RPSBLAST alignment for GI: 254780261 and conserved domain: TIGR03625

>gnl|CDD|163362 TIGR03625, L3_bact, 50S ribosomal protein L3, bacterial. This model describes bacterial (and mitochondrial and chloroplast) class of ribosomal protein L3. A separate model describes the archaeal form, where both belong to Pfam family pfam00297. The name is phrased to meet the needs of bacterial genome annotation. Organellar forms typically will have transit peptides, N-terminal to the region modeled here. Length = 202
 Score =  291 bits (748), Expect = 9e-80
 Identities = 108/204 (52%), Positives = 139/204 (68%), Gaps = 2/204 (0%)

Query: 4   GVVARKLGMTCVYNIEGRRIPVTVLHLDNCQVVVHRTLDKNGYMAVQVGAGEAKVKNVSK 63
           G++ +K+GMT ++  +G+ +PVTV+ +    V   +T++K+GY AVQ+G GE K K V+K
Sbjct: 1   GLLGKKVGMTQIFTEDGKAVPVTVIEVGPNVVTQVKTVEKDGYSAVQLGFGEKKEKRVNK 60

Query: 64  PMRGFFSSVNVSPKKKLFEFRVQKDDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGA 123
           P  G F+   V PK+ L EFRV  D +   VG   +   F  GQ VDVTG + GKGF+G 
Sbjct: 61  PEAGHFAKAGVEPKRHLREFRV-DDLEGYEVGDEITVDIFEAGQKVDVTGTSKGKGFAGV 119

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           MKRHNF G  A+HG S SHR+ GS G RQ PGRVFK KKMAG MG  RVTV+NLEVV VD
Sbjct: 120 MKRHNFSGGPASHGNSKSHRAPGSIGQRQTPGRVFKGKKMAGHMGNERVTVQNLEVVKVD 179

Query: 184 DKRGLILVKGCVPGAKKNSWILVR 207
            +R L+LVKG VPGA K S +L++
Sbjct: 180 AERNLLLVKGAVPGA-KGSLVLIK 202