RPSBLAST alignment for GI: 254780261 and conserved domain: TIGR03626

>gnl|CDD|163363 TIGR03626, L3_arch, archaeal ribosomal protein L3. This model describes exclusively the archaeal class of ribosomal protein L3. A separate model (TIGR03625) describes the bacterial/organelle form, and both belong to Pfam family pfam00297. Eukaryotic proteins are excluded from this model. Length = 330

 Score = 63.9 bits (156), Expect = 3e-11
 Identities = 48/154 (31%), Positives = 63/154 (40%), Gaps = 32/154 (20%)

Query: 76  PKKK--LFEFRVQKDD---------DLLPVGSVFSPS-YFTVGQLVDVTGMTIGKGFSGA 123
           PKKK  + E R+              +L  G   S S  F  GQLVDV  +T GKGF G 
Sbjct: 151 PKKKPEIMEIRIGGGSVEERFEYALSIL--GKEISVSDVFKEGQLVDVIAVTKGKGFQGV 208

Query: 124 MKRHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVD 183
           +KR     L   H      R  G+ G    P RV      AG+MG ++ T  N  ++ + 
Sbjct: 209 VKRWGVKLLPRKHKRRKGGRHIGTLGPWT-PSRVRWTVPQAGQMGYHQRTEYNKRILKIG 267

Query: 184 D------------KRGL-----ILVKGCVPGAKK 200
           +              GL     +L+KG VPG  K
Sbjct: 268 EDGDEITPKGGFVNYGLVRNDYVLIKGSVPGPSK 301