SRYHRRPGSMGPVA-PNRV 60
Query: 158 FKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL 188
FKNK + GRMGG ++T++NLE+V VD ++ +
Sbjct: 61 FKNKLLPGRMGGEQITIQNLEIVKVDVEKNV 91
>gi|94993442|ref|YP_601540.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS10750]
gi|94546950|gb|ABF36996.1| LSU ribosomal protein L3P [Streptococcus pyogenes MGAS10750]
Length = 78
Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 46/81 (56%), Positives = 57/81 (70%), Gaps = 3/81 (3%)
Query: 134 ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKG 193
HG S HR GS G P RVFKNK++AGRMGGNRVTV+NLE+V V ++ +ILVKG
Sbjct: 1 MAHG-SRYHRRPGSMGPVA-PNRVFKNKRLAGRMGGNRVTVQNLEIVQVIPEKNVILVKG 58
Query: 194 CVPGAKKNSWILVRDSFKSAV 214
VPGAKK S I ++ + K+A
Sbjct: 59 NVPGAKK-SLITIKSAVKAAK 78
>gi|57641477|ref|YP_183955.1| 50S ribosomal protein L3P [Thermococcus kodakarensis KOD1]
gi|73917495|sp|Q5JDJ0|RL3_PYRKO RecName: Full=50S ribosomal protein L3P
gi|57159801|dbj|BAD85731.1| LSU ribosomal protein L3P [Thermococcus kodakarensis KOD1]
Length = 346
Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 54/295 (18%), Positives = 92/295 (31%), Gaps = 85/295 (28%)
Query: 2 RSGVVARKLGMTCVYNIE-------GRRI--PVTVLHLDNCQVVVHRTLDKNGY------ 46
G K GMT + I+ G+ I PVT++ + V R K GY
Sbjct: 38 MLGFAGYKAGMTHILMIDDSPGLTKGKEIFVPVTIVEVPPLFVYGIRAY-KQGYLGLETA 96
Query: 47 ------MAVQVGAGEAKVKNVSKPMRGFFSS--------------------------VNV 74
+ A K + F + + +
Sbjct: 97 TEVWFHDLHKNVARRIKTLPKNYNEEAFQAKLGQLEDLVNDGEIADVRLLVHTQPWLIGL 156
Query: 75 SPKKKLFEFRVQKDD--------DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKR 126
K ++ E+ + DD + + G+L+DV +T GKG G +KR
Sbjct: 157 KKKPEVMEYAIGGDDVKAKFDYAKEKIGKELRAGEVLHEGELLDVIAVTKGKGTQGPVKR 216
Query: 127 HNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKR 186
+ R G+ G P RV AG+MG + T N ++++ +
Sbjct: 217 WGVKVQFHKAQRAGKGRHIGNLGP-WHPARVMWTVPQAGQMGFHHRTEFNKRLIAI-GEN 274
Query: 187 G--------------------------LILVKGCVPGAKKNSWILVRDSFKSAVN 215
G ++++G +PG+ K I VR + +
Sbjct: 275 GKLVLDGNEIEITPKGGFPHYGIVRSDFLMIEGTIPGSFKR-IIRVRPAIRPPKK 328
>gi|70951495|ref|XP_744983.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56525155|emb|CAH78805.1| hypothetical protein PC001313.02.0 [Plasmodium chabaudi chabaudi]
Length = 185
Score = 82.7 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 45/129 (34%), Positives = 67/129 (51%), Gaps = 3/129 (2%)
Query: 89 DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGV-SISHRSHGS 147
D LPV FS +F+ GQ + ++ KGF GAM++ NF G +HG S +HRS GS
Sbjct: 10 DCFLPVQHKFSARHFSPGQNLFISSSIKNKGFCGAMQKWNFSGKNQSHGTESKAHRSLGS 69
Query: 148 TGCRQDPGRVFKNKKMAGRMGGNR-VTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILV 206
+ VF+NKKM +G V N ++ ++ + L+ +KG + G KN I +
Sbjct: 70 VSMGKTINIVFRNKKMNTHIGEKSLVKCSNNKLFRINSLKNLLFIKGTI-GGYKNKIIKI 128
Query: 207 RDSFKSAVN 215
D+ A N
Sbjct: 129 SDAKGRAFN 137
>gi|209528359|ref|ZP_03276810.1| 50S ribosomal protein L3 [Arthrospira maxima CS-328]
gi|209491212|gb|EDZ91616.1| 50S ribosomal protein L3 [Arthrospira maxima CS-328]
Length = 79
Score = 82.0 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 137 GVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVP 196
S +HR GS G PGRV+ KKMAGR GG ++T + L +V +D +R L+L+KG +P
Sbjct: 2 HGSKNHRLPGSIGPGTTPGRVYPGKKMAGRYGGKQITTRKLTIVRIDLERNLLLIKGSIP 61
Query: 197 GAKKNSWILVRDS 209
G + ++ +
Sbjct: 62 GKP-GGLLNIKPA 73
>gi|150399607|ref|YP_001323374.1| 50S ribosomal protein L3P [Methanococcus vannielii SB]
gi|9910844|sp|Q9UWG2|RL3_METVA RecName: Full=50S ribosomal protein L3P
gi|166233160|sp|A6UQJ0|RL3_METVS RecName: Full=50S ribosomal protein L3P
gi|150012310|gb|ABR54762.1| ribosomal protein L3 [Methanococcus vannielii SB]
Length = 334
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 19/130 (14%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
F G+ +D +T GKGF G +KR H R GS G + P RV
Sbjct: 187 DVFETGEFIDTLAVTKGKGFQGPVKRWGVKIQFGKHQRKGVGRQTGSIGPWR-PKRVMWT 245
Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDK-----------------RGLILVKGCVPGAKKNSW 203
+AG+MG ++ T N ++ + + G ++VKG V G K
Sbjct: 246 VPLAGQMGFHQRTEYNKRILKLGSEGAEITPKGGFLNYGAVKNGYVVVKGTVQGPAKR-L 304
Query: 204 ILVRDSFKSA 213
+++R + + A
Sbjct: 305 VVLRGAVRPA 314
>gi|170516812|gb|ACB15214.1| ribosomal protein L3 [uncultured marine group II euryarchaeote
DeepAnt-15E7]
Length = 358
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 59/138 (42%), Gaps = 23/138 (16%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
+ GQ +DV G+T GKG+ GA+KR L +H S R G+ G V K
Sbjct: 213 DVYETGQEIDVVGVTKGKGWQGAIKRWGIKLL--SHKNSKRRRQGGNMGDFGTGY-VRKT 269
Query: 161 KKMAGRMGGNRVTVKNLEVVSV-DDKRG-----------------LILVKGCVPGAKKNS 202
+ AG++G + T N ++ V + + ++++G +PG K
Sbjct: 270 IRQAGQVGYHNRTELNKRILRVSNPEESDITPSGGFLNYGEVTNPYMIIQGSLPGPSKR- 328
Query: 203 WILVRDSFKSAVNCKGKV 220
+ RD+ + K +V
Sbjct: 329 ILRFRDAIRP-RPAKPEV 345
Score = 40.4 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 15/71 (21%), Positives = 20/71 (28%), Gaps = 15/71 (21%)
Query: 4 GVVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53
G K GMT + + R VTV+ V+ R GY G
Sbjct: 42 GFAGWKAGMTHLLVRDNNPNSSSAQQEVRKAVTVVEAPPMSVLAVR-----GYRMTPYGM 96
Query: 54 GEAKVKNVSKP 64
A +
Sbjct: 97 QTAGEAWFNSD 107
>gi|240104060|ref|YP_002960369.1| 50S ribosomal protein L3P [Thermococcus gammatolerans EJ3]
gi|259709743|sp|C5A286|RL3_THEGJ RecName: Full=50S ribosomal protein L3P
gi|239911614|gb|ACS34505.1| LSU ribosomal protein L3P (rpl3P) [Thermococcus gammatolerans EJ3]
Length = 346
Score = 81.6 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 51/290 (17%), Positives = 86/290 (29%), Gaps = 85/290 (29%)
Query: 2 RSGVVARKLGMTCVYNIE-------GRRI--PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
G K GMT + I+ G+ I PVT++ + V R K GY+ ++
Sbjct: 38 MLGFAGYKAGMTHILMIDDSPGLTKGKEIFVPVTIVEVPPLFVYGIRAY-KQGYLGLETA 96
Query: 53 A----------------------------------------GEAKVKNVSKPMRGFFSSV 72
GE + + + +
Sbjct: 97 TEVWFHELNDNVKRRIKTLPKNYGEEDFKAKLGQLEDLVNDGEIVDVRLLVHTQPWLIKL 156
Query: 73 NVSPKKKLFEFRVQKDDDLLPVGSVF------SPSYFTVGQLVDVTGMTIGKGFSGAMKR 126
P+ + + G+L+DV +T GKG G +KR
Sbjct: 157 KKKPEVMEYAIGGDDVKAKFEYAKERIGKEIRASEVLHEGELLDVIAVTKGKGTQGPVKR 216
Query: 127 HNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKR 186
+ R G+ G P RV AG+MG + T N ++++ +
Sbjct: 217 WGVKVQFHKAQRAGKGRHIGNLGP-WHPARVMWTVPQAGQMGFHHRTEFNKRLIAI-GEN 274
Query: 187 G--------------------------LILVKGCVPGAKKNSWILVRDSF 210
G ++++G VPG+ K I VR +
Sbjct: 275 GKLVLNGNEIDITPKGGFPHYGIIRSDFLMIEGSVPGSFKR-IIRVRPAI 323
>gi|193084205|gb|ACF09869.1| ribosomal protein L3 [uncultured marine group II euryarchaeote
KM3-136-D10]
Length = 342
Score = 81.6 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 50/287 (17%), Positives = 88/287 (30%), Gaps = 80/287 (27%)
Query: 4 GVVARKLGMTCVY--NIE------GRRI--PVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53
G K GM+ V + G+ I VT++ Q++ R + Y G
Sbjct: 42 GFAGYKAGMSHVLIRDENPGSPSAGQEIRKAVTIVETPPLQILGIRGYHQTYYGKQTAGE 101
Query: 54 GEAK---------------VKNVSKPMRGFFS-------------------------SVN 73
A + +
Sbjct: 102 AWASGEEIAEAQPNLVRRVPARNTHDTEEHITALKEMAEKGQLCEVRLIVSTQPSKVKSI 161
Query: 74 VSPKKKLFEFRVQKDD--------DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
+ + E + D + ++ F+ G +DV +T GKG+ G++K
Sbjct: 162 PTKTPNIMELGLNGSDITSRIAWAEERLGQTLKVSDVFSNGNDLDVIAVTKGKGWQGSIK 221
Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV--- 182
R L +H S R G+ G V K + AG+ G ++ T N +V+ +
Sbjct: 222 RWGIKLL--SHKNSKRRRQGGNMGDFGTGY-VRKTIRQAGQTGYHQRTEYNKKVIRISSP 278
Query: 183 DDK---------------RGLILVKGCVPGAKKNSWILVRDSFKSAV 214
D+ I+V+G +PG K + R+S +
Sbjct: 279 DEDEVTPDGGFLRYGEVTNDYIIVQGSLPGPSKR-LLRFRESVRPRK 324
>gi|169929925|gb|ACB05634.1| 50S ribosomal protein L3 [Leptospira santarosai serovar Tropica]
gi|169929928|gb|ACB05636.1| 50S ribosomal protein L3 [Leptospira santarosai serovar Shermani]
Length = 93
Score = 81.6 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
+ G+G+ G +KRH G S HR GS G P RVFK K+ GR G + T+
Sbjct: 1 SKGRGYQGVVKRHGHAGGPGG-HGSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSQQTTI 59
Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKNSWILV 206
+NL+VV +++++ L+ V G +PG + N+ I +
Sbjct: 60 RNLKVVRINEEKNLLFVSGSIPGTE-NTVITI 90
>gi|325969277|ref|YP_004245469.1| 50S ribosomal protein L3P [Vulcanisaeta moutnovskia 768-28]
gi|323708480|gb|ADY01967.1| 50S ribosomal protein L3P [Vulcanisaeta moutnovskia 768-28]
Length = 342
Score = 81.6 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 52/287 (18%), Positives = 90/287 (31%), Gaps = 74/287 (25%)
Query: 1 MRSGVVARKLGMTC-VYNIEG--------RRI-PVTVLHLDNCQVVVHRTLDKNGYMAVQ 50
M G VA K GM V+ + I PVT+L +V+ + + + ++
Sbjct: 40 MLLGFVAYKAGMAHAVFIDDRPTSPFYSKEVIKPVTILDSPPIKVIAFKAYTYDPWKNLK 99
Query: 51 VGAGEAKVKNVSKPM-------RGFFSSVNVSPKKKLFEFRVQKD--------------- 88
+ GE + +V K + F+ + K + +
Sbjct: 100 LSLGEVWMPDVPKDIARKIPTLPEKFNKEEMMKKILDNVDVITEIRALVATQPRLSGIGK 159
Query: 89 ----------------------DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKR 126
D + + F GQ VDV +T GKG G +KR
Sbjct: 160 KTPELLEIPIGGVDDINQLIKYADSILGKDINVTDVFNEGQYVDVAAITKGKGLQGVVKR 219
Query: 127 HNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV---- 182
N L H +R G+ G + + G+MG ++ T N ++ +
Sbjct: 220 FNVKILPKWHKHRKGYRRIGAIGPQNPA--LAFTTPRPGQMGLHKRTEYNKRILKIGLNG 277
Query: 183 -------------DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
K + ++G VPG K + +R +
Sbjct: 278 AEVTPSSGFPHYGIVKGPYMALEGSVPGIVKR-LVTLRFPVRPRPPT 323
>gi|146319921|ref|YP_001199632.1| ribosomal protein L3 [Streptococcus suis 98HAH33]
gi|145690727|gb|ABP91232.1| Ribosomal protein L3 [Streptococcus suis 98HAH33]
Length = 78
Score = 81.6 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 43/81 (53%), Positives = 54/81 (66%), Gaps = 3/81 (3%)
Query: 134 ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKG 193
HG S HR GS G P RVFK K +AGRMGGNRVT++NLEVV V ++ +IL+KG
Sbjct: 1 MAHG-SRYHRRPGSMGPVA-PNRVFKGKNLAGRMGGNRVTIQNLEVVQVVPEKNVILIKG 58
Query: 194 CVPGAKKNSWILVRDSFKSAV 214
VPGAKK S I ++ + K+
Sbjct: 59 NVPGAKK-SLITIKSAVKAGK 78
>gi|169929931|gb|ACB05638.1| 50S ribosomal protein L3 [Leptospira noguchii serovar Proechymis]
gi|169929934|gb|ACB05640.1| 50S ribosomal protein L3 [Leptospira noguchii serovar Panama]
Length = 93
Score = 81.2 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
+ G+G+ G +KRH G S HR GS G P RVFK K+ GR G + TV
Sbjct: 1 SKGRGYQGVVKRHGHAGGPGA-HGSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSQQTTV 59
Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKNSWILV 206
+NL+VV +++++ L+ V G VPG N+ I +
Sbjct: 60 RNLKVVRINEEKNLLFVSGAVPGTA-NTVITI 90
>gi|15790632|ref|NP_280456.1| 50S ribosomal protein L3P [Halobacterium sp. NRC-1]
gi|169236371|ref|YP_001689571.1| 50S ribosomal protein L3P [Halobacterium salinarum R1]
gi|42559695|sp|Q9HPD4|RL3_HALSA RecName: Full=50S ribosomal protein L3P
gi|226725182|sp|B0R656|RL3_HALS3 RecName: Full=50S ribosomal protein L3P
gi|10581159|gb|AAG19936.1| 50S ribosomal protein L13P [Halobacterium sp. NRC-1]
gi|167727437|emb|CAP14225.1| ribosomal protein L3 [Halobacterium salinarum R1]
Length = 335
Score = 81.2 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 30/133 (22%), Positives = 50/133 (37%), Gaps = 18/133 (13%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
F G+ D G+T GKG G +KR + H R G+ G +P RV
Sbjct: 190 DVFRAGEFTDAAGITKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGP-WNPSRVRST 248
Query: 161 KKMAGRMGGNRVTVKNLEVVSVD----------------DKRGLILVKGCVPGAKKNSWI 204
G+ G ++ T N ++ ++ LVKG VPG ++ +
Sbjct: 249 VPQQGQTGYHQRTELNKRLIDINDGDEPTPDGGFPNYGEVDGPYTLVKGSVPGPEQR-LV 307
Query: 205 LVRDSFKSAVNCK 217
R + + + +
Sbjct: 308 RFRPAVRPNESPR 320
>gi|2425176|dbj|BAA22270.1| ribosomal protein L3 [Halobacterium salinarum]
Length = 330
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/280 (15%), Positives = 73/280 (26%), Gaps = 73/280 (26%)
Query: 5 VVARKLGMTCVYNIEGRR----------IPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG 54
K GMT V ++ + +PVTV + R + Y +
Sbjct: 42 FAGYKAGMTHVVLVDDKANAPTEGMETTVPVTV-ETPPMR--AVRLYEDTPYGKKPLTEV 98
Query: 55 EAKVKN---------------------------------VSKPMRGFFSSVNVSPKKKLF 81
A + +P
Sbjct: 99 WADDTHESLDRTLSVPTRRVTDELIEALDTEEIADIRVITHTVPGDHAGVPKKNPDVMET 158
Query: 82 EFRVQKDDDLLPVGSVFSPS--------YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLR 133
D L + F G+ D G+T GKG G +KR +
Sbjct: 159 RVGGGTLADRLEFAADLIEDGGVHAFGDVFRAGEFADAAGITKGKGTQGPVKRWGVQKRK 218
Query: 134 ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD---------- 183
H ++ R +P RV G+ G ++ T N ++ ++
Sbjct: 219 GKHARHVARRIGNLGP--WNPSRVRSTVPQQGQTGYHQRTELNKRLIDINDGDEPSPDGG 276
Query: 184 ------DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
LVKG VPG ++ + R + + +
Sbjct: 277 FPNYGEVDGPYTLVKGSVPGPEQR-LVRFRLGVRPNESPR 315
>gi|261884192|ref|ZP_06008231.1| 50S ribosomal protein L3 [Campylobacter fetus subsp. venerealis
str. Azul-94]
Length = 153
Score = 80.4 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/164 (26%), Positives = 67/164 (40%), Gaps = 14/164 (8%)
Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
+ K+GM+ + PVT+L L +V + G V +A K +
Sbjct: 4 IVEKIGMSR--TVSAPSTPVTLLRLVPAKVCEL---GEGGKAIVAYAHTKADNKAIKGQQ 58
Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
+ + S + L + D + +++ V+ T G+GF G +K
Sbjct: 59 KKYGLSSEFNSFATLSVANSEAGD--------LDVNPLNEAKVLKVSFNTKGRGFQGVIK 110
Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGG 169
RH F A+HG S HR GS G + PGRV +KMAG G
Sbjct: 111 RHGFLCGPASHG-SRFHRRPGSIGNCEWPGRVQPGRKMAGHYGN 153
>gi|169929907|gb|ACB05622.1| 50S ribosomal protein L3 [Leptospira interrogans serovar Lai]
gi|169929910|gb|ACB05624.1| 50S ribosomal protein L3 [Leptospira interrogans serovar
Icterohaemorrhagiae]
gi|169929913|gb|ACB05626.1| 50S ribosomal protein L3 [Leptospira interrogans serovar
Hardjo-prajitno]
gi|169929916|gb|ACB05628.1| 50S ribosomal protein L3 [Leptospira interrogans serovar Malaya]
gi|169929943|gb|ACB05646.1| 50S ribosomal protein L3 [Leptospira kirschneri serovar Mozdok]
gi|169929946|gb|ACB05648.1| 50S ribosomal protein L3 [Leptospira kirschneri serovar Bim]
Length = 93
Score = 80.4 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 36/92 (39%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
+ G+G+ G +KRH G S HR GS G P RVFK K+ GR G + TV
Sbjct: 1 SKGRGYQGVVKRHGHAGGPGA-HGSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSQKTTV 59
Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKNSWILV 206
+NL+VV +++++ L+ V G VPG N+ I +
Sbjct: 60 RNLKVVRINEEKNLLFVSGAVPGTA-NTVITI 90
>gi|126178514|ref|YP_001046479.1| 50S ribosomal protein L3P [Methanoculleus marisnigri JR1]
gi|166233158|sp|A3CSZ7|RL3_METMJ RecName: Full=50S ribosomal protein L3P
gi|125861308|gb|ABN56497.1| LSU ribosomal protein L3P [Methanoculleus marisnigri JR1]
Length = 337
Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 32/126 (25%), Positives = 48/126 (38%), Gaps = 19/126 (15%)
Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
VG+ VDVT +T GKG G +KR + H R G+ G P V
Sbjct: 193 LEVGEYVDVTAVTTGKGTEGPVKRWGVQVRKRKHSRGGKKRHIGNLGP-WHPHHVRWQVP 251
Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRG-----------------LILVKGCVPGAKKNSWIL 205
G+MG + T N ++ + +L+KG VPG K +
Sbjct: 252 QMGQMGYQQRTEFNKRILKIGADGDEITPAGGFLHYGLVRGPYVLIKGSVPGPNKR-LVR 310
Query: 206 VRDSFK 211
+R + +
Sbjct: 311 IRSAIR 316
>gi|71984544|ref|NP_001021255.1| Ribosomal Protein, Large subunit family member (rpl-3)
[Caenorhabditis elegans]
gi|50507483|emb|CAH04729.1| C. elegans protein F13B10.2c, confirmed by transcript evidence
[Caenorhabditis elegans]
gi|51011806|emb|CAH10799.1| C. elegans protein F13B10.2c, confirmed by transcript evidence
[Caenorhabditis elegans]
Length = 353
Score = 80.0 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/260 (16%), Positives = 75/260 (28%), Gaps = 57/260 (21%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVHR--TLDKNGYMAVQ 50
+ + K GMT + + G ++ VT++ + G A+
Sbjct: 44 TAFLGYKAGMTHIVRDVDKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALT 103
Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGS-------VFSPSYF 103
E + + ++ K + +D L S
Sbjct: 104 TIWAEHLSEEARRRFYSNWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVI 163
Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163
Q++D G+T G GF G R + L R G P RV
Sbjct: 164 AHTQMIDTIGVTRGHGFKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVAFTVAR 220
Query: 164 AGRMGGNRVTVKNLEVVSV-------DDKRG---------------------------LI 189
AG+ G + T+ N ++ + + K I
Sbjct: 221 AGQKGFHHRTIINNKIYRIGKSALTEEGKNNGSTEFDLTQKTITPMGGFPRYGIVNQDYI 280
Query: 190 LVKGCVPGAKKNSWILVRDS 209
+++G V G KK I +R S
Sbjct: 281 MLRGAVLGPKKR-LITLRKS 299
>gi|169929919|gb|ACB05630.1| 50S ribosomal protein L3 [Leptospira borgpetersenii serovar
Hardjo-bovis]
gi|169929922|gb|ACB05632.1| 50S ribosomal protein L3 [Leptospira borgpetersenii serovar
Hardjo-bovis]
gi|169929955|gb|ACB05654.1| 50S ribosomal protein L3 [Leptospira meyeri serovar Ranarum]
Length = 93
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
+ G+GF G +KRH G S HR GS G P RVFK K+ GR G + TV
Sbjct: 1 SKGRGFQGVVKRHGHAGGPGG-HGSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSQQTTV 59
Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKNSWILV 206
+NL+VV +++++ L+ V G VPG N+ I +
Sbjct: 60 RNLKVVRINEEKNLVFVSGAVPG-TTNTVITI 90
>gi|32262929|gb|AAP77975.1| ribosomal protein L3 [Helicobacter hepaticus ATCC 51449]
Length = 183
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 57/189 (30%), Positives = 85/189 (44%), Gaps = 15/189 (7%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS 71
M+ + VT+L + +V NG V G+ +V+K + G
Sbjct: 1 MSRTIGT--KSEAVTLLRVLGAKVCEIYD---NGKALVAYSQGK----SVNKAIAGQQKK 51
Query: 72 VNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGG 131
++S + F + + + + V V+ T G+GFSGAMKR NF G
Sbjct: 52 YSLSKEFNRFATLKVSN----KEVGELDVASLSEAKRVQVSFKTKGRGFSGAMKRWNFQG 107
Query: 132 LRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILV 191
HG S HR GS G R+ PGRV KKMAG G V+ KN +++S D + ++++
Sbjct: 108 GPGAHG-SRFHRRLGSIGNREWPGRVQPGKKMAGHYGNELVSAKN-DIMSFDKQSAILVL 165
Query: 192 KGCVPGAKK 200
KG V G
Sbjct: 166 KGSVAGFNG 174
>gi|291533622|emb|CBL06735.1| hypothetical protein MHY_20500 [Megamonas hypermegale ART12/1]
Length = 60
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKN 60
M ++ +KLGMT ++ EG+ +PVTV+ V+ +T++ +GY AVQ+G G K K
Sbjct: 1 MAKVILGKKLGMTQIFTEEGKVVPVTVVESGKNVVLQSKTVETDGYNAVQIGFGTVKEKM 60
>gi|307595041|ref|YP_003901358.1| 50S ribosomal protein L3 [Vulcanisaeta distributa DSM 14429]
gi|307550242|gb|ADN50307.1| ribosomal protein L3 [Vulcanisaeta distributa DSM 14429]
Length = 342
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 52/284 (18%), Positives = 91/284 (32%), Gaps = 74/284 (26%)
Query: 4 GVVARKLGMTC--VYNIE------GRRI--PVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53
G A K GM V + G+ + PVT+L +V+ R + + +++
Sbjct: 43 GFAAYKAGMAHAVVIDDRPTSPFYGKEVVKPVTILDAPPIKVIAFRAYTYDPWKNLKLSL 102
Query: 54 GEAKVKNVSKPM-------RGFFSSVNVSPKKKLFEFRVQK------------------- 87
GE + +V K + F+ + K + +
Sbjct: 103 GEVWMPDVPKDILRKIPVLPEKFNKEEMMKKILDNVDVITEVRAIVATQPRLSGIGKKTP 162
Query: 88 ------------------DDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNF 129
D + + F+ GQ VDV +T GKG+ G +KR N
Sbjct: 163 EILEIPIGGVDDMNQIIKFADSILGKDININDVFSEGQYVDVAAITKGKGWQGVVKRFNV 222
Query: 130 GGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------- 182
L H +R G+ G + G+MG ++ T N ++ +
Sbjct: 223 KILPKWHKHRKGYRRIGAIGPQNPALT--FTTPRPGQMGLHKRTEYNKRILRIGMNGAEV 280
Query: 183 ----------DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
K I+++G VPG K + +R +
Sbjct: 281 TPSSGFPHYGIIKGPYIVLEGTVPGVVKR-LVTLRFPVRPRPPT 323
>gi|159463060|ref|XP_001689760.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283748|gb|EDP09498.1| predicted protein [Chlamydomonas reinhardtii]
Length = 264
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/157 (25%), Positives = 60/157 (38%), Gaps = 21/157 (13%)
Query: 54 GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTG 113
G + S G F S P+ ++ + L + Y + +
Sbjct: 54 GWRASFSPSPIELGCFPSSPRRPEAWYDLGVLEMYEYLGIGSGLSITDYVGHIKHRSLHS 113
Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
+G +G +KR + THG S SHR HGS G P RV+ KMAG+
Sbjct: 114 ----RGPAGTIKRWHHKRGAMTHG-SKSHREHGSIGSATTPSRVYPGLKMAGQ------- 161
Query: 174 VKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSF 210
VD +R ++VKG VPG N + + +
Sbjct: 162 --------VDTERRALVVKGSVPGKVGN-VVEIVPAK 189
>gi|169929949|gb|ACB05650.1| 50S ribosomal protein L3 [Leptospira alexanderi serovar Mengla]
gi|169929952|gb|ACB05652.1| 50S ribosomal protein L3 [Leptospira alexanderi serovar Manzhuang]
Length = 93
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
+ G+GF G +KRH G S HR GS G P RVFK K+ GR G + TV
Sbjct: 1 SKGRGFQGVVKRHGHAGGPGG-HGSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSLQTTV 59
Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKNSWILV 206
+NL+VV +++++ L+ V G VPG N+ I +
Sbjct: 60 RNLKVVRINEEKNLVFVSGSVPGTA-NTVITI 90
>gi|255513436|gb|EET89702.1| ribosomal protein L3 [Candidatus Micrarchaeum acidiphilum ARMAN-2]
Length = 322
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 52/283 (18%), Positives = 86/283 (30%), Gaps = 72/283 (25%)
Query: 5 VVARKLGMTCVYNIEGRRIP---------VTVLHLDNCQVVVHRTLDKNG---------- 45
+VA K GMT + I+ P T+L + + R +
Sbjct: 36 IVAFKAGMTSLSYIDDSESPSKGMEVLRGCTILEVPKTEAYGIRLYSVDPTTKYLKCTAE 95
Query: 46 -YMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKK-------------------------- 78
Y K + F K+
Sbjct: 96 IYNKAIANKIGIKEIKTDESKISKFKERLSDFKRIGVLLVAHADTISAEQNHPTKYESTV 155
Query: 79 -KLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHG 137
+ L V F G+ +DV +T GKG++G +KRH L H
Sbjct: 156 TGGNAEQRFDFAAQLVGKEVKPADVFKGGEFIDVVSVTKGKGWAGVIKRHGVRRLD--HK 213
Query: 138 VSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV----SVDDKR------- 186
+ R G+ G PG++ G++G N T N ++ + D ++
Sbjct: 214 ATQKIRHIGALGAF-TPGKIMYTVPRPGQLGFNYRTEHNKRILVLGAASDTEKVNIKSGI 272
Query: 187 --------GLILVKGCVPGAKKNSWILVRDSF--KSAVNCKGK 219
IL++G VPG K + ++ S ++A K
Sbjct: 273 KNYGLVKSDYILIEGSVPGPAKR-IVRLKKSVNNRNAAGIKEP 314
>gi|171185278|ref|YP_001794197.1| 50S ribosomal protein L3P [Thermoproteus neutrophilus V24Sta]
gi|212288414|sp|B1YD88|RL3_THENV RecName: Full=50S ribosomal protein L3P
gi|170934490|gb|ACB39751.1| ribosomal protein L3 [Thermoproteus neutrophilus V24Sta]
Length = 338
Score = 79.3 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 57/273 (20%), Positives = 83/273 (30%), Gaps = 74/273 (27%)
Query: 4 GVVARKLGMTC-VYNIE-------GRRI--PVTVLHLDNCQVVVHRTLDKNG-------- 45
G A K GM V + G+ + PVTVL + R +
Sbjct: 43 GFAAYKAGMLHAVVVEDRPTSPLYGKEVVRPVTVLDAPPLFIWGFRLYTLDPTNGYRRSI 102
Query: 46 ----------YMAVQVGAGEAKVKNVSKPMRGFFS--------------------SVNVS 75
Y+ + E + F
Sbjct: 103 AEVWAPELPAYIRRVLTLPEKADVDKQMKKVEEFKDVAVDVRALVATQPHLSGIGKKTPE 162
Query: 76 PKKKLFEFRVQKDDDLLPVGSVFSP-----SYFTVGQLVDVTGMTIGKGFSGAMKRHNFG 130
+ D+ + S+ FT GQLVDV +T GKG+ G +KR
Sbjct: 163 LLEIPIGGVPSVDERIKFAVSLLGKTVSPKEVFTAGQLVDVIAVTKGKGYQGVIKRFGVT 222
Query: 131 GLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRG--- 187
L H HR G+ G + + + G+MG ++ T N VV + G
Sbjct: 223 ILPRWHKHRKGHRRTGTIGPQAPA--LMFTQPRPGQMGFHQRTEYNKRVVKI-GDNGAEI 279
Query: 188 ---------------LILVKGCVPGAKKNSWIL 205
IL++G VPGAKK +L
Sbjct: 280 TPKSGFLHYGVIRGPYILIQGTVPGAKKRLVVL 312
>gi|169929937|gb|ACB05642.1| 50S ribosomal protein L3 [Leptospira weilii serovar Sarmin]
gi|169929940|gb|ACB05644.1| 50S ribosomal protein L3 [Leptospira weilii serovar Celledoni]
Length = 93
Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
+ G+GF G +KRH G S HR GS G P RVFK K+ GR G + TV
Sbjct: 1 SKGRGFQGVVKRHGHAGGPGG-HGSRFHRHPGSMGANSTPSRVFKGVKLPGRTGSLQTTV 59
Query: 175 KNLEVVSVDDKRGLILVKGCVPGAKKNSWILV 206
+NL+VV +++++ L+ V G VPG N+ I +
Sbjct: 60 RNLKVVRINEEKNLVFVSGAVPGTA-NTVITI 90
>gi|296424388|ref|XP_002841730.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637978|emb|CAZ85921.1| unnamed protein product [Tuber melanosporum]
Length = 640
Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 49/302 (16%), Positives = 76/302 (25%), Gaps = 99/302 (32%)
Query: 3 SGVVARKLGMTCV---YNIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ VTV+ +V
Sbjct: 294 TAALGYKAGMTTIVRDLDRPGAKMHKKEVVEAVTVIETPPMVIVGVVGYVETPRGLRSLT 353
Query: 39 ------------RTLDKNGYMAVQVGA------------------GEAKVKNVSKPMRGF 68
R KN Y + + G K +
Sbjct: 354 TVWAEHLSDDLKRRFYKNWYKSKKKAFTKYAKRHAGEGKAISHELGRIKKYCTVVRVLAH 413
Query: 69 FSSVNVSPKKKLF-----------EFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
K+K V S F +++DV +T G
Sbjct: 414 SQIRKTPLKQKKTHLMEIQVNGGSITDKVDFAFSHFEKEVTISSIFEQDEMIDVIAVTKG 473
Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
GF+G R L R G P V AG+ G + T N
Sbjct: 474 HGFNGVTSRWGTKKLP--RKTHKGLRKVACIG-AWHPSHVQWTVARAGQDGYHHRTSVNH 530
Query: 178 EVVSV------------------------------DDKRGLILVKGCVPGAKKNSWILVR 207
++ + + K ++VKG VPG KK + +R
Sbjct: 531 KIYRIGSGTDEGNASTEFDITKKTITPLGGFPRYGEIKNDFVMVKGSVPGVKKR-VMTLR 589
Query: 208 DS 209
S
Sbjct: 590 KS 591
>gi|289579898|ref|YP_003478364.1| ribosomal protein L3 [Natrialba magadii ATCC 43099]
gi|289529451|gb|ADD03802.1| ribosomal protein L3 [Natrialba magadii ATCC 43099]
Length = 340
Score = 78.5 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 51/138 (36%), Gaps = 18/138 (13%)
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
G F G+ VD +G+T GKG G +KR + H R G+ G
Sbjct: 185 EEDGGEHVMNDVFRAGEYVDASGVTKGKGTQGPVKRWGVQKRKGKHARQGWRRRIGNLGP 244
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV----------------DDKRGLILVKGC 194
+P RV G+ G ++ T N +V + + +L+KG
Sbjct: 245 -WNPSRVRSTVPQQGQTGYHQRTELNKRLVDIGDGADATVDGGFVNYGEVDGPHVLIKGS 303
Query: 195 VPGAKKNSWILVRDSFKS 212
+PG K + R + +
Sbjct: 304 LPGPNKR-LVRFRPAIRP 320
>gi|302348734|ref|YP_003816372.1| 50S ribosomal protein L3P [Acidilobus saccharovorans 345-15]
gi|302329146|gb|ADL19341.1| 50S ribosomal protein L3P [Acidilobus saccharovorans 345-15]
Length = 329
Score = 78.5 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 45/278 (16%), Positives = 80/278 (28%), Gaps = 83/278 (29%)
Query: 4 GVVARKLGMTCVYNIE--------GRRI--PVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53
G + K GMT + ++ G+ + P+TVL V+ R GY +
Sbjct: 28 GFIGYKAGMTHAFIVDNRQGSPTFGKEVFRPITVLEAPPIFVLAVRGY---GYDENRGLY 84
Query: 54 GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP------------- 100
P+ + + ++K + L
Sbjct: 85 -TVGEAWARPPLDLELERRISAIGAFDTQSMLKKLEASLSDIKEVRVLVATQPKLTGGLS 143
Query: 101 ------------------------------------SYFTVGQLVDVTGMTIGKGFSGAM 124
F G +VDV +T GKGF G +
Sbjct: 144 KKSPDLLEVKVASPGSDVKAAFDYATSILGKTLSVGEVFQPGLMVDVIAVTKGKGFQGDV 203
Query: 125 KRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-- 182
KR L H R G+ + + G++G +R T N ++ +
Sbjct: 204 KRFGVKVLPRWHKHRKKARGIGARSHGKGT---WWEIPNPGQLGFHRRTEYNKRILDITD 260
Query: 183 ---------------DDKRGLILVKGCVPGAKKNSWIL 205
+ L++++G +PGA K ++
Sbjct: 261 DWAAYTPAGGFLHYGIPRSTLVVLEGTIPGAVKRPIVM 298
>gi|145592242|ref|YP_001154244.1| 50S ribosomal protein L3P [Pyrobaculum arsenaticum DSM 13514]
gi|212288408|sp|A4WMH5|RL3_PYRAR RecName: Full=50S ribosomal protein L3P
gi|145284010|gb|ABP51592.1| LSU ribosomal protein L3P [Pyrobaculum arsenaticum DSM 13514]
Length = 338
Score = 78.5 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 21/123 (17%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
F+ GQLVDV +T GKG+ G +KR L H HR G+ G + +
Sbjct: 193 DVFSPGQLVDVIAVTKGKGWQGVVKRFGVTILPRWHKHRKGHRRTGTIGPQAPA--LMFT 250
Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKRG------------------LILVKGCVPGAKKNS 202
+ G+MG ++ T N ++ + + G IL++G +PGA+K
Sbjct: 251 QPRPGQMGFHQRTEYNKRLLKI-GENGAEITPKSGFPHYGVIKGPYILIQGSLPGARKRL 309
Query: 203 WIL 205
+L
Sbjct: 310 VVL 312
>gi|260891595|ref|ZP_05902858.1| hypothetical protein GCWU000323_02810 [Leptotrichia hofstadii
F0254]
gi|260858703|gb|EEX73203.1| ribosomal protein L3 [Leptotrichia hofstadii F0254]
Length = 61
Score = 77.7 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
++ +K+GMT ++ + + IPVTV+ + +T +K GY A+ + G+ K K
Sbjct: 2 ILGKKIGMTQIF-EDEKLIPVTVIEAGTNFITQIKTEEKEGYNAITLAYGDKKEK 55
>gi|315425680|dbj|BAJ47337.1| large subunit ribosomal protein L3 [Candidatus Caldiarchaeum
subterraneum]
gi|315427562|dbj|BAJ49161.1| large subunit ribosomal protein L3 [Candidatus Caldiarchaeum
subterraneum]
Length = 320
Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 47/268 (17%), Positives = 81/268 (30%), Gaps = 65/268 (24%)
Query: 4 GVVARKLGMT--CVYNIE------GRRIP--VTVLHLDNCQVVVHR-TLDKNG------- 45
G + K+GMT + G + TV+ +V+ + +G
Sbjct: 40 GFIGYKVGMTMVHYIDNTPNSPTQGSEVAKACTVVAAPPLKVIGISLYRNVDGELVNIGK 99
Query: 46 YMAVQVGAGEAKV-----KNVSKPMRGFF----------------------SSVNVSPKK 78
Y + +V + S G + K
Sbjct: 100 YWSKEVPEDVKRRNPTFRPMPSAEEIGQLEDDVDEVRIVVATQPRLVGAGKAPRIAEIKI 159
Query: 79 KLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGV 138
+ L + F GQ VDV +T GKGF G +KR+ L+
Sbjct: 160 GGKPAEALEKAKQLVGKDLRVTDVFKEGQFVDVIAVTKGKGFQGVVKRYGVSILQ--RKS 217
Query: 139 SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV--DD------------ 184
+ R + G +P V +G+MG +R T N ++ + D
Sbjct: 218 RKTRRGVAAIGP-WNPHYVMYTVPRSGQMGYHRRTEFNKRILRIGDDPASINPKSGWHRF 276
Query: 185 ---KRGLILVKGCVPGAKKNSWILVRDS 209
K ++++G V G +L +
Sbjct: 277 GLVKSDYLVLEGSVAGTPLRPLVLRAPA 304
>gi|260222805|emb|CBA32730.1| hypothetical protein Csp_D33610 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 65
Score = 77.3 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
PGRVF K+M G +G VT +NL+V+ VD+ R L+L+KG +PG+ K ++ VR + K+
Sbjct: 1 PGRVFPGKRMTGHLGDATVTTQNLDVIRVDEARQLLLIKGAIPGS-KGGFVTVRPAVKAK 59
Query: 214 VNCKGK 219
+
Sbjct: 60 ASKGAN 65
>gi|255098787|gb|ACU00734.1| 60S ribosomal protein L3 [Nosema bombycis]
gi|326573816|gb|ADZ95674.1| 60S ribosomal protein L3 [Nosema bombycis]
Length = 384
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 49/307 (15%), Positives = 79/307 (25%), Gaps = 93/307 (30%)
Query: 3 SGVVARKLGMTCVY------NIEGRRI-----PVTVLHLDNCQVVVHRTLDKNGYMAVQV 51
+ + K GMT V + VT++ + + G ++
Sbjct: 44 TAFIGYKAGMTHVVRSKIIQTKNKQLSKEIMDAVTLIETPPMVIYGVTGYEVTGKGLNRI 103
Query: 52 G---------------AGEAKVK---------------------------------NVSK 63
G+ + +K
Sbjct: 104 ATVLAPHIDESVRRREFGKRWEQLSANIKEYNKEKAEKDLEEIRKRASVIRILAHTQPTK 163
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
++S + +K D V F V + +D G+T GKGF
Sbjct: 164 IPALHLKKSHISEIQVNGGTINEKVDWALDKFEKEVTIDEVFEVNENLDTIGVTKGKGFQ 223
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR R G P RV AG+MG +R T N +V
Sbjct: 224 GVVKRFGVTIQP--RKSRKGIRKVACIG-AWHPSRVMTTVARAGQMGFHRRTETNKKVYM 280
Query: 182 V----------------------------DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+ K I+VKG V G +K + +R S
Sbjct: 281 IGNGNELIKTEFDLTEKPITPLGGIPHYGSIKNDYIMVKGAVIGPRKR-VVTLRKSLYKT 339
Query: 214 VNCKGKV 220
++
Sbjct: 340 KKASEEL 346
>gi|116755016|ref|YP_844134.1| 50S ribosomal protein L3P [Methanosaeta thermophila PT]
gi|121693633|sp|A0B9X0|RL3_METTP RecName: Full=50S ribosomal protein L3P
gi|116666467|gb|ABK15494.1| LSU ribosomal protein L3P [Methanosaeta thermophila PT]
Length = 335
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 59/151 (39%), Gaps = 19/151 (12%)
Query: 87 KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHG 146
K + L V + F VG+ +DV+ +T GKG G +KR + H + R G
Sbjct: 173 KAAEGLLGSQVAVSNIFNVGEWIDVSAVTKGKGTQGPVKRWGIMLQKRKHSRTGKLRHVG 232
Query: 147 STGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-----------------DDKRGLI 189
+ G P R+ G+ G ++ T N ++++ + +
Sbjct: 233 NLGP-WHPARISWRVPQLGQTGYHQRTEFNKRIMAIGTNGTDITPDGGFVGYGVVRNEYM 291
Query: 190 LVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
L+KG VPG K + +R + + K
Sbjct: 292 LIKGSVPGPVKR-LVRMRRAIRPGAAFAPKA 321
>gi|198477055|ref|XP_002136783.1| GA27952 [Drosophila pseudoobscura pseudoobscura]
gi|198145102|gb|EDY71806.1| GA27952 [Drosophila pseudoobscura pseudoobscura]
Length = 229
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 14/127 (11%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVH-------------RTLDKNGYMA 48
R GV+ARK+G ++ G+++ T+L + + V+ + R + N Y
Sbjct: 104 RCGVIARKIGQYPLWLKNGKKVRTTLLQIADNHVIKYMPHEECRPQKNLSRVHNSNQYGC 163
Query: 49 VQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQL 108
+ VGA ++K G F V PKK + F V D L G+ + S F VG+
Sbjct: 164 LLVGAESTNPSMLTKEYCGIFRDAGVVPKKNIMRFMVSPDGA-LAPGTPLNISRFRVGEY 222
Query: 109 VDVTGMT 115
VDV G T
Sbjct: 223 VDVRGKT 229
>gi|193083866|gb|ACF09547.1| ribosomal protein L3 [uncultured marine group II euryarchaeote
KM3-85-F5]
Length = 350
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/133 (25%), Positives = 56/133 (42%), Gaps = 22/133 (16%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
+ GQ VDV G+T GKG+ G++KR L TH S R G+ G V K
Sbjct: 205 DVYQAGQEVDVVGVTKGKGWQGSIKRFGLKLL--THKNSKRRRQGGNMGDFGTGY-VRKT 261
Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------DDKRGLILVKGCVPGAKKNS 202
+ AG++G ++ T N ++ + + + ++V+G +PG K
Sbjct: 262 IRQAGQVGYHKRTELNKRILRISNPDESEITPAGGFLNYGEVRNPYMIVQGSLPGPAKR- 320
Query: 203 WILVRDSFKSAVN 215
+ RD +
Sbjct: 321 LLRFRDPIRPRKK 333
>gi|47079404|gb|AAT10147.1| ribosomal protein L3 [uncultured marine group II euryarchaeote
DeepAnt-JyKC7]
Length = 358
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 55/133 (41%), Gaps = 22/133 (16%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
+ G+ +DV G+T GKG+ G +KR L +H S R G+ G V K
Sbjct: 213 DVYEAGKELDVVGITKGKGWQGVIKRFGVKLL--SHKNSKRRRQIGNMGDFGTGY-VRKT 269
Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------DDKRGLILVKGCVPGAKKNS 202
+ AG+MG ++ T N ++ + + ++++G +PG K
Sbjct: 270 IRQAGQMGYHKRTELNKRILRISNPGESDVTPAGGFLHYGEVTNPYMVLEGSLPGPAKR- 328
Query: 203 WILVRDSFKSAVN 215
+ RD + N
Sbjct: 329 LLRFRDPVRPHTN 341
Score = 42.7 bits (99), Expect = 0.033, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 21/59 (35%), Gaps = 10/59 (16%)
Query: 4 GVVARKLGMTCVYNIE--------GRRI--PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
G K GMT V + G+ I VTV+ + +V+ R Y G
Sbjct: 42 GFAGWKAGMTHVLMRDTNPHSTSAGQEIRKAVTVVEVPPMKVLAVRGYHMTPYGMQTAG 100
>gi|242398279|ref|YP_002993703.1| 50S ribosomal protein L3P [Thermococcus sibiricus MM 739]
gi|259709744|sp|C6A159|RL3_THESM RecName: Full=50S ribosomal protein L3P
gi|242264672|gb|ACS89354.1| 50S ribosomal protein L3P [Thermococcus sibiricus MM 739]
Length = 359
Score = 76.2 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 50/141 (35%), Gaps = 29/141 (20%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
G+L+D+ +T GKG G +KR +H S R + G P RV
Sbjct: 206 EILQEGELLDIVAVTKGKGTQGPVKRWGVKL--TSHKDSKGRRKVATIGP-WHPARVMWT 262
Query: 161 KKMAGRMGGNRVTVKNLEVVSV-------------------------DDKRGLILVKGCV 195
AG+MG + T N ++ + K I++ G +
Sbjct: 263 VPRAGQMGFHHRTEFNKRLLRIGENGKLTLNGEKIEITPNGGFPHYGVVKNDFIMIAGTI 322
Query: 196 PGAKKNSWILVRDSFKSAVNC 216
PGA K I +R + +
Sbjct: 323 PGAIKR-IIRMRPAVRPPAKR 342
>gi|193083756|gb|ACF09443.1| ribosomal protein L3 [uncultured marine group II euryarchaeote
SAT1000-15-B12]
Length = 358
Score = 76.2 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 61/138 (44%), Gaps = 23/138 (16%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
+ GQ +DV G+T GKG+ G++KR L +H S R G+ G V K
Sbjct: 213 DVYQTGQEIDVVGITKGKGWQGSIKRWGIKLL--SHKNSKRRRQGGNMGDFGTGY-VRKT 269
Query: 161 KKMAGRMGGNRVTVKNLEVVSV-DDKRG-----------------LILVKGCVPGAKKNS 202
+ AG++G ++ T N ++ + + + ++++G +PG K
Sbjct: 270 IRQAGQVGYHQRTELNKRILRISNPEESDITPAGGFLNYGEVTNPYMIIQGSLPGPAKR- 328
Query: 203 WILVRDSFKSAVNCKGKV 220
+ R++ + + K +V
Sbjct: 329 MLRFREAIR-SRPTKPEV 345
Score = 39.2 bits (90), Expect = 0.36, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 18/67 (26%), Gaps = 15/67 (22%)
Query: 4 GVVARKLGMTCVYNIEGRRI----------PVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53
G K GMT V + VTV+ V+ R GY G
Sbjct: 42 GFAGWKAGMTHVLVRDNNPHSPSARQEVRKAVTVVEAPPMCVLAIR-----GYRMTSYGM 96
Query: 54 GEAKVKN 60
A
Sbjct: 97 QTAGEAW 103
>gi|269986342|gb|EEZ92643.1| ribosomal protein L3 [Candidatus Parvarchaeum acidiphilum ARMAN-4]
Length = 301
Score = 75.8 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 55/269 (20%), Positives = 84/269 (31%), Gaps = 59/269 (21%)
Query: 4 GVVARKLGMTCV-YNIEGRRIP---------VTVLHLDNCQVVVHRTLDK---------- 43
G K+GM + Y + P TVL V R +K
Sbjct: 29 GFAGYKVGMIQLSYIDSDKNSPTFKMEVITNATVLESPPLFVCALRFYNKGSSIGESWGS 88
Query: 44 --NGYMAVQVGAGEAKVK-------------NVSKPMRGFFSSVNVSPKKKLFEFRVQKD 88
N ++A QV E VS + ++
Sbjct: 89 GINKFVARQVKFKENNKSVDDFKGKFDDIRLIVSTQPWKIDLKKKPEVFELCIGGNLEDK 148
Query: 89 ---DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSH 145
L + + S G VDV +T GKGF+G++KR+ S S R
Sbjct: 149 LTLGKELLSKEIEASSVIKDGNFVDVASVTKGKGFTGSVKRYGVKIYPV--HASKSRRKA 206
Query: 146 GSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-----------------DDKRGL 188
G+ G + +V GR+G N N V V + K
Sbjct: 207 GNLG-AESMAKVQFTVPQHGRLGFNSRVEYNKFVFRVIKDADEVNIPSGYKRYGNVKGSA 265
Query: 189 ILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
I++KG VPG+ I++R + + +
Sbjct: 266 IILKGSVPGSASR-LIMLRKAIRPTKKAE 293
>gi|159040903|ref|YP_001540155.1| 50S ribosomal protein L3P [Caldivirga maquilingensis IC-167]
gi|212288253|sp|A8MB75|RL3_CALMQ RecName: Full=50S ribosomal protein L3P
gi|157919738|gb|ABW01165.1| ribosomal protein L3 [Caldivirga maquilingensis IC-167]
Length = 347
Score = 75.8 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 61/286 (21%), Positives = 87/286 (30%), Gaps = 78/286 (27%)
Query: 4 GVVARKLGMTCVYNIEGRRI----------PVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53
G V K GM V ++ R+ VTV+ VV R N A V
Sbjct: 43 GFVGYKAGMVHVTVVDDRKTSPFFGKELVKAVTVVETPPLYVVGLRAYAINPLKAELVSV 102
Query: 54 GEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP------------- 100
GEA V ++ + + P+K + + LL S
Sbjct: 103 GEAWVNIPNEVRKYIARRIPTLPEKFDTDKALADLQGLLDSVSYIKVIAMTQPYKAGVGK 162
Query: 101 ----------------------------------SYFTVGQLVDVTGMTIGKGFSGAMKR 126
F GQLVDV G+T GKG G +KR
Sbjct: 163 KTPEVLEIPVGGVPTIDEQFKYASGLLGKEVKPTDVFKPGQLVDVIGVTKGKGTQGVIKR 222
Query: 127 HNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV---- 182
L H R G+ G + V + G+MG +R T N ++ +
Sbjct: 223 FGVKELPRWHKHRKGSRRTGTVGPKPA---VMYTQPRMGQMGFHRRTEYNKRILKISDNG 279
Query: 183 -------------DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
+ G +L++G PG K I R + N
Sbjct: 280 SEITPKGGFKHYGIVRSGYMLIEGSTPGVVKR-LIAFRYPIRPPFN 324
>gi|303388761|ref|XP_003072614.1| 60S ribosomal protein L3 [Encephalitozoon intestinalis ATCC 50506]
gi|303301755|gb|ADM11254.1| 60S ribosomal protein L3 [Encephalitozoon intestinalis ATCC 50506]
Length = 383
Score = 75.4 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 57/307 (18%), Positives = 85/307 (27%), Gaps = 93/307 (30%)
Query: 3 SGVVARKLGMTCVYNIEGRRI-----------PVTVLHLDNCQVVVHRTLDK-------- 43
+G + K GMT V + + VTV+ V ++
Sbjct: 44 TGFMGYKAGMTHVIRTKTQVAKNKQLSREVMDAVTVVEAPPMVVYGIVGYERTVTGLHRL 103
Query: 44 ------------------NGYM----AVQVGAGEAKVKNVSKPMR--------------- 66
N YM A Q GE V + +
Sbjct: 104 PIVTASYVNDGVLRRMFGNKYMEKEAAAQFCRGEVTESRVEEIKKRAECVRVLVQTQPEM 163
Query: 67 ----GFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVF-SPSYFTVGQLVDVTGMTIGKGFS 121
G + + + + L + F + +DV G+T GKGF
Sbjct: 164 VKTLGLKKAHIAEIQLNGGSICEKVEWALERLEKEIQIAEVFGENENIDVIGVTKGKGFQ 223
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR R G P RV + AG+MG +R T KN V
Sbjct: 224 GTVKRFGVRKQP--RKSRKGIRKVACIG-AWHPSRVMYSVARAGQMGFHRRTEKNKRVYM 280
Query: 182 V----------------------------DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+ + K I+VKG V G +K + +R S
Sbjct: 281 IGNGSTKIKTEFDLTEKAISPMGGFPHYGEVKNDFIMVKGAVVGPRKR-VVTLRKSLTQQ 339
Query: 214 VNCKGKV 220
+ V
Sbjct: 340 RPSEELV 346
>gi|293372119|ref|ZP_06618510.1| 50S ribosomal protein L3 domain protein [Bacteroides ovatus SD
CMC 3f]
gi|292632911|gb|EFF51498.1| 50S ribosomal protein L3 domain protein [Bacteroides ovatus SD
CMC 3f]
Length = 53
Score = 75.4 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 12 MTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVK 59
MT V++ +G+ +P TV+ C V +T++K+GY AVQ+G + K
Sbjct: 1 MTSVFSADGKNVPCTVIEAGPCVVTQVKTVEKDGYAAVQLGFQDKKEN 48
>gi|73973632|ref|XP_868298.1| PREDICTED: similar to 60S ribosomal protein L3 (L4) isoform 6
[Canis familiaris]
Length = 358
Score = 75.4 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 33/202 (16%), Positives = 61/202 (30%), Gaps = 25/202 (12%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVHR--TLDKNGYMAVQ 50
+ + K GMT + + G ++ VT++ VV G +
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFK 103
Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGS----------VFSP 100
E + + K + D +
Sbjct: 104 TIFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDDDGKKQLEKDFNSMKKYCQVIRVI 163
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
++ + +++DV G+T GKG+ G R + L R G P RV +
Sbjct: 164 AHTQMHEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAFS 220
Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
AG+ G + T N ++ +
Sbjct: 221 MARAGQKGYHHRTEINKKIYKI 242
>gi|313111417|ref|ZP_07797222.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa 39016]
gi|310883724|gb|EFQ42318.1| 50S ribosomal protein L3 [Pseudomonas aeruginosa 39016]
Length = 57
Score = 75.4 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 29/56 (51%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 157 VFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
+FK KKM+G +G RVTV++LE+V VD +R L+LVKG VPGA ++VR + K+
Sbjct: 1 MFKGKKMSGHLGAERVTVQSLEIVRVDAERNLLLVKGAVPGA-TGGDVIVRPAAKA 55
>gi|303390711|ref|XP_003073586.1| 60S ribosomal protein L3 [Encephalitozoon intestinalis ATCC 50506]
gi|303302733|gb|ADM12226.1| 60S ribosomal protein L3 [Encephalitozoon intestinalis ATCC 50506]
Length = 383
Score = 75.0 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 57/307 (18%), Positives = 85/307 (27%), Gaps = 93/307 (30%)
Query: 3 SGVVARKLGMTCVYNIEGRRI-----------PVTVLHLDNCQVVVHRTLDK-------- 43
+G + K GMT V + + VTV+ V ++
Sbjct: 44 TGFMGYKAGMTHVIRTKTQVAKNKQLSREVMDAVTVVEAPPMVVYGIVGYERTVTGLHRL 103
Query: 44 ------------------NGYM----AVQVGAGEAKVKNVSKPMR--------------- 66
N YM A Q GE V + +
Sbjct: 104 PIVTVSYVNDGVLRRMFGNKYMEKEAAAQFCRGEVTESRVEEIKKRAECVRVLVQTQPEM 163
Query: 67 ----GFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVF-SPSYFTVGQLVDVTGMTIGKGFS 121
G + + + + L + F + +DV G+T GKGF
Sbjct: 164 VKTLGLKKAHIAEIQLNGGSICEKVEWALERLEKEIQIAEVFGENENIDVIGVTKGKGFQ 223
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR R G P RV + AG+MG +R T KN V
Sbjct: 224 GTVKRFGVRKQP--RKSRKGIRKVACIG-AWHPSRVMYSVARAGQMGFHRRTEKNKRVYM 280
Query: 182 V----------------------------DDKRGLILVKGCVPGAKKNSWILVRDSFKSA 213
+ + K I+VKG V G +K + +R S
Sbjct: 281 IGNGSTKIKTEFDLTEKAISPMGGFPHYGEVKNDFIMVKGAVVGPRKR-VVTLRKSLTQQ 339
Query: 214 VNCKGKV 220
+ V
Sbjct: 340 RPSEELV 346
>gi|332158024|ref|YP_004423303.1| 50S ribosomal protein L3P [Pyrococcus sp. NA2]
gi|331033487|gb|AEC51299.1| 50S ribosomal protein L3P [Pyrococcus sp. NA2]
Length = 362
Score = 75.0 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 36/141 (25%), Positives = 52/141 (36%), Gaps = 31/141 (21%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
G+L+DV +T GKG G +KR H S R GS G P RV
Sbjct: 209 EVLKEGELLDVIAVTKGKGTQGPVKRWGIKLRA--HKDSKGRRKVGSIGP-WHPARVMWT 265
Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKRG--------------------------LILVKGC 194
MAG+MG + T N ++++ + G +++ G
Sbjct: 266 VPMAGQMGFHHRTELNKRLIAI-GENGKLVIDGNEIEITPKGGFPHYGIVRSDFMMIAGS 324
Query: 195 VPGAKKNSWILVRDSFKSAVN 215
VPG K I VR + +
Sbjct: 325 VPGPVKR-IIRVRPAIRPPKK 344
Score = 38.8 bits (89), Expect = 0.56, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 22/54 (40%), Gaps = 10/54 (18%)
Query: 2 RSGVVARKLGMTCVYNIE-------GRRI--PVTVLHLDNCQVVVHRTLDKNGY 46
G K GMT + I+ G+ I PVT++ ++ R + GY
Sbjct: 38 MLGFAGYKAGMTHILMIDDEPGLTNGKEIFMPVTIIETPPLRIFGVRAY-RQGY 90
>gi|193084317|gb|ACF09976.1| ribosomal protein L3 [uncultured marine group II euryarchaeote
KM3-130-D10]
Length = 358
Score = 75.0 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 61/138 (44%), Gaps = 23/138 (16%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
+ GQ +DV G+T GKG+ G++KR L +H S R G+ G V K
Sbjct: 213 DVYQTGQEIDVVGVTKGKGWQGSIKRWGIKLL--SHKNSKRRRQGGNMGDFGT-RYVRKT 269
Query: 161 KKMAGRMGGNRVTVKNLEVVSV-DDKRG-----------------LILVKGCVPGAKKNS 202
+ AG++G ++ T N ++ + + + ++++G +PG K
Sbjct: 270 IRQAGQVGYHQRTELNKRILRISNPEESDITPAGGFLNYGEVTNPYMIIQGSLPGPAKR- 328
Query: 203 WILVRDSFKSAVNCKGKV 220
+ R++ + + K +V
Sbjct: 329 MLRFREAIR-SRPTKPEV 345
>gi|76496472|ref|NP_001029025.1| 60S ribosomal protein L3 isoform b [Homo sapiens]
Length = 354
Score = 74.6 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 40/203 (19%), Positives = 67/203 (33%), Gaps = 31/203 (15%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
+ + K GMT + + G ++ VT++ VV GY+ G
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIV-----GYVETPRG 98
Query: 53 ---AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKD----------DDLLPVGSVFS 99
+++S + F KKK +Q + V
Sbjct: 99 LRTFKTVFAEHISDECKRRFYKNWHKSKKKAHLMEIQVNGGTVAEKLDWARERLEQQVPV 158
Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159
F +++DV G+T GKG+ G R + L R G P RV
Sbjct: 159 NQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAF 215
Query: 160 NKKMAGRMGGNRVTVKNLEVVSV 182
+ AG+ G + T N ++ +
Sbjct: 216 SVARAGQKGYHHRTEINKKIYKI 238
>gi|296236923|ref|XP_002763539.1| PREDICTED: 60S ribosomal protein L3-like isoform 2 [Callithrix
jacchus]
Length = 354
Score = 74.6 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 40/203 (19%), Positives = 67/203 (33%), Gaps = 31/203 (15%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
+ + K GMT + + G ++ VT++ VV GY+ G
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIV-----GYVETPRG 98
Query: 53 ---AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKD----------DDLLPVGSVFS 99
+++S + F KKK +Q + V
Sbjct: 99 LRTFKTVFAEHISDECKRRFYKNWHKSKKKAHLMEIQVNGGTVSEKLDWARERLEQQVPV 158
Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159
F +++DV G+T GKG+ G R + L R G P RV
Sbjct: 159 NQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAF 215
Query: 160 NKKMAGRMGGNRVTVKNLEVVSV 182
+ AG+ G + T N ++ +
Sbjct: 216 SVARAGQKGYHHRTEINKKIYKI 238
>gi|296237105|ref|XP_002763612.1| PREDICTED: 60S ribosomal protein L3-like isoform 2 [Callithrix
jacchus]
Length = 354
Score = 74.6 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 67/203 (33%), Gaps = 31/203 (15%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
+ + K GMT + + G ++ VT++ VV GY+ G
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIV-----GYVETPRG 98
Query: 53 ---AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPV----------GSVFS 99
+++S + F KKK +Q + + V
Sbjct: 99 LRTFKTVFAEHISDECKRRFYKNWHKSKKKAHLMEIQVNGGTVSEKLDWARKRLEQQVPV 158
Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159
F +++DV G++ KG+ G R + L R G P RV
Sbjct: 159 NQVFGQDEMIDVIGVSKRKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAF 215
Query: 160 NKKMAGRMGGNRVTVKNLEVVSV 182
+ AG+ G + T N ++ +
Sbjct: 216 SVARAGQKGYHHRTEINKKIYKI 238
>gi|170291100|ref|YP_001737916.1| 50S ribosomal protein L3P [Candidatus Korarchaeum cryptofilum OPF8]
gi|170175180|gb|ACB08233.1| ribosomal protein L3 [Candidatus Korarchaeum cryptofilum OPF8]
Length = 332
Score = 74.6 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 56/278 (20%), Positives = 90/278 (32%), Gaps = 75/278 (26%)
Query: 7 ARKLGMTCVYNIE--------GRRI--PVTVLHLDNCQVVVHRTLDKNGYM--------- 47
K+GM V E G++I TV+ ++V R K GY
Sbjct: 41 GYKVGMVHVLLKEDRPGKLNLGQQITLASTVIETPPIEIVGFRAY-KEGYYGLKPLTTAL 99
Query: 48 -------------------------AVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFE 82
+ GA ++++ +S P+
Sbjct: 100 RIEKKDPISRTLTIGEGVDNFNEALSKLEGAKVSEIRILSYTRPDLAGIHKKKPEFMEIP 159
Query: 83 FRVQKDDDLLPVGSVFS------PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATH 136
+ + ++ + S F VGQLVDVT +T G G+ G ++R LR H
Sbjct: 160 VKGGEMEERIEFAKSLVGSQLKVDSVFKVGQLVDVTAVTKGHGWQGVVRRFGIELLR--H 217
Query: 137 GVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV------SVDDK----- 185
GS G R P V AG+ G ++ T N ++ D
Sbjct: 218 KAGKGRWRVGSLGSRHPPY-VTWRVPRAGQTGYHKRTEYNKRILMMGDLTKGDLDLSPKG 276
Query: 186 --RG-------LILVKGCVPGAKKNSWILVRDSFKSAV 214
+ IL+ G VPG K ++ +R + +
Sbjct: 277 GFKNYGILRSQYILLSGSVPGPAKR-FVFIRHPIRPSY 313
>gi|73973630|ref|XP_868296.1| PREDICTED: similar to ribosomal protein L3 isoform 5 [Canis
familiaris]
Length = 354
Score = 74.6 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/203 (19%), Positives = 67/203 (33%), Gaps = 31/203 (15%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
+ + K GMT + + G ++ VT++ VV GY+ G
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIV-----GYVETPRG 98
Query: 53 ---AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKD----------DDLLPVGSVFS 99
+++S + F KKK +Q + V
Sbjct: 99 LRTFKTIFAEHISDECKRRFYKNWHKSKKKAHLMEIQVNGGTVAEKLDWARERLEQQVPV 158
Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159
F +++DV G+T GKG+ G R + L R G P RV
Sbjct: 159 NQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAF 215
Query: 160 NKKMAGRMGGNRVTVKNLEVVSV 182
+ AG+ G + T N ++ +
Sbjct: 216 SMARAGQKGYHHRTEINKKIYKI 238
>gi|207108256|ref|ZP_03242418.1| 50S ribosomal protein L3 [Helicobacter pylori HPKX_438_CA4C1]
Length = 128
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/76 (50%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G MKR NF G A HG S HR GS G R+ PGRV K +KMAG G VT +N EV+S
Sbjct: 44 GVMKRWNFQGGPAAHG-SRFHRRPGSIGNREWPGRVQKGRKMAGHYGNELVTCQN-EVLS 101
Query: 182 VDDKRGLILVKGCVPG 197
D + ++++KG V G
Sbjct: 102 FDKESMVLVLKGSVAG 117
>gi|302658162|ref|XP_003020788.1| hypothetical protein TRV_05095 [Trichophyton verrucosum HKI 0517]
gi|291184652|gb|EFE40170.1| hypothetical protein TRV_05095 [Trichophyton verrucosum HKI 0517]
Length = 565
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 47/307 (15%), Positives = 77/307 (25%), Gaps = 98/307 (31%)
Query: 6 VARKLGMTCVYNI---EGRRI-------PVTVLHLDNCQVVVH----------------- 38
+ K GMT + G ++ VT++ V
Sbjct: 68 MGYKAGMTTIVRDLERPGAKMHRKEIVEAVTIVETPPMIAVGIVGYIETPRGLRSLTTVW 127
Query: 39 ---------RTLDKNGYMAVQVGA-----------------GEAKVKNVSKPMRGFFSSV 72
