RPSBLAST alignment of GI: 254780261 and MMDB domain: 1vq8_B_

>1vq8_B (B:) 50S ribosomal protein L3P; ribosome 50S, protein-protein complex, RNA-RNA complex, protein-RNA complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui}Length = 338

 Score =  157 bits (398), Expect = 1e-39
 Identities = 45/282 (15%), Positives = 72/282 (25%), Gaps = 73/282 (25%)

Query: 1   MRSGVVARKLGMTCVYNIEGR----------RIPVTVLHLDNCQVVVHRTLDKNGYMAVQ 50
              G    K GMT V  +              +PVTV+     + V  R  +   Y    
Sbjct: 38  GVQGFAGYKAGMTHVVLVNDEPNSPREGMEETVPVTVIETPPMRAVALRAYEDTPYGQRP 97

Query: 51  VGAGEA------KVKNVSKPMRGFFSSVNVSPKKKLFEFRVQK----------------- 87
           +             + +  P      +     +       +                   
Sbjct: 98  LTEVWTDEFHSELDRTLDVPEDHDPDAAEEQIRDAHEAGDLGDLRLITHTVPDAVPSVPK 157

Query: 88  ----------------------DDDLLPVGSVFSPSYFTVGQLVDVTGMTIGKGFSGAMK 125
                                  D +   G       F  G+  DV G+T GKG  G +K
Sbjct: 158 KKPDVMETRVGGGSVSDRLDHALDIVEDGGEHAMNDIFRAGEYADVAGVTKGKGTQGPVK 217

Query: 126 RHNFGGLRATHGVSISHRSHGSTGCRQDPGRVFKNKKMAGRMGGNRVTVKNLEVVSVDD- 184
           R      +  H      R         +P RV       G+ G ++ T  N  ++ + + 
Sbjct: 218 RWGVQKRKGKHARQGWRR-RIGNLGPWNPSRVRSTVPQQGQTGYHQRTELNKRLIDIGEG 276

Query: 185 ---------------KRGLILVKGCVPGAKKNSWILVRDSFK 211
                               LVKG VPG      +  R + +
Sbjct: 277 DEPTVDGGFVNYGEVDGPYTLVKGSVPGP-DKRLVRFRPAVR 317