HHsearch alignment for GI: 254780262 and conserved domain: CHL00135

Probab=100.00  E-value=2.2e-42  Score=268.19  Aligned_cols=103  Identities=45%  Similarity=0.753  Sum_probs=100.6

Q ss_pred             CCCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHCCEECCCCCCCCEEEEEEEECCCCCCCCCHHHHHEEEEEEEEEEECC
Q ss_conf             98864899999971688999999999999997188011564898213699873067898631423522334457879769
Q gi|254780262|r    2 TSRNIRICICLKAFDSRILDSSMREIVLTTKKSGSQIVGPIPFPRSIRRFTVNRSPHVDKKSRDQLEMRIYKRLLYIIKP   81 (104)
Q Consensus         2 ~~~~~kirIkl~s~d~~~Ld~~~~~i~~~a~~~g~~v~GpipLPtk~~~~tvlrSPhv~KksreqfE~r~hkRlI~i~~~   81 (104)
T Consensus         3 ~~~~~kiRIkL~S~d~~~Ld~~~~~I~~~ak~~g~~v~GPIpLPTk~~~~tvlrSPhv~k~srEqfE~R~HKRlIdi~~~   82 (106)
T CHL00135          3 IKQQQKIRIKLKSYNHSLLNSSCEKIIDTAKRTNATAVGPIPLPTKRRIYCVLRSPHVDKDSREHFEIRTHKRIIDIYNP   82 (106)
T ss_pred             CCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEEEEEECCCCCCCCHHHEEEEEEEEEEEECCC
T ss_conf             54377089999967788999999999999998499577983398478999786189889962564143673589982189


Q ss_pred             CHHHHHHHHCCCCCCCCEEEEEC
Q ss_conf             98999998647899984589989
Q gi|254780262|r   82 TPQTVDALMKLDIAAGVNVVIKL  104 (104)
Q Consensus        82 ~~~~~~~l~~~~lp~gV~i~i~~  104 (104)
T Consensus        83 ~~~ti~~l~~~~lp~gV~ieikl  105 (106)
T CHL00135         83 SSDTIDALMKLDLPSGVDIEIKL  105 (106)
T ss_pred             CHHHHHHHHCCCCCCCCEEEEEE
T ss_conf             98999998678899997799997