R KN Y + + K +
Sbjct: 128 ADHLSDEVKRRFYKNWYKSKKKAFTRYAKTHADAATTTRELERIKNYCTVVRLLAHTQIR 187
Query: 73 NVSPKKKLFEFR-----------VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
K+K + L + S F ++VDV +T G GFS
Sbjct: 188 KTPLKQKKAHLMEIQVNGGSIADKVEFAHGLFEKPIDVDSVFEKDEVVDVIAVTKGHGFS 247
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G R L R G P V AG+ G + T N ++
Sbjct: 248 GVTSRWGTKKLP--RKTHKGLRKVACIG-AWHPSHVQWTVARAGQDGYHHRTSANHKIYR 304
Query: 182 V------------------------------DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+ + K +++KG +PG +K + +R +
Sbjct: 305 IGKADDEGNASTEFDVSKKRITPMGGFVRYGEVKNDYVMLKGSIPGVRKR-VVTLRKTLW 363
Query: 212 SAVNCKG 218
V+ K
Sbjct: 364 PQVSRKA 370
>gi|301500983|ref|YP_003795448.1| ribosomal protein L3 [Alveolata sp. CCMP3155]
gi|300069529|gb|ADJ66636.1| ribosomal protein L3 [Chromerida sp. RM11]
Length = 209
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMG 168
V + G+ G GF+G + R+ F T G S HR+ GS G P RV+ KKM GR
Sbjct: 111 VCIRGVGKGHGFAGVVSRYGFSRGPMTRG-SKHHRAPGSAGAGTFPSRVYPRKKMPGRWK 169
Query: 169 GNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRD 208
+R + + +D + L+ ++G VPG N I +
Sbjct: 170 TSRRKYNRVRPLKLDVRHSLLWLQGSVPGKTGN-IIQISP 208
>gi|18978197|ref|NP_579554.1| 50S ribosomal protein L3P [Pyrococcus furiosus DSM 3638]
gi|42559663|sp|Q8TZZ8|RL3_PYRFU RecName: Full=50S ribosomal protein L3P
gi|18894006|gb|AAL81949.1| LSU ribosomal protein L3P [Pyrococcus furiosus DSM 3638]
Length = 365
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/141 (25%), Positives = 53/141 (37%), Gaps = 30/141 (21%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
G+L+DV +T GKG G +KR H S R GS G P RV
Sbjct: 211 EVLKEGELLDVIAVTKGKGTQGPVKRWGIKLRA--HKDSKGRRKVGSIGP-WHPARVMWT 267
Query: 161 KKMAGRMGGNRVTVKNLEVVSV----------DDK----------------RGLILVKGC 194
MAG+MG + T N ++++ + + +++ G
Sbjct: 268 VPMAGQMGFHHRTELNKRLIAIGENGKLKLDENTEIEITPKGGFPHYGIVRSDFMMIAGS 327
Query: 195 VPGAKKNSWILVRDSFKSAVN 215
VPGA K I VR + +
Sbjct: 328 VPGAIKR-IIRVRPAIRPPKK 347
>gi|118389862|ref|XP_001027976.1| ribosomal protein L3 containing protein [Tetrahymena thermophila]
gi|3861468|emb|CAA10068.1| ribosomal protein L3 [Tetrahymena thermophila]
gi|89309746|gb|EAS07734.1| ribosomal protein L3 containing protein [Tetrahymena thermophila
SB210]
Length = 391
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 56/301 (18%), Positives = 85/301 (28%), Gaps = 97/301 (32%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ K GMT + + G R VTV+ +V
Sbjct: 44 TAFTGFKAGMTHILREVDRSGSRHNKKEVVEAVTVIECPPMTIVGVVGYIDTPRGLRALT 103
Query: 39 ----RTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVN--------------------- 73
+T+D N + K + + F
Sbjct: 104 TVWAKTIDNNTKKRFYKNWANSNKKAFTHHEKNFDQKAQDLLLKRIEKYCSVVRVIAHTN 163
Query: 74 ------VSPKKKLFEFRVQKD--------DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
K + E +V L V S F +++DV G+T GKG
Sbjct: 164 MSKLNLRQKKNHILEIQVNGGKVAEKVAFAKSLLEKEVKVDSIFAENEMLDVLGVTKGKG 223
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G +KR L+ +R G G P R+ AG++G + T N +V
Sbjct: 224 FAGVIKRFGVKHLQK--KTHRGYRKVGCIG-AWHPSRIRFTVPRAGQLGYHHRTETNKKV 280
Query: 180 VSV------------------------------DDKRGLILVKGCVPGAKKNSWILVRDS 209
V K I++KGC G KK + +R S
Sbjct: 281 YRVGKGDDASNASTAGDVTDKAITPLGGFPHYGVVKNDFIMIKGCCVGPKKR-VLTLRKS 339
Query: 210 F 210
Sbjct: 340 I 340
>gi|14520558|ref|NP_126033.1| 50S ribosomal protein L3P [Pyrococcus abyssi GE5]
gi|9910846|sp|Q9V1T5|RL3_PYRAB RecName: Full=50S ribosomal protein L3P
gi|5457774|emb|CAB49264.1| rpl3P LSU ribosomal protein L3P [Pyrococcus abyssi GE5]
Length = 361
Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 53/141 (37%), Gaps = 31/141 (21%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
G+L+DV +T GKG G +KR H S R GS G P RV
Sbjct: 208 EVLKEGELLDVIAVTKGKGTQGPVKRWGIKLRA--HKDSKGRRKVGSIGP-WHPARVMWT 264
Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKRG--------------------------LILVKGC 194
MAG+MG + T N ++++ + G +++ G
Sbjct: 265 VPMAGQMGFHHRTELNKRLIAI-GENGKLVIDGNEIEITPKGGFPHYGIVRSDFMMIAGS 323
Query: 195 VPGAKKNSWILVRDSFKSAVN 215
VPGA K I VR + +
Sbjct: 324 VPGAIKR-IIRVRPAIRPPKK 343
>gi|302502186|ref|XP_003013084.1| hypothetical protein ARB_00629 [Arthroderma benhamiae CBS 112371]
gi|291176646|gb|EFE32444.1| hypothetical protein ARB_00629 [Arthroderma benhamiae CBS 112371]
Length = 557
Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/307 (15%), Positives = 77/307 (25%), Gaps = 98/307 (31%)
Query: 6 VARKLGMTCVYNI---EGRRI-------PVTVLHLDNCQVVVH----------------- 38
+ K GMT + G ++ VT++ V
Sbjct: 68 MGYKAGMTTIVRDLERPGAKMHRKEIVEAVTIVETPPMIAVGIVGYIETPRGLRSLTTVW 127
Query: 39 ---------RTLDKNGYMAVQVGA-----------------GEAKVKNVSKPMRGFFSSV 72
R KN Y + + K +
Sbjct: 128 ADHLSDEVKRRFYKNWYKSKKKAFTRYAKTHADAASTTRELERIKNYCTVVRLLAHTQIR 187
Query: 73 NVSPKKKLFEFR-----------VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFS 121
K+K + L + S F ++VDV +T G GFS
Sbjct: 188 KTPLKQKKAHLMEIQVNGGSIADKVEFAHGLFEKPIDVDSVFEKDEVVDVIAVTKGHGFS 247
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G R L R G P V AG+ G + T N ++
Sbjct: 248 GVTSRWGTKKLP--RKTHKGLRKVACIG-AWHPSHVQWTVARAGQDGYHHRTSANHKIYR 304
Query: 182 V------------------------------DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
+ + K +++KG +PG +K + +R +
Sbjct: 305 IGKADDEGNASTDFDVSKKRITPMGGFVRYGEVKNDYVMLKGSIPGVRKR-VVTLRKTLW 363
Query: 212 SAVNCKG 218
V+ K
Sbjct: 364 PQVSRKA 370
>gi|193787392|dbj|BAG52598.1| unnamed protein product [Homo sapiens]
Length = 354
Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/203 (19%), Positives = 67/203 (33%), Gaps = 31/203 (15%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
+ + K GMT + + G ++ VT++ VV GY+ G
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIV-----GYVETPRG 98
Query: 53 ---AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKD----------DDLLPVGSVFS 99
+++S + F KKK +Q + V
Sbjct: 99 LRTFKTVFAEHISDECKRRFYKNWHKSKKKAHLMEIQVNGGTVAEKLDWARERLEQQVPV 158
Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159
F +++DV G+T GKG+ G R + L R G P RV
Sbjct: 159 NQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVARIG-AWHPARVAF 215
Query: 160 NKKMAGRMGGNRVTVKNLEVVSV 182
+ AG+ G + T N ++ +
Sbjct: 216 SVARAGQKGYHHRTEINKKIYKI 238
>gi|15920641|ref|NP_376310.1| 50S ribosomal protein L3P [Sulfolobus tokodaii str. 7]
gi|42559677|sp|Q975I1|RL3_SULTO RecName: Full=50S ribosomal protein L3P
gi|15621424|dbj|BAB65419.1| 343aa long hypothetical 50S ribosomal protein L3 [Sulfolobus
tokodaii str. 7]
Length = 343
Score = 73.1 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/118 (27%), Positives = 50/118 (42%), Gaps = 5/118 (4%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
F GQL+D+ G+T GKGF G +KR+ L H R G+ G
Sbjct: 199 DVFKEGQLIDIIGVTKGKGFQGVVKRYGVVELPRWHKHRKGSRKVGARGPSFST---PSY 255
Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVP--GAKKNSWILVRDSFKSAVNC 216
G+MG +R T N ++ + D I KG G +N+++++ S A
Sbjct: 256 VPQPGQMGYHRRTEYNKRILKISDDPNEINPKGGFVNYGIVRNTYLIIEGSIIGAKKR 313
>gi|116335057|ref|YP_802552.1| ribosomal protein L3 [Candidatus Carsonella ruddii PV]
gi|13272299|gb|AAK17082.1|AF274444_12 ribosomal protein L3 [Candidatus Carsonella ruddii]
gi|116235338|dbj|BAF35186.1| ribosomal protein L3 [Candidatus Carsonella ruddii PV]
Length = 136
Score = 73.1 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/103 (38%), Positives = 61/103 (59%), Gaps = 10/103 (9%)
Query: 107 QLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGR 166
+ + + ++ GKGF+G +K+ NF +HG S+S+R+ GS G QDPGRVFK KKM G+
Sbjct: 38 KTLKIISISKGKGFAGVIKKWNFKTKDKSHGCSLSYRTLGSVGQCQDPGRVFKGKKMPGK 97
Query: 167 MGGNRVTVKNLEVVSVDD---KRGLILVKGCVPGAKKNSWILV 206
MG + T VD K+ + +K +PG+ KN ++ V
Sbjct: 98 MGNKKNT------FFVDVFLRKKNIFFIKKIIPGS-KNDYLYV 133
>gi|291333648|gb|ADD93339.1| ribosomal protein L3 [uncultured archaeon MedDCM-OCT-S11-C441]
Length = 348
Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 22/132 (16%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
+ VGQ VDV G+T GKG+ G++KR L +H S R G+ G V K
Sbjct: 203 DVYDVGQEVDVVGVTKGKGWQGSIKRFGLKLL--SHKNSKRRRQGGNMGDFGTGY-VRKT 259
Query: 161 KKMAGRMGGNRVTVKNLEVVSV-DDK-----------------RGLILVKGCVPGAKKNS 202
+ AG++G ++ T N +++ + + + ++++G +PG K
Sbjct: 260 IRQAGQVGYHKRTELNKKILRISNPEESEITPAGGFLNYGEVTNPYMIIQGSLPGPAKR- 318
Query: 203 WILVRDSFKSAV 214
I RD +
Sbjct: 319 LIRFRDPTRPRK 330
>gi|156937755|ref|YP_001435551.1| 50S ribosomal protein L3P [Ignicoccus hospitalis KIN4/I]
gi|156566739|gb|ABU82144.1| LSU ribosomal protein L3P [Ignicoccus hospitalis KIN4/I]
Length = 358
Score = 72.3 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/122 (26%), Positives = 46/122 (37%), Gaps = 20/122 (16%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
G+ VDV G+T GKGF G +KR L H R G+ R
Sbjct: 212 EVIEAGKFVDVIGVTKGKGFQGVIKRFGVKELPKWHKHRKGSRRVGA---RSWGKGTSSY 268
Query: 161 KKMAGRMGGNRVTVKNLEVV-------SVDDKRG----------LILVKGCVPGAKKNSW 203
G+MG +R T N V+ ++ + G +++KG V G K
Sbjct: 269 VPQPGQMGYHRRTDYNKRVLMISDDPSKINVEGGWLHYGLVKSKYVVLKGSVFGPPKRPI 328
Query: 204 IL 205
I+
Sbjct: 329 IM 330
Score = 44.2 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 22/59 (37%), Gaps = 13/59 (22%)
Query: 5 VVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53
+ K+GMT V I+ R +PVTV+ V+ R GY +
Sbjct: 43 FLGYKVGMTHVIMIDDREHVDTAGQEIFVPVTVIETPPMVVLGARVY---GYDPNRGRY 98
>gi|16082270|ref|NP_394728.1| 50S ribosomal protein L3P [Thermoplasma acidophilum DSM 1728]
gi|42559694|sp|Q9HIQ9|RL3_THEAC RecName: Full=50S ribosomal protein L3P
gi|10640617|emb|CAC12395.1| 50S ribosomal protein L3 related protein [Thermoplasma acidophilum]
Length = 331
Score = 72.3 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/140 (27%), Positives = 55/140 (39%), Gaps = 23/140 (16%)
Query: 95 GSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP 154
+ + G+ VDV +T GKGF+G +KR L + HR T P
Sbjct: 178 KQITFTDFSKPGKFVDVVSITKGKGFTGHVKRFGVKLLPRKNRK---HRRMIGTLGPWHP 234
Query: 155 GRVFKNKKMAGRMGGNRVTVKNLEVVS------VD-------------DKRGLILVKGCV 195
V AG+MG + T+ N+ V+ VD K +L+ G +
Sbjct: 235 DWVRNTVPQAGQMGFQQRTISNVRVIKYGNKEEVDSINVRGGFLHYGFVKNDYVLLFGSI 294
Query: 196 PGAKKNSWILVRDSFKSAVN 215
PGA K I +RD + V
Sbjct: 295 PGASKR-LIKMRDPARQKVP 313
>gi|126465913|ref|YP_001041022.1| 50S ribosomal protein L3P [Staphylothermus marinus F1]
gi|212288413|sp|A3DNA4|RL3_STAMF RecName: Full=50S ribosomal protein L3P
gi|126014736|gb|ABN70114.1| LSU ribosomal protein L3P [Staphylothermus marinus F1]
Length = 395
Score = 72.3 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 50/142 (35%), Gaps = 21/142 (14%)
Query: 89 DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGST 148
+ L V F GQ +D+ G+T GKGF G +KR L H R GS
Sbjct: 237 AEKLLGNYVTVDQVFREGQFIDIIGVTKGKGFQGVIKRFGVKELPRWHKHRKGSRKIGSR 296
Query: 149 GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS-------VDDKRG----------LILV 191
G+MG +R T N ++ V K G I++
Sbjct: 297 SPGFGT---MSETPQPGQMGFHRRTEYNKRIIKIGINGWEVTPKGGFLGYGIVYGPYIML 353
Query: 192 KGCVPGAKKNSWILVRDSFKSA 213
G + G +K + +R +
Sbjct: 354 HGSIIGPRKRLLV-LRHPIRPP 374
Score = 35.0 bits (79), Expect = 7.5, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 30/84 (35%), Gaps = 11/84 (13%)
Query: 4 GVVARKLGMTC--VYNI------EGR--RIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGA 53
G VA K GM+ + + G+ IPVTVL ++ R + + +
Sbjct: 62 GYVAYKAGMSHAIIIDDRPHTFTSGKEIAIPVTVLDAPPILILGLRGYKIHPMHGL-LSF 120
Query: 54 GEAKVKNVSKPMRGFFSSVNVSPK 77
GE V + + +P
Sbjct: 121 GEVWRSPVEALKELYEKIYSDNPF 144
>gi|13310854|gb|AAK18645.1|AF250390_3 ribosomal protein L3 [Candidatus Carsonella ruddii]
Length = 136
Score = 72.3 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 38/104 (36%), Positives = 61/104 (58%), Gaps = 10/104 (9%)
Query: 105 VGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
+ + ++ ++ GKGF+G +K+ NF +HG S+S+R+ GS G QDPGRVFK KKM
Sbjct: 36 EFKTLKISSISKGKGFAGVIKKWNFKTKDKSHGCSLSYRTLGSVGQCQDPGRVFKGKKMP 95
Query: 165 GRMGGNRVTVKNLEVVSVDD---KRGLILVKGCVPGAKKNSWIL 205
G+MG ++T V+ K + +K +PG+ KN ++
Sbjct: 96 GKMGNKKIT------FFVNIFLRKNDIFFIKTIIPGS-KNDYLY 132
>gi|315425735|dbj|BAJ47391.1| large subunit ribosomal protein L3 [Candidatus Caldiarchaeum
subterraneum]
Length = 289
Score = 72.0 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 41/224 (18%), Positives = 69/224 (30%), Gaps = 48/224 (21%)
Query: 4 GVVARKLGMT--CVYNIE------GRRIP--VTVLHLDNCQVVVHR-TLDKNG------- 45
G + K+GMT + G + TV+ +V+ + +G
Sbjct: 40 GFIGYKVGMTMVHYIDNTPNSPTQGSEVAKACTVVAAPPLKVIGISLYRNVDGELVNIGK 99
Query: 46 YMAVQVGAGEAKV-----KNVSKPMRGFF----------------------SSVNVSPKK 78
Y + +V + S G + K
Sbjct: 100 YWSKEVPEDVKRRNPTFRPMPSAEEIGQLEDDVDEVRIVVATQPRLVGAGKAPRIAEIKI 159
Query: 79 KLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGV 138
+ L + F GQ VDV +T GKGF G +KR+ L+
Sbjct: 160 GGKPAEALEKAKQLVGKDLRVTDVFKEGQFVDVIAVTKGKGFQGVVKRYGVSILQ--RKS 217
Query: 139 SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+ R + G +P V +G+MG +R T N ++ +
Sbjct: 218 RKTRRGVAAIGP-WNPHYVMYTVPRSGQMGYHRRTEFNKRILRI 260
>gi|86154135|ref|ZP_01072334.1| ribosomal protein L3 [Campylobacter jejuni subsp. jejuni HB93-13]
gi|85842375|gb|EAQ59591.1| ribosomal protein L3 [Campylobacter jejuni subsp. jejuni HB93-13]
Length = 144
Score = 71.6 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 46/156 (29%), Positives = 67/156 (42%), Gaps = 15/156 (9%)
Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
+ K+GM+ I VT+L + N +V + G V G+A K V+
Sbjct: 4 IVEKIGMSRTIT--NPSIAVTLLRVVNAKVCEV----EGGKALVAYPKGKASNKCVAGQQ 57
Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
+ + S + L + D +++ V+ T G+G+SG MK
Sbjct: 58 KKYNLSAEYNRFATLEVANTEAGDLDETP--------LNEAKILKVSFNTKGRGYSGVMK 109
Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
RHNF G A+HG S HR HGS G R+ PGRV
Sbjct: 110 RHNFAGGPASHG-SRFHRRHGSIGNREWPGRVQPGM 144
>gi|320101368|ref|YP_004176960.1| 50S ribosomal protein L3P [Desulfurococcus mucosus DSM 2162]
gi|319753720|gb|ADV65478.1| LSU ribosomal protein L3P [Desulfurococcus mucosus DSM 2162]
Length = 396
Score = 71.6 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 50/131 (38%), Gaps = 21/131 (16%)
Query: 99 SPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVF 158
+ F GQ +DV G+T GKGF G +KR L H R G+
Sbjct: 247 AADVFMEGQFIDVIGVTKGKGFQGVVKRFGVKELPRWHKHRKGSRKIGARSPGFGT---M 303
Query: 159 KNKKMAGRMGGNRVTVKNLEVVSV-------DDKRG----------LILVKGCVPGAKKN 201
AG+MG +R T N ++ + + G +++KG V G K
Sbjct: 304 SEPPQAGQMGFHRRTEYNKRILRIGLNGLEATVEGGFLHYGLVYGPYLMLKGTVFGPAKR 363
Query: 202 SWILVRDSFKS 212
+++R +
Sbjct: 364 -MLILRHPVRP 373
Score = 36.1 bits (82), Expect = 3.3, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 12/55 (21%)
Query: 4 GVVARKLGMTC-VYNIE-------GRRI--PVTVLHLDNCQVVVHRTL--DKNGY 46
G K GMT V + G+ + PVT+L V+ RT ++GY
Sbjct: 62 GFPVYKAGMTHAVVVEDRPNTPVSGKEVFTPVTILDAPPIVVLGVRTYVVGEDGY 116
>gi|109100342|ref|XP_001106678.1| PREDICTED: 60S ribosomal protein L3-like isoform 1 [Macaca mulatta]
Length = 354
Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/203 (19%), Positives = 67/203 (33%), Gaps = 31/203 (15%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
+ + K GMT + + G ++ VT++ + VV GY+ G
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVEMPPMVVVGI-----AGYVETPRG 98
Query: 53 ---AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKD----------DDLLPVGSVFS 99
+++ + F KKK +Q + V
Sbjct: 99 LRTFKTVFAEHMGDECKRRFYKNWHKSKKKAHLTEIQVNGGTVAEKLDWARERLEQQVPV 158
Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159
F +++DV G+T GKG+ G + L R G R P RV
Sbjct: 159 NQVFGQDEMIDVIGVTKGKGYKGVTSHWHTKKLP--RKTHRGLRKVACIGAR-HPARVAF 215
Query: 160 NKKMAGRMGGNRVTVKNLEVVSV 182
+ AG+ G + T N ++ +
Sbjct: 216 SVARAGQKGYHHRTEINKKIYKI 238
>gi|326475993|gb|EGE00003.1| 60S ribosomal protein L3 [Trichophyton tonsurans CBS 112818]
gi|326485021|gb|EGE09031.1| 60S ribosomal protein L3 [Trichophyton equinum CBS 127.97]
Length = 410
Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 52/162 (32%), Gaps = 34/162 (20%)
Query: 87 KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHG 146
+ L + S F ++VDV +T G GFSG R L R
Sbjct: 212 EFAHGLFEKPIDVDSVFEKDEVVDVIAVTKGHGFSGVTSRWGTKKLP--RKTHKGLRKVA 269
Query: 147 STGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------------------------ 182
G P V AG+ G + T N ++ +
Sbjct: 270 CIG-AWHPSHVQWTVARAGQDGYHHRTSANHKIYRIGKADDEGNASTDFDVSKKRITPMG 328
Query: 183 ------DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+ K +++KG +PG +K + +R + V+ K
Sbjct: 329 GFVRYGEVKNDYVMLKGSIPGVRKR-VVTLRKTLWPQVSRKA 369
>gi|218884488|ref|YP_002428870.1| 50S ribosomal protein L3P [Desulfurococcus kamchatkensis 1221n]
gi|218766104|gb|ACL11503.1| 50S ribosomal protein L3P [Desulfurococcus kamchatkensis 1221n]
Length = 396
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/132 (25%), Positives = 50/132 (37%), Gaps = 21/132 (15%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
F GQ VDV G+T GKGF G +KR L H R G+
Sbjct: 249 DVFMEGQFVDVIGVTKGKGFQGVVKRFGVKELPRWHKHRKGSRKIGARSPGFGT---MSE 305
Query: 161 KKMAGRMGGNRVTVKNLEVVS-------VDDKRG----------LILVKGCVPGAKKNSW 203
AG+MG +R T N ++ + + G I++KG V G K
Sbjct: 306 PPQAGQMGFHRRTEYNKRILKMGLNGLEITIEGGFLHYGLVYGPYIMLKGTVFGPAKR-M 364
Query: 204 ILVRDSFKSAVN 215
+++R + +
Sbjct: 365 LILRHPIRPNLR 376
Score = 38.1 bits (87), Expect = 0.94, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 23/55 (41%), Gaps = 12/55 (21%)
Query: 4 GVVARKLGMTC-VYNIE-------GRRI--PVTVLHLDNCQVVVHRTL--DKNGY 46
G K GMT + + G+ + PVT+L V+ RT D+ GY
Sbjct: 62 GFPVYKAGMTHAIIVEDRPNTPVTGKEVFTPVTILDAPPIVVLGVRTYIIDEEGY 116
>gi|15897623|ref|NP_342228.1| 50S ribosomal protein L3P [Sulfolobus solfataricus P2]
gi|284174948|ref|ZP_06388917.1| 50S ribosomal protein L3P [Sulfolobus solfataricus 98/2]
gi|9910845|sp|Q9UXA8|RL3_SULSO RecName: Full=50S ribosomal protein L3P
gi|6015757|emb|CAB57584.1| ribosomal protein L3 (HMAL3) [Sulfolobus solfataricus P2]
gi|13813888|gb|AAK41018.1| LSU ribosomal protein L3AB (rpl3AB) [Sulfolobus solfataricus P2]
gi|261602391|gb|ACX91994.1| ribosomal protein L3 [Sulfolobus solfataricus 98/2]
Length = 351
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 56/131 (42%), Gaps = 21/131 (16%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
F GQL+DV G+T GKGF+G +KR++ L H R G+ G
Sbjct: 207 DVFKEGQLIDVVGVTKGKGFAGVIKRYSVVELPRWHKHRKGSRKIGTRGPSLGT---PSY 263
Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDK-----------------RGLILVKGCVPGAKKNSW 203
G++G +R T N ++ + D+ +L++G + G+KK
Sbjct: 264 TPQPGQLGFHRRTEYNKRIIKIGDEPKEINPAGGFVRYGIVRNTYVLLEGSILGSKKRP- 322
Query: 204 ILVRDSFKSAV 214
I +R+ + +
Sbjct: 323 IFLREPVRPSY 333
Score = 48.8 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 10/54 (18%)
Query: 4 GVVARKLGMTCVYNIE--------GRRI--PVTVLHLDNCQVVVHRTLDKNGYM 47
G V K+GMT V+ I+ G+ I PVTVL + + R +G
Sbjct: 44 GFVGYKVGMTHVFMIDDWPNSPTNGKEIYMPVTVLEVPPIIPLALRAYAIDGKG 97
>gi|313233372|emb|CBY24487.1| unnamed protein product [Oikopleura dioica]
Length = 303
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 62/125 (49%), Gaps = 3/125 (2%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTL-DKNGYM-AVQVGAGEAKVK 59
R+G+V +K+G+ ++ +G R+ T+L + NC V+ + + NG AV VGAG K
Sbjct: 165 RTGMVMKKIGVEPMWLRDGTRVVSTILQVQNCHVIKYFPKHEFNGRTGAVIVGAGTGKPF 224
Query: 60 NVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
++ + ++PK L F + ++ L G+ +F VGQ VDV ++ G
Sbjct: 225 LKNENYTQYCLDAGLTPKAHLARFPITENA-RLQPGTPLHVQHFHVGQYVDVVLKSVDFG 283
Query: 120 FSGAM 124
+
Sbjct: 284 EVDVV 288
>gi|145628333|ref|ZP_01784134.1| 50S ribosomal protein L4 [Haemophilus influenzae 22.1-21]
gi|145640871|ref|ZP_01796453.1| 50S ribosomal protein L3 [Haemophilus influenzae R3021]
gi|144980108|gb|EDJ89767.1| 50S ribosomal protein L4 [Haemophilus influenzae 22.1-21]
gi|145274385|gb|EDK14249.1| 50S ribosomal protein L3 [Haemophilus influenzae 22.4-21]
Length = 49
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
MAG +G RVTV++LEVV VD +R L+LVKG VPGA N ++V+ + K+
Sbjct: 1 MAGHLGAERVTVQSLEVVRVDAERKLLLVKGSVPGAI-NGDVIVKPAVKA 49
>gi|70606412|ref|YP_255282.1| 50S ribosomal protein L3P [Sulfolobus acidocaldarius DSM 639]
gi|76363364|sp|Q4JB40|RL3_SULAC RecName: Full=50S ribosomal protein L3P
gi|68567060|gb|AAY79989.1| 50S ribosomal protein L3P [Sulfolobus acidocaldarius DSM 639]
Length = 342
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 52/137 (37%), Gaps = 23/137 (16%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
F GQL D+ G+T GKGF G +KR++ H R G+ G
Sbjct: 198 DVFREGQLTDIIGVTKGKGFQGVIKRYSVVEFPRWHKHRKGSRKIGARGPSIST---PSY 254
Query: 161 KKMAGRMGGNRVTVKNLEVVSV-----------------DDKRGLILVKGCVPGAKKNSW 203
G++G +R T N ++ + K ++++G V G++K
Sbjct: 255 VPQPGQLGFHRRTEYNKRIIKIGDNVNEINPAGGIVNYGLVKNTYLVIEGSVLGSRKRPL 314
Query: 204 IL---VRDSFKSAVNCK 217
L +R S+ K
Sbjct: 315 FLRYPIRPSWSPESAPK 331
Score = 38.8 bits (89), Expect = 0.55, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 10/39 (25%)
Query: 4 GVVARKLGMTCVYNIE--------GRRI--PVTVLHLDN 32
G + K GMT VY I+ G+ + PVT++
Sbjct: 44 GFIGYKAGMTHVYMIDDKPTSPNYGKEVYTPVTIVESPP 82
>gi|328725484|ref|XP_003248496.1| PREDICTED: 50S ribosomal protein L4-like [Acyrthosiphon pisum]
Length = 267
Score = 69.6 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/60 (51%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Query: 134 ATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKG 193
+HG S HR GS G D +VFK K++ GRMGGN VT++NLEVV VD + VKG
Sbjct: 1 MSHG-SRYHRGSGSMGMASDASKVFKGKELPGRMGGNTVTMQNLEVVKVDAENN---VKG 56
>gi|327304004|ref|XP_003236694.1| 60S ribosomal protein L3 [Trichophyton rubrum CBS 118892]
gi|326462036|gb|EGD87489.1| 60S ribosomal protein L3 [Trichophyton rubrum CBS 118892]
Length = 459
Score = 69.6 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 52/162 (32%), Gaps = 34/162 (20%)
Query: 87 KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHG 146
+ L + S F ++VDV +T G GFSG R L R
Sbjct: 261 EFAHGLFEKPIDVDSVFEKDEVVDVIAVTKGHGFSGVTSRWGTKKLP--RKTHKGLRKVA 318
Query: 147 STGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------------------------ 182
G P V AG+ G + T N ++ +
Sbjct: 319 CIG-AWHPSHVQWTVARAGQDGYHHRTSANHKIYRIGKADDEGNASTDFDVSKKRITPMG 377
Query: 183 ------DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+ K +++KG +PG +K + +R + V+ K
Sbjct: 378 GFVRYGEVKNDYVMLKGSIPGVRKR-VVTLRKTLWPQVSRKA 418
>gi|118576052|ref|YP_875795.1| ribosomal protein L3 [Cenarchaeum symbiosum A]
gi|118194573|gb|ABK77491.1| ribosomal protein L3 [Cenarchaeum symbiosum A]
Length = 328
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 52/140 (37%), Gaps = 23/140 (16%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
G VDV +T GKG+ G ++R H + R GS G P V
Sbjct: 187 DVLEPGAGVDVAAITKGKGWQGVIQRMGAKR--KQHKSRKTVRELGSLGPIS-PQNVMYT 243
Query: 161 KKMAGRMGGNRVTVKNLEVVSV-------------------DDKRGLILVKGCVPGAKKN 201
AG+MG ++ N +++V K I++KG VPG +
Sbjct: 244 VPRAGQMGFHQRIEYNKRIMAVGSAGEDDAINPSGGYKHFGMVKGDYIVLKGSVPGTYRR 303
Query: 202 SWILVRDSFKSAVNCKGKVS 221
+ +R ++A K +
Sbjct: 304 -LVKLRAQIRNAPKRTSKPN 322
>gi|284073154|gb|ADB77816.1| 60S ribosomal protein L3 [Chlamydomonas reinhardtii]
gi|284073156|gb|ADB77817.1| 60S ribosomal protein L3 [Cladophora coelothrix]
Length = 384
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 47/297 (15%), Positives = 79/297 (26%), Gaps = 99/297 (33%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVV--------------- 37
+ + K GMT + G ++ PVT++ VV
Sbjct: 44 TAFMGYKAGMTHIVRDVEKPGSKLHKKETCEPVTIIECPPMVVVGAVGYVKTPRGLRSLN 103
Query: 38 -------------------HRTLDK----------NGYMAVQVGAGEAKVKNVSKPMRGF 68
+++ K +G A++ K +
Sbjct: 104 TVWAEHLSEEVKRRFYKNWYKSKKKAFTKYAKKYSDGKKAIEAELAALKKHCCVIRVLAH 163
Query: 69 FSSVNVSP---KKKLFEFRVQKD--------DDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
+ K L E +V + V + F +++D +T G
Sbjct: 164 TQVKKLGFGVKKAHLMEVQVNGGTVAQKVDFAYSMFEKQVSVDAVFQPNEMIDTIAITKG 223
Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
G G ++R L R G P RV AG+ G + T N
Sbjct: 224 HGVQGVVQRWGVTRLP--RKTHRGLRKVACIG-AWHPARVKWTVARAGQQGFHHRTEINK 280
Query: 178 EVVSVDDK-------------------------------RGLILVKGCVPGAKKNSW 203
+V + K +++KGCVPG KK +
Sbjct: 281 KVYKIGKKGDASHLATTEFDVTKKEITPMGGFPHYGVVSEDYLMIKGCVPGTKKRAI 337
>gi|257076559|ref|ZP_05570920.1| 50S ribosomal protein L3P [Ferroplasma acidarmanus fer1]
Length = 319
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 37/151 (24%), Positives = 58/151 (38%), Gaps = 23/151 (15%)
Query: 89 DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGST 148
+ + + + G VDV +T GKGF G +KR L ++ HR T
Sbjct: 160 AEEKLGKELHFDDFNSTGSFVDVISVTKGKGFQGVVKRFGVKLLPRSNRK---HRRMIGT 216
Query: 149 GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS------VD-------------DKRGLI 189
P V AG++G ++ T+ N+ ++ VD + I
Sbjct: 217 LGPWHPDWVRNTVPQAGQVGLHQRTIHNIRIMKTATKEQVDEINVKGGFLKYGLVRNDYI 276
Query: 190 LVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
L+ G + G K I +RD + AV KV
Sbjct: 277 LLYGSISGPSKR-LIKMRDPARQAVPNTDKV 306
>gi|161899261|ref|XP_001712857.1| ribosomal protein L3 [Bigelowiella natans]
gi|75756351|gb|ABA27245.1| ribosomal protein L3 [Bigelowiella natans]
Length = 370
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 50/147 (34%), Gaps = 35/147 (23%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
S F ++D G+T G G G + R L R G P RV
Sbjct: 191 SIFHENDIIDAIGITKGHGTKGVVSRWGITRLP--RKTHRGLRKVACIGP-WTPSRVAWT 247
Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKRG-------------------------------LI 189
AG+ G ++ T+ N ++ + + +
Sbjct: 248 ISRAGQKGYHKRTLFNKKIYKIGSEENFSYYSNSLSDSIVKSVNCMGGFKKFGFINNDYL 307
Query: 190 LVKGCVPGAKKNSWILVRDSFKSAVNC 216
++KG + G+ K IL+R + K+ ++
Sbjct: 308 IIKGSMTGSSKRP-ILLRKNIKNKISS 333
>gi|254572870|ref|XP_002493544.1| Protein component of the large (60S) ribosomal subunit [Pichia
pastoris GS115]
gi|238033343|emb|CAY71365.1| Protein component of the large (60S) ribosomal subunit [Pichia
pastoris GS115]
gi|328354631|emb|CCA41028.1| 60S ribosomal protein L3 [Pichia pastoris CBS 7435]
Length = 388
Score = 68.9 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 49/157 (31%), Gaps = 34/157 (21%)
Query: 92 LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR 151
++ + F + +DV +T G GF G R L R G
Sbjct: 198 HFEQTIAVDTVFEQNENIDVIAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIG-A 254
Query: 152 QDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV---DDKRG--------------------- 187
P V AG+ G + T N ++ V DD+
Sbjct: 255 WHPAHVMWTVARAGQNGFHHRTSINHKIYRVGKGDDESNGSTEYDRTKKTVTPLGGFVRY 314
Query: 188 ------LILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+++KG +PG K + +R S + + K
Sbjct: 315 GEIRNDFVMIKGSIPGPVKR-VVTLRKSLYTQTSRKA 350
>gi|159489312|ref|XP_001702641.1| ribosomal protein L3, component of cytosolic 80S ribosome and 60S
large subunit [Chlamydomonas reinhardtii]
gi|158280663|gb|EDP06420.1| ribosomal protein L3 [Chlamydomonas reinhardtii]
Length = 386
Score = 68.9 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 47/297 (15%), Positives = 79/297 (26%), Gaps = 99/297 (33%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVV--------------- 37
+ + K GMT + G ++ PVT++ VV
Sbjct: 44 TAFMGYKAGMTHIVRDVEKPGSKLHKKETCEPVTIIECPPMVVVGAVGYVKTPRGLRSLN 103
Query: 38 -------------------HRTLDK----------NGYMAVQVGAGEAKVKNVSKPMRGF 68
+++ K +G A++ K +
Sbjct: 104 TVWAEHLSEEVKRRFYKNWYKSKKKAFTKYAKKYSDGKKAIEAELAALKKHCCVIRVLAH 163
Query: 69 FSSVNVSP---KKKLFEFRVQKD--------DDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
+ K L E +V + V + F +++D +T G
Sbjct: 164 TQVKKLGFGVKKAHLMEVQVNGGTVAQKVDFAYSMFEKQVSVDAVFQPNEMIDTIAITKG 223
Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
G G ++R L R G P RV AG+ G + T N
Sbjct: 224 HGVQGVVQRWGVTRLP--RKTHRGLRKVACIG-AWHPARVKWTVARAGQQGFHHRTEINK 280
Query: 178 EVVSVDDK-------------------------------RGLILVKGCVPGAKKNSW 203
+V + K +++KGCVPG KK +
Sbjct: 281 KVYKIGKKGDASHLATTEFDVTKKEITPMGGFPHYGVVSEDYLMIKGCVPGTKKRAI 337
>gi|261327490|emb|CBH10465.1| ribosomal protein L3, putative [Trypanosoma brucei gambiense
DAL972]
Length = 480
Score = 68.9 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 47/306 (15%), Positives = 75/306 (24%), Gaps = 105/306 (34%)
Query: 5 VVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH---------------- 38
+ K GMT + + G ++ PVT+L VV
Sbjct: 97 FMVYKAGMTHIVRDVDRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKTIGTV 156
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
RT + A + A E K +
Sbjct: 157 WAHHTSVEFRRRFYKNWKQSAQLAFTKRKQFARTTEGRLAEARTLKAFEKKADIIRVVAH 216
Query: 67 GFFSSVNVSPKKKLFEFRVQ------------KDDDLLPVGSVFSPSYFTVGQLVDVTGM 114
+ + + + L V S F + DV +
Sbjct: 217 TQLRKLRNNRVGVKKAHVSEIQINGGTIAQKIELAKSLLEKEVRIDSVFQQSEACDVCAV 276
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
T G GF+G +KR L R G P RV AG+ G + T
Sbjct: 277 TKGHGFTGVVKRWGVACLP--RKTHRGLRKVACIG-AWHPSRVMYTVARAGQHGYHHRTH 333
Query: 175 KNLEVVSV--------------------------------DDKRGLILVKGCVPGAKKNS 202
N ++ + + +++KG V G ++
Sbjct: 334 LNKKIYQLGRAVSMEPNQATTAYDLTAKTITPMGGFVGYGTVRNDYVMLKGSVAGPRRRV 393
Query: 203 WILVRD 208
L R
Sbjct: 394 ITLRRP 399
>gi|315051194|ref|XP_003174971.1| 60S ribosomal protein L3 [Arthroderma gypseum CBS 118893]
gi|311340286|gb|EFQ99488.1| 60S ribosomal protein L3 [Arthroderma gypseum CBS 118893]
Length = 412
Score = 68.9 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 32/162 (19%), Positives = 52/162 (32%), Gaps = 34/162 (20%)
Query: 87 KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHG 146
+ L + S F ++VDV +T G GFSG R L R
Sbjct: 214 EFAHGLFEKPIDVDSVFEKDEVVDVIAVTKGHGFSGVTSRWGTKKLP--RKTHKGLRKVA 271
Query: 147 STGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------------------------ 182
G P V AG+ G + T N ++ +
Sbjct: 272 CIG-AWHPSHVQWTVARAGQDGYHHRTSANHKIYRIGKADDEGNASTDFDVSKKRITPMG 330
Query: 183 ------DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+ K +++KG +PG +K + +R + V+ K
Sbjct: 331 GFVRYGEVKNDYVMLKGSIPGVRKR-VVTLRKTLWPQVSRKA 371
>gi|312088746|ref|XP_003145979.1| 60S ribosomal protein L3 [Loa loa]
gi|307758859|gb|EFO18093.1| 60S ribosomal protein L3 [Loa loa]
Length = 386
Score = 68.5 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 37/237 (15%), Positives = 65/237 (27%), Gaps = 60/237 (25%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ VTVL +V
Sbjct: 44 TAFMGFKAGMTHIVREVDKPGSKVNKKEVVEAVTVLETPPMIIVGVVGYIDTPRGPRQFK 103
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ D++G ++Q + K +
Sbjct: 104 TVWAEHLSEDCRRRFYKNWNSSKKKAFQKHAKKWQDEDGMKSIQADLAKMKKYCSIIRVI 163
Query: 67 GFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMK 125
+ + + + D F +++DV G+T GKGF G
Sbjct: 164 AHTQAHIMEIQVNGGTIPEKVDWAYEHFEKQVPVDSIFAQDEMIDVIGVTKGKGFKGVTS 223
Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
R + L R G P RV AG+ G + T N ++ +
Sbjct: 224 RWHTKKLP--RKTHKGLRKVACIG-AWHPSRVQFTVARAGQKGYHHRTEVNKKIYRI 277
>gi|254579294|ref|XP_002495633.1| ZYRO0B16082p [Zygosaccharomyces rouxii]
gi|238938523|emb|CAR26700.1| ZYRO0B16082p [Zygosaccharomyces rouxii]
Length = 388
Score = 68.5 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 30/149 (20%), Positives = 48/149 (32%), Gaps = 34/149 (22%)
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
+V S F +++DV +T G G+ G R L R G
Sbjct: 197 EHFEKTVSVDSVFEQNEMIDVAAVTKGHGYEGVTHRWGTTRLP--RKTHRGLRKVACIG- 253
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV---------------------------- 182
P V + AG+ G + T N ++ V
Sbjct: 254 AWHPNHVMWSVARAGQNGFHHRTSINHKIYRVGKGDDEANAATEFDRTKKTINPMGGFPH 313
Query: 183 --DDKRGLILVKGCVPGAKKNSWILVRDS 209
+ K +++KG +PG KK + +R S
Sbjct: 314 YGEVKNDFVVIKGAIPGTKKR-VVTLRKS 341
>gi|291410166|ref|XP_002721357.1| PREDICTED: ribosomal protein L3-like isoform 2 [Oryctolagus
cuniculus]
Length = 351
Score = 68.5 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 38/203 (18%), Positives = 66/203 (32%), Gaps = 31/203 (15%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
+ + K G+T + + G + VT++ V+ GY+ G
Sbjct: 41 TAFLGYKAGLTHIVQEVDRPGSEVNKKEVVEAVTIVETPPMVVMGIV-----GYVETPRG 95
Query: 53 ---AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKD----------DDLLPVGSVFS 99
+++S + F KKK +Q + V
Sbjct: 96 LRTFKMMFAEHISDKCKRRFYKNWHKSKKKAHLMEIQVNGGTVAEKLDWARERLEQQVPV 155
Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159
F +++DV G+T GKG+ R + L H R G P RV
Sbjct: 156 SQVFGQDEMIDVIGVTKGKGYKAVTSRWHTKKLP--HKTHRGLRKVACIG-AWHPARVAF 212
Query: 160 NKKMAGRMGGNRVTVKNLEVVSV 182
+ AG+ G + T N ++ +
Sbjct: 213 SVAWAGQKGYHHRTEINKKIYKI 235
>gi|296812079|ref|XP_002846377.1| 60S ribosomal protein L3 [Arthroderma otae CBS 113480]
gi|238841633|gb|EEQ31295.1| 60S ribosomal protein L3 [Arthroderma otae CBS 113480]
Length = 458
Score = 68.5 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 31/162 (19%), Positives = 52/162 (32%), Gaps = 34/162 (20%)
Query: 87 KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHG 146
+ L + + F ++VDV +T G GFSG R L R
Sbjct: 260 EFAHGLFEKPIDVDTVFEKDEVVDVIAVTKGHGFSGVTSRWGTKKLP--RKTHKGLRKVA 317
Query: 147 STGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------------------------ 182
G P V AG+ G + T N ++ +
Sbjct: 318 CIG-AWHPSHVQWTVARAGQDGYHHRTSANHKIYRIGKAGDEGNASTDFDVSKKQITPMG 376
Query: 183 ------DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+ K +++KG +PG +K + +R + V+ K
Sbjct: 377 GFVRYGEVKNDFVMLKGSIPGVRKR-VVTLRKTLWPQVSRKA 417
>gi|225563388|gb|EEH11667.1| large subunit ribosomal protein L3 [Ajellomyces capsulatus G186AR]
Length = 552
Score = 68.5 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 48/147 (32%), Gaps = 34/147 (23%)
Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
F +++DV +T G GF+G R L R G P V
Sbjct: 369 IFEKDEMIDVIAVTKGHGFNGVTSRWGTKKLP--RKTHKGLRKVACIG-AWHPSHVQWTV 425
Query: 162 KMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLILV 191
AG+ G + T N ++ + + K +++
Sbjct: 426 ARAGQDGYHHRTSCNHKIYRIGKGSDEGNASTEFDVSKKQITPMGGFVRYGEVKNDYVMI 485
Query: 192 KGCVPGAKKNSWILVRDSFKSAVNCKG 218
KG VPG KK + +R + V+ +
Sbjct: 486 KGSVPGVKKR-VLTLRKTLYPQVSRRA 511
>gi|72387810|ref|XP_844329.1| ribosomal protein L3 [Trypanosoma brucei TREU927]
gi|62359480|gb|AAX79917.1| ribosomal protein L3, putative [Trypanosoma brucei]
gi|70800862|gb|AAZ10770.1| ribosomal protein L3, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 480
Score = 68.5 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 47/306 (15%), Positives = 75/306 (24%), Gaps = 105/306 (34%)
Query: 5 VVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH---------------- 38
+ K GMT + + G ++ PVT+L VV
Sbjct: 97 FMVYKAGMTHIVRDVDRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKTIGTV 156
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
RT + A + A E K +
Sbjct: 157 WAHHTSVEFRRRFYKNWKQSAQLAFTKRKQFARTTEGRLAEARTLKAFEKKADIIRVVAH 216
Query: 67 GFFSSVNVSPKKKLFEFRVQ------------KDDDLLPVGSVFSPSYFTVGQLVDVTGM 114
+ + + + L V S F + DV +
Sbjct: 217 TQLRKLRNNRVGVKKAHVSEIQINGGTIAQKIELAKSLLEKEVRIDSVFQQSEACDVCAV 276
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
T G GF+G +KR L R G P RV AG+ G + T
Sbjct: 277 TKGHGFTGVVKRWGVACLP--RKTHRGLRKVACIG-AWHPSRVMYTVARAGQHGYHHRTH 333
Query: 175 KNLEVVSV--------------------------------DDKRGLILVKGCVPGAKKNS 202
N ++ + + +++KG V G ++
Sbjct: 334 LNKKIYQLGRAVSMEPNQATTAYDLTAKTITPMGGFVGYGTVRNDYVMLKGSVAGPRRRV 393
Query: 203 WILVRD 208
L R
Sbjct: 394 ITLRRP 399
>gi|300121321|emb|CBK21701.2| unnamed protein product [Blastocystis hominis]
gi|300123206|emb|CBK24479.2| unnamed protein product [Blastocystis hominis]
gi|300176312|emb|CBK23623.2| unnamed protein product [Blastocystis hominis]
gi|300176758|emb|CBK25327.2| unnamed protein product [Blastocystis hominis]
Length = 387
Score = 67.7 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 55/306 (17%), Positives = 79/306 (25%), Gaps = 101/306 (33%)
Query: 3 SGVVARKLGMT---CVYNIEGR-------RIPVTVLHLDNCQVVVH-------------- 38
+ + K GMT V + G VT+L VV
Sbjct: 44 TAFMGYKAGMTHIVRVLDRPGSKAHKQEIVEAVTILETPPMVVVGIVGYVETPRGLRTLT 103
Query: 39 ------------RTLDKNGYMAVQVGAGEAKVKNVSKP---------------------- 64
R KN Y + + + + +
Sbjct: 104 TVFAEHLDDSCKRRFYKNWYNSKKKAFTKYAARMATDEGKEAMEQKLKKIVDYCQVVRVL 163
Query: 65 -MRGFFSSVNVSPKKKLFEFRVQKDDDL--------LPVGSVFSPSYFTVGQLVDVTGMT 115
K L E +V + L V F +++D G+T
Sbjct: 164 AHTQIQKLKIGQKKAHLMEIQVNGGNMEEKVAFAKSLLEKEVKVSDVFEPSEMIDTIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKGF G R L R G P RV AG+ G + T
Sbjct: 224 KGKGFEGVTTRWGTTRLP--RKTHRGLRKVACIG-AWHPSRVHFTVPRAGQNGYHHRTDV 280
Query: 176 NLEVVSV----DDK--------------------------RGLILVKGCVPGAKKNSWIL 205
N ++ + D K I+VKG V G+KK I
Sbjct: 281 NKKIYRIGAAGDAKSASTEADLTEKSITPMGGFPHYGEVNNDWIMVKGGVMGSKKR-VIT 339
Query: 206 VRDSFK 211
+R S +
Sbjct: 340 LRKSLR 345
>gi|331233068|ref|XP_003329195.1| 60S ribosomal protein L3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309308185|gb|EFP84776.1| 60S ribosomal protein L3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 388
Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 47/303 (15%), Positives = 76/303 (25%), Gaps = 100/303 (33%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ ++ K GMT + + G ++ VT++ +V
Sbjct: 44 TAMLGYKAGMTHILRDLDRPGSKMHKREVVEAVTIVETPPMVIVGVVGYVETPRGLRSLT 103
Query: 39 ------------RTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRV- 85
R KN Y + + + K+ + K +
Sbjct: 104 TVWAEHLSDEVKRRFYKNWYRSKKKAFTKYAKKHAESSTGSIARELERIRKYCTVVRVLA 163
Query: 86 -----------------------------QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTI 116
+ S F + +DV +T
Sbjct: 164 HTQIRKTGLKQKKAHLMEIQVNGGSVADKVDFAKSHFEKTFDVSSVFEQNENIDVIAVTK 223
Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
GKG+ G R L R G P +V AG+ G + T N
Sbjct: 224 GKGYEGVTHRWGCKKLP--RKTHKGLRKVACIG-AWHPSKVMFTVARAGQDGYHHRTELN 280
Query: 177 LEVVSV------------------------------DDKRGLILVKGCVPGAKKNSWILV 206
+V V K +++KG VPG KK I +
Sbjct: 281 KKVFRVGKGGDEANATTEFDTTTKAITPMGGFVRYGVVKNDFLMLKGSVPGVKKR-VITL 339
Query: 207 RDS 209
R S
Sbjct: 340 RKS 342
>gi|302412909|ref|XP_003004287.1| 60S ribosomal protein L3 [Verticillium albo-atrum VaMs.102]
gi|261356863|gb|EEY19291.1| 60S ribosomal protein L3 [Verticillium albo-atrum VaMs.102]
Length = 391
Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/141 (22%), Positives = 47/141 (33%), Gaps = 34/141 (24%)
Query: 99 SPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVF 158
S F +++DV +T GKGF+G R L R G P V
Sbjct: 206 VDSIFEQDEMIDVIAVTKGKGFNGVTSRWGTKKLP--RKTHKGLRKVACIG-AWHPSHVQ 262
Query: 159 KNKKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGL 188
AG+MG + T N +V + +
Sbjct: 263 WTVARAGQMGYHHRTSVNHKVYRIAKAGAEDSASTELDVTKKVITPLGGFVRYGEINNDF 322
Query: 189 ILVKGCVPGAKKNSWILVRDS 209
++VKG +PG KK + +R S
Sbjct: 323 VMVKGSIPGPKKR-VVTLRKS 342
>gi|212536953|ref|XP_002148632.1| 60S ribosomal protein L3 [Penicillium marneffei ATCC 18224]
gi|210068374|gb|EEA22465.1| 60S ribosomal protein L3 [Penicillium marneffei ATCC 18224]
Length = 392
Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/162 (20%), Positives = 54/162 (33%), Gaps = 34/162 (20%)
Query: 87 KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHG 146
+ L ++ + F +++DV +T G GF+G R L R
Sbjct: 194 EFAHGLFEKTIDIDTIFEQNEVIDVIAVTKGHGFNGVTSRWGTKKLP--RKTHKGLRKVA 251
Query: 147 STGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------------------------ 182
G P V AG+MG + T N ++ +
Sbjct: 252 CIG-AWHPSHVQWTVARAGQMGYHHRTSVNHKIYRIGKGSDEGNASTEFDVSKKTITPLG 310
Query: 183 ------DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+ K ++VKG VPG KK + +R + V+ K
Sbjct: 311 GFVRYGEVKNDFVIVKGSVPGVKKR-VMTLRKTLYPQVSRKA 351
>gi|1197059|gb|AAA88732.1| ribosomal protein L3 [Saccharomyces cerevisiae]
Length = 387
Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/158 (20%), Positives = 51/158 (32%), Gaps = 34/158 (21%)
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
+V S F +++D +T G GF G R L R G
Sbjct: 197 EHFEKTVAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIGA 254
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV---------------------------- 182
P V + AG+ G + T N ++ V
Sbjct: 255 C-HPAHVMWSVARAGQRGYHSRTSINHKIYRVGKGDDEANGATSFDRTKKTITPMGGFVH 313
Query: 183 --DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+ K I+VKGC+PG +K + +R S + + K
Sbjct: 314 YGEIKNDFIMVKGCIPGNRKR-IVTLRKSLYTNTSRKA 350
>gi|327349122|gb|EGE77979.1| hypothetical protein BDDG_00916 [Ajellomyces dermatitidis ATCC
18188]
Length = 392
Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 49/148 (33%), Gaps = 34/148 (22%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
S F +++DV +T G GF+G R L R G P V
Sbjct: 208 SVFEKDEMIDVIAVTKGHGFNGVTSRWGTKKLP--RKTHKGLRKVACIG-AWHPSHVQWT 264
Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
AG+ G + T N ++ + + K ++
Sbjct: 265 VARAGQDGYHHRTSCNHKIYRIGKGSDEGNASTEFDVSKKQITPMGGFVRYGEVKNDYVM 324
Query: 191 VKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+KG VPG KK + +R + V+ K
Sbjct: 325 IKGSVPGVKKR-VLTLRKTLYPQVSRKA 351
>gi|50411414|ref|XP_457044.1| DEHA2B01804p [Debaryomyces hansenii CBS767]
gi|74659529|sp|Q6BXM5|RL3_DEBHA RecName: Full=60S ribosomal protein L3
gi|49652709|emb|CAG85030.1| DEHA2B01804p [Debaryomyces hansenii]
Length = 389
Score = 67.3 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/149 (22%), Positives = 47/149 (31%), Gaps = 34/149 (22%)
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
+V S F ++VDV +T G GF G R L R G
Sbjct: 197 EHFEKTVSVDSVFEKDEMVDVAAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIG- 253
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV---------------------------- 182
P V AG+ G + T N +V V
Sbjct: 254 AWHPANVQWTVARAGQNGFHHRTSINHKVYRVGSAGDESSGATEFDRTKKTINPMGGFVR 313
Query: 183 --DDKRGLILVKGCVPGAKKNSWILVRDS 209
+ K +L+KG +PG KK + +R S
Sbjct: 314 YGNVKNDFMLLKGSIPGVKKR-IVTIRKS 341
>gi|300521620|gb|ADK26021.1| r-protein L3p [Candidatus Nitrososphaera gargensis]
Length = 332
Score = 67.3 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 56/280 (20%), Positives = 87/280 (31%), Gaps = 72/280 (25%)
Query: 4 GVVARKLGMTCVYNIE--------GRRI--PVTVLHLDNCQVVVHRTLDKNGYMAVQV-- 51
G K G V I+ G+++ P TV+ +V+ R K+ Y +
Sbjct: 44 GFAGFKAGCIHVLTIDDREKTPNFGKQLLNPATVIVTPPIRVIGIRGYKKDIYGQHAIFD 103
Query: 52 GAGEAKVKNVSKPMR-----GFFSSVNVSPK----------------------KKLFEFR 84
+ K +S+ F+ +FE
Sbjct: 104 VYAKDLPKELSRKFDAKSSDEAFAKAEGMLGSASAIMAIVAVSPNSIGLSQKTPFVFEMA 163
Query: 85 VQKDDDLLPVGSVFSP--------SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATH 136
V D V S F VGQ +DV G+T GKG G + R H
Sbjct: 164 VSGKDAKSQYDYVKSVLGREVKVSDIFQVGQNIDVFGITRGKGIEGPVTRFGIKR--KQH 221
Query: 137 GVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV-VSVDDKR--------- 186
S R+ G+ G P V G+ G ++ T N + V + ++
Sbjct: 222 KSRKSVRAVGTLGPIS-PAVVMYTVARQGQRGFHQRTEYNKRILVMSNTEKDGQNSINPS 280
Query: 187 -----------GLILVKGCVPGAKKNSWILVRDSFKSAVN 215
I+V+G VPG K I +R ++
Sbjct: 281 GGFKHFGLVKGDYIIVRGSVPGVPKR-LIKMRQPIRNVSK 319
>gi|281500833|pdb|3JYW|C Chain C, Structure Of The 60s Proteins For Eukaryotic Ribosome
Based On Cryo-Em Map Of Thermomyces Lanuginosus Ribosome
At 8.9a Resolution
Length = 362
Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/158 (20%), Positives = 51/158 (32%), Gaps = 34/158 (21%)
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
+V S F +++D +T G GF G R L R G
Sbjct: 193 EHFEKTVAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIG- 249
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV---------------------------- 182
P V + AG+ G + T N ++ V
Sbjct: 250 AWHPAHVMWSVARAGQRGYHSRTSINHKIYRVGKGDDEANGATSFDRTKKTITPMGGFVH 309
Query: 183 --DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+ K I+VKGC+PG +K + +R S + + K
Sbjct: 310 YGEIKNDFIMVKGCIPGNRKR-IVTLRKSLYTNTSRKA 346
>gi|156849033|ref|XP_001647397.1| hypothetical protein Kpol_1018p71 [Vanderwaltozyma polyspora DSM
70294]
gi|156118083|gb|EDO19539.1| hypothetical protein Kpol_1018p71 [Vanderwaltozyma polyspora DSM
70294]
Length = 387
Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/158 (20%), Positives = 49/158 (31%), Gaps = 34/158 (21%)
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
+V S F +++DV +T G GF G R L R G
Sbjct: 197 EHFEKTVAVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKRLP--RKTHRGLRKVACIGP 254
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV---------------------------- 182
P V + AG+ G + T N +V V
Sbjct: 255 -WHPAHVMWSVARAGQRGYHHRTSINHKVYRVGKGEDEANAATSFDRTKKTINPMGGFVQ 313
Query: 183 --DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
++VKG +PG KK + +R S + + K
Sbjct: 314 YGMVNNDFVMVKGSIPGCKKR-VVTLRKSLYTNTSRKA 350
>gi|302697183|ref|XP_003038270.1| hypothetical protein SCHCODRAFT_80517 [Schizophyllum commune H4-8]
gi|300111967|gb|EFJ03368.1| hypothetical protein SCHCODRAFT_80517 [Schizophyllum commune H4-8]
Length = 421
Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 45/139 (32%), Gaps = 34/139 (24%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
S F + VD+ +T G GF G R L R G P +V +
Sbjct: 241 SVFEQDECVDIIAVTKGHGFEGVTHRWGTKKLP--RKTHKGLRKVACIG-AWHPSKVMYS 297
Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
AG+ G + T N ++ V K ++
Sbjct: 298 VARAGQNGYHHRTEINKKIYRVGLGSDDGNASTEHDITKKAITPMGGFPHYGIVKNDYLM 357
Query: 191 VKGCVPGAKKNSWILVRDS 209
+KG +PG KK I +R S
Sbjct: 358 LKGSIPGTKKR-IITIRKS 375
>gi|300709014|ref|XP_002996676.1| hypothetical protein NCER_100207 [Nosema ceranae BRL01]
gi|239605995|gb|EEQ83005.1| hypothetical protein NCER_100207 [Nosema ceranae BRL01]
Length = 384
Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 46/308 (14%), Positives = 78/308 (25%), Gaps = 94/308 (30%)
Query: 3 SGVVARKLGMTCVY------NIEGRRI-----PVTVLHLDNCQVVVHRTLDKNGYMAVQV 51
+G + K GMT V + + VT++ + ++ G ++
Sbjct: 44 TGFIGYKAGMTHVIRTRTVQTKNKQSVKEILDAVTIIETPANVIYGVTGYEQTGKGLKRI 103
Query: 52 G---------------AGEAKVKNVSKPMRGFFSSVNVS--------------------- 75
G + +K
Sbjct: 104 ATVFSSHIDQGVLRRRYGLKWEEISAKLSDCSIEDKEQKIAELKKRACIIRVLVHSQPTK 163
Query: 76 -----PKKKLFEFRVQKDDDLLPVGSVFSPSYFTV---------GQLVDVTGMTIGKGFS 121
KK ++ ++ + +DV G+T GKGF+
Sbjct: 164 IPVLNLKKSHTAEIQVNGGNVEQKVDWALENFEKEINIRDIFDINENLDVIGVTKGKGFT 223
Query: 122 GAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
G +KR R G P RV AG G +R T N +V
Sbjct: 224 GVVKRFGVTKQP--RKSRKGIRKVACIG-AWHPSRVMTTVARAGGKGFHRRTEINKKVYM 280
Query: 182 V----------------------------DDKRGLILVKGCVPGAKKNSWILVRDS-FKS 212
+ K I++KG + G K + +R S K+
Sbjct: 281 IGHGKEKIKTEFDLTEKLITPMGGFPHYGSIKNDFIMLKGAIIGPSKR-VVTLRKSLLKN 339
Query: 213 AVNCKGKV 220
+ V
Sbjct: 340 HKKSEDLV 347
>gi|49258841|pdb|1S1I|C Chain C, Structure Of The Ribosomal 80s-Eef2-Sordarin Complex From
Yeast Obtained By Docking Atomic Models For Rna And
Protein Components Into A 11.7 A Cryo-Em Map. This File,
1s1i, Contains 60s Subunit. The 40s Ribosomal Subunit Is
In File 1s1h
Length = 386
Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/158 (20%), Positives = 51/158 (32%), Gaps = 34/158 (21%)
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
+V S F +++D +T G GF G R L R G
Sbjct: 196 EHFEKTVAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIG- 252
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV---------------------------- 182
P V + AG+ G + T N ++ V
Sbjct: 253 AWHPAHVMWSVARAGQRGYHSRTSINHKIYRVGKGDDEANGATSFDRTKKTITPMGGFVH 312
Query: 183 --DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+ K I+VKGC+PG +K + +R S + + K
Sbjct: 313 YGEIKNDFIMVKGCIPGNRKR-IVTLRKSLYTNTSRKA 349
>gi|295674007|ref|XP_002797549.1| 60S ribosomal protein L3 [Paracoccidioides brasiliensis Pb01]
gi|226280199|gb|EEH35765.1| 60S ribosomal protein L3 [Paracoccidioides brasiliensis Pb01]
gi|226286840|gb|EEH42353.1| 60S ribosomal protein L3 [Paracoccidioides brasiliensis Pb18]
Length = 392
Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 49/148 (33%), Gaps = 34/148 (22%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
S F +++DV +T G GF+G R L R G P V
Sbjct: 208 SVFEQDEMIDVIAVTKGHGFNGVTSRWGTKKLP--RKTHKGLRKVACIG-AWHPSHVQWT 264
Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
AG+ G + T N ++ + + K ++
Sbjct: 265 VARAGQDGYHHRTSCNHKIYRIGKGSDEGNASTEFDVSKKQITPMGGFVRYGEVKNDYVM 324
Query: 191 VKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+KG VPG KK + +R + V+ K
Sbjct: 325 LKGSVPGVKKR-VLTLRKTLYPQVSRKA 351
>gi|225684621|gb|EEH22905.1| 60S ribosomal protein L3 [Paracoccidioides brasiliensis Pb03]
Length = 384
Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 49/148 (33%), Gaps = 34/148 (22%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
S F +++DV +T G GF+G R L R G P V
Sbjct: 200 SVFEQDEMIDVIAVTKGHGFNGVTSRWGTKKLP--RKTHKGLRKVACIG-AWHPSHVQWT 256
Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
AG+ G + T N ++ + + K ++
Sbjct: 257 VARAGQDGYHHRTSCNHKIYRIGKGSDEGNASTEFDVSKKQITPMGGFVRYGEVKNDYVM 316
Query: 191 VKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+KG VPG KK + +R + V+ K
Sbjct: 317 LKGSVPGVKKR-VLTLRKTLYPQVSRKA 343
>gi|261195566|ref|XP_002624187.1| 60S ribosomal protein L3 [Ajellomyces dermatitidis SLH14081]
gi|239588059|gb|EEQ70702.1| 60S ribosomal protein L3 [Ajellomyces dermatitidis SLH14081]
gi|239610450|gb|EEQ87437.1| 60S ribosomal protein L3 [Ajellomyces dermatitidis ER-3]
Length = 346
Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 49/148 (33%), Gaps = 34/148 (22%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
S F +++DV +T G GF+G R L R G P V
Sbjct: 162 SVFEKDEMIDVIAVTKGHGFNGVTSRWGTKKLP--RKTHKGLRKVACIG-AWHPSHVQWT 218
Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
AG+ G + T N ++ + + K ++
Sbjct: 219 VARAGQDGYHHRTSCNHKIYRIGKGSDEGNASTEFDVSKKQITPMGGFVRYGEVKNDYVM 278
Query: 191 VKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+KG VPG KK + +R + V+ K
Sbjct: 279 IKGSVPGVKKR-VLTLRKTLYPQVSRKA 305
>gi|6324637|ref|NP_014706.1| Rpl3p [Saccharomyces cerevisiae S288c]
gi|2507307|sp|P14126|RL3_YEAST RecName: Full=60S ribosomal protein L3; AltName: Full=Maintenance
of killer protein 8; AltName: Full=RP1; AltName:
Full=Trichodermin resistance protein; AltName: Full=YL1
gi|315113528|pdb|3O58|C Chain C, Yeast 80s Ribosome. This Entry Consists Of The 60s Subunit
Of The First 80s In The Asymmetric Unit.
gi|315113573|pdb|3O5H|C Chain C, Yeast 80s Ribosome. This Entry Consists Of The 60s Subunit
Of The Second 80s In The Asymmetric Unit.
gi|1420207|emb|CAA99256.1| TCM1 [Saccharomyces cerevisiae]
gi|2104875|emb|CAA94548.1| YOR29-14 [Saccharomyces cerevisiae]
gi|151945689|gb|EDN63930.1| ribosomal protein L3 [Saccharomyces cerevisiae YJM789]
gi|190407398|gb|EDV10665.1| ribosomal protein L3 [Saccharomyces cerevisiae RM11-1a]
gi|256269309|gb|EEU04617.1| Rpl3p [Saccharomyces cerevisiae JAY291]
gi|259149545|emb|CAY86349.1| Rpl3p [Saccharomyces cerevisiae EC1118]
gi|285814949|tpg|DAA10842.1| TPA: Rpl3p [Saccharomyces cerevisiae S288c]
gi|323302848|gb|EGA56652.1| Rpl3p [Saccharomyces cerevisiae FostersB]
gi|323307150|gb|EGA60433.1| Rpl3p [Saccharomyces cerevisiae FostersO]
gi|323331453|gb|EGA72868.1| Rpl3p [Saccharomyces cerevisiae AWRI796]
gi|323335592|gb|EGA76876.1| Rpl3p [Saccharomyces cerevisiae Vin13]
gi|323346509|gb|EGA80796.1| Rpl3p [Saccharomyces cerevisiae Lalvin QA23]
gi|323352260|gb|EGA84796.1| Rpl3p [Saccharomyces cerevisiae VL3]
Length = 387
Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/158 (20%), Positives = 51/158 (32%), Gaps = 34/158 (21%)
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
+V S F +++D +T G GF G R L R G
Sbjct: 197 EHFEKTVAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIG- 253
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV---------------------------- 182
P V + AG+ G + T N ++ V
Sbjct: 254 AWHPAHVMWSVARAGQRGYHSRTSINHKIYRVGKGDDEANGATSFDRTKKTITPMGGFVH 313
Query: 183 --DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+ K I+VKGC+PG +K + +R S + + K
Sbjct: 314 YGEIKNDFIMVKGCIPGNRKR-IVTLRKSLYTNTSRKA 350
>gi|313103694|pdb|3IZC|C Chain C, Localization Of The Large Subunit Ribosomal Proteins Into
A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae
Translating 80s Ribosome
gi|315113303|pdb|3IZS|C Chain C, Localization Of The Large Subunit Ribosomal Proteins Into
A 6.1 A Cryo-Em Map Of Saccharomyces Cerevisiae
Translating 80s Ribosome
Length = 388
Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/158 (20%), Positives = 51/158 (32%), Gaps = 34/158 (21%)
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
+V S F +++D +T G GF G R L R G
Sbjct: 197 EHFEKTVAVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIG- 253
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV---------------------------- 182
P V + AG+ G + T N ++ V
Sbjct: 254 AWHPAHVMWSVARAGQRGYHSRTSINHKIYRVGKGDDEANGATSFDRTKKTITPMGGFVH 313
Query: 183 --DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+ K I+VKGC+PG +K + +R S + + K
Sbjct: 314 YGEIKNDFIMVKGCIPGNRKR-IVTLRKSLYTNTSRKA 350
>gi|297527410|ref|YP_003669434.1| ribosomal protein L3 [Staphylothermus hellenicus DSM 12710]
gi|297256326|gb|ADI32535.1| ribosomal protein L3 [Staphylothermus hellenicus DSM 12710]
Length = 395
Score = 66.9 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 48/144 (33%), Gaps = 23/144 (15%)
Query: 89 DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGST 148
+ L + F GQ +D+ G+T GKGF G +KR L H R GS
Sbjct: 237 AEKLLGNYITVDQVFREGQFIDIIGVTKGKGFQGVIKRFGVKELPRWHKHRKGSRKIGSR 296
Query: 149 GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRG------------------LIL 190
G+ G +R T N ++ + G I+
Sbjct: 297 SPGFGT---MSETPQPGQTGFHRRTEYNKRIIKIGV-NGWEITPKGGFLGYGIVYGPYIM 352
Query: 191 VKGCVPGAKKNSWILVRDSFKSAV 214
V G G +K + +R + +
Sbjct: 353 VYGSTIGPRKRLLV-LRHPIRPPL 375
>gi|328876376|gb|EGG24739.1| 60S ribosomal protein L3 [Dictyostelium fasciculatum]
Length = 455
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/318 (15%), Positives = 82/318 (25%), Gaps = 106/318 (33%)
Query: 3 SGVVARKLGMTCV----------YNIEGRRIPVTVLHLDNCQVV-------------VHR 39
+ + K GMT + + + VT++ VV ++
Sbjct: 44 TAFIGYKAGMTHIVRDLEKLGSKMHKKEIVEAVTIIETPPMVVVGLVGYTETLKGLRAYK 103
Query: 40 TLD--------------------------------KNGYMAVQVGAGEAKVKNVSKPMRG 67
T+ + G + + K K +
Sbjct: 104 TVWAQHLSNEFRRHFYKSWCKSKNKLAFTKYSKKFEEGTIKISNAVEAIKRKCAIIRVIA 163
Query: 68 FFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFS------------PSYFTVGQLVDVTGMT 115
V+ + ++ + + S F +++DV +T
Sbjct: 164 HSQPAKVAALHQKKAHMLEIQLNGGSIADKLKWAVDMFEKTISIESVFAENEMLDVISVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKGF G +KR L R G P RV AG+MG
Sbjct: 224 KGKGFQGVVKRWGVKKLP--RKTHKGLRKVACIG-AWHPSRVSTTVPRAGQMGFFHRVET 280
Query: 176 NLEVVSV-----------------------------------DDKRGLILVKGCVPGAKK 200
N ++ + + I+VKGCV G K
Sbjct: 281 NKKIYRIGKAQPTTGPKIPTGATEFDITAKTITPMGGFLNYGVVRNEFIMVKGCVGGPAK 340
Query: 201 NSWILVRDSFKSAVNCKG 218
I +R S + V G
Sbjct: 341 R-VITLRKSIRPNVTRAG 357
>gi|7417236|gb|AAF62506.1| ribosomal protein L3 [Trypanoplasma borreli]
Length = 416
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 55/305 (18%), Positives = 78/305 (25%), Gaps = 106/305 (34%)
Query: 5 VVARKLGMTCV----------YNIEGRRIPVTVLHLDNCQVVVH---------------- 38
+ K GMT + N + PVT+L +V
Sbjct: 46 FMVFKAGMTHIVRDLDRPGSKMNKKEVVEPVTILEAPPMAIVGVTGYRETAVGYKCIGTV 105
Query: 39 ----------RTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQ-- 86
R KN + Q+ + K SK + V + K K RV
Sbjct: 106 WAHHVSQEFRRRYYKNWKQSAQLAFTKRKSFIRSKNGKVAEQRVLKALKDKATVIRVIAH 165
Query: 87 --------------------------------KDDDLLPVGSVFSPSYFTVGQLVDVTGM 114
K L V S F + DV +
Sbjct: 166 TQLRKLRNHRVGNKKAHIQEIQVNGGTIEAKLKMAKDLLEKEVRIDSIFQQSETCDVCAV 225
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
T G GF G + R L R G P RV AG+ G + T
Sbjct: 226 TKGHGFEGVVHRWGVACLP--RKSHRGLRKVACIG-AWHPARVMYTVARAGQNGYHHRTH 282
Query: 175 KNLEVVS------VDDK--------------------------RGLILVKGCVPGAKKNS 202
N ++ VD K I++KG V G ++
Sbjct: 283 LNKKIYRIGRSSSVDPKQATTTYDLTEKVITPMGGFVGYGTVRNDFIMLKGSVAGPRRR- 341
Query: 203 WILVR 207
+ +R
Sbjct: 342 VVTLR 346
>gi|21215170|gb|AAM43909.1|AF464911_1 large subunit ribosomal protein L3 [Aspergillus fumigatus]
Length = 392
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 42/131 (32%), Gaps = 33/131 (25%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
S F +++DV +T G GF G R L R G P V
Sbjct: 208 SIFEKDEMIDVIAVTKGHGFQGVTSRWGTKKLP--RKTHKGLRKVACIG-AWHPSHVQWT 264
Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
AG+MG + T N +V + + K I+
Sbjct: 265 VARAGQMGYHHRTSCNHKVFRIGKGSDEGNASTDFDISKKQITPMGGFVRYGEVKNDYIM 324
Query: 191 VKGCVPGAKKN 201
VKG VPG KK
Sbjct: 325 VKGSVPGVKKR 335
>gi|169774881|ref|XP_001821908.1| 60S ribosomal protein L3 [Aspergillus oryzae RIB40]
gi|238496503|ref|XP_002379487.1| 60S ribosomal protein L3 [Aspergillus flavus NRRL3357]
gi|83769771|dbj|BAE59906.1| unnamed protein product [Aspergillus oryzae]
gi|220694367|gb|EED50711.1| 60S ribosomal protein L3 [Aspergillus flavus NRRL3357]
Length = 392
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/158 (21%), Positives = 51/158 (32%), Gaps = 34/158 (21%)
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
L ++ S F +++DV +T G GF G R L R G
Sbjct: 198 NLFEKTIEIDSIFEKDEVIDVIAVTKGHGFQGVTSRWGTKKLP--RKTHKGLRKVACIG- 254
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV---------------------------- 182
P V AG+MG + T N +V +
Sbjct: 255 AWHPSHVQWTVARAGQMGYHHRTSCNHKVYRIGKGSDEANASTDFDISKKQITPMGGFVR 314
Query: 183 --DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+ K ++VKG VPG KK + +R + + K
Sbjct: 315 YGEVKNDFVMVKGSVPGVKKR-VMTLRKTLYPQTSRKA 351
>gi|71001672|ref|XP_755517.1| 60S ribosomal protein L3 [Aspergillus fumigatus Af293]
gi|83305621|sp|Q8NKF4|RL3_ASPFU RecName: Full=60S ribosomal protein L3; AltName: Allergen=Asp f 23
gi|66853155|gb|EAL93479.1| 60S ribosomal protein L3 [Aspergillus fumigatus Af293]
gi|159129584|gb|EDP54698.1| 60S ribosomal protein L3 [Aspergillus fumigatus A1163]
Length = 392
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 42/131 (32%), Gaps = 33/131 (25%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
S F +++DV +T G GF G R L R G P V
Sbjct: 208 SIFEKDEMIDVIAVTKGHGFQGVTSRWGTKKLP--RKTHKGLRKVACIG-AWHPSHVQWT 264
Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
AG+MG + T N +V + + K I+
Sbjct: 265 VARAGQMGYHHRTSCNHKVFRIGKGSDEGNASTDFDISKKQITPMGGFVRYGEVKNDYIM 324
Query: 191 VKGCVPGAKKN 201
VKG VPG KK
Sbjct: 325 VKGSVPGVKKR 335
>gi|296242583|ref|YP_003650070.1| 50S ribosomal protein L3P [Thermosphaera aggregans DSM 11486]
gi|296095167|gb|ADG91118.1| LSU ribosomal protein L3P [Thermosphaera aggregans DSM 11486]
Length = 395
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 49/131 (37%), Gaps = 23/131 (17%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
FT GQ +DV G+T GKGF G +KR L H R GS
Sbjct: 249 DVFTEGQFIDVIGVTKGKGFQGVVKRFGVKVLPRWHKHRKGARKIGSRSPAFGT---MSE 305
Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKRGL------------------ILVKGCVPGAKKNS 202
AG+ G +R T N ++ + GL +++KG V G K
Sbjct: 306 PPQAGQTGFHRRTDYNKRILRI-GFNGLEVTPSGGFLHYGLVYGPYLMLKGTVFGPAKR- 363
Query: 203 WILVRDSFKSA 213
+++R +
Sbjct: 364 LLILRHPVRPP 374
Score = 35.7 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 10/48 (20%)
Query: 4 GVVARKLGMTCVYNIE--------GRRI--PVTVLHLDNCQVVVHRTL 41
G A K GMT +E G+ + PVT+L ++ R
Sbjct: 62 GFAAYKAGMTHALMVEDRPNTPFTGKEVFTPVTILDAPPMVILGLRAY 109
>gi|115641910|ref|XP_001204299.1| PREDICTED: similar to Mitochondrial 39S ribosomal protein L3 (L3mt)
(MRP-L3), partial [Strongylocentrotus purpuratus]
gi|115660375|ref|XP_001200456.1| PREDICTED: similar to Mitochondrial 39S ribosomal protein L3 (L3mt)
(MRP-L3), partial [Strongylocentrotus purpuratus]
Length = 83
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/83 (38%), Positives = 43/83 (51%)
Query: 96 SVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPG 155
+ ++F G VD+ TI KGF G MKR G A+HG + +HR G +G DPG
Sbjct: 1 TPLYAAHFRPGMYVDIAAKTIDKGFQGVMKRWGMKGQPASHGATKTHRKMGGSGGGGDPG 60
Query: 156 RVFKNKKMAGRMGGNRVTVKNLE 178
R++ KKM G MG L+
Sbjct: 61 RIWPGKKMPGFMGDKLRWTFGLK 83
>gi|320583084|gb|EFW97300.1| 60S ribosomal protein L3 [Pichia angusta DL-1]
Length = 389
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/158 (20%), Positives = 46/158 (29%), Gaps = 34/158 (21%)
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
+V S F +++DV +T G GF G R L R G
Sbjct: 197 EHFEKTVSVDSVFEQNEMIDVIAVTKGHGFEGVTHRWGTKKLP--RKTHRGTRKVACIG- 253
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD--------------------------- 183
P V AG+ G + T N +V +
Sbjct: 254 AWHPSHVMWTVARAGQRGYHHRTSINHKVYRIGKAGDEASGATEFDRTKKTITPMGGFVR 313
Query: 184 ---DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+L+KG +PG K I +R S N +
Sbjct: 314 YGAVNNDFVLLKGSIPGPVKR-VITLRKSLYGPTNRRA 350
>gi|74694166|sp|Q759R7|RL3_ASHGO RecName: Full=60S ribosomal protein L3
Length = 388
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/149 (20%), Positives = 45/149 (30%), Gaps = 34/149 (22%)
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
+V S F +++DV +T G GF G R L R G
Sbjct: 198 EHFEKTVSVDSVFEQNEMIDVIAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIG- 254
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD--------------------------- 183
P V AG+ G + T N +V +
Sbjct: 255 AWHPAHVMWTVARAGQNGYHHRTSINHKVYRIGKGGDEGNAATEFDRTKKTITPMGGFVH 314
Query: 184 ---DKRGLILVKGCVPGAKKNSWILVRDS 209
++VKG +PG +K + +R S
Sbjct: 315 YGAVNNDFVMVKGSIPGTRKR-VVTLRKS 342
>gi|50288047|ref|XP_446452.1| hypothetical protein [Candida glabrata CBS 138]
gi|74661344|sp|Q6FTJ2|RL3_CANGA RecName: Full=60S ribosomal protein L3
gi|49525760|emb|CAG59379.1| unnamed protein product [Candida glabrata]
Length = 387
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/158 (20%), Positives = 51/158 (32%), Gaps = 34/158 (21%)
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
+V S F +++D +T G GF G R L R G
Sbjct: 197 EHFEKTVSVDSVFEQNEMIDAIAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIG- 253
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV---DDK---------------------- 185
P V + AG+ G + T N ++ + DD+
Sbjct: 254 AWHPAHVMWSVARAGQRGYHHRTSINHKIYRIGKGDDEGNAATNFDRTKKTINPMGGFVH 313
Query: 186 -----RGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
++VKG +PG KK + +R S + + K
Sbjct: 314 YGMVNNDFVMVKGSIPGCKKR-VVTLRKSLYTNTSRKA 350
>gi|71019525|ref|XP_759993.1| hypothetical protein UM03846.1 [Ustilago maydis 521]
gi|46099519|gb|EAK84752.1| hypothetical protein UM03846.1 [Ustilago maydis 521]
Length = 474
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/303 (13%), Positives = 71/303 (23%), Gaps = 100/303 (33%)
Query: 3 SGVVARKLGMTCV---YNIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ ++ K GMT + + G ++ VTV+ V
Sbjct: 127 TAMIGYKAGMTHIVRDLDRPGSKMHKKEIVEAVTVIETPPMVAVGVVGYVETPRGLRSLT 186
Query: 39 ------------RTLDKNGYMAVQVGA-------------------GEAKVKNVSKPMRG 67
R KN Y + + K +
Sbjct: 187 TVWAEHLSDEVKRRFYKNWYRSKKKAFTRYAKKHSENNGASISRELERIKKYCTVVRVLA 246
Query: 68 FFSSVNVSPKKKLFEFR-----------VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTI 116
K+K + S F +++DV +T
Sbjct: 247 HTQVRKTGLKQKKAHLMEVQINGGSVAEKVDFAKEHFEKTFDVKSVFEQNEIIDVIAVTK 306
Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
G G+ G R L R G P V +G+ G + T
Sbjct: 307 GHGYEGVTARWGTKKLP--RKTHRGLRKIACIG-AWHPANVMFTVARSGQDGYHHRTEIG 363
Query: 177 LEVVSVD------------------------------DKRGLILVKGCVPGAKKNSWILV 206
++ + K +++KG PG KK + +
Sbjct: 364 KKIYRISNGEDKTSGSTDFDTTEKAITPLGGFPHYGLVKNDFVMIKGSCPGVKKR-VLTL 422
Query: 207 RDS 209
R S
Sbjct: 423 RKS 425
>gi|242810586|ref|XP_002485611.1| 60S ribosomal protein L3 [Talaromyces stipitatus ATCC 10500]
gi|218716236|gb|EED15658.1| 60S ribosomal protein L3 [Talaromyces stipitatus ATCC 10500]
Length = 398
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 33/162 (20%), Positives = 53/162 (32%), Gaps = 34/162 (20%)
Query: 87 KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHG 146
L ++ + F +++DV +T G GF+G R L R
Sbjct: 200 DFAHGLFEKTIDIDTIFEQNEVIDVIAVTKGHGFNGVTSRWGTKKLP--RKTHKGLRKVA 257
Query: 147 STGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------------------------ 182
G P V AG+MG + T N ++ +
Sbjct: 258 CIG-AWHPNHVQWTVARAGQMGYHHRTSVNHKIYRIGKGSDEGNASTEYDVSKKTITPLG 316
Query: 183 ------DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+ K ++VKG VPG KK + +R + V+ K
Sbjct: 317 GFVRYGEVKNDFVIVKGSVPGVKKR-VMTLRKTLYPQVSRKA 357
>gi|258565167|ref|XP_002583328.1| 60S ribosomal protein L3 [Uncinocarpus reesii 1704]
gi|237907029|gb|EEP81430.1| 60S ribosomal protein L3 [Uncinocarpus reesii 1704]
Length = 383
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/162 (19%), Positives = 50/162 (30%), Gaps = 34/162 (20%)
Query: 87 KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHG 146
+ L + S F +++DV +T G GF G R L R
Sbjct: 185 EFAHGLFEKPIEIDSIFEQDEMIDVIAVTKGHGFQGVTSRWGTKKLP--RKTHKGLRKVA 242
Query: 147 STGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------------------------ 182
G P V AG+ G + T N ++ +
Sbjct: 243 CIG-AWHPSHVQWTVARAGQDGYHHRTSVNHKIYRIGKGSDEGNASTDFDVSKKQITPMG 301
Query: 183 ------DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+ K +++KG PG KK + +R + V+ K
Sbjct: 302 GFVRYGEVKNDFLIIKGSCPGVKKR-VLTLRKTLYPQVSRKA 342
>gi|302307578|ref|NP_984302.2| ADR206Wp [Ashbya gossypii ATCC 10895]
gi|299789066|gb|AAS52126.2| ADR206Wp [Ashbya gossypii ATCC 10895]
Length = 387
Score = 66.2 bits (160), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/149 (20%), Positives = 45/149 (30%), Gaps = 34/149 (22%)
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
+V S F +++DV +T G GF G R L R G
Sbjct: 197 EHFEKTVSVDSVFEQNEMIDVIAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIG- 253
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD--------------------------- 183
P V AG+ G + T N +V +
Sbjct: 254 AWHPAHVMWTVARAGQNGYHHRTSINHKVYRIGKGGDEGNAATEFDRTKKTITPMGGFVH 313
Query: 184 ---DKRGLILVKGCVPGAKKNSWILVRDS 209
++VKG +PG +K + +R S
Sbjct: 314 YGAVNNDFVMVKGSIPGTRKR-VVTLRKS 341
>gi|193580256|ref|XP_001951042.1| PREDICTED: 60S ribosomal protein L3-like [Acyrthosiphon pisum]
Length = 408
Score = 65.8 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 49/311 (15%), Positives = 78/311 (25%), Gaps = 108/311 (34%)
Query: 3 SGVVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVH-------------- 38
+ +A K GMT V R PVT+L +V
Sbjct: 44 TAFIAYKAGMTHVVREADRPGSKLNKKEIVEPVTILEAPPMIIVGVVGYVETPYGLKPLK 103
Query: 39 ------------RTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS--------------- 71
R KN Y + + + K + + +
Sbjct: 104 TVFAEHLSEDCRRRFYKNWYKSKKKAFVKYSRKWQDENGKRQIAKDLGKIAKYSKVIRVV 163
Query: 72 --------VNVSPKKKLFEFRVQKD--------DDLLPVGSVFSPSYFTVGQLVDVTGMT 115
K + E +V V F +++D G+T
Sbjct: 164 AHTQMKLLKKRQKKAHIMEIQVNGGTVAEKVQWAKEHFEKPVPVSHVFAPDEMIDCIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
G+G+ G R + L R G P RV AG+ G + T
Sbjct: 224 KGRGYKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVQFTVARAGQKGYHHRTEI 280
Query: 176 NLEVVSV-------------------------------------DDKRGLILVKGCVPGA 198
N ++ + + +++KGC G
Sbjct: 281 NKKIYRIGLGIHTKDGKVIKNNASTEYDLTEKTITPMGGFPHYGEVNNDFLMIKGCCVGP 340
Query: 199 KKNSWILVRDS 209
KK I +R S
Sbjct: 341 KKR-VITLRKS 350
>gi|302833677|ref|XP_002948402.1| component of cytosolic 80S ribosome and 60S large subunit [Volvox
carteri f. nagariensis]
gi|300266622|gb|EFJ50809.1| component of cytosolic 80S ribosome and 60S large subunit [Volvox
carteri f. nagariensis]
Length = 386
Score = 65.8 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 45/297 (15%), Positives = 73/297 (24%), Gaps = 99/297 (33%)
Query: 3 SGVVARKLGMTCVYNI---EGRRI-------PVTVLHLDN-------------------C 33
+ + K GMT + G ++ PVT++
Sbjct: 44 TAFMGYKAGMTHIVREVEKPGSKLHKKETCEPVTIIECPPMVVVGVVGYVKTPRGLRSLN 103
Query: 34 QV--------VVHRTLDK-----------------NGYMAVQVGAGEAKVKNVSKPMRGF 68
V V R +G A++ K +
Sbjct: 104 TVWAEHLSEEVKRRFYKNWFKSKKKAFTKYAKKYSDGKKAIEAELASLKKHCSVIRVLAH 163
Query: 69 FSSVNVSPKKKL-----------FEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
+ +K + + V + F +++D +T G
Sbjct: 164 TQVKKLGFGQKKAHLIEIQVNGGTVAQKVDFAYAMFEKQVSVDAVFQPNEMIDTIAITKG 223
Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
G G ++R L R G P RV AG+ G + T N
Sbjct: 224 HGVQGVVQRWGVTRLP--RKTHRGLRKVACIG-AWHPARVKWTVARAGQQGFHHRTEINK 280
Query: 178 EVVSVDDK-------------------------------RGLILVKGCVPGAKKNSW 203
+V + K I+VKG VPG KK +
Sbjct: 281 KVYKIGKKGEASHLATTDFDVTKKEITPMGGFPHYGVVNEDYIMVKGAVPGTKKRAI 337
>gi|302774326|ref|XP_002970580.1| hypothetical protein SELMODRAFT_411279 [Selaginella moellendorffii]
gi|300162096|gb|EFJ28710.1| hypothetical protein SELMODRAFT_411279 [Selaginella moellendorffii]
Length = 115
Score = 65.8 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Query: 7 ARKLGMTC--VYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
K GMT V++ GRRIP+TVL D+ QVV +T+D + A+QVG
Sbjct: 63 GVKCGMTSTAVWDKWGRRIPITVLWADDNQVVQVKTVDHETFKALQVG 110
>gi|121715726|ref|XP_001275472.1| 60S ribosomal protein L3 [Aspergillus clavatus NRRL 1]
gi|119403629|gb|EAW14046.1| 60S ribosomal protein L3 [Aspergillus clavatus NRRL 1]
Length = 392
Score = 65.8 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 42/131 (32%), Gaps = 33/131 (25%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
S F +++DV +T G GF G R L R G P V
Sbjct: 208 SIFEKDEMIDVIAVTKGHGFQGVTSRWGTKKLP--RKTHKGLRKVACIG-AWHPSHVQWT 264
Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
AG+MG + T N +V + + K ++
Sbjct: 265 VARAGQMGYHHRTSCNHKVFRIGKGTDEGNASTEFDISKKQITPMGGFVRYGEVKNDYVM 324
Query: 191 VKGCVPGAKKN 201
VKG VPG KK
Sbjct: 325 VKGSVPGVKKR 335
>gi|329765069|ref|ZP_08256653.1| 50S ribosomal protein L3P [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329138446|gb|EGG42698.1| 50S ribosomal protein L3P [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 330
Score = 65.4 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 52/133 (39%), Gaps = 24/133 (18%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
F G +DV +T GKG+ G ++R H + R S G V +
Sbjct: 188 QIFETGATIDVAAITKGKGWQGVIQRFGVKK--KQHKSRKTVREVASLGPISPAS-VMYS 244
Query: 161 KKMAGRMGGNRVTVKNLEVVSV-DDKRG-------------------LILVKGCVPGAKK 200
AG+MG ++ T + +++ + + + I++KG VPG +
Sbjct: 245 VPRAGQMGFHQRTEYDKKIMVIGNTENNQIKINPDGGYKHFGLVKGDFIILKGSVPGTYR 304
Query: 201 NSWILVRDSFKSA 213
I +R ++A
Sbjct: 305 R-LIKLRSQIRNA 316
>gi|67540064|ref|XP_663806.1| RL3_NEUCR 60S ribosomal protein L3 [Aspergillus nidulans FGSC A4]
gi|40738798|gb|EAA57988.1| RL3_NEUCR 60S ribosomal protein L3 [Aspergillus nidulans FGSC A4]
Length = 447
Score = 65.4 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 45/138 (32%), Gaps = 34/138 (24%)
Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
F +++DV +T G GF G R L R G P V
Sbjct: 264 IFEKDEMIDVIAVTKGHGFQGVTSRWGTKKLP--RKTHKGLRKVACIG-AWHPSHVQWTV 320
Query: 162 KMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLILV 191
AG+MG + T N +V + + K IL+
Sbjct: 321 ARAGQMGYHHRTSCNHKVFRIGKGSDEANASTDFDVSKKQITPLGGFVRYGEVKNDFILL 380
Query: 192 KGCVPGAKKNSWILVRDS 209
KG VPG KK + +R +
Sbjct: 381 KGSVPGVKKR-VMTLRKT 397
>gi|72387812|ref|XP_844330.1| ribosomal protein L3, mitochondrial [Trypanosoma brucei TREU927]
gi|62359481|gb|AAX79918.1| ribosomal protein L3, mitochondrial, putative [Trypanosoma brucei]
gi|70800863|gb|AAZ10771.1| ribosomal protein L3, mitochondrial, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
gi|261327491|emb|CBH10466.1| ribosomal protein L3, mitochondrial, putative [Trypanosoma brucei
gambiense DAL972]
Length = 429
Score = 65.4 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 47/306 (15%), Positives = 75/306 (24%), Gaps = 105/306 (34%)
Query: 5 VVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH---------------- 38
+ K GMT + + G ++ PVT+L VV
Sbjct: 46 FMVYKAGMTHIVRDVDRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKTIGTV 105
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
RT + A + A E K +
Sbjct: 106 WAHHTSVEFRRRFYKNWKQSAQLAFTKRKQFARTTEGRLAEARTLKAFEKKADIIRVVAH 165
Query: 67 GFFSSVNVSPKKKLFEFRVQ------------KDDDLLPVGSVFSPSYFTVGQLVDVTGM 114
+ + + + L V S F + DV +
Sbjct: 166 TQLRKLRNNRVGVKKAHVSEIQINGGTIAQKIELAKSLLEKEVRIDSVFQQSEACDVCAV 225
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
T G GF+G +KR L R G P RV AG+ G + T
Sbjct: 226 TKGHGFTGVVKRWGVACLP--RKTHRGLRKVACIG-AWHPSRVMYTVARAGQHGYHHRTH 282
Query: 175 KNLEVVSV--------------------------------DDKRGLILVKGCVPGAKKNS 202
N ++ + + +++KG V G ++
Sbjct: 283 LNKKIYQLGRAVSMEPNQATTAYDLTAKTITPMGGFVGYGTVRNDYVMLKGSVAGPRRRV 342
Query: 203 WILVRD 208
L R
Sbjct: 343 ITLRRP 348
>gi|119481241|ref|XP_001260649.1| transcriptional corepressor Cyc8, putative [Neosartorya fischeri
NRRL 181]
gi|119408803|gb|EAW18752.1| transcriptional corepressor Cyc8, putative [Neosartorya fischeri
NRRL 181]
Length = 392
Score = 65.4 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/131 (23%), Positives = 42/131 (32%), Gaps = 33/131 (25%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
S F +++DV +T G GF G R L R G P V
Sbjct: 208 SIFEKDEMIDVIAVTKGHGFQGVTSRWGTKKLP--RKTHKGLRKVACIG-AWHPSHVQWT 264
Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
AG+MG + T N +V + + K ++
Sbjct: 265 VARAGQMGYHHRTSCNHKVFRIGKGSDEGNASTEFDISKKQITPMGGFVRYGEVKNDYVM 324
Query: 191 VKGCVPGAKKN 201
VKG VPG KK
Sbjct: 325 VKGSVPGVKKR 335
>gi|19173079|ref|NP_597630.1| 60S RIBOSOMAL PROTEIN L3 [Encephalitozoon cuniculi GB-M1]
gi|85014317|ref|XP_955654.1| 60S ribosomal protein L3 [Encephalitozoon cuniculi GB-M1]
gi|51701710|sp|Q8SQI3|RL3_ENCCU RecName: Full=60S ribosomal protein L3
gi|19168746|emb|CAD26265.1| 60S RIBOSOMAL PROTEIN L3 [Encephalitozoon cuniculi GB-M1]
gi|19171348|emb|CAD27073.1| 60S RIBOSOMAL PROTEIN L3 [Encephalitozoon cuniculi GB-M1]
Length = 383
Score = 65.4 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 36/137 (26%), Positives = 50/137 (36%), Gaps = 32/137 (23%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
F V + +D G+T GKGF G +KR R G P RV +
Sbjct: 203 EVFGVNENIDTIGVTKGKGFQGTVKRFGVRKQP--RKSRKGIRKVACIG-AWHPSRVMYS 259
Query: 161 KKMAGRMGGNRVTVKNLEVVSV----------------------------DDKRGLILVK 192
AG+MG +R T KN V + + + I+VK
Sbjct: 260 IARAGQMGFHRRTEKNKRVYMIGNGSSNIKTEFDLTEKPISPMGGFPHYGEVRNDFIMVK 319
Query: 193 GCVPGAKKNSWILVRDS 209
G V GA+K + +R S
Sbjct: 320 GAVVGARKR-VVTLRKS 335
>gi|71984538|ref|NP_001021254.1| Ribosomal Protein, Large subunit family member (rpl-3)
[Caenorhabditis elegans]
gi|1710557|sp|P50880|RL3_CAEEL RecName: Full=60S ribosomal protein L3
gi|1181129|emb|CAA93269.1| ribosomal protein L3 [Caenorhabditis elegans]
gi|1181131|emb|CAA93268.1| ribosomal protein L3 [Caenorhabditis elegans]
gi|3874745|emb|CAA91277.1| C. elegans protein F13B10.2a, confirmed by transcript evidence
[Caenorhabditis elegans]
gi|3875827|emb|CAA90183.1| C. elegans protein F13B10.2a, confirmed by transcript evidence
[Caenorhabditis elegans]
Length = 401
Score = 65.4 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 43/308 (13%), Positives = 79/308 (25%), Gaps = 105/308 (34%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ VT++ +
Sbjct: 44 TAFLGYKAGMTHIVRDVDKPGSKVNKKEVVEAVTIVETPPMVIAGVTGYVDTPQGPRALT 103
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ D++G ++ + K S +
Sbjct: 104 TIWAEHLSEEARRRFYSNWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVI 163
Query: 67 GFF----------SSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMT 115
+ V + + D + F +++D G+T
Sbjct: 164 AHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQVQVDTVFAQDEMIDTIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
G GF G R + L R G P RV AG+ G + T+
Sbjct: 224 RGHGFKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVAFTVARAGQKGFHHRTII 280
Query: 176 NLEVVSV-------DDKRG---------------------------LILVKGCVPGAKKN 201
N ++ + + K I+++G V G KK
Sbjct: 281 NNKIYRIGKSALTEEGKNNGSTEFDLTQKTITPMGGFPRYGIVNQDYIMLRGAVLGPKKR 340
Query: 202 SWILVRDS 209
I +R S
Sbjct: 341 -LITLRKS 347
>gi|316971123|gb|EFV54952.1| 60S ribosomal protein L3 [Trichinella spiralis]
Length = 405
Score = 65.4 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 52/301 (17%), Positives = 79/301 (26%), Gaps = 98/301 (32%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G +I VTVL +V
Sbjct: 60 TAFIGYKAGMTHIVREVDKPGSKINKKDVVEAVTVLETPPMVIVGKCVVGYIETPQGLRA 119
Query: 39 -----------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMRGFF 69
+ D+ G +Q +
Sbjct: 120 FKTIWAEHLSDDCKRRYKCERKAFTKASKKWQDEAGVKEIQTDFARMIKYCKVIRVIAHT 179
Query: 70 S---SVNVSPKKKLFEFRVQKD--------DDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
+ K + E ++ V S F +++D G+T GK
Sbjct: 180 QMKLLHHGQKKAHIMEIQLNGGTIEEKVNWAREHLEKQVPVDSVFARDEMIDCIGVTKGK 239
Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
GF G R + L R G P RV AG+ G + T N +
Sbjct: 240 GFKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVRYTVARAGQKGYHHRTEINKK 296
Query: 179 VVSV----DDKRG--------------------------LILVKGCVPGAKKNSWILVRD 208
+ + D K G +L+KGC G KK I +R
Sbjct: 297 IYRIGKGADKKNGSTEYDLTEKTINPMGGFPHYGMVNQDYVLIKGCCMGPKKR-VITLRK 355
Query: 209 S 209
S
Sbjct: 356 S 356
>gi|162605876|ref|XP_001713453.1| 60S ribosomal protein L3 [Guillardia theta]
gi|13794385|gb|AAK39762.1|AF083031_119 60S ribosomal protein L3 [Guillardia theta]
Length = 375
Score = 65.4 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 50/309 (16%), Positives = 85/309 (27%), Gaps = 94/309 (30%)
Query: 3 SGVVARKLGMTCV----------YNIEGRRIPVTVLHLDNCQVVV----HRTLD------ 42
+G + K GMT V N VT+L +V +T
Sbjct: 44 TGSIGYKSGMTHVERLVDLPNSKMNKREVIDAVTILETPPILIVGFVGYIKTPKGIRSLN 103
Query: 43 -----------KNGYMAVQVGAGEAKVKNVSKPMR-GFFSSVNVSPKKKLFEFRVQKDD- 89
K Y + + + +K + F L +
Sbjct: 104 TVWIDEVDESIKRNYYKNWYKSKKKSFTHYNKIVNLKKFKETYFKYCSILRCIISSEIKK 163
Query: 90 ---------------------------DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
+ + + F+ +LVD+ G++ GKGF G
Sbjct: 164 IGFKKRKSKILEIQLNGGKPEHKLDYIEKILGKKITIDQIFSENELVDIIGISKGKGFQG 223
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
+ R L R G P RV AG+ G + T N+++ ++
Sbjct: 224 VVSRWGVTKLP--RKTHRGARKVACVG-SWHPSRVSFTVARAGQSGYHHRTSLNIKIYAI 280
Query: 183 ------------------------------DDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
K +++KG + G+KK I +R S
Sbjct: 281 GKDGFISNHILTNNKSNFSINPMGGFPFYGLVKSDFLILKGGIVGSKKRGLI-LRKSIHK 339
Query: 213 AVNCKGKVS 221
N K ++
Sbjct: 340 NKNFKENIN 348
>gi|6537320|gb|AAF15600.1|AF198447_1 60S ribosomal protein L3 [Emericella nidulans]
gi|259479602|tpe|CBF69975.1| TPA: 60S ribosomal protein L3 [Source:UniProtKB/TrEMBL;Acc:Q9UV31]
[Aspergillus nidulans FGSC A4]
Length = 392
Score = 65.0 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 45/138 (32%), Gaps = 34/138 (24%)
Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
F +++DV +T G GF G R L R G P V
Sbjct: 209 IFEKDEMIDVIAVTKGHGFQGVTSRWGTKKLP--RKTHKGLRKVACIG-AWHPSHVQWTV 265
Query: 162 KMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLILV 191
AG+MG + T N +V + + K IL+
Sbjct: 266 ARAGQMGYHHRTSCNHKVFRIGKGSDEANASTDFDVSKKQITPLGGFVRYGEVKNDFILL 325
Query: 192 KGCVPGAKKNSWILVRDS 209
KG VPG KK + +R +
Sbjct: 326 KGSVPGVKKR-VMTLRKT 342
>gi|50311593|ref|XP_455822.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74660266|sp|Q6CJR7|RL3_KLULA RecName: Full=60S ribosomal protein L3
gi|49644958|emb|CAG98530.1| KLLA0F16511p [Kluyveromyces lactis]
Length = 387
Score = 65.0 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 33/158 (20%), Positives = 52/158 (32%), Gaps = 34/158 (21%)
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
+V S F +++DV +T G GF G R L R G
Sbjct: 197 EHFEKTVAVDSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIG- 253
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV---DDK---------------------- 185
P V + AG+ G + T N +V V DD+
Sbjct: 254 AWHPAHVMWSVARAGQRGYHHRTSINHKVYRVGKGDDEANAATEFDRTKKTITPMGGFVH 313
Query: 186 -----RGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+++KG +PG +K + +R S + + K
Sbjct: 314 YGAINNDFVILKGSIPGTRKR-VVTLRKSLYTNTSRKA 350
>gi|146417684|ref|XP_001484810.1| 60S ribosomal protein L3 [Meyerozyma guilliermondii ATCC 6260]
gi|146390283|gb|EDK38441.1| 60S ribosomal protein L3 [Meyerozyma guilliermondii ATCC 6260]
Length = 389
Score = 65.0 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 46/149 (30%), Gaps = 34/149 (22%)
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
+V S F +++DV +T G GF G R L R G
Sbjct: 197 EHFEKTVTVDSVFEQNEMIDVIAVTRGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIG- 253
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV---------------------------- 182
P V AG+ G + T N +V V
Sbjct: 254 AWHPANVNWTVARAGQNGYHHRTSINHKVYRVGSGADESNGATEFDRTKKSINPMGGFVR 313
Query: 183 --DDKRGLILVKGCVPGAKKNSWILVRDS 209
+ ++VKG +PG KK + +R S
Sbjct: 314 YGNVNNDFVMVKGSIPGTKKR-VVTLRKS 341
>gi|164659874|ref|XP_001731061.1| hypothetical protein MGL_2060 [Malassezia globosa CBS 7966]
gi|159104959|gb|EDP43847.1| hypothetical protein MGL_2060 [Malassezia globosa CBS 7966]
Length = 345
Score = 65.0 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/155 (22%), Positives = 51/155 (32%), Gaps = 34/155 (21%)
Query: 87 KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHG 146
+ L +V S FT +LVDV G+T GKG+ G R L R
Sbjct: 148 DFANNLFEKTVDVNSLFTQDELVDVIGVTKGKGYEGVTARWGITKLP--RKTHKGLRKVA 205
Query: 147 STGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------------------------ 182
G P V +G+ G + T N ++ +
Sbjct: 206 CIG-AWHPANVMFTVARSGQDGYHHRTELNKKIYRIGNGADKASGATEFDTTQKSITPMG 264
Query: 183 ------DDKRGLILVKGCVPGAKKNSWILVRDSFK 211
K +++KG PG KK + +R S K
Sbjct: 265 GFPHYGIVKNDFLMIKGSCPGVKKR-VLTIRKSQK 298
>gi|114686508|ref|XP_525601.2| PREDICTED: similar to ribosomal protein L3 [Pan troglodytes]
Length = 474
Score = 65.0 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 36/247 (14%), Positives = 66/247 (26%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ VT++ VV
Sbjct: 115 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFK 174
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ D++G ++ K +
Sbjct: 175 TVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVI 234
Query: 67 GF---------FSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMT 115
++ + +K D V F +++DV G+T
Sbjct: 235 AHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 294
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV + AG+ G + T
Sbjct: 295 KGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAFSVARAGQKGYHHRTEI 351
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 352 NKKIYKI 358
>gi|169861488|ref|XP_001837378.1| 60S ribosomal protein L3 [Coprinopsis cinerea okayama7#130]
gi|116501399|gb|EAU84294.1| 60S ribosomal protein L3 [Coprinopsis cinerea okayama7#130]
Length = 388
Score = 65.0 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 46/303 (15%), Positives = 74/303 (24%), Gaps = 100/303 (33%)
Query: 3 SGVVARKLGMTCV----------YNIEGRRIPVTVLHLDNCQVVVH-------------- 38
+ ++ K GMT V ++ VT++ V
Sbjct: 44 TAMMGYKAGMTHVVRDLDRPGSKFHKREVVEAVTIIETPPMIAVGLVGYVETPRGLRTLT 103
Query: 39 -------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMRG 67
+ ++G +VQ + +
Sbjct: 104 TVWANHLSDEVKRRFYKNWYRSKKKAFTRYAKKNAEDGGKSVQRELERIRKYCSVVRVLA 163
Query: 68 F---------FSSVNVSPKKKLFEFRVQKDDDLLPVGSVF--SPSYFTVGQLVDVTGMTI 116
++ + K D + S F + VDV +T
Sbjct: 164 HTQIRKTGLAQKKAHLMEIQINGGSVADKVDFGYKLFEKPIEVSSVFEQDENVDVIAVTK 223
Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
G GF G R L R G P V + AG+ G + T N
Sbjct: 224 GHGFEGVTHRWGTKKLP--RKTHKGLRKVACIG-AWHPSNVMFSVARAGQNGYHHRTEIN 280
Query: 177 LEVVSV------------------------------DDKRGLILVKGCVPGAKKNSWILV 206
++ + K +LVKG +PG KK I +
Sbjct: 281 KKIYRIGLGSDDGNASTESDITKKVITPLGGFPHYGVVKNDFLLVKGSIPGTKKR-VITI 339
Query: 207 RDS 209
R S
Sbjct: 340 RKS 342
>gi|156359547|ref|XP_001624829.1| predicted protein [Nematostella vectensis]
gi|156211631|gb|EDO32729.1| predicted protein [Nematostella vectensis]
Length = 406
Score = 65.0 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 49/312 (15%), Positives = 82/312 (26%), Gaps = 109/312 (34%)
Query: 3 SGVVARKLGMTCVY----------NIEGRRIPVTVLHLDNCQVVVH-------------R 39
+ + K GMT + N + + VT++ VV +
Sbjct: 44 TAFIGFKAGMTHILREVEKPGSKLNKKEKVEAVTIIETPPMMVVGVVGYIETPRGMRVLK 103
Query: 40 TL---------------------------------DKNGYMAVQVGAGEAKVKNVSKPMR 66
T+ D +G +++ K +
Sbjct: 104 TIWAEHLSEECKRRFYKNWCNSKKKAFTKASKRWADDDGKKSIEEDFNTMKKYCKVIRVI 163
Query: 67 GFFSSV---NVSPKKKLFEFRVQKDDDLLPVGSV---------FSPSYFTVGQLVDVTGM 114
K + E +V D+ F+ +++DV G+
Sbjct: 164 CHTQQKLLKMRQKKAHIMEIQVNGGKDVAEKVDWCRERLENPAPVRKVFSPDEMIDVIGV 223
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
T G GF G R L R G P RV + AG+ G + T
Sbjct: 224 TKGHGFKGVTYRWGTKKLP--RKTHKGLRKVACIG-AWHPARVSFSVARAGQAGYHHRTE 280
Query: 175 KNLEVVSV----------------DDKRGL---------------------ILVKGCVPG 197
N ++ + + L ++VKGCV G
Sbjct: 281 LNKKIYRIGQGIHKKDGKVIKNNASTEYDLTDKSITPMGGFPHYGQVNEDFLMVKGCVVG 340
Query: 198 AKKNSWILVRDS 209
KK + +R S
Sbjct: 341 PKKR-VLTLRKS 351
>gi|126136060|ref|XP_001384554.1| 60S large subunit ribosomal protein L3.e [Scheffersomyces stipitis
CBS 6054]
gi|126091752|gb|ABN66525.1| 60S large subunit ribosomal protein L3.e [Scheffersomyces stipitis
CBS 6054]
Length = 389
Score = 65.0 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 46/149 (30%), Gaps = 34/149 (22%)
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
+V S F +++DV +T G GF G R L R G
Sbjct: 197 EHFEKTVSVSSVFEQNEMIDVVAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIG- 253
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDK------------------------- 185
P V AG+ G + T N +V V +
Sbjct: 254 AWHPANVNWTVARAGQNGYHHRTSINHKVYRVGTEGDESSGATEFDRTKKTINPMGGFVR 313
Query: 186 -----RGLILVKGCVPGAKKNSWILVRDS 209
+L+KG +PG +K + +R S
Sbjct: 314 YGNVNNDFVLLKGSIPGIRKR-VVTLRKS 341
>gi|154282025|ref|XP_001541825.1| 60S ribosomal protein L3 [Ajellomyces capsulatus NAm1]
gi|150412004|gb|EDN07392.1| 60S ribosomal protein L3 [Ajellomyces capsulatus NAm1]
Length = 346
Score = 65.0 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 29/147 (19%), Positives = 48/147 (32%), Gaps = 34/147 (23%)
Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
F +++DV +T G GF+G R L R G P V
Sbjct: 163 IFEKDEMIDVIAVTKGHGFNGVTSRWGTKKLP--RKTHKGLRKVACIG-AWHPSHVQWTV 219
Query: 162 KMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLILV 191
AG+ G + T N ++ + + K +++
Sbjct: 220 ARAGQDGYHHRTSCNHKIYRIGKGSDEGNASTEFDVSKKQITPMGGFVRYGEVKNDYVMI 279
Query: 192 KGCVPGAKKNSWILVRDSFKSAVNCKG 218
KG VPG KK + +R + V+ +
Sbjct: 280 KGSVPGVKKR-VLTLRKTLYPQVSRRA 305
>gi|255725262|ref|XP_002547560.1| 60S ribosomal protein L3 [Candida tropicalis MYA-3404]
gi|240135451|gb|EER35005.1| 60S ribosomal protein L3 [Candida tropicalis MYA-3404]
Length = 389
Score = 64.6 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 46/149 (30%), Gaps = 34/149 (22%)
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
V S F +++DV +T G GF G R L R G
Sbjct: 197 EHFEKEVSVDSVFEQDEMIDVIAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIG- 253
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV---------------------------- 182
P V AG+ G + T N +V V
Sbjct: 254 AWHPANVNWTVARAGQNGYHHRTSINHKVYRVGKGSDEANGATEFDRTKKTINPMGGFVR 313
Query: 183 --DDKRGLILVKGCVPGAKKNSWILVRDS 209
+ + +L+KG +PG KK + +R S
Sbjct: 314 YGNVQNDFVLLKGSIPGIKKR-VVTLRKS 341
>gi|240275987|gb|EER39500.1| large subunit ribosomal protein L3 [Ajellomyces capsulatus H143]
gi|325093348|gb|EGC46658.1| large subunit ribosomal protein L3 [Ajellomyces capsulatus H88]
Length = 439
Score = 64.6 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 48/147 (32%), Gaps = 34/147 (23%)
Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
F +++DV +T G GF+G R L R G P V
Sbjct: 256 IFEKDEMIDVIAVTKGHGFNGVTSRWGTKKLP--RKTHKGLRKVACIG-AWHPSHVQWTV 312
Query: 162 KMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLILV 191
AG+ G + T N ++ + + + +++
Sbjct: 313 ARAGQDGYHHRTSCNHKIYRIGKGSDEGNASTEFDVSKKQITPMGGFVRYGEVRNDYVMI 372
Query: 192 KGCVPGAKKNSWILVRDSFKSAVNCKG 218
KG VPG KK + +R + V+ +
Sbjct: 373 KGSVPGVKKR-VLTLRKTLYPQVSRRA 398
>gi|238601436|ref|XP_002395411.1| hypothetical protein MPER_04539 [Moniliophthora perniciosa FA553]
gi|215466097|gb|EEB96341.1| hypothetical protein MPER_04539 [Moniliophthora perniciosa FA553]
Length = 219
Score = 64.6 bits (156), Expect = 8e-09, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 45/139 (32%), Gaps = 34/139 (24%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
S F + +DV +T G GF G R L R G P +V +
Sbjct: 39 SVFEQDENIDVIAVTKGHGFEGVTHRWGTKKLP--RKTHKGLRKVACIG-AWHPSKVMFS 95
Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
AG+ G + T N ++ + K ++
Sbjct: 96 VARAGQSGYHHRTELNKKIYRIGSGSDEGNASTEHDISKKPITPMGGFPHYGIVKNDFLM 155
Query: 191 VKGCVPGAKKNSWILVRDS 209
+KG +PG KK I +R S
Sbjct: 156 LKGSIPGTKKR-VITIRKS 173
>gi|320586035|gb|EFW98714.1| 60S ribosomal protein L3 [Grosmannia clavigera kw1407]
Length = 442
Score = 64.6 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 47/300 (15%), Positives = 71/300 (23%), Gaps = 100/300 (33%)
Query: 6 VARKLGMTCV---YNIEG-------RRIPVTVLHLDNCQVVV------------------ 37
+ K GMT + + G VT++ VV
Sbjct: 97 LGYKAGMTTIVRDLDRPGAKSHKKEVVEAVTIVDTPPMIVVGLVGYIETPRGLRSLTTVW 156
Query: 38 --------HRTLDKNGYMAVQVGA-------------------GEAKVKNVSKPMRGFFS 70
R KN Y + + K +
Sbjct: 157 AEHLGDELKRRFYKNWYKSKKKAFTKYAKKHSESKGVSITREIERIKKYCTVVRVLAHTQ 216
Query: 71 SVNVSPKKKL-----------FEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
K+K + L S F +++DV +T G G
Sbjct: 217 IRKTPLKQKKAHLMEIQINGGSTADKVEFGQGLFEKPFSVDSIFEQDEVIDVIAVTKGHG 276
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F G R L R G P V AG+ G + T N ++
Sbjct: 277 FEGVTARWGTKKLP--RKTHKGLRKVACIG-AWHPAHVQWTVARAGQRGYHHRTSVNHKI 333
Query: 180 VSV-----------DDK-------------------RGLILVKGCVPGAKKNSWILVRDS 209
+ D ++VKG +PG KK + +R S
Sbjct: 334 YRIGKGGSDDNASTDLDVTKKTITPLGGFVRYGEINNDFVMVKGSIPGTKKR-VVTLRKS 392
>gi|242219392|ref|XP_002475476.1| 60S ribosomal protein L3 [Postia placenta Mad-698-R]
gi|220725335|gb|EED79327.1| 60S ribosomal protein L3 [Postia placenta Mad-698-R]
Length = 388
Score = 64.6 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 49/153 (32%), Gaps = 34/153 (22%)
Query: 87 KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHG 146
+ L V + F ++VDV +T G GF G R L R
Sbjct: 194 EFAHGLFEKPVEVSTVFEQDEVVDVIAVTKGHGFEGVTHRWGTKKLP--RKTHKGLRKVA 251
Query: 147 STGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------------------------ 182
G P +V + AG+ G + T N ++ +
Sbjct: 252 CIG-AWHPSKVMFSVARAGQNGYHHRTELNKKIYRIGSGEDTGNASTEHDITKKVITPMG 310
Query: 183 ------DDKRGLILVKGCVPGAKKNSWILVRDS 209
K +++KG +PG KK I +R S
Sbjct: 311 GFPHYGIVKNDYLMLKGSIPGTKKR-VITIRKS 342
>gi|149240189|ref|XP_001525970.1| 60S ribosomal protein L3 [Lodderomyces elongisporus NRRL YB-4239]
gi|146450093|gb|EDK44349.1| 60S ribosomal protein L3 [Lodderomyces elongisporus NRRL YB-4239]
Length = 389
Score = 64.6 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 45/149 (30%), Gaps = 34/149 (22%)
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
V S F +++DV +T G GF G R L R G
Sbjct: 197 EHFEKEVSVDSVFEQNEMIDVIAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIG- 253
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV---------------------------- 182
P V AG+ G + T N +V V
Sbjct: 254 AWHPANVNWTVARAGQNGYHHRTSINHKVYRVGKGGDESNGATEFDRTKKTINPMGGFVR 313
Query: 183 --DDKRGLILVKGCVPGAKKNSWILVRDS 209
+ +L+KG +PG KK + +R S
Sbjct: 314 YGNVNNDFVLLKGSIPGVKKR-IVTLRKS 341
>gi|71652016|ref|XP_814673.1| ribosomal protein L3 [Trypanosoma cruzi strain CL Brener]
gi|71652018|ref|XP_814674.1| ribosomal protein L3 [Trypanosoma cruzi strain CL Brener]
gi|70879667|gb|EAN92822.1| ribosomal protein L3, putative [Trypanosoma cruzi]
gi|70879668|gb|EAN92823.1| ribosomal protein L3, putative [Trypanosoma cruzi]
Length = 428
Score = 64.6 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 48/306 (15%), Positives = 78/306 (25%), Gaps = 105/306 (34%)
Query: 5 VVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVV----------HRTLD-- 42
+ K GMT + + G ++ PVT+L VV H+T+
Sbjct: 46 FMVFKAGMTHIVRDVDRPGSKVNKKEVVEPVTILEAPPMVVVGIVGYRQTPVGHKTIGTV 105
Query: 43 --------------KNGYMAVQVGAGE----------------------AKVKNVSKPMR 66
KN + Q+ + K +
Sbjct: 106 WAHHTSVEFRRRFYKNWKQSAQLAFTKRKQFARTTEGRLAEARTLKAFAKKADIIRVVAH 165
Query: 67 GFFSSVNVSPKKKLFEFRVQ------------KDDDLLPVGSVFSPSYFTVGQLVDVTGM 114
+ + + + L V S F + DV +
Sbjct: 166 TQLRKLRNNRVGVKKAHVSEIQINGGTIAEKIELAKSLLEKEVRIDSIFQQSETCDVCAV 225
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
T G GF+G +KR L R G P RV AG+ G + T
Sbjct: 226 TKGHGFTGVVKRWGVACLP--RKTHRGLRKVACIG-AWHPARVMYTVARAGQHGYHHRTH 282
Query: 175 KNLEVVSV--------------------------------DDKRGLILVKGCVPGAKKNS 202
N ++ + + I++KG V G ++
Sbjct: 283 LNKKIYQLGRAVSMEPNQATTTYDLTAKSITPMGGFVGYGTVRNDYIMLKGSVAGPRRRV 342
Query: 203 WILVRD 208
L R
Sbjct: 343 ITLRRP 348
>gi|321263851|ref|XP_003196643.1| large subunit ribosomal protein L3 [Cryptococcus gattii WM276]
gi|317463120|gb|ADV24856.1| Large subunit ribosomal protein L3, putative [Cryptococcus gattii
WM276]
Length = 390
Score = 64.6 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 46/305 (15%), Positives = 76/305 (24%), Gaps = 100/305 (32%)
Query: 3 SGVVARKLGMTCV---YNIEGRRI-------PVTVLHLDNCQVVV--------------- 37
+ V+ K GMT + + G ++ VTV+ VV
Sbjct: 44 TAVMGYKAGMTHIVRDLDRPGSKMHKREVVEAVTVIETPPMVVVGAVGYVETPRGLRSLT 103
Query: 38 -----------HRTLDKNGYMAVQVGA-------------------GEAKVKNVSKPMRG 67
R KN Y + + K +
Sbjct: 104 TVWAEHLSDEVKRRFYKNWYRSKKKAFTRYAKKHSENSGASVARELERIKKYCTVVRVLA 163
Query: 68 FFSSVN---VSPKKKLFEFRVQKD--------DDLLPVGSVFSPSYFTVGQLVDVTGMTI 116
K L E +V +V S F + +D+ G+T
Sbjct: 164 HTQISKTGLQQKKAHLMEIQVNGGSVADKVDFARSHFEKTVEVGSVFEQDECIDIIGVTK 223
Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
G G+ G R L R G P V + AG+ G + T N
Sbjct: 224 GHGYEGVTARWGTTRLP--RKTHRGLRKVACIG-AWHPSNVMFSVARAGQRGYHSRTSMN 280
Query: 177 LEVVSV------------------------------DDKRGLILVKGCVPGAKKNSWILV 206
++ + K +++KG G K + +
Sbjct: 281 HKIYRIANGASGSSGSTEFDLTKKDITPMGGFVRYGVVKNDFVMIKGTCVGPVKR-IVTL 339
Query: 207 RDSFK 211
R + +
Sbjct: 340 RKALR 344
>gi|58260576|ref|XP_567698.1| large subunit ribosomal protein L3 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134117057|ref|XP_772755.1| hypothetical protein CNBK1290 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255373|gb|EAL18108.1| hypothetical protein CNBK1290 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229779|gb|AAW46181.1| large subunit ribosomal protein L3, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 390
Score = 64.6 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 46/305 (15%), Positives = 76/305 (24%), Gaps = 100/305 (32%)
Query: 3 SGVVARKLGMTCV---YNIEGRRI-------PVTVLHLDNCQVVV--------------- 37
+ V+ K GMT + + G ++ VTV+ VV
Sbjct: 44 TAVMGYKAGMTHIVRDLDRPGSKMHKREVVEAVTVIETPPMVVVGAVGYVETPRGLRSLT 103
Query: 38 -----------HRTLDKNGYMAVQVGA-------------------GEAKVKNVSKPMRG 67
R KN Y + + K +
Sbjct: 104 TVWAEHLSDEVKRRFYKNWYRSKKKAFTRYAKKHSENSGASVARELERIKKYCTVVRVLA 163
Query: 68 FFSSVN---VSPKKKLFEFRVQKD--------DDLLPVGSVFSPSYFTVGQLVDVTGMTI 116
K L E +V +V S F + +D+ G+T
Sbjct: 164 HTQISKTGLQQKKAHLMEIQVNGGSVADKVDFARSHFEKTVDVGSVFEQDECIDIIGVTK 223
Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
G G+ G R L R G P V + AG+ G + T N
Sbjct: 224 GHGYEGVTARWGTTRLP--RKTHRGLRKVACIG-AWHPSNVMFSVARAGQRGYHSRTSMN 280
Query: 177 LEVVSV------------------------------DDKRGLILVKGCVPGAKKNSWILV 206
++ + K +++KG G K + +
Sbjct: 281 HKIYRIANGASGSSGSTEFDLTKKDITPMGGFVRYGVVKNDFVMIKGTCVGPVKR-IVTL 339
Query: 207 RDSFK 211
R + +
Sbjct: 340 RKALR 344
>gi|156065829|ref|XP_001598836.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|154691784|gb|EDN91522.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 392
Score = 64.6 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 52/300 (17%), Positives = 74/300 (24%), Gaps = 100/300 (33%)
Query: 6 VARKLGMTCV---YNIEGRRI-------PVTVLHLDNCQVVV------------------ 37
+ K GMT + + G + VTV+ VV
Sbjct: 47 LGYKAGMTTIVRDLDRPGAKTHKKEVVEAVTVIETPPVIVVGLVGYIETPRGLRSLTTVW 106
Query: 38 --------HRTLDKNGYMAVQVGA-------------------GEAKVKNVSKPMRGFFS 70
R KN Y + + K +
Sbjct: 107 AEHLSDEVKRRFYKNWYKSKKKAFTKYAKKHSENSGSSITRELERIKKYCTVVRVLAHTQ 166
Query: 71 SVNVSPKKKLFEFR-----------VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
K+K L V S F +++DV +T G G
Sbjct: 167 IRKTPLKQKKAHLMEIQVNGGSVAEKVDFASGLFEKPVEIGSIFEQDEMIDVIAVTKGHG 226
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
FSG R L R G P V AG+ G + T N +V
Sbjct: 227 FSGVTSRWGTKKLP--RKTHKGLRKVACIG-AWHPAHVQWTVARAGQDGYHHRTSCNHKV 283
Query: 180 VSV------------------------------DDKRGLILVKGCVPGAKKNSWILVRDS 209
+ + K I++KG VPG KK + +R S
Sbjct: 284 YRIGRGDDPNNAATEFDVSKKAITPMGGFVRYGEVKNDYIMLKGSVPGVKKR-VMTLRKS 342
>gi|115383888|ref|XP_001208491.1| 60S ribosomal protein L3 [Aspergillus terreus NIH2624]
gi|114196183|gb|EAU37883.1| 60S ribosomal protein L3 [Aspergillus terreus NIH2624]
Length = 395
Score = 64.6 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 48/148 (32%), Gaps = 34/148 (22%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
S F +++DV +T G GF G R L R G P V
Sbjct: 211 SIFEKDEMIDVIAVTKGHGFQGVTSRWGTKKLP--RKTHKGLRKVACIG-AWHPNHVQWT 267
Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
AG+MG + T N +V + + K ++
Sbjct: 268 VARAGQMGYHHRTSCNHKVFRIGKGSDEGNASTDFDVSKKQITPMGGFVHYGEVKNDYVM 327
Query: 191 VKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+KG +PG KK + +R + N +
Sbjct: 328 LKGSIPGVKKR-VMTLRKTLYPQTNRRA 354
>gi|253747835|gb|EET02309.1| Ribosomal protein L3 [Giardia intestinalis ATCC 50581]
Length = 379
Score = 64.6 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/135 (21%), Positives = 43/135 (31%), Gaps = 33/135 (24%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
F VG+ +D +T G+GF G + R L +R G P V
Sbjct: 207 DVFEVGKQIDTISITRGRGFEGVVTRWGVTRLP--RKTRRGNRKVACIG-SWHPANVQYT 263
Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKRG------------------------------LIL 190
AG+MG T N +V +D I+
Sbjct: 264 VARAGQMGYFHRTDTNKQVFMIDTAENPRCCTTEFDLTDKSINPVGGFVNYGRIQGDFIM 323
Query: 191 VKGCVPGAKKNSWIL 205
+KG PG K+ ++
Sbjct: 324 IKGTCPGPKRRPVVM 338
>gi|224070234|ref|XP_002187558.1| PREDICTED: similar to MGC108366 protein [Taeniopygia guttata]
Length = 380
Score = 64.6 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 36/200 (18%), Positives = 61/200 (30%), Gaps = 25/200 (12%)
Query: 3 SGVVARKLGMTCV----------YNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
+ + K GMT + VT++ VV +
Sbjct: 66 TAFLGYKAGMTHTVREVHRPGLKISKREEVEAVTIIETPPMVVVGVVGYIETPKGLR--N 123
Query: 53 AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVG----------SVFSPSY 102
+++S R F KKK +Q + + + S
Sbjct: 124 FKTVFAEHISDECRRRFYKNWHKSKKKAHIMEIQLNGGTVAEKVDWVRERLEKQISVHSV 183
Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
F+ +++DV G+T G G G R + L R G P RV +
Sbjct: 184 FSQNEMIDVIGVTKGHGMKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPARVGYSIA 240
Query: 163 MAGRMGGNRVTVKNLEVVSV 182
AG+ G + T N ++ +
Sbjct: 241 RAGQKGYHHRTEINKKIYRI 260
>gi|145527660|ref|XP_001449630.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124417218|emb|CAK82233.1| unnamed protein product [Paramecium tetraurelia]
Length = 393
Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 47/310 (15%), Positives = 80/310 (25%), Gaps = 98/310 (31%)
Query: 3 SGVVARKLGMTCVYNI--------EGRRI--PVTVLHLDNCQVVVHRT--LDKNGYMAVQ 50
+ K GMT + G + VT++ VV G A+
Sbjct: 44 TAFAGFKAGMTHILRTVERPGSKLNGNVVVEAVTIVETPPLVVVGIVGYIETPRGLRALT 103
Query: 51 VGAGEAKVKNVSKPMRGF-----------FSSVNVSPKK--------------------- 78
K+ + ++ N PK
Sbjct: 104 TVWSTKIAKDTLRRFYKNWINSKKKAFTNYNKANAEPKNLETQLKRIVKYCQVVRVIVHT 163
Query: 79 --------------------KLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
+ L V F + +DV G+T GK
Sbjct: 164 QMSKLNLRQKKNHVFEVQVNGGNTEQKVNFAKGLLEKEVKVDQVFNQNEQIDVLGVTKGK 223
Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
G +G +KR L+ R G G P V + G++G + T N +
Sbjct: 224 GVAGVIKRFGVKHLQK--KTHRGWRRVGCIG-GWHPANVRYSVARTGQLGYHHRTEMNKK 280
Query: 179 VVSV------------------------------DDKRGLILVKGCVPGAKKNSWILVRD 208
+ + + + +++KG + G KK +L+R
Sbjct: 281 IYRIGAAGDKNTASTEADLTSKAITPLGGFPHYGEIRNDFLMLKGGIVGPKKR-VVLLRK 339
Query: 209 SFKSAVNCKG 218
S + K
Sbjct: 340 SLVPQTSRKA 349
>gi|154301761|ref|XP_001551292.1| 60S ribosomal protein L3 [Botryotinia fuckeliana B05.10]
gi|150855694|gb|EDN30886.1| 60S ribosomal protein L3 [Botryotinia fuckeliana B05.10]
Length = 392
Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 52/300 (17%), Positives = 74/300 (24%), Gaps = 100/300 (33%)
Query: 6 VARKLGMTCV---YNIEGRRI-------PVTVLHLDNCQVVV------------------ 37
+ K GMT + + G + VTV+ VV
Sbjct: 47 LGYKAGMTTIVRDLDRPGAKTHKKEVVEAVTVIETPPVIVVGLVGYIETPRGLRSLTTVW 106
Query: 38 --------HRTLDKNGYMAVQVGA-------------------GEAKVKNVSKPMRGFFS 70
R KN Y + + K +
Sbjct: 107 AEHLSDEVKRRFYKNWYKSKKKAFTKYAKKHSENSGSSITRELERIKKYCTVVRVLAHTQ 166
Query: 71 SVNVSPKKKLFEFR-----------VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKG 119
K+K L V S F +++DV +T G G
Sbjct: 167 IRKTPLKQKKAHLMEIQVNGGSVAEKVDFASGLFEKPVEISSIFEQDEMIDVIAVTKGHG 226
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
FSG R L R G P V AG+ G + T N +V
Sbjct: 227 FSGVTSRWGTKKLP--RKTHKGLRKVACIG-AWHPAHVQWTVARAGQDGYHHRTSCNHKV 283
Query: 180 VSV------------------------------DDKRGLILVKGCVPGAKKNSWILVRDS 209
+ + K I++KG VPG KK + +R S
Sbjct: 284 YRIGRGDDPNNAATEFDVSKKAITPMGGFVRYGEVKNDFIMLKGSVPGVKKR-VMTLRKS 342
>gi|119190755|ref|XP_001245984.1| hypothetical protein CIMG_05425 [Coccidioides immitis RS]
gi|303315241|ref|XP_003067628.1| 60S ribosomal protein L3, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240107298|gb|EER25483.1| 60S ribosomal protein L3, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320035569|gb|EFW17510.1| 60S ribosomal protein L3 [Coccidioides posadasii str. Silveira]
Length = 392
Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/148 (20%), Positives = 47/148 (31%), Gaps = 34/148 (22%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
S F +++DV +T G GF G R L R G P V
Sbjct: 208 SVFEQDEMIDVIAVTKGHGFQGVTSRWGTKKLP--RKTHKGLRKVACIG-AWHPSHVQWT 264
Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
AG+ G + T N ++ + + K I+
Sbjct: 265 VARAGQDGYHHRTSVNHKIYRIGKGSDEGNASTDFDVSKKQITPMGGFVRYGEVKNDFII 324
Query: 191 VKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+KG PG KK + +R + V+ K
Sbjct: 325 LKGSCPGVKKR-VLTLRKTLFPQVSRKA 351
>gi|291223744|ref|XP_002731867.1| PREDICTED: ribosomal protein L3-like [Saccoglossus kowalevskii]
Length = 404
Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 55/320 (17%), Positives = 85/320 (26%), Gaps = 108/320 (33%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ V K GMT + + G ++ PVT++ VV
Sbjct: 44 TAFVGYKAGMTHIVRQVDRPGSKVNKKEVVEPVTIIETPPLMVVGVVGYIDTPRGQRTLK 103
Query: 39 ------------RTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQ 86
R KN Y A + +A K + + KK R+
Sbjct: 104 TIWAEHLNEECRRRFYKNWYRAKKKAFTKASKKWGDDGGKQAIEKDFNAMKKYCKVIRIL 163
Query: 87 KDDDLLPVGSVFSPSYFTVGQ-------------------------------LVDVTGMT 115
+ + ++ Q ++DV G+T
Sbjct: 164 AHTQMRLMNQRQKKAHIIEIQINGGTIAEKVDWAREKLESQIPVTQVFVQDEMIDVIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKGF G R L R G P RV AG+ G + T
Sbjct: 224 KGKGFKGVTSRWGTKKLP--RKTHKGLRKVACIG-AWHPARVGYGVARAGQKGYHHRTEL 280
Query: 176 NLEVVSV-------------------------------------DDKRGLILVKGCVPGA 198
N +V + K +++KGCV G
Sbjct: 281 NKKVYRIGAGIHTKDGKVIKNNAATEYDQTDKDITPLGGFPHYGVVKNDFLMLKGCVIGP 340
Query: 199 KKNSWILVRDSFKSAVNCKG 218
KK + +R S + + K
Sbjct: 341 KKR-VLTLRKSLLTQTSRKA 359
>gi|42559687|sp|Q9AIN8|RL3_CARRU RecName: Full=50S ribosomal protein L3
gi|13310845|gb|AAK18637.1|AF250389_3 ribosomal protein L3 [Candidatus Carsonella ruddii]
Length = 136
Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 42/95 (44%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Query: 111 VTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGN 170
+ + GKGF G +KR NF +HG S+S+R+ GSTG QDPGRVFK KKM GRMG
Sbjct: 42 LICYSKGKGFQGVVKRWNFKTKDKSHGNSLSYRTLGSTGQCQDPGRVFKKKKMPGRMGNK 101
Query: 171 RVTVKNLEVVSVDDKRGLILVKGCVPGAKKNSWIL 205
+ +L V K+ +K +PG KN +L
Sbjct: 102 K---FSLFVNIFFRKKNYFFLKKILPG-VKNDILL 132
>gi|322705242|gb|EFY96829.1| 60S ribosomal protein L3 [Metarhizium anisopliae ARSEF 23]
Length = 391
Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 50/303 (16%), Positives = 75/303 (24%), Gaps = 100/303 (33%)
Query: 3 SGVVARKLGMTCVY----------NIEGRRIPVTVLHLDNCQVVV--------------- 37
+ + K GMT + N + VTV+ VV
Sbjct: 44 TAAMGYKAGMTTIVRDLDRPGAKANKKEVVEAVTVVDTPPMIVVGLVGYIETPRGLRSLT 103
Query: 38 -----------HRTLDKNGYMAVQVGA-------------------GEAKVKNVSKPMRG 67
R KN Y + + K +
Sbjct: 104 TVWAEHLSDEVKRRFYKNWYKSKKKAFTKYAKKHSESSGASITRELERIKKYCTVVRVLA 163
Query: 68 FFSSVNVSPKKKLFEFR-----------VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTI 116
K+K L V + F +++DV +T
Sbjct: 164 HTQIRKTPLKQKKAHLMEIQINGGSVADKVSFGQDLFEKPVSIDTIFEQDEMIDVIAVTK 223
Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
G GF+G R L R G P V AG+MG + T N
Sbjct: 224 GHGFNGVTARWGTKKLP--RKTHKGLRKVACIG-AWHPSHVQWTVARAGQMGYHHRTSVN 280
Query: 177 LEVVSV---DDK---------------------------RGLILVKGCVPGAKKNSWILV 206
+V + D + ++VKG +PG KK + +
Sbjct: 281 HKVYRIGKGDAEDSASTEIDVTKKKITPLGGFVRYGEVNNDFVMVKGSIPGVKKR-VMTL 339
Query: 207 RDS 209
R S
Sbjct: 340 RKS 342
>gi|145608344|ref|XP_360650.2| large subunit ribosomal protein L3 [Magnaporthe oryzae 70-15]
gi|145015825|gb|EDK00315.1| large subunit ribosomal protein L3 [Magnaporthe oryzae 70-15]
Length = 392
Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 46/138 (33%), Gaps = 34/138 (24%)
Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
F +++D+ +T G GF+G R L R G P V
Sbjct: 209 IFEQNEMIDIIAVTKGHGFNGVTSRWGTKKLP--RKTHKGLRKVACIG-AWHPSHVQWTV 265
Query: 162 KMAGRMGGNRVTVKNLEVVSV---DDKRG---------------------------LILV 191
AG+MG + T N +V + D + ++V
Sbjct: 266 ARAGQMGYHHRTSVNHKVYRIGKGDAEDNAATEIDVTKKKITPMGGFVRYGEINNDFVMV 325
Query: 192 KGCVPGAKKNSWILVRDS 209
KG +PG KK + +R S
Sbjct: 326 KGSIPGTKKR-VMTLRKS 342
>gi|170111497|ref|XP_001886952.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164637995|gb|EDR02275.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 388
Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 30/138 (21%), Positives = 44/138 (31%), Gaps = 34/138 (24%)
Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
F + VDV +T G GF G R L R G P +V +
Sbjct: 209 VFEQDECVDVIAVTKGHGFEGVTHRWGTKKLP--RKTHKGLRKVACIG-AWHPSKVMFSV 265
Query: 162 KMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLILV 191
AG+ G + T N ++ + K +++
Sbjct: 266 ARAGQNGYHHRTELNKKIYRIGSGTDEANASTESDITNKSITPMGGFPHYGIVKNDFLML 325
Query: 192 KGCVPGAKKNSWILVRDS 209
KG +PG KK I +R S
Sbjct: 326 KGSIPGTKKR-VITIRKS 342
>gi|241952212|ref|XP_002418828.1| ribosomal protein, large subunit, putative [Candida dubliniensis
CD36]
gi|223642167|emb|CAX44134.1| ribosomal protein, large subunit, putative [Candida dubliniensis
CD36]
Length = 389
Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 45/149 (30%), Gaps = 34/149 (22%)
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
V S F +++DV +T G GF G R L R G
Sbjct: 197 EHFEKEVSVDSVFEQDEMIDVIAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIG- 253
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV---------------------------- 182
P V AG+ G + T N +V V
Sbjct: 254 AWHPANVNWTVARAGQNGYHHRTSINHKVYRVGKGSDEANGATEFDRTKKTINPMGGFVR 313
Query: 183 --DDKRGLILVKGCVPGAKKNSWILVRDS 209
+ +L+KG +PG KK + +R S
Sbjct: 314 YGNVNNDFVLLKGSIPGVKKR-VVTLRKS 341
>gi|170578047|ref|XP_001894243.1| 60S ribosomal protein L3 [Brugia malayi]
gi|158599245|gb|EDP36917.1| 60S ribosomal protein L3, putative [Brugia malayi]
Length = 430
Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/247 (16%), Positives = 67/247 (27%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ VTVL +V
Sbjct: 78 TAFMGFKAGMTHIVREVDKPGSKVNKKEVVEAVTVLETPPMIIVGVVGYIDTPRGPRQFK 137
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ D++G ++Q + K +
Sbjct: 138 TVWAEHLSEDCRRRFYKNWNSSKKKAFQKHAKKWQDEDGMKSIQADLAKMKKYCSIIRVI 197
Query: 67 GFFSSV---NVSPKKKLFEFRVQKD--------DDLLPVGSVFSPSYFTVGQLVDVTGMT 115
+ K + E +V V S F +++D G+T
Sbjct: 198 AHTQMKVMKHREKKAHIMEIQVNGGTVPEKVDWAYEHFEKQVPVDSVFAQDEMIDTIGVT 257
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKGF G R + L R G P RV AG+ G + T
Sbjct: 258 KGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVQFTVARAGQKGYHHRTEV 314
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 315 NKKIYRI 321
>gi|145232153|ref|XP_001399531.1| 60S ribosomal protein L3 [Aspergillus niger CBS 513.88]
gi|134056442|emb|CAL00609.1| unnamed protein product [Aspergillus niger]
Length = 392
Score = 64.2 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 42/131 (32%), Gaps = 33/131 (25%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
S F +++DV +T G GF G R L R G P V
Sbjct: 208 SIFEKDEMIDVIAVTKGHGFQGVTSRWGTKKLP--RKTHKGLRKVACIG-AWHPNHVQWT 264
Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
AG+MG + T N +V V + K +L
Sbjct: 265 VARAGQMGYHHRTSCNHKVFRVGKGSDEGNASTDFDISKKQITPMGGFVHYGEVKNDFVL 324
Query: 191 VKGCVPGAKKN 201
+KG VPG KK
Sbjct: 325 LKGSVPGVKKR 335
>gi|68491020|ref|XP_710682.1| likely cytosolic ribosomal protein L3 [Candida albicans SC5314]
gi|68491039|ref|XP_710673.1| likely cytosolic ribosomal protein L3 [Candida albicans SC5314]
gi|46431906|gb|EAK91425.1| likely cytosolic ribosomal protein L3 [Candida albicans SC5314]
gi|46431916|gb|EAK91434.1| likely cytosolic ribosomal protein L3 [Candida albicans SC5314]
gi|238883805|gb|EEQ47443.1| 60S ribosomal protein L3 [Candida albicans WO-1]
Length = 389
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 45/149 (30%), Gaps = 34/149 (22%)
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
V S F +++DV +T G GF G R L R G
Sbjct: 197 EHFEKEVSVDSVFEQDEMIDVIAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIG- 253
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV---------------------------- 182
P V AG+ G + T N +V V
Sbjct: 254 AWHPANVNWTVARAGQNGYHHRTSINHKVYRVGKGTDEANGATEFDRTKKTINPMGGFVR 313
Query: 183 --DDKRGLILVKGCVPGAKKNSWILVRDS 209
+ +L+KG +PG KK + +R S
Sbjct: 314 YGNVNNDFVLLKGSIPGVKKR-VVTLRKS 341
>gi|310794485|gb|EFQ29946.1| ribosomal protein L3 [Glomerella graminicola M1.001]
Length = 391
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 47/139 (33%), Gaps = 34/139 (24%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
S F +++DV +T G G++G R L R G P V
Sbjct: 208 SIFEQNEMIDVIAVTTGHGYNGVTSRWGTKKLP--RKTHKGLRKVACIG-AWHPSHVQWT 264
Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
AG+MG + T N +V + + K ++
Sbjct: 265 VARAGQMGYHHRTSVNHKVYRIGKGDADDNASTDVDVTKKTITPLGGFVRYGEVKNDFVM 324
Query: 191 VKGCVPGAKKNSWILVRDS 209
VKG +PG KK + +R S
Sbjct: 325 VKGSIPGTKKR-VMTLRKS 342
>gi|303273052|ref|XP_003055887.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461971|gb|EEH59263.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 387
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/304 (15%), Positives = 81/304 (26%), Gaps = 101/304 (33%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH----RTLD------ 42
+ + K GMT + + G ++ VT++ VV +T
Sbjct: 44 TAFLGFKAGMTHIVRDVDKPGSKLHKKETLEAVTIVETPAMIVVGVVGYVKTPQGLRALN 103
Query: 43 ----------------KNGYMAVQVGAGEAKVKNVS----------------------KP 64
KN Y + + + + K +
Sbjct: 104 TVWAEHLSVEIKRRFYKNWYKSKRKAFTKYEKKYANGSGAIDQELDALKKNADVVRVIAH 163
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKD--------DDLLPVGSVFSPSYFTVGQLVDVTGMTI 116
+ K + E +V +V + F +++D +T
Sbjct: 164 TQVRKVKNLKQKKAHMMEIQVNGGSVADKVDFAYKFFEKAVPVDAVFAKDEMIDCISVTK 223
Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
GKGF G + R L R G G P RV G+ G + T N
Sbjct: 224 GKGFEGVVTRWGVTRLP--RKTHRGLRKVGCIG-AWHPARVGYTVARPGQHGYHHRTEIN 280
Query: 177 LEVVSVDDK-------------------------------RGLILVKGCVPGAKKNSWIL 205
++ V + +++KG + G +K I
Sbjct: 281 KKIYRVGKEGDSSHKASTDHDATEKDITPMGGFPHYGIVRNDYLMIKGGIAGPRKR-LIT 339
Query: 206 VRDS 209
+R S
Sbjct: 340 LRRS 343
>gi|308490853|ref|XP_003107618.1| CRE-RPL-3 protein [Caenorhabditis remanei]
gi|308250487|gb|EFO94439.1| CRE-RPL-3 protein [Caenorhabditis remanei]
Length = 401
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/308 (13%), Positives = 80/308 (25%), Gaps = 105/308 (34%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ V+++ +
Sbjct: 44 TAFLGYKAGMTHIVRDVDKPGSKVNKKEVVEAVSIIETPPMVIAGVTGYIDTPQGPRALT 103
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ D++G ++ + K S +
Sbjct: 104 TIWAEHLSEEARRRFYSNWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVI 163
Query: 67 GFF----------SSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMT 115
+ V + + D + F+ +++D G+T
Sbjct: 164 AHTQMKILRRRQKKAHLVEIQVNGGTIEQKVDWAREHLEKQIQVDTVFSQDEMIDTIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
G GF G R + L R G P RV AG+ G + T+
Sbjct: 224 KGHGFKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVAFTVARAGQKGFHHRTII 280
Query: 176 NLEVVSV-------DDKRG---------------------------LILVKGCVPGAKKN 201
N ++ + + K I+++G + G KK
Sbjct: 281 NNKIYKIGKSALTEEGKNNGSTEFDLTQKTINPMGGFPRYGIVNQDYIMLRGAILGPKKR 340
Query: 202 SWILVRDS 209
I +R S
Sbjct: 341 -LITLRKS 347
>gi|302915465|ref|XP_003051543.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732482|gb|EEU45830.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 391
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 43/131 (32%), Gaps = 33/131 (25%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
S F +++DV +T G GF+G R L R G P V
Sbjct: 208 SIFEQDEMIDVIAVTKGHGFNGVTARWGTKKLP--RKTHKGLRKVACIG-AWHPSHVQWT 264
Query: 161 KKMAGRMGGNRVTVKNLEVVSV---DDKRG---------------------------LIL 190
AG+MG + T N ++ + D + ++
Sbjct: 265 VARAGQMGYHHRTSVNHKIYRIGKGDAEDNAATEIDVTKKTITPLGGFVRYGEVKNDFVM 324
Query: 191 VKGCVPGAKKN 201
+KG +PG KK
Sbjct: 325 LKGSIPGVKKR 335
>gi|330907574|ref|XP_003295853.1| hypothetical protein PTT_03505 [Pyrenophora teres f. teres 0-1]
gi|311332456|gb|EFQ96051.1| hypothetical protein PTT_03505 [Pyrenophora teres f. teres 0-1]
Length = 392
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 46/139 (33%), Gaps = 34/139 (24%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
S F +++DV +T G G++G R L R G P V
Sbjct: 208 SIFEANEMIDVIAVTKGHGYNGVTSRWGTKKLP--RKTHKGLRKVACIG-AWHPAHVQWT 264
Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
AG+MG + T N ++ + + K +L
Sbjct: 265 VARAGQMGYHHRTSVNHKIYRIGKADDEGNASTEFDVSKKRITPMGGFVRYGEVKNDFVL 324
Query: 191 VKGCVPGAKKNSWILVRDS 209
+KG PG KK + +R S
Sbjct: 325 LKGNCPGVKKR-VVTLRKS 342
>gi|310771890|emb|CBH28886.1| 60S RIBOSOMAL PROTEIN L3 [Anncaliia algerae]
Length = 381
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 50/306 (16%), Positives = 88/306 (28%), Gaps = 95/306 (31%)
Query: 3 SGVVARKLGMTCV----YNIEGRRI------PVTVLHLDNCQV------------VVHRT 40
+G K GMT + + + VTVL V + +T
Sbjct: 44 TGFYVYKAGMTHIVRNKIMKDKKSTVKEILEAVTVLEAPPMVVFGIQGYVNTSEGLKLKT 103
Query: 41 ------------------------------------LDKNGYMAVQVGAGEAKVKNVSKP 64
+ + +A+ +V ++
Sbjct: 104 TLISSHVNQSVIRRFLKNFYTSSRKDMGSITKAITKEETDEKIAILKECDSIRVMMHTQI 163
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVF-----SPSYFTVGQLVDVTGMTIGKG 119
R + ++ D + S+ F L+DV G+T GKG
Sbjct: 164 DRIKQIKTKKAHISEIQVNGGSVADKVEWAVSMLEKEVKVTDVFGENDLIDVIGVTKGKG 223
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
F+G KR L + R G P V + AG++G +R T N V
Sbjct: 224 FNGVTKRFGTKILP--RKTNKGKRKVACIG-AWHPANVLYSVPRAGQLGFHRRTEYNKMV 280
Query: 180 VS-------VDDKRGL---------------------ILVKGCVPGAKKNSWILVRDSFK 211
+ + L I++KG PG +K + +R + +
Sbjct: 281 YKLGNGKQSIKTEYDLTEKTVNPMGGFPHYGCVSNDFIMIKGSCPGPRKR-VLALRKNLR 339
Query: 212 SAVNCK 217
+ V+ +
Sbjct: 340 NKVSTE 345
>gi|160331207|ref|XP_001712311.1| rpl3 [Hemiselmis andersenii]
gi|159765758|gb|ABW97986.1| rpl3 [Hemiselmis andersenii]
Length = 388
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 36/153 (23%), Positives = 53/153 (34%), Gaps = 34/153 (22%)
Query: 87 KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHG 146
+ + + F +++D G+T GKGF G +KR L R
Sbjct: 198 NFVEKISQKEISISDIFRQREIIDTIGITKGKGFQGVIKRWGVTKLP--RKTHRGARKVA 255
Query: 147 STGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------------------------ 182
G P RV AG+ G + T NL++ V
Sbjct: 256 CVG-SWHPSRVSFRVPRAGQTGFHHRTQINLQIYRVGKALDSNNGSTEFDLSTKKITPMG 314
Query: 183 ------DDKRGLILVKGCVPGAKKNSWILVRDS 209
+ K +L+KGCV G+KK I +R S
Sbjct: 315 GFPYYGNVKEDFLLLKGCVMGSKKRQ-ITLRKS 346
>gi|66566113|ref|XP_624821.1| PREDICTED: 60S ribosomal protein L3 [Apis mellifera]
Length = 415
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 52/311 (16%), Positives = 79/311 (25%), Gaps = 108/311 (34%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT V + G ++ VT+L VV
Sbjct: 44 TAFIGYKAGMTHVVREADRPGSKVNKKEIVEAVTILETPPMIVVGVVGYIETPHGLRALT 103
Query: 39 ------------RTLDKNGYMAVQVGAGEAKVKNVSK----PMRGFFSSVNVSPKKKLFE 82
R KN Y + + +A K + F + K
Sbjct: 104 TVWAEHLSEDCRRRFYKNWYKSKKKAFTKASKKWQDDLGRKSIENDFKKIIKYCKVVRII 163
Query: 83 FRVQKD---------------------------DDLLPVGSVFSPSYFTVGQLVDVTGMT 115
Q V + F +++DV G+T
Sbjct: 164 AHTQMKLLRQRQKKAHIMEIQLNGGTIEQKVQWAREHLEKPVPVSNVFAPDEMIDVIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV AG+ G + T
Sbjct: 224 KGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVSFTVARAGQKGYHHRTEM 280
Query: 176 NLEVVSV-------------------------------------DDKRGLILVKGCVPGA 198
N ++ + + I++KGC G
Sbjct: 281 NKKIYRIGQGIHTKDGKIVKNNASTEYDLTEKTITPMGGFPHYGEVNNDFIMIKGCCMGP 340
Query: 199 KKNSWILVRDS 209
KK I +R S
Sbjct: 341 KKR-VITLRKS 350
>gi|268564071|ref|XP_002647082.1| C. briggsae CBR-RPL-3 protein [Caenorhabditis briggsae]
gi|60393717|sp|Q9NBK4|RL3_CAEBR RecName: Full=60S ribosomal protein L3
gi|187036492|emb|CAP24473.1| CBR-RPL-3 protein [Caenorhabditis briggsae AF16]
Length = 401
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/308 (12%), Positives = 80/308 (25%), Gaps = 105/308 (34%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ V+++ +
Sbjct: 44 TAFLGYKAGMTHIVRDVDKPGSKVNKKEVVEAVSIIETPPMVIAGVTGYIDTPQGPRALT 103
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ D++G ++ + K S +
Sbjct: 104 TIWAEHLSEEARRRFYSNWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVI 163
Query: 67 GFF----------SSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMT 115
+ V + + D + F+ +++D G+T
Sbjct: 164 AHTQMKILRRRQKKAHLVEIQINGGTIEQKVDWAREHLEKQIQVDTVFSQDEMIDTIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
G GF G R + L R G P RV AG+ G + T+
Sbjct: 224 KGHGFKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVAFTVARAGQKGFHHRTII 280
Query: 176 NLEVVSV-------DDKRG---------------------------LILVKGCVPGAKKN 201
N ++ + + K ++++G + G KK
Sbjct: 281 NNKIYRIGKSALTEEGKNNGSTEFDLTQKTINPMGGFPRYGLVNQDYVMLRGAILGPKKR 340
Query: 202 SWILVRDS 209
I +R S
Sbjct: 341 -LITLRKS 347
>gi|255717332|ref|XP_002554947.1| KLTH0F17556p [Lachancea thermotolerans]
gi|238936330|emb|CAR24510.1| KLTH0F17556p [Lachancea thermotolerans]
Length = 388
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 33/158 (20%), Positives = 50/158 (31%), Gaps = 34/158 (21%)
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
+V S F +++DV +T G GF G R L R G
Sbjct: 197 EHFEKTVSVDSVFEQNEMIDVCAVTKGHGFEGVTHRWGTKKLP--RKTHRGLRKVACIG- 253
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD--------------------------- 183
P V + AG+ G + T N +V V
Sbjct: 254 AWHPAHVMWSVARAGQRGFHTRTSINHKVYRVGKGGDEGNASTEFDRTKKSITPMGGFVQ 313
Query: 184 ---DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
++VKGC+PG +K + +R S + + K
Sbjct: 314 YGPVNNDFVMVKGCIPGNRKR-VVTLRKSLYTNTSRKA 350
>gi|114682524|ref|XP_001150138.1| PREDICTED: similar to ribosomal protein L3 [Pan troglodytes]
Length = 458
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/247 (13%), Positives = 65/247 (26%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ VT++ VV
Sbjct: 107 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFK 166
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ D++G ++ K +
Sbjct: 167 TVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIHVI 226
Query: 67 GFF----------SSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP-SYFTVGQLVDVTGMT 115
+ + + + D + F +++DV G+T
Sbjct: 227 AHTQMRLLPLRQKKAHLMEIQVNGGTVAKKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 286
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV + AG+ G + T
Sbjct: 287 KGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAFSVARAGQKGYHHRTEI 343
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 344 NKKIYKI 350
>gi|301093682|ref|XP_002997686.1| 60S ribosomal protein L3 [Phytophthora infestans T30-4]
gi|262109935|gb|EEY67987.1| 60S ribosomal protein L3 [Phytophthora infestans T30-4]
Length = 389
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 48/302 (15%), Positives = 81/302 (26%), Gaps = 99/302 (32%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ PV+++ V+
Sbjct: 44 TAFMGFKAGMTHIVREVDRPGSKVHKKEIVEPVSIVETPPMVVIGVVGYLETPRGLRTLT 103
Query: 39 ------------RTLDKNGYMAVQVGAGEAKVKNVSKPM--------------------R 66
R KN Y + + + K + P
Sbjct: 104 TVFAEHLSEEVKRRFYKNWYKSKRKAFTKYAKKYQTAPADIENELNRIKKYCQVVRVLAH 163
Query: 67 GFFSSVNVSPKKKLFEFRVQKDDD---------LLPVGSVFSPSYFTVGQLVDVTGMTIG 117
V + KK L V + F +++DV G+T G
Sbjct: 164 TQVRKVKLRQKKAHLLEVQVNGGSVADKVDFAKSLFEKQVPVTAVFAKDEMIDVIGVTKG 223
Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
G G + R L R G P RV AG+ G + T N
Sbjct: 224 HGVEGVITRWGVTRLP--RKTHRGLRKVACIG-AWHPSRVRFTVPRAGQHGYHHRTEINK 280
Query: 178 EVVSV---------DDKRGL---------------------ILVKGCVPGAKKNSWILVR 207
++ V ++ L +++KG + G KK + +R
Sbjct: 281 KIYRVGAAGDKKSCMTEQDLTEKDITPLGGFPHYGVINEDWLMIKGAIVGTKKRAL-TLR 339
Query: 208 DS 209
S
Sbjct: 340 KS 341
>gi|328852642|gb|EGG01786.1| hypothetical protein MELLADRAFT_45021 [Melampsora larici-populina
98AG31]
Length = 388
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 47/303 (15%), Positives = 74/303 (24%), Gaps = 100/303 (33%)
Query: 3 SGVVARKLGMTCVYNI---EGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ ++ K GMT + G ++ VT++ +V
Sbjct: 44 TAMLGYKAGMTHIVRELERPGSKMHKREVVEAVTIIETPPMVIVGVVGYVETPRGLRSLT 103
Query: 39 ------------RTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRV- 85
R KN Y + + + K+ + K +
Sbjct: 104 TVWAEHLSDEVKRRFYKNWYRSKKKAFTKYAKKHAESSTGSIARELERIRKYCTVVRVLA 163
Query: 86 -----------------------------QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTI 116
+ S F + +DV +T
Sbjct: 164 HTQIRKTGLKQKKAHLMEIQVNGGSVADKVDFAKSHFEKTFDVSSIFEQDENIDVIAVTK 223
Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
GKGF G R L R G P +V AG+ G + T N
Sbjct: 224 GKGFEGVTHRWGTKKLP--RKTHKGLRKVACIG-AWHPSKVMFTVARAGQNGYHHRTELN 280
Query: 177 LEVVSV------------------------------DDKRGLILVKGCVPGAKKNSWILV 206
+V V +++KG VPG KK I +
Sbjct: 281 KKVFRVGKGGDEANATTEFDTTKKAITPMGGFVRYGVVNNDFLMLKGSVPGVKKR-VITL 339
Query: 207 RDS 209
R S
Sbjct: 340 RKS 342
>gi|308160270|gb|EFO62765.1| Ribosomal protein L3 [Giardia lamblia P15]
Length = 379
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 47/146 (32%), Gaps = 34/146 (23%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
F+VG +D +T G+GF G + R L +R G P V
Sbjct: 207 DVFSVGAQIDTISITRGRGFEGVVTRWGVTRLP--RKTRRGNRKVACIG-AWHPANVQYT 263
Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKRG------------------------------LIL 190
AG+MG T N +V +D I+
Sbjct: 264 VARAGQMGYFHRTDTNKQVFMIDTAENPKCCTTEFDLTDKSINPVGGFVNYGRVQGDFIM 323
Query: 191 VKGCVPGAKKNSWILVRDSFKSAVNC 216
+KG PG K+ ++ R + NC
Sbjct: 324 IKGTCPGPKRRPVVM-RSALLPHRNC 348
>gi|73973636|ref|XP_868306.1| PREDICTED: similar to 60S ribosomal protein L3 (L4) isoform 8
[Canis familiaris]
Length = 390
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/234 (14%), Positives = 59/234 (25%), Gaps = 57/234 (24%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVHR--TLDKNGYMAVQ 50
+ + K GMT + + G ++ VT++ VV G +
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFK 103
Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLL------------------ 92
E + + K + D
Sbjct: 104 TIFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDDDGKKQLEKDFNSMKKYCQVIRVI 163
Query: 93 ------------------------PVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHN 128
V F +++DV G+T GKG+ G R +
Sbjct: 164 AHTQMRLLPLRQKKAHLMEIQVNGGTQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWH 223
Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
L R G P RV + AG+ G + T N ++ +
Sbjct: 224 TKKLP--RKTHRGLRKVACIG-AWHPARVAFSMARAGQKGYHHRTEINKKIYKI 274
>gi|123495590|ref|XP_001326781.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121909700|gb|EAY14558.1| hypothetical protein TVAG_388910 [Trichomonas vaginalis G3]
Length = 415
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/219 (15%), Positives = 64/219 (29%), Gaps = 43/219 (19%)
Query: 26 TVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRV 85
TV+ + G A + GA + N + ++ +
Sbjct: 155 TVIRVIAH--TQSAKTTTRGVDANEQGAKKVLKGNHLGQKKAHMIENQINGGDVAAKLNY 212
Query: 86 QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSH 145
K + + FT G+ +D G+ G G+ G + R+ L+ R
Sbjct: 213 AKS---ILEKEIKVADVFTEGEQIDTIGVGKGFGWEGVIHRYGTKRLQK--KTHRGRRKV 267
Query: 146 GSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD--------------------- 184
G +P RV + G+ G + T N + +
Sbjct: 268 ACIGP-WNPARVLWSVARYGQRGCHHRTEMNKRIYRIGAAEVEGKINEGGSTSFDLTKKS 326
Query: 185 -------------KRGLILVKGCVPGAKKNSWILVRDSF 210
K +++KG V G K + I +R +
Sbjct: 327 INPMGGFPHYGLVKDDFLMIKGSVVGTVKRA-ITLRKTI 364
Score = 39.6 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 26/109 (23%), Gaps = 18/109 (16%)
Query: 3 SGVVARKLGMTCVYNI----EGRRI------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
+ K GMT V R PVT+L VV GY G
Sbjct: 44 CAFIGYKAGMTHVLRDVVRPNSRLHKKEACEPVTILETPPMFVVGII-----GYKPTVEG 98
Query: 53 AG---EAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVF 98
V++ ++ + K + +
Sbjct: 99 LKPVTTVWASYVNEEVKRNYYKNWYQSKARKAFSCLSNGKAAEKREKQL 147
>gi|61654614|gb|AAX48833.1| L3 [Suberites domuncula]
Length = 399
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 49/313 (15%), Positives = 81/313 (25%), Gaps = 102/313 (32%)
Query: 3 SGVVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVH-------------- 38
+ + K GMT + R VT++ +V
Sbjct: 44 TAFMGYKAGMTHILREMNRPGSKSHKHEVVEAVTIIETPPIMIVGVVGYIETPRGLRPIK 103
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
R D+ G ++Q + K +
Sbjct: 104 TIFAQHLNDECRRRFYKNWSNSKKKAFSKASGRWKDEAGQKSIQADFDKLKKYCKVIRVI 163
Query: 67 GF----FSSVNVSPKKKLFEFRVQKD--------DDLLPVGSVFSPSYFTVGQLVDVTGM 114
+ K + E +V ++ F +++DV G+
Sbjct: 164 CHTQVQLLNGVRQKKAHIMEIQVNGGSISDKVDWAKEHMEKAIPIKDIFNKDEMIDVIGV 223
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
T GKGF G R + L R G P RV + AG+ G + T
Sbjct: 224 TKGKGFKGVTSRWHCKKLP--RKTHKGLRKVACIG-AWHPSRVSFSVARAGQKGYHHRTE 280
Query: 175 KNLEVVSV-DDKRG-----------------------------LILVKGCVPGAKKNSWI 204
N ++ + D + +++KG V G K I
Sbjct: 281 INKKIYRIGDKEDNANAATEFDPTEKRITPVGGFPHYGTVKNDFLMLKGAVVGP-KRRVI 339
Query: 205 LVRDSFKSAVNCK 217
+R S V K
Sbjct: 340 TMRKSLVVNVTRK 352
>gi|242017396|ref|XP_002429175.1| 60S ribosomal protein L3, putative [Pediculus humanus corporis]
gi|212514053|gb|EEB16437.1| 60S ribosomal protein L3, putative [Pediculus humanus corporis]
Length = 407
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 49/311 (15%), Positives = 77/311 (24%), Gaps = 108/311 (34%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVV--------------- 37
+ + K GMT V + G ++ VT++ +V
Sbjct: 44 TAFLGYKAGMTHVLREADRPGSKVNKKEIVEAVTIIETPPMIIVGAVGYIQTPHGLRALV 103
Query: 38 -----------HRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQ 86
R KN Y + Q +A K + K RV
Sbjct: 104 TVWAEHLSEDCRRRFYKNWYRSEQKAFTKASKKWQDELGVKSIDKSFKKIIKYCRCVRVI 163
Query: 87 KDDDLLPVGSVF-------------------------------SPSYFTVGQLVDVTGMT 115
+ + F +++D G+T
Sbjct: 164 AHTQMKLLKQRQKKAHIMEIQLNGGNMAQKVKWIKEHLEKPVPVSQVFAPDEMIDCIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV AG+ G + T
Sbjct: 224 KGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVQFTVARAGQKGYHHRTEM 280
Query: 176 NLEVVSV-------------------------------------DDKRGLILVKGCVPGA 198
N ++ + + I++KGC G
Sbjct: 281 NKKIYRIGQGIHYKDGKLVGNNASTDYDLTEKSITPMGGFPHYGEVNHDFIMIKGCCVGP 340
Query: 199 KKNSWILVRDS 209
KK I +R S
Sbjct: 341 KKR-VITLRKS 350
>gi|154422961|ref|XP_001584492.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121918739|gb|EAY23506.1| hypothetical protein TVAG_071700 [Trichomonas vaginalis G3]
Length = 415
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/219 (15%), Positives = 65/219 (29%), Gaps = 43/219 (19%)
Query: 26 TVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRV 85
TV+ + G A + GA + N + + ++ +
Sbjct: 155 TVIRVIAH--TQSAKTTTRGVDANEQGAKKVLKGNHLGQKKAHMIEIQINGGDVAAKLNY 212
Query: 86 QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSH 145
K + + FT G+ +D G+ G G+ G + R+ L+ R
Sbjct: 213 AKS---ILEKEIKVADVFTEGEQIDTIGVGKGFGWEGVIHRYGTKRLQK--KTHRGRRKV 267
Query: 146 GSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD--------------------- 184
G +P RV + G+ G + T N + +
Sbjct: 268 ACIGP-WNPARVLWSVARYGQRGCHHRTEMNKRIYRIGAAEVEGKINEGGSTSFDLTKKS 326
Query: 185 -------------KRGLILVKGCVPGAKKNSWILVRDSF 210
K +++KG V G K + I +R +
Sbjct: 327 INPMGGFPHYGLVKDDFLMIKGSVVGTVKRA-ITLRKTI 364
Score = 39.6 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 26/109 (23%), Gaps = 18/109 (16%)
Query: 3 SGVVARKLGMTCVYNI----EGRRI------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
+ K GMT V R PVT+L VV GY G
Sbjct: 44 CAFIGYKAGMTHVLRDVVRPNSRLHKKEACEPVTILETPPMFVVGII-----GYKPTIEG 98
Query: 53 AG---EAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVF 98
V++ ++ + K + +
Sbjct: 99 LKPVTTVWASYVNEEVKRNYYKNWYQSKARKAFSCLSNGKAAEKREKQL 147
>gi|326574320|gb|ADZ95675.1| 60S ribosomal protein L3 [Nosema bombycis]
Length = 664
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/275 (14%), Positives = 79/275 (28%), Gaps = 58/275 (21%)
Query: 3 SGVVARKLGMTCVY------NIEGRRI-----PVTVLHLDNCQVVVHRTLDKNGYMAVQV 51
+ + K GMT V + VT++ + + G ++
Sbjct: 216 TAFIGYKAGMTHVIRSKIIQTKNKQLSKEIMDAVTLIETPPMVIYGVTGYEVTGKGLNRI 275
Query: 52 GAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP----SYFTVGQ 107
A + S R F + + + DL + S ++ +
Sbjct: 276 ATVLAPHIDESVRRREFGKRWEQLSANIKEYNKEKAEKDLEEIRKRASVIRILAHTQPTK 335
Query: 108 LVDVTGMTIG----KGFSGAM-KRHNFGGLRATHGVSI--------SHRSHGSTGCR-QD 153
+ + + G + ++ ++ + V+I + + G
Sbjct: 336 IPALHLKKSHISEIQVNGGTINEKVDWALDKFEKEVTIDEVFEVNENLDTIGVACIGAWH 395
Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSV----------------------------DDK 185
P RV AG+MG +R T N +V + K
Sbjct: 396 PSRVMTTVARAGQMGFHRRTETNKKVYMIGNGNELIKTEFDLTEKPITPLGGIPHYGSIK 455
Query: 186 RGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGKV 220
I+VKG V G +K + +R S ++
Sbjct: 456 NDYIMVKGAVIGPRKR-VVTLRKSLYKTKKASEEL 489
>gi|159109947|ref|XP_001705236.1| Ribosomal protein L3 [Giardia lamblia ATCC 50803]
gi|157433317|gb|EDO77562.1| Ribosomal protein L3 [Giardia lamblia ATCC 50803]
Length = 379
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 48/146 (32%), Gaps = 34/146 (23%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
F+VG +D +T G+GF G + R L +R G P V
Sbjct: 207 DVFSVGAQIDTISITRGRGFEGVVTRWGVTRLP--RKTRRGNRKVACIG-AWHPANVQYT 263
Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKRG------------------------------LIL 190
AG+MG T N +V +D I+
Sbjct: 264 VARAGQMGYFHRTDTNKQVFMIDTAENPRCCTTEFDLTDKSINPVGGFVNYGRVQGDFIM 323
Query: 191 VKGCVPGAKKNSWILVRDSFKSAVNC 216
+KG PG K+ ++ R++ NC
Sbjct: 324 IKGTCPGPKRRPVVM-RNALLPHRNC 348
>gi|319079393|ref|NP_001187033.1| ribosomal protein L3 [Ictalurus punctatus]
gi|15293867|gb|AAK95126.1|AF401554_1 ribosomal protein L3 [Ictalurus punctatus]
Length = 402
Score = 63.1 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/247 (15%), Positives = 67/247 (27%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ VT++ VV
Sbjct: 43 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMMVVGIVGYVETPRGLRSFK 102
Query: 39 ------------RTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKL------ 80
R KN Y + + + K + S KK
Sbjct: 103 TVFAEHISDECRRRFYKNWYKSKKKAFTKYSKKWQDDEGKKQLEKDFSSMKKYCKVIRII 162
Query: 81 ----------------------FEFRVQKDDDLLPVGSVFSP---SYFTVGQLVDVTGMT 115
+ + D + + F+ +++DV G+T
Sbjct: 163 AHTQMRLLPLRQKKSHLMEIQLNGGTISEKVDWAREKLEQAVPINNVFSQDEMIDVIGVT 222
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
G G+ G R + L R G P RV + AG+ G + T
Sbjct: 223 KGHGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAFSVARAGQKGYHHRTEV 279
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 280 NKKIYKI 286
>gi|123440132|ref|XP_001310830.1| hypothetical protein [Trichomonas vaginalis G3]
gi|123470017|ref|XP_001318217.1| hypothetical protein [Trichomonas vaginalis G3]
gi|154419020|ref|XP_001582527.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121892616|gb|EAX97900.1| hypothetical protein TVAG_059650 [Trichomonas vaginalis G3]
gi|121900970|gb|EAY05994.1| hypothetical protein TVAG_124190 [Trichomonas vaginalis G3]
gi|121916763|gb|EAY21541.1| hypothetical protein TVAG_013060 [Trichomonas vaginalis G3]
Length = 415
Score = 63.1 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/219 (15%), Positives = 65/219 (29%), Gaps = 43/219 (19%)
Query: 26 TVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRV 85
TV+ + G A + GA + N + + ++ +
Sbjct: 155 TVIRVIAH--TQSAKTTTRGVDANEQGAKKVLKGNHLGQKKAHMIEIQINGGDVAAKLNY 212
Query: 86 QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSH 145
K + + FT G+ +D G+ G G+ G + R+ L+ R
Sbjct: 213 AKS---ILEKEIKVADVFTEGEQIDTIGVGKGFGWEGVIHRYGTKRLQK--KTHRGRRKV 267
Query: 146 GSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD--------------------- 184
G +P RV + G+ G + T N + +
Sbjct: 268 ACIGP-WNPARVLWSVARYGQRGCHHRTEMNKRIYRIGAAEVEGKINEGGSTSFDLTKKS 326
Query: 185 -------------KRGLILVKGCVPGAKKNSWILVRDSF 210
K +++KG V G K + I +R +
Sbjct: 327 INPMGGFPHYGLVKDDFLMIKGSVVGTVKRA-ITLRKTI 364
Score = 39.6 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 26/109 (23%), Gaps = 18/109 (16%)
Query: 3 SGVVARKLGMTCVYNI----EGRRI------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
+ K GMT V R PVT+L VV GY G
Sbjct: 44 CAFIGYKAGMTHVLRDVVRPNSRLHKKEACEPVTILETPPMFVVGII-----GYKPTVEG 98
Query: 53 AG---EAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVF 98
V++ ++ + K + +
Sbjct: 99 LKPVTTVWASYVNEEVKRNYYKNWYQSKARKAFSCLSNGKAAEKREKQL 147
>gi|328773128|gb|EGF83165.1| hypothetical protein BATDEDRAFT_29178 [Batrachochytrium
dendrobatidis JAM81]
Length = 390
Score = 63.1 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 47/139 (33%), Gaps = 34/139 (24%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
S F +++D+ G+T G GF G + R L R G P RV
Sbjct: 208 SIFEQDEMIDIIGITKGHGFEGVVARWGVKKLP--RKTHKGLRKVACIG-AWHPSRVQFA 264
Query: 161 KKMAGRMGGNRVTVKNLEVVSV---------DDKRGL---------------------IL 190
AG+ G + T N +V V + L ++
Sbjct: 265 VPRAGQDGYHHRTEMNKKVYRVGKAGDKNSASTEFDLTTKDITPMGGFPHYGMINEDWLM 324
Query: 191 VKGCVPGAKKNSWILVRDS 209
+KG PG +K + +R S
Sbjct: 325 IKGSCPGVRKR-VVTLRKS 342
>gi|171689180|ref|XP_001909530.1| hypothetical protein [Podospora anserina S mat+]
gi|170944552|emb|CAP70663.1| unnamed protein product [Podospora anserina S mat+]
Length = 392
Score = 63.1 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 46/138 (33%), Gaps = 34/138 (24%)
Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
F +++DV +T G GFSG R L R G P V
Sbjct: 209 IFEKDEMIDVIAVTKGHGFSGVTARWGTKKLP--RKTHKGLRKVACIG-AWHPSHVQWTV 265
Query: 162 KMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLILV 191
AG+MG + T N +V + + K ++V
Sbjct: 266 ARAGQMGYHHRTSVNHKVYRIGKGDADDNAATEIDVTKKTITPMGGFVRYGEIKNDFVMV 325
Query: 192 KGCVPGAKKNSWILVRDS 209
KG VPG KK + +R S
Sbjct: 326 KGSVPGTKKR-IMTLRKS 342
>gi|125535904|gb|EAY82392.1| hypothetical protein OsI_37606 [Oryza sativa Indica Group]
Length = 733
Score = 63.1 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 45/304 (14%), Positives = 81/304 (26%), Gaps = 103/304 (33%)
Query: 5 VVARKLGMTCVYNI---EGRRI-------PVTVLHLDNCQVVV----HRTL--------- 41
V K GMT + G ++ VT++ +V +T
Sbjct: 390 FVGYKAGMTHIVREVEKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRSLNSV 449
Query: 42 --------------------------------DKN-GYMAVQVGAGEAKVKNVSKPMRGF 68
D + G +Q+ + K +
Sbjct: 450 WAQHLSEEVRRRFYKNWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASIVRVIAH 509
Query: 69 ----------FSSVNVSPKKKLFEFRVQKDDDLL--PVGSVFSPSYFTVGQLVDVTGMTI 116
++ + K D + + F +++D+ G+T
Sbjct: 510 TQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTK 569
Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
GKG+ G + R L R G P RV AG+ G + T N
Sbjct: 570 GKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSYTVARAGQNGYHHRTEMN 626
Query: 177 LEVVSV---------------DDKRGL----------------ILVKGCVPGAKKNSWIL 205
+V + ++ + +++KGC G KK +
Sbjct: 627 KKVYKIGKSGQESHAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKR-VVT 685
Query: 206 VRDS 209
+R S
Sbjct: 686 LRQS 689
>gi|322695627|gb|EFY87432.1| 60S ribosomal protein L3 [Metarhizium acridum CQMa 102]
Length = 391
Score = 63.1 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 49/303 (16%), Positives = 75/303 (24%), Gaps = 100/303 (33%)
Query: 3 SGVVARKLGMTCVY----------NIEGRRIPVTVLHLDNCQVVV--------------- 37
+ + K GMT + N + VTV+ VV
Sbjct: 44 TAAMGYKAGMTTIVRDLDRPGAKANKKEVVEAVTVVDTPPMIVVGLVGYIETPRGLRSLT 103
Query: 38 -----------HRTLDKNGYMAVQVGA-------------------GEAKVKNVSKPMRG 67
R KN Y + + K +
Sbjct: 104 TVWAEHLSDEVKRRFYKNWYKSKKKAFTKYAKKHSESSGASITRELERIKKYCTVVRVLA 163
Query: 68 FFSSVNVSPKKKLFEFR-----------VQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTI 116
K+K L V + F +++DV +T
Sbjct: 164 HTQIRKTPLKQKKAHLMEIQINGGSVADKVSFGQDLFEKPVSIDTIFEQDEMIDVIAVTK 223
Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
G GF+G R L R G P V AG+MG + T N
Sbjct: 224 GHGFNGVTARWGTKKLP--RKTHKGLRKVACIG-AWHPSHVQWTVARAGQMGYHHRTSVN 280
Query: 177 LEVVSV---DDK---------------------------RGLILVKGCVPGAKKNSWILV 206
+V + D + +++KG +PG KK + +
Sbjct: 281 HKVYRIGKGDAEDSASTEVDVTKKKITPLGGFVRYGEVNNDFVMLKGSIPGVKKR-VMTL 339
Query: 207 RDS 209
R S
Sbjct: 340 RKS 342
>gi|123445156|ref|XP_001311341.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121893146|gb|EAX98411.1| hypothetical protein TVAG_125550 [Trichomonas vaginalis G3]
Length = 415
Score = 63.1 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 35/219 (15%), Positives = 65/219 (29%), Gaps = 43/219 (19%)
Query: 26 TVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRV 85
TV+ + G A + GA + N + + ++ +
Sbjct: 155 TVIRVIAH--TQSAKTTTRGVDANEQGAKKVLKGNHLGQKKAHMIEIQINGGDVAAKLNY 212
Query: 86 QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSH 145
K + + FT G+ +D G+ G G+ G + R+ L+ R
Sbjct: 213 AKS---ILEKEIKVADVFTEGEQIDTIGVGKGFGWEGVIHRYGTKRLQK--KTHRGRRKV 267
Query: 146 GSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD--------------------- 184
G +P RV + G+ G + T N + +
Sbjct: 268 ACIGP-WNPARVLWSVARYGQRGCHHRTEMNKRIYRIGAAEVEGKINEGGSTSFDLTKKS 326
Query: 185 -------------KRGLILVKGCVPGAKKNSWILVRDSF 210
K +++KG V G K + I +R +
Sbjct: 327 INPMGGFPHYGLVKDDFLMIKGSVVGTVKRA-ITLRKTI 364
Score = 39.6 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 17/109 (15%), Positives = 26/109 (23%), Gaps = 18/109 (16%)
Query: 3 SGVVARKLGMTCVYNI----EGRRI------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
+ K GMT V R PVT+L VV GY G
Sbjct: 44 CAFIGYKAGMTHVLRDVVRPNSRLHKKEACEPVTILETPPMFVVGII-----GYKPTVEG 98
Query: 53 AG---EAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVF 98
V++ ++ + K + +
Sbjct: 99 LKPVTTVWASYVNEEVKRNYYKNWYQSKARKAFSCLSNGKAAEKREKQL 147
>gi|46123823|ref|XP_386465.1| RL3_NEUCR 60S ribosomal protein L3 [Gibberella zeae PH-1]
Length = 378
Score = 63.1 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 43/131 (32%), Gaps = 33/131 (25%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
S F +++DV +T G GF+G R L R G P V
Sbjct: 195 SIFEQDEMIDVVAVTKGHGFNGVTARWGTKKLP--RKTHKGLRKVACIG-AWHPSHVQWT 251
Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
AG+MG + T N ++ + + K ++
Sbjct: 252 VARAGQMGYHHRTSVNHKIYRIGKGDADDNAATEIDVTKKTITPLGGFVRYGEVKNDFVM 311
Query: 191 VKGCVPGAKKN 201
+KG +PG KK
Sbjct: 312 LKGSIPGVKKR 322
>gi|195329914|ref|XP_002031655.1| GM23925 [Drosophila sechellia]
gi|194120598|gb|EDW42641.1| GM23925 [Drosophila sechellia]
Length = 611
Score = 63.1 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 42/245 (17%), Positives = 63/245 (25%), Gaps = 70/245 (28%)
Query: 5 VVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVV------------------ 36
+ K GMT + + G +I VTVL VV
Sbjct: 46 FIGYKAGMTHIVREADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNV 105
Query: 37 --VHRTLD------KNGYMAVQVGAGEAKVKNVSK----PMRGFFSSVNVSPKKKLFEFR 84
H + + KN Y + + +A K + F + K
Sbjct: 106 WAQHLSEECRRRFYKNWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAH 165
Query: 85 VQKDDDLLPVGSVFSPS---------------------------YFTVGQLVDVTGMTIG 117
Q F +++D G+T G
Sbjct: 166 SQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKG 225
Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
KGF G R + L R G P RV AG+ G + T N
Sbjct: 226 KGFKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVSTTVARAGQKGYHHRTEINK 282
Query: 178 EVVSV 182
++ +
Sbjct: 283 KIYRI 287
>gi|260946767|ref|XP_002617681.1| 60S ribosomal protein L3 [Clavispora lusitaniae ATCC 42720]
gi|238849535|gb|EEQ38999.1| 60S ribosomal protein L3 [Clavispora lusitaniae ATCC 42720]
Length = 388
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 45/302 (14%), Positives = 73/302 (24%), Gaps = 99/302 (32%)
Query: 3 SGVVARKLGMTCV---YNIEGRRI-------PVTVLHLDNCQVVVHR--TLDKNGYMAVQ 50
+ + K GMT + + G ++ TV+ +V G ++
Sbjct: 44 TAFLGYKAGMTTIVRDLDRPGSKMHKREVVEAATVVDTPPMVIVGVVGYVETPRGLRSLT 103
Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDD-------------------- 90
E + V + + K Q ++
Sbjct: 104 TVWAEHLSEEVRRRFYKNWYKSKKKAFTKYSAKYAQNGEEINRELARITKYASVVRVLVH 163
Query: 91 ---------------------------------LLPVGSVFSPSYFTVGQLVDVTGMTIG 117
+V S F +++DV +T G
Sbjct: 164 TQVKKTPLSQKKAHLAEIQINGGSIEDKVNWAKEHFEKTVSVDSVFEKDEMIDVVAVTKG 223
Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
GF G R L R G P V AG+ G + T N
Sbjct: 224 HGFEGVTHRWGTKKLP--RKTHRGLRKVACIG-AWHPANVNWTVARAGQNGYHHRTSINH 280
Query: 178 EVVSV------------------------------DDKRGLILVKGCVPGAKKNSWILVR 207
+V V +L+KG +PG KK + +R
Sbjct: 281 KVYRVGSGADEANGATEFDRTKKTINPLGGFVRYGLVNNDFVLLKGSIPGIKKR-VVTLR 339
Query: 208 DS 209
S
Sbjct: 340 KS 341
>gi|114610091|ref|XP_001143080.1| PREDICTED: hypothetical protein [Pan troglodytes]
Length = 462
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 40/247 (16%), Positives = 66/247 (26%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ VT++ VV
Sbjct: 103 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFK 162
Query: 39 ------------RTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQ 86
R KN + + + + K + + S KK RV
Sbjct: 163 TVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEDDKKQLEKDFSSMKKYCQVIRVI 222
Query: 87 KD-------------------------------DDLLPVGSVFSPSYFTVGQLVDVTGMT 115
V F +++DV G+T
Sbjct: 223 AHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 282
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV + AG+ G + T
Sbjct: 283 KGKGYKGVTSRWHTKNLP--RKTHQGLRKVACIG-AWHPARVAFSVARAGQKGYHHRTEI 339
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 340 NKKIYKI 346
>gi|189240524|ref|XP_971875.2| PREDICTED: similar to ribosomal protein L3e [Tribolium castaneum]
gi|270011378|gb|EFA07826.1| hypothetical protein TcasGA2_TC005395 [Tribolium castaneum]
Length = 409
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 51/311 (16%), Positives = 78/311 (25%), Gaps = 108/311 (34%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT V + G +I VT+L +V
Sbjct: 44 TAFIGYKAGMTHVVREADRPGSKINKKEIVEAVTILETPPMMIVGVVGYIETPHGLRALA 103
Query: 39 ------------RTLDKNGYMAVQVGAGEAKVKNV----SKPMRGFFSSVNVSPKKKLFE 82
R KN Y + + +A K K + F + K
Sbjct: 104 TIWAEHLSEDCRRRFYKNWYKSKKKAFTKASKKWNDDLGKKSIERDFKKIIKYCKVVRVI 163
Query: 83 FRVQKD---------------------------DDLLPVGSVFSPSYFTVGQLVDVTGMT 115
Q + F +++D G+T
Sbjct: 164 AHTQMKLLNQRQKKAHIMEIQLNGGSVVDKVQWAREHLEKPIPVAQVFAQDEMIDCIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV AG+ G + T
Sbjct: 224 KGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVSFTVARAGQKGYHHRTEM 280
Query: 176 NLEVVSV-------------------------------------DDKRGLILVKGCVPGA 198
N ++ + + I++KGC G
Sbjct: 281 NKKIYRIGAGIHTKDGKVIKNNASTEYDLTEKTITPMGGFPHYGEVNNDFIMIKGCCMGP 340
Query: 199 KKNSWILVRDS 209
KK I +R S
Sbjct: 341 KKR-VITLRKS 350
>gi|308323287|gb|ADO28780.1| 60S ribosomal protein l3 [Ictalurus punctatus]
Length = 403
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/247 (15%), Positives = 67/247 (27%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ VT++ VV
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMMVVGIVGYVETPRGLRSFK 103
Query: 39 ------------RTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKL------ 80
R KN Y + + + K + S KK
Sbjct: 104 TVFAEHISDECRRRFYKNWYKSKKKAFTKYSKKWQDDEGKKQLEKDFSSMKKYCKVIRII 163
Query: 81 ----------------------FEFRVQKDDDLLPVGSVFSP---SYFTVGQLVDVTGMT 115
+ + D + + F+ +++DV G+T
Sbjct: 164 AHTQMRLLPLRQKKSHLMEIQLNGGTISEKVDWAREKLEQAVPINNVFSQDEMIDVIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
G G+ G R + L R G P RV + AG+ G + T
Sbjct: 224 KGHGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAFSVARAGQKGYHHRTEV 280
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 281 NKKIYKI 287
>gi|145475213|ref|XP_001423629.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145532966|ref|XP_001452233.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124390690|emb|CAK56231.1| unnamed protein product [Paramecium tetraurelia]
gi|124419921|emb|CAK84836.1| unnamed protein product [Paramecium tetraurelia]
Length = 393
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/150 (20%), Positives = 52/150 (34%), Gaps = 34/150 (22%)
Query: 99 SPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVF 158
F + +DV G+T GKG +G +KR L+ R G G P V
Sbjct: 204 VDQVFKQNEQIDVLGVTKGKGVAGVIKRFGVKHLQK--KTHRGWRRVGCIG-GWHPANVR 260
Query: 159 KNKKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGL 188
+ G++G + T N ++ + + +
Sbjct: 261 YSVARTGQLGYHHRTEMNKKIYRIGAAGDKNTASTEADLTSKAITPLGGFPHYGEIRNDF 320
Query: 189 ILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+++KG + G KK +L+R S + K
Sbjct: 321 LMLKGGIVGPKKR-VVLLRKSLVPQTSRKA 349
>gi|305662572|ref|YP_003858860.1| LSU ribosomal protein L3P [Ignisphaera aggregans DSM 17230]
gi|304377141|gb|ADM26980.1| LSU ribosomal protein L3P [Ignisphaera aggregans DSM 17230]
Length = 340
Score = 62.7 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
F VGQ +D+ G+T GKGF G +KR L H R GS
Sbjct: 195 QVFNVGQFIDIIGVTKGKGFQGVIKRFGVKELPRWHKHRKGSRRIGSRSPTIGA---MSE 251
Query: 161 KKMAGRMGGNRVTVKNLEVVSVDDKRGLILVKGCVP--GAKKNSWILVRDS 209
AG+MG +R T N ++++ DK I G P G K+ WI+V+ S
Sbjct: 252 TPQAGQMGFHRRTEYNKRILAMGDKGEEITPSGGFPHYGIVKSMWIMVQGS 302
>gi|145497857|ref|XP_001434917.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402045|emb|CAK67520.1| unnamed protein product [Paramecium tetraurelia]
Length = 341
Score = 62.7 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 30/150 (20%), Positives = 52/150 (34%), Gaps = 34/150 (22%)
Query: 99 SPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVF 158
F + +DV G+T GKG +G +KR L+ R G G P V
Sbjct: 152 VDQVFKQNEQIDVLGVTKGKGVAGVIKRFGVKHLQK--KTHRGWRRVGCIG-GWHPANVR 208
Query: 159 KNKKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGL 188
+ G++G + T N ++ + + +
Sbjct: 209 YSVARTGQLGYHHRTEMNKKIYRIGAAGDKNTASTEADLTSKAITPLGGFPHYGEIRNDF 268
Query: 189 ILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+++KG + G KK +L+R S + K
Sbjct: 269 LMLKGGIVGPKKR-VVLLRKSLVPQTSRKA 297
>gi|156082902|ref|XP_001608935.1| ribosomal protein L3 [Babesia bovis T2Bo]
gi|154796185|gb|EDO05367.1| ribosomal protein L3, putative [Babesia bovis]
Length = 393
Score = 62.7 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 49/307 (15%), Positives = 80/307 (26%), Gaps = 97/307 (31%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVV--------------- 37
+ + K GMT V + G ++ VT++ VV
Sbjct: 44 TAFMGYKAGMTHVTHEPDKPGSKLHKKDTVEAVTIIETPPMIVVGLVGYIETPRGLRVLT 103
Query: 38 -----------HRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQ 86
R KN Y + + + K M S + Q
Sbjct: 104 TVWAGHLSDECRRRFYKNWYKSKKKAFTKYAKKFAETKMSKDISRIVNYCTVVRAICHTQ 163
Query: 87 KDDDLLPVGSVFSPS---------------------------YFTVGQLVDVTGMTIGKG 119
L + F F ++VDV G+T G G
Sbjct: 164 PSKTPLSMKKAFIIEIQVNGGTVQEKVDYVTKMFEQPLPVNAVFASNEMVDVLGVTKGHG 223
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
G + R L R G P RV +G+ G T +N ++
Sbjct: 224 MKGVISRFGVTRLP--RKTHRGLRKVACIG-SWHPARVQFQVPRSGQKGYFHRTERNKKI 280
Query: 180 VSV------------------------------DDKRGLILVKGCVPGAKKNSWILVRDS 209
+ + K +++KGC+ G KK + +R +
Sbjct: 281 YRLGLGSNPRNASTDADLTEKQITPMGGFPHYGEVKDDFLMIKGCIVGTKKRPIV-IRKT 339
Query: 210 FKSAVNC 216
V+
Sbjct: 340 LVPQVSR 346
>gi|321477553|gb|EFX88511.1| hypothetical protein DAPPUDRAFT_206128 [Daphnia pulex]
Length = 412
Score = 62.7 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 41/247 (16%), Positives = 68/247 (27%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ +A K GMT + + G ++ VT+L +V
Sbjct: 44 TAFLAYKAGMTHIVRECDKPGSKVNKKEVVEAVTILETPPMVIVGIVGYVATPKGLRALK 103
Query: 39 ------------RTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQ 86
R KN Y + + +A K + + K+ RV
Sbjct: 104 TVWAEHIGEDCRRRFYKNWYKSKKKAFTKASKKWQDDLGKKVIEKELRAMKRYCKVIRVI 163
Query: 87 KDDDLLPVGSVFSPSYFTVGQ-------------------------------LVDVTGMT 115
+ + ++ Q ++DV G+T
Sbjct: 164 AHTQMKLLRQRQKKAHMMEIQVNGGTIRQKVDWARQHLEKTIPITSLFAQDEMIDVIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKGF G R + L R G P RV AG+ G + T
Sbjct: 224 KGKGFKGVTSRWHTRKLP--RKTHKGLRKVACIG-AWHPSRVQYTVARAGQKGYHHRTEM 280
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 281 NKKIYRI 287
>gi|116204627|ref|XP_001228124.1| 60S ribosomal protein L3 [Chaetomium globosum CBS 148.51]
gi|88176325|gb|EAQ83793.1| 60S ribosomal protein L3 [Chaetomium globosum CBS 148.51]
Length = 392
Score = 62.7 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 46/141 (32%), Gaps = 34/141 (24%)
Query: 99 SPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVF 158
S F +++DV +T G GFSG R L R G P V
Sbjct: 206 VDSIFEKDEMIDVIAVTKGHGFSGVTARWGTKKLP--RKTHKGLRKVACIG-AWHPSHVQ 262
Query: 159 KNKKMAGRMGGNRVTVKNLEVVSV---DDK---------------------------RGL 188
AG+MG + T N +V + D
Sbjct: 263 WTVARAGQMGYHHRTSVNHKVYRIGKGDADDSAATEIDVTKKKITPMGGFVRYGEVNNDF 322
Query: 189 ILVKGCVPGAKKNSWILVRDS 209
++VKG VPG KK + +R S
Sbjct: 323 VMVKGSVPGVKKR-VMTLRKS 342
>gi|40882439|gb|AAR96131.1| RH62603p [Drosophila melanogaster]
Length = 465
Score = 62.3 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 42/245 (17%), Positives = 63/245 (25%), Gaps = 70/245 (28%)
Query: 5 VVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVV------------------ 36
+ K GMT + + G +I VTVL VV
Sbjct: 57 FIGYKAGMTHIVREADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNV 116
Query: 37 --VHRTLD------KNGYMAVQVGAGEAKVKNVSK----PMRGFFSSVNVSPKKKLFEFR 84
H + + KN Y + + +A K + F + K
Sbjct: 117 WAQHLSEECRRRFYKNWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAH 176
Query: 85 VQKDDDLLPVGSVFSPS---------------------------YFTVGQLVDVTGMTIG 117
Q F +++D G+T G
Sbjct: 177 SQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKG 236
Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
KGF G R + L R G P RV AG+ G + T N
Sbjct: 237 KGFKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVSTTVARAGQKGYHHRTEINK 293
Query: 178 EVVSV 182
++ +
Sbjct: 294 KIYRI 298
>gi|119580719|gb|EAW60315.1| ribosomal protein L3, isoform CRA_f [Homo sapiens]
Length = 430
Score = 62.3 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/247 (14%), Positives = 66/247 (26%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ VT++ VV
Sbjct: 71 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFK 130
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ D++G ++ K +
Sbjct: 131 TVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVI 190
Query: 67 GF---------FSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMT 115
++ + +K D V F +++DV G+T
Sbjct: 191 AHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 250
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV + AG+ G + T
Sbjct: 251 KGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAFSVARAGQKGYHHRTEI 307
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 308 NKKIYKI 314
>gi|224082478|ref|XP_002306708.1| predicted protein [Populus trichocarpa]
gi|118481111|gb|ABK92509.1| unknown [Populus trichocarpa]
gi|222856157|gb|EEE93704.1| predicted protein [Populus trichocarpa]
Length = 389
Score = 62.3 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 47/304 (15%), Positives = 78/304 (25%), Gaps = 103/304 (33%)
Query: 5 VVARKLGMTCVYNI---EGRRI-------PVTVLHLDNCQVVVH---------------- 38
+ K GMT + G ++ VT++ +V
Sbjct: 46 FLGYKAGMTHIVREVEKPGSKLHKKETCEAVTIVETPPMVIVGVVGYLKTPSGLRTLNTV 105
Query: 39 -----------------------------RTLDKN-GYMAVQVGAGEAKVKNVSKPMRGF 68
+ + + G ++Q + K +
Sbjct: 106 WAQHLSEEVKRRFYKNWCKSKKKAFAKYSKQYETDEGKKSIQSQLEKLKKYATVIRVLAH 165
Query: 69 FS----SVNVSPKKKLFEFRVQKD--------DDLLPVGSVFSPSYFTVGQLVDVTGMTI 116
K L E +V V + F +++DV G+T
Sbjct: 166 TQIRKMKGLKQKKAHLMEIQVNGGTIAQKVDFAYGFFEKQVPIDAVFQKDEMIDVIGVTK 225
Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
GKG+ G + R L R G P RV AG+ G + T N
Sbjct: 226 GKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSFTVARAGQNGYHHRTELN 282
Query: 177 LEVVSV-------------------------------DDKRGLILVKGCVPGAKKNSWIL 205
++ V K +++KGC G KK +
Sbjct: 283 KKIYKVGKVGQETHTAITEYDRTEKDITPLGGFPHYGVVKDDYLMIKGCCVGPKKR-VVT 341
Query: 206 VRDS 209
+R S
Sbjct: 342 LRQS 345
>gi|332028947|gb|EGI68965.1| 60S ribosomal protein L3 [Acromyrmex echinatior]
Length = 484
Score = 62.3 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 52/311 (16%), Positives = 81/311 (26%), Gaps = 108/311 (34%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVV--------------- 37
+ + K GMT V + G ++ VT+L VV
Sbjct: 114 TAFIGYKAGMTHVVREADRPGSKVNKKEIVEAVTILETPPMIVVGLVGYIETPHGLRALA 173
Query: 38 -----------HRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQ 86
R KN Y + + +A K R + KK R+
Sbjct: 174 TVWAEHLSEDCRRRFYKNWYKSKKKAFTKASKKWQDDLGRKSIEADLKKIKKYCSVVRII 233
Query: 87 KDDDLLPVGSVFSPSYFTVGQ-------------------------------LVDVTGMT 115
+ + ++ Q ++DV G+T
Sbjct: 234 AHTQMKLLRQRQKKAHIMEIQLNGGTIEDKVQWAREHLEKPVPISSVFASDEMIDVIGVT 293
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV AG+ G + T
Sbjct: 294 KGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVSFTVARAGQKGYHHRTEM 350
Query: 176 NLEVVSV-------------------------------------DDKRGLILVKGCVPGA 198
N ++ + + I++KGC G
Sbjct: 351 NKKIYRIGQGIHTKDGKIVKNNASTEYDLTDKSITPMGGFPHYGEVNNDFIMIKGCCMGP 410
Query: 199 KKNSWILVRDS 209
KK I +R S
Sbjct: 411 KKR-VITLRKS 420
>gi|255946257|ref|XP_002563896.1| Pc20g14180 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588631|emb|CAP86747.1| Pc20g14180 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 392
Score = 62.3 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 45/141 (31%), Gaps = 33/141 (23%)
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
L ++ S F +++DV +T G GFSG R L R G
Sbjct: 198 NLFEKTIDIDSIFEKDEMIDVIAVTKGHGFSGVTSRWGTTKLP--RKTHKGLRKVACIG- 254
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV---------------------------- 182
P V AG+ G + T N +V +
Sbjct: 255 AWHPNHVQWTVARAGQDGYHHRTSCNHKVFRIGKGTDEGNASTEFDISKKQITPMGGFVH 314
Query: 183 --DDKRGLILVKGCVPGAKKN 201
+ K ++VKG +PG KK
Sbjct: 315 YGEVKNDFVMVKGSIPGVKKR 335
>gi|168040500|ref|XP_001772732.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168040502|ref|XP_001772733.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675957|gb|EDQ62446.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675958|gb|EDQ62447.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 392
Score = 62.3 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 53/312 (16%), Positives = 82/312 (26%), Gaps = 104/312 (33%)
Query: 5 VVARKLGMTCVYNI---EGRRI-------PVTVLHLDNCQVVV----HRTLD-------- 42
+ K GMT + G ++ VT++ VV +T
Sbjct: 46 FLGYKAGMTHIVREVEKPGSKLHKKETCEAVTIVETPPMVVVGLVAYIKTPRGLRSLNTV 105
Query: 43 --------------KNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRV--- 85
KN Y + + + + S+ + S KK RV
Sbjct: 106 WAQHLSDEVKRRFYKNWYKSKKKAFSKYSKRYESEEGKKDVESELERMKKYASVIRVLAH 165
Query: 86 -----------------------------QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTI 116
L V S F +++D+ G+T
Sbjct: 166 TQVRKLKGIKQKKAHLAEIQVNGGSIAAKVDFGYKLFEKEVPVDSVFRKDEMIDIIGVTR 225
Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
G G+ G + R L R G P RV AG+ G + T N
Sbjct: 226 GHGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSFTVARAGQNGYHHRTEMN 282
Query: 177 LEVVSV--------------------------------DDKRGLILVKGCVPGAKKNSWI 204
+V V + +++KG V G KK I
Sbjct: 283 KKVYKVGKVADKQSFSASTEFDVTEKEITPMGGFAHYGIVREDYLMIKGGVMGPKKR-VI 341
Query: 205 LVRDSFKSAVNC 216
+R S V+
Sbjct: 342 TLRQSLYKQVSR 353
>gi|307204449|gb|EFN83156.1| 60S ribosomal protein L3 [Harpegnathos saltator]
Length = 402
Score = 62.3 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 51/311 (16%), Positives = 80/311 (25%), Gaps = 108/311 (34%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + +G +I VT+L VV
Sbjct: 31 TAFIGYKAGMTHIVREADRQGSKINKKEIVEAVTILETPPMIVVGIVGYIETPHGLRALS 90
Query: 39 ------------RTLDKNGYMAVQVGAGEAKVKN-------------------------V 61
R KN Y + + +A K +
Sbjct: 91 TVWAEHLSEDCRRRFYKNWYKSKKKAFTKASKKWQDDIGRKSIEADLKKIKKYCSVVRII 150
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDD------LLPVGSVFSPSYFTVGQLVDVTGMT 115
+ + +D V S F +++DV G+T
Sbjct: 151 THTQMKLLRQRQKKAHIMEVQLNGGTIEDKVQWAREHLEKPVPVSSVFARDEMIDVIGVT 210
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV AG+ G + T
Sbjct: 211 KGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVSFTVARAGQKGYHHRTEM 267
Query: 176 NLEVVSV-------------------------------------DDKRGLILVKGCVPGA 198
N ++ + + I++KGC G
Sbjct: 268 NKKIYRIGQGIHTKDGKIVKNNASTEYDLTEKTITPMGGFPHYGEVNNDFIMIKGCCMGP 327
Query: 199 KKNSWILVRDS 209
KK I +R S
Sbjct: 328 KKR-VITLRKS 337
>gi|224095133|ref|XP_002198398.1| PREDICTED: similar to ribosomal protein L3 [Taeniopygia guttata]
Length = 403
Score = 61.9 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 48/311 (15%), Positives = 82/311 (26%), Gaps = 108/311 (34%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ VT++ +V
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIIETPPMVIVGIVGYVQTPRGLRSFK 103
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ D++G ++ K +
Sbjct: 104 TIFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFNSMKKYCQVIRVM 163
Query: 67 GFFSSVNVS---PKKKLFEFRVQKD--------DDLLPVGSVFSPSYFTVGQLVDVTGMT 115
+ K L E +V V + F +++DV G+T
Sbjct: 164 AHTQMRLLPLRQKKSHLMEIQVNGGTVAEKVDWAREKLEQQVPVATVFGQDEMIDVIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV + AG+ G + T
Sbjct: 224 KGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAFSVARAGQKGYHHRTEI 280
Query: 176 NLEVVSV-------------------------------------DDKRGLILVKGCVPGA 198
N ++ + + I+VKGCV G
Sbjct: 281 NKKIYKIGQGYQIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMVKGCVVGT 340
Query: 199 KKNSWILVRDS 209
KK + +R S
Sbjct: 341 KKR-VLTLRKS 350
>gi|161528317|ref|YP_001582143.1| 50S ribosomal protein L3P [Nitrosopumilus maritimus SCM1]
gi|160339618|gb|ABX12705.1| ribosomal protein L3 [Nitrosopumilus maritimus SCM1]
Length = 331
Score = 61.9 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 57/274 (20%), Positives = 93/274 (33%), Gaps = 72/274 (26%)
Query: 7 ARKLGMTCVYN-IEGRRIP------V---TVLHLDNCQVVVHR--TLDKNGYMAVQVGAG 54
K G + + + ++P V TVL ++ R + D +G A
Sbjct: 47 GFKAGCVQIVSIDDREKVPNAGKQLVSLGTVLVTPPVLILGIRGYSKDHDGLHAEFDVYA 106
Query: 55 EAKVKNVSKPM--------------------RGFFSSVNVSP--------KKKLFEFRVQ 86
E K+++K + + F+ V +SP K +FE V
Sbjct: 107 EDIPKSIAKEISLKNKQENALDNAEKSLKKIKEIFAIVAISPSAAGLEQKKPYIFEASVS 166
Query: 87 KDD--------DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGV 138
D L + F G VDV +T GKG+ G +KR N H
Sbjct: 167 GGDIPKQFAHVKELLGKEIKIDQIFETGASVDVAAITKGKGWQGVLKRWNVKK--KQHKS 224
Query: 139 SISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV----------VSVDDKRG- 187
+ R GS G P V AG+ G ++ + + + ++ G
Sbjct: 225 RKTVREVGSLGPIS-PQSVMYTVPRAGQFGFHQRVEYDKRIMIMGNTDDDKLKINPDGGF 283
Query: 188 ---------LILVKGCVPGAKKNSWILVRDSFKS 212
I++KG VPGA + I +R ++
Sbjct: 284 KHFGLVKGDFIVLKGSVPGAYRR-LIKLRSQIRN 316
>gi|321458193|gb|EFX69265.1| hypothetical protein DAPPUDRAFT_301006 [Daphnia pulex]
Length = 416
Score = 61.9 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 41/247 (16%), Positives = 68/247 (27%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ +A K GMT + + G ++ VT+L +V
Sbjct: 44 TAFLAYKAGMTHIVRECDKPGSKVNKKEVVEAVTILETPPMVIVGIVGYVATPKGLRALK 103
Query: 39 ------------RTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQ 86
R KN Y + + +A K + + K+ RV
Sbjct: 104 TVWAEHIGEDCRRRFYKNWYKSKKKAFTKASKKWQDDLGKKVIEKELRAMKRYCKVIRVI 163
Query: 87 KDDDLLPVGSVFSPSYFTVGQ-------------------------------LVDVTGMT 115
+ + ++ Q ++DV G+T
Sbjct: 164 AHTQMKLLRQRQKKAHMMEIQVNGGTVRQKVDWARQHLEKTIPITSLFAQDEMIDVIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKGF G R + L R G P RV AG+ G + T
Sbjct: 224 KGKGFKGVTSRWHTRKLP--RKTHKGLRKVACIG-AWHPSRVQFTVARAGQKGYHHRTEM 280
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 281 NKKIYRI 287
>gi|121543847|gb|ABM55588.1| putative ribosomal protein L3 [Maconellicoccus hirsutus]
Length = 406
Score = 61.9 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 51/309 (16%), Positives = 78/309 (25%), Gaps = 108/309 (34%)
Query: 5 VVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH---------------- 38
+ K GMT V + G ++ PVT++ +V
Sbjct: 46 FLGYKAGMTHVVREADRPGSKVNKKEIVEPVTIIETPPMVIVGVVGYIETPHGLKALSTV 105
Query: 39 ----------RTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVS------------- 75
R KN Y A + +A K R
Sbjct: 106 WAEHLSEDCRRRFYKNWYKAKKRAFTKASKKWQDPLGRKAIDKELAKISKYCKVVRVIAH 165
Query: 76 ----------PKKKLFEFRVQKD--------DDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
K + E +V +V F +++D +T G
Sbjct: 166 TQMKLLKFRQKKSHIMEIQVNGGTVPEKVQWAKAHFEKAVPVSHVFAQDEMIDCIAVTKG 225
Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
KG+ G R + L R G P RV AG+ G + T N
Sbjct: 226 KGYKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVQFTVARAGQKGYHHRTEINK 282
Query: 178 EVVSV-------------------------------------DDKRGLILVKGCVPGAKK 200
++ + + I++KGC G KK
Sbjct: 283 KIYRIGAGIHTKDGKVVKNNASTEYDLTEKTITPMGGFPHYGEVNNDFIMIKGCCVGPKK 342
Query: 201 NSWILVRDS 209
I +R S
Sbjct: 343 R-VITLRKS 350
>gi|255071333|ref|XP_002507748.1| ribosomal protein L3 [Micromonas sp. RCC299]
gi|226523023|gb|ACO69006.1| ribosomal protein L3 [Micromonas sp. RCC299]
Length = 385
Score = 61.9 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 44/139 (31%), Gaps = 35/139 (25%)
Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
F +++D ++ GKGF G + R L R G G P RV
Sbjct: 207 VFNKDEMIDCISVSKGKGFEGVVTRWGVTRLP--RKTHRGLRKVGCIG-AWHPARVAFTV 263
Query: 162 KMAGRMGGNRVTVKNLEVVSVDDK-------------------------------RGLIL 190
G+ G + T N ++ V + ++
Sbjct: 264 ARPGQHGYHHRTEINKKIYRVGKEGEDSHKATTEHDATDKDITPMGGFPHYGIVKNDYLM 323
Query: 191 VKGCVPGAKKNSWILVRDS 209
+KG + G +K I +R S
Sbjct: 324 IKGGIAGPRKR-VITLRQS 341
>gi|308798657|ref|XP_003074108.1| ribosomal protein L3.e, cytosolic-rice sp|P35684|RL3_ORYSA 60S
ribosomal p (ISS) [Ostreococcus tauri]
gi|116000280|emb|CAL49960.1| ribosomal protein L3.e, cytosolic-rice sp|P35684|RL3_ORYSA 60S
ribosomal p (ISS) [Ostreococcus tauri]
Length = 421
Score = 61.9 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 36/149 (24%), Positives = 52/149 (34%), Gaps = 35/149 (23%)
Query: 92 LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR 151
L +V S F +++D+ G+T GKGF G + R L R G G
Sbjct: 232 LFEKTVPVDSVFQQDEMIDLIGVTKGKGFQGVVTRWGVTKLP--RKTHRGLRKVGCIG-A 288
Query: 152 QDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV----------------------------- 182
P RV AG+MG + T N +V +
Sbjct: 289 WHPSRVSYTVARAGQMGYHHRTELNKKVYKIGKAGTANFGANTDFDPTEKEITPMGGFGH 348
Query: 183 --DDKRGLILVKGCVPGAKKNSWILVRDS 209
K +++KG V G +K I +R S
Sbjct: 349 YGIVKSDYVMIKGGVVGPRKR-LITMRQS 376
>gi|119580717|gb|EAW60313.1| ribosomal protein L3, isoform CRA_d [Homo sapiens]
Length = 429
Score = 61.6 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 36/247 (14%), Positives = 66/247 (26%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ VT++ VV
Sbjct: 70 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFK 129
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ D++G ++ K +
Sbjct: 130 TVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVI 189
Query: 67 GF---------FSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMT 115
++ + +K D V F +++DV G+T
Sbjct: 190 AHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 249
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV + AG+ G + T
Sbjct: 250 KGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAFSVARAGQKGYHHRTEI 306
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 307 NKKIYKI 313
>gi|156544034|ref|XP_001600115.1| PREDICTED: similar to ribosomal protein L3 [Nasonia vitripennis]
Length = 419
Score = 61.6 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 42/250 (16%), Positives = 67/250 (26%), Gaps = 70/250 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT V + G ++ VT+L VV
Sbjct: 44 TAFIGYKAGMTHVVREADRPGSKVNKKEIVEAVTILETPPMIVVGVVGYIETPHGLRALT 103
Query: 39 ------------RTLDKNGYMAVQVGAGEAKVKNVSK----PMRGFFSSVNVSPKKKLFE 82
R KN Y + + +A K + F + K
Sbjct: 104 TVWAEHLSEDCRRRFYKNWYKSKKKAFTKASKKWQDDLGRASIEKDFKKIVKYCKVVRVI 163
Query: 83 FRVQKD---------------------------DDLLPVGSVFSPSYFTVGQLVDVTGMT 115
Q S+ + F +++DV G+T
Sbjct: 164 AHTQMKLLRQRQKKAHIMEIQVNGGTIEDKVKWAREHLEKSIPVNNVFAPDEMIDVIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV AG+ G + T
Sbjct: 224 KGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVSFTVARAGQKGYHHRTEM 280
Query: 176 NLEVVSVDDK 185
N ++ + +
Sbjct: 281 NKKIYRIGQE 290
>gi|126339540|ref|XP_001366844.1| PREDICTED: hypothetical protein [Monodelphis domestica]
Length = 476
Score = 61.6 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 47/311 (15%), Positives = 81/311 (26%), Gaps = 108/311 (34%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ VT++ +V
Sbjct: 117 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVQTPRGLRSFK 176
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ D +G ++ K +
Sbjct: 177 TIFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDDDGKKQLEKDFNSMKKYCQVIRVI 236
Query: 67 GFFSSVNVS---PKKKLFEFRVQKD--------DDLLPVGSVFSPSYFTVGQLVDVTGMT 115
+ K L E +V V + F +++DV G+T
Sbjct: 237 AHTQMRLLPLRQKKSHLMEIQVNGGNVSEKLDWAREKLEQQVPVSTVFGQDEMIDVIGVT 296
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV + AG+ G + T
Sbjct: 297 KGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAFSVARAGQKGYHHRTEI 353
Query: 176 NLEVVSV-------------------------------------DDKRGLILVKGCVPGA 198
N ++ + + I++KGCV G
Sbjct: 354 NKKIYKIGQGYQIKDGKLIKNNASTDYDLSDKSINPLGGFVHYGEVTNDFIMLKGCVVGT 413
Query: 199 KKNSWILVRDS 209
KK + +R S
Sbjct: 414 KKR-VLTLRKS 423
>gi|70909601|emb|CAJ17226.1| ribosomal protein L3e [Scarabaeus laticollis]
Length = 410
Score = 61.6 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 49/311 (15%), Positives = 78/311 (25%), Gaps = 108/311 (34%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT V + G +I VT+L +V
Sbjct: 44 TAFIGYKAGMTHVLREADRPGSKINKKEIVEAVTILETPPMVIVGVVGYIETPHGLRALA 103
Query: 39 ------------RTLDKNGYMAVQVGAGEAKVKN-------------------------V 61
R KN Y + + +A K +
Sbjct: 104 TVWAEHLSEDCRRRFYKNWYKSKKKAFTKASKKWQDELGKKSIERDLKKIVKYCKVVRVI 163
Query: 62 SKPMRGFFSSVNVSPKKKLFEFRVQKDDD------LLPVGSVFSPSYFTVGQLVDVTGMT 115
+ + DD + + F +++D G+T
Sbjct: 164 AHTQMKLLKQRQKKAHIMEIQLNGGTIDDKVKWAREHLEKPIPVNNVFAQDEMIDCIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV AG+ G + T
Sbjct: 224 KGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVSFTVARAGQKGYHHRTEM 280
Query: 176 NLEVVSV-------------------------------------DDKRGLILVKGCVPGA 198
N ++ + + I++KGC G
Sbjct: 281 NKKIYRIGAGIHTKDGKVIKNNASTQYDLTEKTITPMGGFPHYGEVNNDFIMIKGCCMGP 340
Query: 199 KKNSWILVRDS 209
KK I +R S
Sbjct: 341 KKR-VITLRKS 350
>gi|149585070|ref|XP_001514408.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
Length = 506
Score = 61.6 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 37/247 (14%), Positives = 66/247 (26%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ VT++ +V
Sbjct: 147 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVQTPRGLRTFK 206
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ D+ G ++ K +
Sbjct: 207 TIFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEEGKKQLEKDFNSMKKYCQVIRVI 266
Query: 67 GFFSSVNVS---PKKKLFEFRVQKD--------DDLLPVGSVFSPSYFTVGQLVDVTGMT 115
+ K L E +V V + F +++DV G+T
Sbjct: 267 AHTQMRVLPLRQKKSHLMEIQVNGGSIAEKVDWAREKLEQQVPVATVFGQDEMIDVIGVT 326
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV + AG+ G + T
Sbjct: 327 KGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAFSVARAGQKGYHHRTEI 383
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 384 NKKIYKI 390
>gi|297739519|emb|CBI29701.3| unnamed protein product [Vitis vinifera]
Length = 389
Score = 61.6 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 63/215 (29%), Gaps = 47/215 (21%)
Query: 38 HRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFS----SVNVSPKKKLFEFRVQKDD---- 89
+ ++G +Q + K + K L E +V D
Sbjct: 135 KKYESEDGKKDIQAQLEKMKKYCNVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGDVAKK 194
Query: 90 ----DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSH 145
+ + F +++D+ G+T GKG+ G + R L R
Sbjct: 195 VDYAYGFFEKQIPIDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKV 252
Query: 146 GSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV----------------------- 182
G P RV AG+ G + T N ++ V
Sbjct: 253 ACIG-AWHPARVSFTVARAGQNGYHHRTEMNKKIYKVGKTGQESHSAMTEFDRTEKDITP 311
Query: 183 --------DDKRGLILVKGCVPGAKKNSWILVRDS 209
K +L+KGC G KK + +R S
Sbjct: 312 MGGFPHYGVVKDDYLLIKGCCVGPKKR-VVTLRQS 345
>gi|255566636|ref|XP_002524302.1| 60S ribosomal protein L3, putative [Ricinus communis]
gi|223536393|gb|EEF38042.1| 60S ribosomal protein L3, putative [Ricinus communis]
Length = 389
Score = 61.6 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 46/306 (15%), Positives = 79/306 (25%), Gaps = 103/306 (33%)
Query: 3 SGVVARKLGMTCVYNI---EGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + G ++ VT++ +V
Sbjct: 44 TAFLGYKAGMTHIMREVEKPGSKLHKKETCEAVTIIETPPMVIVGVVGYVKTPRGLRSLN 103
Query: 39 --------------------RTLDK------------NGYMAVQVGAGEAKVKNVSKPMR 66
++ K G ++Q + K +
Sbjct: 104 TVWAQHLSEEVKRRFYKNWCKSKKKAFTKYSRQLETEEGKKSIQAQLEKMKKYATVIRVL 163
Query: 67 GFFS----SVNVSPKKKLFEFRVQKD--------DDLLPVGSVFSPSYFTVGQLVDVTGM 114
K L E +V V + F +++D+ G+
Sbjct: 164 AHTQIRKMKGLKQKKAHLMEIQVNGGTIAQKVDFAYGFFEKQVPIDAVFQKDEMIDIIGV 223
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
T GKG+ G + R L R G P RV AG+ G + T
Sbjct: 224 TKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSFTVARAGQNGYHHRTE 280
Query: 175 KNLEVVSV-------------------------------DDKRGLILVKGCVPGAKKNSW 203
N ++ + K +++KGC G KK
Sbjct: 281 MNKKIYKLGKGGQESHTAITEYDRTEKDITPIGGFPHYGVVKDDYLMIKGCCVGPKKR-V 339
Query: 204 ILVRDS 209
+ +R S
Sbjct: 340 VTLRQS 345
>gi|224066623|ref|XP_002302168.1| predicted protein [Populus trichocarpa]
gi|118483469|gb|ABK93633.1| unknown [Populus trichocarpa]
gi|222843894|gb|EEE81441.1| predicted protein [Populus trichocarpa]
Length = 389
Score = 61.6 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 44/306 (14%), Positives = 79/306 (25%), Gaps = 103/306 (33%)
Query: 3 SGVVARKLGMTCVYNI---EGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + G ++ VT++ +V
Sbjct: 44 TAFLGYKAGMTHIVREVEKPGSKLHKKETCEAVTIIETPPMVIVGVVGYLKTPSGLRTLN 103
Query: 39 -------------------------------RTLDKN-GYMAVQVGAGEAKVKNVSKPMR 66
+ + + G ++Q + K +
Sbjct: 104 TVWAQHLSEEVKRRFYKNWCKSKKRAFNKYSKQYETDEGKKSIQSQLEKLKKYATVIRVL 163
Query: 67 GFFS----SVNVSPKKKLFEFRVQKD--------DDLLPVGSVFSPSYFTVGQLVDVTGM 114
K L E +V V + F +++D+ G+
Sbjct: 164 AHTQIRKMKGLKQKKAHLMEIQVNGGTIAQKVDFAYGFFEKQVPIDAVFQKDEMIDIIGV 223
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
T GKG+ G + R L R G P RV AG+ G + T
Sbjct: 224 TKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSFTVARAGQNGYHHRTE 280
Query: 175 KNLEVVSV-------------------------------DDKRGLILVKGCVPGAKKNSW 203
N ++ + K +++KGC G KK
Sbjct: 281 LNKKIYKLGKTGQECHTAITEYDRTEKDITPIGGFPHYGVVKDDYLMIKGCCVGPKKR-V 339
Query: 204 ILVRDS 209
+ +R +
Sbjct: 340 VTLRQT 345
>gi|157874311|ref|XP_001685639.1| ribosomal protein l3 [Leishmania major strain Friedlin]
gi|157876054|ref|XP_001686391.1| ribosomal protein l3 [Leishmania major strain Friedlin]
gi|157876056|ref|XP_001686392.1| ribosomal protein l3 [Leishmania major strain Friedlin]
gi|157876058|ref|XP_001686393.1| ribosomal protein l3 [Leishmania major strain Friedlin]
gi|157876060|ref|XP_001686394.1| ribosomal protein l3 [Leishmania major strain Friedlin]
gi|66476128|gb|AAY51372.1| ribosomal protein L3 [Leishmania major]
gi|68128711|emb|CAJ08844.1| putative ribosomal protein L3 [Leishmania major strain Friedlin]
gi|68129465|emb|CAJ08008.1| putative ribosomal protein L3 [Leishmania major strain Friedlin]
gi|68129466|emb|CAJ08009.1| putative ribosomal protein L3 [Leishmania major strain Friedlin]
gi|68129467|emb|CAJ08010.1| putative ribosomal protein L3 [Leishmania major strain Friedlin]
gi|68129468|emb|CAJ08011.1| putative ribosomal protein L3 [Leishmania major strain Friedlin]
Length = 419
Score = 61.6 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 45/299 (15%), Positives = 73/299 (24%), Gaps = 105/299 (35%)
Query: 5 VVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQV----------VVHRTLD-- 42
+ K GMT + + G ++ PVT+L + V +T+
Sbjct: 46 FMVFKAGMTHIVRDVDRPGSKVNKKEVVEPVTILEAPPMVIVGIVGYRQTPVGLKTIGTV 105
Query: 43 --------------KNGYMAVQVGAGEAKVKNVS-------------------------K 63
KN + Q+ K +
Sbjct: 106 WAHHTSVEFRRRYYKNWKQSAQLAFSRQKQFANTKEGKVAEARTLNAFAKKASVIRVIAH 165
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDD---------LLPVGSVFSPSYFTVGQLVDVTGM 114
+ V KK + L V S F + DV +
Sbjct: 166 TQLRKLRNHRVGVKKAHVQEIQVNGGSVAAKIALAKSLLEKEVRVDSVFQQSEACDVCSV 225
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
T G G G +KR L R G P RV AG+ G + T
Sbjct: 226 TKGHGTEGVVKRWGVACLP--RKTHRGLRKVACIG-AWHPARVMYTVARAGQHGYHHRTQ 282
Query: 175 KNLEVVSV--------------------------------DDKRGLILVKGCVPGAKKN 201
N ++ + + +++KG V G ++
Sbjct: 283 LNKKIYQIGRSVAVEPNQATTTYDLTAKTITPMGGFVGYGTVRNDYVMLKGSVSGPRRR 341
>gi|225706512|gb|ACO09102.1| 60S ribosomal protein L3 [Osmerus mordax]
Length = 403
Score = 61.2 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 39/247 (15%), Positives = 67/247 (27%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ VT++ VV
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMIVVGVVGYVETPRGLRSFK 103
Query: 39 ------------RTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQ 86
R +N Y + + + K + S KK R+
Sbjct: 104 TIFAEHVSDECKRRFYRNWYKSKKKAFTKYCKKWQDDEGKKQLEKDFASMKKYCQVVRIL 163
Query: 87 KD-------------------------------DDLLPVGSVFSPSYFTVGQLVDVTGMT 115
+V + FT +++DV G+T
Sbjct: 164 AHTQMRLLPLRQKKSHLMEVQLNGGSIADKVDWAREKLEQAVPIANVFTQDEMIDVIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
G G+ G R + L R G P RV + AG+ G + T
Sbjct: 224 KGHGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAFSVARAGQKGYHHRTEI 280
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 281 NKKIYKI 287
>gi|241859209|ref|XP_002416193.1| ribosomal protein L3, putative [Ixodes scapularis]
gi|215510407|gb|EEC19860.1| ribosomal protein L3, putative [Ixodes scapularis]
Length = 390
Score = 61.2 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 53/311 (17%), Positives = 81/311 (26%), Gaps = 108/311 (34%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVV--------------- 37
+ + K GMT + + G ++ PVT+L + +V
Sbjct: 31 TAFLGFKAGMTHIVREVDKPGSKVNKKEVVEPVTILEVPPMMIVGLVGYIETPKGLRAFK 90
Query: 38 -----------HRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQ 86
R KN Y + + ++ K + KK RV
Sbjct: 91 TVWAEHLSEECRRRFYKNWYKSKKKAFTKSSKKWQEDLGKQEIERDLKKMKKYCKVIRVL 150
Query: 87 KD-------------------------------DDLLPVGSVFSPSYFTVGQLVDVTGMT 115
V F +++DV G+T
Sbjct: 151 AHTQMKLMRRRQKKAHIMEIQVNGGSVGAKIKWAREHLEKPVTVSQVFAQDEMIDVIGVT 210
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKGF G R + L R G P RV AG+ G + T
Sbjct: 211 KGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVQFTVARAGQKGYHHRTEI 267
Query: 176 NLEVVSV--------------------DDKR-----------------GLILVKGCVPGA 198
N ++ + D I++KGC+ G
Sbjct: 268 NKKIYRIGQGVHKKDGKLVVNNAATDYDTSNKSITPMGGFPHYGEVNCDYIMLKGCIMGP 327
Query: 199 KKNSWILVRDS 209
KK I +R S
Sbjct: 328 KKR-IITLRKS 337
>gi|312215801|emb|CBX95753.1| similar to 60S ribosomal protein L3 [Leptosphaeria maculans]
Length = 392
Score = 61.2 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 47/139 (33%), Gaps = 34/139 (24%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
S F +++DV +T GKG++G R L R G P V
Sbjct: 208 SIFEANEMIDVIAVTKGKGYNGVTSRWGTKKLP--RKTHKGLRKVACIG-AWHPAHVQWT 264
Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
AG+MG + T N ++ + + K +L
Sbjct: 265 VARAGQMGYHHRTSVNHKIYRIGKGEDEGNASTEFDVSKKQITPMGGFVRYGEVKNDFLL 324
Query: 191 VKGCVPGAKKNSWILVRDS 209
+KG PG KK + +R S
Sbjct: 325 LKGNCPGVKKR-VMTLRKS 342
>gi|324517742|gb|ADY46908.1| 60S ribosomal protein L3 [Ascaris suum]
Length = 402
Score = 61.2 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 38/246 (15%), Positives = 66/246 (26%), Gaps = 70/246 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ VT+L +V
Sbjct: 44 TAFIGFKAGMTHIVREVDKPGSKVNKKEVVEAVTILETPPMVIVGIVGYIDTPRGPRQFK 103
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ D++G +++ + K +
Sbjct: 104 TVWAEHLSEDCRRRFYKNWHTSKKKAFQKHAKKWQDEDGRKSIESDLNKMKKYCSKIRVI 163
Query: 67 GFFSSV---NVSPKKKLFEFRVQKD--------DDLLPVGSVFSPSYFTVGQLVDVTGMT 115
+ K + E +V V S F +++D G+T
Sbjct: 164 AHTQMKVMKHREKKAHIMEIQVNGGTVPEKVDWAKEHLEKQVAVDSVFAQDEMIDCIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKGF G R + L R G P RV AG+ G + T
Sbjct: 224 KGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVQFTVARAGQKGYHHRTEV 280
Query: 176 NLEVVS 181
N ++
Sbjct: 281 NKKIYR 286
>gi|168060915|ref|XP_001782438.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666109|gb|EDQ52773.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 392
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 53/312 (16%), Positives = 83/312 (26%), Gaps = 104/312 (33%)
Query: 5 VVARKLGMTCVYNI---EGRRI-------PVTVLHLDNCQVVV----HRTLD-------- 42
+ K GMT + G ++ VT++ VV +T
Sbjct: 46 FLGYKAGMTHIVREVEKPGSKLHKKETCEAVTIVETPPIIVVGLVAYIKTPRGLRSLNTV 105
Query: 43 --------------KNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRV--- 85
KN Y + + + + S+ + S KK RV
Sbjct: 106 WAQHLSDEVKRRFYKNWYKSKKKAFSKYSKRYESEEGKRDLQSELERMKKYASVIRVLAH 165
Query: 86 -----------------------------QKDDDLLPVGSVFSPSYFTVGQLVDVTGMTI 116
L V + F +++D+ G+T
Sbjct: 166 TQVRKLKGIKQKKAHLAEIQVNGGTIAEKVDFGYNLFEKPVPVDAVFNKDEMIDIIGVTR 225
Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
G G+ G + R L R G P RV AG+ G + T N
Sbjct: 226 GHGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSFTVARAGQNGYHHRTEMN 282
Query: 177 LEVVSV----DDK----------------------------RGLILVKGCVPGAKKNSWI 204
+V V D + +++KG V G KK I
Sbjct: 283 KKVYKVGKSADKESFSASTEFDVTEKEITPMGGFAHYGIVREDYLMIKGGVMGPKKR-VI 341
Query: 205 LVRDSFKSAVNC 216
+R S V+
Sbjct: 342 TLRQSLYKQVSR 353
>gi|14250148|gb|AAH08492.1| Ribosomal protein L3 [Homo sapiens]
Length = 403
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/247 (14%), Positives = 66/247 (26%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ VT++ VV
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFK 103
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ D++G ++ K +
Sbjct: 104 TVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVI 163
Query: 67 GF---------FSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMT 115
++ + +K D V F +++DV G+T
Sbjct: 164 AHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV + AG+ G + T
Sbjct: 224 KGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAFSVARAGQKGYHHRTEI 280
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 281 NKKIYKI 287
>gi|337580|gb|AAA60291.1| ribosomal protein L3 [Homo sapiens]
Length = 398
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/247 (14%), Positives = 66/247 (26%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ VT++ VV
Sbjct: 39 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFK 98
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ D++G ++ K +
Sbjct: 99 TVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVI 158
Query: 67 GF---------FSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMT 115
++ + +K D V F +++DV G+T
Sbjct: 159 AHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 218
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV + AG+ G + T
Sbjct: 219 KGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAFSVARAGQKGYHHRTEI 275
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 276 NKKIYKI 282
>gi|37625023|gb|AAQ96335.1| ribosomal protein L3A [Nicotiana tabacum]
Length = 389
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 47/306 (15%), Positives = 76/306 (24%), Gaps = 103/306 (33%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + G ++ VT++ +V
Sbjct: 44 TAFLGYKAGMTHIVRDVEKPGSKLHKKETCEAVTIIETPPMVIVGVVGYVKTPRGLRCLN 103
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ G +Q + K +
Sbjct: 104 TVWAQHLSEELKRRFYKNWCKSKKKAFLKYSKKYESDEGKKDIQTQLEKLKKYACVIRVL 163
Query: 67 GFFS----SVNVSPKKKLFEFRVQKD--------DDLLPVGSVFSPSYFTVGQLVDVTGM 114
K L E +V V + F +++D+ G+
Sbjct: 164 AHTQIRKMKGLKQKKAHLMEIQVNGGTIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGV 223
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
T GKG+ G + R L R G P RV AG+ G + T
Sbjct: 224 TKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSYTVARAGQNGYHHRTE 280
Query: 175 KNLEVVSV-------------------------------DDKRGLILVKGCVPGAKKNSW 203
N +V + K +L+KGC G KK
Sbjct: 281 MNKKVYKLGKAGQESHAAVTDFDRTEKDITPMGGFPHYGVVKDDYLLIKGCCVGPKKR-V 339
Query: 204 ILVRDS 209
+ +R S
Sbjct: 340 VTLRQS 345
>gi|147865994|emb|CAN83050.1| hypothetical protein VITISV_042376 [Vitis vinifera]
Length = 389
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 63/215 (29%), Gaps = 47/215 (21%)
Query: 38 HRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFS----SVNVSPKKKLFEFRVQKDD---- 89
+ ++G +Q + K + K L E +V D
Sbjct: 135 KKYESEDGKKDIQAQLEKMKKYCNVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGDVAKK 194
Query: 90 ----DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSH 145
+ + F +++D+ G+T GKG+ G + R L R
Sbjct: 195 VDYAYGFFEKQIPIDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKV 252
Query: 146 GSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV----------------------- 182
G P RV AG+ G + T N ++ V
Sbjct: 253 ACIG-AWHPARVSFTVARAGQNGYHHRTEMNKKIYKVGKTGQESHSAMTEFDRTEKDITP 311
Query: 183 --------DDKRGLILVKGCVPGAKKNSWILVRDS 209
K +L+KGC G KK + +R S
Sbjct: 312 MGGFPHYGVVKDDYLLIKGCCVGPKKR-VVTLRQS 345
>gi|47217938|emb|CAG02221.1| unnamed protein product [Tetraodon nigroviridis]
Length = 402
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/248 (15%), Positives = 66/248 (26%), Gaps = 70/248 (28%)
Query: 2 RSGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH------------- 38
+ + K GMT + + G ++ VT++ V+
Sbjct: 42 MTAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMIVIGVVGYVNTPSGLRSF 101
Query: 39 -------------RTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRV 85
R KN Y + + + K + KK RV
Sbjct: 102 KTIFAEHISDECKRRFYKNWYKSKKKAFTKYCKKWQDDEGKKQLEKDFALMKKYCQVIRV 161
Query: 86 ------------------------------QKDDDLLPVGSVFSPS-YFTVGQLVDVTGM 114
+ D + + F +++DV G+
Sbjct: 162 ITHTQMRLLPIRQKKSHLMEVQLNGGTIADKVDWAREKLEQSIPVNTVFAQDEMIDVIGV 221
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
T G G+ G R + L R G P RV + AG+ G + T
Sbjct: 222 TKGHGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAFSVARAGQKGYHHRTE 278
Query: 175 KNLEVVSV 182
N ++ +
Sbjct: 279 INKKIYKI 286
>gi|254693009|gb|ACT79354.1| LP14077p [Drosophila melanogaster]
Length = 418
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/245 (17%), Positives = 63/245 (25%), Gaps = 70/245 (28%)
Query: 5 VVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVV------------------ 36
+ K GMT + + G +I VTVL VV
Sbjct: 48 FIGYKAGMTHIVREADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNV 107
Query: 37 --VHRTLD------KNGYMAVQVGAGEAKVKNVSK----PMRGFFSSVNVSPKKKLFEFR 84
H + + KN Y + + +A K + F + K
Sbjct: 108 WAQHLSEECRRRFYKNWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAH 167
Query: 85 VQKDDDLLPVGSVFSPS---------------------------YFTVGQLVDVTGMTIG 117
Q F +++D G+T G
Sbjct: 168 SQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKG 227
Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
KGF G R + L R G P RV AG+ G + T N
Sbjct: 228 KGFKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVSTTVARAGQKGYHHRTEINK 284
Query: 178 EVVSV 182
++ +
Sbjct: 285 KIYRI 289
>gi|60654345|gb|AAX29863.1| ribosomal protein L3 [synthetic construct]
Length = 404
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/247 (14%), Positives = 66/247 (26%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ VT++ VV
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFK 103
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ D++G ++ K +
Sbjct: 104 TVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVI 163
Query: 67 GF---------FSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMT 115
++ + +K D V F +++DV G+T
Sbjct: 164 AHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV + AG+ G + T
Sbjct: 224 KGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAFSVARAGQKGYHHRTEI 280
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 281 NKKIYKI 287
>gi|221116204|ref|XP_002167181.1| PREDICTED: similar to Ribosomal protein L3 CG4863-PA [Hydra
magnipapillata]
gi|221117552|ref|XP_002159678.1| PREDICTED: similar to ribosomal protein L3e [Hydra magnipapillata]
Length = 403
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 47/321 (14%), Positives = 81/321 (25%), Gaps = 108/321 (33%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+G + K GMT + + G ++ VT+L +V
Sbjct: 44 TGFIGFKAGMTHIVREVDRVGSKVHKKEVVEAVTILETPPIVIVGIVGYVETPRGLRQLT 103
Query: 39 ------------RTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRV- 85
R KN Y + ++ K + + K RV
Sbjct: 104 TVWAEHLSDECKRRFYKNWYKSKHKAFTKSSKKWTDENGKKSIERDLEKMIKYCKVIRVL 163
Query: 86 ------------------------------QKDDDLLPVGSVFSPSYFTVGQLVDVTGMT 115
++ + F +++D G+T
Sbjct: 164 VHTQQRLVGLKQKKAHIMEIQINGGKIVDKVNWAKNHLEKTISVSNVFGQDEMIDAIGIT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
G GF G R L R G P R+ AG+ G + +
Sbjct: 224 KGHGFKGVTYRWGTKKLP--RKTHKGLRKVACVG-AWHPARIGFTVPRAGQCGYHHRVER 280
Query: 176 NLEVVSV----------DDKRG---------------------------LILVKGCVPGA 198
N ++ + K +++KG +PG
Sbjct: 281 NKKIYRIGRGIHTKDNKVVKNNASTDYDLTEKTITPMGGFPHYGEVTEDFLMLKGAIPGP 340
Query: 199 KKNSWILVRDSFKSAVNCKGK 219
KK I +R S + + K
Sbjct: 341 KKR-VISLRKSLLAQTSRKAN 360
>gi|189204215|ref|XP_001938443.1| 60S ribosomal protein L3 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187985542|gb|EDU51030.1| 60S ribosomal protein L3 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 392
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 46/139 (33%), Gaps = 34/139 (24%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
S F +++DV +T G G++G R L R G P V
Sbjct: 208 SIFEANEMIDVIAVTKGHGYNGVTSRWGTKKLP--RKTHKGLRKVACIG-AWHPAHVQWT 264
Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
AG+MG + T N ++ + + K +L
Sbjct: 265 VARAGQMGYHHRTSVNHKIYRIGKADDEGNASTEFDVSKKRITPMGGFVRYGEVKNDFVL 324
Query: 191 VKGCVPGAKKNSWILVRDS 209
+KG PG KK + +R S
Sbjct: 325 LKGNCPGVKKR-VMTLRKS 342
>gi|146097010|ref|XP_001468006.1| ribosomal protein l3 [Leishmania infantum JPCM5]
gi|134072372|emb|CAM71080.1| putative ribosomal protein L3 [Leishmania infantum JPCM5]
Length = 419
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 45/299 (15%), Positives = 73/299 (24%), Gaps = 105/299 (35%)
Query: 5 VVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQV----------VVHRTLD-- 42
+ K GMT + + G ++ PVT+L + V +T+
Sbjct: 46 FMVFKAGMTHIVRDVDRPGSKVNKKEVVEPVTILEAPPMVIVGIVGYRQTPVGLKTIGTV 105
Query: 43 --------------KNGYMAVQVGAGEAKVKNVS-------------------------K 63
KN + Q+ K +
Sbjct: 106 WAHHTSVEFRRRYYKNWKQSAQLAFSRQKQFANTKEGKVAEARTLNAFAKKASVIRVIAH 165
Query: 64 PMRGFFSSVNVSPKKKLFEFRVQKDDD---------LLPVGSVFSPSYFTVGQLVDVTGM 114
+ V KK + L V S F + DV +
Sbjct: 166 TQLRKLRNHRVGVKKAHVQEIQVNGGSVAAKIALAKSLLEKEVRVDSVFQQSEACDVCSV 225
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
T G G G +KR L R G P RV AG+ G + T
Sbjct: 226 TKGHGTEGVVKRWGVACLP--RKTHRGLRKVACIG-AWHPARVMYTVARAGQHGYHHRTQ 282
Query: 175 KNLEVVSV--------------------------------DDKRGLILVKGCVPGAKKN 201
N ++ + + +++KG V G ++
Sbjct: 283 LNKKIYQIGRSVAVEPNQATTTYDLTAKTITPMGGFVGYGTVRNDYVMLKGSVSGPRRR 341
>gi|17737907|ref|NP_524316.1| ribosomal protein L3, isoform A [Drosophila melanogaster]
gi|195571809|ref|XP_002103895.1| GD18739 [Drosophila simulans]
gi|3122718|sp|O16797|RL3_DROME RecName: Full=60S ribosomal protein L3
gi|2384754|gb|AAC26144.1| ribosomal protein L3 [Drosophila melanogaster]
gi|23170971|gb|AAF54610.2| ribosomal protein L3, isoform A [Drosophila melanogaster]
gi|194199822|gb|EDX13398.1| GD18739 [Drosophila simulans]
Length = 416
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 42/245 (17%), Positives = 63/245 (25%), Gaps = 70/245 (28%)
Query: 5 VVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVV------------------ 36
+ K GMT + + G +I VTVL VV
Sbjct: 46 FIGYKAGMTHIVREADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNV 105
Query: 37 --VHRTLD------KNGYMAVQVGAGEAKVKNVSK----PMRGFFSSVNVSPKKKLFEFR 84
H + + KN Y + + +A K + F + K
Sbjct: 106 WAQHLSEECRRRFYKNWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAH 165
Query: 85 VQKDDDLLPVGSVFSPS---------------------------YFTVGQLVDVTGMTIG 117
Q F +++D G+T G
Sbjct: 166 SQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKG 225
Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
KGF G R + L R G P RV AG+ G + T N
Sbjct: 226 KGFKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVSTTVARAGQKGYHHRTEINK 282
Query: 178 EVVSV 182
++ +
Sbjct: 283 KIYRI 287
>gi|75076108|sp|Q4R5Q0|RL3_MACFA RecName: Full=60S ribosomal protein L3
gi|67970465|dbj|BAE01575.1| unnamed protein product [Macaca fascicularis]
Length = 403
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/247 (14%), Positives = 66/247 (26%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVY----------NIEGRRIPVTVLHLDNCQVVVH-------------- 38
+ + K GMT + N + + VT++ VV
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVVAVTIVETPPMVVVGIVGYVETPRGLRTFK 103
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ D++G ++ K +
Sbjct: 104 TVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVI 163
Query: 67 GF---------FSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMT 115
++ + +K D V F +++DV G+T
Sbjct: 164 AHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G R P RV + AG+ G + T
Sbjct: 224 KGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIGAR-HPARVAFSVARAGQKGYHHRTEI 280
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 281 NKKIYKI 287
>gi|18606060|gb|AAH22790.1| Unknown (protein for IMAGE:3538792) [Homo sapiens]
Length = 374
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/247 (14%), Positives = 66/247 (26%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ VT++ VV
Sbjct: 15 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFK 74
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ D++G ++ K +
Sbjct: 75 TVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVI 134
Query: 67 GF---------FSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMT 115
++ + +K D V F +++DV G+T
Sbjct: 135 AHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 194
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV + AG+ G + T
Sbjct: 195 KGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAFSVARAGQKGYHHRTEI 251
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 252 NKKIYKI 258
>gi|4506649|ref|NP_000958.1| 60S ribosomal protein L3 isoform a [Homo sapiens]
gi|302148475|ref|NP_001180483.1| ribosomal protein L3 [Macaca mulatta]
gi|297708927|ref|XP_002831202.1| PREDICTED: 60S ribosomal protein L3-like [Pongo abelii]
gi|730565|sp|P39023|RL3_HUMAN RecName: Full=60S ribosomal protein L3; AltName: Full=HIV-1 TAR
RNA-binding protein B; Short=TARBP-B
gi|313659|emb|CAA51839.1| ribosomal protein L3 [Homo sapiens]
gi|3850177|emb|CAA18450.1| ribosomal protein L3 [Homo sapiens]
gi|12803201|gb|AAH02408.1| Ribosomal protein L3 [Homo sapiens]
gi|13623709|gb|AAH06483.1| Ribosomal protein L3, isoform a [Homo sapiens]
gi|14124954|gb|AAH08003.1| Ribosomal protein L3 [Homo sapiens]
gi|15082461|gb|AAH12146.1| Ribosomal protein L3 [Homo sapiens]
gi|15215372|gb|AAH12786.1| Ribosomal protein L3 [Homo sapiens]
gi|15489128|gb|AAH13674.1| Ribosomal protein L3 [Homo sapiens]
gi|15559314|gb|AAH14017.1| Ribosomal protein L3 [Homo sapiens]
gi|15929157|gb|AAH15032.1| Ribosomal protein L3, isoform a [Homo sapiens]
gi|16041773|gb|AAH15767.1| Ribosomal protein L3 [Homo sapiens]
gi|21104408|dbj|BAB93474.1| ribosomal protein L3 [Homo sapiens]
gi|39794638|gb|AAH63662.1| Ribosomal protein L3 [Homo sapiens]
gi|47678663|emb|CAG30452.1| RPL3 [Homo sapiens]
gi|56972440|gb|AAH88373.1| Ribosomal protein L3 [Homo sapiens]
gi|78395076|gb|AAI07712.1| Ribosomal protein L3 [Homo sapiens]
gi|90075246|dbj|BAE87303.1| unnamed protein product [Macaca fascicularis]
gi|90076620|dbj|BAE87990.1| unnamed protein product [Macaca fascicularis]
gi|90076640|dbj|BAE88000.1| unnamed protein product [Macaca fascicularis]
gi|109451472|emb|CAK54597.1| RPL3 [synthetic construct]
gi|109452068|emb|CAK54896.1| RPL3 [synthetic construct]
gi|119580714|gb|EAW60310.1| ribosomal protein L3, isoform CRA_a [Homo sapiens]
gi|189055072|dbj|BAG38056.1| unnamed protein product [Homo sapiens]
gi|261859736|dbj|BAI46390.1| ribosomal protein L3 [synthetic construct]
Length = 403
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/247 (14%), Positives = 66/247 (26%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ VT++ VV
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFK 103
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ D++G ++ K +
Sbjct: 104 TVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVI 163
Query: 67 GF---------FSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMT 115
++ + +K D V F +++DV G+T
Sbjct: 164 AHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV + AG+ G + T
Sbjct: 224 KGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAFSVARAGQKGYHHRTEI 280
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 281 NKKIYKI 287
>gi|296236921|ref|XP_002763538.1| PREDICTED: 60S ribosomal protein L3-like isoform 1 [Callithrix
jacchus]
Length = 403
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/247 (14%), Positives = 66/247 (26%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ VT++ VV
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFK 103
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ D++G ++ K +
Sbjct: 104 TVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVI 163
Query: 67 GF---------FSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMT 115
++ + +K D V F +++DV G+T
Sbjct: 164 AHTQMRLLPLRQKKAHLMEIQVNGGTVSEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV + AG+ G + T
Sbjct: 224 KGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAFSVARAGQKGYHHRTEI 280
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 281 NKKIYKI 287
>gi|73973638|ref|XP_868310.1| PREDICTED: similar to 60S ribosomal protein L3 (L4) isoform 9
[Canis familiaris]
Length = 331
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/247 (14%), Positives = 65/247 (26%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ VT++ VV
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFK 103
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ D +G ++ K +
Sbjct: 104 TIFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDDDGKKQLEKDFNSMKKYCQVIRVI 163
Query: 67 GF---------FSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMT 115
++ + +K D V F +++DV G+T
Sbjct: 164 AHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV + AG+ G + T
Sbjct: 224 KGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAFSMARAGQKGYHHRTEI 280
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 281 NKKIYKI 287
>gi|195499987|ref|XP_002097183.1| GE26079 [Drosophila yakuba]
gi|194183284|gb|EDW96895.1| GE26079 [Drosophila yakuba]
Length = 416
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 43/245 (17%), Positives = 64/245 (26%), Gaps = 70/245 (28%)
Query: 5 VVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVV------------------ 36
+ K GMT + + G +I VTVL VV
Sbjct: 46 FIGYKAGMTHIVREADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNV 105
Query: 37 --VHRTLD------KNGYMAVQVGAGEAKVKNV----SKPMRGFFSSVNVSPKKKLFEFR 84
H + + KN Y + + +A K K + F + K
Sbjct: 106 WAQHLSEECRRRFYKNWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAH 165
Query: 85 VQKDDDLLPVGSVFSPS---------------------------YFTVGQLVDVTGMTIG 117
Q F +++D G+T G
Sbjct: 166 SQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKG 225
Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
KGF G R + L R G P RV AG+ G + T N
Sbjct: 226 KGFKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVSTTVARAGQKGYHHRTEINK 282
Query: 178 EVVSV 182
++ +
Sbjct: 283 KIYRI 287
>gi|78190647|gb|ABB29645.1| ribosomal protein 3 large subunit [Suberites fuscus]
Length = 313
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 40/221 (18%), Positives = 67/221 (30%), Gaps = 46/221 (20%)
Query: 41 LDKNGYMAVQVGAGEAKVKNVSKPMRGF----FSSVNVSPKKKLFEFRVQKD-------- 88
D+ G ++Q + K + + K + E +V
Sbjct: 83 KDEAGQKSIQADFDKLKKYCKVIRVICHTQVELLNGVRQKKAHIMEIQVNGGSISDKVDW 142
Query: 89 DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGST 148
++ F +++D+ G+T GKGF G R + L R
Sbjct: 143 AKEHMEKAIPIKDLFNKDEMIDIIGVTKGKGFKGVTSRWHCKKLP--RKTHKGLRKVACI 200
Query: 149 GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-DDKRG-------------------- 187
G P RV + AG+ G + T N ++ + D +
Sbjct: 201 G-AWHPSRVSFSVARAGQKGYHHRTEINKKIYRIGDKEDNANAATEFDPTEKRITPVGGF 259
Query: 188 ---------LILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
+++KG V G K I +R S V K K
Sbjct: 260 PHYGTVKNDFVMLKGAVVGP-KRRVITMRKSLVVNVTRKNK 299
>gi|194902102|ref|XP_001980590.1| GG17978 [Drosophila erecta]
gi|190652293|gb|EDV49548.1| GG17978 [Drosophila erecta]
Length = 416
Score = 60.4 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 43/245 (17%), Positives = 64/245 (26%), Gaps = 70/245 (28%)
Query: 5 VVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVV------------------ 36
+ K GMT + + G +I VTVL VV
Sbjct: 46 FIGYKAGMTHIVREADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNV 105
Query: 37 --VHRTLD------KNGYMAVQVGAGEAKVKNV----SKPMRGFFSSVNVSPKKKLFEFR 84
H + + KN Y + + +A K K + F + K
Sbjct: 106 WAQHLSEECRRRFYKNWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAH 165
Query: 85 VQKDDDLLPVGSVFSPS---------------------------YFTVGQLVDVTGMTIG 117
Q F +++D G+T G
Sbjct: 166 SQIRLIKQRQKKAHVMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKG 225
Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
KGF G R + L R G P RV AG+ G + T N
Sbjct: 226 KGFKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVSTTVARAGQKGYHHRTEINK 282
Query: 178 EVVSV 182
++ +
Sbjct: 283 KIYRI 287
>gi|198455295|ref|XP_001359937.2| GA18487 [Drosophila pseudoobscura pseudoobscura]
gi|198133184|gb|EAL29089.2| GA18487 [Drosophila pseudoobscura pseudoobscura]
Length = 412
Score = 60.4 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/245 (17%), Positives = 65/245 (26%), Gaps = 70/245 (28%)
Query: 5 VVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVV------------------ 36
+ K GMT + + G +I VTVL VV
Sbjct: 46 FIGYKAGMTHIVREADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNV 105
Query: 37 --VHRTLD------KNGYMAVQVGAGEAKVKNVSK----PMRGFFSSVNVSPKKKLFEFR 84
H + + KN Y + + + K + F + K
Sbjct: 106 WAQHLSEECRRRFYKNWYKSKKKAFTKTSKKWTDDLGKKSIENDFRKMLRYCKVIRVIAH 165
Query: 85 VQ---------------------------KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
Q K + + F +++D G+T G
Sbjct: 166 SQIRLIKQRQKKAHIMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKG 225
Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
KGF G R + L R G P RV AG+ G + T N
Sbjct: 226 KGFKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVSTTVARAGQKGYHHRTEINK 282
Query: 178 EVVSV 182
++ +
Sbjct: 283 KIYRI 287
>gi|330805639|ref|XP_003290787.1| 60S ribosomal protein L3 [Dictyostelium purpureum]
gi|325079065|gb|EGC32684.1| 60S ribosomal protein L3 [Dictyostelium purpureum]
Length = 399
Score = 60.4 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/144 (21%), Positives = 51/144 (35%), Gaps = 39/144 (27%)
Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
F+ +++DV G+T GKGF+G +KR L R G P RV
Sbjct: 211 VFSENEMIDVIGVTKGKGFNGVIKRWGVRKLP--RKTHKGLRKVACIG-AWHPSRVSTTV 267
Query: 162 KMAGRMGGNRVTVKNLEVVSV-----------------------------------DDKR 186
AG++G + +N ++ + +
Sbjct: 268 PRAGQLGYHHRVERNKKIYRIGQAQPVEGKQISTGKTEFDLTEKTINPMGGFTHYGVVDQ 327
Query: 187 GLILVKGCVPGAKKNSWILVRDSF 210
I+VKGCV G +K + +R +
Sbjct: 328 DFIMVKGCVAGPRKRAL-TLRKTI 350
Score = 35.0 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 34/122 (27%), Gaps = 18/122 (14%)
Query: 3 SGVVARKLGMTCV---YNIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
+ + K GMT + G ++ VT+L +V GY+ G
Sbjct: 44 TAFMGYKAGMTHIVRDLEKPGSKMHKKEVVEAVTILECPPMYIVGLV-----GYIETAQG 98
Query: 53 ---AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109
+++S R K K + K + S + +
Sbjct: 99 LKTYKTVWAQHLSDNFRRRLYKNWYKSKSKKAFTKYVKQYETEEGKKAIEASLQAIKKRC 158
Query: 110 DV 111
V
Sbjct: 159 SV 160
>gi|318087096|gb|ADV40140.1| putative ribosomal protein L3 isoform A [Latrodectus hesperus]
Length = 303
Score = 60.4 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/247 (16%), Positives = 64/247 (25%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ PVT+L +V
Sbjct: 44 TAFIGYKAGMTHIVREVDKPGSKVNKKEVVEPVTILETPPMVIVGVVGYIETPKGLRALK 103
Query: 39 ------------RTLDKNGYMAVQVGAGEAKVKNVSKP----MRGFFSSVNVSPKKKLFE 82
R KN Y + + + K + + F + K
Sbjct: 104 TVWAEHLSEDCKRRFYKNWYKSKKKAFTKYSKKWAEEAGRVAINKDFKKMAKYCKVIRVI 163
Query: 83 FRVQKDDDLLPVGSVFSPS---------------------------YFTVGQLVDVTGMT 115
Q F +++DV G+T
Sbjct: 164 AHTQMKLMRKRQKKAHIMEIQLNGGNISQKIKWARDHLEKPVPLSQVFAQDEMIDVIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKGF G R + L R G P RV AG+ G + T
Sbjct: 224 KGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVQFTVARAGQKGYHHRTEI 280
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 281 NKKIYRI 287
>gi|269859601|ref|XP_002649525.1| LSU ribosomal protein L3P [Enterocytozoon bieneusi H348]
gi|220067076|gb|EED44544.1| LSU ribosomal protein L3P [Enterocytozoon bieneusi H348]
Length = 329
Score = 60.4 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 50/138 (36%), Gaps = 32/138 (23%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
+ F+ + +D G+T GKGF G +KR L + R G P RV +
Sbjct: 151 NVFSKSEFLDTIGVTKGKGFQGVVKRWGTTILP--RKTNKGIRKVACIGAF-HPSRVMYS 207
Query: 161 KKMAGRMGGNRVTVKNLEVVSV----------------------------DDKRGLILVK 192
AG++G +R T +NL V + I++K
Sbjct: 208 VARAGQVGFHRRTQQNLLVYDIGNGKQPIQTDFDLTVKTINPMGGFPHYGQVTNDYIMLK 267
Query: 193 GCVPGAKKNSWILVRDSF 210
GCV G K + +R
Sbjct: 268 GCVTGPCKR-VVTLRKPV 284
>gi|82623411|gb|ABB87120.1| ribosomal protein L3-like [Solanum tuberosum]
Length = 389
Score = 60.4 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/306 (15%), Positives = 78/306 (25%), Gaps = 103/306 (33%)
Query: 3 SGVVARKLGMTCVYNI---EGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + G ++ VT++ +V
Sbjct: 44 TAFLGYKAGMTHIVREVEKPGSKLHKKETCEAVTIVETPPMVIVGVVGYVKTPRGLRCLN 103
Query: 39 -------------------------------RTLDKN-GYMAVQVGAGEAKVKNVSKPMR 66
+ + + G +Q + K +
Sbjct: 104 TVWAQHLSEDIKRRFYKNWCKSKKKAFLKYSKKYETDEGKKDIQAQLEKLKKYACVIRVL 163
Query: 67 GFFS----SVNVSPKKKLFEFRVQKD--------DDLLPVGSVFSPSYFTVGQLVDVTGM 114
K L E +V V + F +++D+ G+
Sbjct: 164 AHTQIRKMKGLKQKKAHLMEIQVNGGSIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGV 223
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
T GKG+ G + R L R G P RV AG+ G + T
Sbjct: 224 TKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSFTVARAGQNGYHHRTE 280
Query: 175 KNLEVVSV-------------------------------DDKRGLILVKGCVPGAKKNSW 203
N +V + K +L+KGC G KK
Sbjct: 281 MNKKVYKLGKVGQESHTAVTEFDRTEKEITPIGGFAHYGVVKDDYLLIKGCCVGPKKR-V 339
Query: 204 ILVRDS 209
+ +R S
Sbjct: 340 VTLRQS 345
>gi|297296032|ref|XP_001082799.2| PREDICTED: 60S ribosomal protein L3-like isoform 1 [Macaca mulatta]
Length = 403
Score = 60.4 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/248 (14%), Positives = 69/248 (27%), Gaps = 72/248 (29%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ VT++ VV
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFK 103
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ D++G ++ K +
Sbjct: 104 TVFAEHISDECKRRFCKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVI 163
Query: 67 GFFSSVNVSPKKKLFEFRVQKDDD------------LLPVGSVFSPSYFTVGQLVDVTGM 114
+ + + P ++ V+ + V F +++DV G+
Sbjct: 164 AH-TQMRLLPLRQKKAHLVEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGV 222
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
T GKG+ G R + L R G P RV + AG+ G + T
Sbjct: 223 TKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAFSVARAGQKGYHHRTE 279
Query: 175 KNLEVVSV 182
N ++ +
Sbjct: 280 INKKIYKI 287
>gi|195157752|ref|XP_002019760.1| GL12566 [Drosophila persimilis]
gi|194116351|gb|EDW38394.1| GL12566 [Drosophila persimilis]
Length = 415
Score = 60.4 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/245 (17%), Positives = 66/245 (26%), Gaps = 70/245 (28%)
Query: 5 VVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVV------------------ 36
+ K GMT + + G +I VTVL VV
Sbjct: 46 FIGYKAGMTHIVREADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNV 105
Query: 37 --VHRTLD------KNGYMAVQVGAGEAKVKNV----SKPMRGFFSSVNVSPKKKLFEFR 84
H + + KN Y + + + K K + F + K
Sbjct: 106 WAQHLSEECRRRFYKNWYKSKKKAFTKTSKKWTDDLGKKSIENDFRKMLRYCKVIRVIAH 165
Query: 85 VQ---------------------------KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIG 117
Q K + + F +++D G+T G
Sbjct: 166 SQIRLIKQRQKKAHIMEIQLNGGSIEDKVKWAREHLEKPIQVSNVFGQDEMIDCVGVTKG 225
Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
KGF G R + L R G P RV AG+ G + T N
Sbjct: 226 KGFKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVSTTVARAGQKGYHHRTEINK 282
Query: 178 EVVSV 182
++ +
Sbjct: 283 KIYRI 287
>gi|194743868|ref|XP_001954422.1| GF16740 [Drosophila ananassae]
gi|190627459|gb|EDV42983.1| GF16740 [Drosophila ananassae]
Length = 415
Score = 60.4 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/245 (17%), Positives = 64/245 (26%), Gaps = 70/245 (28%)
Query: 5 VVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVV------------------ 36
+ K GMT + + G ++ VTVL VV
Sbjct: 46 FIGYKAGMTHIVREADRPGSKVNKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNV 105
Query: 37 --VHRTLD------KNGYMAVQVGAGEAKVKNV----SKPMRGFFSSVNVSPKKKLFEFR 84
H + + KN Y + + +A K K + F + K
Sbjct: 106 WAQHLSEECRRRFYKNWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAH 165
Query: 85 VQKDDDLLPVGSVFSPS---------------------------YFTVGQLVDVTGMTIG 117
Q F +++D G+T G
Sbjct: 166 SQIRLIKQRQKKAHVMEIQLNGGSIEDKVNWARQHLEKPIPVSNVFGQDEMIDCVGVTKG 225
Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
KGF G R + L R G P RV AG+ G + T N
Sbjct: 226 KGFKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVSTTVARAGQKGYHHRTEINK 282
Query: 178 EVVSV 182
++ +
Sbjct: 283 KIYRI 287
>gi|50549253|ref|XP_502097.1| YALI0C21560p [Yarrowia lipolytica]
gi|49647964|emb|CAG82417.1| YALI0C21560p [Yarrowia lipolytica]
Length = 387
Score = 60.4 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/151 (19%), Positives = 46/151 (30%), Gaps = 34/151 (22%)
Query: 89 DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGST 148
+V + F +++D +T GKG+ G R L R
Sbjct: 195 AQQHFEKTVTIDTVFEQDEMIDAIAITKGKGYEGTTHRWGTKKLP--RKTHRGLRKVACI 252
Query: 149 GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-------------------------- 182
G P V +G+ G + T N +V V
Sbjct: 253 G-AWHPANVQYTVARSGQDGYHHRTSANHKVYRVGKGGDESNGSTEFDRTPKTITPMGGF 311
Query: 183 ----DDKRGLILVKGCVPGAKKNSWILVRDS 209
+ +++KG +PG KK I +R S
Sbjct: 312 VRYGEVNNDFLILKGSIPGVKKR-VITLRKS 341
>gi|154426164|gb|AAI51556.1| Ribosomal protein L3 [Bos taurus]
Length = 403
Score = 60.4 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/247 (14%), Positives = 64/247 (25%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVYNI---EGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + G ++ VT++ +V
Sbjct: 44 TAFLGYKAGMTHIVMEVDRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVETPRGLRTFK 103
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ D +G ++ K +
Sbjct: 104 TIFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDADGKKQLERDFSSMKKYCQVIRVI 163
Query: 67 GF---------FSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMT 115
++ + +K D V F +++DV G+T
Sbjct: 164 AHTQMRLLPLRQKKAHLMEVQVNGGTVAEKLDWARERLEQQVPVSQVFGQDEMIDVIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV + AG+ G + T
Sbjct: 224 KGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAFSVARAGQKGYHHRTEI 280
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 281 NKKIYKI 287
>gi|322495094|emb|CBZ30398.1| putative ribosomal protein L3 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495095|emb|CBZ30399.1| putative ribosomal protein L3 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 419
Score = 60.4 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 39/135 (28%), Gaps = 35/135 (25%)
Query: 99 SPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVF 158
S F + DV +T G G G +KR L R G P RV
Sbjct: 210 VDSVFQQSEACDVCSVTKGHGTEGVVKRWGVACLP--RKTHRGLRKVACIG-AWHPARVM 266
Query: 159 KNKKMAGRMGGNRVTVKNLEVVSV--------------------------------DDKR 186
AG+ G + T N ++ + +
Sbjct: 267 YTVARAGQHGYHHRTQLNKKIYQIGRSVAVEPNQATTTYDLTAKTITPMGGFVGYGTVRN 326
Query: 187 GLILVKGCVPGAKKN 201
+++KG V G ++
Sbjct: 327 DYVMLKGSVSGPRRR 341
Score = 35.4 bits (80), Expect = 6.5, Method: Composition-based stats.
Identities = 16/84 (19%), Positives = 25/84 (29%), Gaps = 15/84 (17%)
Query: 5 VVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG 54
+ K GMT + + G ++ PVT+L +V GY VG
Sbjct: 46 FMVFKAGMTHIVRDVDRPGSKVNKKEVVEPVTILEAPPMVIVGIV-----GYRQTPVGLK 100
Query: 55 EAKVKNVSKPMRGFFSSVNVSPKK 78
F + K+
Sbjct: 101 TIGTVWAHHTSVEFRRRYYKNWKQ 124
>gi|296081197|emb|CBI18223.3| unnamed protein product [Vitis vinifera]
Length = 449
Score = 60.4 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/306 (15%), Positives = 79/306 (25%), Gaps = 103/306 (33%)
Query: 3 SGVVARKLGMTCVYNI---EGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + G ++ VT++ +V
Sbjct: 104 TAFLGYKAGMTHIVREVEKPGSKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLN 163
Query: 39 --------------------RTLDK------------NGYMAVQVGAGEAKVKNVSKPMR 66
++ K G ++Q + K +
Sbjct: 164 TVWAQHLSEEVKRRFYKNWCKSKKKAFTKYSKQYETEEGKKSIQAQLEKMKKYASVIRVL 223
Query: 67 GFFS----SVNVSPKKKLFEFRVQKD--------DDLLPVGSVFSPSYFTVGQLVDVTGM 114
K L E +V V + F +++D+ G+
Sbjct: 224 AHTQIRKMKGLKQKKAHLMEIQVNGGTIAQKVDYAYGFFEKQVPVDAIFQKDEMIDIIGV 283
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
T GKG+ G + R L R G P RV AG+ G + T
Sbjct: 284 TKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSFTVARAGQNGYHHRTE 340
Query: 175 KNLEVVSV-------------------------------DDKRGLILVKGCVPGAKKNSW 203
N ++ + K +++KGC G KK
Sbjct: 341 MNKKIYKLGKIEQESHTALTEFDRTEKDITPMGGFPHYGVVKDDYVMIKGCCVGPKKR-V 399
Query: 204 ILVRDS 209
+ +R S
Sbjct: 400 VTLRQS 405
>gi|281351162|gb|EFB26746.1| hypothetical protein PANDA_002530 [Ailuropoda melanoleuca]
Length = 403
Score = 60.4 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/247 (14%), Positives = 65/247 (26%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ VT++ VV
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFK 103
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ D +G ++ K +
Sbjct: 104 TIFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDDDGKKQLEKDFNSMKKYCQVIRVI 163
Query: 67 GF---------FSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMT 115
++ + +K D V F +++DV G+T
Sbjct: 164 AHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV + AG+ G + T
Sbjct: 224 KGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAFSVARAGQKGYHHRTEI 280
Query: 176 NLEVVSV 182
N ++ V
Sbjct: 281 NKKIYKV 287
>gi|296237103|ref|XP_002763611.1| PREDICTED: 60S ribosomal protein L3-like isoform 1 [Callithrix
jacchus]
Length = 403
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/247 (13%), Positives = 65/247 (26%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ VT++ VV
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFK 103
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ D++G ++ K +
Sbjct: 104 TVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVI 163
Query: 67 GF---------FSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMT 115
++ + +K D V F +++DV G++
Sbjct: 164 AHTQMRLLPLRQKKAHLMEIQVNGGTVSEKLDWARKRLEQQVPVNQVFGQDEMIDVIGVS 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
KG+ G R + L R G P RV + AG+ G + T
Sbjct: 224 KRKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAFSVARAGQKGYHHRTEI 280
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 281 NKKIYKI 287
>gi|124802670|ref|XP_001347556.1| 60S ribosomal protein L3, putative [Plasmodium falciparum 3D7]
gi|23495138|gb|AAN35469.1| 60S ribosomal protein L3, putative [Plasmodium falciparum 3D7]
Length = 386
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 44/306 (14%), Positives = 78/306 (25%), Gaps = 96/306 (31%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ T++ VV
Sbjct: 44 TAFMGYKAGMTHIVREVDKPGSKLHKKEIVEACTIIECAPMVVVGIVGYRETPKGLRILS 103
Query: 39 ------------RTLDKNGYMAVQVGA---------------GEAKVKNVSKPMRGFFSS 71
R KN Y + + +
Sbjct: 104 TVWANHVSDEFRRRYYKNWYKSEKKAFTKSLNVPEATKNCLLKRIEKYCTVLRAICHTQP 163
Query: 72 VNVS---PKKKLFEFRVQKDDD--------LLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
K + E ++ + ++ + F +++DV +T G G
Sbjct: 164 SKTPLRMKKAHIMEVQINGGSMKEKLEFVKEMLEKNLPVSTVFNPNEMIDVISVTKGHGT 223
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G + R+ L R G P RV G+ G T +N ++
Sbjct: 224 KGVVSRYGVKRLP--RKTHRGLRKVACIG-AWHPARVQFQIPRHGQKGYFHRTERNKKIY 280
Query: 181 SV-----------DDK-------------------RGLILVKGCVPGAKKNSWILVRDSF 210
+ D +L+KGCV G KK I +R +
Sbjct: 281 RIGLKTDKNSASTDADITEKKITPMGGFPHYGVVNEDFLLLKGCVAGTKKRP-ITLRKNI 339
Query: 211 KSAVNC 216
V+
Sbjct: 340 VPQVSR 345
>gi|327239268|gb|AEA39501.1| ribosomal protein L3 [Ailuropoda melanoleuca]
gi|327239370|gb|AEA39552.1| ribosomal protein L3 [Ailuropoda melanoleuca]
Length = 403
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/247 (14%), Positives = 65/247 (26%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ VT++ VV
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFK 103
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ D +G ++ K +
Sbjct: 104 TIFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDDDGKKQLEKDFNSMKKYCQVIRVI 163
Query: 67 GF---------FSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMT 115
++ + +K D V F +++DV G+T
Sbjct: 164 AHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV + AG+ G + T
Sbjct: 224 KGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAFSVARAGQKGYHHRTEI 280
Query: 176 NLEVVSV 182
N ++ V
Sbjct: 281 NKKIYKV 287
>gi|301757551|ref|XP_002914602.1| PREDICTED: 60S ribosomal protein L3-like [Ailuropoda melanoleuca]
Length = 403
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/247 (14%), Positives = 65/247 (26%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ VT++ VV
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFK 103
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ D +G ++ K +
Sbjct: 104 TIFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDDDGKKQLEKDFNSMKKYCQVIRVI 163
Query: 67 GF---------FSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMT 115
++ + +K D V F +++DV G+T
Sbjct: 164 AHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV + AG+ G + T
Sbjct: 224 KGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAFSVARAGQKGYHHRTEI 280
Query: 176 NLEVVSV 182
N ++ V
Sbjct: 281 NKKIYKV 287
>gi|226329479|ref|ZP_03804997.1| hypothetical protein PROPEN_03388 [Proteus penneri ATCC 35198]
gi|225202665|gb|EEG85019.1| hypothetical protein PROPEN_03388 [Proteus penneri ATCC 35198]
Length = 53
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDN 32
G+V +K+GMT ++ +G IPVTV+ ++
Sbjct: 1 MIGLVGKKVGMTRIFTEDGVSIPVTVIEIEK 31
>gi|73969069|ref|XP_531732.2| PREDICTED: similar to 60S ribosomal protein L3 (L4) isoform 2
[Canis familiaris]
Length = 403
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/247 (14%), Positives = 65/247 (26%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ VT++ VV
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFK 103
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ D +G ++ K +
Sbjct: 104 TIFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDDDGKKQLEKDFNSMKKYCQVIRVI 163
Query: 67 GF---------FSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMT 115
++ + +K D V F +++DV G+T
Sbjct: 164 AHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV + AG+ G + T
Sbjct: 224 KGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAFSVARAGQKGYHHRTEI 280
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 281 NKKIYKI 287
>gi|322494411|emb|CBZ29713.1| putative ribosomal protein L3 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 419
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 39/135 (28%), Gaps = 35/135 (25%)
Query: 99 SPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVF 158
S F + DV +T G G G +KR L R G P RV
Sbjct: 210 VDSVFQQSEACDVCSVTKGHGTEGVVKRWGVACLP--RKTHRGLRKVACIG-AWHPARVM 266
Query: 159 KNKKMAGRMGGNRVTVKNLEVVSV--------------------------------DDKR 186
AG+ G + T N ++ + +
Sbjct: 267 YTVARAGQHGYHHRTQLNKKIYQIGRSVAVEPNQATTTYDLTAKTITPMGGFVGYGTVRN 326
Query: 187 GLILVKGCVPGAKKN 201
+++KG V G ++
Sbjct: 327 DYVMLKGSVSGPRRR 341
>gi|110740330|dbj|BAF02060.1| hypothetical protein [Arabidopsis thaliana]
Length = 555
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 33/210 (15%), Positives = 61/210 (29%), Gaps = 47/210 (22%)
Query: 43 KNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQ------------KDDD 90
++G +Q + K + + K+ ++
Sbjct: 306 EDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAHMMEIQINGGTIAQKVDFAY 365
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
+ + F +++D+ G+T GKG+ G + R L R G
Sbjct: 366 SFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG- 422
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV---------------------------- 182
P RV AG+ G + T N ++ +
Sbjct: 423 AWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMTEYDRTEKDVTPMGGFP 482
Query: 183 ---DDKRGLILVKGCVPGAKKNSWILVRDS 209
K +++KGC G KK + +R S
Sbjct: 483 HYGIVKDDYLMIKGCCVGPKKR-VVTLRQS 511
>gi|149743311|ref|XP_001501957.1| PREDICTED: ribosomal protein L3 [Equus caballus]
Length = 403
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/247 (14%), Positives = 66/247 (26%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ VT++ VV
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFK 103
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ D++G ++ K +
Sbjct: 104 TIFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEDGRKQLEKDFSSMKKYCQVIRVI 163
Query: 67 GF---------FSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMT 115
++ + +K D V F +++DV G+T
Sbjct: 164 AHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV + AG+ G + T
Sbjct: 224 KGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAFSVARAGQKGYHHRTEI 280
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 281 NKKIYKI 287
>gi|116791630|gb|ABK26048.1| unknown [Picea sitchensis]
gi|224285374|gb|ACN40410.1| unknown [Picea sitchensis]
Length = 389
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 41/248 (16%), Positives = 67/248 (27%), Gaps = 71/248 (28%)
Query: 3 SGVVARKLGMTCVYNI---EGRRI-------PVTVLHLDNCQVVVH----RTLD------ 42
+ + K GMT + G ++ VT++ +V +T
Sbjct: 44 TAFLGYKAGMTHIVREVEKPGSKLHKKETCEAVTLIETPPMVIVGVVAYIKTPRGLRTLN 103
Query: 43 ----------------KNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRV- 85
KN Y A + + K S+ + + KK RV
Sbjct: 104 TVWAQHLSEEVRRRFYKNWYRAKKKAFTKYAKKYDSEEGKKDIQTELEKMKKYATVIRVL 163
Query: 86 -------------------------------QKDDDLLPVGSVFSPSYFTVGQLVDVTGM 114
V + F ++VD+ G+
Sbjct: 164 AHTQIKKMKGLKQKKAHLMEIQVNGGTVAQKVDYAYNFFEKQVPIDALFQKDEMVDIIGV 223
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
T GKG+ G + R L R G P RV AG+ G + T
Sbjct: 224 TKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSFTVARAGQNGYHHRTE 280
Query: 175 KNLEVVSV 182
N ++ +
Sbjct: 281 MNKKIYKI 288
>gi|116783991|gb|ABK23172.1| unknown [Picea sitchensis]
Length = 389
Score = 59.6 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/248 (14%), Positives = 63/248 (25%), Gaps = 71/248 (28%)
Query: 3 SGVVARKLGMTCVYNI---EGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + G ++ VT++ +V
Sbjct: 44 TAFLGYKAGMTHIVREVEKPGSKLHKKETCEAVTLIETPPMVIVGVVGYIKTPRGLRTLN 103
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ + G +Q + K +
Sbjct: 104 AVWAQHLSEEVRRRFYKNWYRAKKKAFTKYAKKYDSEEGKKEIQTELEKMKKYATVIRVL 163
Query: 67 GFFS----SVNVSPKKKLFEFRVQKD--------DDLLPVGSVFSPSYFTVGQLVDVTGM 114
K L E +V V + F +++DV G+
Sbjct: 164 AHTQIKKMKGLKQNKAHLMEIQVNGGTVPQKVDYAYNFFEKQVPIDALFQKDEMIDVIGV 223
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
T GKG+ G + R L R G P RV AG+ G + T
Sbjct: 224 TKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSFTVARAGQNGYHHRTE 280
Query: 175 KNLEVVSV 182
N ++ +
Sbjct: 281 MNKKIYKI 288
>gi|326509435|dbj|BAJ91634.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 388
Score = 59.6 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/135 (23%), Positives = 44/135 (32%), Gaps = 33/135 (24%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
S F Q++DV G+T G G G R L R G P V +
Sbjct: 208 SIFEQNQVIDVIGVTSGHGTEGVTHRWGVTRLP--RKTHRGLRKVACIG-AWHPSNVMYS 264
Query: 161 KKMAGRMGGNRVTVKNLEVVSV----DDK--------------------------RGLIL 190
AG+ G + T KN ++ + D K ++
Sbjct: 265 VPRAGQNGYHHRTEKNKKIYRIGTGSDVKSGSTEYDISDKTITPMGGFPHYGIVNEDFVM 324
Query: 191 VKGCVPGAKKNSWIL 205
VKG VPG K +L
Sbjct: 325 VKGGVPGTLKRPLVL 339
>gi|146097013|ref|XP_001468007.1| ribosomal protein l3 [Leishmania infantum JPCM5]
gi|146099403|ref|XP_001468635.1| ribosomal protein l3 [Leishmania infantum]
gi|134072373|emb|CAM71081.1| putative ribosomal protein L3 [Leishmania infantum JPCM5]
gi|134073003|emb|CAM71722.1| putative ribosomal protein L3 [Leishmania infantum JPCM5]
Length = 419
Score = 59.6 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 39/135 (28%), Gaps = 35/135 (25%)
Query: 99 SPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVF 158
S F + DV +T G G G +KR L R G P RV
Sbjct: 210 VDSVFQQSEACDVCSVTKGHGTEGVVKRWGVACLP--RKTHRGLRKVACIG-AWHPARVM 266
Query: 159 KNKKMAGRMGGNRVTVKNLEVVSV--------------------------------DDKR 186
AG+ G + T N ++ + +
Sbjct: 267 YTVARAGQHGYHHRTQLNKKIYQIGRSVAVEPNQATTTYDLTAKTITPMGGFVGYGTVRN 326
Query: 187 GLILVKGCVPGAKKN 201
+++KG V G ++
Sbjct: 327 DYVMLKGSVSGPRRR 341
>gi|164424622|ref|XP_963317.2| 60S ribosomal protein L3 [Neurospora crassa OR74A]
gi|30580497|sp|P59671|RL3_NEUCR RecName: Full=60S ribosomal protein L3
gi|28881190|emb|CAD70371.1| probable 60s ribosomal protein l3 (rpl3) [Neurospora crassa]
gi|157070591|gb|EAA34081.2| 60S ribosomal protein L3 [Neurospora crassa OR74A]
Length = 392
Score = 59.6 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 31/139 (22%), Positives = 46/139 (33%), Gaps = 34/139 (24%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
S F +++DV +T G GF+G R L R G P V
Sbjct: 208 SIFEKDEVIDVIAVTKGHGFTGVTARWGTKKLP--RKTHKGLRKVACIG-AWHPSHVQWT 264
Query: 161 KKMAGRMGGNRVTVKNLEVVSV---DDK---------------------------RGLIL 190
AG+ G + T N ++ + D + ++
Sbjct: 265 VARAGQAGYHHRTSVNHKIYRIGKGDAEDSAATEVDVTKKKITPMGGFVRYGEINNDFVM 324
Query: 191 VKGCVPGAKKNSWILVRDS 209
VKG VPG KK + +R S
Sbjct: 325 VKGSVPGVKKR-VMTLRKS 342
>gi|57094678|ref|XP_532246.1| PREDICTED: similar to 60S ribosomal protein L3 (L4) isoform 1
[Canis familiaris]
Length = 403
Score = 59.6 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/247 (14%), Positives = 65/247 (26%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ VT++ VV
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFK 103
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ D +G ++ K +
Sbjct: 104 TIFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDDDGKKQLEKDFNSMKKYCQVIRVI 163
Query: 67 GF---------FSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMT 115
++ + +K D V F +++DV G+T
Sbjct: 164 AHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV + AG+ G + T
Sbjct: 224 KGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAFSMARAGQKGYHHRTEI 280
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 281 NKKIYKI 287
>gi|194693910|gb|ACF81039.1| unknown [Zea mays]
gi|194702010|gb|ACF85089.1| unknown [Zea mays]
gi|195606812|gb|ACG25236.1| 60S ribosomal protein L3 [Zea mays]
gi|195619674|gb|ACG31667.1| 60S ribosomal protein L3 [Zea mays]
gi|195626206|gb|ACG34933.1| 60S ribosomal protein L3 [Zea mays]
gi|195641988|gb|ACG40462.1| 60S ribosomal protein L3 [Zea mays]
Length = 389
Score = 59.6 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 46/306 (15%), Positives = 78/306 (25%), Gaps = 103/306 (33%)
Query: 3 SGVVARKLGMTCVYNI---EGRRI-------PVTVLHLDNCQVV---------------- 36
+ + K GMT + G ++ VT++ +V
Sbjct: 44 TAFLGYKAGMTHIVREVEKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLN 103
Query: 37 ------------------------------VHRTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ + G +Q+ + K +
Sbjct: 104 SVWAQHLSEEVRRRFYKNWCKSKKKAFTKYALKYENDAGKKEIQLQLEKMKKYASVIRVI 163
Query: 67 GFFS----SVNVSPKKKLFEFRVQKD--------DDLLPVGSVFSPSYFTVGQLVDVTGM 114
K L E +V V + F +++D+ G+
Sbjct: 164 AHTQIRKMKGLKQKKAHLMEIQVNGGTIADKVDYGYKFFEKEVPVDAVFQKDEMIDIIGV 223
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
T GKG+ G + R L R G P RV AG+ G + T
Sbjct: 224 TKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSYTVARAGQNGYHHRTE 280
Query: 175 KNLEVVSV-------------------------------DDKRGLILVKGCVPGAKKNSW 203
N +V + K +++KGC G KK
Sbjct: 281 MNKKVYKIGKAGQETHDASTEFDRTEKDITPMGGFPHYGIVKGDYLMIKGCCVGPKKR-V 339
Query: 204 ILVRDS 209
+ +R S
Sbjct: 340 VTLRQS 345
>gi|7159574|emb|CAB76199.1| ribosomal protein L3 [Bos taurus]
Length = 403
Score = 59.6 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/247 (14%), Positives = 65/247 (26%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ VT++ +V
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVETPRGLRTFK 103
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ D +G ++ K +
Sbjct: 104 TIFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDADGKKQLERDFSSMKKYCQVIRVI 163
Query: 67 GF---------FSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMT 115
++ + +K D V F +++DV G+T
Sbjct: 164 AHTQMRLLPLRQKKAHLMEVQVNGGTVAEKLDWARERLEQQVPVSQVFGQDEMIDVIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV + AG+ G + T
Sbjct: 224 KGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAFSVARAGQKGYHHRTEI 280
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 281 NKKIYKI 287
>gi|212721340|ref|NP_001131208.1| hypothetical protein LOC100192516 [Zea mays]
gi|194690876|gb|ACF79522.1| unknown [Zea mays]
Length = 389
Score = 59.6 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 46/306 (15%), Positives = 78/306 (25%), Gaps = 103/306 (33%)
Query: 3 SGVVARKLGMTCVYNI---EGRRI-------PVTVLHLDNCQVV---------------- 36
+ + K GMT + G ++ VT++ +V
Sbjct: 44 TAFLGYKAGMTHIVREVEKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLN 103
Query: 37 ------------------------------VHRTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ + G +Q+ + K +
Sbjct: 104 SVWAQHLSEEVRRRFYKNWCKSKKKAFTKYALKYENDAGKKEIQLQLEKMKKYASVIRVI 163
Query: 67 GFFS----SVNVSPKKKLFEFRVQKD--------DDLLPVGSVFSPSYFTVGQLVDVTGM 114
K L E +V V + F +++D+ G+
Sbjct: 164 AHTQIRKMKGLKQKKAHLMEIQVNGGTIADKVDYGYKFFEKEVPVDAVFQKDEMIDIIGV 223
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
T GKG+ G + R L R G P RV AG+ G + T
Sbjct: 224 TKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSYTVARAGQNGYHHRTE 280
Query: 175 KNLEVVSV-------------------------------DDKRGLILVKGCVPGAKKNSW 203
N +V + K +++KGC G KK
Sbjct: 281 MNKKVYKIGKAGQETHDASTEFDRTEKDITPMGGFPHYGIVKGDYLMIKGCCVGPKKR-V 339
Query: 204 ILVRDS 209
+ +R S
Sbjct: 340 VTLRQS 345
>gi|115725235|ref|XP_791350.2| PREDICTED: similar to Ribosomal protein L3 [Strongylocentrotus
purpuratus]
gi|115968341|ref|XP_001177867.1| PREDICTED: similar to Ribosomal protein L3 [Strongylocentrotus
purpuratus]
Length = 404
Score = 59.6 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 50/309 (16%), Positives = 79/309 (25%), Gaps = 108/309 (34%)
Query: 5 VVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVV----------------- 37
+ K GMT + + G ++ V++L +V
Sbjct: 46 FLGYKAGMTHIVRDVDRPGSKVNKKEVVEAVSILETPPMIIVGLVGYIETPSGLRALKTV 105
Query: 38 ---------HRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKD 88
R KN Y + + ++ K + + KK RV
Sbjct: 106 WAEHLSDECKRRFYKNWYRSKKKAFTKSSKKWADEMGKKEIEKDLNIMKKYCTVIRVIAH 165
Query: 89 DDLLPVGSVF-------------------------------SPSYFTVGQLVDVTGMTIG 117
+ + F +L+D+ G+T G
Sbjct: 166 TQMKLMNQRQKKAHVMEIQLNGGSIGDKIEWARERLEKNIPVSEVFGQDELIDIIGVTKG 225
Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
GF G R L R G P RV AG+ G + T N
Sbjct: 226 HGFKGVTSRWGTKKLP--RKTHKGLRKVACIG-AWHPARVGYGVARAGQKGYHHRTEINK 282
Query: 178 EVVSV-------------------------------------DDKRGLILVKGCVPGAKK 200
+V V + K +++KGCV G KK
Sbjct: 283 KVYRVGKGYHLDGAKLVKNNGGTIQDITDKSINPMGGFPHYGEVKNDFLMIKGCVVGPKK 342
Query: 201 NSWILVRDS 209
+ +R S
Sbjct: 343 R-VLTLRKS 350
>gi|224120106|ref|XP_002331138.1| predicted protein [Populus trichocarpa]
gi|222872866|gb|EEF09997.1| predicted protein [Populus trichocarpa]
Length = 389
Score = 59.2 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/215 (17%), Positives = 63/215 (29%), Gaps = 47/215 (21%)
Query: 38 HRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFS----SVNVSPKKKLFEFRVQKDD---- 89
+ ++G +Q + K + K L E +V D
Sbjct: 135 KKYESEDGKKDIQAQLEKLKKYCTVIRVLVHTQIRKMKGLKQKKAHLMEIQVNGGDVAKK 194
Query: 90 ----DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSH 145
+ + F +++D+ G+T GKG+ G + R L R
Sbjct: 195 VDFAYSFFEKQIPIDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKV 252
Query: 146 GSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV----------------------- 182
G P RV AG+ G + T N ++ +
Sbjct: 253 ACIG-AWHPARVSFTVARAGQNGYHHRTELNKKIYKLGKCGQESHCAVTEYDRTEKDITP 311
Query: 183 --------DDKRGLILVKGCVPGAKKNSWILVRDS 209
K +++KGC G KK + +R S
Sbjct: 312 IGGFPHYGVVKEDYLMIKGCCVGPKKR-VVTLRQS 345
>gi|156081997|ref|XP_001608491.1| ribosomal protein L3 [Plasmodium vivax SaI-1]
gi|148801062|gb|EDL42467.1| ribosomal protein L3, putative [Plasmodium vivax]
Length = 386
Score = 59.2 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 46/306 (15%), Positives = 79/306 (25%), Gaps = 96/306 (31%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVV--------------- 37
+ + K GMT + + G ++ T++ VV
Sbjct: 44 TAFMGYKAGMTHIVREVDKPGSKLHKKEIVEACTIIECAPMVVVGMVGYRETPKGLRILT 103
Query: 38 -----------HRTLDKNGYMAVQVG---------------AGEAKVKNVSKPMRGF--- 68
R KN Y + + +
Sbjct: 104 TVWANHVSDEFRRRYYKNWYKSDKKAFTKALMVPKLTKESLYKRIEKYCTVLRAVCHTQP 163
Query: 69 ------FSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++ + K D L ++ + F +++DV +T G G
Sbjct: 164 SKTPLSMKKAHIMEIQINGGGMKDKIDFLKELLEKNLPVSNVFNTNEMIDVISVTKGHGT 223
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G + R+ L R G P RV G+ G T +N ++
Sbjct: 224 KGVVSRYGVKRLP--RKTHRGLRKVACIG-AWHPARVQFQVPRHGQKGYFHRTERNKKIY 280
Query: 181 SVDDKR------------------------------GLILVKGCVPGAKKNSWILVRDSF 210
+ K+ IL+KGCV G KK I +R +
Sbjct: 281 RIGLKKDKNNASTDADITEKKITPMGGFPHYGVVNEDFILLKGCVAGTKKRP-ITLRKTL 339
Query: 211 KSAVNC 216
V+
Sbjct: 340 VPQVSR 345
>gi|62083393|gb|AAX62421.1| ribosomal protein L3 [Lysiphlebus testaceipes]
gi|62083395|gb|AAX62422.1| ribosomal protein L3 variant 1 [Lysiphlebus testaceipes]
Length = 412
Score = 59.2 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 42/247 (17%), Positives = 65/247 (26%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVV--------------- 37
+ + K GMT V + G ++ VT+L +V
Sbjct: 44 TAFIGYKAGMTHVVREADRPGSKVNKKEIVEAVTILETPPMMIVGCVGYIETPHGLRALT 103
Query: 38 -----------HRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRV- 85
R KN Y + + +A K R KK RV
Sbjct: 104 TVWAEHLSEDCRRRFYKNWYKSKKKAFTKASKKWQDDLGRKSIEKDLKKIKKYCKVVRVI 163
Query: 86 ------------------------------QKDDDLLPVGSVFSPSYFTVGQLVDVTGMT 115
+ + + F +++DV G+T
Sbjct: 164 AHTQMKLLRQRQKKANIMEIQLNGGSIADKVEWAREHLEKPIPVSNVFAQDEMIDVIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG G R + L R G P RV AG+ G + T
Sbjct: 224 KGKGTKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVSFTVARAGQKGYHHRTEM 280
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 281 NKKIYRI 287
>gi|294867277|ref|XP_002765039.1| 60S ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
gi|239864919|gb|EEQ97756.1| 60S ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
Length = 385
Score = 59.2 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 50/298 (16%), Positives = 75/298 (25%), Gaps = 95/298 (31%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVV--------------- 37
+ + K GMT + + G ++ VTVL V
Sbjct: 44 TAFMGYKAGMTHIVRDVDKPGSKLHRKEVVEAVTVLEAPPMVCVGFVGYVETPNGLRALT 103
Query: 38 -----------HRTLDKNGYMAVQVGAGE------------AKVKNVSKPMRGFF---SS 71
R KN Y + + + K
Sbjct: 104 TVWAKHLSDEVRRRFYKNWYHSKKKAFSKYQEKDHDAEVQRCKKYCQVVRAIMHTQVSKV 163
Query: 72 VNVSPKKKLFEFRVQKDD--------DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
K + E +V L V S F ++VD+ G+T G G +
Sbjct: 164 KLTQKKAHIVEVQVNGGSVSDKVDFCQSLFEKEVPISSVFDKDEMVDIIGVTKGHGNTSV 223
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV- 182
R L R G P RV AG+MG + N ++ +
Sbjct: 224 TTRWGVTRLA--RKTHRGLRKVACIG-AWHPARVQFQVPRAGQMGYHHRVEINKKIYRIG 280
Query: 183 -----DDKR--------------------------GLILVKGCVPGAKKNSWILVRDS 209
D +++KG V G KK I +R S
Sbjct: 281 KALREDPNNAAGSNDLTQKAITPMGGFPHYGEVNEDWVMLKGTVTGPKKR-VITLRKS 337
>gi|27807287|ref|NP_777140.1| 60S ribosomal protein L3 [Bos taurus]
gi|730564|sp|P39872|RL3_BOVIN RecName: Full=60S ribosomal protein L3
gi|187609300|pdb|2ZKR|BB Chain b, Structure Of A Mammalian Ribosomal 60s Subunit Within An
80s Complex Obtained By Docking Homology Models Of The
Rna And Proteins Into An 8.7 A Cryo-Em Map
gi|450499|emb|CAA82654.1| ribosomal protein L3 [Bos taurus]
gi|59858389|gb|AAX09029.1| ribosomal protein L3 [Bos taurus]
gi|74267942|gb|AAI02254.1| Ribosomal protein L3 [Bos taurus]
gi|296486985|gb|DAA29098.1| 60S ribosomal protein L3 [Bos taurus]
gi|1092507|prf||2024221A ribosomal protein L3
Length = 403
Score = 59.2 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/247 (14%), Positives = 65/247 (26%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ VT++ +V
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVETPRGLRTFK 103
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ D +G ++ K +
Sbjct: 104 TIFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDADGKKQLERDFSSMKKYCQVIRVI 163
Query: 67 GF---------FSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMT 115
++ + +K D V F +++DV G+T
Sbjct: 164 AHTQMRLLPLRQKKAHLMEVQVNGGTVAEKLDWARERLEQQVPVSQVFGQDEMIDVIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV + AG+ G + T
Sbjct: 224 KGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAFSVARAGQKGYHHRTEI 280
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 281 NKKIYKI 287
>gi|294954638|ref|XP_002788244.1| 60S ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
gi|239903507|gb|EER20040.1| 60S ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
Length = 385
Score = 59.2 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 50/298 (16%), Positives = 75/298 (25%), Gaps = 95/298 (31%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVV--------------- 37
+ + K GMT + + G ++ VTVL V
Sbjct: 44 TAFMGYKAGMTHIVRDVDKPGSKLHRKEVVEAVTVLEAPPMVCVGFVGYVETPNGLRALT 103
Query: 38 -----------HRTLDKNGYMAVQVGAGE------------AKVKNVSKPMRGFF---SS 71
R KN Y + + + K
Sbjct: 104 TVWAKHLSDEVRRRFYKNWYHSKKKAFSKYQEKDHDAEVQRCKKYCQVVRAIMHTQVSKV 163
Query: 72 VNVSPKKKLFEFRVQKDD--------DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
K + E +V L V S F ++VD+ G+T G G +
Sbjct: 164 KLTQKKAHIVEVQVNGGSVSDKVDFCQSLFEKEVPISSVFDKDEMVDIIGVTKGHGNTSV 223
Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV- 182
R L R G P RV AG+MG + N ++ +
Sbjct: 224 TTRWGVTRLA--RKTHRGLRKVACIG-AWHPARVQFQVPRAGQMGYHHRVEINKKIYRIG 280
Query: 183 -----DDKR--------------------------GLILVKGCVPGAKKNSWILVRDS 209
D +++KG V G KK I +R S
Sbjct: 281 KALREDPNNAAGSNDLTQKAITPMGGFPHYGEVNEDWVMLKGTVTGPKKR-VITLRKS 337
>gi|18253047|gb|AAL62468.1| ribosomal protein L3 [Spodoptera frugiperda]
Length = 413
Score = 59.2 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 50/318 (15%), Positives = 80/318 (25%), Gaps = 108/318 (33%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT V + G +I VT++ V
Sbjct: 44 TAFIGYKAGMTHVVREPDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALL 103
Query: 39 ------------RTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS--------------- 71
R KN Y + +A K + R
Sbjct: 104 TVWAEHMSEDCRRRFYKNWYKCKKKAFTKASKKWQDELGRKSIEKDFKKMIRYCSVVRVI 163
Query: 72 --------VNVSPKKKLFEFRVQKD--------DDLLPVGSVFSPSYFTVGQLVDVTGMT 115
K + E +V + S F +++D G+T
Sbjct: 164 AHTQMKLLKQRQKKAHIMEIQVNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV AG+ G + T
Sbjct: 224 KGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVSFTVARAGQKGYHHRTEM 280
Query: 176 NLEVVSV-------------------------------------DDKRGLILVKGCVPGA 198
N ++ + + +++KGC G
Sbjct: 281 NKKIYRIGQGIHTKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGP 340
Query: 199 KKNSWILVRDSFKSAVNC 216
KK I +R S ++
Sbjct: 341 KKR-VITLRKSLRTHTKR 357
>gi|268306352|gb|ACY95297.1| ribosomal protein L3 [Manduca sexta]
Length = 414
Score = 59.2 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 50/313 (15%), Positives = 79/313 (25%), Gaps = 108/313 (34%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT V + G +I VT++ V
Sbjct: 44 TAFIGYKAGMTHVVREPDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALL 103
Query: 39 ------------RTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS--------------- 71
R KN Y + +A K + R
Sbjct: 104 TVWAEHMSEDCRRRFYKNWYKCKKKAFTKASKKWQDELGRKSIEKDFKKMIRYCSVVRII 163
Query: 72 --------VNVSPKKKLFEFRVQKD--------DDLLPVGSVFSPSYFTVGQLVDVTGMT 115
K + E +V + S F +++D G+T
Sbjct: 164 AHTQMKLLKQRQKKAHIMEIQVNGGTIEDKVKWAREHLEKPIPIDSVFAQDEMIDCIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV AG+ G + T
Sbjct: 224 KGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVSFTVARAGQKGYHHRTEM 280
Query: 176 NLEVVSV-------------------------------------DDKRGLILVKGCVPGA 198
N ++ + + +++KGC G
Sbjct: 281 NKKIYRIGQGIHTKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGP 340
Query: 199 KKNSWILVRDSFK 211
KK I +R S +
Sbjct: 341 KKR-VITLRKSLR 352
>gi|312385734|gb|EFR30160.1| hypothetical protein AND_00422 [Anopheles darlingi]
Length = 405
Score = 59.2 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 41/247 (16%), Positives = 65/247 (26%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVV---------------- 36
+ +A K GMT + + G +I VT+L VV
Sbjct: 31 TAFLAYKAGMTHIVREADRPGSKINKKEVLEAVTILETPPIVVVGAVGYIETPFGPRALC 90
Query: 37 ----VHRTLD------KNGYMAVQVGAGEAKVKNVSK----PMRGFFSSVNVSPKKKLFE 82
H + + KN + A + +A K + F + K
Sbjct: 91 NVWAQHLSEECRRRFYKNWHSAKKKAFTKASKKWTDDLGKKSIEDTFKKMIRYCKFIRVI 150
Query: 83 FRVQKDDDLLPVGSVFSPS---------------------------YFTVGQLVDVTGMT 115
Q F+ +++D +T
Sbjct: 151 AHSQIRMVKQGQKKAHIIEIQLNGGSVEDKVNWVKEHLEKPIPVSQVFSQDEMIDCVAVT 210
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKGF G R + L R G P RV AG+ G + T
Sbjct: 211 KGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVAFTVARAGQKGYHHRTEL 267
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 268 NKKIYRI 274
>gi|307169360|gb|EFN62081.1| 60S ribosomal protein L3 [Camponotus floridanus]
Length = 402
Score = 59.2 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 42/247 (17%), Positives = 67/247 (27%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVV--------------- 37
+ + K GMT V + G ++ VT+L VV
Sbjct: 31 TAFIGYKAGMTHVVREADRPGSKVNKKEIVEAVTILETPPMIVVGLVGYIETPHGLRALA 90
Query: 38 -----------HRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQ 86
R KN Y + + +A K R + KK R+
Sbjct: 91 TVWAEHLSEDCRRRFYKNWYKSKKKAFTKASKKWQDDLGRKSIEADLKKIKKYCSVVRII 150
Query: 87 KDDDLLPVGSVFSPSYFTVGQ-------------------------------LVDVTGMT 115
+ + ++ Q ++DV G+T
Sbjct: 151 AHTQMKLLRQRQKKAHIMEIQLNGGTIEDKVQWAREHLEKPVPVSNVFASDEMIDVIGVT 210
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV AG+ G + T
Sbjct: 211 KGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVSFTVARAGQKGYHHRTEM 267
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 268 NKKIYRI 274
>gi|221054097|ref|XP_002261796.1| ribosomal protein L3 [Plasmodium knowlesi strain H]
gi|193808256|emb|CAQ38959.1| ribosomal protein L3, putative [Plasmodium knowlesi strain H]
Length = 386
Score = 59.2 bits (142), Expect = 4e-07, Method: Composition-based stats.
Identities = 46/306 (15%), Positives = 79/306 (25%), Gaps = 96/306 (31%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVV--------------- 37
+ + K GMT + + G ++ T++ VV
Sbjct: 44 TAFMGYKAGMTHIVREVDKPGSKLHKKEIVEACTIVECAPMVVVGMVGYRETPKGLRILT 103
Query: 38 -----------HRTLDKNGYMAVQVG---------------AGEAKVKNVSKPMRGF--- 68
R KN Y + + +
Sbjct: 104 TVWANHVSDEFRRRYYKNWYKSDKKAFTKALMVPKLTKESLYKRIEKYCTVLRAVCHTQP 163
Query: 69 ------FSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++ + K D L ++ + F +++DV +T G G
Sbjct: 164 SKTPLSMKKAHIMEIQINGGGMKDKIDFLKELMEKNLPVSNVFNTNEMIDVISVTKGHGT 223
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G + R+ L R G P RV G+ G T +N ++
Sbjct: 224 KGVVSRYGVKRLP--RKTHRGLRKVACIG-AWHPARVQFQVPRHGQKGYFHRTERNKKIY 280
Query: 181 SVDDKR------------------------------GLILVKGCVPGAKKNSWILVRDSF 210
+ K+ IL+KGCV G KK I +R +
Sbjct: 281 RIGLKKDKNNASTDADITEKKITPMGGFPHYGVVNEDFILLKGCVAGTKKRP-ITLRKTL 339
Query: 211 KSAVNC 216
V+
Sbjct: 340 VPQVSR 345
>gi|325184995|emb|CCA19486.1| 60S ribosomal protein L3 putative [Albugo laibachii Nc14]
Length = 388
Score = 58.9 bits (141), Expect = 4e-07, Method: Composition-based stats.
Identities = 49/301 (16%), Positives = 78/301 (25%), Gaps = 98/301 (32%)
Query: 3 SGVVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVH-------------- 38
+ +A K GMT + + V++L +V
Sbjct: 44 TAFLAHKAGMTHIMREVNQPGSKLHKKEIVEAVSILETPPMVIVGVVGYLETPRGLRSLT 103
Query: 39 ------------RTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS------------VNV 74
R KN Y + + + K + + +
Sbjct: 104 TVWAEHLSEEVKRRFYKNWYKSKRKAFTKYAKKYANSSDIERELNRIKKYCQVVRVLAHD 163
Query: 75 SPKKKLFEF----------------RVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
PKK L V + FT +L+D+ G T G
Sbjct: 164 QPKKLHLRIKKAHIMEIQINGGSVPDKVDFAKSLFEKQVPVSAVFTQDELIDICGATKGH 223
Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
G G + R L R G P RV AG+ G + T N +
Sbjct: 224 GIEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPSRVSYTVPRAGQHGYHHRTEINKK 280
Query: 179 VVSV---------DDKRGL---------------------ILVKGCVPGAKKNSWILVRD 208
+ + ++ L +++KG V G KK I +R
Sbjct: 281 IYRIGAAGDAKSCQTEQDLTEKSITPMGGFPHYGIINEDWLMIKGAVVGVKKRP-ITLRK 339
Query: 209 S 209
S
Sbjct: 340 S 340
>gi|225460636|ref|XP_002265125.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 397
Score = 58.9 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 46/306 (15%), Positives = 79/306 (25%), Gaps = 103/306 (33%)
Query: 3 SGVVARKLGMTCVYNI---EGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + G ++ VT++ +V
Sbjct: 52 TAFLGYKAGMTHIVREVEKPGSKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLN 111
Query: 39 --------------------RTLDK------------NGYMAVQVGAGEAKVKNVSKPMR 66
++ K G ++Q + K +
Sbjct: 112 TVWAQHLSEEVKRRFYKNWCKSKKKAFTKYSKQYETEEGKKSIQAQLEKMKKYASVIRVL 171
Query: 67 GFFS----SVNVSPKKKLFEFRVQKD--------DDLLPVGSVFSPSYFTVGQLVDVTGM 114
K L E +V V + F +++D+ G+
Sbjct: 172 AHTQIRKMKGLKQKKAHLMEIQVNGGTIAQKVDYAYGFFEKQVPVDAIFQKDEMIDIIGV 231
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
T GKG+ G + R L R G P RV AG+ G + T
Sbjct: 232 TKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSFTVARAGQNGYHHRTE 288
Query: 175 KNLEVVSV-------------------------------DDKRGLILVKGCVPGAKKNSW 203
N ++ + K +++KGC G KK
Sbjct: 289 MNKKIYKLGKIEQESHTALTEFDRTEKDITPMGGFPHYGVVKDDYVMIKGCCVGPKKR-V 347
Query: 204 ILVRDS 209
+ +R S
Sbjct: 348 VTLRQS 353
>gi|1350745|sp|P49149|RL3_TOXCA RecName: Full=60S ribosomal protein L3
gi|596082|gb|AAA92285.1| ribosomal protein L3 [Toxocara canis]
Length = 402
Score = 58.9 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 66/246 (26%), Gaps = 70/246 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ +A K GMT + + G ++ VT+ +V
Sbjct: 44 TAFIAFKAGMTHIVREVDKPGSKVNKKEVVEAVTIFEAPPMVIVGIVGYIDTPRGPRQFK 103
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ D++G +++ + K +
Sbjct: 104 TVWAEHLSEDCRGRFYKNWHTSKKKAFQKHAKKWQDEDGRKSIEADLNKMKKYCSKIRVI 163
Query: 67 GFFSSV---NVSPKKKLFEFRVQKD--------DDLLPVGSVFSPSYFTVGQLVDVTGMT 115
+ K + E ++ V S F +++D G+T
Sbjct: 164 AHTQMKVMKHREKKAHIMEIQINGGTVAEKVDWAREHLEKQVPVDSVFAQDEMIDCIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKGF G R + L R G P RV AG+ G + T
Sbjct: 224 KGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVQFTVARAGQKGYHHRTEV 280
Query: 176 NLEVVS 181
N ++
Sbjct: 281 NKKIYR 286
>gi|15220533|ref|NP_176352.1| RPL3B (R-PROTEIN L3 B); structural constituent of ribosome
[Arabidopsis thaliana]
gi|21542436|sp|P22738|RL32_ARATH RecName: Full=60S ribosomal protein L3-2
gi|4585874|gb|AAD25547.1|AC005850_4 60s ribosomal protein L3 [Arabidopsis thaliana]
gi|28392966|gb|AAO41918.1| putative ribosomal protein [Arabidopsis thaliana]
gi|28973595|gb|AAO64122.1| putative ribosomal protein [Arabidopsis thaliana]
gi|332195738|gb|AEE33859.1| 60S ribosomal protein L3-2 [Arabidopsis thaliana]
Length = 390
Score = 58.9 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/152 (21%), Positives = 49/152 (32%), Gaps = 35/152 (23%)
Query: 89 DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGST 148
L V + F +++D+ G+T GKG+ G + R L R
Sbjct: 198 ACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACI 255
Query: 149 GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-------------------------- 182
G P RV AG+ G + T N +V V
Sbjct: 256 G-AWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMTEYDRTEKDITPMGG 314
Query: 183 -----DDKRGLILVKGCVPGAKKNSWILVRDS 209
K +++KGC G KK + +R +
Sbjct: 315 FPHYGIVKEDYLMIKGCCVGPKKR-VVTLRQT 345
>gi|301791988|ref|XP_002930962.1| PREDICTED: LOW QUALITY PROTEIN: 60S ribosomal protein L3-like,
partial [Ailuropoda melanoleuca]
Length = 355
Score = 58.9 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 33/198 (16%), Positives = 57/198 (28%), Gaps = 28/198 (14%)
Query: 3 SGVVARKLGMTCVYNI---EGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
+ + K GMT + G ++ VT++ + V GY G
Sbjct: 48 TAFLGYKAGMTHIVXEVSRPGSKVKKKEIVEDVTIVEAPSMVV------GTMGYEETIQG 101
Query: 53 AGEAKVKNVSKPMRG---FFSSVNVSPKKKLFEFR----VQKDDDLLPVGSVFSPSYFTV 105
K F KK ++ L +
Sbjct: 102 LCTLKTIFAEHIHDKCKRHFYKNWGKSKKAFNKYCKWQDNDGKQQLEKDFNSMRYGQIIH 161
Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGL-RATHGVSISHRSHGSTGCRQDPGRVFKNKKMA 164
+++ V +T GKG+ + L TH G G P +V + A
Sbjct: 162 DEMIHVISVTKGKGYKEVTSHWHTKKLPCKTHQGLC---KVGCIG-AWHPAQVAFSMAWA 217
Query: 165 GRMGGNRVTVKNLEVVSV 182
G+ G + T N ++ +
Sbjct: 218 GQKGYHHCTEINKKIYKI 235
>gi|6688812|emb|CAB65281.1| L3 Ribosomal protein [Medicago sativa subsp. x varia]
Length = 388
Score = 58.9 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 46/306 (15%), Positives = 77/306 (25%), Gaps = 103/306 (33%)
Query: 3 SGVVARKLGMTCVYNI---EGRRI-------PVTVLHLDN-------------------C 33
+ + K GMT + G ++ PVT++
Sbjct: 44 TAFLGYKAGMTHIVREVEKPGSKLHKKETCEPVTIIETPPMVVVGVVGYVKTPRGLRTLN 103
Query: 34 QV-VVHRTLD--------------------------KNGYMAVQVGAGEAKVKNVSKPMR 66
V H + + G +Q + K +
Sbjct: 104 TVWTQHLSEEIKRRFYKNWCKSKKKAFSKYSKQYESDEGKKNIQTQLEKLKKYATVIRVL 163
Query: 67 GFFS----SVNVSPKKKLFEFRVQKD--------DDLLPVGSVFSPSYFTVGQLVDVTGM 114
K + E +V V + F +++D+ G+
Sbjct: 164 AHTQIRKMKGLKQKKAHIMEIQVNGGTIAQKVDFAYNFFEKQVPIDAVFQKDEMIDIIGV 223
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
T GKG+ G + R L R G P RV AG+ G + T
Sbjct: 224 TKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSFTVARAGQNGYHHRTE 280
Query: 175 KNLEVVSV-------------------------------DDKRGLILVKGCVPGAKKNSW 203
N ++ + K +++KG G KK
Sbjct: 281 LNKKIYKLGKVGEETHDAQTEFDRTEKDITPMGGFPHYGIVKEDFLMIKGGCVGPKKR-V 339
Query: 204 ILVRDS 209
I +R S
Sbjct: 340 ITLRQS 345
>gi|255642195|gb|ACU21362.1| unknown [Glycine max]
Length = 389
Score = 58.9 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 50/313 (15%), Positives = 82/313 (26%), Gaps = 103/313 (32%)
Query: 3 SGVVARKLGMTCVYNI---EGRRI-------PVTVLHLDNCQVVV----HRTLD------ 42
+ + K GMT + G ++ PVT++ +V +T
Sbjct: 44 TAFLGYKAGMTHIVREVEKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLN 103
Query: 43 ----------------KNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRV- 85
KN + + + + ++ + + KK RV
Sbjct: 104 TVWAQHLSEELKRRFYKNWCKSKKKAFTKYSKQYETEEGKKNIEAQLEKLKKYATVVRVL 163
Query: 86 -------------------------------QKDDDLLPVGSVFSPSYFTVGQLVDVTGM 114
V + F +++D+ G+
Sbjct: 164 AHTQIRKMKGLKQKKAHIMEIQVNGGTIAQKVDFAYSFLEKQVPIDAVFQKDEMIDIIGV 223
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
T GKG+ G + R L R G P RV AG+ G + T
Sbjct: 224 TKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSFTVARAGQNGYHHRTE 280
Query: 175 KNLEVVSV-------------------------------DDKRGLILVKGCVPGAKKNSW 203
N +V + K I+VKGC G KK
Sbjct: 281 LNKKVYKLGKAGDESHSALTEFDRTEKDITPIGGFPHYGVVKDDYIMVKGCCVGLKKR-V 339
Query: 204 ILVRDSFKSAVNC 216
I +R S +
Sbjct: 340 ITLRQSLLKQTSR 352
>gi|147833564|emb|CAN63848.1| hypothetical protein VITISV_039858 [Vitis vinifera]
Length = 389
Score = 58.9 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 46/313 (14%), Positives = 80/313 (25%), Gaps = 103/313 (32%)
Query: 3 SGVVARKLGMTCVYNI---EGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + G ++ VT++ +V
Sbjct: 44 TAFLGYKAGMTHIVREVEKPGSKLHKKETCEAVTIVETPPMVIVGVVAYVKTPRGLRSLN 103
Query: 39 --------------------RTLDK------------NGYMAVQVGAGEAKVKNVSKPMR 66
++ K G ++Q + K +
Sbjct: 104 TVWAQHLSEEVKRRFYKNWCKSKKKAFTKYSKQYETEEGKKSIQAQLEKMKKYASVIRVL 163
Query: 67 GFFS----SVNVSPKKKLFEFRVQKD--------DDLLPVGSVFSPSYFTVGQLVDVTGM 114
K L E +V V + F +++D+ G+
Sbjct: 164 AHTQIRKMKGLKQKKAHLMEIQVNGGTIAQKVDYAYGFFEKQVPVDAIFQKDEMIDIIGV 223
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
T GKG+ G + R L R G P RV AG+ G + T
Sbjct: 224 TKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSFTVARAGQNGYHHRTE 280
Query: 175 KNLEVVSV-------------------------------DDKRGLILVKGCVPGAKKNSW 203
N ++ + K +++KGC G KK
Sbjct: 281 MNKKIYKLGKIEQESHTALTEFDRTEKDITPMGGFPHYGVVKDDYVMIKGCCVGPKKR-V 339
Query: 204 ILVRDSFKSAVNC 216
+ +R S +
Sbjct: 340 VTLRQSLLKQTSR 352
>gi|38327504|gb|AAR17783.1| ribosomal protein L3 [Solanum lycopersicum]
Length = 389
Score = 58.9 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 47/306 (15%), Positives = 78/306 (25%), Gaps = 103/306 (33%)
Query: 3 SGVVARKLGMTCVYNI---EGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + G ++ VT++ +V
Sbjct: 44 TAFLGYKAGMTHIVREVEKPGSKLHKKETCEAVTIVETPPMVIVGVVGYVKTPRGLRCLN 103
Query: 39 -------------------------------RTLDKN-GYMAVQVGAGEAKVKNVSKPMR 66
+ + + G +Q + K +
Sbjct: 104 TVWAQHLSEDIKRRFYKNWCKSKKKAFLKYSKKYETDEGKKDIQAQLEKLKKYACVIRVL 163
Query: 67 GFFS----SVNVSPKKKLFEFRVQKD--------DDLLPVGSVFSPSYFTVGQLVDVTGM 114
K L E +V V + F +++D+ G+
Sbjct: 164 AHTQIRKMKGLKQKKAHLMEIQVNGGSIAQKVDFAYGFFEKQVPVDAVFQKDEMIDIIGV 223
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
T GKG+ G + R L R G P RV AG+ G + T
Sbjct: 224 TKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSFTVARAGQNGYHHRTE 280
Query: 175 KNLEVVSV-------------------------------DDKRGLILVKGCVPGAKKNSW 203
N +V + K +L+KGC G KK
Sbjct: 281 MNKKVYKLGKVGQESHTALTEFDRTEKDITPIGGFPHYGVVKEDYLLIKGCCVGTKKR-V 339
Query: 204 ILVRDS 209
+ +R S
Sbjct: 340 VTLRQS 345
>gi|326911917|ref|XP_003202302.1| PREDICTED: 60S ribosomal protein L3-like [Meleagris gallopavo]
Length = 403
Score = 58.9 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 40/247 (16%), Positives = 66/247 (26%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ VT++ +V
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVQTPRGLRSFK 103
Query: 39 ------------RTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQ 86
R KN + + + + K + S KK RV
Sbjct: 104 TIFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDDEGKKQLEKDFNSMKKYCQVIRVM 163
Query: 87 KD-------------------------------DDLLPVGSVFSPSYFTVGQLVDVTGMT 115
V S F +++DV G+T
Sbjct: 164 AHTQMRLLPLRQKKSHLMEIQVNGGTVAEKVDWAREKLEQQVPVSSVFGQDEMIDVIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV + AG+ G + T
Sbjct: 224 KGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAFSVARAGQKGYHHRTEI 280
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 281 NKKIYKI 287
>gi|57525400|ref|NP_001006241.1| 60S ribosomal protein L3 [Gallus gallus]
gi|53132964|emb|CAG31951.1| hypothetical protein RCJMB04_14e22 [Gallus gallus]
Length = 403
Score = 58.9 bits (141), Expect = 5e-07, Method: Composition-based stats.
Identities = 40/247 (16%), Positives = 67/247 (27%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ VT++ +V
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVIVGIVGYVQTPRGLRSFK 103
Query: 39 ------------RTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQ 86
R KN + + + + K + + S KK RV
Sbjct: 104 TIFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEEGKKQLEKDFNSMKKYCQVIRVM 163
Query: 87 KD-------------------------------DDLLPVGSVFSPSYFTVGQLVDVTGMT 115
V S F +++DV G+T
Sbjct: 164 AHTQMRLLPLRQKKSHLMEIQVNGGTVAEKVDWAREKLEQQVPVSSVFGQDEMIDVIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV + AG+ G + T
Sbjct: 224 KGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAFSVARAGQKGYHHRTEI 280
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 281 NKKIYKI 287
>gi|195453495|ref|XP_002073813.1| GK14309 [Drosophila willistoni]
gi|194169898|gb|EDW84799.1| GK14309 [Drosophila willistoni]
Length = 414
Score = 58.5 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 45/245 (18%), Positives = 64/245 (26%), Gaps = 70/245 (28%)
Query: 5 VVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVV------------------ 36
V K GMT + + G +I VTVL VV
Sbjct: 46 FVGYKAGMTHIVREADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNV 105
Query: 37 --VHRTLD------KNGYMAVQVGAGEAKVKNV----SKPMRGFFSSVNVSPKKKLFEFR 84
H + + KN Y + + +A K K + F + K
Sbjct: 106 WAQHLSEECRRRFYKNWYKSKKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAH 165
Query: 85 VQKDDDLLPVGSVFSPS---------------------------YFTVGQLVDVTGMTIG 117
Q F ++VD G+T G
Sbjct: 166 SQIRLIKQRQKKAHIMEIQLNGGSIEDKVKWVREHLEKPIQVSNVFGQDEMVDCVGVTKG 225
Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
KGF G R + L R G P RV AG+ G + T N
Sbjct: 226 KGFKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVSTTVARAGQKGYHHRTEINK 282
Query: 178 EVVSV 182
++ +
Sbjct: 283 KIYRI 287
>gi|34105772|gb|AAQ62077.1| ribosomal protein L3 [Triticum aestivum]
Length = 384
Score = 58.5 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 45/301 (14%), Positives = 78/301 (25%), Gaps = 98/301 (32%)
Query: 3 SGVVARKLGMTCVYNI-----EGRRIPVTVLHLDNCQVVV----HRTL------------ 41
+ + K GMT + + VT++ +V +T
Sbjct: 44 TAFLGYKAGMTHIVREVELHKKETCEAVTIVETPPIVIVGLVAYVKTPRGLRTLNSVWAQ 103
Query: 42 -----------------------------DKN-GYMAVQVGAGEAKVKNVSKPMRGF--- 68
D + G +Q+ + K +
Sbjct: 104 HLSEDVRRRFYKNWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVIAHTQI 163
Query: 69 -------FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP--SYFTVGQLVDVTGMTIGKG 119
++ + K D P + F +++D+ G+T GKG
Sbjct: 164 RKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGVTKGKG 223
Query: 120 FSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEV 179
+ G + R L R G P RV AG+ G + T N +V
Sbjct: 224 YEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSYTVARAGQNGYHHRTEMNKKV 280
Query: 180 VSV-------------------------------DDKRGLILVKGCVPGAKKNSWILVRD 208
+ K +++KGC G KK + +R
Sbjct: 281 YKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKR-VVTLRQ 339
Query: 209 S 209
S
Sbjct: 340 S 340
>gi|806279|gb|AAA66161.1| ribosomal protein [Arabidopsis thaliana]
Length = 390
Score = 58.5 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 32/152 (21%), Positives = 49/152 (32%), Gaps = 35/152 (23%)
Query: 89 DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGST 148
L V + F +++D+ G+T GKG+ G + R L R
Sbjct: 198 ACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACI 255
Query: 149 GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-------------------------- 182
G P RV AG+ G + T N +V V
Sbjct: 256 G-AWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMTEYDRTEKDITPMGG 314
Query: 183 -----DDKRGLILVKGCVPGAKKNSWILVRDS 209
K +++KGC G KK + +R +
Sbjct: 315 FPHYGIVKEDYLMIKGCCVGPKKR-VVTLRQT 345
>gi|293335791|ref|NP_001168481.1| hypothetical protein LOC100382258 [Zea mays]
gi|223948579|gb|ACN28373.1| unknown [Zea mays]
Length = 253
Score = 58.5 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 31/172 (18%), Positives = 53/172 (30%), Gaps = 36/172 (20%)
Query: 70 SSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHN 128
++ + K D F +++D+ G+T GKG+ G + R
Sbjct: 42 KKAHLMEIQVNGGTIADKVDYGYKFFEEVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWG 101
Query: 129 FGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------ 182
L R G P RV AG+ G + T N +V +
Sbjct: 102 VTRLP--RKTHRGLRKVACIG-AWHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKAGQE 158
Query: 183 ---------DDKRGL----------------ILVKGCVPGAKKNSWILVRDS 209
++ + +++KGC G KK + +R S
Sbjct: 159 SHDASTEFDRTEKDITPMGGFPHYGIIKGDYLMIKGCCVGPKKR-VVTLRQS 209
>gi|326497903|dbj|BAJ94814.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 389
Score = 58.5 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 47/306 (15%), Positives = 82/306 (26%), Gaps = 103/306 (33%)
Query: 3 SGVVARKLGMTCVYNI---EGRRI-------PVTVLHLDNCQVVV----HRTL------- 41
+ + K GMT + G ++ VT++ +V +T
Sbjct: 44 TAFLGYKAGMTHIVREVEKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLN 103
Query: 42 ----------------------------------DKN-GYMAVQVGAGEAKVKNVSKPMR 66
D + G +Q+ + K +
Sbjct: 104 SVWAQHLSEDVRRRFYKNWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVI 163
Query: 67 GFFS----SVNVSPKKKLFEFRVQKD--------DDLLPVGSVFSPSYFTVGQLVDVTGM 114
K L E +V V + F +++D+ G+
Sbjct: 164 AHTQIRKMKGLKQKKAHLMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMIDIIGV 223
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
T GKG+ G + R L R G P RV AG+ G + T
Sbjct: 224 TKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSYTVARAGQNGYHHRTE 280
Query: 175 KNLEVVSV---------------DDKRGL----------------ILVKGCVPGAKKNSW 203
N +V + ++ + +++KGC G KK
Sbjct: 281 MNKKVYKIGKSGQESHEACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKR-V 339
Query: 204 ILVRDS 209
+ +R S
Sbjct: 340 VTLRQS 345
>gi|311334502|emb|CBN08632.1| small nucleolar RNA, C/D box 43 [Microcosmus squamiger]
Length = 404
Score = 58.5 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 53/311 (17%), Positives = 81/311 (26%), Gaps = 108/311 (34%)
Query: 3 SGVVARKLGMTCV----------YNIEGRRIPVTVLHLDNCQVVVH-------------- 38
+ +A K GMT + N + VT+L VV
Sbjct: 44 TAFLAYKAGMTHIVRDVDRPGSKMNKKEVVEAVTILETPPIIVVGVIGYIQTPRGLRTLN 103
Query: 39 ------------RTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRV- 85
R KN Y A + +A K + + KK RV
Sbjct: 104 TIFAEHLSDECKRRFYKNWYSAKKKAFSKACHKWQDEDGKQQIDQDFAKMKKYCTVIRVI 163
Query: 86 ------------------------------QKDDDLLPVGSVFSPSYFTVGQLVDVTGMT 115
+ L V F +++D+ G+T
Sbjct: 164 AHSQMKLLPVRQKKAHLMEIQINGGSIADKVEYARNLLEKPVKVADLFGQDEMIDIIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
G G+ G R + L R G P RV + +G+ G + T
Sbjct: 224 KGHGYKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPARVAFSVARSGQKGYHHRTEI 280
Query: 176 NLEVVSV-------------------------------------DDKRGLILVKGCVPGA 198
N ++ V + K I++KGC G
Sbjct: 281 NKKIYRVGVGIHKEGNKIIKNNASTEVDITDKSITPMGGFPHYGEVKNDFIMIKGCCIGT 340
Query: 199 KKNSWILVRDS 209
KK + +R S
Sbjct: 341 KKR-VLTLRKS 350
>gi|209875731|ref|XP_002139308.1| 60S ribosomal protein L3 [Cryptosporidium muris RN66]
gi|209554914|gb|EEA04959.1| 60S ribosomal protein L3, putative [Cryptosporidium muris RN66]
Length = 390
Score = 58.5 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 42/308 (13%), Positives = 78/308 (25%), Gaps = 98/308 (31%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVHRT--LDKNGYMAVQ 50
+ + K GMT + + G ++ VT++ V G A+
Sbjct: 44 TAFMGYKAGMTHIVRDVDKPGSKLNKKEVVEAVTIIETPPMICVGFVGYIETPRGLKALT 103
Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL------------------- 91
+ + + K + V+
Sbjct: 104 TVFAGYLSEECKRRFYRNYYKSKRKAFTKYAKNYVENQRMEVEIARCKQYCTVIRALCHT 163
Query: 92 ---------------------------------LPVGSVFSPSYFTVGQLVDVTGMTIGK 118
+ S F+ +++DV G++ GK
Sbjct: 164 QVSKTGLNKKKADLMEIQVNGGTVTEKVDFCVRCFEQQIPISSIFSENEMIDVIGISKGK 223
Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
G+ G + R L R G P RV AG+ G + T N +
Sbjct: 224 GYKGVISRWGVTKLP--RKTRRGVRKVSCIG-AWHPARVQFQVPRAGQKGYGQRTEMNKK 280
Query: 179 VVSV----DDKR--------------------------GLILVKGCVPGAKKNSWILVRD 208
+ + D + +++KGC G KK + +R
Sbjct: 281 IYRIGHGDDPRNASTYADLTEKTITPMGGFPRYGVVTQDFVMLKGCTVGCKKR-LLTLRK 339
Query: 209 SFKSAVNC 216
+ V+
Sbjct: 340 ALVPPVSR 347
>gi|94734479|emb|CAK11308.1| mitochondrial ribosomal protein L3 [Danio rerio]
Length = 137
Score = 58.5 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVV 36
R G+VA KLGM V++ G R VT+L + +C VV
Sbjct: 103 RVGLVAIKLGMMPVWSKSGERHVVTMLQVKDCHVV 137
>gi|74185347|dbj|BAE30149.1| unnamed protein product [Mus musculus]
Length = 403
Score = 58.5 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 36/247 (14%), Positives = 64/247 (25%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ VT++ VV
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFK 103
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ D G ++ K +
Sbjct: 104 TVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDDTGKKQLEKDFKSMKKYCQVIRII 163
Query: 67 GF---------FSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMT 115
++ + +K D V F +++DV G+T
Sbjct: 164 AHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV + AG+ G + T
Sbjct: 224 KGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAFSVARAGQKGYHHRTEI 280
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 281 NKKIYKI 287
>gi|66802278|ref|XP_629921.1| 60S ribosomal protein L3 [Dictyostelium discoideum AX4]
gi|464637|sp|P34113|RL3_DICDI RecName: Full=60S ribosomal protein L3
gi|167816|gb|AAA99508.1| ribosomal protein [Dictyostelium discoideum]
gi|60463269|gb|EAL61461.1| 60S ribosomal protein L3 [Dictyostelium discoideum AX4]
Length = 398
Score = 58.5 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 33/153 (21%), Positives = 52/153 (33%), Gaps = 39/153 (25%)
Query: 93 PVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152
+V F +L+DV G+T GKGF+G +KR L R G
Sbjct: 202 FEKTVNVTGVFAENELIDVIGVTKGKGFNGVIKRWGVRKLP--RKTHKGLRKVACIG-AW 258
Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------------------------------ 182
P RV AG++G + +N ++ +
Sbjct: 259 HPSRVSTTVPRAGQLGYHHRVERNKKIYRIGQAQPEDGKQISTGKTEFDLTEKTINPMGG 318
Query: 183 -----DDKRGLILVKGCVPGAKKNSWILVRDSF 210
K +++KGCV G +K + +R S
Sbjct: 319 FAHYGMVKHEFLMLKGCVAGPRKRAL-TLRKSI 350
Score = 35.4 bits (80), Expect = 6.3, Method: Composition-based stats.
Identities = 19/122 (15%), Positives = 34/122 (27%), Gaps = 18/122 (14%)
Query: 3 SGVVARKLGMTCV---YNIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
+ + K GMT V G ++ VT++ +V GY+ G
Sbjct: 44 TAFMGYKAGMTHVVRDLEKPGSKMHKKEIVEAVTIIECPPMYIVGLV-----GYVETAQG 98
Query: 53 ---AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109
+++S R K K + K + S + +
Sbjct: 99 LKTYKTVWAQHLSDNFRRRLYKNWYKSKSKKAFTKYVKQYETEEGKKSIEASLQAIKKRC 158
Query: 110 DV 111
V
Sbjct: 159 SV 160
>gi|145340549|ref|XP_001415385.1| Ribosomal protein L3, component of cytosolic 80S ribosome and 60S
large subunit [Ostreococcus lucimarinus CCE9901]
gi|144575608|gb|ABO93677.1| Ribosomal protein L3, component of cytosolic 80S ribosome and 60S
large subunit [Ostreococcus lucimarinus CCE9901]
Length = 386
Score = 58.5 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 51/302 (16%), Positives = 86/302 (28%), Gaps = 99/302 (32%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVV----HRTLD------ 42
+ + K GMT + + G ++ VT++ VV RT
Sbjct: 44 TAFMGFKAGMTHIVRDVDKPGSKMHKKETCESVTIIECPELIVVGLVGYVRTPKGLRGKK 103
Query: 43 ----------------KNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSP---------- 76
KN + + + + + + + S
Sbjct: 104 TVWAEHLNDEVRRRFYKNWFKSKKKAFTKYTKNYTNGSIDKDLDELKKSCDVIRVIAHTQ 163
Query: 77 ----------KKKLFEFRVQKDD--------DLLPVGSVFSPSYFTVGQLVDVTGMTIGK 118
K + E +V D L +V + F +++D+ G+T GK
Sbjct: 164 VRKVSGLKQKKAHIMEIQVNGGDVAAKVDFGYALFEKAVPVDTVFQQDEMIDLIGVTKGK 223
Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
G+ G + R L R G G P RV AG+ G + T N +
Sbjct: 224 GYEGVVTRWGVTRLP--RKTHRGLRKVGCIG-AWHPSRVSYTVARAGQHGYHHRTEINKK 280
Query: 179 VVSV-------------------------------DDKRGLILVKGCVPGAKKNSWILVR 207
V + K +++KG V G +K I +R
Sbjct: 281 VYKIGKAGQDSFGASTFHDPTEKEITPMGGFAHYGIVKHDYVMIKGGVVGPRKR-LITMR 339
Query: 208 DS 209
S
Sbjct: 340 QS 341
>gi|109100340|ref|XP_001106805.1| PREDICTED: 60S ribosomal protein L3-like isoform 2 [Macaca mulatta]
Length = 403
Score = 58.1 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 36/247 (14%), Positives = 68/247 (27%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ VT++ + VV
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVEMPPMVVVGIAGYVETPRGLRTFK 103
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ D++G ++ K +
Sbjct: 104 TVFAEHMGDECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSTKKYGQVIRVI 163
Query: 67 GF---------FSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMT 115
+++ + +K D V F +++DV G+T
Sbjct: 164 AHTQMRLLPLRQKKAHLTEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G + L R G R P RV + AG+ G + T
Sbjct: 224 KGKGYKGVTSHWHTKKLP--RKTHRGLRKVACIGAR-HPARVAFSVARAGQKGYHHRTEI 280
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 281 NKKIYKI 287
>gi|112982798|ref|NP_001037126.1| ribosomal protein L3 [Bombyx mori]
gi|54609193|gb|AAV34812.1| ribosomal protein L3 [Bombyx mori]
Length = 413
Score = 58.1 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 49/313 (15%), Positives = 79/313 (25%), Gaps = 108/313 (34%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT V + G +I VT++ V
Sbjct: 44 TAFIGYKAGMTHVVREPDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPHGLRALL 103
Query: 39 ------------RTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS--------------- 71
R KN Y + +A K + R
Sbjct: 104 TVWAEHMSEDCRRRFYKNWYKCKKKAFTKASKKWQDELGRKSIEKDFKKMIRYCSVVRVI 163
Query: 72 --------VNVSPKKKLFEFRVQKD--------DDLLPVGSVFSPSYFTVGQLVDVTGMT 115
K + E ++ + S F +++D G+T
Sbjct: 164 AHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV AG+ G + T
Sbjct: 224 KGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVSFTVARAGQKGYHHRTEM 280
Query: 176 NLEVVSV-------------------------------------DDKRGLILVKGCVPGA 198
N ++ + + +++KGC G
Sbjct: 281 NKKIYRIGQGIHKKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGP 340
Query: 199 KKNSWILVRDSFK 211
KK I +R S +
Sbjct: 341 KKR-IITLRKSLR 352
>gi|260790238|ref|XP_002590150.1| hypothetical protein BRAFLDRAFT_126055 [Branchiostoma floridae]
gi|229275339|gb|EEN46161.1| hypothetical protein BRAFLDRAFT_126055 [Branchiostoma floridae]
Length = 404
Score = 58.1 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 50/157 (31%), Gaps = 14/157 (8%)
Query: 37 VHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSP---KKKLFEFRVQKD----- 88
+ D +G ++ + K ++ + ++ K + E +V
Sbjct: 134 AKKWQDDDGKKQIEKDFKQMKKYCINIRVIVHTQMKDLPHRQKKSHIMEIQVNGGTIAEK 193
Query: 89 ---DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSH 145
+ F +++D+ G+T GKGF G R L R
Sbjct: 194 VDWAREHLEKQIPVSQVFGQDEMIDIIGITKGKGFKGVTSRWGTKKLP--RKTHKGLRKV 251
Query: 146 GSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
G P RV AG+ G N T N +V V
Sbjct: 252 ACIG-AWHPARVGYGVARAGQKGYNHRTEINKKVYRV 287
>gi|94468802|gb|ABF18250.1| ribosomal protein L3 [Aedes aegypti]
Length = 415
Score = 58.1 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 40/247 (16%), Positives = 68/247 (27%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVV---------------- 36
+ +A K GMT + + G +I VT+L VV
Sbjct: 44 TAFLAYKAGMTHIVREADRPGSKINKKEVVEAVTILETPPIVVVGAVGYIETPFGPRALC 103
Query: 37 ----VHRTLD------KNGYMAVQVGAGEAKVKNV----SKPMRGFFSSVNVSPKKKLFE 82
H + + KN + + + +A K K + F + K
Sbjct: 104 NVWAQHLSEECRRRFYKNWHASKKKAFTKASKKWTDDLGKKSIEDNFKKMIRYCKFIRVI 163
Query: 83 FR------------------------VQKDDDLLPVGSVFSP---SYFTVGQLVDVTGMT 115
++ + + F +++D +T
Sbjct: 164 AHSQIRLIKQGQKKAHIIEIQLNGGTIEDKVNWVKEHLEKPVPVADVFRQDEMIDCVAVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKGF G R + L R G P RV AG+ G + T
Sbjct: 224 KGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVAFTVARAGQKGYHHRTEI 280
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 281 NKKIYRI 287
>gi|84095076|dbj|BAE66653.1| ribosomal protein L3 [Papilio xuthus]
Length = 412
Score = 58.1 bits (139), Expect = 9e-07, Method: Composition-based stats.
Identities = 48/313 (15%), Positives = 79/313 (25%), Gaps = 108/313 (34%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVV--------------- 37
+ + K GMT V + G +I VT++ V
Sbjct: 44 TAFIGYKAGMTHVVREPDRPGSKINKKEIVEAVTIIETPPMVCVGAVGYIETPHGLRALL 103
Query: 38 -----------HRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSS--------------- 71
R KN Y + +A K + +
Sbjct: 104 TVWAEHMSEDCRRRFYKNWYKCKKKAFTKASKKWQDELGQKSIEKDFKKMIRYCSVIRVI 163
Query: 72 --------VNVSPKKKLFEFRVQKD--------DDLLPVGSVFSPSYFTVGQLVDVTGMT 115
K + E ++ + S F +++D G+T
Sbjct: 164 AHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWAREHLEKPIPVDSVFAQDEMIDCIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV AG+ G + T
Sbjct: 224 KGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVSFTVARAGQKGYHHRTEM 280
Query: 176 NLEVVSV-------------------------------------DDKRGLILVKGCVPGA 198
N ++ + + +++KGC G
Sbjct: 281 NKKIYRIGQGIHTKDGKVIKNNASTEYDLSEKSITPMGGFPHYGEVNNDFVMIKGCCMGP 340
Query: 199 KKNSWILVRDSFK 211
KK I +R S +
Sbjct: 341 KKR-VITLRKSLR 352
>gi|213515418|ref|NP_001133147.1| ribosomal protein L3-like [Salmo salar]
gi|197632147|gb|ACH70797.1| ribosomal protein L3-like [Salmo salar]
Length = 409
Score = 57.7 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 33/156 (21%), Positives = 49/156 (31%), Gaps = 41/156 (26%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
S F +++DV G+T G G G R L R G P RV
Sbjct: 209 SVFYQDEMIDVIGVTKGHGMKGVTSRWGVKKLP--RKTHKGLRKVACIG-AWHPSRVGYT 265
Query: 161 KKMAGRMGGNRVTVKNLEVVSV-------------------------------------D 183
AG+ G + T N ++ + D
Sbjct: 266 IARAGQKGYHHRTELNKKIYRIGKGIHVQDGKVIKNNASTNYDTTQKTITPMGGFPHYGD 325
Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKGK 219
K +++KGCV G +K + +R S + K K
Sbjct: 326 VKNDFLMLKGCVIGCRKR-VLTLRKSMLVHTSRKSK 360
>gi|315115447|gb|ADT80696.1| ribosomal protein L3 [Euphydryas aurinia]
Length = 412
Score = 57.7 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 37/246 (15%), Positives = 64/246 (26%), Gaps = 70/246 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGY------ 46
+ + K GMT V + G +I VT++ V + Y
Sbjct: 44 TAFIGYKAGMTHVVREPDRPGSKINKKEIVEAVTIIETPPMVCVGVVGYIETPYGLRALL 103
Query: 47 --MAVQVGAGEAKVKNVSKPMRGF--FSSVNVSPKKKLFEFRVQKD-------------- 88
A + + + F+ + + +L ++KD
Sbjct: 104 TVWAEHMSEDCRRRFYKNWYKCKKKAFTKSSKKWQDELGRKSIEKDFKKMIRYCSVIRII 163
Query: 89 ---------------------------------DDLLPVGSVFSPSYFTVGQLVDVTGMT 115
+ S F +++D G+T
Sbjct: 164 AHTQMKLLKQRQKKAHLMEIQVNGGTVDDKVKWAREHLEKPIPIDSVFAQDEMIDCIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV AG+ G + T
Sbjct: 224 KGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVSFTVARAGQKGYHHRTEM 280
Query: 176 NLEVVS 181
N ++
Sbjct: 281 NKKIYR 286
>gi|71032875|ref|XP_766079.1| 60S ribosomal protein L3 [Theileria parva strain Muguga]
gi|68353036|gb|EAN33796.1| 60S ribosomal protein L3, putative [Theileria parva]
Length = 384
Score = 57.7 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/138 (20%), Positives = 47/138 (34%), Gaps = 34/138 (24%)
Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
F +++DV G+T G G G + R+ L R G P RV
Sbjct: 206 VFGENEMLDVLGVTKGHGVKGVVSRYGVTRLP--RKTHRGLRKVACIG-SWHPARVQFQV 262
Query: 162 KMAGRMGGNRVTVKNLEVVS-----------VDDK-------------------RGLILV 191
G+ G ++ T +N ++ D +++
Sbjct: 263 PRHGQKGYHKRTERNKKIYRLGLGSSARNGSTDSDLTEKTITPMGGFPHYGVVREDFLML 322
Query: 192 KGCVPGAKKNSWILVRDS 209
KGC+PG +K I +R +
Sbjct: 323 KGCIPGTRKR-VITLRKT 339
>gi|289616290|emb|CBI57086.1| unnamed protein product [Sordaria macrospora]
Length = 392
Score = 57.7 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 45/139 (32%), Gaps = 34/139 (24%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
S F +++DV +T G GF+G R L R G P V
Sbjct: 208 SIFEKDEVIDVIAVTKGHGFTGVTARWGTKKLP--RKTHKGLRKVACIG-AWHPSHVQWT 264
Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
AG+ G + T N ++ + + ++
Sbjct: 265 VARAGQAGYHHRTSVNHKIYRIGKAGAEDSAATEVDVTKKKITPMGGFVRYGEINNDFVM 324
Query: 191 VKGCVPGAKKNSWILVRDS 209
VKG VPG KK + +R S
Sbjct: 325 VKGSVPGVKKR-VMTLRKS 342
>gi|255570998|ref|XP_002526450.1| 60S ribosomal protein L3, putative [Ricinus communis]
gi|223534230|gb|EEF35945.1| 60S ribosomal protein L3, putative [Ricinus communis]
Length = 389
Score = 57.7 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/215 (18%), Positives = 62/215 (28%), Gaps = 47/215 (21%)
Query: 38 HRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFS----SVNVSPKKKLFEFRVQKDD---- 89
+ + G QV + K + K L E +V D
Sbjct: 135 KKFESEEGKKDTQVQLEKMKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGDVAQK 194
Query: 90 ----DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSH 145
V + F +++D+ G+T GKG+ G + R L R
Sbjct: 195 VDFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKV 252
Query: 146 GSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV----------------------- 182
G P RV AG+ G + T N ++ +
Sbjct: 253 ACIG-AWHPARVSFTVARAGQNGYHHRTEMNKKIYKLGKAGHESHSAITEYDRTEKDITP 311
Query: 183 --------DDKRGLILVKGCVPGAKKNSWILVRDS 209
K +++KGC G KK + +R S
Sbjct: 312 IGGFPHYGIVKEDFLMIKGCCVGPKKR-VVTLRQS 345
>gi|307107912|gb|EFN56153.1| hypothetical protein CHLNCDRAFT_35097 [Chlorella variabilis]
Length = 386
Score = 57.7 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 41/139 (29%), Gaps = 35/139 (25%)
Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
F ++VD +T G G G + R L R G P RV
Sbjct: 208 VFNQSEMVDAIAITKGHGTEGVVTRWGVSRLP--RKTHRGLRKVACIG-AWHPARVGWTV 264
Query: 162 KMAGRMGGNRVTVKNLEVVSV-------------------------------DDKRGLIL 190
+G MG N T N +V + K ++
Sbjct: 265 ARSGAMGFNHRTEMNKKVYRIGVKGEESHAATTEHDVTVKDITPMGGFPHYGVVKEDYVM 324
Query: 191 VKGCVPGAKKNSWILVRDS 209
+KG PG K I +R S
Sbjct: 325 IKGACPG-VKRRVITLRKS 342
>gi|242077200|ref|XP_002448536.1| hypothetical protein SORBIDRAFT_06g028650 [Sorghum bicolor]
gi|241939719|gb|EES12864.1| hypothetical protein SORBIDRAFT_06g028650 [Sorghum bicolor]
Length = 389
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 48/149 (32%), Gaps = 35/149 (23%)
Query: 92 LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR 151
V + F +++D+ G+T GKG+ G + R L R G
Sbjct: 201 FFEKEVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-A 257
Query: 152 QDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV----------------------------- 182
P RV AG+ G + T N +V +
Sbjct: 258 WHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKAGQESHDASTEFDRTEKDITPMGGFPH 317
Query: 183 --DDKRGLILVKGCVPGAKKNSWILVRDS 209
K +++KGC G KK + +R S
Sbjct: 318 YGIVKGDYLMIKGCCVGPKKR-VVTLRQS 345
>gi|118152392|gb|ABK63940.1| ribosomal protein L3-A2-II [Triticum aestivum]
Length = 401
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 43/306 (14%), Positives = 80/306 (26%), Gaps = 103/306 (33%)
Query: 3 SGVVARKLGMTCVYNI---EGRRI-------PVTVLHLDNCQVV---------------- 36
+ + K GMT + G ++ VT++ +V
Sbjct: 44 TAFLGYKAGMTHIVREVEKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLN 103
Query: 37 ------------------------------VHRTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ +G +Q+ + K +
Sbjct: 104 SVWAQHLSEDVRRRFYKNWCKSKKKAFTKYALKYDSDSGKKEIQLQLEKMKKYATIVRVI 163
Query: 67 GF----------FSSVNVSPKKKLFEFRVQKDDDLL--PVGSVFSPSYFTVGQLVDVTGM 114
++ + K D V + F ++VD+ G+
Sbjct: 164 AHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYKFFEKEVPVEAVFQKDEMVDIIGV 223
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
T GKG+ G + R L R G P RV AG+ G + T
Sbjct: 224 TKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSYTVARAGQNGYHHRTE 280
Query: 175 KNLEVVSV---------------DDKRGL----------------ILVKGCVPGAKKNSW 203
N ++ + ++ + +++KGC G KK
Sbjct: 281 MNKKIYKMGKSGQESHEACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKR-V 339
Query: 204 ILVRDS 209
+ +R S
Sbjct: 340 VTLRQS 345
>gi|114608746|ref|XP_518669.2| PREDICTED: similar to ribosomal protein L3 [Pan troglodytes]
Length = 383
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 39/247 (15%), Positives = 65/247 (26%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVY----------NIEGRRIPVTVLHLDNCQVVVH-------------- 38
+ + K GMT + N + VT++ VV
Sbjct: 44 TAFLGYKAGMTHIMREVDSPASKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFK 103
Query: 39 ------------RTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQ 86
R KN + + + + + K + ++ S KK R+
Sbjct: 104 TVFAEHISNECKRRFYKNWHTSKKKAFTKYRKKWQDEDVKKQLEKDFSSMKKYCHVIRII 163
Query: 87 KD-------------------------------DDLLPVGSVFSPSYFTVGQLVDVTGMT 115
V F +++DV G+T
Sbjct: 164 AHTQMRLLLLRQKKAHLMEIQVNGGTVAEKLDWVCERLEQQVNVNQVFGKDEMIDVIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV + AG+ G T
Sbjct: 224 KGKGYKGVTSRWHTKKLPRE--THRGLRKVACIG-AWHPARVAFSVARAGQKGYRHRTEI 280
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 281 NKKIYKI 287
>gi|148232513|ref|NP_001087574.1| MGC84749 protein [Xenopus laevis]
gi|51261715|gb|AAH80121.1| MGC84749 protein [Xenopus laevis]
Length = 420
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 40/247 (16%), Positives = 65/247 (26%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVV--------------- 37
+ + K GMT V + G ++ PVT+L +V
Sbjct: 44 TAFLGYKAGMTHVVREVDRPGSKVHKREIVEPVTILECPPMVIVGMVGYAPTARGLRTFK 103
Query: 38 -----------HRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQ 86
R K+ + + +A K + + KK R
Sbjct: 104 TVWAEHLTEECRRRFYKDWCKSKRKAFTKASKKWADEAGLKEINRDLRKIKKYCTVVRAI 163
Query: 87 KDDDLLPVGSVFSPSYFTVGQ-------------------------------LVDVTGMT 115
+ + ++ Q ++DV G+T
Sbjct: 164 AHTQMRLMKHRQKKAHIMEIQVNGGTVAQKVDWIRQHFEKQIPVMNVFAQDEMIDVIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKGF G R + L R G P RV AG+ G T
Sbjct: 224 KGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIG-SWHPARVGSTVARAGQKGYFHRTEL 280
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 281 NKKIYRI 287
>gi|297837293|ref|XP_002886528.1| ARP2/RPL3B [Arabidopsis lyrata subsp. lyrata]
gi|297332369|gb|EFH62787.1| ARP2/RPL3B [Arabidopsis lyrata subsp. lyrata]
Length = 390
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/152 (20%), Positives = 48/152 (31%), Gaps = 35/152 (23%)
Query: 89 DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGST 148
L V + F +++D+ G+T GKG+ G + R L R
Sbjct: 198 ACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACI 255
Query: 149 GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-------------------------- 182
G P RV AG+ G + T N +V V
Sbjct: 256 G-AWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMTEYDRTEKDITPMGG 314
Query: 183 -----DDKRGLILVKGCVPGAKKNSWILVRDS 209
K +++KG G KK + +R +
Sbjct: 315 FPHYGIVKEDYLMIKGGCVGPKKR-VVTLRQT 345
>gi|313227808|emb|CBY22957.1| unnamed protein product [Oikopleura dioica]
Length = 403
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/248 (14%), Positives = 71/248 (28%), Gaps = 71/248 (28%)
Query: 3 SGVVARKLGMTCVYNIE---GRRI-------PVTVLHLDNCQVVV-------------HR 39
+ + K GMT V G I VT++ +V+ +
Sbjct: 44 TAFMGFKAGMTHVVREAEKPGSAINKKEVVEAVTIVETPPLKVIGLTGYIETPDGPRSIK 103
Query: 40 T---------------------------------LDKNGYMAVQVGAGEAKVKNVSKPMR 66
T ++G +++ K + +
Sbjct: 104 TVWANHISDEAKRRFYRSWYSSKKKAFTKASKRWESEDGKKSIERDIAMIKKYSKNVRAI 163
Query: 67 GFFS---SVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSY---------FTVGQLVDVTGM 114
K + E ++ + + + ++ F+ +++DV G+
Sbjct: 164 CHTQMKGLSLRQKKAHIIEIQINGGNGIADKVDWATSNFEKEVSVNTVFSEAEMIDVIGI 223
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
T G+G+ G R + L R G P RV + +G+ G + T
Sbjct: 224 TKGRGYHGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVAFSVARSGQKGYHHRTE 280
Query: 175 KNLEVVSV 182
N +V V
Sbjct: 281 INKKVYRV 288
>gi|118484565|gb|ABK94156.1| unknown [Populus trichocarpa]
Length = 389
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/215 (16%), Positives = 63/215 (29%), Gaps = 47/215 (21%)
Query: 38 HRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFS----SVNVSPKKKLFEFRVQKDD---- 89
+ ++G +Q + K + K L E +V D
Sbjct: 135 KKYESEDGKKDIQAQLEKLKKYCTVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGDVAKK 194
Query: 90 ----DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSH 145
+ + F +++D+ G+T GKG+ G + R L R
Sbjct: 195 VDFAYSFFEKQIPIDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKV 252
Query: 146 GSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV----------------------- 182
G P RV AG+ G + T + ++ +
Sbjct: 253 ACIG-AWHPARVSFTVARAGQNGYHHRTELSKKIYKLGKCGQESHCAVTEYDRTEKDITP 311
Query: 183 --------DDKRGLILVKGCVPGAKKNSWILVRDS 209
K +++KGC G KK + +R S
Sbjct: 312 IGGFPHYGVVKEDYLMIKGCCVGPKKR-VVTLRQS 345
>gi|225465175|ref|XP_002263053.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 219
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 48/149 (32%), Gaps = 35/149 (23%)
Query: 92 LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR 151
+ + F +++D+ G+T GKG+ G + R L R G
Sbjct: 31 FFEKQIPIDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-A 87
Query: 152 QDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV----------------------------- 182
P RV AG+ G + T N ++ V
Sbjct: 88 WHPARVSFTVARAGQNGYHHRTEMNKKIYKVGKTGQESHSAMTEFDRTEKDITPMGGFPH 147
Query: 183 --DDKRGLILVKGCVPGAKKNSWILVRDS 209
K +L+KGC G KK + +R S
Sbjct: 148 YGVVKDDYLLIKGCCVGPKKR-VVTLRQS 175
>gi|71896067|ref|NP_001025612.1| ribosomal protein L3-like [Xenopus (Silurana) tropicalis]
gi|60688143|gb|AAH91070.1| MGC108366 protein [Xenopus (Silurana) tropicalis]
Length = 407
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/247 (16%), Positives = 63/247 (25%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVYNI---EGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT G +I VT++ VV
Sbjct: 44 TAFLGYKAGMTHTLREVHRTGLKISKREEVEAVTIIETPPLVVVGIVGYVETPRGLRSLK 103
Query: 39 ------------RTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRV- 85
R +N Y + + + K + + + KK RV
Sbjct: 104 TIFAEHISDECKRRFYRNWYKSKKKSFTKYSKKWQDEEGKKQLEKDFSAMKKYCKVIRVI 163
Query: 86 ------------------------------QKDDDLLPVGSVFSPSYFTVGQLVDVTGMT 115
V S F +++DV G+T
Sbjct: 164 VHTQMKLLPLRQKKAHVMEIQLNGGTVADKVDWAHEKLEKQVPVNSVFGQDEMIDVIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG G R + L R G P RV AG+ G + T
Sbjct: 224 KGKGVRGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPARVAYTIARAGQKGYHHRTEI 280
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 281 NKKIYRI 287
>gi|47218047|emb|CAG11452.1| unnamed protein product [Tetraodon nigroviridis]
Length = 388
Score = 57.3 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 47/323 (14%), Positives = 79/323 (24%), Gaps = 108/323 (33%)
Query: 3 SGVVARKLGMTCVY----------NIEGRRIPVTVLHLDNCQVVVH-------------- 38
+ + K GMT + VT++ V
Sbjct: 43 TAFLGYKAGMTHTLREVQRVGLKQSKREEVEAVTIIETPPVIVFGVVGYIRTVHGLRSFK 102
Query: 39 ------------RTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRV- 85
R +N Y + + + K + R KK RV
Sbjct: 103 TLFAEHLSDECKRRFYRNWYKSKKKAFTKYSRKWQDQTGRKQLDKEIEQMKKYCSVIRVI 162
Query: 86 ------------------------------QKDDDLLPVGSVFSPSYFTVGQLVDVTGMT 115
+V + F +++D+ G++
Sbjct: 163 VHTQMRLLPISQKKSHIMEVQLNGGSISDKVDWAREHLERAVPVSAVFCQDEMIDIIGVS 222
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
G GF G R + L R G P RV AG+ G + T
Sbjct: 223 KGHGFKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPARVGYTIARAGQKGYHHRTEI 279
Query: 176 NLEVVSV-------------------------------------DDKRGLILVKGCVPGA 198
N ++ + + ++VKGCV G
Sbjct: 280 NKKIFRIGKGVHIQDGKVIRNNASTSYDTSQKTITPMGGFPHYGEVNNDFVMVKGCVVGP 339
Query: 199 KKNSWILVRDSFKSAVNCKGKVS 221
KK + +R S + K + +
Sbjct: 340 KKR-LLTLRKSLLVHTSRKSREA 361
>gi|222424540|dbj|BAH20225.1| AT1G61580 [Arabidopsis thaliana]
Length = 257
Score = 57.3 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/152 (21%), Positives = 49/152 (32%), Gaps = 35/152 (23%)
Query: 89 DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGST 148
L V + F +++D+ G+T GKG+ G + R L R
Sbjct: 65 ACSLFEKQVPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACI 122
Query: 149 GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-------------------------- 182
G P RV AG+ G + T N +V V
Sbjct: 123 G-AWHPARVSYTVARAGQNGYHHRTEMNKKVYRVGKVGQETHSAMTEYDRTEKDITPMGG 181
Query: 183 -----DDKRGLILVKGCVPGAKKNSWILVRDS 209
K +++KGC G KK + +R +
Sbjct: 182 FPHYGIVKEDYLMIKGCCVGPKKR-VVTLRQT 212
>gi|325118597|emb|CBZ54148.1| 60S ribosomal protein L3, related [Neospora caninum Liverpool]
Length = 398
Score = 57.3 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 53/310 (17%), Positives = 79/310 (25%), Gaps = 98/310 (31%)
Query: 3 SGVVARKLGMTCV---YNIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT V + G ++ VTV+ V
Sbjct: 44 TAFMGYKAGMTHVVRELDKPGSKLHKKEIVEAVTVVDTPPMVCVGVVGYIETPRGLRALV 103
Query: 39 ------------RTLDKNGYMAVQVGAGE-----------------AKVKNVSKPMRGFF 69
R KN Y + + + K
Sbjct: 104 TVWAGHLSDECKRRFYKNWYKSKRKAFTKYAKRYGDNNKMEAELTRMKNYCSVIRAICHT 163
Query: 70 SSVNVS---PKKKLFEFRVQKDDDLLPVGSVFSP--------SYFTVGQLVDVTGMTIGK 118
K + E +V V + FT G+++DV G+T G
Sbjct: 164 QPSKTPIGSKKAHVMEIQVNGGSVAEKVDFCTKMFETAVPVKAVFTEGEMLDVIGVTKGH 223
Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
G G + R L R G P RV G+ G T N +
Sbjct: 224 GVKGVVSRWGVTRLP--RKTHRGLRKIACIG-AWHPARVQFQVPRHGQKGYFHRTEMNKK 280
Query: 179 VVSV----DDK--------------------------RGLILVKGCVPGAKKNSWILVRD 208
V V D + +L+KGC+ G KK I R
Sbjct: 281 VYRVGNGADPRNATTESDLTEKRITPMGGFPHYGTVNNDFLLIKGCIVGCKKRP-ITFRK 339
Query: 209 SFKSAVNCKG 218
+ + + K
Sbjct: 340 TLVTRTSRKA 349
>gi|145324164|ref|NP_001077671.1| ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1); structural constituent of
ribosome [Arabidopsis thaliana]
gi|332193833|gb|AEE31954.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
Length = 306
Score = 57.3 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/210 (15%), Positives = 61/210 (29%), Gaps = 47/210 (22%)
Query: 43 KNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQ------------KDDD 90
++G +Q + K + + K+ ++
Sbjct: 57 EDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAHMMEIQINGGTIAQKVDFAY 116
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
+ + F +++D+ G+T GKG+ G + R L R G
Sbjct: 117 SFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG- 173
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV---------------------------- 182
P RV AG+ G + T N ++ +
Sbjct: 174 AWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMTEYDRTEKDVTPMGGFP 233
Query: 183 ---DDKRGLILVKGCVPGAKKNSWILVRDS 209
K +++KGC G KK + +R S
Sbjct: 234 HYGIVKDDYLMIKGCCVGPKKR-VVTLRQS 262
>gi|42565416|gb|AAS20981.1| ribosomal protein L3 [Hyacinthus orientalis]
Length = 263
Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/221 (16%), Positives = 63/221 (28%), Gaps = 47/221 (21%)
Query: 39 RTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFS----SVNVSPKKKLFEFRVQKD------ 88
+ +G +Q + K + K L E +V
Sbjct: 11 KYESDDGKKEIQTQLDKMKKYATVIRVLAHTQLRKMKGLKQKKAHLMEIQVNGGTIAEKV 70
Query: 89 --DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHG 146
+ + F +++D+ G+T GKG+ G + R L R
Sbjct: 71 DYAYGFFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVA 128
Query: 147 STGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV---------------DDKRGL--- 188
G P RV AG+ G + T N ++ + ++ +
Sbjct: 129 CIG-AWHPARVSYTVARAGQNGYHHRTEMNKKIYRLGKSGDESHQAVTEFDRTEKDITPM 187
Query: 189 -------------ILVKGCVPGAKKNSWILVRDSFKSAVNC 216
IL+ GC G KK + +R S +
Sbjct: 188 GGFPHYGVVNDDYILINGCCVGPKKR-VVTLRQSLLKQTSR 227
>gi|326495464|dbj|BAJ85828.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 213
Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/139 (21%), Positives = 46/139 (33%), Gaps = 35/139 (25%)
Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
F +++D+ G+T GKG+ G + R L R G P RV
Sbjct: 35 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSYTV 91
Query: 162 KMAGRMGGNRVTVKNLEVVSV-------------------------------DDKRGLIL 190
AG+ G + T N +V + K ++
Sbjct: 92 ARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLM 151
Query: 191 VKGCVPGAKKNSWILVRDS 209
+KGC G KK + +R S
Sbjct: 152 IKGCCVGPKKR-VVTLRQS 169
>gi|213403598|ref|XP_002172571.1| 60S ribosomal protein L3-A [Schizosaccharomyces japonicus yFS275]
gi|213406091|ref|XP_002173817.1| 60S ribosomal protein L3-A [Schizosaccharomyces japonicus yFS275]
gi|212000618|gb|EEB06278.1| 60S ribosomal protein L3-A [Schizosaccharomyces japonicus yFS275]
gi|212001864|gb|EEB07524.1| 60S ribosomal protein L3-A [Schizosaccharomyces japonicus yFS275]
Length = 388
Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/158 (18%), Positives = 45/158 (28%), Gaps = 34/158 (21%)
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
+V S F ++VDV G+T GKG G R L R G
Sbjct: 197 EHFEKTVDVKSVFEQNEIVDVIGITKGKGVEGVTTRWGTKRLP--RKTHRGLRKVACIG- 253
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV---------------------------- 182
P V AG G T N ++ +
Sbjct: 254 AWHPSNVGWTVARAGNNGYMHRTQLNSKIYRIGSGDDAKNGATDFDATEKRITPMGGFVR 313
Query: 183 --DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+ +++ G PG K + +R S + + K
Sbjct: 314 YGSVENDYVMLNGATPGPVKR-VLTLRKSLFAHTSRKA 350
>gi|15218306|ref|NP_175009.1| ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1); structural constituent of
ribosome [Arabidopsis thaliana]
gi|42571751|ref|NP_973966.1| ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1); structural constituent of
ribosome [Arabidopsis thaliana]
gi|79319275|ref|NP_001031146.1| ARP1 (ARABIDOPSIS RIBOSOMAL PROTEIN 1); structural constituent of
ribosome [Arabidopsis thaliana]
gi|27735225|sp|P17094|RL31_ARATH RecName: Full=60S ribosomal protein L3-1; AltName: Full=Protein
EMBRYO DEFECTIVE 2207
gi|11935191|gb|AAG42011.1|AF327421_1 putative ribosomal protein [Arabidopsis thaliana]
gi|13487800|gb|AAK27726.1|AF361101_1 putative ribosomal protein [Arabidopsis thaliana]
gi|13605657|gb|AAK32822.1|AF361809_1 At1g43170/F1I21_18 [Arabidopsis thaliana]
gi|3617741|gb|AAC36018.1| L3 cytoplasmic ribosomal protein [Arabidopsis thaliana]
gi|14517418|gb|AAK62599.1| At1g43170/F1I21_18 [Arabidopsis thaliana]
gi|15450559|gb|AAK96457.1| At1g43170/F1I21_18 [Arabidopsis thaliana]
gi|15982761|gb|AAL09721.1| At1g43170/F1I21_18 [Arabidopsis thaliana]
gi|332193830|gb|AEE31951.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
gi|332193831|gb|AEE31952.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
gi|332193832|gb|AEE31953.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
gi|332193834|gb|AEE31955.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
gi|332193835|gb|AEE31956.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
gi|332193836|gb|AEE31957.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
gi|332193837|gb|AEE31958.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
gi|332193838|gb|AEE31959.1| 60S ribosomal protein L3-1 [Arabidopsis thaliana]
Length = 389
Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/210 (15%), Positives = 61/210 (29%), Gaps = 47/210 (22%)
Query: 43 KNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQ------------KDDD 90
++G +Q + K + + K+ ++
Sbjct: 140 EDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAHMMEIQINGGTIAQKVDFAY 199
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
+ + F +++D+ G+T GKG+ G + R L R G
Sbjct: 200 SFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG- 256
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV---------------------------- 182
P RV AG+ G + T N ++ +
Sbjct: 257 AWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMTEYDRTEKDVTPMGGFP 316
Query: 183 ---DDKRGLILVKGCVPGAKKNSWILVRDS 209
K +++KGC G KK + +R S
Sbjct: 317 HYGIVKDDYLMIKGCCVGPKKR-VVTLRQS 345
>gi|23397228|gb|AAN31896.1| putative ribosomal protein [Arabidopsis thaliana]
Length = 389
Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/210 (15%), Positives = 61/210 (29%), Gaps = 47/210 (22%)
Query: 43 KNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQ------------KDDD 90
++G +Q + K + + K+ ++
Sbjct: 140 EDGKKGIQAQLEKMKKYATVIRVLAHTQIRKMKGLKQKKAHMMEIQINGGTIAQKVDFAY 199
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
+ + F +++D+ G+T GKG+ G + R L R G
Sbjct: 200 SFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG- 256
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV---------------------------- 182
P RV AG+ G + T N ++ +
Sbjct: 257 AWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMTEYDRTEKDVTPMGGFP 316
Query: 183 ---DDKRGLILVKGCVPGAKKNSWILVRDS 209
K +++KGC G KK + +R S
Sbjct: 317 HYGIVKDDYLMIKGCCVGPKKR-VVTLRQS 345
>gi|67472477|ref|XP_652042.1| 60S ribosomal protein L3 [Entamoeba histolytica HM-1:IMSS]
gi|67473369|ref|XP_652451.1| 60S ribosomal protein L3 [Entamoeba histolytica HM-1:IMSS]
gi|67475438|ref|XP_653413.1| 60S ribosomal protein L3 [Entamoeba histolytica HM-1:IMSS]
gi|167386238|ref|XP_001737679.1| 60S ribosomal protein L3 [Entamoeba dispar SAW760]
gi|167388407|ref|XP_001738553.1| 60S ribosomal protein L3 [Entamoeba dispar SAW760]
gi|56468865|gb|EAL46673.1| 60S ribosomal protein L3, putative [Entamoeba histolytica
HM-1:IMSS]
gi|56469305|gb|EAL47065.1| 60S ribosomal protein L3, putative [Entamoeba histolytica
HM-1:IMSS]
gi|56470361|gb|EAL48027.1| 60S ribosomal protein L3, putative [Entamoeba histolytica
HM-1:IMSS]
gi|165898153|gb|EDR25097.1| 60S ribosomal protein L3, putative [Entamoeba dispar SAW760]
gi|165899449|gb|EDR26038.1| 60S ribosomal protein L3, putative [Entamoeba dispar SAW760]
Length = 402
Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 47/138 (34%), Gaps = 33/138 (23%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
S F + +DV +T G G++G +KR L R G P RV
Sbjct: 209 SVFGTDECIDVCSVTKGHGYNGVIKRFGVRHLP--RKTHRGLRKVACVG-AWHPARVSWT 265
Query: 161 KKMAGRMGGNRVTVKNLEVVSV-----------------------------DDKRGLILV 191
AG+MG + T N ++ + K +++
Sbjct: 266 VARAGQMGFFKRTEVNKKIYRLGCGDLKNAKTEFDITEKGITPMGGFPHYGVVKNDFLMI 325
Query: 192 KGCVPGAKKNSWILVRDS 209
KG V G ++ I +R +
Sbjct: 326 KGTVAGIRRR-VISLRKA 342
>gi|309268181|ref|XP_001475783.2| PREDICTED: 60S ribosomal protein L3-like [Mus musculus]
Length = 403
Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/247 (14%), Positives = 60/247 (24%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G + VT++ VV
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSEVNKKEVVEAVTIVENPPMVVVGIVGYVENPRGLRTFK 103
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ D G ++ K +
Sbjct: 104 TVFAEHISNECKRRFYKNWHKSKKKAFTKYCKKWQDDTGKKQLEKDFNSMKKYCQVIRII 163
Query: 67 GFFSSVN---VSPKKKLFEFRVQKD--------DDLLPVGSVFSPSYFTVGQLVDVTGMT 115
K E V V F +++DV G+T
Sbjct: 164 AHTQMHLLPLCQKKAHFMEIPVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV + AG+ G + T
Sbjct: 224 KGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAFSVARAGQKGYHYRTEI 280
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 281 NKKIYKI 287
>gi|115487526|ref|NP_001066250.1| Os12g0167900 [Oryza sativa Japonica Group]
gi|548770|sp|P35684|RL3_ORYSJ RecName: Full=60S ribosomal protein L3
gi|303853|dbj|BAA02155.1| ribosomal protein L3 [Oryza sativa Japonica Group]
gi|77553113|gb|ABA95909.1| 60S ribosomal protein L3, putative, expressed [Oryza sativa
Japonica Group]
gi|113648757|dbj|BAF29269.1| Os12g0167900 [Oryza sativa Japonica Group]
gi|125578626|gb|EAZ19772.1| hypothetical protein OsJ_35352 [Oryza sativa Japonica Group]
gi|146141390|tpg|DAA01059.1| TPA_inf: ribosomal protein L3A [Oryza sativa (japonica
cultivar-group)]
gi|146141404|tpg|DAA01151.1| TPA_inf: ribosomal protein L3A [Oryza sativa (japonica
cultivar-group)]
gi|215686363|dbj|BAG87624.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 389
Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 50/149 (33%), Gaps = 35/149 (23%)
Query: 92 LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR 151
+ + F +++D+ G+T GKG+ G + R L R G
Sbjct: 201 FFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-A 257
Query: 152 QDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV---------------DDKRGL-------- 188
P RV AG+ G + T N +V + ++ +
Sbjct: 258 WHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHAACTEFDRTEKDITPMGGFPH 317
Query: 189 --------ILVKGCVPGAKKNSWILVRDS 209
+++KGC G KK + +R S
Sbjct: 318 YGVVKGDYLMIKGCCVGPKKR-VVTLRQS 345
>gi|34105768|gb|AAQ62075.1| ribosomal protein L3 [Triticum aestivum]
gi|34105770|gb|AAQ62076.1| ribosomal protein L3 [Triticum aestivum]
gi|34105774|gb|AAQ62078.1| ribosomal protein L3 [Triticum aestivum]
gi|118152389|gb|ABK63938.1| ribosomal protein L3-B3 [Triticum aestivum]
gi|118152400|gb|ABK63944.1| ribosomal protein L3-B1 [Triticum aestivum]
gi|146141392|tpg|DAA01144.1| TPA_inf: ribosomal protein L3B-3 [Triticum aestivum]
gi|146141396|tpg|DAA01146.1| TPA_inf: ribosomal protein L3B-1 [Triticum aestivum]
Length = 389
Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 46/313 (14%), Positives = 81/313 (25%), Gaps = 103/313 (32%)
Query: 3 SGVVARKLGMTCVYNI---EGRRI-------PVTVLHLDNCQVVV----HRTL------- 41
+ + K GMT + G ++ VT++ +V +T
Sbjct: 44 TAFLGYKAGMTHIVREVEKPGSKLHKKETCEAVTIVETPPIVIVGLVAYVKTPRGLRTLN 103
Query: 42 ----------------------------------DKN-GYMAVQVGAGEAKVKNVSKPMR 66
D + G +Q+ + K +
Sbjct: 104 SVWAQHLSEDVRRRFYKNWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYATVVRVI 163
Query: 67 GF----------FSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSP--SYFTVGQLVDVTGM 114
++ + K D P + F +++D+ G+
Sbjct: 164 AHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYNFFEKEVPIDAVFQKDEMIDIIGV 223
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
T GKG+ G + R L R G P RV AG+ G + T
Sbjct: 224 TKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSYTVARAGQNGYHHRTE 280
Query: 175 KNLEVVSV-------------------------------DDKRGLILVKGCVPGAKKNSW 203
N +V + K +++KGC G KK
Sbjct: 281 MNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLMIKGCCVGPKKR-V 339
Query: 204 ILVRDSFKSAVNC 216
+ +R S +
Sbjct: 340 VTLRQSLLKQTSR 352
>gi|71984550|ref|NP_001021256.1| Ribosomal Protein, Large subunit family member (rpl-3)
[Caenorhabditis elegans]
gi|50507482|emb|CAH04728.1| C. elegans protein F13B10.2d, confirmed by transcript evidence
[Caenorhabditis elegans]
gi|51011805|emb|CAH10798.1| C. elegans protein F13B10.2d, confirmed by transcript evidence
[Caenorhabditis elegans]
Length = 303
Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/218 (16%), Positives = 63/218 (28%), Gaps = 49/218 (22%)
Query: 37 VHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFF----------SSVNVSPKKKLFEFRVQ 86
+ D++G ++ + K S + + V + +
Sbjct: 36 AKKWQDEDGKKLIEADFAKLKKYCSSIRVIAHTQMKILRRRQKKAHLVEIQVNGGTIEQK 95
Query: 87 KDDDLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSH 145
D + F +++D G+T G GF G R + L R
Sbjct: 96 VDWAREHLEKQVQVDTVFAQDEMIDTIGVTRGHGFKGVTSRWHTKKLP--RKTHKGLRKV 153
Query: 146 GSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-------DDKRG----------- 187
G P RV AG+ G + T+ N ++ + + K
Sbjct: 154 ACIG-AWHPSRVAFTVARAGQKGFHHRTIINNKIYRIGKSALTEEGKNNGSTEFDLTQKT 212
Query: 188 ----------------LILVKGCVPGAKKNSWILVRDS 209
I+++G V G KK I +R S
Sbjct: 213 ITPMGGFPRYGIVNQDYIMLRGAVLGPKKR-LITLRKS 249
>gi|167377647|ref|XP_001734483.1| 60S ribosomal protein L3 [Entamoeba dispar SAW760]
gi|165904006|gb|EDR29379.1| 60S ribosomal protein L3, putative [Entamoeba dispar SAW760]
Length = 381
Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 47/138 (34%), Gaps = 33/138 (23%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
S F + +DV +T G G++G +KR L R G P RV
Sbjct: 188 SVFGTDECIDVCSVTKGHGYNGVIKRFGVRHLP--RKTHRGLRKVACVG-AWHPARVSWT 244
Query: 161 KKMAGRMGGNRVTVKNLEVVSV-----------------------------DDKRGLILV 191
AG+MG + T N ++ + K +++
Sbjct: 245 VARAGQMGFFKRTEVNKKIYRLGCGDLKNAKTEFDITEKGITPMGGFPHYGVVKNDFLMI 304
Query: 192 KGCVPGAKKNSWILVRDS 209
KG V G ++ I +R +
Sbjct: 305 KGTVAGIRRR-VISLRKA 321
>gi|37625025|gb|AAQ96336.1| ribosomal protein L3B [Nicotiana tabacum]
Length = 409
Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/215 (17%), Positives = 61/215 (28%), Gaps = 47/215 (21%)
Query: 38 HRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFS----SVNVSPKKKLFEFRVQKDD---- 89
+ +G + + K + K L E +V D
Sbjct: 155 KKYETDDGKKDINAQLEKMKKYCCVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGDVSQK 214
Query: 90 ----DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSH 145
+ + F +++D+ G+T GKG+ G + R L R
Sbjct: 215 VDYAYGFFEKQIPVDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKV 272
Query: 146 GSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV----------------------- 182
G P RV AG+ G + T N +V +
Sbjct: 273 ACIG-AWHPARVSYTVARAGQNGYHHRTELNKKVYRLGKAGQESHSAITEFDRTEKDITP 331
Query: 183 --------DDKRGLILVKGCVPGAKKNSWILVRDS 209
K +L+KGC G KK + +R S
Sbjct: 332 MGGFPHYGIVKEDFLLIKGCCVGPKKR-VVTLRQS 365
Score = 34.6 bits (78), Expect = 9.4, Method: Composition-based stats.
Identities = 22/146 (15%), Positives = 41/146 (28%), Gaps = 12/146 (8%)
Query: 3 SGVVARKLGMTCV---YNIEGRRIP-------VTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
+ + K GMT + G ++ VT++ VV K +
Sbjct: 44 TAFLGYKAGMTHIVRDVEKPGSKLHKKETCELVTIIETPPMIVVGVVGYVKTPRGLRCLS 103
Query: 53 AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
+++S+ ++ F KKK F +K + S +
Sbjct: 104 --TVWAQHLSEEIKRRFYKNWCMSKKKAFAKYSKKYETDNWCMSKKKAFAKYSKKYETDD 161
Query: 113 GMTIGKGFSGAMKRHNFGGLRATHGV 138
G MK++ H
Sbjct: 162 GKKDINAQLEKMKKYCCVIRVLAHTQ 187
>gi|289743297|gb|ADD20396.1| ribosomal protein L3 [Glossina morsitans morsitans]
Length = 413
Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 42/245 (17%), Positives = 64/245 (26%), Gaps = 70/245 (28%)
Query: 5 VVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVV------------------ 36
+ K GM+ + + G +I VTVL VV
Sbjct: 46 FIGYKAGMSHIVREADRPGSKINKKEVVEAVTVLETPPMIVVGAVGYIETPFGLRALVNV 105
Query: 37 --VHRTLD------KNGYMAVQVGAGEAKVKNV----SKPMRGFFSSVNVSPKKKLFEFR 84
H + + KN Y + + +A K K + F + K
Sbjct: 106 WAQHLSEECRRRFYKNWYKSQKKAFTKASKKWGDDLGKKSIENDFRKMLRYCKVIRVIAH 165
Query: 85 VQKDDDLLPVGSVFSPS---------------------------YFTVGQLVDVTGMTIG 117
Q F +++D G+T G
Sbjct: 166 SQIRLIKQRQKKAHIMEIQLNGGSIEDKVKWVREHLEKPVAVSNVFGQDEMIDCIGVTKG 225
Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
KGF G R + L R G P RV AG+ G + T N
Sbjct: 226 KGFKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVSTTVARAGQKGYHHRTEINK 282
Query: 178 EVVSV 182
++ +
Sbjct: 283 KIYRI 287
>gi|225466938|ref|XP_002262711.1| PREDICTED: hypothetical protein, partial [Vitis vinifera]
Length = 299
Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 49/157 (31%), Gaps = 15/157 (9%)
Query: 38 HRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFS----SVNVSPKKKLFEFRVQKDD---- 89
+ ++G +Q + K + K L E +V D
Sbjct: 135 KKYESEDGKKDIQAQLEKMKKYCNVIRVLAHTQIRKMKGLKQKKAHLMEIQVNGGDVAKK 194
Query: 90 ----DLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSH 145
+ + F +++D+ G+T GKG+ G + R L R
Sbjct: 195 VDYAYGFFEKQIPIDAIFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKV 252
Query: 146 GSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
G P RV AG+ G + T N ++ V
Sbjct: 253 ACIG-AWHPARVSFTVARAGQNGYHHRTEMNKKIYKV 288
>gi|158291770|ref|XP_313303.4| AGAP003556-PA [Anopheles gambiae str. PEST]
gi|157017447|gb|EAA08849.4| AGAP003556-PA [Anopheles gambiae str. PEST]
Length = 417
Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 40/246 (16%), Positives = 64/246 (26%), Gaps = 70/246 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVV---------------- 36
+ +A K GMT + + G +I VT+L VV
Sbjct: 44 TAFLAYKAGMTHIVREADRPGSKINKKEVVEAVTILETPPLVVVGAVGYIETPFGPRALC 103
Query: 37 ----VHRTLD------KNGYMAVQVGAGEAKVKNVSK----PMRGFFSSVNVSPKKKLFE 82
H + + KN + + + +A K + F + K
Sbjct: 104 NVWAQHLSEECRRRFYKNWHASKKKAFTKASKKWTDDLGKKSIEDTFKKMVRYCKFIRVI 163
Query: 83 FRVQKDDDLLPVGSVFSPS---------------------------YFTVGQLVDVTGMT 115
Q F+ +++D +T
Sbjct: 164 AHSQIRLIKQGQKKAHIIEIQLNGGSIADKVNWVKEHLEKPIPVSQVFSQDEMIDCVAVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKGF G R + L R G P RV AG+ G + T
Sbjct: 224 KGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVAFTVARAGQKGYHHRTEL 280
Query: 176 NLEVVS 181
N ++
Sbjct: 281 NKKIYR 286
>gi|118152402|gb|ABK63945.1| ribosomal protein L3-B2 [Triticum aestivum]
gi|118152404|gb|ABK63946.1| ribosomal protein L3-B2 [Triticum aestivum]
gi|146141394|tpg|DAA01145.1| TPA_inf: ribosomal protein L3B-2 [Triticum aestivum]
Length = 389
Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 47/146 (32%), Gaps = 35/146 (23%)
Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
F +++D+ G+T GKG+ G + R L R G P RV
Sbjct: 211 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSYTV 267
Query: 162 KMAGRMGGNRVTVKNLEVVSV-------------------------------DDKRGLIL 190
AG+ G + T N +V + K ++
Sbjct: 268 ARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKADYLM 327
Query: 191 VKGCVPGAKKNSWILVRDSFKSAVNC 216
+KGC G KK + +R S +
Sbjct: 328 IKGCCVGPKKR-VVTLRQSLLKQTSR 352
>gi|219121047|ref|XP_002185755.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209582604|gb|ACI65225.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 389
Score = 56.5 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 48/158 (30%), Gaps = 34/158 (21%)
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
L V S F + +DV G+T G G+ G R L R G
Sbjct: 197 NLFEKEVTVDSIFAKDEQIDVLGVTRGHGYEGVTTRWGVSRLP--RKTHRGLRKVACIG- 253
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV---------------------------- 182
P RV AG+ G T N +V V
Sbjct: 254 SWHPARVSTTVPRAGQNGYFHRTEMNKKVYRVGKKGDEASCQTDADLTKKSITPMGGFVH 313
Query: 183 --DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+ K +++KG + G KK I +R S + K
Sbjct: 314 YGEVKEDWLMLKGAIVGVKKRPLI-LRKSLMKHSSRKH 350
>gi|168026163|ref|XP_001765602.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683240|gb|EDQ69652.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 392
Score = 56.5 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/155 (20%), Positives = 48/155 (30%), Gaps = 37/155 (23%)
Query: 95 GSVFSPS-YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153
S F +++D+ G+T G G+ G + R L R G
Sbjct: 203 EKWVSVDAVFRKDEMIDIIGVTRGHGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWH 259
Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSV------------------------------- 182
P RV AG+ G + T N +V V
Sbjct: 260 PARVSFTVARAGQNGYHHRTEMNKKVYKVGKAEDKQSFGASTEFDVTEKEITPMGGFAHY 319
Query: 183 -DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
+ +++KG V G KK I +R S V+
Sbjct: 320 GIVREDYLMLKGGVMGPKKR-VITLRQSLYKQVSR 353
Score = 35.0 bits (79), Expect = 7.3, Method: Composition-based stats.
Identities = 18/142 (12%), Positives = 40/142 (28%), Gaps = 17/142 (11%)
Query: 5 VVARKLGMTCVYNI---EGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG 54
+ K GMT + G ++ VT++ VV K +
Sbjct: 46 FLGYKAGMTHIVREVEKPGSKLHKKETCEAVTIVETPPMIVVGLVAYIKTPRGLRSLN-- 103
Query: 55 EAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGM 114
+++S ++ F KKK F ++ + + + +
Sbjct: 104 TVWAQHLSDEVKRRFYKNWSKSKKKAFSNYSKRYESEEGKK-----DVESELERMKKYAS 158
Query: 115 TIGKGFSGAMKRHNFGGLRATH 136
I +++ + H
Sbjct: 159 VIRVLAHTQVRKLKGIKQKKAH 180
>gi|281204054|gb|EFA78250.1| 60S ribosomal protein L3 [Polysphondylium pallidum PN500]
Length = 399
Score = 56.5 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/161 (20%), Positives = 55/161 (34%), Gaps = 39/161 (24%)
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
+V S F +++D+ G+T GKGF+G +KR L R G
Sbjct: 198 ENFEKTVTVESVFAENEMIDIIGVTKGKGFNGVIKRWGVRKLP--RKTHKGLRKVACIG- 254
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV---------------------------- 182
P RV AG++G + N ++ +
Sbjct: 255 AWHPSRVSTAVPRAGQLGYHHRVETNKKIYRIGKAQPATGTSIPTGATEFDITHKTITPM 314
Query: 183 -------DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
K +++KGCV G +K + +R S +A +
Sbjct: 315 GGFVHYGVVKHEFLMIKGCVTGPRKR-VLTLRKSLHAATSR 354
>gi|264667433|gb|ACY71302.1| ribosomal protein L3 [Chrysomela tremulae]
Length = 414
Score = 56.5 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 30/82 (36%), Gaps = 3/82 (3%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
F +++D G+T G G+ G R + L R G P RV
Sbjct: 209 EVFAQDEMIDCIGVTKGHGYKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVSFT 265
Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
AG+ G + T N ++ +
Sbjct: 266 VARAGQKGYHHRTEMNKKIYRI 287
>gi|115484365|ref|NP_001065844.1| Os11g0168200 [Oryza sativa Japonica Group]
gi|62701923|gb|AAX92996.1| ribosomal protein L3, putative [Oryza sativa Japonica Group]
gi|62734368|gb|AAX96477.1| ribosomal protein L3, putative [Oryza sativa Japonica Group]
gi|77548788|gb|ABA91585.1| 60S ribosomal protein L3, putative, expressed [Oryza sativa
Japonica Group]
gi|113644548|dbj|BAF27689.1| Os11g0168200 [Oryza sativa Japonica Group]
gi|125533541|gb|EAY80089.1| hypothetical protein OsI_35258 [Oryza sativa Indica Group]
gi|125576343|gb|EAZ17565.1| hypothetical protein OsJ_33102 [Oryza sativa Japonica Group]
gi|146141406|tpg|DAA01152.1| TPA_inf: ribosomal protein L3B [Oryza sativa (japonica
cultivar-group)]
gi|146141408|tpg|DAA01150.1| TPA_inf: ribosomal protein L3B [Oryza sativa]
gi|215706975|dbj|BAG93435.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215715327|dbj|BAG95078.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 389
Score = 56.5 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 46/304 (15%), Positives = 81/304 (26%), Gaps = 103/304 (33%)
Query: 5 VVARKLGMTCVYNI---EGRRI-------PVTVLHLDNCQVVV----HRTL--------- 41
V K GMT + G ++ VT++ VV +T
Sbjct: 46 FVGYKAGMTHIVREVEKPGSKLHKKETCEAVTIIETPPIVVVGLVAYVKTPRGLRSLNSV 105
Query: 42 --------------------------------DKN-GYMAVQVGAGEAKVKNVSKPMRGF 68
D + G +Q+ + K +
Sbjct: 106 WAQHLSEEVRRRFYKNWCKSKKKAFTKYALKYDSDAGKKEIQMQLEKMKKYASVVRVIVH 165
Query: 69 ----------FSSVNVSPKKKLFEFRVQKDDDLL--PVGSVFSPSYFTVGQLVDVTGMTI 116
++ + K D + + F +++D+ G+T
Sbjct: 166 TQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYKFFEKEIPVDAVFQKDEMIDIIGVTK 225
Query: 117 GKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKN 176
GKG+ G + R L R G P RV AG+ G + T N
Sbjct: 226 GKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSYTVARAGQNGYHHRTEMN 282
Query: 177 LEVVSV---------------DDKRGL----------------ILVKGCVPGAKKNSWIL 205
+V + ++ + +++KGC G KK +
Sbjct: 283 KKVYKIGKSGQESHAACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKR-VVT 341
Query: 206 VRDS 209
+R S
Sbjct: 342 LRQS 345
>gi|82596814|ref|XP_726417.1| ribosomal protein L3 [Plasmodium yoelii yoelii str. 17XNL]
gi|23481819|gb|EAA17982.1| ribosomal protein L3, putative [Plasmodium yoelii yoelii]
Length = 386
Score = 56.5 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 42/306 (13%), Positives = 80/306 (26%), Gaps = 96/306 (31%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVV--------------- 37
+ + K GM+ + + G ++ T++ VV
Sbjct: 44 TAFMGYKSGMSHIVREVDKPGSKLHKKEIVEACTIVECAPMVVVGMVGYRETPKGLKVLT 103
Query: 38 -----------HRTLDKNGYMAVQVGAGEAKVKNVSKPMRGF------------------ 68
R KN Y + + + + + +
Sbjct: 104 AVWANHVSDEFRRRYYKNWYKSDKKAFTKCLNIPDTTKEKLYNRIEKYCTILRAVCHTQP 163
Query: 69 ------FSSVNVSPKKKLFEFRVQ--KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGF 120
++ + L ++ + F +++DV +T G G
Sbjct: 164 SKTPLRLKKAHIMEIQINGGHMKDKINFVKELLEKNIPVTNVFNTNEMIDVISVTKGHGT 223
Query: 121 SGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVV 180
G + R+ L R G P RV G+ G T +N ++
Sbjct: 224 KGVVSRYGVKRLP--RKTHRGLRKVACIG-AWHPARVQFQVPRHGQKGYFHRTERNKKIY 280
Query: 181 SVDDKR------------------------------GLILVKGCVPGAKKNSWILVRDSF 210
+ K+ IL+KGC+ G KK I +R +
Sbjct: 281 RIGLKKDKNNASTDADITEKKITPMGGFPHYGVVNEDFILLKGCISGTKKRP-ITLRKTL 339
Query: 211 KSAVNC 216
V+
Sbjct: 340 VPQVSR 345
>gi|183235559|ref|XP_001914254.1| 60S ribosomal protein L3 [Entamoeba histolytica HM-1:IMSS]
gi|169800490|gb|EDS88972.1| 60S ribosomal protein L3, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 350
Score = 56.5 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/138 (21%), Positives = 47/138 (34%), Gaps = 33/138 (23%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
S F + +DV +T G G++G +KR L R G P RV
Sbjct: 157 SVFGTDECIDVCSVTKGHGYNGVIKRFGVRHLP--RKTHRGLRKVACVG-AWHPARVSWT 213
Query: 161 KKMAGRMGGNRVTVKNLEVVSV-----------------------------DDKRGLILV 191
AG+MG + T N ++ + K +++
Sbjct: 214 VARAGQMGFFKRTEVNKKIYRLGCGDLKNAKTEFDITEKGITPMGGFPHYGVVKNDFLMI 273
Query: 192 KGCVPGAKKNSWILVRDS 209
KG V G ++ I +R +
Sbjct: 274 KGTVAGIRRR-VISLRKA 290
>gi|297795267|ref|XP_002865518.1| hypothetical protein ARALYDRAFT_917513 [Arabidopsis lyrata subsp.
lyrata]
gi|297311353|gb|EFH41777.1| hypothetical protein ARALYDRAFT_917513 [Arabidopsis lyrata subsp.
lyrata]
Length = 375
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/198 (17%), Positives = 61/198 (30%), Gaps = 39/198 (19%)
Query: 44 NGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-Y 102
+G +Q + K + + + + + + G++
Sbjct: 141 DGRKGIQAQLEKMKKYGTIIRVLAHTQIRKMKGLTQKKAHMM---EIQINGGTIIPIDAV 197
Query: 103 FTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKK 162
F +++DV G+T GKG+ G + R L R G P RV
Sbjct: 198 FQKDEMIDVIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLREVACIG-AWHPARVSYTVA 254
Query: 163 MAGRMGGNRVTVKNLEVVSV-------------------------------DDKRGLILV 191
AG+ G + T N ++ + K +++
Sbjct: 255 RAGQNGYHHRTELNKKIYRLGKVGTETHSAMTEYDRTEKEITPMGGFAHYGIVKDDYLMI 314
Query: 192 KGCVPGAKKNSWILVRDS 209
KGC G KK + +R S
Sbjct: 315 KGCCMGPKKR-VVTLRQS 331
>gi|313103624|pdb|3IZ5|C Chain C, Localization Of The Large Subunit Ribosomal Proteins Into
A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s
Ribosome
gi|315113296|pdb|3IZR|C Chain C, Localization Of The Large Subunit Ribosomal Proteins Into
A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s
Ribosome
gi|33526877|gb|AAQ21396.1| ribosomal protein L3 [Triticum aestivum]
gi|33526922|gb|AAQ21399.1| ribosomal protein L3 [Triticum aestivum]
gi|34105776|gb|AAQ62079.1| ribosomal protein L3 [Triticum aestivum]
gi|118152406|gb|ABK63947.1| ribosomal protein L3-A1 [Triticum aestivum]
gi|146141402|tpg|DAA01149.1| TPA_inf: ribosomal protein L3A-1 [Triticum aestivum]
Length = 389
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 47/306 (15%), Positives = 82/306 (26%), Gaps = 103/306 (33%)
Query: 3 SGVVARKLGMTCVYNI---EGRRI-------PVTVLHLDNCQVVV----HRTL------- 41
+ + K GMT + G ++ VT++ +V +T
Sbjct: 44 TAFLGYKAGMTHIVREVEKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLN 103
Query: 42 ----------------------------------DKN-GYMAVQVGAGEAKVKNVSKPMR 66
D + G +Q+ + K +
Sbjct: 104 SVWAQHLSEDVRRRFYKNWCKSKKKAFTKYALKYDSDAGKKEIQLQLEKMKKYATIVRVI 163
Query: 67 GFFS----SVNVSPKKKLFEFRVQKD--------DDLLPVGSVFSPSYFTVGQLVDVTGM 114
K L E +V V + F ++VD+ G+
Sbjct: 164 AHTQIRKMKGLKQKKAHLMEIQVNGGTIADKVDYGYKFFEKEVPVEAVFQKDEMVDIIGV 223
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
T GKG+ G + R L R G P RV AG+ G + T
Sbjct: 224 TKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSYTVARAGQNGYHHRTE 280
Query: 175 KNLEVVSV---------------DDKRGL----------------ILVKGCVPGAKKNSW 203
N ++ + ++ + +++KGC G KK
Sbjct: 281 MNKKIYKMGKSGQESHEACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKR-V 339
Query: 204 ILVRDS 209
+ +R S
Sbjct: 340 VTLRQS 345
>gi|323455903|gb|EGB11771.1| hypothetical protein AURANDRAFT_36266 [Aureococcus anophagefferens]
Length = 393
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 32/142 (22%), Positives = 45/142 (31%), Gaps = 33/142 (23%)
Query: 92 LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR 151
L V + F +++DV G T G G G + R L R G
Sbjct: 202 LFEQEVPVDTVFNANEMIDVLGATRGHGTEGVVTRWGVTRLP--RKTHRGLRKVACIG-A 258
Query: 152 QDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV----DDK---------------------- 185
P RV +G+ G + T N ++ + D K
Sbjct: 259 WHPSRVSFTVARSGQNGYHHRTEMNKKIYRIGKSGDAKSASTEADLTEKSITPMGGFPHY 318
Query: 186 ----RGLILVKGCVPGAKKNSW 203
I+VKGCV G+KK
Sbjct: 319 GEVNEDWIMVKGCVVGSKKRCL 340
Score = 37.3 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 19/119 (15%), Positives = 33/119 (27%), Gaps = 12/119 (10%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
+ +A K GMT V + G ++ VTVL VV + +
Sbjct: 44 TAFMAYKAGMTHVVRDVDRPGSKVHKKEIVEAVTVLEAPPMVVVGLVGYVETPRGLRSLA 103
Query: 53 AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDV 111
+S+ ++ F K+K K + + V
Sbjct: 104 --TVWAAFLSEEVKRRFYKNWYKSKRKAMTKYAAKYSASDGGEKDVDRELERIKKYCSV 160
>gi|297846744|ref|XP_002891253.1| hypothetical protein ARALYDRAFT_473757 [Arabidopsis lyrata subsp.
lyrata]
gi|297337095|gb|EFH67512.1| hypothetical protein ARALYDRAFT_473757 [Arabidopsis lyrata subsp.
lyrata]
Length = 389
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 48/149 (32%), Gaps = 35/149 (23%)
Query: 92 LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR 151
+ + F +++D+ G+T GKG+ G + R L R G
Sbjct: 201 FFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-A 257
Query: 152 QDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV----------------------------- 182
P RV AG+ G + T N ++ +
Sbjct: 258 WHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHSAMTEYDRTEKDVTPMGGFPH 317
Query: 183 --DDKRGLILVKGCVPGAKKNSWILVRDS 209
K +++KGC G KK + +R S
Sbjct: 318 YGVVKDDYLMIKGCCVGPKKR-VVTLRQS 345
>gi|170041842|ref|XP_001848658.1| 60S ribosomal protein L3 [Culex quinquefasciatus]
gi|167865417|gb|EDS28800.1| 60S ribosomal protein L3 [Culex quinquefasciatus]
Length = 452
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/84 (25%), Positives = 30/84 (35%), Gaps = 3/84 (3%)
Query: 99 SPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVF 158
F ++VD +T GKGF G R + L R G P RV
Sbjct: 244 VADVFGQDEMVDCVAVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVA 300
Query: 159 KNKKMAGRMGGNRVTVKNLEVVSV 182
AG+ G + T N ++ +
Sbjct: 301 FTVARAGQKGYHHRTEINKKIYRI 324
>gi|37909690|gb|AAP23996.1| ribosomal protein L3B [Oryza sativa Indica Group]
Length = 345
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/149 (19%), Positives = 50/149 (33%), Gaps = 35/149 (23%)
Query: 92 LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR 151
+ + F +++D+ G+T GKG+ G + R L R G
Sbjct: 190 FFEKEIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-A 246
Query: 152 QDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV---------------DDKRGL-------- 188
P RV AG+ G + T N +V + ++ +
Sbjct: 247 WHPARVSYTVARAGQNGYHHRTEMNKKVYKIGKSGQESHAACTEFDRTEKDITPMGGFPH 306
Query: 189 --------ILVKGCVPGAKKNSWILVRDS 209
+++KGC G KK + +R S
Sbjct: 307 YGVVKGDYLMIKGCCVGPKKR-VVTLRQS 334
>gi|298705189|emb|CBJ28620.1| Ribosomal protein L3 [Ectocarpus siliculosus]
Length = 423
Score = 55.8 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/148 (21%), Positives = 48/148 (32%), Gaps = 34/148 (22%)
Query: 92 LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR 151
L V + F + +DV G + G G G + R L R G
Sbjct: 231 LFEQKVPVDAVFAKDECIDVLGASKGHGTEGVVTRWGVTRLP--RKTHRGLRKVACIG-A 287
Query: 152 QDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKRGL----------------------- 188
P RV + AG+ G + T N ++ + K +
Sbjct: 288 WHPARVSFSVARAGQHGYHHRTELNKKIYRIGKKGDVASASTEADLTVKHITPLGGFPHY 347
Query: 189 -------ILVKGCVPGAKKNSWILVRDS 209
+++KGCV G KK I +R S
Sbjct: 348 GEINEDWLMLKGCVIGCKKRC-ITLRKS 374
>gi|224004980|ref|XP_002296141.1| RL3, ribosomal protein 3, 60S large ribosomal subunit
[Thalassiosira pseudonana CCMP1335]
gi|209586173|gb|ACI64858.1| RL3, ribosomal protein 3, 60S large ribosomal subunit
[Thalassiosira pseudonana CCMP1335]
Length = 395
Score = 55.8 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 48/157 (30%), Gaps = 34/157 (21%)
Query: 92 LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR 151
L V S F +L+DV G+T G G+ G R L R G
Sbjct: 201 LFEKEVTVDSVFAKDELIDVLGVTKGHGYEGVTTRWGVSRLP--RKTHRGLRKVACIG-S 257
Query: 152 QDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-----------DDK--------------- 185
P RV AG+ G + T N ++ + D
Sbjct: 258 WHPARVSDTVPRAGQNGYHHRTEMNKKIYRIGKKGDNSSCQTDADLTEKSITPMGGFVHY 317
Query: 186 ----RGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+++KG G KK I +R S + K
Sbjct: 318 GQIREDWVMIKGACVGVKKRPLI-LRKSLMKHSSRKH 353
>gi|115675312|ref|XP_001202265.1| PREDICTED: similar to Mitochondrial ribosomal protein L3, partial
[Strongylocentrotus purpuratus]
gi|115711825|ref|XP_780771.2| PREDICTED: similar to Mitochondrial ribosomal protein L3, partial
[Strongylocentrotus purpuratus]
Length = 98
Score = 55.8 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
+ F SV + K+ + F V D+ L G+ ++F G VD+ TI KGF G
Sbjct: 3 EEYADLFKSVCLPVKEHITSFNVT-DNAALQPGTPLYAAHFRPGMYVDIAAKTIDKGFQG 61
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159
MKR G A+HG + +HR G +G DPGR++
Sbjct: 62 VMKRWGMKGQPASHGATKTHRKMGGSGGGGDPGRIWP 98
>gi|196000674|ref|XP_002110205.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190588329|gb|EDV28371.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 399
Score = 55.8 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 50/140 (35%), Gaps = 34/140 (24%)
Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
F+ +++D+ G T GKGF G R L R G P RV +
Sbjct: 216 VFSQDEMIDIIGATKGKGFRGVTFRWGTKKLP--RKTHKGLRKVACIG-SWHPSRVGFSI 272
Query: 162 KMAGRMGGNRVTVKNLEVVSV----DDKR--------------------------GLILV 191
AG+ G + T N ++ + D+K I++
Sbjct: 273 ARAGQTGYHHRTEVNKKIYRIGSGKDEKNASTGYDTTVKKITPVGGFPHYGVVTQDYIML 332
Query: 192 KGCVPGAKKNSWILVRDSFK 211
KGCV G KK I +R S +
Sbjct: 333 KGCVMGPKKR-VITLRKSRR 351
>gi|33526886|gb|AAQ21397.1| ribosomal protein L3 [Triticum aestivum]
gi|33526907|gb|AAQ21398.1| ribosomal protein L3 [Triticum aestivum]
gi|34105766|gb|AAQ62074.1| ribosomal protein L3 [Triticum aestivum]
gi|118152391|gb|ABK63939.1| ribosomal protein L3-A2-I [Triticum aestivum]
gi|118152394|gb|ABK63941.1| ribosomal protein L3-A2 [Triticum aestivum]
gi|146141398|tpg|DAA01147.1| TPA_inf: ribosomal protein L3A-2 [Triticum aestivum]
Length = 389
Score = 55.8 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 43/306 (14%), Positives = 80/306 (26%), Gaps = 103/306 (33%)
Query: 3 SGVVARKLGMTCVYNI---EGRRI-------PVTVLHLDNCQVV---------------- 36
+ + K GMT + G ++ VT++ +V
Sbjct: 44 TAFLGYKAGMTHIVREVEKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPRGLRTLN 103
Query: 37 ------------------------------VHRTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ +G +Q+ + K +
Sbjct: 104 SVWAQHLSEDVRRRFYKNWCKSKKKAFTKYALKYDSDSGKKEIQLQLEKMKKYATIVRVI 163
Query: 67 GF----------FSSVNVSPKKKLFEFRVQKDDDLL--PVGSVFSPSYFTVGQLVDVTGM 114
++ + K D V + F ++VD+ G+
Sbjct: 164 AHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYKFFEKEVPVEAVFQKDEMVDIIGV 223
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
T GKG+ G + R L R G P RV AG+ G + T
Sbjct: 224 TKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSYTVARAGQNGYHHRTE 280
Query: 175 KNLEVVSV---------------DDKRGL----------------ILVKGCVPGAKKNSW 203
N ++ + ++ + +++KGC G KK
Sbjct: 281 MNKKIYKMGKSGQESHEACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKR-V 339
Query: 204 ILVRDS 209
+ +R S
Sbjct: 340 VTLRQS 345
>gi|195389887|ref|XP_002053605.1| GJ23255 [Drosophila virilis]
gi|194151691|gb|EDW67125.1| GJ23255 [Drosophila virilis]
Length = 415
Score = 55.8 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 40/245 (16%), Positives = 62/245 (25%), Gaps = 70/245 (28%)
Query: 5 VVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVV------------------ 36
+ K GMT + + G +I VT+L V
Sbjct: 46 FIGYKAGMTHIVREADRPGSKINKKEVVEAVTILETPPMIAVGAVGYIETPFGLRALVNV 105
Query: 37 --VHRTLD------KNGYMAVQVGAGEAKVKNVSK----PMRGFFSSVNVSPKKKLFEFR 84
H + + KN Y + + +A K + F + K
Sbjct: 106 WAQHLSEECRRRFYKNWYKSQKKAFTKASKKWTDDLGKKSIENDFRKMLRYCKVIRVIAH 165
Query: 85 VQKDDDLLPVGSVFSPS---------------------------YFTVGQLVDVTGMTIG 117
Q F +++D G+T G
Sbjct: 166 SQIRLINQRQKKAHIMEIQLNGGSIEDKVKWVREHLEKPIQVRNVFGQDEMIDCVGVTKG 225
Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
KGF G R + L R G P RV AG+ G + T N
Sbjct: 226 KGFKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVSTTVARAGQKGYHHRTEINK 282
Query: 178 EVVSV 182
++ +
Sbjct: 283 KIYRI 287
>gi|73973628|ref|XP_868292.1| PREDICTED: similar to 60S ribosomal protein L3 (L4) isoform 4
[Canis familiaris]
Length = 302
Score = 55.8 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/180 (18%), Positives = 58/180 (32%), Gaps = 37/180 (20%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVS 62
+ + K GMT + R +D+ G + + K +
Sbjct: 44 TAFLGYKAGMTHI----------------------VREVDRPGSKMRLLPLRQKKAHLME 81
Query: 63 KPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSG 122
+ G V+ K R++ V F +++DV G+T GKG+ G
Sbjct: 82 IQVNG----GTVAEKLDWARERLE--------QQVPVNQVFGQDEMIDVIGVTKGKGYKG 129
Query: 123 AMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
R + L R G P RV + AG+ G + T N ++ +
Sbjct: 130 VTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAFSMARAGQKGYHHRTEINKKIYKI 186
>gi|84998982|ref|XP_954212.1| 60S ribosomal protein l3 [Theileria annulata]
gi|65305210|emb|CAI73535.1| 60S ribosomal protein l3, putative [Theileria annulata]
Length = 173
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/132 (21%), Positives = 46/132 (34%), Gaps = 34/132 (25%)
Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167
++DV G+T G G G + R+ L R G P RV G+
Sbjct: 1 MLDVLGVTKGHGVKGVVSRYGVTRLP--RKTHRGLRKVACIG-SWHPARVQFQVPRHGQK 57
Query: 168 GGNRVTVKNLEVVSV-----------DDK-------------------RGLILVKGCVPG 197
G ++ T +N ++ + D +++KGC+PG
Sbjct: 58 GYHKRTERNKKIYRIGLGNCNRNGSTDSDLTEKTITPMGGFPHYGVVREDFLMLKGCIPG 117
Query: 198 AKKNSWILVRDS 209
KK I +R +
Sbjct: 118 TKKR-VITLRKT 128
>gi|237834163|ref|XP_002366379.1| 60S ribosomal protein L3, putative [Toxoplasma gondii ME49]
gi|211964043|gb|EEA99238.1| 60S ribosomal protein L3, putative [Toxoplasma gondii ME49]
gi|221486606|gb|EEE24867.1| 60S ribosomal protein L3, putative [Toxoplasma gondii GT1]
gi|221508362|gb|EEE33949.1| 60S ribosomal protein L3, putative [Toxoplasma gondii VEG]
Length = 389
Score = 55.8 bits (133), Expect = 5e-06, Method: Composition-based stats.
Identities = 50/295 (16%), Positives = 73/295 (24%), Gaps = 97/295 (32%)
Query: 3 SGVVARKLGMTCV---YNIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT V + G ++ VTV+ V
Sbjct: 44 TAFMGYKAGMTHVVRELDKPGSKLHKKEIVEAVTVVDTPPMVCVGVVGYIETPRGLRALV 103
Query: 39 ------------RTLDKNGYMAVQVGAGE-----------------AKVKNVSKPMRGFF 69
R KN Y + + + K
Sbjct: 104 TVWAGHLSDECKRRFYKNWYKSKRKAFTKYAKRYGDNNKMEAELTRMKNYCSVIRAICHT 163
Query: 70 SSVNVS---PKKKLFEFRVQKDDDLLPVGSVFSP--------SYFTVGQLVDVTGMTIGK 118
K + E +V V + FT G+++DV G+T G
Sbjct: 164 QPSKTPIGSKKAHVMEIQVNGGSIAEKVDFCTKMFETAVPVKAVFTEGEMIDVIGVTKGH 223
Query: 119 GFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLE 178
G G + R L R G P RV G+ G T N +
Sbjct: 224 GVKGVVSRWGVTRLP--RKTHRGLRKIACIG-AWHPARVQFQVPRHGQKGYFHRTEMNKK 280
Query: 179 VVSV----DDK--------------------------RGLILVKGCVPGAKKNSW 203
V V D + +L+KGC+ G KK
Sbjct: 281 VYRVGNGADPRNATTESDLTEKRITPMGGFPHYGTVNNDFLLLKGCIVGCKKRPI 335
>gi|78190599|gb|ABB29621.1| ribosomal protein 3 large subunit [Priapulus caudatus]
Length = 319
Score = 55.4 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/146 (21%), Positives = 47/146 (32%), Gaps = 41/146 (28%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
S F +++D+ G+T G GF G R + L R G P RV
Sbjct: 154 SVFAADEMIDMVGVTKGHGFKGVTSRWHCKKLP--RKTHKGLRKVACIG-AWHPSRVQFT 210
Query: 161 KKMAGRMGGNRVTVKNLEVVSV-------------------------------------D 183
AG+ G + T N +V + +
Sbjct: 211 VARAGQKGYHHRTEINKKVYRIAEGIHTKDGKVIKNNAATDFDLSDKSITPMGGFPHYGE 270
Query: 184 DKRGLILVKGCVPGAKKNSWILVRDS 209
+ I++KGC G KK I +R S
Sbjct: 271 VRNDFIMIKGCCMGPKKR-IITLRKS 295
>gi|320166087|gb|EFW42986.1| ribosomal protein L3 isoform b [Capsaspora owczarzaki ATCC 30864]
Length = 416
Score = 55.4 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 52/142 (36%), Gaps = 37/142 (26%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
F+ ++VDV G+T GKGF+G R L R G P V ++
Sbjct: 229 DVFSENEMVDVIGVTRGKGFTGVTYRFGTRRLP--RKSHKGLRKVACIG-AWHPANVNRS 285
Query: 161 KKMAGRMGGNRVTVKNLEVVSV-----------------DDKRGL--------------- 188
AG+ G + T N ++ V ++ +
Sbjct: 286 VARAGQKGYHHRTELNKKIYRVGAGASSGAKNNASTEYDITEKNITPLGGFPHYGQVKED 345
Query: 189 -ILVKGCVPGAKKNSWILVRDS 209
+++KGC+ GAKK I +R S
Sbjct: 346 FLILKGCIMGAKKR-VITLRKS 366
>gi|5762260|dbj|BAA83471.1| Csf-3 [Cucumis sativus]
Length = 219
Score = 55.4 bits (132), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 48/156 (30%), Gaps = 35/156 (22%)
Query: 92 LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR 151
V + F +++D+ G+T GKG+ G + R L R G
Sbjct: 31 FFEKQVPVEAVFQKDEMIDLIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-A 87
Query: 152 QDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV----------------------------- 182
P RV AG+ G + T N +V +
Sbjct: 88 WHPARVSFTVARAGQNGYHHRTEMNKKVYKIGKTGQESHTAITEFDRTEKDITPMGGFPH 147
Query: 183 --DDKRGLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
K +++KG G KK I +R S +
Sbjct: 148 YGIVKSDYLMIKGGCVGPKKR-VITLRQSLLKQTSR 182
>gi|118152396|gb|ABK63942.1| ribosomal protein L3-A3 [Triticum aestivum]
gi|118152398|gb|ABK63943.1| ribosomal protein L3-A3 [Triticum aestivum]
gi|146141400|tpg|DAA01148.1| TPA_inf: ribosomal protein L3A-3 [Triticum aestivum]
Length = 389
Score = 55.0 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 44/306 (14%), Positives = 79/306 (25%), Gaps = 103/306 (33%)
Query: 3 SGVVARKLGMTCVYNI---EGRRI-------PVTVLHLDNCQVVVHRTLDKN-------- 44
+ + K GMT + G ++ VT++ +V K
Sbjct: 44 TAFLGYKAGMTHIVREVEKPGSKLHKKETCEAVTIIETPPLVIVGLVAYVKTPCGLRTLN 103
Query: 45 --------------------------------------GYMAVQVGAGEAKVKNVSKPMR 66
G +Q+ + K +
Sbjct: 104 SVWAQHLSEDVRRRFYKNWCKSKKKAFTKYALKYDCDAGKKEIQLQLEKMKKYATIVRVI 163
Query: 67 GF----------FSSVNVSPKKKLFEFRVQKDDDLL--PVGSVFSPSYFTVGQLVDVTGM 114
++ + K D V + F ++VD+ G+
Sbjct: 164 AHTQIRKMKGLKQKKAHLMEIQINGGTIADKVDYGYKFFEKEVPVEAVFQKDEMVDIIGV 223
Query: 115 TIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTV 174
T GKG+ G + R L R G P RV AG+ G + T
Sbjct: 224 TKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSYTVARAGQNGYHHRTE 280
Query: 175 KNLEVVSV---------------DDKRGL----------------ILVKGCVPGAKKNSW 203
N ++ + ++ + +++KGC G KK
Sbjct: 281 MNKKIYKMGKSGQESHEACTEFDRTEKDITPMGGFPHYGVVKGDYLMIKGCCVGPKKR-V 339
Query: 204 ILVRDS 209
+ +R S
Sbjct: 340 VTLRQS 345
>gi|146331892|gb|ABQ22452.1| mitochondrial 39S ribosomal protein L3-like protein [Callithrix
jacchus]
Length = 76
Score = 55.0 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Query: 179 VVSVDDKRGLILVKGCVPGAKKNSWILVRDSFKSAVN 215
V ++ K +I V G VPG KN + VRDS A
Sbjct: 1 VWRINTKHNIIYVNGSVPG-HKNCLVKVRDSKLPAYK 36
>gi|126649185|ref|XP_001388265.1| hypothetical protein [Cryptosporidium parvum Iowa II]
gi|126117187|gb|EAZ51287.1| hypothetical protein cgd5_1580 [Cryptosporidium parvum Iowa II]
gi|323508581|dbj|BAJ77184.1| cgd5_1580 [Cryptosporidium parvum]
gi|323509637|dbj|BAJ77711.1| cgd5_1580 [Cryptosporidium parvum]
Length = 305
Score = 55.0 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 48/145 (33%), Gaps = 34/145 (23%)
Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
F +++D+ G++ GKG+ G + R L R G P RV
Sbjct: 124 IFNENEMIDIIGISKGKGYKGVISRWGVTKLP--RKTRRGVRKVSCIG-AWHPARVQFQV 180
Query: 162 KMAGRMGGNRVTVKNLEVVSV----DDKR--------------------------GLILV 191
AG+ G + T N ++ + D + +++
Sbjct: 181 PRAGQKGYGQRTETNKKIYRIGRGDDPRNASTSADLTEKTITPMGGFPRYGVVNQDFLML 240
Query: 192 KGCVPGAKKNSWILVRDSFKSAVNC 216
KGC G KK + +R S V
Sbjct: 241 KGCTVGCKKR-LLTLRKSLVPPVTR 264
>gi|148223643|ref|NP_001088030.1| ribosomal protein L3-like [Xenopus laevis]
gi|52221158|gb|AAH82692.1| LOC494722 protein [Xenopus laevis]
Length = 407
Score = 55.0 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 38/247 (15%), Positives = 61/247 (24%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCV----------YNIEGRRIPVTVLHLDNCQVVVH-------------- 38
+ + K GMT + VT++ VV
Sbjct: 44 TAFLGYKAGMTHTLREIHRPGLKISKREEVEAVTIIETPPLVVVGIVGYVETPRGLRSLK 103
Query: 39 ------------RTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRV- 85
R +N Y + + + K + + + KK RV
Sbjct: 104 TIFAEHISDECKRRFYRNWYKSKKKSFTKYCKKWQDEEGKKQLEKDFSAMKKYCKVIRVI 163
Query: 86 ------------------------------QKDDDLLPVGSVFSPSYFTVGQLVDVTGMT 115
V + F +++DV G+T
Sbjct: 164 IHTQMKLLPLRQKKAHVMEIQLNGGTVAEKVDWAHEKLEKQVPINTVFCQDEMIDVIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG G R + L R G P RV AG+ G + T
Sbjct: 224 KGKGVRGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPARVAYTIARAGQKGYHHRTEI 280
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 281 NKKIYRI 287
>gi|255641019|gb|ACU20789.1| unknown [Glycine max]
Length = 323
Score = 55.0 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 21/91 (23%), Positives = 33/91 (36%), Gaps = 3/91 (3%)
Query: 92 LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR 151
+ + F +++D+ G+T GKG+ G + R L R G
Sbjct: 201 FFEKQIPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-A 257
Query: 152 QDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV AG+ G + T N + V
Sbjct: 258 WHPARVSFTVARAGQNGYHHRTELNKRIYKV 288
>gi|167535326|ref|XP_001749337.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772203|gb|EDQ85858.1| predicted protein [Monosiga brevicollis MX1]
Length = 419
Score = 55.0 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 29/82 (35%), Gaps = 3/82 (3%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
F+ + +D+ G+T G GF G R L R G P V
Sbjct: 228 DVFSQNEHIDIIGVTKGHGFEGVTHRWGTKKLP--RKTHKGLRKVACIG-AWHPANVTYA 284
Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
AG+ G + T N ++ +
Sbjct: 285 VPRAGQRGYHHRTEMNKKIYRI 306
>gi|67594775|ref|XP_665877.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54656728|gb|EAL35641.1| hypothetical protein Chro.50225 [Cryptosporidium hominis]
Length = 305
Score = 55.0 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 48/145 (33%), Gaps = 34/145 (23%)
Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
F +++D+ G++ GKG+ G + R L R G P RV
Sbjct: 124 IFNENEMIDIIGISKGKGYKGVISRWGVTKLP--RKTRRGVRKVSCIG-AWHPARVQFQV 180
Query: 162 KMAGRMGGNRVTVKNLEVVSV----DDKR--------------------------GLILV 191
AG+ G + T N ++ + D + +++
Sbjct: 181 PRAGQKGYGQRTETNKKIYRIGRGDDPRNASTSADLTEKTITPMGGFPRYGVVNQDFLML 240
Query: 192 KGCVPGAKKNSWILVRDSFKSAVNC 216
KGC G KK + +R S V
Sbjct: 241 KGCTVGCKKR-LLTLRKSLVPPVTR 264
>gi|78190797|gb|ABB29720.1| ribosomal protein 3 large subunit [Monosiga brevicollis]
Length = 332
Score = 55.0 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 29/82 (35%), Gaps = 3/82 (3%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
F+ + +D+ G+T G GF G R L R G P V
Sbjct: 160 DVFSQNEHIDIIGVTKGHGFEGVTHRWGTKKLP--RKTHKGLRKVACIG-AWHPANVTYA 216
Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
AG+ G + T N ++ +
Sbjct: 217 VPRAGQRGYHHRTEMNKKIYRI 238
>gi|78190703|gb|ABB29673.1| ribosomal protein 3 large subunit [Leucosolenia sp. AR-2003]
Length = 319
Score = 54.6 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 51/153 (33%), Gaps = 41/153 (26%)
Query: 94 VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153
+ F +++DV G+T GKGF G R + L R G
Sbjct: 147 EKHMHVNKVFGQDEMIDVIGVTRGKGFKGVTSRWHCKKLP--RKTHKGLRKVACIG-AWH 203
Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSV------------------------------- 182
P RV + AG+ G + T N +V V
Sbjct: 204 PSRVQYSVARAGQKGYHHRTEVNKKVYRVGAGYHQEGNKVIKNNAATGFDLTDKSITPMG 263
Query: 183 ------DDKRGLILVKGCVPGAKKNSWILVRDS 209
+ K+ +++KGC+ G KK + +R +
Sbjct: 264 GFPHYGELKQDFLMLKGCIMGPKKR-VVTLRKT 295
>gi|296219367|ref|XP_002755828.1| PREDICTED: 60S ribosomal protein L3-like [Callithrix jacchus]
Length = 424
Score = 54.6 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 37/208 (17%), Positives = 63/208 (30%), Gaps = 44/208 (21%)
Query: 42 DKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLP---VGSVF 98
D +G +Q K + + F + +L V + V
Sbjct: 164 DTDGKKQLQKDFAAMKNHVLQMKLLPFRQKKAHIMEIQLNGGTVAEKVAWAQARLEKQVP 223
Query: 99 SPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVF 158
S F+ +++DV +T G+G G R + L R G P RV
Sbjct: 224 VHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPARVG 280
Query: 159 KNKKMAGRMGGNRVTVKNLEVVSV------------------------------------ 182
+ AG+ G + T N ++ +
Sbjct: 281 CSIARAGQKGYHHRTELNKKIYRIGRGLHMEDGKLVKNNASTSYDVTAKSITPLGGFPHY 340
Query: 183 -DDKRGLILVKGCVPGAKKNSWILVRDS 209
+ +++KGC+ G KK I +R S
Sbjct: 341 GEVNNDFVMLKGCIAGTKKR-VITLRKS 367
>gi|166858|gb|AAA66160.1| ribosomal protein [Arabidopsis thaliana]
Length = 389
Score = 54.6 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 34/210 (16%), Positives = 61/210 (29%), Gaps = 47/210 (22%)
Query: 43 KNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQ------------KDDD 90
++G +Q + K + + K+ ++
Sbjct: 140 EDGKKGIQAQLEKVKKYATVIRVLAHTQIRKMKGLKQKKAHMMEIQINGGTIAQKVDFAY 199
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
+ + F +++D+ G+T GKG+ G + R L R G
Sbjct: 200 SFFEKQIPIEAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG- 256
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV---------------------------- 182
P RV AG+ G + T N ++ +
Sbjct: 257 AWHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGTEAHTAMTEYDRTEKDVTPMGGFP 316
Query: 183 ---DDKRGLILVKGCVPGAKKNSWILVRDS 209
K ++KGC GAKK + +R S
Sbjct: 317 HYGIVKDDYFMIKGCCVGAKKR-VVTLRQS 345
>gi|323510289|dbj|BAJ78038.1| cgd5_1580 [Cryptosporidium parvum]
Length = 388
Score = 54.6 bits (130), Expect = 9e-06, Method: Composition-based stats.
Identities = 29/145 (20%), Positives = 48/145 (33%), Gaps = 34/145 (23%)
Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
F +++D+ G++ GKG+ G + R L R G P RV
Sbjct: 207 IFNENEMIDIIGISKGKGYKGVISRWGVTKLP--RKTRRGVRKVSCIG-AWHPARVQFQV 263
Query: 162 KMAGRMGGNRVTVKNLEVVSV----DDKR--------------------------GLILV 191
AG+ G + T N ++ + D + +++
Sbjct: 264 PRAGQKGYGQRTETNKKIYRIGRGDDPRNASTSADLTEKTITPMGGFPRYGVVNQDFLML 323
Query: 192 KGCVPGAKKNSWILVRDSFKSAVNC 216
KGC G KK + +R S V
Sbjct: 324 KGCTVGCKKR-LLTLRKSLVPPVTR 347
>gi|302769558|ref|XP_002968198.1| hypothetical protein SELMODRAFT_270706 [Selaginella moellendorffii]
gi|300163842|gb|EFJ30452.1| hypothetical protein SELMODRAFT_270706 [Selaginella moellendorffii]
Length = 389
Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
S F +++DV G+T G G+ G + R L R G P RV
Sbjct: 210 SVFRKDEMIDVIGVTKGHGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSFT 266
Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
AG+ G + T N ++ +
Sbjct: 267 VARAGQNGYHHRTEMNKKIYKI 288
>gi|302788822|ref|XP_002976180.1| hypothetical protein SELMODRAFT_267945 [Selaginella moellendorffii]
gi|300156456|gb|EFJ23085.1| hypothetical protein SELMODRAFT_267945 [Selaginella moellendorffii]
Length = 389
Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
S F +++DV G+T G G+ G + R L R G P RV
Sbjct: 210 SVFRKDEMIDVIGVTKGHGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSFT 266
Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
AG+ G + T N ++ +
Sbjct: 267 VARAGQNGYHHRTEMNKKIYKI 288
>gi|198435984|ref|XP_002132034.1| PREDICTED: similar to ribosomal protein L3 [Ciona intestinalis]
Length = 411
Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 48/311 (15%), Positives = 80/311 (25%), Gaps = 108/311 (34%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ ++ K GMT V + G ++ VT+L VV
Sbjct: 44 TAFISYKAGMTHVVREVDRPGSKVNKKEVVDAVTILEAPPMIVVGVIGYIETPRGLRTLK 103
Query: 39 ------------RTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRV- 85
R KN Y + ++ K + + KK RV
Sbjct: 104 TLFAEHLSDECKRRFYKNWYACKKKAFTKSCRKWQDEEGKRQIDRDFNQMKKYCKVIRVI 163
Query: 86 ------------------------------QKDDDLLPVGSVFSPSYFTVGQLVDVTGMT 115
L V + F +++D+ G+
Sbjct: 164 AHTQMKLLPITQKKSHIMEIQVNGGTIPEKVDYARDLLEKPVPVSNIFAKDEMIDIIGVN 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
G G G R + L R G P RV + +G+ G + T
Sbjct: 224 KGHGEKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPARVAYSVARSGQKGYHHRTEV 280
Query: 176 NLEVVSV-------------------------------------DDKRGLILVKGCVPGA 198
N ++ + + K +++KGC G
Sbjct: 281 NKKIYRLGAGIHKEGGKLIKNNAATETDITDKSITPMGGFPHYGEVKNDFVMIKGCCIGP 340
Query: 199 KKNSWILVRDS 209
KK + +R S
Sbjct: 341 KKR-VLTLRKS 350
>gi|119580720|gb|EAW60316.1| ribosomal protein L3, isoform CRA_g [Homo sapiens]
Length = 286
Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/243 (14%), Positives = 64/243 (26%), Gaps = 70/243 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ VT++ VV
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFK 103
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ D++G ++ K +
Sbjct: 104 TVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVI 163
Query: 67 GF---------FSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMT 115
++ + +K D V F +++DV G+T
Sbjct: 164 AHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV + AG+ G + T
Sbjct: 224 KGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAFSVARAGQKGYHHRTEI 280
Query: 176 NLE 178
N +
Sbjct: 281 NKK 283
>gi|70909599|emb|CAJ17225.1| ribosomal protein L3e [Mycetophagus quadripustulatus]
Length = 283
Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/146 (20%), Positives = 45/146 (30%), Gaps = 41/146 (28%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
F +++D G+T GKG+ G R + L R G P RV
Sbjct: 85 QVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVSFT 141
Query: 161 KKMAGRMGGNRVTVKNLEVVSV-------------------------------------D 183
AG+ G + T N ++ + +
Sbjct: 142 VARAGQKGYHHRTEMNKKIYRIGAGIHSKDNKVIKNNASTEYDLTEKTITPMGGFPHYGE 201
Query: 184 DKRGLILVKGCVPGAKKNSWILVRDS 209
I++KGC G KK I +R S
Sbjct: 202 VNNDFIMIKGCCMGPKKR-VITLRKS 226
>gi|312283375|dbj|BAJ34553.1| unnamed protein product [Thellungiella halophila]
Length = 389
Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 48/149 (32%), Gaps = 35/149 (23%)
Query: 92 LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR 151
+ S F +++DV G+T GKG+ G + R L R G
Sbjct: 201 FFEKQIPIDSVFQKDEMIDVIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVACIG-A 257
Query: 152 QDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV----------------------------- 182
P RV AG+ G + T N ++ +
Sbjct: 258 WHPARVSYTVARAGQNGYHHRTELNKKIYRLGKVGQETHTAMTEYDRTEKDVTPMGGFAH 317
Query: 183 --DDKRGLILVKGCVPGAKKNSWILVRDS 209
K +++KGC G KK + +R S
Sbjct: 318 YGIVKDDYLMIKGCRMGPKKR-VVTLRQS 345
>gi|209732474|gb|ACI67106.1| 60S ribosomal protein L3 [Salmo salar]
Length = 403
Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
+ FT +++DV G+T G G+ G R + L R G P RV +
Sbjct: 209 NVFTQDEMIDVIGVTKGHGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPSRVAFS 265
Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
AG+ G + T N ++ +
Sbjct: 266 VARAGQKGYHHRTEINKKIYKI 287
>gi|213510850|ref|NP_001135078.1| 60S ribosomal protein L3 [Salmo salar]
gi|209731890|gb|ACI66814.1| 60S ribosomal protein L3 [Salmo salar]
gi|209738508|gb|ACI70123.1| 60S ribosomal protein L3 [Salmo salar]
gi|209738636|gb|ACI70187.1| 60S ribosomal protein L3 [Salmo salar]
gi|223646872|gb|ACN10194.1| 60S ribosomal protein L3 [Salmo salar]
gi|223672733|gb|ACN12548.1| 60S ribosomal protein L3 [Salmo salar]
Length = 403
Score = 54.2 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
+ FT +++DV G+T G G+ G R + L R G P RV +
Sbjct: 209 NVFTQDEMIDVIGVTKGHGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPSRVAFS 265
Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
AG+ G + T N ++ +
Sbjct: 266 VARAGQKGYHHRTEINKKIYKI 287
>gi|209734892|gb|ACI68315.1| 60S ribosomal protein L3 [Salmo salar]
gi|209738572|gb|ACI70155.1| 60S ribosomal protein L3 [Salmo salar]
Length = 403
Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
+ FT +++DV G+T G G+ G R + L R G P RV +
Sbjct: 209 NVFTQDEMIDVIGVTKGHGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPSRVAFS 265
Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
AG+ G + T N ++ +
Sbjct: 266 VARAGQKGYHHRTEINKKIYKI 287
>gi|326929147|ref|XP_003210731.1| PREDICTED: 60S ribosomal protein L3-like [Meleagris gallopavo]
Length = 407
Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 49/153 (32%), Gaps = 41/153 (26%)
Query: 94 VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153
+ S F+ +++DV G+T G G G R + L R G
Sbjct: 202 EKQISVHSVFSQNEMIDVIGVTKGHGMKGVTSRWHSKKLP--RKTHKGLRKVACIG-AWH 258
Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSV------------------------------- 182
P RV + AG+ G + T N ++ +
Sbjct: 259 PARVGYSVARAGQKGYHHRTELNKKIFRIGRGIHVEDGKVVKNNASTNYDVTEKSITPLG 318
Query: 183 ------DDKRGLILVKGCVPGAKKNSWILVRDS 209
+ +++KGCV G KK + +R S
Sbjct: 319 GFPHYGEVNNDFLMLKGCVVGPKKR-VLTLRKS 350
>gi|233957366|gb|ACQ91223.1| ribosomal protein L3 [Penaeus monodon]
Length = 406
Score = 53.8 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/247 (14%), Positives = 63/247 (25%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G +I VT++ V
Sbjct: 44 TAFLGYKAGMTHIVRVADKPGSKINRKEVLEAVTIIETPPMVCVGVVGYIQTPRGLRVLK 103
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ D G ++ + K +
Sbjct: 104 TIWAEHLSEECKRRFYKNWHKSKKKAFTNAAQKWQDSLGKKMIKREIAKMKKYCTHIRII 163
Query: 67 GF---------FSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMT 115
F ++ + +K D + S F +++DV G+T
Sbjct: 164 AHTQVRILRKKFKKAHIMEIQLNGGTVSEKVDWAVNHFEKQIPIDSVFAQDEMIDVIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG G R L R G P RV AG+ G + T +
Sbjct: 224 KGKGMKGVTSRWGTKKLP--RKTHKGLRKVACIG-AWHPTRVQFTVARAGQKGYHHRTER 280
Query: 176 NLEVVSV 182
++ +
Sbjct: 281 TKKIYRI 287
>gi|22203712|gb|AAM94270.1| ribosomal protein L3 [Chlamys farreri]
Length = 396
Score = 53.8 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 47/319 (14%), Positives = 79/319 (24%), Gaps = 108/319 (33%)
Query: 3 SGVVARKLGMTCVY----------NIEGRRIPVTVLHLDNCQVVV--------------- 37
+ + K GM+ + N + VT++ +V
Sbjct: 45 TAFIGYKAGMSHIVRDVDRPGSKSNKKEIVEAVTIIETPPMVIVGLVGYIETPNGLRSFK 104
Query: 38 -----------HRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQ 86
R KN Y + + K + + KK RV
Sbjct: 105 TIFAEHLNEDCRRRFYKNWYNCKKKAFTKYAKKWTDESGKKEIERDFQKMKKYCKVIRVI 164
Query: 87 KDDDLLPVGSVFSPSYFTVGQL-------------------------------VDVTGMT 115
+ ++ Q+ +D+ G+T
Sbjct: 165 AHTQTKLMKKRQKKAHIMEIQVNGGTIAQKVDWAREKMESSVPVGSVFAMDENIDIIGVT 224
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG G R + L R G P RV AG+ G + T
Sbjct: 225 KGKGVKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVQFTVARAGQKGYHHRTEI 281
Query: 176 NLEVVS--------------------VDD-KRGL----------------ILVKGCVPGA 198
N ++ D ++ + I++KGC G
Sbjct: 282 NEKIYRMGEGTHTKDGKLVKNNASTDFDPSEKNITPMGGFPHYGEVNNDFIMIKGCTMGP 341
Query: 199 KKNSWILVRDSFKSAVNCK 217
KK + +R S + K
Sbjct: 342 KKR-ILTLRKSLLPSFKKK 359
>gi|207109616|ref|ZP_03243778.1| 50S ribosomal protein L3 [Helicobacter pylori HPKX_438_CA4C1]
Length = 116
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/126 (21%), Positives = 48/126 (38%), Gaps = 13/126 (10%)
Query: 5 VVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKP 64
+ +K+GM+ + PVT+L + +V +NG V + K +
Sbjct: 3 FLVQKIGMSRTIDAN--STPVTLLKVLQAKVCQL----ENGKALVAYAMHKKHNKAIEGQ 56
Query: 65 MRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAM 124
+ + S + L + ++ D S + V + T G+GF+G M
Sbjct: 57 QKKYQLSKEFNHFATLKASQQKELGD-------LDLSALETLKRVKASFKTKGRGFAGVM 109
Query: 125 KRHNFG 130
KR NF
Sbjct: 110 KRWNFQ 115
>gi|50755665|ref|XP_414843.1| PREDICTED: similar to MGC108366 protein [Gallus gallus]
Length = 407
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 49/153 (32%), Gaps = 41/153 (26%)
Query: 94 VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153
+ S F+ +++DV G+T G G G R + L R G
Sbjct: 202 EKQISVHSVFSQNEMIDVIGVTKGHGMKGVTSRWHSKKLP--RKTHKGLRKVACIG-AWH 258
Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSV------------------------------- 182
P RV + AG+ G + T N ++ +
Sbjct: 259 PARVGYSVARAGQKGYHHRTELNKKIFRIGHGIHVEDGKVVKNNASTNYDVTEKTITPLG 318
Query: 183 ------DDKRGLILVKGCVPGAKKNSWILVRDS 209
+ +++KGCV G KK + +R S
Sbjct: 319 GFPHYGEVNNDFLMLKGCVVGPKKR-VLTLRKS 350
>gi|197632293|gb|ACH70870.1| ribosomal protein L3 [Salmo salar]
Length = 403
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 33/82 (40%), Gaps = 3/82 (3%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
+ FT +++DV G+T G G+ G R + L R G RV +
Sbjct: 209 NVFTQDEMIDVIGVTKGHGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHLSRVAFS 265
Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
AG+ G + T N ++ +
Sbjct: 266 VARAGQKGYHHRTEINKKIYKI 287
>gi|74181618|dbj|BAE30074.1| unnamed protein product [Mus musculus]
Length = 403
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/153 (21%), Positives = 50/153 (32%), Gaps = 41/153 (26%)
Query: 94 VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153
V F +++DV G+T GKG+ G R + L R G
Sbjct: 202 EQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWH 258
Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSV------------------------------- 182
P RV + AG+ G + T N ++ +
Sbjct: 259 PARVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTDYDLSDKSINPLG 318
Query: 183 ------DDKRGLILVKGCVPGAKKNSWILVRDS 209
+ I++KGCV GAKK + +R S
Sbjct: 319 GFVHYGEVTNDFIMLKGCVVGAKKR-VLTLRKS 350
Score = 37.3 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 12/106 (11%), Positives = 24/106 (22%), Gaps = 12/106 (11%)
Query: 3 SGVVARKLGMTCV---YNIEGRRI-------PVTVLHLDNCQVVVHR--TLDKNGYMAVQ 50
+ + K GMT + + G ++ VT++ VV G +
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFK 103
Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGS 96
E + + K +
Sbjct: 104 TVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDDTGKKQLEKD 149
>gi|19115692|ref|NP_594780.1| 60S ribosomal protein L3 [Schizosaccharomyces pombe 972h-]
gi|548771|sp|P36584|RL3B_SCHPO RecName: Full=60S ribosomal protein L3-B
gi|5059|emb|CAA40901.1| ribosomal protein L3 [Schizosaccharomyces pombe]
gi|13810236|emb|CAC37425.1| 60S ribosomal protein L3 [Schizosaccharomyces pombe]
Length = 388
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 43/148 (29%), Gaps = 34/148 (22%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
S F +++DV G+T GKG G R L R G P V
Sbjct: 207 STFEQNEMIDVIGVTRGKGNEGTTARWGTKRLP--RKTHRGLRKVACIG-AWHPANVQWT 263
Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
AG G T N ++ + + ++
Sbjct: 264 VARAGNAGYMHRTQLNSKIYRIGAGDDAKNASTDFDATEKRITPMGGFVRYGVVENDFVM 323
Query: 191 VKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+ G PG K + +R S + + K
Sbjct: 324 LNGATPGPVKR-VLTLRKSLLTHTSRKA 350
>gi|148228673|ref|NP_001080341.1| ribosomal protein L3 [Xenopus laevis]
gi|27769202|gb|AAH42242.1| Rpl3-prov protein [Xenopus laevis]
Length = 403
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/145 (22%), Positives = 49/145 (33%), Gaps = 41/145 (28%)
Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
F +++DV G+T GKG+ G R + L R G P RV +
Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAFSV 266
Query: 162 KMAGRMGGNRVTVKNLEVVSV-------------------------------------DD 184
AG+ G + T N ++ + +
Sbjct: 267 ARAGQKGYHHRTEINKKIYKIGQGYHSKDGKLVKNNASTDYDLSDKSINPLGGFVHYGEV 326
Query: 185 KRGLILVKGCVPGAKKNSWILVRDS 209
K I++KGCV G KK + +R S
Sbjct: 327 KNDFIMLKGCVIGTKKR-VLTLRKS 350
>gi|198285589|gb|ACH85333.1| ribosomal protein L3-like [Salmo salar]
Length = 251
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
+ FT +++DV G+T G G+ G R + L R G P RV +
Sbjct: 57 NVFTQDEMIDVIGVTKGHGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPSRVAFS 113
Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
AG+ G + T N ++ +
Sbjct: 114 VARAGQKGYHHRTEINKKIYKI 135
>gi|19114383|ref|NP_593471.1| 60S ribosomal protein L3 [Schizosaccharomyces pombe 972h-]
gi|730556|sp|P40372|RL3A_SCHPO RecName: Full=60S ribosomal protein L3-A
gi|508856|gb|AAA19655.1| ribosomal protein L3 [Schizosaccharomyces pombe]
gi|2370475|emb|CAB11503.1| 60S ribosomal protein L3 [Schizosaccharomyces pombe]
Length = 388
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/148 (18%), Positives = 43/148 (29%), Gaps = 34/148 (22%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
S F +++DV G+T GKG G R L R G P V
Sbjct: 207 STFEQNEMIDVIGVTRGKGNEGTTARWGTKRLP--RKTHRGLRKVACIG-AWHPANVQWT 263
Query: 161 KKMAGRMGGNRVTVKNLEVVSV------------------------------DDKRGLIL 190
AG G T N ++ + + ++
Sbjct: 264 VARAGNAGYMHRTQLNSKIYRIGAGDDAKNASTDFDATEKRITPMGGFVRYGVVENDFVM 323
Query: 191 VKGCVPGAKKNSWILVRDSFKSAVNCKG 218
+ G PG K + +R S + + K
Sbjct: 324 LNGATPGPVKR-VLTLRKSLLTHTSRKA 350
>gi|324528901|gb|ADY48966.1| 60S ribosomal protein L3 [Ascaris suum]
Length = 222
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/91 (25%), Positives = 32/91 (35%), Gaps = 3/91 (3%)
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
V S F +++D G+T GKGF G R + L R G
Sbjct: 19 EHLEKQVAVDSVFAQDEMIDCIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIG- 75
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
P RV AG+ G + T N ++
Sbjct: 76 AWHPSRVQFTVARAGQKGYHHRTEVNKKIYR 106
>gi|297716820|ref|XP_002834695.1| PREDICTED: 60S ribosomal protein L3-like [Pongo abelii]
Length = 332
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Query: 94 VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153
V F +++DV G+T GKG+ G R + L R G
Sbjct: 209 EQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWH 265
Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV + AG+ G + T N ++ +
Sbjct: 266 PARVAFSVARAGQKGYHHRTEINKKIYKI 294
>gi|294917113|ref|XP_002778404.1| ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
gi|239886795|gb|EER10199.1| ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
Length = 230
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/141 (21%), Positives = 44/141 (31%), Gaps = 36/141 (25%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
S F ++VD+ G+T G G + R L R G P RV
Sbjct: 46 SVFDKDEMVDIIGVTKGHGNTSVTTRWGVTRLA--RKTHRGLRKVACIG-AWHPARVQFQ 102
Query: 161 KKMAGRMGGNRVTVKNLEVVSV------DDKR--------------------------GL 188
AG+MG + N ++ + D
Sbjct: 103 VPRAGQMGYHHRVEINKKIYRIGKALREDPNNAAGSNDLTQKAITPMGGFPHYGEVNEDW 162
Query: 189 ILVKGCVPGAKKNSWILVRDS 209
+++KG V G KK I +R S
Sbjct: 163 VMLKGTVTGPKKR-VITLRKS 182
>gi|291410164|ref|XP_002721356.1| PREDICTED: ribosomal protein L3-like isoform 1 [Oryctolagus
cuniculus]
Length = 400
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Query: 94 VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153
V F +++DV G+T GKG+ R + L H R G
Sbjct: 199 EQQVPVSQVFGQDEMIDVIGVTKGKGYKAVTSRWHTKKLP--HKTHRGLRKVACIG-AWH 255
Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV + AG+ G + T N ++ +
Sbjct: 256 PARVAFSVAWAGQKGYHHRTEINKKIYKI 284
>gi|164605513|dbj|BAF98579.1| ribosomal protein L3 [Solea senegalensis]
Length = 403
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
FT +++DV G+T G G+ G R + L R G P RV +
Sbjct: 210 VFTQDEMIDVIGVTKGHGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAFSV 266
Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
AG+ G + T N ++ +
Sbjct: 267 ARAGQKGYHHRTEINKKIYKI 287
>gi|37654302|gb|AAQ96256.1| LRRGT00043 [Rattus norvegicus]
Length = 867
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
F G+++DV GMT GKG+ G R + R G P V +
Sbjct: 348 QVFGQGEMIDVMGMTKGKGYKGVTSRWHTKKPP--RKTHQGLRKVACIG-AWLPAHVAFS 404
Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
AG+ G + T N ++ +
Sbjct: 405 VARAGQKGYHHQTETNKKIYKI 426
>gi|330039014|ref|XP_003239763.1| 60S ribosomal protein L3 [Cryptomonas paramecium]
gi|327206688|gb|AEA38865.1| 60S ribosomal protein L3 [Cryptomonas paramecium]
Length = 331
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 36/88 (40%), Gaps = 3/88 (3%)
Query: 95 GSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDP 154
V + F G+ VD +T GKGF+G ++R L R G P
Sbjct: 149 NQVTVNTVFKDGEYVDTIAITKGKGFTGVVQRWGVTKLP--RKTRRGARKVACIG-SWHP 205
Query: 155 GRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
RV + AG+ G + T N++V +
Sbjct: 206 SRVSYSVPRAGQKGYHHRTQSNIQVYKI 233
>gi|327287585|ref|XP_003228509.1| PREDICTED: 60S ribosomal protein L3-like [Anolis carolinensis]
Length = 399
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/158 (19%), Positives = 49/158 (31%), Gaps = 41/158 (25%)
Query: 89 DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGST 148
+ S F+ +++DV G+T G G G R + L R
Sbjct: 189 AHEKMEKQISVQSVFSQSEMIDVIGVTKGHGMKGVTSRWHTKKLP--RKTHKGLRKVACI 246
Query: 149 GCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV-------------------------- 182
G P RV + AG+ G + T N ++ +
Sbjct: 247 G-AWHPARVGYSIARAGQKGYHHRTELNKKIYRIGRGVHVEDGKMVRNNGSTNYDTTEKT 305
Query: 183 -----------DDKRGLILVKGCVPGAKKNSWILVRDS 209
+ ++VKGCV G KK + +R S
Sbjct: 306 ITPMGGFPHYGEVNNDFVMVKGCVVGTKKR-VLTLRKS 342
>gi|118120333|ref|XP_001234708.1| PREDICTED: hypothetical protein, partial [Gallus gallus]
Length = 236
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/89 (25%), Positives = 35/89 (39%), Gaps = 3/89 (3%)
Query: 94 VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153
V S F +++DV G+T GKG+ G R + L R G
Sbjct: 35 EQQVPVSSVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWH 91
Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV + AG+ G + T N ++ +
Sbjct: 92 PARVAFSVARAGQKGYHHRTEINKKIYKI 120
>gi|195107417|ref|XP_001998310.1| GI23698 [Drosophila mojavensis]
gi|193914904|gb|EDW13771.1| GI23698 [Drosophila mojavensis]
Length = 415
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 3/82 (3%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
+ F ++VD G+T GKGF G R + L R G P RV
Sbjct: 210 NVFGQDEMVDCVGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVSTT 266
Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
AG+ G + T N ++ +
Sbjct: 267 VARAGQKGYHHRTEINKKIYRI 288
>gi|13517923|gb|AAK29057.1|AF346004_1 L3 ribosomal protein [Lolium perenne]
Length = 220
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 30/148 (20%), Positives = 51/148 (34%), Gaps = 39/148 (26%)
Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR--QDPGRVFK 159
F +++D+ G+T GKG+ G + R L +HR C P RV
Sbjct: 42 VFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP-----RKTHRGLPKVACIGAWHPARVSY 96
Query: 160 NKKMAGRMGGNRVTVKNLEVVSV---------------DDKRGL---------------- 188
AG+ G + T N +V + ++ +
Sbjct: 97 TVARAGQNGYHHRTEMNKKVYKIGKVGQETHDASTEFDRTEKDITPMGGFPHYGVVKGDY 156
Query: 189 ILVKGCVPGAKKNSWILVRDSFKSAVNC 216
+++KGC G KK + +R S +
Sbjct: 157 LMIKGCCVGPKKR-VVTLRQSLLKQTSR 183
>gi|290991133|ref|XP_002678190.1| ribosomal protein L3 [Naegleria gruberi]
gi|284091801|gb|EFC45446.1| ribosomal protein L3 [Naegleria gruberi]
Length = 416
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/145 (17%), Positives = 43/145 (29%), Gaps = 38/145 (26%)
Query: 99 SPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVF 158
S F + +DV ++ GKG G + R L R G P RV
Sbjct: 208 VDSVFAKDEPIDVIAVSKGKGTKGVVSRWGVRRLP--RKTHRGLRKVACIG-AWHPARVS 264
Query: 159 KNKKMAGRMGGNRVTVKNLEVVSV----------------------------------DD 184
+ AG+ G +N ++ +
Sbjct: 265 FSVARAGQKGFFHRVHQNKKIYRIGKSNKTEEGKKSAMTDFDLTEKDVNPMGGFVNYGVV 324
Query: 185 KRGLILVKGCVPGAKKNSWILVRDS 209
+ ++VKG V G + + +R +
Sbjct: 325 ENDWVMVKGNVQGPPRR-VVTLRKT 348
>gi|198138918|gb|ACH81777.1| ribosomal protein L3 [Artemia franciscana]
Length = 194
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/77 (25%), Positives = 29/77 (37%), Gaps = 3/77 (3%)
Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165
+ +DV G T GKG+ G R + L R G P RV AG
Sbjct: 1 DENIDVIGTTKGKGYKGVTSRWHTRKLP--RKTHKGLRKVACIG-AWHPSRVKFTVARAG 57
Query: 166 RMGGNRVTVKNLEVVSV 182
+ G + T N ++ +
Sbjct: 58 QKGYHHRTEMNKKIYRI 74
>gi|132956|sp|P27659|RL3_MOUSE RecName: Full=60S ribosomal protein L3; AltName: Full=J1 protein
gi|52741|emb|CAA68370.1| J1 protein [Mus musculus]
gi|226725|prf||1604248A J1 protein
Length = 403
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 33/89 (37%), Gaps = 3/89 (3%)
Query: 94 VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153
V F +++DV G+T GKG+ G R + L R G
Sbjct: 202 EQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWH 258
Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV AG+ G + T N ++ +
Sbjct: 259 PARVAFTVARAGQKGYHHRTEINKKIYKI 287
Score = 36.9 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 12/106 (11%), Positives = 24/106 (22%), Gaps = 12/106 (11%)
Query: 3 SGVVARKLGMTCV---YNIEGRRI-------PVTVLHLDNCQVVVHR--TLDKNGYMAVQ 50
+ + K GMT + + G ++ VT++ VV G +
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFK 103
Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGS 96
E + + K +
Sbjct: 104 TVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDDTGKKQLEKD 149
>gi|291389862|ref|XP_002711434.1| PREDICTED: ribosomal protein L3-like [Oryctolagus cuniculus]
Length = 403
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Query: 94 VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153
V F +++DV G+T GKG+ G R + L R G
Sbjct: 202 EQQVPVSQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWH 258
Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV + AG+ G + T N ++ +
Sbjct: 259 PARVAFSVARAGQKGYHHRTEINKKIYKI 287
>gi|48597014|ref|NP_001001590.1| 60S ribosomal protein L3 [Danio rerio]
gi|45504885|gb|AAS66967.1| ribosomal protein L3 [Danio rerio]
Length = 403
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 3/83 (3%)
Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159
+ F+ +++DV G+T G G G R + L R G P RV
Sbjct: 208 ANVFSQDEMIDVIGVTKGHGCKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAF 264
Query: 160 NKKMAGRMGGNRVTVKNLEVVSV 182
+ AG+ G + T N ++ +
Sbjct: 265 SVARAGQKGYHHRTEINKKIYKI 287
>gi|56462226|gb|AAV91396.1| ribosomal protein 24 [Lonomia obliqua]
Length = 280
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/149 (14%), Positives = 50/149 (33%), Gaps = 6/149 (4%)
Query: 36 VVHRTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDL---L 92
+ ++++K+ ++ + + + + + ++ +++ +
Sbjct: 8 LGRKSIEKDFKKMIRYCSVIRIIAHTQMKLLKQRQKKAHIMEIQINGGKIEDKVNWAREH 67
Query: 93 PVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152
F +++D G+T GKG+ G R + L R G
Sbjct: 68 LENQFPLTRVFAQDEMIDCIGVTKGKGYKGVTSRWHTKKLP--RKTHKGLRKVACIG-AW 124
Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVS 181
P RV AG+ G + T N ++
Sbjct: 125 HPSRVSFTVARAGQKGYHHRTEMNKKIYR 153
>gi|60688481|gb|AAH91460.1| Ribosomal protein L3 [Danio rerio]
gi|182889202|gb|AAI64784.1| Rpl3 protein [Danio rerio]
Length = 403
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 33/83 (39%), Gaps = 3/83 (3%)
Query: 100 PSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159
+ F+ +++DV G+T G G G R + L R G P RV
Sbjct: 208 ANVFSQDEMIDVIGVTKGHGCKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAF 264
Query: 160 NKKMAGRMGGNRVTVKNLEVVSV 182
+ AG+ G + T N ++ +
Sbjct: 265 SVARAGQKGYHHRTEINKKIYKI 287
>gi|291402716|ref|XP_002717715.1| PREDICTED: ribosomal protein L3-like [Oryctolagus cuniculus]
Length = 428
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 31/153 (20%), Positives = 48/153 (31%), Gaps = 41/153 (26%)
Query: 94 VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153
V F +++DV G+T GKG+ G R + L R G
Sbjct: 228 EQQVPVSQVFGQDKMIDVIGVTKGKGYKGVTSRWHTKKLL--RKTHRGLRKVACIG-AWH 284
Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSV------------------------------- 182
P V + AG+ G + T N ++ +
Sbjct: 285 PAHVAFSVARAGQKGYHHRTEINKKIYKIGQGYLIKDGKLIKNNASTNYDLSDKSINPLG 344
Query: 183 ------DDKRGLILVKGCVPGAKKNSWILVRDS 209
+ I++KGCV G KK + +R S
Sbjct: 345 GFVHYREVTNDFIMLKGCVVGTKKR-VLTLRKS 376
>gi|195055484|ref|XP_001994649.1| GH14923 [Drosophila grimshawi]
gi|193892412|gb|EDV91278.1| GH14923 [Drosophila grimshawi]
Length = 417
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 31/81 (38%), Gaps = 3/81 (3%)
Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
F ++VD G+T GKGF G R + L R G P RV
Sbjct: 210 VFGQDEMVDCVGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVSTTV 266
Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
AG+ G + T N ++ +
Sbjct: 267 ARAGQKGYHHRTEINKKIYRI 287
>gi|114660361|ref|XP_001160309.1| PREDICTED: similar to ribosomal protein L3-like [Pan troglodytes]
Length = 407
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 35/247 (14%), Positives = 60/247 (24%), Gaps = 70/247 (28%)
Query: 3 SGVVARKLGMTCV----------YNIEGRRIPVTVLHLDNCQVVVH-------------R 39
+ + K GMT + VT++ VV +
Sbjct: 44 TAFLGYKAGMTHTLREVHRPGLKISKREEVEAVTIVETPPLMVVGVVGYVATPRGLRSFK 103
Query: 40 TL---------------------------------DKNGYMAVQVGAGEAKVKNVSKPMR 66
T+ D +G +Q K +
Sbjct: 104 TIFAEHLSDECRRRFYKDWHKSKKKAFTKACKRWRDTDGKKQLQKDFAAMKKYCKVIRVI 163
Query: 67 GF-------FSSVNVSPKKKLFEFRVQKD----DDLLPVGSVFSPSYFTVGQLVDVTGMT 115
F + + V S F+ +++DV +T
Sbjct: 164 VHTQMKLLPFRQKKAHIMEIQLNGGTVAEKVAWAQARLEKQVPVHSVFSQSEVIDVIAVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
G+G G R + L R G P RV + AG+ G + T
Sbjct: 224 KGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPARVGCSIARAGQKGYHHRTEL 280
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 281 NKKIFRI 287
>gi|226480220|emb|CAX78774.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 327
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
+ + F+ +++DV G+T GKGF G R + L R G
Sbjct: 107 QHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIG- 163
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV ++ AG+ G T N ++ +
Sbjct: 164 AWHPARVARSVARAGQKGYFHRTELNKKIYRI 195
>gi|74185237|dbj|BAE30097.1| unnamed protein product [Mus musculus]
Length = 403
Score = 52.7 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 33/89 (37%), Gaps = 3/89 (3%)
Query: 94 VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153
V F +++DV G+T KG+ G R + L R G
Sbjct: 202 EQQVPVNQVFGQDEMIDVIGVTKDKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWH 258
Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV + AG+ G + T N ++ +
Sbjct: 259 PARVAFSVARAGQKGYHHRTEINKKIYKI 287
Score = 37.3 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 12/106 (11%), Positives = 24/106 (22%), Gaps = 12/106 (11%)
Query: 3 SGVVARKLGMTCV---YNIEGRRI-------PVTVLHLDNCQVVVHR--TLDKNGYMAVQ 50
+ + K GMT + + G ++ VT++ VV G +
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFK 103
Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGS 96
E + + K +
Sbjct: 104 TVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDDTGKKQLEKD 149
>gi|226475922|emb|CAX72051.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 328
Score = 52.7 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
+ + F+ +++DV G+T GKGF G R + L R G
Sbjct: 108 QHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIG- 164
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV ++ AG+ G T N ++ +
Sbjct: 165 AWHPARVARSVARAGQKGYFHRTELNKKIYRI 196
>gi|226475912|emb|CAX72046.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 341
Score = 52.7 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
+ + F+ +++DV G+T GKGF G R + L R G
Sbjct: 121 QHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIG- 177
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV ++ AG+ G T N ++ +
Sbjct: 178 AWHPARVARSVTRAGQKGYFHRTELNKKIYRI 209
>gi|187607061|ref|NP_001120075.1| ribosomal protein L3 [Xenopus (Silurana) tropicalis]
gi|165970448|gb|AAI58280.1| LOC100145083 protein [Xenopus (Silurana) tropicalis]
gi|165971389|gb|AAI58514.1| LOC100145083 protein [Xenopus (Silurana) tropicalis]
Length = 403
Score = 52.7 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/145 (21%), Positives = 49/145 (33%), Gaps = 41/145 (28%)
Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
F +++DV G+T GKG+ G R + L R G P RV +
Sbjct: 210 VFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAFSV 266
Query: 162 KMAGRMGGNRVTVKNLEVVSV-------------------------------------DD 184
AG+ G + T N ++ + +
Sbjct: 267 ARAGQKGYHHRTEINKKIYKIGQGYHSKDGKLVKNNASTDYDLSDKSINPLGGFVHYGEV 326
Query: 185 KRGLILVKGCVPGAKKNSWILVRDS 209
K +++KGCV G KK + +R S
Sbjct: 327 KNDFVMLKGCVIGTKKR-VLTLRKS 350
>gi|226475914|emb|CAX72047.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 419
Score = 52.7 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
+ + F+ +++DV G+T GKGF G R + L R G
Sbjct: 199 QHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIG- 255
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV ++ AG+ G T N ++ +
Sbjct: 256 AWHPARVARSVARAGQKGYFHRTELNKKIYRI 287
Score = 35.4 bits (80), Expect = 5.1, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 32/93 (34%), Gaps = 18/93 (19%)
Query: 3 SGVVARKLGMTCV---YNIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
+ + K GMT + + G ++ PVT++ +V GY G
Sbjct: 44 TAFMGYKAGMTHIVREVDRPGSKVHKREVVEPVTIMECPPMVIVGMV-----GYAPTARG 98
Query: 53 ---AGEAKVKNVSKPMRGFFSSVNVSPKKKLFE 82
+++++ R F KKK F
Sbjct: 99 LRTFKTVWAEHLTEECRRRFYKDWCKSKKKAFT 131
>gi|226480246|emb|CAX78787.1| ribosomal protein L3 [Schistosoma japonicum]
gi|226480248|emb|CAX78788.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 328
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
+ + F+ +++DV G+T GKGF G R + L R G
Sbjct: 108 QHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIG- 164
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV ++ AG+ G T N ++ +
Sbjct: 165 AWHPARVARSVARAGQKGYFHRTELNKKIYRI 196
>gi|226480222|emb|CAX78775.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 419
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
+ + F+ +++DV G+T GKGF G R + L R G
Sbjct: 199 QHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIG- 255
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV ++ AG+ G T N ++ +
Sbjct: 256 AWHPARVARSVARAGQKGYFHRTELNKKIYRI 287
Score = 35.4 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 17/90 (18%), Positives = 31/90 (34%), Gaps = 18/90 (20%)
Query: 3 SGVVARKLGMTCV---YNIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
+ + K GMT + + G ++ PVT++ +V GY G
Sbjct: 44 TAFMGYKAGMTHIVREVDRPGSKVHKREVVEPVTIMECPPMVIVGMV-----GYAPTAKG 98
Query: 53 ---AGEAKVKNVSKPMRGFFSSVNVSPKKK 79
+++++ R F KKK
Sbjct: 99 LRTFKTVWAEHLTEECRRRFYKDWCKSKKK 128
>gi|226475916|emb|CAX72048.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 419
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
+ + F+ +++DV G+T GKGF G R + L R G
Sbjct: 199 QHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIG- 255
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV ++ AG+ G T N ++ +
Sbjct: 256 AWHPARVARSVARAGQKGYFHRTELNKKIYRI 287
Score = 35.4 bits (80), Expect = 5.1, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 32/93 (34%), Gaps = 18/93 (19%)
Query: 3 SGVVARKLGMTCV---YNIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
+ + K GMT + + G ++ PVT++ +V GY G
Sbjct: 44 TAFMGYKAGMTHIVREVDRPGSKVHKREVVEPVTIMECPPMVIVGMV-----GYAPTAKG 98
Query: 53 ---AGEAKVKNVSKPMRGFFSSVNVSPKKKLFE 82
+++++ R F KKK F
Sbjct: 99 LRTFKTVWAEHLTEECRRRFYKDWCKSKKKAFT 131
>gi|29841161|gb|AAP06174.1| SJCHGC06297 protein [Schistosoma japonicum]
gi|226475918|emb|CAX72049.1| ribosomal protein L3 [Schistosoma japonicum]
gi|226475924|emb|CAX72052.1| ribosomal protein L3 [Schistosoma japonicum]
gi|226475926|emb|CAX72053.1| ribosomal protein L3 [Schistosoma japonicum]
gi|226475928|emb|CAX72054.1| ribosomal protein L3 [Schistosoma japonicum]
gi|226480226|emb|CAX78777.1| ribosomal protein L3 [Schistosoma japonicum]
gi|226480228|emb|CAX78778.1| ribosomal protein L3 [Schistosoma japonicum]
gi|226480236|emb|CAX78782.1| ribosomal protein L3 [Schistosoma japonicum]
gi|226480238|emb|CAX78783.1| ribosomal protein L3 [Schistosoma japonicum]
gi|226480240|emb|CAX78784.1| ribosomal protein L3 [Schistosoma japonicum]
gi|226480242|emb|CAX78785.1| ribosomal protein L3 [Schistosoma japonicum]
gi|226480244|emb|CAX78786.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 419
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
+ + F+ +++DV G+T GKGF G R + L R G
Sbjct: 199 QHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIG- 255
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV ++ AG+ G T N ++ +
Sbjct: 256 AWHPARVARSVARAGQKGYFHRTELNKKIYRI 287
Score = 35.7 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 32/93 (34%), Gaps = 18/93 (19%)
Query: 3 SGVVARKLGMTCV---YNIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
+ + K GMT + + G ++ PVT++ +V GY G
Sbjct: 44 TAFMGYKAGMTHIVREVDRPGSKVHKREVVEPVTIMECPPMVIVGMV-----GYAPTAKG 98
Query: 53 ---AGEAKVKNVSKPMRGFFSSVNVSPKKKLFE 82
+++++ R F KKK F
Sbjct: 99 LRTFKTVWAEHLTEECRRRFYKDWCKSKKKAFT 131
>gi|256000845|gb|ACU51763.1| RE52161p [Drosophila melanogaster]
Length = 316
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
+ F +++D G+T GKGF G R + L R G P RV
Sbjct: 109 NVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVSTT 165
Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
AG+ G + T N ++ +
Sbjct: 166 VARAGQKGYHHRTEINKKIYRI 187
>gi|94404874|ref|XP_982298.1| PREDICTED: 60S ribosomal protein L3-like [Mus musculus]
Length = 385
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Query: 94 VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153
V F +++DV G+T GKG+ G R + L R G
Sbjct: 184 EQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWH 240
Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV + AG+ G + T N ++ +
Sbjct: 241 PARVAFSVARAGQKGYHHRTEINKKIYKI 269
>gi|226480230|emb|CAX78779.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 329
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
+ + F+ +++DV G+T GKGF G R + L R G
Sbjct: 109 QHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIG- 165
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV ++ AG+ G T N ++ +
Sbjct: 166 AWHPARVARSVARAGQKGYFHRTELNKKIYRI 197
>gi|48257062|gb|AAH04323.2| RPL3 protein [Homo sapiens]
Length = 292
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Query: 94 VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153
V F +++DV G+T GKG+ G R + L R G
Sbjct: 91 EQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWH 147
Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV + AG+ G + T N ++ +
Sbjct: 148 PARVAFSVARAGQKGYHHRTEINKKIYKI 176
>gi|74191638|dbj|BAE30390.1| unnamed protein product [Mus musculus]
gi|74198856|dbj|BAE30653.1| unnamed protein product [Mus musculus]
Length = 403
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Query: 94 VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153
V F +++DV G+T GKG+ G R + L R G
Sbjct: 202 EQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWH 258
Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV + AG+ G + T N ++ +
Sbjct: 259 PARVAFSVARAGQKGYHHRTEINKKIYKI 287
Score = 36.9 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 12/106 (11%), Positives = 24/106 (22%), Gaps = 12/106 (11%)
Query: 3 SGVVARKLGMTCV---YNIEGRRI-------PVTVLHLDNCQVVVHR--TLDKNGYMAVQ 50
+ + K GMT + + G ++ VT++ VV G +
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFK 103
Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGS 96
E + + K +
Sbjct: 104 TVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDDTGKKQLEKD 149
>gi|38454246|ref|NP_942048.1| 60S ribosomal protein L3 [Rattus norvegicus]
gi|132958|sp|P21531|RL3_RAT RecName: Full=60S ribosomal protein L3; AltName: Full=L4
gi|57698|emb|CAA44095.1| ribosomal protein L3 [Rattus rattus]
gi|37231753|gb|AAH58494.1| Ribosomal protein L3 [Rattus norvegicus]
gi|149065896|gb|EDM15769.1| ribosomal protein L3, isoform CRA_b [Rattus norvegicus]
Length = 403
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Query: 94 VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153
V F +++DV G+T GKG+ G R + L R G
Sbjct: 202 EQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWH 258
Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV + AG+ G + T N ++ +
Sbjct: 259 PARVAFSVARAGQKGYHHRTEINKKIYKI 287
Score = 37.3 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 12/106 (11%), Positives = 24/106 (22%), Gaps = 12/106 (11%)
Query: 3 SGVVARKLGMTCV---YNIEGRRI-------PVTVLHLDNCQVVVHR--TLDKNGYMAVQ 50
+ + K GMT + + G ++ VT++ VV G +
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFK 103
Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGS 96
E + + K +
Sbjct: 104 TVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDDTGKKQLEKD 149
>gi|255308899|ref|NP_038790.2| 60S ribosomal protein L3 [Mus musculus]
gi|16307136|gb|AAH09655.1| Ribosomal protein L3 [Mus musculus]
gi|26354122|dbj|BAC40691.1| unnamed protein product [Mus musculus]
gi|53237049|gb|AAH83134.1| Ribosomal protein L3 [Mus musculus]
gi|62825867|gb|AAH94059.1| Ribosomal protein L3 [Mus musculus]
gi|74138821|dbj|BAE27217.1| unnamed protein product [Mus musculus]
gi|74139413|dbj|BAE40848.1| unnamed protein product [Mus musculus]
gi|74141867|dbj|BAE41003.1| unnamed protein product [Mus musculus]
gi|74142025|dbj|BAE41075.1| unnamed protein product [Mus musculus]
gi|74146286|dbj|BAE28917.1| unnamed protein product [Mus musculus]
gi|74151280|dbj|BAE38773.1| unnamed protein product [Mus musculus]
gi|74184852|dbj|BAE39049.1| unnamed protein product [Mus musculus]
gi|74190533|dbj|BAE25922.1| unnamed protein product [Mus musculus]
gi|74195956|dbj|BAE30536.1| unnamed protein product [Mus musculus]
gi|74198689|dbj|BAE39818.1| unnamed protein product [Mus musculus]
gi|74201222|dbj|BAE26078.1| unnamed protein product [Mus musculus]
gi|74204394|dbj|BAE39950.1| unnamed protein product [Mus musculus]
gi|74207543|dbj|BAE40022.1| unnamed protein product [Mus musculus]
gi|74207577|dbj|BAE40037.1| unnamed protein product [Mus musculus]
gi|74207702|dbj|BAE40095.1| unnamed protein product [Mus musculus]
gi|74207706|dbj|BAE40097.1| unnamed protein product [Mus musculus]
gi|74212023|dbj|BAE40178.1| unnamed protein product [Mus musculus]
gi|74220011|dbj|BAE40585.1| unnamed protein product [Mus musculus]
gi|74221090|dbj|BAE42051.1| unnamed protein product [Mus musculus]
gi|148672669|gb|EDL04616.1| mCG11520, isoform CRA_b [Mus musculus]
gi|187956900|gb|AAI58040.1| Ribosomal protein L3 [Mus musculus]
Length = 403
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Query: 94 VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153
V F +++DV G+T GKG+ G R + L R G
Sbjct: 202 EQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWH 258
Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV + AG+ G + T N ++ +
Sbjct: 259 PARVAFSVARAGQKGYHHRTEINKKIYKI 287
Score = 36.9 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 12/106 (11%), Positives = 24/106 (22%), Gaps = 12/106 (11%)
Query: 3 SGVVARKLGMTCV---YNIEGRRI-------PVTVLHLDNCQVVVHR--TLDKNGYMAVQ 50
+ + K GMT + + G ++ VT++ VV G +
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFK 103
Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGS 96
E + + K +
Sbjct: 104 TVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDDTGKKQLEKD 149
>gi|73969057|ref|XP_859775.1| PREDICTED: similar to ribosomal protein L3 isoform 3 [Canis
familiaris]
gi|73969059|ref|XP_859808.1| PREDICTED: similar to ribosomal protein L3 isoform 4 [Canis
familiaris]
gi|73969065|ref|XP_859912.1| PREDICTED: similar to ribosomal protein L3 isoform 7 [Canis
familiaris]
Length = 251
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Query: 94 VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153
V F +++DV G+T GKG+ G R + L R G
Sbjct: 50 EQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWH 106
Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV + AG+ G + T N ++ +
Sbjct: 107 PARVAFSVARAGQKGYHHRTEINKKIYKI 135
>gi|71296875|gb|AAH36582.1| RPL3 protein [Homo sapiens]
gi|119580715|gb|EAW60311.1| ribosomal protein L3, isoform CRA_b [Homo sapiens]
gi|119580721|gb|EAW60317.1| ribosomal protein L3, isoform CRA_b [Homo sapiens]
Length = 251
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Query: 94 VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153
V F +++DV G+T GKG+ G R + L R G
Sbjct: 50 EQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWH 106
Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV + AG+ G + T N ++ +
Sbjct: 107 PARVAFSVARAGQKGYHHRTEINKKIYKI 135
>gi|74186276|dbj|BAE42921.1| unnamed protein product [Mus musculus]
Length = 403
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Query: 94 VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153
V F +++DV G+T GKG+ G R + L R G
Sbjct: 202 EQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWH 258
Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV + AG+ G + T N ++ +
Sbjct: 259 PARVAFSVARAGQKGYHHRTEINKKIYKI 287
>gi|73969067|ref|XP_859944.1| PREDICTED: similar to 60S ribosomal protein L3 (L4) isoform 8
[Canis familiaris]
Length = 320
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Query: 94 VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153
V F +++DV G+T GKG+ G R + L R G
Sbjct: 119 EQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWH 175
Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV + AG+ G + T N ++ +
Sbjct: 176 PARVAFSVARAGQKGYHHRTEINKKIYKI 204
>gi|148697895|gb|EDL29842.1| mCG129893 [Mus musculus]
Length = 358
Score = 51.9 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Query: 94 VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153
V F +++DV G+T GKG+ G R + L R G
Sbjct: 157 EQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWH 213
Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV + AG+ G + T N ++ +
Sbjct: 214 PARVAFSVARAGQKGYHHRTEINKKIYKI 242
>gi|7159730|emb|CAB76201.1| ribosomal protein L3 [Homo sapiens]
Length = 343
Score = 51.9 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Query: 94 VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153
V F +++DV G+T GKG+ G R + L R G
Sbjct: 147 EQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWH 203
Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV + AG+ G + T N ++ +
Sbjct: 204 PARVAFSVARAGQKGYHHRTEINKKIYKI 232
>gi|73973634|ref|XP_868301.1| PREDICTED: similar to 60S ribosomal protein L3 (L4) isoform 7
[Canis familiaris]
Length = 305
Score = 51.9 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Query: 94 VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153
V F +++DV G+T GKG+ G R + L R G
Sbjct: 104 EQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWH 160
Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV + AG+ G + T N ++ +
Sbjct: 161 PARVAFSMARAGQKGYHHRTEINKKIYKI 189
>gi|306922439|gb|ADN07433.1| RE73632p [Drosophila melanogaster]
Length = 208
Score = 51.9 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 32/82 (39%), Gaps = 3/82 (3%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
+ F +++D G+T GKGF G R + L R G P RV
Sbjct: 109 NVFGQDEMIDCVGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVSTT 165
Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
AG+ G + T N ++ +
Sbjct: 166 VARAGQKGYHHRTEINKKIYRI 187
>gi|119580718|gb|EAW60314.1| ribosomal protein L3, isoform CRA_e [Homo sapiens]
gi|119580723|gb|EAW60319.1| ribosomal protein L3, isoform CRA_e [Homo sapiens]
Length = 351
Score = 51.9 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Query: 94 VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153
V F +++DV G+T GKG+ G R + L R G
Sbjct: 150 EQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWH 206
Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV + AG+ G + T N ++ +
Sbjct: 207 PARVAFSVARAGQKGYHHRTEINKKIYKI 235
>gi|239789793|dbj|BAH71497.1| ACYPI009439 [Acyrthosiphon pisum]
Length = 193
Score = 51.9 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 29/75 (38%), Gaps = 3/75 (4%)
Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167
++D G+T G+G+ G R + L R G P RV AG+
Sbjct: 1 MIDCIGVTKGRGYKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVQFTVARAGQK 57
Query: 168 GGNRVTVKNLEVVSV 182
G + T N ++ +
Sbjct: 58 GYHHRTEINKKIYRI 72
>gi|327272509|ref|XP_003221027.1| PREDICTED: 60S ribosomal protein L3-like [Anolis carolinensis]
Length = 403
Score = 51.9 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 35/89 (39%), Gaps = 3/89 (3%)
Query: 94 VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153
V + F +++DV G+T GKG+ G R + L R G
Sbjct: 202 EQQVPVSTVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWH 258
Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV + AG+ G + T N ++ +
Sbjct: 259 PARVAFSVARAGQKGYHHRTEINKKIYKI 287
>gi|75107053|sp|P82191|RK3_SPIOL RecName: Full=50S ribosomal protein L3, chloroplastic
Length = 45
Score = 51.9 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Query: 3 SGVVARKLGMTCVYNIEGRRIPVTVLHL-DNCQVVVHRTL 41
GV+ KLGM + +G +PVTV+ + V +T
Sbjct: 6 IGVMGTKLGMMSFFEEDGTVVPVTVIGFKEGNIVTQVKTE 45
>gi|148235098|ref|NP_001091345.1| hypothetical protein LOC100037184 [Xenopus laevis]
gi|125858902|gb|AAI29593.1| LOC100037184 protein [Xenopus laevis]
Length = 405
Score = 51.9 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/91 (26%), Positives = 33/91 (36%), Gaps = 3/91 (3%)
Query: 92 LPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR 151
L V S F + VD+ +T GKGF G R L+ R G
Sbjct: 205 LFEQQVPVKSVFGQNENVDIIAVTKGKGFEGVTFRWGVKKLQ--RKTHRGLRKVACIG-A 261
Query: 152 QDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV AG+ G + T N ++ +
Sbjct: 262 WHPARVGFTVPRAGQNGYHHRTELNKKIYRI 292
>gi|226480232|emb|CAX78780.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 252
Score = 51.9 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
+ + F+ +++DV G+T GKGF G R + L R G
Sbjct: 32 QHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIG- 88
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV ++ AG+ G T N ++ +
Sbjct: 89 AWHPARVARSVARAGQKGYFHRTELNKKIYRI 120
>gi|294919384|ref|XP_002778527.1| ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
gi|239887018|gb|EER10322.1| ribosomal protein L3, putative [Perkinsus marinus ATCC 50983]
Length = 178
Score = 51.5 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 28/134 (20%), Positives = 41/134 (30%), Gaps = 36/134 (26%)
Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167
+VD+ G+T G G + R L R G P RV AG+M
Sbjct: 1 MVDIIGVTKGHGNTSVTTRWGVTRLA--RKTHRGLRKVACIG-AWHPARVQFQVPRAGQM 57
Query: 168 GGNRVTVKNLEVVSV------DDKR--------------------------GLILVKGCV 195
G + N ++ + D +++KG V
Sbjct: 58 GYHHRVEINKKIYRIGKALREDPNNAAGSNDLTQKAITPMGGFPHYGEVNEDWVMLKGTV 117
Query: 196 PGAKKNSWILVRDS 209
G KK I +R S
Sbjct: 118 TGPKKR-VITLRKS 130
>gi|256079531|ref|XP_002576040.1| 60S ribosomal protein L3 [Schistosoma mansoni]
gi|238661298|emb|CAZ32275.1| 60S ribosomal protein L3, putative [Schistosoma mansoni]
Length = 419
Score = 51.5 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 22/92 (23%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
+ + F+ +++DV G+T GKGF G R + L R G
Sbjct: 199 QHFEKQISVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIG- 255
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV ++ AG+ G T N ++ +
Sbjct: 256 AWHPARVARSVARAGQKGYFHRTELNKKIYKI 287
>gi|301769703|ref|XP_002920231.1| PREDICTED: 60S ribosomal protein L3-like [Ailuropoda melanoleuca]
Length = 444
Score = 51.5 bits (122), Expect = 8e-05, Method: Composition-based stats.
Identities = 30/153 (19%), Positives = 49/153 (32%), Gaps = 41/153 (26%)
Query: 94 VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153
V S F+ +++DV +T G+G G R + L R G
Sbjct: 239 EKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWH 295
Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSV------------------------------- 182
P RV + AG+ G + T N ++ +
Sbjct: 296 PARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHKEDGKVVKNNASTSYDVTDKSITPLG 355
Query: 183 ------DDKRGLILVKGCVPGAKKNSWILVRDS 209
+ +++KGC+ G KK I +R S
Sbjct: 356 GFPHYGEVNNDFVMLKGCIAGTKKR-VITLRKS 387
>gi|126335506|ref|XP_001366065.1| PREDICTED: similar to Ribosomal protein L3-like [Monodelphis
domestica]
Length = 505
Score = 51.5 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 34/219 (15%), Positives = 60/219 (27%), Gaps = 52/219 (23%)
Query: 39 RTLDKNGYMAVQVGAGEAKVKNVSKPMRGF-------FSSVNVSPKKKLFEFRVQKDDDL 91
+ D +G +Q K + F + +
Sbjct: 233 KWRDDDGKKRLQKDFASMKKYCKVIRVIVHTQMKLLPFRQKKAHIMEIQLNGGTIAEKVE 292
Query: 92 LPV----GSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGS 147
V + F+ +++DV +T G+G G R + L R
Sbjct: 293 WARARLEKQVSVHTVFSQSEVIDVIAVTKGRGMKGVTSRWHAKKLP--RKTHKGLRKVAC 350
Query: 148 TGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------------------------- 182
G P RV + AG+ G + T N ++ +
Sbjct: 351 IG-AWHPARVGYSIARAGQKGYHHRTELNKKIYRIGHGIHVKDGKVVKNNASTSYDVTDK 409
Query: 183 ------------DDKRGLILVKGCVPGAKKNSWILVRDS 209
+ +++KGC+ G KK I +R S
Sbjct: 410 SITPLGGFPHYGEVNNDFVMLKGCIAGTKKR-VITLRKS 447
>gi|73959559|ref|XP_547185.2| PREDICTED: similar to 60S ribosomal protein L3-like [Canis
familiaris]
Length = 494
Score = 51.5 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 35/220 (15%), Positives = 60/220 (27%), Gaps = 52/220 (23%)
Query: 38 HRTLDKNGYMAVQVGAGEAKVKNVSKPMRGF-------FSSVNVSPKKKLFEFRVQKD-- 88
+ D +G +Q K + F + +
Sbjct: 222 KKWRDADGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHIMEIQLNGGTVAEKV 281
Query: 89 --DDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHG 146
V S F+ +++DV +T G+G G R + L R
Sbjct: 282 AWAQARLEKQVPVHSVFSQNEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVA 339
Query: 147 STGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------------------------ 182
G P RV + AG+ G + T N ++ +
Sbjct: 340 CIG-AWHPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHMEEGKVVKNNAATSYDVTD 398
Query: 183 -------------DDKRGLILVKGCVPGAKKNSWILVRDS 209
+ +++KGC+ G KK I +R S
Sbjct: 399 KSITPLGGFPHYGEVNNDFVMLKGCIAGTKKR-VITLRKS 437
>gi|255653009|ref|NP_001157417.1| ribosomal protein L3-like isoform 1 [Mus musculus]
Length = 407
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/154 (20%), Positives = 49/154 (31%), Gaps = 41/154 (26%)
Query: 93 PVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152
V S F+ +++DV +T G+G G R + L R G
Sbjct: 201 MEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIG-AW 257
Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------------------------------ 182
P RV + AG+ G + T N ++ +
Sbjct: 258 HPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHMEDGKMVRNNASTSYDVTDKSITPL 317
Query: 183 -------DDKRGLILVKGCVPGAKKNSWILVRDS 209
+ I++KGC+ G KK I +R S
Sbjct: 318 GGFPHYGEVNNDFIMLKGCIAGTKKR-VITLRKS 350
>gi|225718854|gb|ACO15273.1| 60S ribosomal protein L3 [Caligus clemensi]
Length = 410
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 3/82 (3%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
S F+ +++D G+T GKGF G R + L R G P R+
Sbjct: 209 SVFSKDEMIDTIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRIQYT 265
Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
AG+ G + T N ++ +
Sbjct: 266 VARAGQKGYHHRTEINKKIYDI 287
>gi|109127211|ref|XP_001082003.1| PREDICTED: 60S ribosomal protein L3-like [Macaca mulatta]
Length = 407
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 44/152 (28%), Gaps = 14/152 (9%)
Query: 42 DKNGYMAVQVGAGEAKVKNVSKPMRGF-------FSSVNVSPKKKLFEFRVQKD----DD 90
D +G +Q K + F + D
Sbjct: 139 DTDGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHIMEIQLNVGTVADKVAWAQ 198
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
V S F+ +++DV +T G+G G R + L R G
Sbjct: 199 ARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIG- 255
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV + AG+ G + T N ++ +
Sbjct: 256 AWHPARVGCSIARAGQKGYHHRTELNKKIYRI 287
>gi|188529359|gb|ACD62425.1| ribosomal protein L3 [Drosophila silvestris]
Length = 207
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 3/84 (3%)
Query: 99 SPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVF 158
+ F ++VD G+T GKGF G R + L R G P RV
Sbjct: 39 VCNVFGQDEMVDCVGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVXCIG-AWHPSRVS 95
Query: 159 KNKKMAGRMGGNRVTVKNLEVVSV 182
AG+ G + T N ++ +
Sbjct: 96 TTVARAGQKGYHHRTEINKKIYRI 119
>gi|3642669|gb|AAC36524.1| ribosomal protein L3 [Mus musculus]
Length = 117
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/89 (24%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Query: 94 VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153
V F +++DV G+T GKG+ G R + L R G
Sbjct: 20 EQQVPVNQVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWH 76
Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV + AG+ G + T N ++ +
Sbjct: 77 PARVAFSVARAGQKGYHHRTEINKKIYKI 105
>gi|291415728|ref|XP_002724100.1| PREDICTED: ribosomal protein L3-like [Oryctolagus cuniculus]
Length = 407
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Query: 94 VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153
V S F+ +++DV +T G+G G R + L R G
Sbjct: 202 EKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWH 258
Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV + AG+ G + T N ++ +
Sbjct: 259 PARVGCSIARAGQKGYHHRTELNKKIYRI 287
>gi|14336774|gb|AAK61301.1|AE006640_5 60S ribosomal protein L3 like [Homo sapiens]
Length = 406
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/152 (17%), Positives = 44/152 (28%), Gaps = 14/152 (9%)
Query: 42 DKNGYMAVQVGAGEAKVKNVSKPMRGF-------FSSVNVSPKKKLFEFRVQKD----DD 90
D +G +Q K + F + +
Sbjct: 138 DTDGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHIMEIQLNGGTVAEKVAWAQ 197
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
V S F+ +++DV +T G+G G R + L R G
Sbjct: 198 ARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIG- 254
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV + AG+ G + T N ++ +
Sbjct: 255 AWHPARVGCSIARAGQKGYHHRTELNKKIFRI 286
>gi|4826988|ref|NP_005052.1| 60S ribosomal protein L3-like [Homo sapiens]
gi|2500230|sp|Q92901|RL3L_HUMAN RecName: Full=60S ribosomal protein L3-like
gi|1638884|gb|AAC50777.1| ribosomal protein L3-like [Homo sapiens]
gi|30046542|gb|AAH50413.1| Ribosomal protein L3-like [Homo sapiens]
gi|119606005|gb|EAW85599.1| ribosomal protein L3-like [Homo sapiens]
Length = 407
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/152 (17%), Positives = 44/152 (28%), Gaps = 14/152 (9%)
Query: 42 DKNGYMAVQVGAGEAKVKNVSKPMRGF-------FSSVNVSPKKKLFEFRVQKD----DD 90
D +G +Q K + F + +
Sbjct: 139 DTDGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHIMEIQLNGGTVAEKVAWAQ 198
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
V S F+ +++DV +T G+G G R + L R G
Sbjct: 199 ARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIG- 255
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV + AG+ G + T N ++ +
Sbjct: 256 AWHPARVGCSIARAGQKGYHHRTELNKKIFRI 287
>gi|189053728|dbj|BAG35980.1| unnamed protein product [Homo sapiens]
Length = 407
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/152 (17%), Positives = 44/152 (28%), Gaps = 14/152 (9%)
Query: 42 DKNGYMAVQVGAGEAKVKNVSKPMRGF-------FSSVNVSPKKKLFEFRVQKD----DD 90
D +G +Q K + F + +
Sbjct: 139 DTDGKKQLQKDFAAMKKYCKVIRVIVHTQMKLLPFRQKKAHIMEIQLNGGTVAEKVAWAQ 198
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
V S F+ +++DV +T G+G G R + L R G
Sbjct: 199 ARLEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIG- 255
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV + AG+ G + T N ++ +
Sbjct: 256 AWHPARVGCSIARAGQKGYHHRTELNKKIFRI 287
>gi|281341592|gb|EFB17176.1| hypothetical protein PANDA_008982 [Ailuropoda melanoleuca]
Length = 407
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Query: 94 VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153
V S F+ +++DV +T G+G G R + L R G
Sbjct: 202 EKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWH 258
Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV + AG+ G + T N ++ +
Sbjct: 259 PARVGCSIARAGQKGYHHRTELNKKIYRI 287
>gi|156359545|ref|XP_001624828.1| predicted protein [Nematostella vectensis]
gi|156211630|gb|EDO32728.1| predicted protein [Nematostella vectensis]
Length = 94
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 3/81 (3%)
Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
F+ +++DV G+T G GF G R L R G P RV +
Sbjct: 5 VFSPDEMIDVIGVTKGHGFKGVTYRWGTKKLP--RKTHKGLRKVACIG-AWHPARVSFSV 61
Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
AG+ G + T N ++ +
Sbjct: 62 ARAGQAGYHHRTELNKKIYRI 82
>gi|237862632|gb|ACR24941.1| ribosomal protein L3 [Lepidochitona cinerea]
Length = 351
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 31/81 (38%), Gaps = 3/81 (3%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
F +L+D+ G+T GKG G R + L R G P RV +
Sbjct: 186 EVFAQDELIDIIGVTKGKGVKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVQYS 242
Query: 161 KKMAGRMGGNRVTVKNLEVVS 181
AG+ G + T N ++
Sbjct: 243 VARAGQKGYHHRTEINKKIYR 263
>gi|149751051|ref|XP_001497954.1| PREDICTED: similar to Ribosomal protein L3-like [Equus caballus]
Length = 407
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Query: 94 VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153
V S F+ +++DV +T G+G G R + L R G
Sbjct: 202 EKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWH 258
Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV + AG+ G + T N ++ +
Sbjct: 259 PARVGCSIARAGQKGYHHRTELNKKIYRI 287
>gi|300797628|ref|NP_001178518.1| 60S ribosomal protein L3-like [Rattus norvegicus]
gi|109490334|ref|XP_001058430.1| PREDICTED: ribosomal protein L3-like [Rattus norvegicus]
Length = 407
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Query: 94 VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153
V S F+ +++DV +T G+G G R + L R G
Sbjct: 202 EKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWH 258
Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV + AG+ G + T N ++ +
Sbjct: 259 PARVGCSIARAGQKGYHHRTELNKKIYRI 287
>gi|13384820|ref|NP_079701.1| ribosomal protein L3-like isoform 2 [Mus musculus]
gi|12832343|dbj|BAB22066.1| unnamed protein product [Mus musculus]
gi|12835407|dbj|BAB23247.1| unnamed protein product [Mus musculus]
gi|148690417|gb|EDL22364.1| ribosomal protein L3-like [Mus musculus]
gi|148877901|gb|AAI45877.1| Ribosomal protein L3-like [Mus musculus]
gi|148877992|gb|AAI45879.1| Ribosomal protein L3-like [Mus musculus]
Length = 240
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/154 (20%), Positives = 49/154 (31%), Gaps = 41/154 (26%)
Query: 93 PVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152
V S F+ +++DV +T G+G G R + L R G
Sbjct: 34 MEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIG-AW 90
Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------------------------------ 182
P RV + AG+ G + T N ++ +
Sbjct: 91 HPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHMEDGKMVRNNASTSYDVTDKSITPL 150
Query: 183 -------DDKRGLILVKGCVPGAKKNSWILVRDS 209
+ I++KGC+ G KK I +R S
Sbjct: 151 GGFPHYGEVNNDFIMLKGCIAGTKKR-VITLRKS 183
>gi|110456408|gb|ABG74707.1| putative ribosomal protein L3e [Diaphorina citri]
Length = 201
Score = 50.0 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 28/74 (37%), Gaps = 3/74 (4%)
Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRM 167
++D G+T GKGF G R + L R G P RV AG+
Sbjct: 1 MIDCIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVQFTVARAGQK 57
Query: 168 GGNRVTVKNLEVVS 181
G + T N ++
Sbjct: 58 GYHHRTELNKKIYR 71
>gi|225711234|gb|ACO11463.1| 60S ribosomal protein L3 [Caligus rogercresseyi]
Length = 408
Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/155 (20%), Positives = 51/155 (32%), Gaps = 41/155 (26%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
S FT +++D G+T GKGF G R + L R G P R+
Sbjct: 209 SVFTKDEMIDTIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRIQFT 265
Query: 161 KKMAGRMGGNRVTVKNLEVVSV-------------------------------------D 183
AG+ G + T N ++ + +
Sbjct: 266 VARAGQKGYHHRTEINKKIYDIRRGFHTENGKIVKNNASTEYDIADKSINPMGGFPHYGE 325
Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFKSAVNCKG 218
K+ +++KGC G KK + +R S + K
Sbjct: 326 VKQDFVIIKGCCVGPKKR-VLTLRKSLLTHTKRKA 359
>gi|78369254|ref|NP_001030578.1| 60S ribosomal protein L3-like [Bos taurus]
gi|88932612|sp|Q3SZ10|RL3L_BOVIN RecName: Full=60S ribosomal protein L3-like
gi|74267896|gb|AAI03273.1| Ribosomal protein L3-like [Bos taurus]
gi|296473512|gb|DAA15627.1| 60S ribosomal protein L3-like [Bos taurus]
Length = 407
Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Query: 94 VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153
V S F+ +++DV +T G+G G R + L R G
Sbjct: 202 EKQVPVHSVFSQNEIIDVIAVTKGRGIKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWH 258
Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV + AG+ G + T N ++ +
Sbjct: 259 PARVGCSIARAGQKGYHHRTELNKKIYRI 287
>gi|22758910|gb|AAN05614.1| ribosomal protein L3 [Argopecten irradians]
Length = 254
Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/154 (20%), Positives = 50/154 (32%), Gaps = 41/154 (26%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
S F + + +D+ G+T GKG G R + L R G P RV
Sbjct: 62 SVFAMDENIDIIGVTKGKGVKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVQFT 118
Query: 161 KKMAGRMGGNRVTVKNLEVVS--------------------VDD-KRGL----------- 188
AG+ G + T N ++ D ++ +
Sbjct: 119 VARAGQKGYHHRTEINKKIYRMGEGTHTKDGKLVKNNASTDFDPSEKNITPMGGFPHYGE 178
Query: 189 -----ILVKGCVPGAKKNSWILVRDSFKSAVNCK 217
+++KGC G KK + +R S + K
Sbjct: 179 VNNDFVMIKGCTMGPKKR-VLTLRKSLLPSFKKK 211
>gi|55391486|gb|AAH85243.1| Rpl3l protein [Mus musculus]
Length = 281
Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/154 (20%), Positives = 49/154 (31%), Gaps = 41/154 (26%)
Query: 93 PVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQ 152
V S F+ +++DV +T G+G G R + L R G
Sbjct: 75 MEKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIG-AW 131
Query: 153 DPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------------------------------ 182
P RV + AG+ G + T N ++ +
Sbjct: 132 HPARVGCSIARAGQKGYHHRTELNKKIYRIGRGLHMEDGKMVRNNASTSYDVTDKSITPL 191
Query: 183 -------DDKRGLILVKGCVPGAKKNSWILVRDS 209
+ I++KGC+ G KK I +R S
Sbjct: 192 GGFPHYGEVNNDFIMLKGCIAGTKKR-VITLRKS 224
>gi|3914741|sp|Q29293|RL3_PIG RecName: Full=60S ribosomal protein L3
Length = 130
Score = 49.2 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 32/82 (39%), Gaps = 3/82 (3%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
F +++DV G+T GKG+ G R + L R G P R +
Sbjct: 6 QVFGQDEMIDVIGVTKGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARXAFS 62
Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
AG+ G + T N ++ +
Sbjct: 63 VARAGQKGYHHRTEINKKIYKI 84
>gi|226480224|emb|CAX78776.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 419
Score = 49.2 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/92 (22%), Positives = 35/92 (38%), Gaps = 3/92 (3%)
Query: 91 LLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGC 150
+ + F+ +++DV G+T GKGF G R + L R G
Sbjct: 199 QHFEKQIPVSNVFSQDEMIDVIGVTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIG- 255
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV ++ AG+ T N ++ +
Sbjct: 256 AWHPARVARSVARAGQKSYFHRTELNKKIYRI 287
Score = 35.7 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 32/93 (34%), Gaps = 18/93 (19%)
Query: 3 SGVVARKLGMTCV---YNIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
+ + K GMT + + G ++ PVT++ +V GY G
Sbjct: 44 TAFMGYKAGMTHIVREVDRPGSKVHKREVVEPVTIMECPPMVIVGMV-----GYAPTAKG 98
Query: 53 ---AGEAKVKNVSKPMRGFFSSVNVSPKKKLFE 82
+++++ R F KKK F
Sbjct: 99 LRTFKTVWAEHLTEECRRRFYKDWCKSKKKAFT 131
>gi|149052059|gb|EDM03876.1| rCG33081 [Rattus norvegicus]
Length = 255
Score = 48.8 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/89 (23%), Positives = 34/89 (38%), Gaps = 3/89 (3%)
Query: 94 VGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQD 153
V S F+ +++DV +T G+G G R + L R G
Sbjct: 50 EKQVPVHSVFSQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWH 106
Query: 154 PGRVFKNKKMAGRMGGNRVTVKNLEVVSV 182
P RV + AG+ G + T N ++ +
Sbjct: 107 PARVGCSIARAGQKGYHHRTELNKKIYRI 135
>gi|88597634|ref|ZP_01100867.1| ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 84-25]
gi|88189938|gb|EAQ93914.1| ribosomal protein L3 [Campylobacter jejuni subsp. jejuni 84-25]
Length = 115
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 49/124 (39%), Gaps = 14/124 (11%)
Query: 6 VARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSKPM 65
+ K+GM+ I VT+L + N +V + G V G+A K V+
Sbjct: 4 IVEKIGMSRTIT--NPSIAVTLLRVVNAKVCEV----EGGKALVAYPKGKASNKCVAGQQ 57
Query: 66 RGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
+ + S + L + D +++ V+ T G+G+SG MK
Sbjct: 58 KKYNLSAEYNRFATLEVANTEAGDLDETP--------LNEAKILKVSFNTKGRGYSGVMK 109
Query: 126 RHNF 129
RHNF
Sbjct: 110 RHNF 113
>gi|347964|gb|AAA91344.1| TARBP-b [Homo sapiens]
Length = 277
Score = 48.5 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 34/237 (14%), Positives = 61/237 (25%), Gaps = 70/237 (29%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ VT++ VV
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFK 103
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ D++G ++ K +
Sbjct: 104 TVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKDFSSMKKYCQVIRVI 163
Query: 67 GF---------FSSVNVSPKKKLFEFRVQKDD--DLLPVGSVFSPSYFTVGQLVDVTGMT 115
++ + +K D V F +++DV G+T
Sbjct: 164 AHTQMRLLPLRQKKAHLMEIQVNGGTVAEKLDWARERLEQQVPVNQVFGQDEMIDVIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRV 172
GKG+ G R + L R G P RV + AG+ G +
Sbjct: 224 KGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPVRVAFSVARAGQKGYHHR 277
>gi|323650150|gb|ADX97161.1| 60S ribosomal protein l3 [Perca flavescens]
Length = 276
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 35/236 (14%), Positives = 59/236 (25%), Gaps = 70/236 (29%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ VT++ VV
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMIVVGVVGYVETPRGLRSFK 103
Query: 39 ------------RTLDKNGYMAVQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQ 86
R KN Y + + + K + S KK R+
Sbjct: 104 TIFAEHVSDECKRRFYKNWYKSKKKAFTKYCKKWQDDDGKKQLEKDFASMKKYCQVIRII 163
Query: 87 K-----------------DDDLLPVGSVFSPSYFTV--------------GQLVDVTGMT 115
+ L + +++DV G+T
Sbjct: 164 AHTQMRLLPLAQKKSHLMEVQLNGGNISDKVDWAREKLEQAVPINTVFTQDEMIDVIGIT 223
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNR 171
G + G R + L R G P RV + AG+ G +
Sbjct: 224 KGHRYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAFSVARAGQKGYHH 276
>gi|301500876|ref|YP_003795288.1| ribosomal protein L3 [Chromera velia]
gi|300069422|gb|ADJ66530.1| ribosomal protein L3 [Chromera velia]
Length = 193
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 5/97 (5%)
Query: 106 GQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAG 165
+ + KGF G + R+ F THG S H + GS G PGRV KK+ G
Sbjct: 93 WEQFKIQTSAKQKGFLGVVARYKFTKGPKTHGSSH-HAAPGSIGAGTSPGRVLPGKKLPG 151
Query: 166 R--MGGNRVTVKNLEVVSVDDKRGLILVKGCVPGAKK 200
R + + ++SV ++ + V G +PG +K
Sbjct: 152 RRPLAKRNYMINTYRLLSV--QQNKVEVPGTLPGRRK 186
>gi|149620465|ref|XP_001511933.1| PREDICTED: similar to Ribosomal protein L3-like [Ornithorhynchus
anatinus]
Length = 342
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 31/80 (38%), Gaps = 3/80 (3%)
Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
F+ ++VDV +T G+G G R + L R G P RV +
Sbjct: 217 VFSQNEMVDVIAVTKGRGMKGVTSRWHAKKLP--RKTHKGLRKVACIG-AWHPARVGYSI 273
Query: 162 KMAGRMGGNRVTVKNLEVVS 181
AG+ G + T N ++
Sbjct: 274 ARAGQKGYHHRTEINKKIYR 293
>gi|326437430|gb|EGD83000.1| 60S ribosomal protein L3 [Salpingoeca sp. ATCC 50818]
Length = 398
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 29/81 (35%), Gaps = 3/81 (3%)
Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
F + +DV G + G+GF G R L R G P V +
Sbjct: 210 VFVQDENIDVLGASKGRGFEGVTHRWGTKRLP--RKTHKGLRKVACIG-AWHPANVQYSV 266
Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
AG+ G + T N ++ V
Sbjct: 267 ARAGQNGYHHRTEMNKKIYMV 287
>gi|297715281|ref|XP_002834016.1| PREDICTED: 60S ribosomal protein L3-like, partial [Pongo abelii]
Length = 199
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 18/79 (22%), Positives = 31/79 (39%), Gaps = 3/79 (3%)
Query: 104 TVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKM 163
+ +++DV +T G+G G R + L R G P RV +
Sbjct: 80 SQSEVIDVIAVTKGRGVKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPARVGCSIAR 136
Query: 164 AGRMGGNRVTVKNLEVVSV 182
AG+ G + T N ++ +
Sbjct: 137 AGQKGYHHRTELNKKIYRI 155
>gi|61740425|gb|AAX54475.1| ribosomal protein L3 [Lolium multiflorum]
Length = 132
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 30/81 (37%), Gaps = 3/81 (3%)
Query: 102 YFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNK 161
F +++D+ G+T GKG+ R L R G P RV
Sbjct: 35 VFQKDEMIDIIGVTKGKGYRRCRTRWGVTRLP--RKTHRGLRKVACIG-AWHPARVSYTV 91
Query: 162 KMAGRMGGNRVTVKNLEVVSV 182
AG+ G + T N +V +
Sbjct: 92 ARAGQNGYHHRTEMNKKVYKI 112
>gi|296090209|emb|CBI40028.3| unnamed protein product [Vitis vinifera]
Length = 99
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 37/80 (46%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 77 KKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATH 136
+ L EFR+ D P + F G LVDV+G+TIGKGF G +KRHNF TH
Sbjct: 1 MRHLQEFRLVSVDGFEPNQKLVFEELFKEGDLVDVSGITIGKGFQGGIKRHNFRRGPMTH 60
Query: 137 GVSISHRSHGSTGCRQDPGR 156
G S SHR+ GS G PG
Sbjct: 61 G-SKSHRALGSIGAGTTPGH 79
>gi|309266996|ref|XP_001476854.2| PREDICTED: 60S ribosomal protein L3-like, partial [Mus musculus]
Length = 180
Score = 44.6 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 24/67 (35%), Gaps = 3/67 (4%)
Query: 116 IGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVK 175
GKG+ G R + L R G P RV + AG+ G + T
Sbjct: 1 KGKGYKGVTSRWHTKKLP--RKTHRGLRKVACIG-AWHPARVAFSVARAGQKGYHYRTEI 57
Query: 176 NLEVVSV 182
N ++ +
Sbjct: 58 NKKIYKI 64
>gi|226475920|emb|CAX72050.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 202
Score = 44.6 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 26/69 (37%), Gaps = 3/69 (4%)
Query: 114 MTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVT 173
+T GKGF G R + L R G P RV ++ AG+ G T
Sbjct: 5 VTKGKGFKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPARVARSVARAGQKGYFHRT 61
Query: 174 VKNLEVVSV 182
N ++ +
Sbjct: 62 ELNKKIYRI 70
>gi|70909597|emb|CAJ17224.1| ribosomal protein L3e [Micromalthus debilis]
Length = 178
Score = 44.2 bits (103), Expect = 0.014, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 36/129 (27%), Gaps = 41/129 (31%)
Query: 118 KGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNL 177
KG+ G R + L R G P RV AG+ G + T N
Sbjct: 1 KGYKGVTSRWHTKKLP--RKTHKGLRKVACIG-AWHPSRVSFTVARAGQKGYHHRTEVNK 57
Query: 178 EVVSV-------------------------------------DDKRGLILVKGCVPGAKK 200
++ + + I++KGC G KK
Sbjct: 58 KIYRIGAGIHTKDGKVIKNNASTEYDLTEKSITPMGGFPHYGEVNNDFIMIKGCCMGPKK 117
Query: 201 NSWILVRDS 209
I +R S
Sbjct: 118 R-IITLRKS 125
>gi|213863398|ref|ZP_03386653.1| 50S ribosomal protein L3 [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
Length = 33
Score = 43.8 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 182 VDDKRGLILVKGCVPGAKKNSWILVRDSFKS 212
VD + G++L+KG VPG + ++VR + K
Sbjct: 1 VDAENGVLLIKGAVPG-RTGGLVMVRSAIKR 30
>gi|119630150|gb|EAX09745.1| hCG1794419, isoform CRA_a [Homo sapiens]
Length = 188
Score = 41.5 bits (96), Expect = 0.071, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 31/78 (39%), Gaps = 7/78 (8%)
Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTG--CRQDPGRVFKNKKMAG 165
++D+ G+T GKG+ G + L +HR P V + AG
Sbjct: 1 MIDIIGVTKGKGYKGVTSCWHTKKLP-----HKTHRGLCKVAWIGAWHPDHVAFSMACAG 55
Query: 166 RMGGNRVTVKNLEVVSVD 183
+ G + T N ++ +D
Sbjct: 56 QKGDHHHTEINKKICKID 73
>gi|987972|emb|CAA90883.1| ribosomal protein L3 [Rickettsia prowazekii]
Length = 23
Score = 41.1 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 20/23 (86%)
Query: 1 MRSGVVARKLGMTCVYNIEGRRI 23
MR+G++A+K+GMT V+N +G RI
Sbjct: 1 MRTGIIAQKVGMTSVFNDKGERI 23
>gi|325577125|ref|ZP_08147609.1| AT family autotransporter/adhesin [Haemophilus parainfluenzae
ATCC 33392]
gi|325160707|gb|EGC72828.1| AT family autotransporter/adhesin [Haemophilus parainfluenzae
ATCC 33392]
Length = 1348
Score = 40.0 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 2 RSGVVARKLGMTCVYNIEGRRIPV 25
G+V RK+G+T ++ +G + V
Sbjct: 1 MIGLVGRKVGVTRIFKEDGVSVAV 24
>gi|148682756|gb|EDL14703.1| mCG1036344 [Mus musculus]
Length = 360
Score = 40.0 bits (92), Expect = 0.22, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 30/82 (36%), Gaps = 4/82 (4%)
Query: 101 SYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKN 160
F +++ V +T GKG+ G R + L R G P RV +
Sbjct: 213 QVFGQDEMIIVIDVTKGKGYKGVTSRWHTKKLP--RKTHQGLRKVACIG-AWHPARVAFS 269
Query: 161 KKMAGRMGGNRVTVKNLEVVSV 182
AG+ G + N ++ +
Sbjct: 270 VAQAGQKGYHHRKETN-KIYKI 290
>gi|316971139|gb|EFV54965.1| putative ribosomal protein L3 [Trichinella spiralis]
Length = 180
Score = 39.6 bits (91), Expect = 0.27, Method: Composition-based stats.
Identities = 19/124 (15%), Positives = 34/124 (27%), Gaps = 13/124 (10%)
Query: 3 SGVVARKLGMTCV---YNIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
+ + K GMT + + G +I VTVL +V + GY+ G
Sbjct: 60 TAFIGYKAGMTHIVREVDKPGSKINKKDVVEAVTVLETPPMVIVGKCVV---GYIETPQG 116
Query: 53 AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
K K + +D+ + +++ V
Sbjct: 117 LRAFKTIWAEHLSDDCKRRYKCERKAFTKASKKWQDEAGVKEIQTDFARMIKYCKVIRVI 176
Query: 113 GMTI 116
T
Sbjct: 177 AHTQ 180
>gi|56541782|emb|CAI30273.1| hypothetical protein [Pongo abelii]
Length = 202
Score = 39.6 bits (91), Expect = 0.32, Method: Composition-based stats.
Identities = 13/106 (12%), Positives = 26/106 (24%), Gaps = 12/106 (11%)
Query: 3 SGVVARKLGMTCV---YNIEGRRI-------PVTVLHLDNCQVVVHR--TLDKNGYMAVQ 50
+ + K GMT + + G ++ VT++ VV G +
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFK 103
Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGS 96
E + + K + +D
Sbjct: 104 TVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKD 149
>gi|291391876|ref|XP_002712286.1| PREDICTED: ribosomal protein L3-like [Oryctolagus cuniculus]
Length = 188
Score = 39.6 bits (91), Expect = 0.34, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 31/77 (40%), Gaps = 7/77 (9%)
Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCR--QDPGRVFKNKKMAG 165
+++VTG+T GKG+ G R + L +HR C R + A
Sbjct: 1 MINVTGVTKGKGYKGVTSRWHTKKLP-----RKTHRGLPKVACIGAWHLARKAFSVAWAR 55
Query: 166 RMGGNRVTVKNLEVVSV 182
+ G + T N ++ +
Sbjct: 56 QKGYHHRTEINKKIYKI 72
>gi|224105031|ref|XP_002333867.1| predicted protein [Populus trichocarpa]
gi|222838758|gb|EEE77109.1| predicted protein [Populus trichocarpa]
Length = 152
Score = 39.2 bits (90), Expect = 0.43, Method: Composition-based stats.
Identities = 19/105 (18%), Positives = 29/105 (27%), Gaps = 33/105 (31%)
Query: 136 HGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSV------------- 182
R G P RV AG+ G + T N ++ +
Sbjct: 6 RKTHRGLRKVACIG-AWHPARVSFTVARAGQNGYHHRTELNKKIYKLGKCGQESHCAVTE 64
Query: 183 ------------------DDKRGLILVKGCVPGAKKNSWILVRDS 209
K +++KGC G KK + +R S
Sbjct: 65 YDRTEKDITPIGGFPHYGVVKEDYLMIKGCCVGPKKR-VVTLRQS 108
>gi|324520529|gb|ADY47657.1| 60S ribosomal protein L3 [Ascaris suum]
Length = 193
Score = 38.8 bits (89), Expect = 0.47, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 31/92 (33%), Gaps = 12/92 (13%)
Query: 3 SGVVARKLGMTCV---YNIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
+ + K GMT + + G ++ VT+L +V Q
Sbjct: 49 TAFIGFKAGMTHIVREVDKPGSKVNKKEVVEAVTILETPPMVIVGIVGYIDTPRGPRQ-- 106
Query: 53 AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFR 84
+++S+ R F + KKK F+
Sbjct: 107 FKTVWAEHLSEDCRRRFYKNWHTSKKKAFQKH 138
>gi|224095129|ref|XP_002195484.1| PREDICTED: similar to ribosomal protein L3 [Taeniopygia guttata]
Length = 177
Score = 38.8 bits (89), Expect = 0.48, Method: Composition-based stats.
Identities = 12/106 (11%), Positives = 27/106 (25%), Gaps = 12/106 (11%)
Query: 3 SGVVARKLGMTCV---YNIEGRRI-------PVTVLHLDNCQVVVHR--TLDKNGYMAVQ 50
+ + K GMT + + G ++ VT++ +V G + +
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIIETPPMVIVGIVGYVQTPRGLRSFK 103
Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGS 96
E + + K + +D
Sbjct: 104 TIFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDEDGKKQLEKD 149
>gi|322822610|gb|EFZ28610.1| ribosomal protein L3, putative [Trypanosoma cruzi]
Length = 173
Score = 38.4 bits (88), Expect = 0.71, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 26/81 (32%), Gaps = 18/81 (22%)
Query: 5 VVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVGA- 53
+ K GMT + + G ++ PVT+L VV GY VG
Sbjct: 80 FMVFKAGMTHIVRDVDRPGSKVNKKEVVEPVTILEAPPMVVVGIV-----GYRQTPVGHK 134
Query: 54 --GEAKVKNVSKPMRGFFSSV 72
G + S R F
Sbjct: 135 TIGTVWAHHTSVEFRRRFYKN 155
>gi|71416007|ref|XP_810050.1| ribosomal protein L13 [Trypanosoma cruzi strain CL Brener]
gi|70874525|gb|EAN88199.1| ribosomal protein L13, putative [Trypanosoma cruzi]
Length = 221
Score = 38.4 bits (88), Expect = 0.75, Method: Composition-based stats.
Identities = 19/81 (23%), Positives = 26/81 (32%), Gaps = 18/81 (22%)
Query: 5 VVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVGA- 53
+ K GMT + + G ++ PVT+L VV GY VG
Sbjct: 46 FMVFKAGMTHIVRDVDRPGSKVNKKEVVEPVTILEAPPMVVVGIV-----GYRQTPVGHK 100
Query: 54 --GEAKVKNVSKPMRGFFSSV 72
G + S R F
Sbjct: 101 TIGTVWAHHTSVEFRRRFYKN 121
>gi|124783060|gb|ABN14901.1| ribosomal protein L3 [Taenia asiatica]
Length = 224
Score = 38.4 bits (88), Expect = 0.76, Method: Composition-based stats.
Identities = 25/170 (14%), Positives = 47/170 (27%), Gaps = 30/170 (17%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
+ + K GMT V + G ++ PVT+L +V GY+ G
Sbjct: 44 TAFMGFKAGMTHVVRDVDRPGSKVHKKEIIEPVTILECPPMVIVGIV-----GYIPTARG 98
Query: 53 ---AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109
+++S+ R F K+K F + K + + + +
Sbjct: 99 LRTFKTIWAEHLSEECRRRFYKDFCKSKRKAFT-KASKKWADEAGLAAINNDIKKMKKYC 157
Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159
V + + H +H +V
Sbjct: 158 SVIRVI-----------AHTQMRLMKHRQKKAHIMEIQVNGGTVAQKVDW 196
>gi|24645875|ref|NP_731547.1| ribosomal protein L3, isoform D [Drosophila melanogaster]
gi|23170972|gb|AAF54612.2| ribosomal protein L3, isoform D [Drosophila melanogaster]
Length = 161
Score = 37.7 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 16/43 (37%), Gaps = 10/43 (23%)
Query: 5 VVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVV 37
+ K GMT + + G +I VTVL VV
Sbjct: 46 FIGYKAGMTHIVREADRPGSKINKKEVVEAVTVLETPPMIVVG 88
>gi|320542629|ref|NP_731550.2| ribosomal protein L3, isoform G [Drosophila melanogaster]
gi|318068758|gb|AAF54611.2| ribosomal protein L3, isoform G [Drosophila melanogaster]
Length = 138
Score = 37.7 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 16/43 (37%), Gaps = 10/43 (23%)
Query: 5 VVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVV 37
+ K GMT + + G +I VTVL VV
Sbjct: 46 FIGYKAGMTHIVREADRPGSKINKKEVVEAVTVLETPPMIVVG 88
>gi|149065895|gb|EDM15768.1| ribosomal protein L3, isoform CRA_a [Rattus norvegicus]
Length = 238
Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 12/106 (11%), Positives = 24/106 (22%), Gaps = 12/106 (11%)
Query: 3 SGVVARKLGMTCV---YNIEGRRI-------PVTVLHLDNCQVVVHR--TLDKNGYMAVQ 50
+ + K GMT + + G ++ VT++ VV G +
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFK 103
Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGS 96
E + + K +
Sbjct: 104 TVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDDTGKKQLEKD 149
>gi|148672668|gb|EDL04615.1| mCG11520, isoform CRA_a [Mus musculus]
Length = 238
Score = 37.7 bits (86), Expect = 1.3, Method: Composition-based stats.
Identities = 12/106 (11%), Positives = 24/106 (22%), Gaps = 12/106 (11%)
Query: 3 SGVVARKLGMTCV---YNIEGRRI-------PVTVLHLDNCQVVVHR--TLDKNGYMAVQ 50
+ + K GMT + + G ++ VT++ VV G +
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGIVGYVETPRGLRTFK 103
Query: 51 VGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGS 96
E + + K +
Sbjct: 104 TVFAEHISDECKRRFYKNWHKSKKKAFTKYCKKWQDDTGKKQLEKD 149
>gi|84998984|ref|XP_954213.1| 60S ribosomal protein l3 [Theileria annulata]
gi|65305211|emb|CAI73536.1| 60S ribosomal protein l3, putative [Theileria annulata]
Length = 203
Score = 37.3 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 31/93 (33%), Gaps = 18/93 (19%)
Query: 3 SGVVARKLGMTCVYNI---EGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
+ + K GMT V G ++ VT++ VV GY+ G
Sbjct: 44 TAFIGYKAGMTHVVTEVDRPGSKLHKKEIVEAVTIVETPPMIVVGLV-----GYVETPRG 98
Query: 53 ---AGEAKVKNVSKPMRGFFSSVNVSPKKKLFE 82
G ++S +R F KKK F
Sbjct: 99 LKVLGTVWAGHLSDELRRRFYKNWYKSKKKAFT 131
>gi|284073162|gb|ADB77820.1| 60S ribosomal protein L3 [Mesostigma viride]
Length = 225
Score = 37.3 bits (85), Expect = 1.7, Method: Composition-based stats.
Identities = 18/106 (16%), Positives = 37/106 (34%), Gaps = 12/106 (11%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
+ + K GMT + + G ++ VT++ + VV K +
Sbjct: 40 TAFMGFKAGMTHILREVDKPGSKLHKKETCEAVTIIEVPAMVVVGVTGYAKTTGGLKTI- 98
Query: 53 AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVF 98
G K+++ ++ F KKK F +K ++ +
Sbjct: 99 -GTVWAKHLNDEVKRRFYKNWYKSKKKAFTKYAKKVENDKELQESL 143
>gi|284073158|gb|ADB77818.1| 60S ribosomal protein L3 [Entransia fimbriata]
Length = 236
Score = 36.9 bits (84), Expect = 2.3, Method: Composition-based stats.
Identities = 16/148 (10%), Positives = 39/148 (26%), Gaps = 25/148 (16%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVV----HRTLDKNGYMA 48
+ + K GMT + + G ++ VT++ VV +T G +
Sbjct: 40 TAFMGYKAGMTHIMRDVDKPGSKLHKKEACEAVTIIEAPPIVVVGLVGYVKTP--RGLRS 97
Query: 49 VQVGAGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQL 108
+ + + V + ++ K + + +
Sbjct: 98 LVTVWAQHLSEEVIRRFYKNYAKSKKKAFTKYRKQYDNPEGKK---------DVDKQLER 148
Query: 109 VDVTGMTIGKGFSGAMKRHNFGGLRATH 136
+ I +K+ + H
Sbjct: 149 MKKYCQVIRVLAHTQVKKVKGIRQKKAH 176
>gi|225706934|gb|ACO09313.1| 60S ribosomal protein L3 [Osmerus mordax]
Length = 143
Score = 36.5 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 17/46 (36%), Gaps = 10/46 (21%)
Query: 3 SGVVARKLGMTCV---YNIEGRRI-------PVTVLHLDNCQVVVH 38
+ + K GMT + + G ++ VT++ VV
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMIVVGV 89
>gi|324523353|gb|ADY48234.1| 60S ribosomal protein L3 [Ascaris suum]
Length = 264
Score = 36.5 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 17/92 (18%), Positives = 31/92 (33%), Gaps = 12/92 (13%)
Query: 3 SGVVARKLGMTCV---YNIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
+ + K GMT + + G ++ VT+L +V Q
Sbjct: 47 TAFIGFKAGMTHIVREVDKPGSKVNKKEVVEAVTILETPPMVIVGIVGYIDTPRGPRQ-- 104
Query: 53 AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFR 84
+++S+ R F + KKK F+
Sbjct: 105 FKTVWAEHLSEDCRRRFYKNWHTSKKKAFQKH 136
>gi|284073166|gb|ADB77822.1| 60S ribosomal protein L3 [Phyllodictyon orientale]
Length = 236
Score = 36.5 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 43/136 (31%), Gaps = 12/136 (8%)
Query: 3 SGVVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
+ + K GMT + + G ++ PVT++ VV Q
Sbjct: 43 TAFMGFKAGMTHIVRDVDKPGSKVHKKEVCEPVTIVECPPMVVVGVVGYATT--HRGQRT 100
Query: 53 AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVT 112
G A +++ +R F KKK F+ K DD ++ V
Sbjct: 101 IGCAWAAHINDTLRRRFYKNWYRAKKKAFKKHATKYDDGAKTIMAQLEHLKKEATVIRVL 160
Query: 113 GMTIGKGFSGAMKRHN 128
T +K+ +
Sbjct: 161 AHTQPDMVRLGIKKAH 176
>gi|154343493|ref|XP_001567692.1| ribosomal protein l3 [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134065024|emb|CAM43136.1| putative ribosomal protein L3 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 131
Score = 36.5 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 25/84 (29%), Gaps = 15/84 (17%)
Query: 5 VVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG 54
+ K GMT + + G ++ PVT+L VV GY VG
Sbjct: 46 FMVFKAGMTHIVRDVDRPGSKVNKKEVVEPVTILEAPPMVVVGIV-----GYRQTPVGLK 100
Query: 55 EAKVKNVSKPMRGFFSSVNVSPKK 78
F + K+
Sbjct: 101 TMGTVWAHHTSVEFRRRYYKNWKQ 124
>gi|8572153|gb|AAF77028.1|AF247847_1 ribosomal protein L3 [Caenorhabditis briggsae]
Length = 246
Score = 36.5 bits (83), Expect = 2.8, Method: Composition-based stats.
Identities = 24/203 (11%), Positives = 51/203 (25%), Gaps = 68/203 (33%)
Query: 3 SGVVARKLGMTCV---YNIEGRRI-------PVTVLHLDNCQVVVH-------------- 38
+ + K GMT + + G ++ V+++ +
Sbjct: 44 TAFLGYKAGMTHIVRDVDKPGSKVNKKEVVEAVSIIETPPMVIAGVTGYIDTPQGPRALT 103
Query: 39 --------------------------------RTLDKNGYMAVQVGAGEAKVKNVSKPMR 66
+ D++G ++ + K S +
Sbjct: 104 TIWAEHLSEEARRRFYSNWAKSKKKAFTKYAKKWQDEDGKKLIEADFAKLKKYCSSIRVI 163
Query: 67 GFF----------SSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPS-YFTVGQLVDVTGMT 115
+ V + + D + F+ +++D G+T
Sbjct: 164 AHTQMKILRRRQKKAHLVEIQINGGTIEQKVDWAREHLEKQIQVDTVFSQDEMIDTIGVT 223
Query: 116 IGKGFSGAMKRHNFGGLR-ATHG 137
G GF G R + L TH
Sbjct: 224 KGHGFKGVTSRWHTKKLPRKTHK 246
>gi|284073160|gb|ADB77819.1| 60S ribosomal protein L3 [Klebsormidium flaccidum]
Length = 204
Score = 36.1 bits (82), Expect = 3.6, Method: Composition-based stats.
Identities = 16/117 (13%), Positives = 34/117 (29%), Gaps = 12/117 (10%)
Query: 5 VVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG 54
+ K GMT + + G ++ VT++ +V K +
Sbjct: 41 FLGYKAGMTHIMRDVDKPGSKLHKKETCEAVTIVETPPMVIVGVVGYIKTPRGLRSLA-- 98
Query: 55 EAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDV 111
+++ + ++ F KKK F V+ + + V
Sbjct: 99 TVWAQHLDESVKRRFYKRFGQSKKKAFTKYVKSKYGDGEGKKGVDSDLERIKKYCSV 155
>gi|226475930|emb|CAX72055.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 217
Score = 35.7 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 22/170 (12%), Positives = 46/170 (27%), Gaps = 30/170 (17%)
Query: 3 SGVVARKLGMTCV---YNIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
+ + K GMT + + G ++ PVT++ +V GY G
Sbjct: 44 TAFMGYKAGMTHIVREVDRPGSKVHKREVVEPVTIMECPPMVIVGMV-----GYAPTAKG 98
Query: 53 ---AGEAKVKNVSKPMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLV 109
+++++ R F KKK F + + ++ + + +
Sbjct: 99 LRTFKTVWAEHLTEECRRRFYKDWCKSKKKAFT-KASRKWADEAGLALINRDLKKIKKYC 157
Query: 110 DVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFK 159
V + H +H +V
Sbjct: 158 TV-----------VRAIAHTQMRLMKHRQKKAHIMEIQVNGGTISQKVDW 196
>gi|154336587|ref|XP_001564529.1| ribosomal protein l3 [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 226
Score = 35.7 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 17/84 (20%), Positives = 25/84 (29%), Gaps = 15/84 (17%)
Query: 5 VVARKLGMTCVY---NIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVGAG 54
+ K GMT + + G ++ PVT+L VV GY VG
Sbjct: 46 FMVFKAGMTHIVRDVDRPGSKVNKKEVVEPVTILEAPPMVVVGIV-----GYRQTPVGLK 100
Query: 55 EAKVKNVSKPMRGFFSSVNVSPKK 78
F + K+
Sbjct: 101 TMGTVWAHHTSVEFRRRYYKNWKQ 124
>gi|119580724|gb|EAW60320.1| ribosomal protein L3, isoform CRA_i [Homo sapiens]
gi|194387408|dbj|BAG60068.1| unnamed protein product [Homo sapiens]
Length = 122
Score = 35.7 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 17/46 (36%), Gaps = 10/46 (21%)
Query: 3 SGVVARKLGMTCV---YNIEGRRI-------PVTVLHLDNCQVVVH 38
+ + K GMT + + G ++ VT++ VV
Sbjct: 44 TAFLGYKAGMTHIVREVDRPGSKVNKKEVVEAVTIVETPPMVVVGI 89
>gi|242083110|ref|XP_002441980.1| hypothetical protein SORBIDRAFT_08g006346 [Sorghum bicolor]
gi|241942673|gb|EES15818.1| hypothetical protein SORBIDRAFT_08g006346 [Sorghum bicolor]
Length = 87
Score = 35.7 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
Query: 7 ARKLGMTCVYNIE-GRRIPVTVLHL--DNCQVVVHRTLDKNG 45
A K+GM + E G+ +PVT++ V + G
Sbjct: 46 ATKVGMMTYFEPEMGKPVPVTIVGFWEGGNMVTQVKKTAATG 87
>gi|269864203|ref|XP_002651490.1| LSU ribosomal protein L3P [Enterocytozoon bieneusi H348]
gi|220064427|gb|EED42567.1| LSU ribosomal protein L3P [Enterocytozoon bieneusi H348]
Length = 125
Score = 35.7 bits (81), Expect = 4.9, Method: Composition-based stats.
Identities = 16/81 (19%), Positives = 26/81 (32%), Gaps = 29/81 (35%)
Query: 158 FKNKKMAGRMGGNRVTVKNLEVVSV----------------------------DDKRGLI 189
+ AG++G +R T +NL V + I
Sbjct: 1 MYSVARAGQVGFHRRTQQNLLVYDIGNGKQPIQTDFDLTVKTINPMGGFPHYGQVTNDYI 60
Query: 190 LVKGCVPGAKKNSWILVRDSF 210
++KGCV G K + +R
Sbjct: 61 MLKGCVTGPCKR-VVTLRKPV 80
>gi|226480234|emb|CAX78781.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 215
Score = 35.7 bits (81), Expect = 5.0, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 32/93 (34%), Gaps = 18/93 (19%)
Query: 3 SGVVARKLGMTCV---YNIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
+ + K GMT + + G ++ PVT++ +V GY G
Sbjct: 44 TAFMGYKAGMTHIVREVDRPGSKVHKREVVEPVTIMECPPMVIVGMV-----GYAPTAKG 98
Query: 53 ---AGEAKVKNVSKPMRGFFSSVNVSPKKKLFE 82
+++++ R F KKK F
Sbjct: 99 LRTFKTVWAEHLTEECRRRFYKDWCKSKKKAFT 131
>gi|160550199|gb|ABX44804.1| putative 60S ribosomal protein RPL3 [Flustra foliacea]
Length = 185
Score = 35.4 bits (80), Expect = 5.1, Method: Composition-based stats.
Identities = 20/93 (21%), Positives = 32/93 (34%), Gaps = 18/93 (19%)
Query: 3 SGVVARKLGMTCVYNI---EGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
+ + K GMT + G ++ VT++ VV GY+ G
Sbjct: 44 TAFLGYKAGMTHIVREVNRPGSKVNKKEIVEAVTIIETPPLVVVGV-----TGYIETPRG 98
Query: 53 ---AGEAKVKNVSKPMRGFFSSVNVSPKKKLFE 82
G +++S+ R F KKK F
Sbjct: 99 LRTLGTIWAEHLSEECRRRFYKNWYHAKKKAFT 131
>gi|150865289|ref|XP_001384440.2| Part of small ribosomal subunit (SSU) processosome (contains U3
snoRNA) [Scheffersomyces stipitis CBS 6054]
gi|149386545|gb|ABN66411.2| Part of small ribosomal subunit (SSU) processosome (contains U3
snoRNA) [Scheffersomyces stipitis CBS 6054]
Length = 1699
Score = 35.4 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 24/121 (19%), Positives = 42/121 (34%), Gaps = 11/121 (9%)
Query: 108 LVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHG-----STGCRQDPGRVFKNKK 162
+ G +G+ + + + G S R G + V ++
Sbjct: 435 FLKFGGSILGQVHNSKIDKDKTLEHDFNLGSKHSARVIGFNSIDNLLVLTMESHVINSQY 494
Query: 163 MAGRMGGNRVTVKNLEVVSVDDKRGLILVK------GCVPGAKKNSWILVRDSFKSAVNC 216
+ N VK+ E++ V + G I++K G VPG+ + LV K V
Sbjct: 495 LHASDVPNGTAVKSCEIIKVLPEAGGIVIKVLDEFEGFVPGSHMSDIKLVYPERKFKVGS 554
Query: 217 K 217
K
Sbjct: 555 K 555
>gi|68011480|ref|XP_671157.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56487082|emb|CAH93715.1| hypothetical protein PB000142.00.0 [Plasmodium berghei]
Length = 139
Score = 35.4 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 19/96 (19%), Positives = 30/96 (31%), Gaps = 31/96 (32%)
Query: 151 RQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDDKR------------------------ 186
P RV G+ G T +N ++ + K+
Sbjct: 4 AWHPARVQFQVPRHGQKGYFHRTERNKKIYRIGLKKDKNNASTDADITEKKITPMGGFPH 63
Query: 187 ------GLILVKGCVPGAKKNSWILVRDSFKSAVNC 216
IL+KGC+ G KK I +R + V+
Sbjct: 64 YGVVNEDFILLKGCISGTKKRP-ITLRKTLVPQVSR 98
>gi|226480250|emb|CAX78789.1| ribosomal protein L3 [Schistosoma japonicum]
Length = 228
Score = 35.4 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 18/93 (19%), Positives = 32/93 (34%), Gaps = 18/93 (19%)
Query: 3 SGVVARKLGMTCV---YNIEGRRI-------PVTVLHLDNCQVVVHRTLDKNGYMAVQVG 52
+ + K GMT + + G ++ PVT++ +V GY G
Sbjct: 44 TAFMGYKAGMTHIVREVDRPGSKVHKREVVEPVTIMECPPMVIVGMV-----GYAPTAKG 98
Query: 53 ---AGEAKVKNVSKPMRGFFSSVNVSPKKKLFE 82
+++++ R F KKK F
Sbjct: 99 LRTFKTVWAEHLTEECRRRFYKDWCKSKKKAFT 131
>gi|148807241|gb|ABR13330.1| putative 60S ribosomal protein L3 [Prunus dulcis]
Length = 284
Score = 35.4 bits (80), Expect = 6.6, Method: Composition-based stats.
Identities = 17/80 (21%), Positives = 26/80 (32%), Gaps = 3/80 (3%)
Query: 87 KDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMKRHNFGGLRATHGVSISHRSHG 146
+ V + F +++D+ G+T GKG+ G + R L R
Sbjct: 202 EFAKSFFEKQVPIDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLP--RKTHRGLRKVA 259
Query: 147 STGCRQDPGRVFKNKKMAGR 166
G P R AG
Sbjct: 260 CIG-AWHPARFSXTVARAGH 278
>gi|302689163|ref|XP_003034261.1| hypothetical protein SCHCODRAFT_233218 [Schizophyllum commune H4-8]
gi|300107956|gb|EFI99358.1| hypothetical protein SCHCODRAFT_233218 [Schizophyllum commune H4-8]
Length = 192
Score = 35.0 bits (79), Expect = 7.7, Method: Composition-based stats.
Identities = 8/28 (28%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Query: 184 DKRGLILVKGCVPGAKKNSWILVRDSFK 211
+ +++KG +P + K I +R S K
Sbjct: 99 AEHNFLVLKGSIP-STKQRIITIRKSLK 125
>gi|156376964|ref|XP_001630628.1| predicted protein [Nematostella vectensis]
gi|156217652|gb|EDO38565.1| predicted protein [Nematostella vectensis]
Length = 216
Score = 35.0 bits (79), Expect = 8.4, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 16/46 (34%), Gaps = 10/46 (21%)
Query: 3 SGVVARKLGMTCV----------YNIEGRRIPVTVLHLDNCQVVVH 38
+ + K GMT + N + + VT++ VV
Sbjct: 44 TAFIGFKAGMTHILREVEKPGSKLNKKEKVEAVTIIETPPMMVVGV 89
>gi|259415511|ref|ZP_05739432.1| peptidylprolyl isomerase, fkbp-type [Silicibacter sp. TrichCH4B]
gi|259348741|gb|EEW60503.1| peptidylprolyl isomerase, fkbp-type [Silicibacter sp. TrichCH4B]
Length = 142
Score = 34.6 bits (78), Expect = 9.4, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Query: 10 LG-MTCVYNIEGRRIPVTVLHLDNCQVV 36
+G M + EG+ +PVTV+ +D V
Sbjct: 93 IGTMLQMQTPEGQVLPVTVIEVDEASVT 120
Database: nr
Posted date: May 13, 2011 4:10 AM
Number of letters in database: 999,999,932
Number of sequences in database: 2,987,209
Database: /data/usr2/db/fasta/nr.01
Posted date: May 13, 2011 4:17 AM
Number of letters in database: 999,998,956
Number of sequences in database: 2,896,973
Database: /data/usr2/db/fasta/nr.02
Posted date: May 13, 2011 4:23 AM
Number of letters in database: 999,999,979
Number of sequences in database: 2,907,862
Database: /data/usr2/db/fasta/nr.03
Posted date: May 13, 2011 4:29 AM
Number of letters in database: 999,999,513
Number of sequences in database: 2,932,190
Database: /data/usr2/db/fasta/nr.04
Posted date: May 13, 2011 4:33 AM
Number of letters in database: 792,586,372
Number of sequences in database: 2,260,650
Lambda K H
0.314 0.140 0.427
Lambda K H
0.267 0.0430 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,130,742,241
Number of Sequences: 13984884
Number of extensions: 107759937
Number of successful extensions: 230903
Number of sequences better than 10.0: 2769
Number of HSP's better than 10.0 without gapping: 2622
Number of HSP's successfully gapped in prelim test: 147
Number of HSP's that attempted gapping in prelim test: 221042
Number of HSP's gapped (non-prelim): 4137
length of query: 221
length of database: 4,792,584,752
effective HSP length: 134
effective length of query: 87
effective length of database: 2,918,610,296
effective search space: 253919095752
effective search space used: 253919095752
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.4 bits)
S2: 78 (34.6 bits)